BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042373
(494 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 181/357 (50%), Positives = 218/357 (61%), Gaps = 68/357 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCF---RLGRRLPAEDSHSASDY---------------E 56
EIDPLDAFMN M E NN +P+EDS S DY +
Sbjct: 375 EIDPLDAFMNSMVLPEVEKLNNAAVSPTSNAVVPSEDSDS--DYGDLENNEDPLEEEDDD 432
Query: 57 LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIR 112
FMKR KK K + R I KIDY+ RKNFY + +E RM+P AYRKQL+LKI
Sbjct: 433 EFMKRVKKTKAE--RLSIVDHSKIDYKPFRKNFYIEVKESARMTPEEIAAYRKQLELKIH 490
Query: 113 EKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKT 172
K PKP+KTW QTGLTTKIL+T KLN+E P+ IQA A +I+SG D + I +TGSGKT
Sbjct: 491 GKDVPKPVKTWHQTGLTTKILDTIKKLNYERPMPIQAQALPIIMSGRDCIGIAKTGSGKT 550
Query: 173 LAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------- 210
LAF+LPMLRHI +QPPV+PG D P+GL+MAPT ELV+Q
Sbjct: 551 LAFVLPMLRHIKDQPPVMPG-DGPIGLIMAPTRELVQQIHSDIKKFAKVVGISCVPVYGG 609
Query: 211 --------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQ 253
+++R GRMID+LC +G KITNL RVTYLV+DEADRMFDMGFEPQ
Sbjct: 610 SGVAQQISELKRGAEVVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDMGFEPQ 669
Query: 254 ITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
ITRIVQN RPDRQ VLFS TFP +VEILAR+ V N + V R + K++ ++
Sbjct: 670 ITRIVQNTRPDRQTVLFSATFPRQVEILARR--VLNKPVEIQVGGRSVVNKDISQLV 724
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 128/209 (61%), Positives = 149/209 (71%), Gaps = 4/209 (1%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCNL IA SV ARGLD KELELVINFD PN YEDYVH ++ K A FIS+
Sbjct: 793 KSNVCNLLIATSVAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGSAITFISD 852
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVKA ELSE VV DDLKA+AD F+AKVN GL Q HGTG+GG +
Sbjct: 853 DDARYAPDLVKALELSEQVVPDDLKALADGFMAKVNQGLEQAHGTGYGGSGFKFNEEEDE 912
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
+ +KAQAKEYGF EDKSDS+D DEG RK+GGDIS Q ++A+IA IAAAS A S
Sbjct: 913 VRRAAKKAQAKEYGFEEDKSDSDDEDEGVRKAGGDISQQAALAQIAAIAAASKVGA-VSM 971
Query: 461 PSLISVAQLLPNGGPSIPLPGVLGLSVPG 489
PS + AQLLPNGG + L GVLGL++PG
Sbjct: 972 PSTVPAAQLLPNGGLPVSLSGVLGLTIPG 1000
>gi|222639930|gb|EEE68062.1| hypothetical protein OsJ_26071 [Oryza sativa Japonica Group]
Length = 938
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 207/550 (37%), Positives = 265/550 (48%), Gaps = 128/550 (23%)
Query: 10 PVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE---DSHSASDYELFMKRAKKKK 66
P+ + EIDPLDAFM+ M +PA D + S + KK +
Sbjct: 167 PMEEDEIDPLDAFMSSMVLPEVAKLETAVASMESMPASNMGDKNGKSAKDAVSNGDKKGQ 226
Query: 67 RDKNREIIKSKIKI-----------------DYQQLRKNFYTQAREITRMSPAYRKQLDL 109
+ I++ D + +++ T+ R+ RK L+L
Sbjct: 227 KKAMGRIMQGDDSDSDYDDDDDDEGGSKDEDDEEFMKRVKKTKERKWL----PTRKNLEL 282
Query: 110 KIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGS 169
K+ K PKPIKTW Q+GLT+K+L+T KL E P+ IQA A +I+SG D + I +TGS
Sbjct: 283 KVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGS 342
Query: 170 GKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------- 210
GKTLAF+LPMLRH+ +QPPVVPGD P+GL+MAPT ELV Q
Sbjct: 343 GKTLAFVLPMLRHVKDQPPVVPGD-GPIGLIMAPTRELVVQIHSDIKKFAKSLGINCVAI 401
Query: 211 -----------QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
+++RG RMID+LC + KITNL RVT+LV+DEADRMFDMGF
Sbjct: 402 YGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGF 461
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRV------------EILARKTNVCNLSIANSVRA 298
EPQITRIVQN RPDRQ VLFS FP +V EI +V N I V
Sbjct: 462 EPQITRIVQNTRPDRQTVLFSAIFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEV 521
Query: 299 R---------------------------------------------------GLDEKELE 307
R G D+ + E
Sbjct: 522 RPENERFLRLLELLGEWFDRGKILVFVHSQDKCDSLLKDLFQRGYPCLSLHGGKDQTDRE 581
Query: 308 LVINFDAPNDYEDYVHHCCQSWLKSCAFRFISEENAIYATDLVKAFELSELVVRDDLKAV 367
+ NDY V + K A FIS+E YA DL KA ELSE V DLK +
Sbjct: 582 STLADFKSNDYVHRVGRTGHAGRKGFAVTFISDEEERYAPDLAKALELSEQAVPQDLKGL 641
Query: 368 ADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKAQAKEYGFGEDKSDSE-DVD 426
AD F+AKV G Q HGTG+GG + + +KAQA+EYG+ EDKSDS+ D +
Sbjct: 642 ADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDEARRSAKKAQAREYGYEEDKSDSDSDEE 701
Query: 427 EGTRKSGGDI 436
G RK+GGD+
Sbjct: 702 GGVRKAGGDL 711
>gi|255578793|ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1173
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 183/383 (47%), Positives = 219/383 (57%), Gaps = 92/383 (24%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCF-------------------------------RLGRR 43
EIDPLDAFMN M E NN LGR
Sbjct: 375 EIDPLDAFMNSMVLPEVEKLNNAVITETVDENKVELKKKKEEGNEGEKLKKGSNKSLGRI 434
Query: 44 LPAEDSHSA-------------SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFY 90
+P EDS S D + FMKR KK K +K + SKI DY+ RKNFY
Sbjct: 435 IPGEDSDSDYGDLENDEGPLDDEDDDEFMKRVKKTKAEKLSVVDHSKI--DYKPFRKNFY 492
Query: 91 TQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVA 146
+ +EI+RM+P AYRKQL+LKI K PKP+KTW QTGL +KILET KLN+E P+
Sbjct: 493 IEVKEISRMAPEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLASKILETIKKLNYEKPMP 552
Query: 147 IQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGE 206
IQA A +I+SG D + I +TGSGKTLAF+LPMLRHI +QP V G D P+GL+MAPT E
Sbjct: 553 IQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPLVEAG-DGPIGLIMAPTRE 611
Query: 207 LVRQ------------------------------QVRR---------GRMIDLLCKNGVK 227
LV+Q +++R GRMID+LC +G K
Sbjct: 612 LVQQIHSDIKKFAKVLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGK 671
Query: 228 ITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNV 287
ITNL RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VEILARK V
Sbjct: 672 ITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK--V 729
Query: 288 CNLSIANSVRARGLDEKELELVI 310
N + V R + K++ ++
Sbjct: 730 LNKPVEIQVGGRSVVNKDITQLV 752
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/216 (58%), Positives = 153/216 (70%), Gaps = 6/216 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCNL IA S+ ARGLD KEL+LV+NFD PN YEDYVH ++ K CA FISE
Sbjct: 821 KSNVCNLLIATSIAARGLDVKELDLVVNFDVPNHYEDYVHRVGRTGRAGRKGCAITFISE 880
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E+A YA DLVKA ELSE VV +DLKA+AD F+ KVN GL Q HGTG+GG +
Sbjct: 881 EDARYAPDLVKALELSEQVVPEDLKALADGFMVKVNQGLEQAHGTGYGGSGFKFNEEEDE 940
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDIS-HQDSIA-KIATIAAASNSKASA 458
+ +KAQAKEYGF EDKSDSED DEG RK+GGDIS H ++A ++ IAAAS S SA
Sbjct: 941 KRIAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGDISRHNAALAQQLVAIAAASKSTTSA 1000
Query: 459 STPSLISVAQLLPNGGPSIPLPGVLGLSVPGGYSVV 494
TP+ I+ QLLP GG + LPGV+GL++PG +VV
Sbjct: 1001 -TPTPITAGQLLPPGGLPVSLPGVIGLTIPGPAAVV 1035
>gi|449525702|ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
42-like [Cucumis sativus]
Length = 1098
Score = 297 bits (761), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 182/393 (46%), Positives = 221/393 (56%), Gaps = 98/393 (24%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCF---------------------------------RLG 41
EIDPLDAFMN M E N +G
Sbjct: 318 EIDPLDAFMNSMVLPEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRRISNKSMG 377
Query: 42 RRLPAEDSHSASDY---------------ELFMKRAKKKKRDKNREIIKSKIKIDYQQLR 86
R +P EDS + DY + FMKR KK K +K + SK+ DYQ R
Sbjct: 378 RIIPGEDSDT--DYGDLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKM--DYQPFR 433
Query: 87 KNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHE 142
KNFY + +EI+RM+ AYRKQL+LKI K PKP+KTW QTGLT+KILET KLN+E
Sbjct: 434 KNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYE 493
Query: 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMA 202
P+ IQA A +++SG D + I +TGSGKTLAF+LPMLRHI +Q PVVPG D P+GL+MA
Sbjct: 494 KPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPG-DGPIGLIMA 552
Query: 203 PTGELVRQ------------------------------QVRR---------GRMIDLLCK 223
PT ELV+Q +++R GRMID+LC
Sbjct: 553 PTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCT 612
Query: 224 NGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
+ KITNL RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VEILAR
Sbjct: 613 SAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 672
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPN 316
K V N + V R + K++ ++ N
Sbjct: 673 K--VLNKPVEVQVGGRSVVNKDIAQLVEVRPEN 703
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 156/215 (72%), Gaps = 6/215 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCNL IA S+ ARGLD KELELVINFD PN YEDYVH ++ K CA FI+E
Sbjct: 746 KSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAE 805
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E++ YA DLVKA ELSE VV DDL+A+ADSF+AKVN GL Q HGTG+GG +
Sbjct: 806 EDSRYAPDLVKALELSEQVVPDDLRALADSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDE 865
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASN-SKASAS 459
+ +KAQAKEYGF EDKSDSED D+G RK+GGDIS Q ++A+IA IAAA+ S S +
Sbjct: 866 VRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQIAAIAAATKVSAVSIT 925
Query: 460 TPSLISVAQLLPNGGPSIPLPGVLGLSVPGGYSVV 494
TPS S AQLLPNGG + LPGVLGL++PG V+
Sbjct: 926 TPS--SAAQLLPNGGLPVSLPGVLGLTIPGTMPVI 958
>gi|224083374|ref|XP_002307002.1| predicted protein [Populus trichocarpa]
gi|222856451|gb|EEE93998.1| predicted protein [Populus trichocarpa]
Length = 895
Score = 297 bits (760), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 182/385 (47%), Positives = 216/385 (56%), Gaps = 94/385 (24%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCF---------------------------------RLG 41
EIDPLDAFMN M E NN LG
Sbjct: 101 EIDPLDAFMNSMVLPEVEMLNNAVVTQTADDNKADSKKKDKNDEGINGGQRKKGSHKSLG 160
Query: 42 RRLPAEDSHSA-------------SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKN 88
R +P EDS S D + FMKR KK K +K + SKI DY RKN
Sbjct: 161 RIIPGEDSDSDHGDLENSEVPLEDEDDDEFMKRVKKTKAEKLSIVDHSKI--DYSPFRKN 218
Query: 89 FYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENP 144
FY + +EI RM+P AYRK L+LKI K PKPIKTW QTGLT+KILET KLN+E P
Sbjct: 219 FYIEVKEILRMTPEEVTAYRKLLELKIHGKDVPKPIKTWHQTGLTSKILETIKKLNYEKP 278
Query: 145 VAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPT 204
+ IQA A +I+SG D + I +TGSGKTLAF+LPMLRHI +QPPV G + P+GL+MAPT
Sbjct: 279 MTIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVEAG-EGPIGLIMAPT 337
Query: 205 GELVRQ------------------------------QVRR---------GRMIDLLCKNG 225
ELV+Q +++R GRMID+LC +G
Sbjct: 338 RELVQQIHSDIRKFTKALGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSG 397
Query: 226 VKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
KITNL RVTYLV+DEADRMFDMGFEPQITRIVQNIRPD Q VLFS TFP +VE LARK
Sbjct: 398 GKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDHQTVLFSATFPRQVETLARK- 456
Query: 286 NVCNLSIANSVRARGLDEKELELVI 310
V N + V R + K++ ++
Sbjct: 457 -VLNKPVEIQVGGRSVVNKDINQLV 480
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 131/199 (65%), Gaps = 3/199 (1%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCNL IA SV ARGLD K+LELVIN+D PN YEDYVH ++ K CA F SE
Sbjct: 549 KSNVCNLLIATSVAARGLDVKDLELVINYDVPNHYEDYVHRVGRTGRAGRKGCAITFFSE 608
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVKA ELSE VV DLKA+AD F+ KVN GL Q HGTG+GG +
Sbjct: 609 DDARYAPDLVKALELSEQVVPQDLKALADGFMVKVNQGLEQAHGTGYGGSGFKFNEEEDE 668
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
+ +KAQA+EYGF E+KSDSED DE RK+GGDIS Q ++A+ AA + +
Sbjct: 669 KRMAAKKAQAREYGFEEEKSDSEDEDEVVRKAGGDISQQTALAQQIAALAAVSKIPAPVA 728
Query: 461 PSLISVAQLLPNGGPSIPL 479
P+ SV Q L NGG +PL
Sbjct: 729 PTPHSVTQFLSNGGLPVPL 747
>gi|449439149|ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
[Cucumis sativus]
Length = 1040
Score = 297 bits (760), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 182/393 (46%), Positives = 221/393 (56%), Gaps = 98/393 (24%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCF---------------------------------RLG 41
EIDPLDAFMN M E N +G
Sbjct: 240 EIDPLDAFMNSMVLPEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRRISNKSMG 299
Query: 42 RRLPAEDSHSASDY---------------ELFMKRAKKKKRDKNREIIKSKIKIDYQQLR 86
R +P EDS + DY + FMKR KK K +K + SK+ DYQ R
Sbjct: 300 RIIPGEDSDT--DYGDLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKM--DYQPFR 355
Query: 87 KNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHE 142
KNFY + +EI+RM+ AYRKQL+LKI K PKP+KTW QTGLT+KILET KLN+E
Sbjct: 356 KNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYE 415
Query: 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMA 202
P+ IQA A +++SG D + I +TGSGKTLAF+LPMLRHI +Q PVVPG D P+GL+MA
Sbjct: 416 KPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPG-DGPIGLIMA 474
Query: 203 PTGELVRQ------------------------------QVRR---------GRMIDLLCK 223
PT ELV+Q +++R GRMID+LC
Sbjct: 475 PTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCT 534
Query: 224 NGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
+ KITNL RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VEILAR
Sbjct: 535 SAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 594
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPN 316
K V N + V R + K++ ++ N
Sbjct: 595 K--VLNKPVEVQVGGRSVVNKDIAQLVEVRPEN 625
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 156/215 (72%), Gaps = 6/215 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCNL IA S+ ARGLD KELELVINFD PN YEDYVH ++ K CA FI+E
Sbjct: 688 KSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAE 747
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E++ YA DLVKA ELSE VV DDL+A+ADSF+AKVN GL Q HGTG+GG +
Sbjct: 748 EDSRYAPDLVKALELSEQVVPDDLRALADSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDE 807
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASN-SKASAS 459
+ +KAQAKEYGF EDKSDSED D+G RK+GGDIS Q ++A+IA IAAA+ S S +
Sbjct: 808 VRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQIAAIAAATKVSAVSIT 867
Query: 460 TPSLISVAQLLPNGGPSIPLPGVLGLSVPGGYSVV 494
TPS S AQLLPNGG + LPGVLGL++PG V+
Sbjct: 868 TPS--SAAQLLPNGGLPVSLPGVLGLTIPGTMPVI 900
>gi|449439147|ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
[Cucumis sativus]
Length = 1118
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 182/393 (46%), Positives = 221/393 (56%), Gaps = 98/393 (24%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCF---------------------------------RLG 41
EIDPLDAFMN M E N +G
Sbjct: 318 EIDPLDAFMNSMVLPEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRRISNKSMG 377
Query: 42 RRLPAEDSHSASDY---------------ELFMKRAKKKKRDKNREIIKSKIKIDYQQLR 86
R +P EDS + DY + FMKR KK K +K + SK+ DYQ R
Sbjct: 378 RIIPGEDSDT--DYGDLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKM--DYQPFR 433
Query: 87 KNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHE 142
KNFY + +EI+RM+ AYRKQL+LKI K PKP+KTW QTGLT+KILET KLN+E
Sbjct: 434 KNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYE 493
Query: 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMA 202
P+ IQA A +++SG D + I +TGSGKTLAF+LPMLRHI +Q PVVPG D P+GL+MA
Sbjct: 494 KPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPG-DGPIGLIMA 552
Query: 203 PTGELVRQ------------------------------QVRR---------GRMIDLLCK 223
PT ELV+Q +++R GRMID+LC
Sbjct: 553 PTRELVQQIHSDIKKFSKVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCT 612
Query: 224 NGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
+ KITNL RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VEILAR
Sbjct: 613 SAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 672
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPN 316
K V N + V R + K++ ++ N
Sbjct: 673 K--VLNKPVEVQVGGRSVVNKDIAQLVEVRPEN 703
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 156/215 (72%), Gaps = 6/215 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCNL IA S+ ARGLD KELELVINFD PN YEDYVH ++ K CA FI+E
Sbjct: 766 KSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAE 825
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E++ YA DLVKA ELSE VV DDL+A+ADSF+AKVN GL Q HGTG+GG +
Sbjct: 826 EDSRYAPDLVKALELSEQVVPDDLRALADSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDE 885
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASN-SKASAS 459
+ +KAQAKEYGF EDKSDSED D+G RK+GGDIS Q ++A+IA IAAA+ S S +
Sbjct: 886 VRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQIAAIAAATKVSAVSIT 945
Query: 460 TPSLISVAQLLPNGGPSIPLPGVLGLSVPGGYSVV 494
TPS S AQLLPNGG + LPGVLGL++PG V+
Sbjct: 946 TPS--SAAQLLPNGGLPVSLPGVLGLTIPGTMPVI 978
>gi|224065635|ref|XP_002301895.1| predicted protein [Populus trichocarpa]
gi|222843621|gb|EEE81168.1| predicted protein [Populus trichocarpa]
Length = 1112
Score = 294 bits (752), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 185/398 (46%), Positives = 220/398 (55%), Gaps = 108/398 (27%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCF---------------------------------RLG 41
EIDPLDAFMN M E N+ LG
Sbjct: 318 EIDPLDAFMNSMVLPEVEKLNSTLVTHTADDNKTDLKNKDKKEERINGEQRKKGSHKSLG 377
Query: 42 RRLPAEDSHSASDY---------------ELFMKRAKKKKRDKNREIIKSKIKIDYQQLR 86
R +P EDS S DY + FMKR KK K +K + SKI DY R
Sbjct: 378 RIVPGEDSDS--DYGDLENGEDPLEEEDDDEFMKRVKKTKAEKLSIVDHSKI--DYNPFR 433
Query: 87 KNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHE 142
KNFY + +EI+RM+P A RK+L+LK+ K PKPIKTW QTGLT+KILET KLN+E
Sbjct: 434 KNFYIEVKEISRMTPEEVVACRKELELKLHGKDVPKPIKTWHQTGLTSKILETIKKLNYE 493
Query: 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMA 202
P+ IQA A +I+SG D + I +TGSGKTLAF+LPMLRHI +QPPV G + P+GLVMA
Sbjct: 494 KPMTIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVEAG-EGPIGLVMA 552
Query: 203 PTGELVRQ------------------------------QVRR---------GRMIDLLCK 223
PT ELV+Q +++R GRMID+LC
Sbjct: 553 PTRELVQQIHSDIKKFAKALSIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCT 612
Query: 224 NGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
+G KITNL RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VE LAR
Sbjct: 613 SGGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLAR 672
Query: 284 KT------------NVCNLSIANSVRARGLDEKELELV 309
K +V N I V R D++ L L+
Sbjct: 673 KVLNKPVEIQVGGRSVVNKDITQLVELRTEDQRWLRLL 710
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/210 (55%), Positives = 139/210 (66%), Gaps = 4/210 (1%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
KTNVCNL IA SV ARGLD K+LELVIN+DAPN YEDYVH ++ K CA FISE
Sbjct: 766 KTNVCNLMIATSVAARGLDVKDLELVINYDAPNHYEDYVHRVGRTGRAGRKGCAITFISE 825
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVKA ELSE VV DLKA+AD F+AKVN GL Q HGTG+GG +
Sbjct: 826 DDARYAPDLVKALELSEQVVPQDLKALADGFMAKVNQGLEQAHGTGYGGSGFKFNEEEDE 885
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
+ +KAQAKEYG+ ++KSDSED DE RKS GD+S Q ++A+ AA + +
Sbjct: 886 KRMAAKKAQAKEYGYEDEKSDSEDEDEVVRKSVGDVSQQTALAQQIAALAAVSKVPMPAP 945
Query: 461 PSLISVAQLLPNGG-PSIPLPGVLGLSVPG 489
P SVAQLL NGG P P PG +SV G
Sbjct: 946 PISHSVAQLLSNGGLPVPPNPGPAVVSVTG 975
>gi|356497367|ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
max]
Length = 1104
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 179/390 (45%), Positives = 220/390 (56%), Gaps = 92/390 (23%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCF--------------------------------RLGR 42
EIDPLDAFMN M E NN +GR
Sbjct: 332 EIDPLDAFMNSMVLPEVEKLNNAVTSSLSDKAIDVKPKDKGNGQNRGAQSRKGSNKSIGR 391
Query: 43 RLPAEDSHSA------------SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFY 90
+P E+S S D + FMKR KK K +K + SKI DY+ +KNFY
Sbjct: 392 IIPGEESDSDYADDEVEKDPLDEDDDEFMKRVKKTKAEKLSLVDHSKI--DYEPFKKNFY 449
Query: 91 TQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVA 146
+ +EI++M+P YRKQL+LKI K PKPIK+W QTGL +KILET K+N E P+
Sbjct: 450 IEVKEISKMTPEEAAVYRKQLELKIHGKDVPKPIKSWHQTGLPSKILETIKKMNFEMPMP 509
Query: 147 IQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGE 206
IQA A +I+SG D + I +TGSGKTLAF+LPMLRHI +QPPVV G D P+GL+MAPT E
Sbjct: 510 IQAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAG-DGPIGLIMAPTRE 568
Query: 207 LVRQ------------------------------QVRR---------GRMIDLLCKNGVK 227
LV+Q +++R GRMID+LC + K
Sbjct: 569 LVQQIHSDIKKFAKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGK 628
Query: 228 ITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNV 287
ITNL RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VEILARK V
Sbjct: 629 ITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK--V 686
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPND 317
N + V R + K++ ++ N+
Sbjct: 687 LNKPVEIQVGGRSVVNKDITQLVEVRPDNE 716
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 136/204 (66%), Gaps = 7/204 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCNL +A S+ ARGLD KELELVINFD PN YEDYVH ++ K CA FISE
Sbjct: 778 KSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISE 837
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A YA DL+KA ELSE +V +DLKA+A SF+AKVN GL Q HGTG+GG +
Sbjct: 838 EEARYAPDLLKALELSEQIVPNDLKALAGSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDE 897
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
K +KAQAKEYGF E+KSDSED DEG RK+GGDIS + A+I IAA + + T
Sbjct: 898 VRKAAKKAQAKEYGFEEEKSDSEDEDEGIRKAGGDISQHSAFAQI--IAATKGNAPALPT 955
Query: 461 PSLISVAQLLPNGGPSIPLPGVLG 484
P L+ Q+LP G +PLP G
Sbjct: 956 PILLPSLQVLP--GTGLPLPANDG 977
>gi|356538821|ref|XP_003537899.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
max]
Length = 1107
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 177/390 (45%), Positives = 219/390 (56%), Gaps = 92/390 (23%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCF--------------------------------RLGR 42
EIDPLDAFMN M E NN +GR
Sbjct: 335 EIDPLDAFMNSMVLPEVEKLNNAVTSSLSGKAIDVKPKDKGNEQNRGAQSRKVSNKSIGR 394
Query: 43 RLPAEDSHSA------------SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFY 90
+P E+S S D + FMKR KK K +K + SKI Y+ +KNFY
Sbjct: 395 IIPGEESDSDYADDEVEKDPLDEDDDEFMKRVKKTKAEKLSLVDHSKIV--YEPFKKNFY 452
Query: 91 TQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVA 146
+ +E+++M+P YRKQL+LKI K PKPIK+W QTGL +KILET K+N E P+
Sbjct: 453 IEVKEVSKMTPEESAVYRKQLELKIHGKDVPKPIKSWHQTGLASKILETIKKMNFEKPMP 512
Query: 147 IQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGE 206
IQA A +I+SG D + I +TGSGKTLAF+LPMLRHI +QPPVV G D P+GL+MAPT E
Sbjct: 513 IQAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAG-DGPIGLIMAPTRE 571
Query: 207 LVRQ------------------------------QVRR---------GRMIDLLCKNGVK 227
LV+Q +++R GRMID+LC + K
Sbjct: 572 LVQQIHSDIKKFAKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGK 631
Query: 228 ITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNV 287
ITNL RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VEILARK V
Sbjct: 632 ITNLHRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK--V 689
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPND 317
N + V R + K++ ++ N+
Sbjct: 690 LNKPVEIQVGGRSVVNKDITQLVEVRPDNE 719
Score = 171 bits (432), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 134/204 (65%), Gaps = 7/204 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCNL +A S+ ARGLD KELELVINFD PN YEDYVH ++ K CA FISE
Sbjct: 781 KSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISE 840
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A YA DL+KA ELSE V +DLKA+A SF+AKVN GL Q HGTG+GG +
Sbjct: 841 EEARYAPDLLKALELSEQTVPNDLKALAGSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDE 900
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
K +KAQAKEYGF E+KSDSED DEG RK+GGDIS + A+I IAA + + T
Sbjct: 901 VRKAAKKAQAKEYGFEEEKSDSEDEDEGIRKAGGDISQHSAFAQI--IAATKGNVPALPT 958
Query: 461 PSLISVAQLLPNGGPSIPLPGVLG 484
P L+ +LP G +PLP G
Sbjct: 959 PMLLPSLPVLP--GTGLPLPANEG 980
>gi|357445503|ref|XP_003593029.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
gi|355482077|gb|AES63280.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
Length = 1148
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 176/389 (45%), Positives = 217/389 (55%), Gaps = 92/389 (23%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFR--------------------------------LGR 42
EIDPLDAFMN M E NN +GR
Sbjct: 381 EIDPLDAFMNSMVLPEVEKLNNAVNSAPPDKASDLNPKDKGAESRNGGQSRKGSNKSIGR 440
Query: 43 RLPAEDSHSA------------SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFY 90
+P E+S S D + FMKR KK K +K + SKI DY RKNFY
Sbjct: 441 IIPGEESDSDYADPEVEGDPLDEDDDEFMKRVKKTKAEKLSIVDHSKI--DYIPFRKNFY 498
Query: 91 TQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVA 146
+ +E+++M+ YRKQL+LKI K PKP+K+W QTGLT+KIL+T K N E P+
Sbjct: 499 IEVKEVSKMTVEEVAFYRKQLELKIHGKDVPKPVKSWNQTGLTSKILDTIKKANFEKPMP 558
Query: 147 IQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGE 206
IQA A +I+SG D + + +TGSGKTLAF+LPMLRHI +QPPVV G D P+GL+MAPT E
Sbjct: 559 IQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVG-DGPIGLIMAPTRE 617
Query: 207 LVRQ------------------------------QVRR---------GRMIDLLCKNGVK 227
LV+Q +++R GRMID+LC + K
Sbjct: 618 LVQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGK 677
Query: 228 ITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNV 287
ITNL RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VEILARK V
Sbjct: 678 ITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARK--V 735
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPN 316
N + V R + K++ ++ N
Sbjct: 736 LNKPVEIQVGGRSVVNKDIAQLVEVRPEN 764
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 127/198 (64%), Gaps = 25/198 (12%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCNL +A S+ ARGLD KELELVINFD PN YEDYVH ++ K CA FISE
Sbjct: 827 KSNVCNLLVATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISE 886
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E+A YA DLVKA ELSE +V DDLK++A+ F+AKV GL Q HGTG+GG +
Sbjct: 887 EDARYAPDLVKALELSEQIVPDDLKSLAEGFMAKVTQGLEQAHGTGYGGTGFKFNEEEDE 946
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
+ +KAQAKEYGF EDKSDSED DEG RK+GGDIS T
Sbjct: 947 VRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAGGDISQH-------------------HT 987
Query: 461 PSLISVAQLLPNGG-PSI 477
P IS AQL+P GG PS+
Sbjct: 988 P--ISAAQLIPIGGIPSV 1003
>gi|15232722|ref|NP_187573.1| DEAD-box ATP-dependent RNA helicase 45 [Arabidopsis thaliana]
gi|75337164|sp|Q9SF41.1|RH45_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 45
gi|6682258|gb|AAF23310.1|AC016661_35 putative RNA helicase [Arabidopsis thaliana]
gi|332641267|gb|AEE74788.1| DEAD-box ATP-dependent RNA helicase 45 [Arabidopsis thaliana]
Length = 989
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 174/381 (45%), Positives = 217/381 (56%), Gaps = 90/381 (23%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNC-------FR------------------LGRRLPAEDS 49
EIDPLDAFMN M E +N F+ LGR + EDS
Sbjct: 250 EIDPLDAFMNTMVLPEVEKLSNIVIDGILDFKMNGKETGDQAKKGFNKAALGRIIQGEDS 309
Query: 50 HSASDYE---------------LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAR 94
S DY FMKR KK K +K + SKI +Y+ RKNFY + +
Sbjct: 310 DS--DYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKI--EYEPFRKNFYIEVK 365
Query: 95 EITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAP 150
+I+RM+ AYRK+L+LK+ K P+PI+ W QTGLT+KIL+T KLN+E P+ IQA
Sbjct: 366 DISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQ 425
Query: 151 ASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ 210
A +I+SG D + + +TGSGKTL F+LPMLRHI +QPPV GD P+GLVMAPT ELV+Q
Sbjct: 426 ALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGD-GPIGLVMAPTRELVQQ 484
Query: 211 ------------------------------QVRRG---------RMIDLLCKNGVKITNL 231
+++RG RMID+LC + KITNL
Sbjct: 485 IYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNL 544
Query: 232 TRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLS 291
RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VE LARK V N
Sbjct: 545 RRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARK--VLNKP 602
Query: 292 IANSVRARGLDEKELELVINF 312
+ V R + K++ ++
Sbjct: 603 VEIQVGGRSVVNKDITQLVEI 623
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/202 (53%), Positives = 134/202 (66%), Gaps = 9/202 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K++VCNL IA SV ARGLD KELELV+NFDAPN YEDYVH ++ K CA FISE
Sbjct: 661 KSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 720
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVKA ELSE V DD+KAVA+ F+AKV G+ Q HGTG+GG +
Sbjct: 721 DDAKYAPDLVKALELSEQPVPDDVKAVAEGFMAKVKQGIEQAHGTGYGGSGFKFNEEEDE 780
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
K +KAQAKEYGF E+KSDSED ++ RK+GGDIS Q +I A+ + A++
Sbjct: 781 VRKAAKKAQAKEYGFEEEKSDSEDENDVVRKAGGDISQQ----QITLAQIAAIASAASKA 836
Query: 461 PSLISVAQLLPNGGPSIPLPGV 482
P ++ QLLPNGG PG+
Sbjct: 837 P--VTANQLLPNGGGLATEPGI 856
>gi|110739876|dbj|BAF01843.1| putative RNA helicase [Arabidopsis thaliana]
Length = 632
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 174/381 (45%), Positives = 217/381 (56%), Gaps = 90/381 (23%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNC-------FR------------------LGRRLPAEDS 49
EIDPLDAFMN M E +N F+ LGR + EDS
Sbjct: 216 EIDPLDAFMNTMVLPEVEKLSNIVIDGILDFKMNGKETGDQAKKGFNKAALGRIIQGEDS 275
Query: 50 HSASDYE---------------LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAR 94
S DY FMKR KK K +K + SKI +Y+ RKNFY + +
Sbjct: 276 DS--DYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKI--EYEPFRKNFYIEVK 331
Query: 95 EITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAP 150
+I+RM+ AYRK+L+LK+ K P+PI+ W QTGLT+KIL+T KLN+E P+ IQA
Sbjct: 332 DISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQ 391
Query: 151 ASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ 210
A +I+SG D + + +TGSGKTL F+LPMLRHI +QPPV GD P+GLVMAPT ELV+Q
Sbjct: 392 ALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGD-GPIGLVMAPTRELVQQ 450
Query: 211 ------------------------------QVRRG---------RMIDLLCKNGVKITNL 231
+++RG RMID+LC + KITNL
Sbjct: 451 IYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNL 510
Query: 232 TRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLS 291
RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VE LARK V N
Sbjct: 511 RRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARK--VLNKP 568
Query: 292 IANSVRARGLDEKELELVINF 312
+ V R + K++ ++
Sbjct: 569 VEIQVGGRSVVNKDITQLVEI 589
>gi|297833724|ref|XP_002884744.1| hypothetical protein ARALYDRAFT_317764 [Arabidopsis lyrata subsp.
lyrata]
gi|297330584|gb|EFH61003.1| hypothetical protein ARALYDRAFT_317764 [Arabidopsis lyrata subsp.
lyrata]
Length = 930
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 167/344 (48%), Positives = 204/344 (59%), Gaps = 72/344 (20%)
Query: 10 PVVQIEIDPLDAFMND-------------MECSFAEHPNNCFRLGRRLPAEDSHS----- 51
P + EIDPLDA+MN +E + LGR + EDS S
Sbjct: 198 PEEEEEIDPLDAYMNSKVLPEVEKLRSSSLETGDQQKEGLNKSLGRIIQGEDSDSDYSEP 257
Query: 52 --------ASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP-- 101
D E FMKR KK K +K + SKI +Y+ RKNFY + ++I+RM+
Sbjct: 258 KSDDDPSLEEDDEEFMKRVKKTKAEKLSLVDHSKI--EYEPFRKNFYIEVKDISRMTQDV 315
Query: 102 --AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGL 159
AYRK+L+LK+ K P+PIK W QTGLT+KIL+T KLN+ P+ IQA A +I+SG
Sbjct: 316 VNAYRKELELKVHGKDVPRPIKAWHQTGLTSKILDTLKKLNYVKPMPIQAQALPIIMSGR 375
Query: 160 DSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------- 210
D + I TGSGKTLAF+LPMLRHI +QPP+ G D P+GLVMAPT ELV+Q
Sbjct: 376 DCIGIANTGSGKTLAFVLPMLRHIKDQPPIEAG-DGPIGLVMAPTRELVQQIHSDIKRFA 434
Query: 211 ---------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLD 240
+++R GRMID+LC + KITNL RVTYLV+D
Sbjct: 435 KALGVRCVAVYGGSGVAQQINELKRGTEIVVCTPGRMIDVLCTSSGKITNLRRVTYLVMD 494
Query: 241 EADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
EADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VE LARK
Sbjct: 495 EADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARK 538
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 128/202 (63%), Gaps = 9/202 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K NVCNL IA SV ARGLD KELELV+NFD PN YEDYVH ++ K CA FISE
Sbjct: 602 KNNVCNLLIATSVAARGLDVKELELVVNFDPPNHYEDYVHRVGRTGRAGRKGCAVTFISE 661
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVKA ELSE V DD+KAVAD F+AKV G Q HGTG+GG +
Sbjct: 662 DDAKYAPDLVKALELSEQPVPDDVKAVADGFMAKVKQGTEQAHGTGYGGSGFKFNEDDEE 721
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
K +KAQAKEYGF E++SDSED ++ R +G DIS Q + A+ S A+++
Sbjct: 722 VRKAAKKAQAKEYGFEEEESDSEDENDVVRNAGDDISQQQA----PFAQIAAISAAASNA 777
Query: 461 PSLISVAQLLPNGGPSIPLPGV 482
P ++ QL PNGG PGV
Sbjct: 778 P--VTANQLPPNGGGLATEPGV 797
>gi|357130377|ref|XP_003566825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like
[Brachypodium distachyon]
Length = 1045
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/270 (55%), Positives = 182/270 (67%), Gaps = 46/270 (17%)
Query: 58 FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIRE 113
F+KR KK K +K +I KIDYQ RKNFY + ++ITRMS +YRK L+LK+R
Sbjct: 357 FIKRVKKTKAEK--LVIVDHSKIDYQPFRKNFYIEVKDITRMSAEDVASYRKLLELKVRG 414
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K PKPIKTW Q+GLT+K+L+T KL E P++IQA A +I+SG D + + +TGSGKTL
Sbjct: 415 KDVPKPIKTWIQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGVAKTGSGKTL 474
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
AF+LPMLRH+ +QPPVVPG D P+GL+MAPT ELV Q
Sbjct: 475 AFVLPMLRHVKDQPPVVPG-DGPIGLIMAPTRELVVQIYSDIKKFSKVLGINCVPIYGGS 533
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
+++R GRMID+LC + KITNL RVT+LVLDEADRMFDMGFEPQI
Sbjct: 534 GVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVLDEADRMFDMGFEPQI 593
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
TRIVQN RPDRQ VLFS TFP +VEILARK
Sbjct: 594 TRIVQNTRPDRQTVLFSATFPRQVEILARK 623
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 103/157 (65%), Gaps = 4/157 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCN+ IA SV +RGLD K+LELV+N+D N YEDYVH ++ K CA F+SE
Sbjct: 716 KSNVCNVLIATSVASRGLDVKDLELVVNYDVTNHYEDYVHRVGRTGRAGRKGCAVTFVSE 775
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E YA DLVKA ELSE V +DLKA+AD F++KV G Q HGTG+GG +
Sbjct: 776 EEERYAPDLVKALELSEQAVPEDLKALADRFMSKVKQGTEQAHGTGYGGSGFKFNEEEDE 835
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEG-TRKSGGDI 436
K +KAQA+EYG+ EDKSDS+ ++G RK D+
Sbjct: 836 ARKTAKKAQAREYGYEEDKSDSDSDEDGVVRKGAADV 872
>gi|115474897|ref|NP_001061045.1| Os08g0159900 [Oryza sativa Japonica Group]
gi|75328149|sp|Q84UQ1.1|RH42_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|29467560|dbj|BAC66730.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|37806159|dbj|BAC99664.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|113623014|dbj|BAF22959.1| Os08g0159900 [Oryza sativa Japonica Group]
gi|218200507|gb|EEC82934.1| hypothetical protein OsI_27901 [Oryza sativa Indica Group]
gi|222639953|gb|EEE68085.1| hypothetical protein OsJ_26125 [Oryza sativa Japonica Group]
Length = 1049
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/274 (55%), Positives = 183/274 (66%), Gaps = 46/274 (16%)
Query: 54 DYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDL 109
D E FMKR KK K +K + SKI DYQ RKNFY + ++IT+M+ AYRKQL+L
Sbjct: 355 DDEEFMKRVKKTKAEKLAIVDHSKI--DYQPFRKNFYIEVKDITKMAAEEVAAYRKQLEL 412
Query: 110 KIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGS 169
K+ K PKPIKTW Q+GLT+K+L+T KL E P++IQA A +I+SG D + I +TGS
Sbjct: 413 KVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGS 472
Query: 170 GKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------- 210
GKTLAF+LPMLRH+ +QP VVPG D P+GL+MAPT ELV Q
Sbjct: 473 GKTLAFVLPMLRHVKDQPAVVPG-DGPIGLIMAPTRELVVQIHSDIKKFSKALGINCVAI 531
Query: 211 -----------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
+++R GRMID+LC + KITNL RVT+LV+DEADRMFDMGF
Sbjct: 532 YGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGF 591
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
EPQITRIVQN RPDRQ VLFS TFP +VEILARK
Sbjct: 592 EPQITRIVQNTRPDRQTVLFSATFPRQVEILARK 625
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 105/157 (66%), Gaps = 4/157 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVC+L IA SV ARGLD KELELV+N+D PN YEDYVH ++ K A FISE
Sbjct: 718 KSNVCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISE 777
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E YA DLVKA ELSE V +DLK +AD F+AKV G Q HGTG+GG +
Sbjct: 778 EEERYAPDLVKALELSEQAVPEDLKGLADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDE 837
Query: 401 RGKQLRKAQAKEYGFGEDKSDSE-DVDEGTRKSGGDI 436
K +KAQA+EYG+ EDKSDS+ D + G RK+GGD+
Sbjct: 838 ARKSAKKAQAREYGYEEDKSDSDSDEEGGVRKAGGDL 874
>gi|15218071|ref|NP_173516.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA helicases [Arabidopsis thaliana]
gi|332191919|gb|AEE30040.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 1166
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 220/394 (55%), Gaps = 94/394 (23%)
Query: 11 VVQIEIDPLDAFMNDME-------CSFA--------------------EHPNNCFR--LG 41
V + EIDPLDAFMN M C+ A + P F LG
Sbjct: 375 VDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRPKKGFNKALG 434
Query: 42 RRLPAEDSHSASDYE---------------LFMKRAKKKKRDKNREIIKSKIKIDYQQLR 86
R + EDS S DY FMKR KK K +K + SKI +Y+ R
Sbjct: 435 RIIQGEDSDS--DYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKI--EYEPFR 490
Query: 87 KNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHE 142
KNFY + ++I+RM+ YRK+L+LK+ K P+PIK W QTGLT+KIL+T KLN+E
Sbjct: 491 KNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYE 550
Query: 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMA 202
P+ IQ A +I+SG D + + +TGSGKTL F+LPMLRHI +QPPV GD P+GLVMA
Sbjct: 551 KPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGD-GPIGLVMA 609
Query: 203 PTGELVRQ------------------------------QVRRG---------RMIDLLCK 223
PT ELV+Q +++RG RMID+LC
Sbjct: 610 PTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCT 669
Query: 224 NGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
+ KITNL RVT+LV+DEADRMFDMGFEPQITRI+QNIRP+RQ VLFS TFP +VE LAR
Sbjct: 670 SSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLAR 729
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPND 317
K V N + V R + K++ ++ +D
Sbjct: 730 K--VLNKPVEIQVGGRSVVNKDITQLVEVRPESD 761
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 143/210 (68%), Gaps = 5/210 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K +VCNL IA SV ARGLD KELELV+NFDAPN YEDYVH ++ K CA FISE
Sbjct: 823 KNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 882
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVKA ELSE V DDLKA+AD F+ KV G+ Q HGTG+GG +
Sbjct: 883 DDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQGIEQAHGTGYGGSGFKFNEEEEE 942
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKS-GGDISHQD-SIAKIATIAAASNSKASA 458
K +KAQAKEYGF EDKSDSED ++ RK+ GG+IS Q + A+IA IAAA+ + A+A
Sbjct: 943 VRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQQQATFAQIAAIAAAAKAAAAA 1002
Query: 459 STPSLISVAQLLPNGGPSIPLPGVLGLSVP 488
+ ++ QLL NGG +PGVL ++VP
Sbjct: 1003 PVSAPVTANQLLANGGGLAAMPGVLPVTVP 1032
>gi|145323964|ref|NP_001077571.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|332191920|gb|AEE30041.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 828
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 172/390 (44%), Positives = 218/390 (55%), Gaps = 94/390 (24%)
Query: 15 EIDPLDAFMNDME-------CSFA--------------------EHPNNCFR--LGRRLP 45
EIDPLDAFMN M C+ A + P F LGR +
Sbjct: 41 EIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRPKKGFNKALGRIIQ 100
Query: 46 AEDSHSASDYE---------------LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFY 90
EDS S DY FMKR KK K +K + SKI +Y+ RKNFY
Sbjct: 101 GEDSDS--DYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKI--EYEPFRKNFY 156
Query: 91 TQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVA 146
+ ++I+RM+ YRK+L+LK+ K P+PIK W QTGLT+KIL+T KLN+E P+
Sbjct: 157 IEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMP 216
Query: 147 IQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGE 206
IQ A +I+SG D + + +TGSGKTL F+LPMLRHI +QPPV GD P+GLVMAPT E
Sbjct: 217 IQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGD-GPIGLVMAPTRE 275
Query: 207 LVRQ------------------------------QVRRG---------RMIDLLCKNGVK 227
LV+Q +++RG RMID+LC + K
Sbjct: 276 LVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGK 335
Query: 228 ITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNV 287
ITNL RVT+LV+DEADRMFDMGFEPQITRI+QNIRP+RQ VLFS TFP +VE LARK V
Sbjct: 336 ITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARK--V 393
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPND 317
N + V R + K++ ++ +D
Sbjct: 394 LNKPVEIQVGGRSVVNKDITQLVEVRPESD 423
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 143/210 (68%), Gaps = 5/210 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K +VCNL IA SV ARGLD KELELV+NFDAPN YEDYVH ++ K CA FISE
Sbjct: 485 KNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 544
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVKA ELSE V DDLKA+AD F+ KV G+ Q HGTG+GG +
Sbjct: 545 DDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQGIEQAHGTGYGGSGFKFNEEEEE 604
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKS-GGDISHQD-SIAKIATIAAASNSKASA 458
K +KAQAKEYGF EDKSDSED ++ RK+ GG+IS Q + A+IA IAAA+ + A+A
Sbjct: 605 VRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQQQATFAQIAAIAAAAKAAAAA 664
Query: 459 STPSLISVAQLLPNGGPSIPLPGVLGLSVP 488
+ ++ QLL NGG +PGVL ++VP
Sbjct: 665 PVSAPVTANQLLANGGGLAAMPGVLPVTVP 694
>gi|297845068|ref|XP_002890415.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
gi|297336257|gb|EFH66674.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
Length = 827
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 171/390 (43%), Positives = 215/390 (55%), Gaps = 94/390 (24%)
Query: 15 EIDPLDAFMNDMECSFAE---------------------------HPNNCFR--LGRRLP 45
EIDPLDAFMN M E P F LGR +
Sbjct: 41 EIDPLDAFMNTMVLPEVEKLSNGAPPPAVNDGILDSKMNGKESDDQPKKGFNKALGRIIQ 100
Query: 46 AEDSHSASDYE---------------LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFY 90
EDS S DY FMKR KK K +K + SKI +Y+ RKNFY
Sbjct: 101 GEDSDS--DYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKI--EYEPFRKNFY 156
Query: 91 TQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVA 146
+ ++I+RM+ YRK+L+LK+ K P+PIK W QTGLT+KIL+T KLN+E P+
Sbjct: 157 IEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMP 216
Query: 147 IQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGE 206
IQ A +I+SG D + + +TGSGKTL F+LPMLRHI +QPPV GD P+GLVMAPT E
Sbjct: 217 IQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGD-GPIGLVMAPTRE 275
Query: 207 LVRQ------------------------------QVRRG---------RMIDLLCKNGVK 227
LV+Q +++RG RMID+LC + K
Sbjct: 276 LVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGK 335
Query: 228 ITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNV 287
ITNL RVT+LV+DEADRMFDMGFEPQITRI+QNIRP+RQ VLFS TFP +VE LARK V
Sbjct: 336 ITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARK--V 393
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPND 317
N + V R + K++ ++ +D
Sbjct: 394 LNKPVEIQVGGRSVVNKDITQLVEVRPESD 423
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 139/209 (66%), Gaps = 4/209 (1%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVCNL IA SV ARGLD KELELV+NFDAPN YEDYVH ++ K CA FISE
Sbjct: 485 KSNVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 544
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVKA ELSE V DDLKA+AD F+AKV G+ Q HGTG+GG +
Sbjct: 545 DDAKYAPDLVKALELSEQPVPDDLKALADGFMAKVKQGIEQAHGTGYGGSGFKFNEEEEE 604
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKS-GGDISHQDSIAKIATIAAASNSKASAS 459
K +KAQAKEYGF EDKSDSED ++ RK+ GG+IS Q + AA+ A+A
Sbjct: 605 VRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQQQATFAQIAAIAAAAKAAAAP 664
Query: 460 TPSLISVAQLLPNGGPSIPLPGVLGLSVP 488
+ ++ QLLPNGG +PGVL ++VP
Sbjct: 665 VSAPVTANQLLPNGGGLAAMPGVLPVTVP 693
>gi|242080401|ref|XP_002444969.1| hypothetical protein SORBIDRAFT_07g002100 [Sorghum bicolor]
gi|241941319|gb|EES14464.1| hypothetical protein SORBIDRAFT_07g002100 [Sorghum bicolor]
Length = 946
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 169/372 (45%), Positives = 213/372 (57%), Gaps = 81/372 (21%)
Query: 15 EIDPLDAFMNDM---ECSFAEH---------PNNCFR-------LGRRLPAEDSHSA--- 52
EIDPLDAFMN M E + E +N GR + +DS S
Sbjct: 224 EIDPLDAFMNTMVLPEVAMLERNAASVDSVPASNAVAKKGLKKGTGRIMQGDDSDSDYED 283
Query: 53 -----------SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP 101
D E FMKR KK K +K + SKI DYQ +KNFY +A++I M+
Sbjct: 284 VGDDVGAGLEDEDDEEFMKRVKKTKMEKLGVVDHSKI--DYQPFQKNFYIEAKDIREMTS 341
Query: 102 ----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIIS 157
YRK+L+LK+ K PKPIKTW Q+G T+K+L+T KL E P+ IQA A +I+S
Sbjct: 342 EEVAVYRKELELKVHGKDVPKPIKTWLQSGQTSKLLDTIKKLGFEKPMPIQAQALPVIMS 401
Query: 158 GLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------- 210
G D + + +TGSGKTLAFLLPMLRH+ +QPPV PG D PVGL++APT ELV Q
Sbjct: 402 GRDCIGVAKTGSGKTLAFLLPMLRHVKDQPPVAPG-DGPVGLIVAPTRELVVQIYLDIKK 460
Query: 211 -----------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLV 238
+++R GRMID+LC + KITNL RVT+LV
Sbjct: 461 FSKVLGISCVAVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSNGKITNLRRVTFLV 520
Query: 239 LDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRA 298
+DEADRMFDMGFEPQITRI+QNIR DRQ VLFS TFP +VE+LARK + + I V
Sbjct: 521 MDEADRMFDMGFEPQITRIIQNIRRDRQTVLFSATFPRQVEMLARKVLIKPVEI--QVGG 578
Query: 299 RGLDEKELELVI 310
R + K++ V+
Sbjct: 579 RSVVNKDITQVV 590
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/159 (52%), Positives = 103/159 (64%), Gaps = 3/159 (1%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+N+C+L IA SV ARGLD KELELV+N+D PN YEDYVH ++ K A FISE
Sbjct: 659 KSNICSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGSAVTFISE 718
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E YA DLVKA ELSE V DDLKA+AD F+AKV G + HGTG+GG +
Sbjct: 719 EEERYAPDLVKALELSEQTVPDDLKALADRFMAKVKQGTERTHGTGYGGSGFKFNEEEDE 778
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQ 439
K +KAQA EYG+ E+KSDS+ +E K+G D+ Q
Sbjct: 779 ARKFTKKAQAMEYGYEEEKSDSDFDEEEVHKAGDDLDVQ 817
>gi|413917331|gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 1065
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 178/270 (65%), Gaps = 46/270 (17%)
Query: 58 FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIRE 113
F+KR KK K +K + SKI DYQ RKNFY + ++IT+M+ YRK L+LK+
Sbjct: 375 FIKRVKKTKAEKLAIVDHSKI--DYQPFRKNFYIEVKDITKMTSEEVVDYRKHLELKVHG 432
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K PKPIKTW Q+GLT+K+L+T KL E P+ IQ A +I+SG D + I +TGSGKTL
Sbjct: 433 KDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQTQALPIIMSGRDCIGIAKTGSGKTL 492
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
AF+LPMLRH+ +QPPVVPG D P+GL+MAPT ELV Q
Sbjct: 493 AFVLPMLRHVKDQPPVVPG-DGPIGLIMAPTRELVVQIHSDIKKFSKVLGINCVAIYGGS 551
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
+++R GRMID+LC + KITNL RVT+LV+DEADRMFDMGFEPQI
Sbjct: 552 GVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQI 611
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
TRIVQN RPDRQ VLFS TFP +VEILARK
Sbjct: 612 TRIVQNTRPDRQTVLFSATFPRQVEILARK 641
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/157 (56%), Positives = 107/157 (68%), Gaps = 4/157 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVC+L IA SV ARGLD KELELV+N+D PN YEDYVH ++ K A FIS+
Sbjct: 734 KSNVCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISD 793
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E+ YATDLVKA ELSE V DLKA+AD F+AKV G Q HGTG+GG +
Sbjct: 794 EDERYATDLVKALELSEQAVPQDLKALADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDE 853
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDE-GTRKSGGDI 436
K +KAQA+EYG+ EDKSDS+ DE G RK+GGD+
Sbjct: 854 ARKTAKKAQAREYGYEEDKSDSDSDDEGGVRKAGGDL 890
>gi|242080665|ref|XP_002445101.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
gi|241941451|gb|EES14596.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
Length = 1062
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/270 (53%), Positives = 178/270 (65%), Gaps = 46/270 (17%)
Query: 58 FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIRE 113
F+KR KK K +K + SKI DYQ RKNFY + ++I++M+ YRK L+LK+
Sbjct: 372 FIKRVKKTKAEKLAIVDHSKI--DYQPFRKNFYIEVKDISKMTSEEVVEYRKHLELKVHG 429
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K PKPIKTW Q+GLT+K+L+T KL E P+ IQ A +I+SG D + I +TGSGKTL
Sbjct: 430 KDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQTQALPIIMSGRDCIGIAKTGSGKTL 489
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
AF+LPMLRH+ +QPPVVPG D P+GL+MAPT ELV Q
Sbjct: 490 AFVLPMLRHVKDQPPVVPG-DGPIGLIMAPTRELVVQIHSDIKKFSKVLGINCVAIYGGS 548
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
+++R GRMID+LC + KITNL RVT+LV+DEADRMFDMGFEPQI
Sbjct: 549 GVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQI 608
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
TRIVQN RPDRQ VLFS TFP +VEILARK
Sbjct: 609 TRIVQNTRPDRQTVLFSATFPRQVEILARK 638
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 105/157 (66%), Gaps = 4/157 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVC+L IA SV ARGLD KELELV+N+D PN YEDYVH ++ K A FISE
Sbjct: 731 KSNVCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISE 790
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E YA DLVKA ELSE V DLKA+AD F+AKV G Q HGTG+GG +
Sbjct: 791 EEERYAPDLVKALELSEQAVPQDLKALADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDE 850
Query: 401 RGKQLRKAQAKEYGFGEDKSDSE-DVDEGTRKSGGDI 436
K +KAQA+EYG+ EDKSDS+ D + G RK+GGD+
Sbjct: 851 ARKTAKKAQAREYGYEEDKSDSDSDEEGGVRKAGGDL 887
>gi|143456125|sp|Q0J7Y8.2|RH45_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 45
Length = 947
Score = 267 bits (683), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 178/274 (64%), Gaps = 46/274 (16%)
Query: 54 DYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLDL 109
D E FMKR KK K +K + SKI +YQ RKN Y + ++IT M+ YRK L+L
Sbjct: 216 DDEEFMKRVKKTKVEKLAIVDHSKI--EYQPFRKNLYIEVKDITMMTGEEVATYRKNLEL 273
Query: 110 KIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGS 169
K+ K PKPIKTW Q+GLT+K+L+T KL E P+ IQA A +I+SG D + I +TGS
Sbjct: 274 KVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGS 333
Query: 170 GKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------- 210
GKTLAF+LPMLRH+ +QPPVVPG D P+GL+MAPT ELV Q
Sbjct: 334 GKTLAFVLPMLRHVKDQPPVVPG-DGPIGLIMAPTRELVVQIHSDIKKFAKSLGINCVAI 392
Query: 211 -----------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
+++R GRMID+LC + KITNL RVT+LV+DEADRMFDMGF
Sbjct: 393 YGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGF 452
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
EPQITRIVQN RPDRQ VLFS FP +VEILARK
Sbjct: 453 EPQITRIVQNTRPDRQTVLFSAIFPRQVEILARK 486
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 85/135 (62%), Gaps = 4/135 (2%)
Query: 306 LELVINFDAPNDYEDYVHHCCQSW---LKSCAFRFISEENAIYATDLVKAFELSELVVRD 362
LELV+N+D PN YEDYVH ++ K A FIS+E YA DL KA ELSE V
Sbjct: 582 LELVVNYDVPNHYEDYVHRVGRTGHAGRKGFAVTFISDEEERYAPDLAKALELSEQAVPQ 641
Query: 363 DLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKAQAKEYGFGEDKSDS 422
DLK +AD F+AKV G Q HGTG+GG + + +KAQA+EYG+ EDKSDS
Sbjct: 642 DLKGLADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDEARRSAKKAQAREYGYEEDKSDS 701
Query: 423 E-DVDEGTRKSGGDI 436
+ D + G RK+GGD+
Sbjct: 702 DSDEEGGVRKAGGDL 716
>gi|168059277|ref|XP_001781630.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666944|gb|EDQ53586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1072
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 167/378 (44%), Positives = 208/378 (55%), Gaps = 97/378 (25%)
Query: 16 IDPLDAFMNDM---ECSFAE----------------------------HPNNCFRLGRRL 44
IDPLDAFMN + E S + NN LGR +
Sbjct: 332 IDPLDAFMNSITIPEVSSTDAVELDAPESKPIVAKSGSGKGQDNVKPVKRNNRNTLGRIM 391
Query: 45 PAEDSHSASDYEL--------FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREI 96
P +DS S + + F+KR KK K +K + SKI+ Y RKNFY + +EI
Sbjct: 392 PGDDSASEDEDDGEGDEDDDEFLKRVKKTKAEKLAIVDHSKIQ--YPSFRKNFYIEVKEI 449
Query: 97 TRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPAS 152
+RM+ A YRK+L+LKIR K P+P+KTW QTGL +K+L+ K E P+ IQ A
Sbjct: 450 SRMTKAEAEAYRKELELKIRGKDVPRPLKTWNQTGLNSKVLDVIKKSGFEKPMPIQTQAL 509
Query: 153 ALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-- 210
+I+SG D + I +TGSGKTLAF+LPMLRHI +QPP+ GD P+GL+MAPT ELV+Q
Sbjct: 510 PIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIMDQPPLQQGD-GPIGLIMAPTRELVQQIY 568
Query: 211 -QVRR------------------------------------GRMIDLLCKNGVKITNLTR 233
+R+ GRMID+LC + KITNL R
Sbjct: 569 NDIRKFSKVVGLTCVPVYGGSGVAQQISDLKRGTEIVVCTPGRMIDILCTSSGKITNLRR 628
Query: 234 VTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT-------- 285
VTYLV+DEADRMFDMGFEPQITRIVQN RPDRQ VLFS TFP +VE+LARK
Sbjct: 629 VTYLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEVLARKVLTKPVEIQ 688
Query: 286 ----NVCNLSIANSVRAR 299
+V N I +V R
Sbjct: 689 IGGRSVVNSDITQTVEVR 706
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 119/202 (58%), Gaps = 12/202 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
KT+VCNL IA S+ ARGLD KELELV+N+D PN YEDYVH ++ K A FIS
Sbjct: 745 KTSVCNLMIATSIAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFIST 804
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E YA DLVKA ELSE + +DLK +AD F+ KV G Q HG+G+GG +
Sbjct: 805 EEERYAPDLVKALELSEQPIPEDLKKLADDFMVKVKQGSEQAHGSGYGGSGFKFNEEEDE 864
Query: 401 RGKQLRKAQAKEYGF--GEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASA 458
K +KAQA+EYGF EDKSDSE DEG RK+GG++S Q IA +A + +
Sbjct: 865 ALKAAKKAQAREYGFEEEEDKSDSESDDEGIRKAGGEMSSQ--IANQMALANMAGAMGHL 922
Query: 459 STPSL-----ISVAQLLPNGGP 475
+P L S L +G P
Sbjct: 923 GSPMLGMAAGASATAGLTDGNP 944
>gi|452821200|gb|EME28233.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 1145
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/263 (48%), Positives = 164/263 (62%), Gaps = 48/263 (18%)
Query: 69 KNREIIKSKI---KIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPI 120
+ + I+ K+ K +Y +KNFY +A EI +MS YRKQL ++IR + PKP+
Sbjct: 373 RRKRIVYEKVDHSKYNYIHFKKNFYIEAPEIAKMSWEDVHEYRKQLGGIRIRGRNCPKPV 432
Query: 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPML 180
KTW Q GL++ +L+T KL E P AIQA + I++G D + I +TGSGKTLA++LPML
Sbjct: 433 KTWGQCGLSSSVLDTLRKLRFEKPTAIQAQSIPAIMNGRDVIGIAKTGSGKTLAYVLPML 492
Query: 181 RHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---QVRR----------------------- 214
RHI QPP+ G D P+GL++APT EL Q +++R
Sbjct: 493 RHIAAQPPLQIG-DGPIGLIVAPTRELAIQIYGEIKRFAKALDIKVVCAYGGSGIGDQIA 551
Query: 215 -------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI 261
GRMIDLL NG + TNL RVTYLV+DEADRMFDMGFEPQ+TRI +N+
Sbjct: 552 KLKVGAEVVVCTPGRMIDLLSMNGGRATNLRRVTYLVIDEADRMFDMGFEPQVTRIAENV 611
Query: 262 RPDRQAVLFSPTFPPRVEILARK 284
RPDRQ V+FS TFPP+VE LARK
Sbjct: 612 RPDRQTVMFSATFPPQVENLARK 634
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 89/180 (49%), Gaps = 36/180 (20%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISE 340
K + + +A SV ARGLD K L LVIN+D PN YEDYVH ++ A+ FI+
Sbjct: 727 KNGLVKILVATSVAARGLDVKHLRLVINYDVPNHYEDYVHRVGRTGRAGNPGTAYTFITP 786
Query: 341 ENAIYATDLVKAFELS------------------ELVVR-------DDLKAVADSFIAKV 375
E ++A DLV+A ELS E + + +L+ + F K
Sbjct: 787 EQEVFAPDLVRAVELSAKAAAQEVIGSSNSDEANEFISKYLSKAIPPELRHLVTQFEQKR 846
Query: 376 NLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKAQAKEYG--FGEDKSDS------EDVDE 427
+GL G+G+GG + K+LRKAQA+EYG G+++ +S E+VD+
Sbjct: 847 KVGLAHFAGSGYGGKGYKFNEEEEESTKKLRKAQAREYGLDLGDEEEESATATRMEEVDD 906
>gi|383854537|ref|XP_003702777.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Megachile rotundata]
Length = 1035
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 154/248 (62%), Gaps = 45/248 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+YQ RK+FY + EI RM+P AY+++L+ ++++ K PKPIK+W Q G+T K LE
Sbjct: 328 EYQPFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEV 387
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
KL +E P IQ A I+SG D + I +TGSGKTLAFLLPM RHI +QPP+ G D
Sbjct: 388 LKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLADG-DG 446
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
P+ L+M PT EL Q +++R GR
Sbjct: 447 PIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGR 506
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI++N+RPDRQ VLFS TFP
Sbjct: 507 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMENVRPDRQTVLFSATFPR 566
Query: 277 RVEILARK 284
++E LAR+
Sbjct: 567 QMEALARR 574
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 663 ILDFKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT 722
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E YA D+++A EL+ + V + L+ + + + A+ +VH
Sbjct: 723 FITSEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVH 769
>gi|302835930|ref|XP_002949526.1| hypothetical protein VOLCADRAFT_59325 [Volvox carteri f.
nagariensis]
gi|300265353|gb|EFJ49545.1| hypothetical protein VOLCADRAFT_59325 [Volvox carteri f.
nagariensis]
Length = 722
Score = 227 bits (579), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 124/249 (49%), Positives = 159/249 (63%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I+Y RKNFY + E+T+++ A RK++D +K+R K P P++ W Q GL++++LE
Sbjct: 27 INYAPFRKNFYIEVAELTKLNDAERAELRKEMDGIKVRGKDIPAPVRAWTQAGLSSRLLE 86
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P+ IQA A +I+SG D + I +TGSGKT+AF+LPM+RHI +QPP+ G D
Sbjct: 87 VLKKRGFDRPLPIQAQALPIIMSGRDCIGIAKTGSGKTMAFVLPMMRHIKDQPPLQQG-D 145
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
PV LV+APT ELV Q +++R G
Sbjct: 146 GPVSLVIAPTRELVAQIAKEAKAFGKPLGLNALAVFGGSGVANQISELKRGVEIVACTPG 205
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMIDLL + KITNL RVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQ V+FS TFP
Sbjct: 206 RMIDLLVTSNGKITNLRRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQTVMFSATFP 265
Query: 276 PRVEILARK 284
+VE+LARK
Sbjct: 266 RQVEVLARK 274
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K VCN+ +A S+ ARGLD K+L LV+N+D PN +EDYVH ++ K A FI
Sbjct: 367 KGAVCNILVATSIAARGLDVKDLVLVVNYDVPNHHEDYVHRVGRTGRAGAKGTAITFIGP 426
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ YA DLVKA S + DL+ + ++ L Q HG+G+GG
Sbjct: 427 DEERYAPDLVKALRESGAAIPQDLQRIMCCPAPRLRSCL-QAHGSGYGGSGFKFDTNEEE 485
Query: 401 RGKQLRKAQAK 411
R + +KA+AK
Sbjct: 486 RFRVDKKAKAK 496
>gi|328786029|ref|XP_001122722.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Apis
mellifera]
Length = 1030
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 154/248 (62%), Gaps = 45/248 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+YQ RK+FY + EI RM+P AY+++L+ ++++ K PKPIK+W Q G+T K LE
Sbjct: 323 EYQPFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEV 382
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
KL +E P IQ A I+SG D + I +TGSGKTLAFLLPM RHI +QPP+ G D
Sbjct: 383 LKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLADG-DG 441
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
P+ L+M PT EL Q +++R GR
Sbjct: 442 PIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGR 501
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI++N+RPDRQ VLFS TFP
Sbjct: 502 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMENVRPDRQTVLFSATFPR 561
Query: 277 RVEILARK 284
++E LAR+
Sbjct: 562 QMEALARR 569
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 658 ILDFKAGRTKLLVATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT 717
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E YA D+++A EL+ + V + L+ + + + A+ +VH
Sbjct: 718 FITSEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVH 764
>gi|307202910|gb|EFN82130.1| Probable ATP-dependent RNA helicase DDX46 [Harpegnathos saltator]
Length = 1034
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 153/248 (61%), Gaps = 45/248 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
DYQ RK+FY + EI RM+P Y+++L+ ++++ K PKPIK+W Q G+T K LE
Sbjct: 327 DYQPFRKSFYVEVPEIARMTPEEVEIYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEV 386
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
KL +E P IQ A I+SG D + I +TGSGKTLAFLLPM RHI +QPP+ G D
Sbjct: 387 LKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLADG-DG 445
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
P+ L+M PT EL Q +++R GR
Sbjct: 446 PIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI++N+RPDRQ VLFS TFP
Sbjct: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMENVRPDRQTVLFSATFPR 565
Query: 277 RVEILARK 284
++E LAR+
Sbjct: 566 QMEALARR 573
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 662 ILDFKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT 721
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E YA D+++A EL+ ++V + L+ + + + A+ +VH
Sbjct: 722 FITSEQERYAGDILRAHELAGVLVPEPLRQLWEGYKARQAADGKKVH 768
>gi|380022024|ref|XP_003694855.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Apis
florea]
Length = 713
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/248 (47%), Positives = 154/248 (62%), Gaps = 45/248 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+YQ RK+FY + EI RM+P AY+++L+ ++++ K PKPIK+W Q G+T K LE
Sbjct: 323 EYQPFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEV 382
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
KL +E P IQ A I+SG D + I +TGSGKTLAFLLPM RHI +QPP+ G D
Sbjct: 383 LKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLADG-DG 441
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
P+ L+M PT EL Q +++R GR
Sbjct: 442 PIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGR 501
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI++N+RPDRQ VLFS TFP
Sbjct: 502 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMENVRPDRQTVLFSATFPR 561
Query: 277 RVEILARK 284
++E LAR+
Sbjct: 562 QMEALARR 569
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 30/46 (65%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC 325
IL K L +A SV ARGLD K L LV+N+D PN YEDYVH C
Sbjct: 658 ILDFKAGRTKLLVATSVAARGLDVKHLILVVNYDCPNHYEDYVHRC 703
>gi|332031410|gb|EGI70923.1| Putative ATP-dependent RNA helicase DDX46 [Acromyrmex echinatior]
Length = 1013
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 153/248 (61%), Gaps = 45/248 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+YQ RK+FY + EI RM+P Y+++L+ ++++ K PKPIK+W Q G+T K LE
Sbjct: 306 EYQPFRKSFYVEVPEIARMTPEEVEVYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEV 365
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
KL +E P IQ A I+SG D + I +TGSGKTLAFLLPM RHI +QPP+ G D
Sbjct: 366 LKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLADG-DG 424
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
P+ L+M PT EL Q +++R GR
Sbjct: 425 PIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGR 484
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI++N+RPDRQ VLFS TFP
Sbjct: 485 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMENVRPDRQTVLFSATFPR 544
Query: 277 RVEILARK 284
++E LAR+
Sbjct: 545 QMEALARR 552
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 641 ILDFKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT 700
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E YA D+++A EL+ + V + L+ + + + A+ +VH
Sbjct: 701 FITSEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVH 747
>gi|340724160|ref|XP_003400452.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46-like [Bombus terrestris]
Length = 1030
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 120/261 (45%), Positives = 158/261 (60%), Gaps = 46/261 (17%)
Query: 69 KNREIIK-SKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKT 122
+ RE+ K +YQ RK+FY + EI RM+ AY+++L+ ++++ K PKPIK+
Sbjct: 310 QKRELAKVDHATTEYQPFRKSFYVEVPEIARMTSEEVDAYKEELEGIRVKGKGCPKPIKS 369
Query: 123 WRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRH 182
W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAFLLPM RH
Sbjct: 370 WAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRH 429
Query: 183 IWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------------QV 212
I +QPP+ G D P+ L+M PT EL Q ++
Sbjct: 430 ILDQPPLADG-DGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQIAEL 488
Query: 213 RR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRP 263
+R GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI++N+RP
Sbjct: 489 KRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMENVRP 548
Query: 264 DRQAVLFSPTFPPRVEILARK 284
DRQ VLFS TFP ++E LAR+
Sbjct: 549 DRQTVLFSATFPRQMEALARR 569
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 658 ILDFKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT 717
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E YA D+++A EL+ + V + L+ + + + A+ +VH
Sbjct: 718 FITSEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVH 764
>gi|307189252|gb|EFN73695.1| Probable ATP-dependent RNA helicase DDX46 [Camponotus floridanus]
Length = 1028
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 153/248 (61%), Gaps = 45/248 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+YQ RK+FY + EI RM+P Y+++L+ ++++ K PKPIK+W Q G+T K LE
Sbjct: 321 EYQPFRKSFYVEVPEIARMTPEEVEMYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEV 380
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
KL +E P IQ A I+SG D + I +TGSGKTLAFLLPM RHI +QPP+ G D
Sbjct: 381 LKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLADG-DG 439
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
P+ L+M PT EL Q +++R GR
Sbjct: 440 PIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGR 499
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI++N+RPDRQ VLFS TFP
Sbjct: 500 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMENVRPDRQTVLFSATFPR 559
Query: 277 RVEILARK 284
++E LAR+
Sbjct: 560 QMEALARR 567
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 656 ILDFKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT 715
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E YA D+++A EL+ + V + L+ + + + A+ QVH
Sbjct: 716 FITSEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKQVH 762
>gi|307110891|gb|EFN59126.1| hypothetical protein CHLNCDRAFT_137938 [Chlorella variabilis]
Length = 1343
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 180/340 (52%), Gaps = 89/340 (26%)
Query: 58 FMKRAKKKKRDKNREIIK-SKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKI 111
+M++ K K +++ I Y R+NFY + E+ RMS YRKQLD +K+
Sbjct: 377 WMRKLIAGKLSKGEKLVAVDHAAIQYPPFRRNFYIEVPELARMSGEEVEEYRKQLDGVKV 436
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQA---------------------P 150
R K PKP++ W Q GL+T+ILE K E P++IQA P
Sbjct: 437 RGKDVPKPVRNWNQCGLSTRILEVLKKGGFEQPLSIQAQALPGAWLGCRGRCSLAAAPWP 496
Query: 151 ASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ 210
A +LI+SG D + I +TGSGKTLAF+LPM+RH+ +QP + G D PV L MAPT ELV Q
Sbjct: 497 ACSLIMSGRDCIGIAKTGSGKTLAFVLPMMRHVKDQPALANG-DGPVALAMAPTRELVTQ 555
Query: 211 -------------QVRR------------------------------------GRMIDLL 221
+V+R GRMID+L
Sbjct: 556 ASVLGWWWLMIGKEVKRFAKVVGLTCVCVYGGTGVANQITELKRGTEIVVCTPGRMIDIL 615
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+G +ITNL RVTYLVLDEADRMFDMGFEPQI RIVQNIRPDRQ V+FS TFP +VE+L
Sbjct: 616 VTSGGRITNLRRVTYLVLDEADRMFDMGFEPQIMRIVQNIRPDRQTVMFSATFPRQVEVL 675
Query: 282 ARKT------------NVCNLSIANSVRARGLDEKELELV 309
AR+ +V N I + R D++ L L+
Sbjct: 676 ARQVLHNPVEIQVGGRSVVNKDITQFIEIRPEDDRFLRLL 715
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFR 336
I+ K NVCN+ +A SV ARGLD K+L LV+N+D PN +EDYVH ++ K A
Sbjct: 762 IVDYKANVCNILVATSVAARGLDVKDLVLVVNYDVPNHHEDYVHRVGRTGRAGAKGSAIT 821
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNL 394
FI + YA DLVKA + S + DL A+A++F K G Q+H +G GG
Sbjct: 822 FIGPDEEQYAPDLVKALKESGAPIPQDLAAMAEAFGKKRREGKAQLHSSGFGGSGFKF 879
>gi|350408906|ref|XP_003488552.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Bombus
impatiens]
Length = 1030
Score = 224 bits (572), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/248 (47%), Positives = 153/248 (61%), Gaps = 45/248 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+YQ RK+FY + EI RM+ AY+++L+ ++++ K PKPIK+W Q G+T K LE
Sbjct: 323 EYQPFRKSFYVEVPEIARMTSEEVEAYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEV 382
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
KL +E P IQ A I+SG D + I +TGSGKTLAFLLPM RHI +QPP+ G D
Sbjct: 383 LKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLADG-DG 441
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
P+ L+M PT EL Q +++R GR
Sbjct: 442 PIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGR 501
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI++N+RPDRQ VLFS TFP
Sbjct: 502 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMENVRPDRQTVLFSATFPR 561
Query: 277 RVEILARK 284
++E LAR+
Sbjct: 562 QMEALARR 569
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 658 ILDFKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT 717
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E YA D+++A EL+ + V + L+ + + + A+ +VH
Sbjct: 718 FITSEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVH 764
>gi|452989114|gb|EME88869.1| hypothetical protein MYCFIDRAFT_114276, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1111
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 142/343 (41%), Positives = 189/343 (55%), Gaps = 63/343 (18%)
Query: 1 MPETTTKQLPVVQIEID----PLDAFMNDMECSFAEHPN-NCFRLGRRLPA---EDSHSA 52
+P TT+ + +E+D PLDAFMN++E P + + G R P ED
Sbjct: 339 VPATTSAAVADTAMEVDEDVDPLDAFMNNLEEVPERRPQPSAAKRGTREPRLFDEDDGPD 398
Query: 53 SDY-----ELFMKRAKKKKRDKNREIIK-SKIKIDYQQLRKNFYTQAREITRMSP----A 102
D E + A++KK+ EI KIDY+ RKNFY ++ E++ M+
Sbjct: 399 LDAVGDNPEDLLNPARRKKK----EIPAVDHSKIDYESFRKNFYNESIEVSEMTEDDVTT 454
Query: 103 YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDS 161
R +LD + +R PKPI W Q G ++L+ + E+P +IQ A I+SG D+
Sbjct: 455 LRAELDNITVRGVDPPKPITKWSQAGFGAQVLDVIRENKFESPTSIQCQALPAIMSGRDT 514
Query: 162 VAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------- 210
+ I +TGSGKTLAF+LPM RHI +Q PV + PVG++MAPT EL Q
Sbjct: 515 IGIAKTGSGKTLAFILPMFRHIKDQRPVA-NLEGPVGIIMAPTRELAVQIHRECKPYLKA 573
Query: 211 -------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEA 242
+++R GRMIDLL N ++TNL RVTY+V+DEA
Sbjct: 574 LGLRGVCAYGGAPIKDQIAELKRGAEVVVCTPGRMIDLLAANQGRVTNLRRVTYVVMDEA 633
Query: 243 DRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
DRMFDMGFEPQITRI+ NIRPDRQ VLFS TFP ++E LARKT
Sbjct: 634 DRMFDMGFEPQITRILGNIRPDRQTVLFSATFPKKMESLARKT 676
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K+ + +A SV ARGLD K+L+LVINFD+PN EDYVH ++ A
Sbjct: 767 ILDFKSGAIPIMVATSVAARGLDVKQLKLVINFDSPNHGEDYVHRAGRTGRAGNTGTAVT 826
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
F++ E YA LV+ E S+ DDLK +A + KV G G+G GG + +
Sbjct: 827 FVTPEQDRYAPFLVRCLEDSKQEPPDDLKELAATHKKKVEAGEASRAGSGFGGHGIERL 885
>gi|325089715|gb|EGC43025.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Ajellomyces
capsulatus H88]
Length = 1199
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 187/349 (53%), Gaps = 73/349 (20%)
Query: 3 ETTTKQLPVV----QIEIDPLDAFMNDM-ECSFAEHPNNCFRLGRR--------LPAEDS 49
ET T LPV + E DPLDAFM+ + E + A+H N + ED
Sbjct: 425 ETQTATLPVTMDVEEEETDPLDAFMSGLAESAAAQHGRNKTNFSKSKLSKPEAIFGDEDD 484
Query: 50 -------HSASDYELFMKRAKKKKR--DKNREIIKSKIKIDYQQLRKNFYTQAREITRMS 100
A D+ + +KKK N E K++Y+ RKNFYT+ ++ ++
Sbjct: 485 IDMKAIDPEADDFLAITSKGRKKKDLPPVNHE------KMNYEPFRKNFYTEPVDLAELT 538
Query: 101 ----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALI 155
A R +LD +K+R PKP++ W Q GL + L+ KLN+ENP +IQ+ A I
Sbjct: 539 EEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQSQAIPAI 598
Query: 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----- 210
+SG D + + +TGSGKT+AFLLPM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 599 MSGRDVIGVAKTGSGKTIAFLLPMFRHIMDQRP-LENMEGPIGLIMTPTRELATQIHKEC 657
Query: 211 -------------------------QVRR---------GRMIDLLCKNGVKITNLTRVTY 236
+++R GRMIDLL N ++TNL RVTY
Sbjct: 658 KPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTY 717
Query: 237 LVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+VLDEADRMFDMGFEPQ+ RI+ N+RP RQ VLFS TFP +E LARKT
Sbjct: 718 VVLDEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATFPRNMEALARKT 766
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 863 KAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 922
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+ Y+ D+ KA + S V + ++ + +SF+ KV G + G+G GG L
Sbjct: 923 DQERYSVDISKALKQSGQPVPEPVQKLVNSFMEKVKAGKEKASGSGFGGKGL 974
>gi|225559706|gb|EEH07988.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
capsulatus G186AR]
Length = 1201
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 187/349 (53%), Gaps = 73/349 (20%)
Query: 3 ETTTKQLPVV----QIEIDPLDAFMNDM-ECSFAEHPNNCFRLGRR--------LPAEDS 49
ET T LPV + E DPLDAFM+ + E + A+H N + ED
Sbjct: 427 ETQTATLPVTMDVEEEETDPLDAFMSGLAESAAAQHGRNKTNFSKSQLSKPEAIFGDEDD 486
Query: 50 -------HSASDYELFMKRAKKKKR--DKNREIIKSKIKIDYQQLRKNFYTQAREITRMS 100
A D+ + +KKK N E K++Y+ RKNFYT+ ++ ++
Sbjct: 487 IDMKAIDPEADDFLAITSKGRKKKDLPPVNHE------KMNYEPFRKNFYTEPVDLAELT 540
Query: 101 ----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALI 155
A R +LD +K+R PKP++ W Q GL + L+ KLN+ENP +IQ+ A I
Sbjct: 541 EEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQSQAIPAI 600
Query: 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----- 210
+SG D + + +TGSGKT+AFLLPM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 601 MSGRDVIGVAKTGSGKTIAFLLPMFRHIMDQRP-LENMEGPIGLIMTPTRELATQIHKEC 659
Query: 211 -------------------------QVRR---------GRMIDLLCKNGVKITNLTRVTY 236
+++R GRMIDLL N ++TNL RVTY
Sbjct: 660 KPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTY 719
Query: 237 LVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+VLDEADRMFDMGFEPQ+ RI+ N+RP RQ VLFS TFP +E LARKT
Sbjct: 720 VVLDEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATFPRNMEALARKT 768
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 865 KAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 924
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+ Y+ D+ KA + S V + ++ + +SF+ KV G + G+G GG L
Sbjct: 925 DQERYSVDISKALKQSGQPVPEPVQKLVNSFMEKVKAGKEKASGSGFGGKGL 976
>gi|240280856|gb|EER44360.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Ajellomyces
capsulatus H143]
Length = 1200
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 187/349 (53%), Gaps = 73/349 (20%)
Query: 3 ETTTKQLPVV----QIEIDPLDAFMNDM-ECSFAEHPNNCFRLGRR--------LPAEDS 49
ET T LPV + E DPLDAFM+ + E + A+H N + ED
Sbjct: 425 ETQTATLPVTMDVEEEETDPLDAFMSGLAESAAAQHGRNKTNFSKSKLSKPEAIFGDEDD 484
Query: 50 -------HSASDYELFMKRAKKKKR--DKNREIIKSKIKIDYQQLRKNFYTQAREITRMS 100
A D+ + +KKK N E K++Y+ RKNFYT+ ++ ++
Sbjct: 485 IDMKAIDPEADDFLAITSKGRKKKDLPPVNHE------KMNYEPFRKNFYTEPVDLAELT 538
Query: 101 ----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALI 155
A R +LD +K+R PKP++ W Q GL + L+ KLN+ENP +IQ+ A I
Sbjct: 539 EEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQSQAIPAI 598
Query: 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----- 210
+SG D + + +TGSGKT+AFLLPM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 599 MSGRDVIGVAKTGSGKTIAFLLPMFRHIMDQRP-LENMEGPIGLIMTPTRELATQIHKEC 657
Query: 211 -------------------------QVRR---------GRMIDLLCKNGVKITNLTRVTY 236
+++R GRMIDLL N ++TNL RVTY
Sbjct: 658 KPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTY 717
Query: 237 LVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+VLDEADRMFDMGFEPQ+ RI+ N+RP RQ VLFS TFP +E LARKT
Sbjct: 718 VVLDEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATFPRNMEALARKT 766
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 863 KAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 922
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGG 389
+ Y+ D+ KA + S V + ++ + +SF+ KV G + G+G GG
Sbjct: 923 DQERYSVDISKALKQSGQPVPEPVQKLVNSFMEKVKAGKEKASGSGFGG 971
>gi|145350640|ref|XP_001419709.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579941|gb|ABO98002.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 723
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/249 (48%), Positives = 150/249 (60%), Gaps = 45/249 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPIKTWRQTGLTTKIL 133
+IDY+ ++KNFY +A+EI M+ A KQL +K R K PKPIKTW Q GL ++
Sbjct: 70 EIDYEPVKKNFYIEAKEIASMTKAEVKQLRVELDGIKCRGKKVPKPIKTWAQAGLNNRVH 129
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
E + E P+ IQA A +I+SG D + + +TGSGKTLA++LPMLRHI Q P+ G
Sbjct: 130 ELIRRSGFEKPMPIQAQALPVIMSGRDCIGVAKTGSGKTLAYILPMLRHINAQEPLASG- 188
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
D P+G++M PT ELV Q ++R
Sbjct: 189 DGPIGMIMGPTRELVTQIGKDCKRYGKAMGFSAVSVYGGSGIAAQIGDLKRGAEIVACTP 248
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL KITNL RVTY+VLDEADRMFDMGFEPQITRI+ N+RPDRQ V+FS TF
Sbjct: 249 GRMIDLLTTGSGKITNLRRVTYMVLDEADRMFDMGFEPQITRILANLRPDRQTVMFSATF 308
Query: 275 PPRVEILAR 283
P +E LAR
Sbjct: 309 PHTMEALAR 317
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSW---LKSCAFRFISE 340
K++VCN+ +A SV ARGLD K+L LVIN+D PN EDYVH ++ K A FISE
Sbjct: 386 KSDVCNILVATSVAARGLDVKDLRLVINYDTPNHLEDYVHRVGRTGRAGQKGTAVTFISE 445
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGL 379
+ +A DLVKA + S+ V D++A+AD F K GL
Sbjct: 446 DEEKFAPDLVKALKESKQNVPQDVQAMADEFTRKRKEGL 484
>gi|395817878|ref|XP_003804109.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46 [Otolemur garnettii]
Length = 941
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 221/447 (49%), Gaps = 94/447 (21%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREII 74
E+DPLDA+M +++ + + G + +S+ + E+ ++ A + K R+++
Sbjct: 224 ELDPLDAYMEEVKEEVKKFNMRSVKGG---GGNEKYSSEEEEVDLQTALTGYQTKQRKLL 280
Query: 75 K--SKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTG 127
+ KI+Y+ RKNFY + E+ +MS +R +++ + ++ K PKPIK+W Q G
Sbjct: 281 EPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCG 340
Query: 128 LTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQP 187
++ KIL + K +E P IQ A I+SG D + I +TGSGKT+AFLLPM RHI +Q
Sbjct: 341 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 400
Query: 188 PVVPGDDSPVGLVMAPTGELVRQ------------------------------QVRR--- 214
+ G + P+ ++M PT EL Q +++R
Sbjct: 401 SLEEG-EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 459
Query: 215 ------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQN-------- 260
GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQI +
Sbjct: 460 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQIVIEEEKKFLKLLEL 519
Query: 261 -----------IRPDRQAV-------LFSPTFP-----------PRVEILAR-KTNVCNL 290
I D+Q L ++P R I+ K C L
Sbjct: 520 LGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKL 579
Query: 291 SIANSVRARGLDEKELELVINFDAPNDYEDYVHH------CCQSWLKSCAFRFISEENAI 344
+A SV ARGLD K L LV+N+ PN YEDY+ + K A+ FI+E+ A
Sbjct: 580 LVATSVAARGLDVKHLILVVNYSCPNHYEDYIKENXAGRSGSRLGKKGYAYTFITEDQAR 639
Query: 345 YATDLVKAFELSELVVRDDLKAVADSF 371
YA D++KA ELS V DL+ + F
Sbjct: 640 YAGDIIKALELSGTAVPPDLEKLWSDF 666
>gi|412990813|emb|CCO18185.1| predicted protein [Bathycoccus prasinos]
Length = 1225
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 127/279 (45%), Positives = 163/279 (58%), Gaps = 48/279 (17%)
Query: 50 HSASDYELFMK-RAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLD 108
S SD E K +AK K DK ++ S I DY RKNFY +A E+++M+ K+L
Sbjct: 408 ESDSDDEWAAKQKAKLSKADKLGAVVHSDI--DYPPFRKNFYIEAYEMSKMTKEEVKELR 465
Query: 109 LKI-----REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVA 163
K+ R K PKPIK+W Q GL+ KI+E + ENP+ IQA A +I+SG D +A
Sbjct: 466 TKLDGISCRGKKVPKPIKSWNQAGLSNKIMELIRRSGFENPMPIQAQALPIIMSGRDCIA 525
Query: 164 ITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---QVRR------ 214
+ +TGSGKTLA++LPMLRHI +QP + G D P+ +++ PT ELV Q + R+
Sbjct: 526 VAKTGSGKTLAYILPMLRHIKDQPEIKNG-DGPIAMIVGPTRELVTQIGKECRKFGKTVG 584
Query: 215 ------------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADR 244
GRMID+L KITNL R+TY VLDEADR
Sbjct: 585 VRCVSVYGGSGVQSQITDLKRGCEAVACTPGRMIDILTTGAGKITNLRRITYFVLDEADR 644
Query: 245 MFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
MFDMGFEPQITRI+ N RPDRQ V+FS TFP +E +AR
Sbjct: 645 MFDMGFEPQITRILANTRPDRQTVMFSATFPRAMENIAR 683
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ KT+VCN+ +A SV ARGLD K+++LVINFD PN EDYVH ++ K A
Sbjct: 773 IVDFKTDVCNVLVATSVAARGLDVKDVKLVINFDCPNHLEDYVHRVGRTGRAGEKGTAVT 832
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSF 371
FIS + +A DLVKA ++ V D+ A+A++F
Sbjct: 833 FISRDEERFAPDLVKAMREAKQPVPQDVLALAEAF 867
>gi|308807515|ref|XP_003081068.1| DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
gi|116059530|emb|CAL55237.1| DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
Length = 1030
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/249 (47%), Positives = 154/249 (61%), Gaps = 45/249 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+IDY+ ++K+FY +++EI+ M+ A R +LD +K R K PKPIKTW GL+ +I
Sbjct: 283 EIDYEPVKKDFYIESKEISSMTKAQTRALRAELDGIKCRGKKVPKPIKTWAHAGLSGRIH 342
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
E + E P+ IQA A +I+SG D + I +TGSGKTLA++LPMLRHI Q P+ G
Sbjct: 343 ELIRRCGFEKPMPIQAQALPVIMSGRDCIGIAKTGSGKTLAYILPMLRHINAQEPLKNG- 401
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
D P+G++M PT ELV Q +++R
Sbjct: 402 DGPIGMIMGPTRELVTQIGKEAKRYGKALGFNAVSVYGGSGIAAQIGELKRGAEIVACTP 461
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L G KITNL RVTY+VLDEADRMFDMGFEPQITRI+ N+RPDRQ V+FS TF
Sbjct: 462 GRMIDILTTGGGKITNLRRVTYIVLDEADRMFDMGFEPQITRILANLRPDRQTVMFSATF 521
Query: 275 PPRVEILAR 283
P +E LAR
Sbjct: 522 PHTMEALAR 530
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K++VCN+ +A SV ARGLD K+L LVIN+D PN EDYVH ++ K A FISE
Sbjct: 624 KSDVCNILVATSVAARGLDVKDLRLVINYDTPNHLEDYVHRVGRTGRAGQKGTAVTFISE 683
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGL 379
+ +A DLVKA + S+ V D++ +AD F K GL
Sbjct: 684 DEEKFAPDLVKALKDSKQTVPRDVQRLADEFTRKRKEGL 722
>gi|302665308|ref|XP_003024266.1| hypothetical protein TRV_01617 [Trichophyton verrucosum HKI 0517]
gi|291188313|gb|EFE43655.1| hypothetical protein TRV_01617 [Trichophyton verrucosum HKI 0517]
Length = 1171
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/381 (37%), Positives = 198/381 (51%), Gaps = 72/381 (18%)
Query: 10 PVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYEL-----------F 58
P + EIDPLDAFM+D++ S + + +L ++ + ++ F
Sbjct: 412 PEAEEEIDPLDAFMSDLKQSTSTPKQSVKPSSSKLQQPEAMFGDENDINMDPVEPDADDF 471
Query: 59 MKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIRE 113
A K KR K+ + KI+Y+ RKNFYT+ ++ +S A R +LD +K+R
Sbjct: 472 FALANKSKRKKDIPTVNHS-KINYEPFRKNFYTEPVDLAGLSEAEVANIRLELDGIKVRG 530
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
P P++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+
Sbjct: 531 VDVPTPVQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQAVPAIMSGRDVIGVAKTGSGKTI 590
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
AFLLPM RHI +Q P + + P+ L+M PT EL Q
Sbjct: 591 AFLLPMFRHIRDQRP-LENMEGPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGA 649
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+
Sbjct: 650 PIKDQIAELKRGAEIIVCTPGRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQV 709
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLD 302
+I+ NIRP+RQ VLFS TFP +E LARKT +V I V R D
Sbjct: 710 MKILGNIRPNRQTVLFSATFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDD 769
Query: 303 EK---ELELVINFDAPNDYED 320
K LEL+ N + ++ ED
Sbjct: 770 AKFVRLLELLGNLYSDDENED 790
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + +A SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 837 KAGIFPILVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 896
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ Y+ D+ KA + S V + ++ + ++F+ KV G + G+G GG L +R +
Sbjct: 897 DQERYSVDISKALKQSGQPVPEPIQKMVNAFLDKVKEGKEKASGSGFGGKGL---ERLDQ 953
Query: 401 RGKQLRKAQAKEYGFG 416
R + K Y G
Sbjct: 954 ERDATRNRERKTYKTG 969
>gi|239613405|gb|EEQ90392.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis ER-3]
Length = 1197
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 189/346 (54%), Gaps = 73/346 (21%)
Query: 6 TKQLPVV----QIEIDPLDAFMNDM-ECSFAEHPNNCFRLGR-RLPAEDS---------- 49
T LPV + E DPLDAFM+ + E + A+ N + +LP ++
Sbjct: 428 TATLPVAMDVEEEETDPLDAFMSGLAESAAAQDARNGTNFSKLKLPKPEAIFGDEDDVDL 487
Query: 50 ----HSASDYELFMKRAKKKKR--DKNREIIKSKIKIDYQQLRKNFYTQAREITRMS--- 100
A D+ +A+KKK N E K++Y+ RK+FYT+ +++ ++
Sbjct: 488 KAIDPEADDFLAITSKARKKKDLPPINHE------KMNYEPFRKDFYTEPVDLSELTDEE 541
Query: 101 -PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISG 158
A R +LD +K+R PKP++ W Q GL + L+ KLN+ENP +IQ+ A I+SG
Sbjct: 542 VAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQSQAIPAIMSG 601
Query: 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------- 210
D + + +TGSGKT+AFLLPM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 602 RDVIGVAKTGSGKTIAFLLPMFRHIMDQRP-LENMEGPIGLIMTPTRELATQIHKECKPF 660
Query: 211 ----------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVL 239
+++R GRMIDLL N ++TNL RVTY+VL
Sbjct: 661 LKALSLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVL 720
Query: 240 DEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
DEADRMFDMGFEPQ+ RI+ N+RP RQ VLFS TFP +E LARKT
Sbjct: 721 DEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATFPRNMEALARKT 766
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 863 KAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 922
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + +SFI KV G + G+G GG L +
Sbjct: 923 DQERYSVDISKALKQSGQPVPEPVQKLVNSFIEKVKAGKEKASGSGFGGKGLERL 977
>gi|261194749|ref|XP_002623779.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis SLH14081]
gi|239588317|gb|EEQ70960.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis SLH14081]
Length = 1197
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 189/346 (54%), Gaps = 73/346 (21%)
Query: 6 TKQLPVV----QIEIDPLDAFMNDM-ECSFAEHPNNCFRLGR-RLPAEDS---------- 49
T LPV + E DPLDAFM+ + E + A+ N + +LP ++
Sbjct: 428 TATLPVAMDVEEEETDPLDAFMSGLAESAAAQDARNGTNFSKFKLPKPEAIFGDEDDVDL 487
Query: 50 ----HSASDYELFMKRAKKKKR--DKNREIIKSKIKIDYQQLRKNFYTQAREITRMS--- 100
A D+ +A+KKK N E K++Y+ RK+FYT+ +++ ++
Sbjct: 488 KAIDPEADDFLAITSKARKKKDLPPINHE------KMNYEPFRKDFYTEPVDLSELTDEE 541
Query: 101 -PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISG 158
A R +LD +K+R PKP++ W Q GL + L+ KLN+ENP +IQ+ A I+SG
Sbjct: 542 VAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQSQAIPAIMSG 601
Query: 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------- 210
D + + +TGSGKT+AFLLPM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 602 RDVIGVAKTGSGKTIAFLLPMFRHIMDQRP-LENMEGPIGLIMTPTRELATQIHKECKPF 660
Query: 211 ----------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVL 239
+++R GRMIDLL N ++TNL RVTY+VL
Sbjct: 661 LKALSLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVL 720
Query: 240 DEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
DEADRMFDMGFEPQ+ RI+ N+RP RQ VLFS TFP +E LARKT
Sbjct: 721 DEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATFPRNMEALARKT 766
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 863 KAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 922
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + +SFI KV G + G+G GG L +
Sbjct: 923 DQERYSVDISKALKQSGQPVPEPVQKLVNSFIEKVKAGKEKASGSGFGGKGLERL 977
>gi|327351907|gb|EGE80764.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1205
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 137/346 (39%), Positives = 189/346 (54%), Gaps = 73/346 (21%)
Query: 6 TKQLPVV----QIEIDPLDAFMNDM-ECSFAEHPNNCFRLGR-RLPAEDS---------- 49
T LPV + E DPLDAFM+ + E + A+ N + +LP ++
Sbjct: 436 TATLPVAMDVEEEETDPLDAFMSGLAESAAAQDARNGTNFSKLKLPKPEAIFGDEDDVDL 495
Query: 50 ----HSASDYELFMKRAKKKKR--DKNREIIKSKIKIDYQQLRKNFYTQAREITRMS--- 100
A D+ +A+KKK N E K++Y+ RK+FYT+ +++ ++
Sbjct: 496 KAIDPEADDFLAITSKARKKKDLPPINHE------KMNYEPFRKDFYTEPVDLSELTDEE 549
Query: 101 -PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISG 158
A R +LD +K+R PKP++ W Q GL + L+ KLN+ENP +IQ+ A I+SG
Sbjct: 550 VAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQSQAIPAIMSG 609
Query: 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------- 210
D + + +TGSGKT+AFLLPM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 610 RDVIGVAKTGSGKTIAFLLPMFRHIMDQRP-LENMEGPIGLIMTPTRELATQIHKECKPF 668
Query: 211 ----------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVL 239
+++R GRMIDLL N ++TNL RVTY+VL
Sbjct: 669 LKALSLRAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVL 728
Query: 240 DEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
DEADRMFDMGFEPQ+ RI+ N+RP RQ VLFS TFP +E LARKT
Sbjct: 729 DEADRMFDMGFEPQVMRILGNVRPQRQTVLFSATFPRNMEALARKT 774
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 871 KAGVFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 930
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + +SFI KV G + G+G GG L +
Sbjct: 931 DQERYSVDISKALKQSGQPVPEPVQKLVNSFIEKVKAGKEKASGSGFGGKGLERL 985
>gi|258570243|ref|XP_002543925.1| hypothetical protein UREG_03442 [Uncinocarpus reesii 1704]
gi|237904195|gb|EEP78596.1| hypothetical protein UREG_03442 [Uncinocarpus reesii 1704]
Length = 1206
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 186/342 (54%), Gaps = 59/342 (17%)
Query: 1 MPETTTKQLPV-VQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSH--------- 50
MPE P+ ++ EIDPLDAFM+ ++ S A P+ + E
Sbjct: 433 MPEPDLSAEPMDIEEEIDPLDAFMSGLKDSVAAKPSKSRTKTSKSKQEPEAIFGDEDDVN 492
Query: 51 -SASDYEL--FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAY 103
A D E F+ A K ++ K+ + + K+DY+ RKNFYT+ ++ ++ A
Sbjct: 493 LKAMDLEADDFLAIANKTRKKKDLPSVNHE-KMDYEPFRKNFYTEPVDLAELNEEEVAAL 551
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R + D +K+R PKP++ W Q GL L+ KL ++ P +IQA A I+SG D +
Sbjct: 552 RLEWDGIKVRGVDVPKPVQKWSQCGLGVLTLDVIHKLGYDQPTSIQAQAIPAIMSGRDVI 611
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
+ +TGSGKT+AFLLPM RHI +Q P + + PVGLVM PT EL Q
Sbjct: 612 GVAKTGSGKTIAFLLPMFRHIKDQRP-LENMEGPVGLVMTPTRELATQIHKECKPFLKAL 670
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMIDLL N ++TNL RVTY+VLDEAD
Sbjct: 671 NLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEAD 730
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
RMFDMGFEPQ+ +I+ NIRP RQ+VLFS TFP +E LARKT
Sbjct: 731 RMFDMGFEPQVMKIIGNIRPSRQSVLFSATFPRNMEALARKT 772
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++E
Sbjct: 869 KAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 928
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA + S V D ++ + D+F+ KV G + +G GG L +
Sbjct: 929 EQERYSVDIAKALKQSGQPVPDAVQKMVDAFLEKVKSGKEKASASGFGGKGLERL 983
>gi|86570094|ref|NP_001033411.1| Protein F53H1.1 [Caenorhabditis elegans]
gi|351063534|emb|CCD71734.1| Protein F53H1.1 [Caenorhabditis elegans]
Length = 970
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 175/332 (52%), Gaps = 63/332 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRL-----------------GRRLPAEDSHSASDYEL 57
E DPLDAFM ++ A+ N + G+ L ED+ +
Sbjct: 175 EEDPLDAFMKEIATKNAKKTGNSTQKASGIVTIVQEEKPEPEKGQVLENEDNMDMVIDDF 234
Query: 58 FMKRAKKKKRDKNREIIKS-KIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKI 111
++ A K R + ++ K+ Y++ +KNFY + EI RM+ A YR++LD + +
Sbjct: 235 DIETAAASLCHKGRMLAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITV 294
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGK 171
+ PKPIKTW Q G+ K++ K + P +IQA A I+SG D + I +TGSGK
Sbjct: 295 KGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGK 354
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR----------------- 214
TLAFLLPM RHI +QP + GD P+ +++APT EL Q +
Sbjct: 355 TLAFLLPMFRHILDQPELEEGD-GPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYG 413
Query: 215 ----------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252
GRMID+L N K+TNL RVTYLVLDEADRMFD GFEP
Sbjct: 414 GVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEP 473
Query: 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
QI ++V NIRPD+Q VLFS TFP +E LARK
Sbjct: 474 QIMKVVNNIRPDKQTVLFSATFPRHMEALARK 505
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 68/133 (51%), Gaps = 15/133 (11%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFI-S 339
KT V + +A SV ARGLD K L LV+N+D PN YEDYVH ++ K A+ F+
Sbjct: 599 KTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLP 658
Query: 340 EENAIYATDLVKAFELSELVVRDDLKAVADSFIA-------KVNLGLGQVHGTGH----G 388
E A ++ +AFE + DLKA+ + F + +V LG G+G+ G
Sbjct: 659 EHQEKMAGEICRAFETAGCKPPADLKAMFERFKSEMAAEGKEVKLGGKGFEGSGYKYDEG 718
Query: 389 GVALNLMKRRIRR 401
+ K+R+ R
Sbjct: 719 EAEADANKKRMTR 731
>gi|405962641|gb|EKC28298.1| Putative ATP-dependent RNA helicase DDX46 [Crassostrea gigas]
Length = 913
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 121/270 (44%), Positives = 161/270 (59%), Gaps = 48/270 (17%)
Query: 59 MKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIRE 113
M KKK+D I+ + KI Y RKNFY + EI RM+ AYR +L+ +K+R
Sbjct: 186 MLNMNKKKKDT---IVVNHDKIYYASFRKNFYVEVPEIARMTTEEVEAYRTELEGIKVRG 242
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K PKPIK+W Q G + K+++ F K + E P IQ+ A I+SG D + I +TGSGKTL
Sbjct: 243 KNCPKPIKSWAQCGCSKKVMDVFRKNSFEKPTPIQSQAIPAIMSGRDLIGIAKTGSGKTL 302
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
AFL+P+ RHI +QPP + +D P+ ++M PT EL Q
Sbjct: 303 AFLIPLFRHIMDQPP-LDENDGPIAIIMTPTRELAMQITSECKKFTKPLGLKAVCVYGGT 361
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
+++R GRMID+L N ++TNL R TY+VLDEADRMFDMGFEPQ+
Sbjct: 362 GISEQIAELKRGCEIIVCTPGRMIDMLSANNGRVTNLRRCTYVVLDEADRMFDMGFEPQV 421
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
T+IV +IRPDRQ V+FS TFP ++E LARK
Sbjct: 422 TKIVDSIRPDRQTVMFSATFPRQMEALARK 451
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 86/190 (45%), Gaps = 18/190 (9%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K L +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K AF
Sbjct: 540 IVDFKNGNVKLLVATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGYAFT 599
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNL-GLGQVHGTGHGGVALNLM 395
FI+ E YA D++KA ELS V DL+ + + + + G +G G
Sbjct: 600 FITPEQERYAGDIIKALELSGATVNADLEKLWNDYKERAKAEGKTVKSSSGFLGKGFKFD 659
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSK 455
+ + + +K Q G DS+D D G DI Q I + A+
Sbjct: 660 ETEAQLANERKKLQKAALGL----QDSDDEDTGV-----DIDQQ-----IEDMFASVKRV 705
Query: 456 ASASTPSLIS 465
+ P +IS
Sbjct: 706 TDIAKPQVIS 715
>gi|452848275|gb|EME50207.1| hypothetical protein DOTSEDRAFT_68922 [Dothistroma septosporum
NZE10]
Length = 936
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 133/326 (40%), Positives = 177/326 (54%), Gaps = 62/326 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRL------------PAEDSHSASDYELFMKRA 62
E+DPLDAFM+D+ S P +G+R P D+ + +L
Sbjct: 174 EVDPLDAFMSDLGQSMERAPA-PRSIGKRANRGTQLFDEDDGPDLDAVGDNPEDLLSNPK 232
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAP 117
+KKK N + KI+Y+ +RKNFY ++ E+ MS R LD +++R P
Sbjct: 233 RKKKEVPNVD----HSKIEYETIRKNFYNESIEMAEMSQEDVDKLRADLDNIQVRGLDVP 288
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
KP+ W Q G ILE E+P +IQ A I+SG D++ I +TGSGKTLAF+L
Sbjct: 289 KPVTKWSQCGFGAAILEVIRDQKFESPTSIQCQALPAIMSGRDTIGIAKTGSGKTLAFVL 348
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------------- 210
PM RHI +Q PV + P+G++MAPT EL Q
Sbjct: 349 PMFRHIKDQRPVA-NLEGPIGIIMAPTRELAVQIHRECKPYLKALSLRGVCAYGGAPIKD 407
Query: 211 ---QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+++R GRMIDLL N ++TNL+RVTY+V+DEADRMFDMGFEPQIT+I+
Sbjct: 408 QIAELKRGAEVVVCTPGRMIDLLAANAGRVTNLSRVTYVVMDEADRMFDMGFEPQITKIL 467
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARK 284
NIRPDRQ V FS TFP ++E LARK
Sbjct: 468 GNIRPDRQTVTFSATFPKKMESLARK 493
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFR 336
IL K + + +A SV ARGLD K+L+LVIN+D+PN EDYVH ++ A
Sbjct: 585 ILDFKAGIIPIMVATSVAARGLDVKQLKLVINYDSPNHGEDYVHRAGRTGRAGQTGTAVT 644
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGG 389
++ E +A LV+A + S+ V +L+ +A + KV G G+G GG
Sbjct: 645 LLTPEQERFAPFLVRALQDSKQEVPQELQEMAANHKKKVQSGEATNAGSGFGG 697
>gi|324502886|gb|ADY41264.1| ATP-dependent RNA helicase DDX46 [Ascaris suum]
Length = 784
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 114/249 (45%), Positives = 148/249 (59%), Gaps = 44/249 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
K+ Y+ RK+FY + E+ +M+ YR++LD+++R K PKP+++W Q G+ KIL
Sbjct: 78 KVYYRPFRKDFYVETAELAKMTKKEVDQYREELDIRVRGKNCPKPVRSWAQCGVEWKILN 137
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
T KL + P AIQA A I+SG D + I +TGSGKTLAFLLPM RHI +QP + D
Sbjct: 138 TLKKLEYTKPTAIQAQAIPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHIMDQPE-LEELD 196
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+ ++M+PT EL Q + G
Sbjct: 197 GPIAVIMSPTRELAMQTWKEANKFAKPLNIRVACVYGGVGISDQIGDLKRGAEVIVCTVG 256
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ D+L N K+TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TFP
Sbjct: 257 RLTDMLAANKGKVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATFP 316
Query: 276 PRVEILARK 284
++E LARK
Sbjct: 317 RQMEALARK 325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K+L LV+N+D PN YEDYVH ++ K A+
Sbjct: 414 ILDFKAAKIKLLVATSVAARGLDVKKLILVVNYDCPNHYEDYVHRVGRTGRAGNKGYAYT 473
Query: 337 FI-SEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHG 388
FI A ++ +AFE + + LK + + + A++ VH G G
Sbjct: 474 FILPHGQERMAGEVCRAFETASKEPPEQLKKIWEDYKAQMAAEGKTVHMGGCG 526
>gi|324502742|gb|ADY41204.1| ATP-dependent RNA helicase DDX46 [Ascaris suum]
Length = 973
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/249 (45%), Positives = 148/249 (59%), Gaps = 44/249 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
K+ Y+ RK+FY + E+ +M+ YR++LD+++R K PKP+++W Q G+ KIL
Sbjct: 267 KVYYRPFRKDFYVETAELAKMTKKEVDQYREELDIRVRGKNCPKPVRSWAQCGVEWKILN 326
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
T KL + P AIQA A I+SG D + I +TGSGKTLAFLLPM RHI +QP + D
Sbjct: 327 TLKKLEYTKPTAIQAQAIPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHIMDQPELEEL-D 385
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+ ++M+PT EL Q + G
Sbjct: 386 GPIAVIMSPTRELAMQTWKEANKFAKPLNIRVACVYGGVGISDQIGDLKRGAEVIVCTVG 445
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ D+L N K+TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TFP
Sbjct: 446 RLTDMLAANKGKVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATFP 505
Query: 276 PRVEILARK 284
++E LARK
Sbjct: 506 RQMEALARK 514
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K+L LV+N+D PN YEDYVH ++ K A+
Sbjct: 603 ILDFKAAKIKLLVATSVAARGLDVKKLILVVNYDCPNHYEDYVHRVGRTGRAGNKGYAYT 662
Query: 337 FI-SEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHG 388
FI A ++ +AFE + + LK + + + A++ VH G G
Sbjct: 663 FILPHGQERMAGEVCRAFETASKEPPEQLKKIWEDYKAQMAAEGKTVHMGGCG 715
>gi|312066551|ref|XP_003136324.1| RNA helicase [Loa loa]
gi|307768519|gb|EFO27753.1| RNA helicase [Loa loa]
Length = 952
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 113/249 (45%), Positives = 148/249 (59%), Gaps = 44/249 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
K+ Y+ RKNFY + E+ +++ YR++LD+++R K PKP+++W Q G+ KIL
Sbjct: 246 KVYYRPFRKNFYVETAELAKITKKEVDEYREELDIRVRGKNCPKPVRSWAQCGVEWKILS 305
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
T KL ++ P IQ+ A IISG D + I +TGSGKTLAFLLPM RHI +QP + D
Sbjct: 306 TLKKLEYKKPTPIQSQAIPAIISGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEM-D 364
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+ ++M+PT EL Q + G
Sbjct: 365 GPIAVIMSPTRELAMQTWKEANKFAKQLDIRVACVYGGVGISDQIGDLKRGAEVVVCTVG 424
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ D+L N K+TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TFP
Sbjct: 425 RLTDMLAANKGKVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATFP 484
Query: 276 PRVEILARK 284
++E LARK
Sbjct: 485 RQMEALARK 493
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K+L LV+N+D PN YEDYVH ++ K A+
Sbjct: 582 ILDYKAGKIKLLVATSVAARGLDIKKLILVVNYDCPNHYEDYVHRVGRTGRAGNKGYAYT 641
Query: 337 FI---SEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHG 388
FI +E A ++ +AFE + + LK + + + A + VH G G
Sbjct: 642 FILPTGQER--MAGEVCRAFETAGKEPPEQLKKMWEDYKAHMAAEGKTVHIGGCG 694
>gi|402591636|gb|EJW85565.1| DEAD box RNA helicase [Wuchereria bancrofti]
Length = 952
Score = 218 bits (554), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 114/249 (45%), Positives = 147/249 (59%), Gaps = 44/249 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
K+ Y+ RKNFY + E+ +++ YR++LD+++R K PKPI++W Q G+ KIL
Sbjct: 246 KVYYRPFRKNFYVETAELAKITKKEVDEYREELDIRVRGKNCPKPIRSWAQCGVEWKILS 305
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
T KL ++ P IQ A IISG D + I +TGSGKTLAFLLPM RHI +QP + D
Sbjct: 306 TLKKLEYKKPTPIQCQAIPAIISGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEM-D 364
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+ ++M+PT EL Q + G
Sbjct: 365 GPIAVIMSPTRELAMQTWKEANKFAKQLDVRVACVYGGVGISDQIGDLKRGAEVVVCTVG 424
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ D+L N K+TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TFP
Sbjct: 425 RLTDMLAANKGKVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATFP 484
Query: 276 PRVEILARK 284
++E LARK
Sbjct: 485 RQMEALARK 493
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 59/115 (51%), Gaps = 8/115 (6%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K+L LV+N+D PN YEDYVH ++ K A+
Sbjct: 582 ILDYKAGKIKLLVATSVAARGLDIKKLILVVNYDCPNHYEDYVHRVGRTGRAGNKGYAYT 641
Query: 337 FI---SEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHG 388
FI +E A ++ +AFE + + LK + + + A + VH G G
Sbjct: 642 FILPTGQER--MAGEVCRAFETAGKDPPEQLKKMWEDYKAHMAAEGKTVHIGGCG 694
>gi|196012612|ref|XP_002116168.1| hypothetical protein TRIADDRAFT_30653 [Trichoplax adhaerens]
gi|190581123|gb|EDV21201.1| hypothetical protein TRIADDRAFT_30653 [Trichoplax adhaerens]
Length = 976
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 122/283 (43%), Positives = 161/283 (56%), Gaps = 48/283 (16%)
Query: 46 AEDSHSASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA--- 102
A + S D + +KKK+D N I KI Y ++NFY + E+ +M+
Sbjct: 229 AMEYSSEEDDQTLEDLMEKKKKDVN---IVDHSKIYYAPFKRNFYVEVPELAKMTSEEAD 285
Query: 103 -YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLD 160
R QL+ +K+R K P P+K W Q GL+ K+L++ ++ +E P +QA A I+SG D
Sbjct: 286 DVRLQLENIKVRGKGCPTPVKNWAQCGLSVKLLDSLKRVKYEKPTPVQAQAIPSIMSGRD 345
Query: 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR------ 214
+ I +TGSGKTLAFLLPM RHI +Q + PG D P+GL+M PT EL Q R
Sbjct: 346 VIGIAKTGSGKTLAFLLPMFRHILDQNALSPG-DGPIGLIMTPTRELAIQITRECRRFTK 404
Query: 215 ---------------------------------GRMIDLLCKNGVKITNLTRVTYLVLDE 241
GRMID+L N ++TNL RVTYLVLDE
Sbjct: 405 AIGMHVVCVYGGTGISEQIAELKRGAEIVVCTPGRMIDMLLANNGRVTNLRRVTYLVLDE 464
Query: 242 ADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
ADRMFDMGFEPQ+ +IV++IRPDRQ V+FS TFP ++E LARK
Sbjct: 465 ADRMFDMGFEPQVMKIVESIRPDRQTVMFSATFPRQMEALARK 507
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 97/206 (47%), Gaps = 16/206 (7%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K V L +A SV ARGLD K L LV+N+D PN YEDYVH ++ K A+
Sbjct: 596 IVDYKNGVIKLLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRAGRTGRAGNKGYAYT 655
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNL-GLGQVHGTGHGGVALNLM 395
I+E+ YA D+++A ELS+ + + L+ + + ++ G G G
Sbjct: 656 LITEDQGKYAGDIIRALELSKNSIPESLEKLWSDYKEELKAQGKHIAKNRGFSGKGFKFD 715
Query: 396 KRRIRRGKQLRKAQAKEYGF-------GEDKSDSEDVDEGTRKSGGDISHQDSIAKIATI 448
+ + + +K Q K G ++ + +DE +GG I S I+ +
Sbjct: 716 EAERAQMNEFKKQQKKLLGLEDSDEEDDDEVEVDQQIDEIFNSTGG-IKETVSSGLISAL 774
Query: 449 AAASN----SKASASTPSLISVAQLL 470
++ S+ S+AS + S AQ+L
Sbjct: 775 SSNSSETTASQASKLAKAAESAAQIL 800
>gi|159475485|ref|XP_001695849.1| hypothetical protein CHLREDRAFT_118630 [Chlamydomonas reinhardtii]
gi|158275409|gb|EDP01186.1| predicted protein [Chlamydomonas reinhardtii]
Length = 710
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 120/247 (48%), Positives = 151/247 (61%), Gaps = 43/247 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA---YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETF 136
IDY RKNFY + E+TR++ Q +K+R K P P+++W Q GL+++ILE
Sbjct: 10 IDYPPFRKNFYIEVTELTRLTHVRGFAGPQEGIKVRGKNIPAPVRSWTQAGLSSRILEVL 69
Query: 137 SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSP 196
K + P+ IQA A +I+SG D + I +TGSGKT AF+LPM+RHI +Q P+ G D P
Sbjct: 70 KKRGFDRPLPIQAQALPIIMSGRDCIGIAKTGSGKTGAFVLPMMRHIKDQRPLEQG-DGP 128
Query: 197 VGLVMAPTGELVRQ------------------------------QVRR---------GRM 217
V LV+APT ELV Q +++R GRM
Sbjct: 129 VALVIAPTRELVAQIAKEAKAFAKPLGLNALAVFGGSGVANQITELKRGVEIVACTPGRM 188
Query: 218 IDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPR 277
IDLL + KITNL RVTYLV+DEADRMFDMGFEPQI+RI+QNIRPDRQ V+FS TFP
Sbjct: 189 IDLLVTSNGKITNLRRVTYLVMDEADRMFDMGFEPQISRIIQNIRPDRQTVMFSATFPRA 248
Query: 278 VEILARK 284
VE LARK
Sbjct: 249 VEALARK 255
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/137 (45%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCC-----QSWLKSCAFRFI 338
K VCN+ +A S+ ARGLD K+L LV+N+D PN +EDYVH C ++ K A FI
Sbjct: 348 KGAVCNILVATSIAARGLDVKDLVLVVNYDVPNHHEDYVHRCVVGRTGRAGAKGTAITFI 407
Query: 339 SEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRR 398
SEE YA DLVKA S V DL+A+ADSF K GL + HG+G+GG
Sbjct: 408 SEEEERYAPDLVKALRESGAPVPQDLQALADSFNTKHKAGLVKAHGSGYGGSGFKFDTNE 467
Query: 399 IRRGKQLRKAQAKEYGF 415
R + +KA+AK G
Sbjct: 468 EERHRTDKKAKAKAMGL 484
>gi|170589285|ref|XP_001899404.1| KIAA0801 protein [Brugia malayi]
gi|158593617|gb|EDP32212.1| KIAA0801 protein, putative [Brugia malayi]
Length = 964
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 121/288 (42%), Positives = 159/288 (55%), Gaps = 63/288 (21%)
Query: 41 GRRLPAEDSHSASDYE-LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRM 99
GR+LP D A+ ++ L+ I + Y+ RKNFY + E+ ++
Sbjct: 237 GRQLPQTDHSKATTFQDLYC------------------IFVYYRPFRKNFYVETAELAKI 278
Query: 100 SPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALI 155
+ YR++LD+++R K PKPI++W Q G+ KIL T KL ++ P IQ A I
Sbjct: 279 TKKEVDEYREELDIRVRGKNCPKPIRSWAQCGVEWKILSTLKKLEYKKPTPIQCQAIPAI 338
Query: 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR- 214
ISG D + I +TGSGKTLAFLLPM RHI +QP + D P+ ++M+PT EL Q +
Sbjct: 339 ISGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEM-DGPIAVIMSPTRELAMQTWKEA 397
Query: 215 --------------------------------------GRMIDLLCKNGVKITNLTRVTY 236
GR+ D+L N K+TNL RVTY
Sbjct: 398 NKFAKQLNVRVACVYGGVGISDQIGDLKRGAEVVVCTVGRLTDMLAANKGKVTNLRRVTY 457
Query: 237 LVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
LVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TFP ++E LARK
Sbjct: 458 LVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATFPRQMEALARK 505
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K+L LV+N+D PN YEDYVH ++ K A+
Sbjct: 594 ILDYKAGKIKLLVATSVAARGLDIKKLILVVNYDCPNHYEDYVHRVGRTGRAGNKGYAYT 653
Query: 337 FI---SEENAIYATDLVKAFELSELVVRDDLKAVADSFIA 373
FI +E A ++ +AFE + + LK + + + A
Sbjct: 654 FILPTGQER--MAGEVCRAFETAGKEPPEQLKKMWEDYKA 691
>gi|303324443|ref|XP_003072209.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240111919|gb|EER30064.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 1197
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/328 (39%), Positives = 182/328 (55%), Gaps = 60/328 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHS-----------ASDYEL--FMKR 61
EIDPLDAFM+ ++ S + +R P ++ + A D+E F+
Sbjct: 437 EIDPLDAFMSGLKDSVTVDASK-YRKNVSKPKQEPEAIFGDEDDVDLKAMDFEADDFLAI 495
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
K ++ K+ + + KIDY+ RK+FYT+ ++ ++ A R +LD +K+R
Sbjct: 496 TSKTRKKKDLPTVNHE-KIDYEPFRKSFYTEPVDLAELNDEEVAALRLELDGIKVRGVDV 554
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+AFL
Sbjct: 555 PKPVQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFL 614
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 615 LPMFRHIKDQRP-LENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIK 673
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 674 DQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 733
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT 285
+ NIRP RQ VLFS TFP +E LARKT
Sbjct: 734 ISNIRPSRQTVLFSATFPRNMEALARKT 761
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++E
Sbjct: 858 KAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 917
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 918 EQERYSVDIAKALKQSGQSVPEAVQKMVDSFLEKVKSGKEKASASGFGGKGLERL 972
>gi|320037247|gb|EFW19185.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coccidioides
posadasii str. Silveira]
Length = 853
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/328 (39%), Positives = 182/328 (55%), Gaps = 60/328 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHS-----------ASDYEL--FMKR 61
EIDPLDAFM+ ++ S + +R P ++ + A D+E F+
Sbjct: 93 EIDPLDAFMSGLKDSVTVDASK-YRKNVSKPKQEPEAIFGDEDDVDLKAMDFEADDFLAI 151
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
K ++ K+ + + KIDY+ RK+FYT+ ++ ++ A R +LD +K+R
Sbjct: 152 TSKTRKKKDLPTVNHE-KIDYEPFRKSFYTEPVDLAELNDEEVAALRLELDGIKVRGVDV 210
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+AFL
Sbjct: 211 PKPVQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFL 270
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 271 LPMFRHIKDQRP-LENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIK 329
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 330 DQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 389
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT 285
+ NIRP RQ VLFS TFP +E LARKT
Sbjct: 390 ISNIRPSRQTVLFSATFPRNMEALARKT 417
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++E
Sbjct: 514 KAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 573
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
E Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L
Sbjct: 574 EQERYSVDIAKALKQSGQSVPEAVQKMVDSFLEKVKSGKEKASASGFGGKGL 625
>gi|189240548|ref|XP_973126.2| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 984
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 150/249 (60%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + EI +M+ AY+++L+ ++++ K PKPIKTW Q G++TK L
Sbjct: 279 VRYLPFRKNFYVEVPEIAKMTHEEVEAYKEELEGIRVKGKGCPKPIKTWAQCGVSTKELN 338
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQ A I+SG D + I +TGSGKTLAFLLPM RHI +QPP+ D
Sbjct: 339 ILKKLGFEKPTPIQVQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLEEL-D 397
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ ++M PT EL Q +++R G
Sbjct: 398 GPIAIIMTPTRELCMQIGKDIKKFTKSLNLHAVCVYGGTGISEQIAELKRGAEIIVCTPG 457
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L NG K+TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 458 RMIDMLAANGGKVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 517
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 518 RQMEALARR 526
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 615 IIDFKSGKVKLLIATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYT 674
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E + YA D+++AFEL+ + + D L+A+ DS+ +K +VH
Sbjct: 675 FITPEQSRYAGDIIRAFELASVPIPDPLRALWDSYKSKQEAEGKKVH 721
>gi|270011364|gb|EFA07812.1| hypothetical protein TcasGA2_TC005373 [Tribolium castaneum]
Length = 1007
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/249 (46%), Positives = 150/249 (60%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + EI +M+ AY+++L+ ++++ K PKPIKTW Q G++TK L
Sbjct: 302 VRYLPFRKNFYVEVPEIAKMTHEEVEAYKEELEGIRVKGKGCPKPIKTWAQCGVSTKELN 361
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQ A I+SG D + I +TGSGKTLAFLLPM RHI +QPP+ D
Sbjct: 362 ILKKLGFEKPTPIQVQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLEEL-D 420
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ ++M PT EL Q +++R G
Sbjct: 421 GPIAIIMTPTRELCMQIGKDIKKFTKSLNLHAVCVYGGTGISEQIAELKRGAEIIVCTPG 480
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L NG K+TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 481 RMIDMLAANGGKVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 540
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 541 RQMEALARR 549
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 638 IIDFKSGKVKLLIATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYT 697
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E + YA D+++AFEL+ + + D L+A+ DS+ +K +VH
Sbjct: 698 FITPEQSRYAGDIIRAFELASVPIPDPLRALWDSYKSKQEAEGKKVH 744
>gi|126632201|gb|AAI33101.1| Ddx46 protein [Danio rerio]
Length = 1032
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 165/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSPA----Y 103
+S+ + E+ ++ A + K R++++ KI Y+ RKNFY + E+ RMSP Y
Sbjct: 276 YSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFRKNFYVEVPELARMSPEEVSEY 335
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +L+ + ++ K PKPIKTW Q G++ K+L K N+E P IQA A I+SG D +
Sbjct: 336 RLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLI 395
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q PV + P+ ++M PT EL Q
Sbjct: 396 GIAKTGSGKTIAFLLPMFRHILDQRPVGEA-EGPLAVIMTPTRELALQITKECKKFSKSL 454
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+V+DEAD
Sbjct: 455 ALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEAD 514
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 515 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARR 555
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 19/204 (9%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K+L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 648 KNGACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRARNKGYAYTFITE 707
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQV--HGTGHGGVALNLMKRR 398
A Y+ D++KA ELS V +L+ + +F + G++ +G G +
Sbjct: 708 GQARYSGDILKALELSGSSVPAELEQLWTNF-KEQQKAEGKIIKSSSGFSGKGFKFDETE 766
Query: 399 IRRGKQLRKAQAKEYGF--GEDKSDSEDVDE------GTRKSGGDISHQDSIAK-----I 445
+ +K Q G +D+ + D+DE ++K D S S++ +
Sbjct: 767 HALANERKKLQKAALGLHDSDDEDTALDIDEQIESMFNSKKRVKDFSAPGSVSAGSAGGV 826
Query: 446 ATIAAASNSKASASTPSLISVAQL 469
+ +A + S STPS ++ +L
Sbjct: 827 SGSVSAVSGLGSLSTPSAGNIQKL 850
>gi|67459931|ref|NP_001019988.1| probable ATP-dependent RNA helicase DDX46 [Danio rerio]
gi|82277867|sp|Q4TVV3.1|DDX46_DANRE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|66473312|gb|AAY46301.1| DEAD box protein 46 [Danio rerio]
Length = 1018
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 165/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSPA----Y 103
+S+ + E+ ++ A + K R++++ KI Y+ RKNFY + E+ RMSP Y
Sbjct: 262 YSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFRKNFYVEVPELARMSPEEVSEY 321
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +L+ + ++ K PKPIKTW Q G++ K+L K N+E P IQA A I+SG D +
Sbjct: 322 RLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLI 381
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q PV + P+ ++M PT EL Q
Sbjct: 382 GIAKTGSGKTIAFLLPMFRHILDQRPVGEA-EGPLAVIMTPTRELALQITKECKKFSKSL 440
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+V+DEAD
Sbjct: 441 ALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEAD 500
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 501 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARR 541
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K+L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 634 KNGACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 693
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQV--HGTGHGGVALNLMKRR 398
A Y+ D++KA ELS V +L+ + +F + G++ +G G +
Sbjct: 694 GQARYSGDILKALELSGSSVPAELEQLWTNF-KEQQKAEGKIIKSSSGFSGKGFKFDETE 752
Query: 399 IRRGKQLRKAQAKEYGFGEDKSDSE----DVDE------GTRKSGGDISHQDSIAK---- 444
+ +K Q ++ G SD E D+DE ++K D S S++
Sbjct: 753 HALANERKKLQ--KWALGLHDSDDEDTALDIDEQIESMFNSKKRVKDFSAPGSVSAGSAG 810
Query: 445 -IATIAAASNSKASASTPSLISVAQL 469
++ +A + S STPS ++ +L
Sbjct: 811 GVSGSVSAVSGLGSLSTPSAGNIQKL 836
>gi|312371167|gb|EFR19420.1| hypothetical protein AND_22552 [Anopheles darlingi]
Length = 1161
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/375 (37%), Positives = 188/375 (50%), Gaps = 89/375 (23%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASD---YELFMKRAKKKKRDKNR 71
EIDPLDA+M D+ E +L +P D S+ + AK+K K
Sbjct: 343 EIDPLDAYMRDVN----EEVRKVNKLANPMPKSDGKSSGTTGGVTIITGVAKQKTEAKKG 398
Query: 72 EIIK--------------------------------SKIK---IDYQQLRKNFYTQAREI 96
E+I+ +KI I+Y RK FY + EI
Sbjct: 399 ELIEQNQDGLEYSSEEEQEDIKDTAANLANKQKKELAKIDHSGINYLPFRKLFYVEVPEI 458
Query: 97 TRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPA 151
RM+ AY+K+L+ + ++ K PKPIKTW G++ K E KL E P IQ A
Sbjct: 459 ARMTQTEVDAYKKELEGIAVKGKGCPKPIKTWAHCGVSRKEFEVLRKLGFEKPTPIQCQA 518
Query: 152 SALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ- 210
I+SG D + I +TGSGKTLAF+LPM RHI +QPP+ G D P+ ++M PT EL Q
Sbjct: 519 IPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPPLEDG-DGPIAIIMTPTRELCMQI 577
Query: 211 -----------------------------QVRR---------GRMIDLLCKNGVKITNLT 232
+++R GRMID+L N ++TNL
Sbjct: 578 GKDIKKFSKSLNLRTVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLR 637
Query: 233 RVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSI 292
RVTY+VLDEADRMFDMGFEPQ+ RI+ NIRPDRQ V+FS TFP ++E LAR+ + I
Sbjct: 638 RVTYIVLDEADRMFDMGFEPQVMRIIDNIRPDRQTVMFSATFPRQMEALARR--ILKKPI 695
Query: 293 ANSVRARGLDEKELE 307
V R + KE+E
Sbjct: 696 EVQVGGRSVVCKEVE 710
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+ F++
Sbjct: 782 KQGRVKLLIATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWTFLTP 841
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
E YA D+++A ELS V +DL+ + D++ + +VH
Sbjct: 842 EQGRYAGDIIRALELSGGTVPEDLRQLWDTYKSAQEAEGKKVH 884
>gi|303274675|ref|XP_003056653.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461005|gb|EEH58298.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1177
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/279 (42%), Positives = 158/279 (56%), Gaps = 45/279 (16%)
Query: 49 SHSASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQL- 107
+ S D E + ++ K K ++ + IDY RKNFY ++ EI +++ K+L
Sbjct: 406 ASSDDDDEAWARKQKSKLSKADKLGLADHASIDYAPFRKNFYIESYEIAKLTKEQTKELR 465
Query: 108 ----DLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVA 163
+K R K PKPIKTW Q GL+ +++E + E P+ IQ +I+SG D +A
Sbjct: 466 AELEGIKCRGKDVPKPIKTWAQAGLSNRVMELIRRSGFEKPMPIQCQCLPVIMSGRDCIA 525
Query: 164 ITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------- 210
+ +TGSGKTL ++LPMLRHI +Q + G D PVG++M PT ELV Q
Sbjct: 526 VAKTGSGKTLGYILPMLRHIKDQREIAQG-DGPVGMIMGPTRELVTQIGKDCRKFGRCAG 584
Query: 211 -----------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADR 244
+++R GRMID+L +ITNL RVTY VLDEADR
Sbjct: 585 MVAVSVYGGSGVAAQIGELKRGCEIVACTPGRMIDILTTGAGRITNLRRVTYFVLDEADR 644
Query: 245 MFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
MFDMGFEPQITRI+ N+RPDRQ V+FS TFP +E LAR
Sbjct: 645 MFDMGFEPQITRIMNNLRPDRQTVMFSATFPHAMEALAR 683
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K++VCN+ +A SV ARGLD K+L LVIN+D PN EDYVH ++ K A FISE
Sbjct: 777 KSDVCNILVATSVAARGLDVKDLRLVINYDTPNHLEDYVHRVGRTGRAGNKGTAVTFISE 836
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGL 379
E +A DLVKA ++ V DL+ +AD++ K GL
Sbjct: 837 EEEKFAPDLVKAMTDAKQPVPADLRTMADAYSKKKKEGL 875
>gi|221105444|ref|XP_002161749.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Hydra
magnipapillata]
Length = 1335
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/280 (42%), Positives = 158/280 (56%), Gaps = 48/280 (17%)
Query: 67 RDKNREI-IKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQL-DLKIREKCAPKPI 120
R K +E+ + KI Y R+ FY + E+ +M+ YR+ L D+++R K PKPI
Sbjct: 613 RKKKKELTVADHTKIYYPPFRRAFYVEVPELAKMTQEEVKLYRESLGDIQVRGKSIPKPI 672
Query: 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPML 180
KTW Q G++TK+L KL +E P IQA A I+SG D + I +TGSGKTLAFL+P+
Sbjct: 673 KTWSQAGVSTKVLAVLKKLKYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFLIPLF 732
Query: 181 RHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR-------------------------- 214
RH+ +QPP + +D P+ ++M PT EL Q R
Sbjct: 733 RHVIDQPP-LDENDGPIAIIMTPTRELALQIFREAKKFCKQLNLTAACIYGGSGISEQIA 791
Query: 215 -------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI 261
GRMID+L N ++TN R TYLV+DEADRMFDMGFEPQ+ RI+ NI
Sbjct: 792 ELKKGAEIIVCTPGRMIDMLTANNGRVTNCRRCTYLVMDEADRMFDMGFEPQVMRILDNI 851
Query: 262 RPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
RPDRQ VLFS TFP ++E +ARK V N I V R +
Sbjct: 852 RPDRQTVLFSATFPRQMEAIARK--VLNKPIEVQVGGRSV 889
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V L ++ SV ARGLD K L LV+N+D PN YEDYVH ++ K +F FI+
Sbjct: 967 KNGVTKLMVSTSVAARGLDVKNLVLVLNYDCPNHYEDYVHRVGRTGRAGNKGTSFTFITP 1026
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLG 378
E A D++KAFEL++ D+ + + F ++ L
Sbjct: 1027 EQGRNAGDIIKAFELAKCTPPTDVMELWNKFKLEMQLA 1064
>gi|406862855|gb|EKD15904.1| dead box ATP-dependent rna helicase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1208
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 182/331 (54%), Gaps = 60/331 (18%)
Query: 13 QIEIDPLDAFMNDMECSF-AEHPNNCF-----RLGRRLP----AEDS----HSASDYELF 58
Q E+DPL+AFM+++ F A P N F + +R P +D +D +
Sbjct: 450 QDEVDPLEAFMDELGDPFSAPKPTNSFNRSQSKSQKREPEPLFGDDEVDLKAVEADPDDI 509
Query: 59 MKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIRE 113
+ A K ++ K+ + + K+D + +RKNFY + E+ M+ A R +LD +K+
Sbjct: 510 LAMASKARKKKDLPTV-NYAKLDLEPVRKNFYAEPAELADMTEAELADLRLELDGIKVAG 568
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K PKP++ W Q GL + LE KL +E P AIQ A I+SG D + + +TGSGKT+
Sbjct: 569 KDVPKPVQKWSQCGLNVQSLEVIRKLGYERPTAIQMQAIPAIMSGRDVIGVAKTGSGKTI 628
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
AFLLPM RHI +Q P + G D PVGL++ PT EL Q
Sbjct: 629 AFLLPMFRHIRDQRP-LEGSDGPVGLIVTPTRELATQIHKECKPFLKAMGLRAVCAYGGA 687
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+
Sbjct: 688 PIKDQIADLKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQV 747
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+I NIRPDRQ +LFS T P ++ LA+KT
Sbjct: 748 MKIFANIRPDRQTILFSATMPRIMDALAKKT 778
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+NFDAPN EDYVH ++ K A FI+E
Sbjct: 873 KAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGAKGTAVTFITE 932
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+ Y+ + KA E S V + L + SF KV G + +G GG L
Sbjct: 933 DQEQYSVGIAKALEQSGQPVPERLNEMRKSFRDKVKTGKSK-DSSGFGGKGL 983
>gi|124088187|ref|XP_001346998.1| RNA helicase [Paramecium tetraurelia strain d4-2]
gi|145474579|ref|XP_001423312.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057387|emb|CAH03371.1| RNA helicase, putative [Paramecium tetraurelia]
gi|124390372|emb|CAK55914.1| unnamed protein product [Paramecium tetraurelia]
Length = 1157
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/319 (41%), Positives = 170/319 (53%), Gaps = 49/319 (15%)
Query: 80 IDYQQLRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPIKTWRQTGLTTKILE 134
IDYQ RK+FY + E+ +M+P K+L D+K+R K PKPI+ W Q GL ++L
Sbjct: 457 IDYQPFRKDFYREVSELVQMTPEEAKKLRQQLGDIKVRGKDVPKPIQNWYQCGLNDRVLN 516
Query: 135 TF-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K NP IQA A I+SG D + I ETGSGKTLA+LLP+LRH+ +QP + G
Sbjct: 517 VLIEKKKFINPFPIQAQAVPCIMSGRDFIGIAETGSGKTLAYLLPLLRHVLDQPALKDG- 575
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
D P+ ++MAPT EL Q ++R
Sbjct: 576 DGPIAIIMAPTRELAHQIYVNCRWFTSILNLNVVCCVGGAGIAGQLSDLKRGTEIVVCTP 635
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L + KITNL RVTY+V+DEADRMFD+GFEPQI +I+QNIRPDRQ V+FS TF
Sbjct: 636 GRMIDVLTTSNGKITNLRRVTYVVIDEADRMFDLGFEPQICKIIQNIRPDRQLVMFSATF 695
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSCA 334
P VE LA++ V I V RG +E +I F +D + Q W +
Sbjct: 696 PKNVEQLAKR--VLRKPIECIVGGRGQAGGNIEQIIEFMDESDKLYKLLLLFQEWYTKGS 753
Query: 335 FRFISEENAIYATDLVKAF 353
I E A DL K
Sbjct: 754 I-LIFVEKQTEADDLFKEL 771
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 11/170 (6%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K + + +A SV ARGLD K + LVINF PN EDY+H ++ K A F +
Sbjct: 798 KKGIRTIMVATSVLARGLDIKHICLVINFSCPNHMEDYIHRIGRTGRAGQKGTAITFFTP 857
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH-GTGHGGVALNLMKRRI 399
++ A DLV E SE + + LK SF+ KV G +++ G
Sbjct: 858 QDEHLANDLVYLLEKSEQQLPEKLKEYQKSFMEKVKAGEAKIYRNKNRAGGGFTFGPEEE 917
Query: 400 RRGKQLRKAQAKEYGF-----GEDKSDSEDVDEGTRKSGGDISHQDSIAK 444
++ + R K++G E SD E V E K G +S ++ + K
Sbjct: 918 QKFQDFRAQMRKKFGLEGLMMDEQSSDDEKVLEEIAK--GKLSEEERLKK 965
>gi|255088653|ref|XP_002506249.1| predicted protein [Micromonas sp. RCC299]
gi|226521520|gb|ACO67507.1| predicted protein [Micromonas sp. RCC299]
Length = 1063
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 122/328 (37%), Positives = 176/328 (53%), Gaps = 47/328 (14%)
Query: 48 DSHSASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQL 107
D + D + ++ + + ++ + IDY RKNFY ++ EI RM+ A K+L
Sbjct: 318 DGAGSDDDAEWARKQQSRMSKADKLGVADHDSIDYPPFRKNFYIESYEIARMTKAEVKEL 377
Query: 108 -----DLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
++ R K P+PIKTW Q GL+ +++E + + P+ IQ A +I+SG D +
Sbjct: 378 RAELEGIRCRGKDVPRPIKTWAQAGLSNRVMELIRRSGFDKPMPIQCQALPVIMSGRDCI 437
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
+ +TGSGKTL+++LPMLRH+ +Q P+ G D P+G++M PT ELV Q
Sbjct: 438 GVAKTGSGKTLSYVLPMLRHVKDQRPIESG-DGPIGMIMGPTRELVTQIGKDCKKFGRAA 496
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L +ITNL RVTY+VLDEAD
Sbjct: 497 GLVAVSVYGGSGVATQIGELKRGCEIVACTPGRMIDVLTTGAGRITNLRRVTYMVLDEAD 556
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDE 303
RMFDMGFEPQITRI+ N+RPDRQ V+FS TFP +E LAR + I V R +
Sbjct: 557 RMFDMGFEPQITRIMNNLRPDRQTVMFSATFPHAMEALARSALTNPVEI--QVGGRSVVN 614
Query: 304 KELELVINFDAPNDYEDYVHHCCQSWLK 331
++E ++ A D V W +
Sbjct: 615 SDIEQIVEMRAEEDRFLRVLELLGEWYE 642
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K++VCN+ +A SV ARGLD L LV+N+D PN EDYVH ++ K A FIS+
Sbjct: 690 KSDVCNILVATSVAARGLDVSGLRLVVNYDTPNHLEDYVHRVGRTGRAGNKGTAVTFISQ 749
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGL 379
E +A DLVKA ++ V DL+ +AD + K GL
Sbjct: 750 EEEKFAPDLVKAMTDAKQPVPSDLRLMADEYAKKKKEGL 788
>gi|346322147|gb|EGX91746.1| DEAD/DEAH box RNA helicase [Cordyceps militaris CM01]
Length = 1216
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 130/351 (37%), Positives = 191/351 (54%), Gaps = 58/351 (16%)
Query: 15 EIDPLDAFMNDMEC-SFAEHPNNCFRLGRRLPAEDSH-SASDYELFMKR---------AK 63
++DPLDAFM+D++ P ++LP +++ S +DY + + A
Sbjct: 458 DVDPLDAFMDDLQQKEVKRRPPKKTSTVKKLPEPEAYFSDNDYGYEVDKNAADASAVLAM 517
Query: 64 KKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPK 118
KR K KID Q +RKNF+ + E++ ++ A R +LD +K+ K PK
Sbjct: 518 TNKRKKKDIPTVDYSKIDIQPIRKNFWAEPVELSELNEAEVADLRVELDGIKVNGKDVPK 577
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P++ W Q GLT ++L+ + E P +IQ A ++SG D + + +TGSGKT+AFLLP
Sbjct: 578 PVQKWSQCGLTRQMLDVIDSMGFEKPTSIQMQAIPALMSGRDVIGVAKTGSGKTMAFLLP 637
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGEL---------------------------VRQQ 211
M RHI +QPP+ D P+GL+M+PT EL +R+Q
Sbjct: 638 MFRHIKDQPPLKES-DGPIGLIMSPTRELATQIHRDCKPFLKMMGIRAVCAYGGAPIREQ 696
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+ GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 697 IAELKRGAEIIVCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFA 756
Query: 260 NIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
N+RPD+Q +LFS T P ++ L +K V N + +V R + KE+E ++
Sbjct: 757 NMRPDKQTILFSATMPRIIDSLTKK--VLNSPVEITVGGRSVVAKEIEQIV 805
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A FI+
Sbjct: 877 KKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFITP 936
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E A + KA E SE V + L + + KV G + +G GG L+ +
Sbjct: 937 EQESCAPGIAKALEQSEQPVPERLSEMRKAHREKVKTGKAK-DTSGFGGKGLDRL 990
>gi|341900203|gb|EGT56138.1| hypothetical protein CAEBREN_02977 [Caenorhabditis brenneri]
Length = 982
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 114/251 (45%), Positives = 147/251 (58%), Gaps = 45/251 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
K+ Y++ +KNFY + EI +M+ A YR++LD + ++ PKPIKTW Q GL K++
Sbjct: 267 KVYYRKFKKNFYIETEEIKKMTKAEVKAYREELDSITVKGIDPPKPIKTWAQCGLNLKMM 326
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K + P +IQA A I+SG D + I +TGSGKTLAFLLPM RHI +QP + G
Sbjct: 327 NVLKKHGYTKPTSIQAQAIPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEG- 385
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
D P+ +++APT EL Q +
Sbjct: 386 DGPIAIILAPTRELAMQTYKEANKFAKVLGLRVACTYGGVGISEQIADLKRGAEIVVCTP 445
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L NG K+TNL RVTYLVLDEADRMFD GFEPQI ++V NIRPD+Q VLFS TF
Sbjct: 446 GRMIDMLAANGGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATF 505
Query: 275 PPRVEILARKT 285
P ++ LARK
Sbjct: 506 PRHMDALARKA 516
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFI-SEENAIYAT 347
+A SV ARGLD K L LV+N+D PN YEDYVH ++ K A+ F+ E A
Sbjct: 620 VATSVAARGLDVKNLVLVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLPEHQEKMAG 679
Query: 348 DLVKAFELSELVVRDDLKAVADSFIAKV-----NLGLGQVHGTGHG 388
++ +AFE + +DLKA+ + F ++ + LG GHG
Sbjct: 680 EICRAFETAGCKPPNDLKAMFERFKKEMEAEGKEVKLGGKGFEGHG 725
>gi|345482984|ref|XP_001603634.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Nasonia
vitripennis]
Length = 1039
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 113/248 (45%), Positives = 150/248 (60%), Gaps = 45/248 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
DY K FY + EI RM+P Y+++L+ ++++ K PKPIK+W Q G++ K L+
Sbjct: 329 DYIPFTKAFYREVPEIARMTPEEVELYKEELEGIRVKGKNCPKPIKSWAQCGVSKKELDV 388
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
KL +E P IQ A I+SG D + I +TGSGKT+AFLLPM RHI +QPP+ G D
Sbjct: 389 LRKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQPPLADG-DG 447
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
P+ L+M PT EL Q +++R GR
Sbjct: 448 PIALIMTPTRELCMQIGKDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGR 507
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI++N+RPDRQ VLFS TFP
Sbjct: 508 MIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIMENVRPDRQTVLFSATFPR 567
Query: 277 RVEILARK 284
++E LAR+
Sbjct: 568 QMEALARR 575
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K L +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 664 IMDFKAGRVKLLVATSVAARGLDVKSLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT 723
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHG 388
FI+ + Y+ D+V+AFEL+ + V + L+ + + + + +VH TG G
Sbjct: 724 FITPDQERYSGDIVRAFELAGVPVPEPLRQLWEGYKNRQEADGKKVH-TGGG 774
>gi|119173770|ref|XP_001239279.1| DEAD/DEAH box RNA helicase [Coccidioides immitis RS]
gi|118597491|sp|Q1DHB2.1|PRP5_COCIM RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|392869485|gb|EJB11830.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coccidioides
immitis RS]
Length = 1197
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 181/328 (55%), Gaps = 60/328 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHS-----------ASDYEL--FMKR 61
EIDPLDAFM+ ++ S + +R P ++ + A D+E F+
Sbjct: 437 EIDPLDAFMSGLKDSVTVDASK-YRKNVSKPKQEPEAIFGDEDDVDLKAMDFEADDFLAI 495
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
K ++ K+ + + IDY+ RK+FYT+ ++ ++ A R +LD +K+R
Sbjct: 496 TSKTRKKKDLPTVNHET-IDYEPFRKSFYTEPVDLAELNDEEVAALRLELDGIKVRGVDV 554
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+AFL
Sbjct: 555 PKPVQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFL 614
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 615 LPMFRHIKDQRP-LENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIK 673
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 674 DQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 733
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT 285
+ NIRP RQ VLFS TFP +E LARKT
Sbjct: 734 ISNIRPSRQTVLFSATFPRNMEALARKT 761
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++E
Sbjct: 858 KAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 917
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 918 EQERYSVDIAKALKQSGQSVPEAVQKMVDSFLEKVKSGKEKASASGFGGKGLERL 972
>gi|361130681|gb|EHL02431.1| putative Pre-mRNA-processing ATP-dependent RNA helicase prp5
[Glarea lozoyensis 74030]
Length = 1084
Score = 214 bits (546), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 135/355 (38%), Positives = 186/355 (52%), Gaps = 64/355 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCF------RLGRRLPAEDSHSASDYEL---------FM 59
E+DPLDA+M+ M FA N F ++ ++ P E D EL +
Sbjct: 330 EVDPLDAYMDAMGDPFAAPTNTGFFNKSQGKIRQQEP-EALFGDDDVELKAIEADPDDIL 388
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREK 114
A K ++ K I KID + RKNFYT+ E+ M+ R +LD +K+ K
Sbjct: 389 AMASKSRKKKELPTINYS-KIDLEPFRKNFYTEPAELADMTETELADLRLELDGIKVAGK 447
Query: 115 CAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLA 174
PKP++ W Q GL + L+ KL ++ P AIQ A I+SG D + + +TGSGKT+A
Sbjct: 448 DVPKPVQKWSQCGLNVQSLDVIRKLGYDRPTAIQMQAIPAIMSGRDVIGVAKTGSGKTIA 507
Query: 175 FLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------ 210
F+LP+ RHI +Q P + G D P+GL+M PT EL Q
Sbjct: 508 FMLPIFRHIRDQKP-LEGSDGPIGLIMTPTRELATQIHKECKPFLRAMGLRAVCAYGGAP 566
Query: 211 ------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQIT 255
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+
Sbjct: 567 IKDQIADLKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVM 626
Query: 256 RIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
+I NIRPDRQ +LFS T P ++ LA+KT N + +V R + E+ ++
Sbjct: 627 KIFANIRPDRQTILFSATMPRIMDALAKKT--LNSPVEITVGGRSVVAPEITQIV 679
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+NFDAPN EDYVH ++ A F++E
Sbjct: 751 KAGVIPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTE 810
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+ ++ + KA E S V D L + SF KV G + +G GG L
Sbjct: 811 DQEQFSVGIAKALEQSGQPVPDRLNEMRKSFRDKVKSGKSK-DSSGFGGKGL 861
>gi|367020544|ref|XP_003659557.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
gi|347006824|gb|AEO54312.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
Length = 993
Score = 214 bits (545), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 182/332 (54%), Gaps = 62/332 (18%)
Query: 12 VQIEIDPLDAFMNDMECS-----FAEHPNNCFRLGRRLPAEDSHSASD---YEL------ 57
V ++DPLDAFM D+E + P + G + +++ + D YE
Sbjct: 232 VDEDVDPLDAFMADLEQTGSAGGLGPKPARQEQNGGKGFEPEAYFSDDDFGYEADQADPA 291
Query: 58 -FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKI 111
+ A KKKR I SKI+++ +RKNF+ + +E+++M+ R +LD +K+
Sbjct: 292 AILAMAAKKKRKDIPTIDYSKIELN--PIRKNFWVEPQELSQMTEEEAAELRMELDGIKV 349
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGK 171
K PKP++ W Q GLT IL+ L +E P IQ A +I+SG D + + +TGSGK
Sbjct: 350 SGKNVPKPVQKWSQCGLTRPILDVIEGLGYEKPTPIQMQALPVIMSGRDVIGVAKTGSGK 409
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------- 210
T+AF+LPMLRHI +Q P V GDD P+GL+M PT EL Q
Sbjct: 410 TMAFVLPMLRHIKDQDP-VSGDDGPIGLIMTPTRELCTQIYTDLQPFAKALKLRAVAAYG 468
Query: 211 ---------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252
+++R GRMIDLL N ++TNL R TY+VLDEADRMFDMGFEP
Sbjct: 469 GNAIKDQIAELKRGAEIIVATPGRMIDLLAANSGRVTNLKRATYIVLDEADRMFDMGFEP 528
Query: 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
Q+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 529 QVMKIFNNVRPDRQTILFSATMPRIIDALTKK 560
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISE 340
K VC + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 656 KKGVCPIMIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTP 715
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S V + L + S+ KV G + +G GG L + +
Sbjct: 716 EQENCAPGIAKALEQSGQPVPEQLNEMRKSWREKVKAGKAK-DASGFGGKGLERLDKERE 774
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRK 431
+ + K G +D D E ++ ++
Sbjct: 775 AARMRERKSHKAEGEEDDFKDEETAEDAAKR 805
>gi|357615888|gb|EHJ69887.1| DEAD box RNA helicase [Danaus plexippus]
Length = 992
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 148/249 (59%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+DY RK FYT+ E+ RM+P AYR +L+ ++++ K PKPIK W G++ K L+
Sbjct: 288 LDYMSFRKAFYTEVSELARMTPEEVEAYRTELEGIRVKGKGCPKPIKNWAHCGISKKELD 347
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQA A I+SG D + I +TGSGKTLAF+LPM RH+ +QP + D
Sbjct: 348 ILKKLGFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPQ-LEDTD 406
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ L+M PT EL Q +++R G
Sbjct: 407 GPISLIMTPTRELCMQIGKDIKKFAKSLGLRVVCVYGGTGISEQIAELKRGAEMIVCTPG 466
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ N+RPDRQ V+FS TFP
Sbjct: 467 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMKIIDNVRPDRQTVMFSATFP 526
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 527 RQMEALARR 535
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K L +A SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 624 IVDFKNGKVKLLVATSVAARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAWT 683
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSF 371
F++ E YA D+++A E + +L+A+ D +
Sbjct: 684 FLTPEQGRYAGDVLRALEAAGASPPAELRALWDKY 718
>gi|302502646|ref|XP_003013284.1| hypothetical protein ARB_00469 [Arthroderma benhamiae CBS 112371]
gi|291176847|gb|EFE32644.1| hypothetical protein ARB_00469 [Arthroderma benhamiae CBS 112371]
Length = 1181
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 195/375 (52%), Gaps = 72/375 (19%)
Query: 16 IDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYEL-----------FMKRAKK 64
IDPLDAFM+D++ S + + +L ++ + ++ F A K
Sbjct: 405 IDPLDAFMSDLKQSTSTPKQSAKPSSSKLQQPEAMFGDENDINMDPVEPEADDFFALANK 464
Query: 65 KKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKP 119
KR K+ + KI+Y+ RKNFYT+ ++ ++ A R +LD +K+R P P
Sbjct: 465 SKRKKDIPTVNHS-KINYEPFRKNFYTEPVDLAGLTEAEVANIRLELDGIKVRGVDVPTP 523
Query: 120 IKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM 179
++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+AFLLPM
Sbjct: 524 VQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQAVPAIMSGRDVIGVAKTGSGKTIAFLLPM 583
Query: 180 LRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------------- 210
RHI +Q P + + P+ L+M PT EL Q
Sbjct: 584 FRHIRDQRP-LENMEGPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQI 642
Query: 211 -QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQN 260
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ N
Sbjct: 643 AELKRGAEIIVCTPGRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGN 702
Query: 261 IRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK---E 305
IRP+RQ VLFS TFP +E LARKT +V I V R D K
Sbjct: 703 IRPNRQTVLFSATFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAKFVRL 762
Query: 306 LELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 763 LELLGNLYSDDENED 777
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 824 KAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 883
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ Y+ D+ KA + S V + ++ + ++F+ KV G + G+G GG L +R +
Sbjct: 884 DQERYSVDISKALKQSGQPVPEPIQKMVNAFLDKVKEGKEKASGSGFGGKGL---ERLDQ 940
Query: 401 RGKQLRKAQAKEYGFG 416
R + K Y G
Sbjct: 941 ERDATRNRERKTYKTG 956
>gi|384245234|gb|EIE18729.1| DEAD-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 647
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 124/260 (47%), Positives = 154/260 (59%), Gaps = 53/260 (20%)
Query: 102 AYRKQL-DLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLD 160
AYRK+L D+K+R K P P+K W Q GL++++L+ K P+ IQA A I+SG D
Sbjct: 8 AYRKELEDIKVRGKDIPTPVKNWNQCGLSSRVLDVLQKGGFARPMPIQAQALPAIMSGRD 67
Query: 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---QVRR--- 214
+ I +TGSGKTLAF+LPMLRHI +QPP+ G D P+ LVMAPT ELV Q +RR
Sbjct: 68 CIGIAKTGSGKTLAFVLPMLRHIKDQPPLAQG-DGPISLVMAPTRELVVQIGKDIRRFSK 126
Query: 215 ---------------------------------GRMIDLLCKNGVKITNLTRVTYLVLDE 241
GRMIDLL +G KITNL RVTYLV+DE
Sbjct: 127 ALALSVVCAYGGSAVAGQIADLKRGAEVVVCTPGRMIDLLATSGGKITNLRRVTYLVMDE 186
Query: 242 ADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCN 289
ADRMFDMGFEPQI RIV NIRPDRQ V+FS TFP VE+LA++ +V N
Sbjct: 187 ADRMFDMGFEPQIMRIVHNIRPDRQTVMFSATFPRAVEVLAKQVLESPIEIQVGGRSVVN 246
Query: 290 LSIANSVRARGLDEKELELV 309
I+ SV R +++ L L+
Sbjct: 247 SDISQSVEIRPEEDRFLRLL 266
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K++VCNL +A V ARGLD KEL LV+N+D PN +E+YVH ++ K A FI+
Sbjct: 322 KSDVCNLLVATGVAARGLDVKELVLVVNYDTPNHHEEYVHRVGRTGRAGNKGTAITFIAP 381
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++ YA DLVKA S V DL+A+ADSF K G Q HG+G+GG
Sbjct: 382 DDEKYAPDLVKALRESGAPVPKDLQALADSFALKRKAGTVQAHGSGYGGSGFKFDNEEEE 441
Query: 401 RGKQLRKAQAKEYGF 415
K LRK AKE G
Sbjct: 442 ERKALRKV-AKEAGM 455
>gi|116207046|ref|XP_001229332.1| hypothetical protein CHGG_02816 [Chaetomium globosum CBS 148.51]
gi|118597490|sp|Q2HAD8.1|PRP5_CHAGB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|88183413|gb|EAQ90881.1| hypothetical protein CHGG_02816 [Chaetomium globosum CBS 148.51]
Length = 1064
Score = 214 bits (545), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 129/332 (38%), Positives = 179/332 (53%), Gaps = 62/332 (18%)
Query: 12 VQIEIDPLDAFMNDMECSFAEHPNNCF------RLGRRLPAEDSHSASDY---------E 56
V ++DPLDAFM D+E + + + G+ E S DY
Sbjct: 302 VDEDVDPLDAFMADLEQTGSAGGIGSVPARQKQKAGKGFEPEAYFSDDDYGYEEDKADPS 361
Query: 57 LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKI 111
+ A KKK+ I SKI+++ Q+RKNF+ + +E+++M+ R +LD +K+
Sbjct: 362 SILAMASKKKKKDIPTIDYSKIELN--QIRKNFWVEPQELSQMTEDDIADLRLELDGIKV 419
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGK 171
K PKP++ W Q GLT IL+ L +E P +IQ A +I+SG D + + +TGSGK
Sbjct: 420 SGKNVPKPVQKWSQCGLTRPILDVVEGLGYEKPTSIQMQALPVIMSGRDVIGVAKTGSGK 479
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------- 210
T+AF+LPMLRHI +Q PV GDD + L+M PT EL Q
Sbjct: 480 TMAFVLPMLRHIKDQDPVT-GDDGAIALIMTPTRELCTQIYSDLLPFAKALKLRAIAAYG 538
Query: 211 ---------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252
+++R GRMIDLL N ++TNL R TYLVLDEADRMFDMGFEP
Sbjct: 539 GNAIKDQIAELKRGAEIIVATPGRMIDLLAANSGRVTNLKRATYLVLDEADRMFDMGFEP 598
Query: 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
Q+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 599 QVMKIFNNVRPDRQTILFSATMPRIIDALTKK 630
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A FI+E
Sbjct: 726 KKGVCPIMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 785
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR--- 397
E A + KA E S V + L + ++ KV G + +G GG L + +
Sbjct: 786 EQENCAPGIAKALEQSGQPVPEQLNEMRKAWKEKVKTGKAK-DASGFGGKGLERLDKERE 844
Query: 398 --RIRRGKQLRKAQAKEYGFGEDKS 420
R+R ++ KA+ +E F E+++
Sbjct: 845 AARVRE-RKTHKAEGEEDDFKEEET 868
>gi|410516921|sp|Q4IP34.2|PRP5_GIBZE RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
Length = 1207
Score = 214 bits (545), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 197/373 (52%), Gaps = 62/373 (16%)
Query: 2 PETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMK- 60
PE T+ + ++DPLDAFM D++ + P + E S +Y+ K
Sbjct: 445 PEPATQMEVDEEDDVDPLDAFMADLKQTDVRQPTKTSTTQKIQEPEAYFSDDEYDFNKKD 504
Query: 61 ----------RAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQ 106
AK+KK+D I SKI+I + +RKNF+ + E++ ++ A R +
Sbjct: 505 EGDASALLAITAKRKKKDIP-TIDYSKIEI--EPIRKNFWHEPAELSLLTEAEVADLRLE 561
Query: 107 LD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAIT 165
LD +K+ K PKP++ W Q GLT + L+ L +E P IQ A ++SG D + +
Sbjct: 562 LDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVA 621
Query: 166 ETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL------------------ 207
+TGSGKT+AFLLPM RHI +QPP + D P+GL+M PT EL
Sbjct: 622 KTGSGKTVAFLLPMFRHIKDQPP-LKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLR 680
Query: 208 ---------VRQQVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246
+R+Q+ GRMIDLL N ++TNL RVTY+VLDEADRMF
Sbjct: 681 AVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMF 740
Query: 247 DMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKEL 306
DMGFEPQ+ +I N+RPDRQ +LFS T P ++ L +K V I +V R + KE+
Sbjct: 741 DMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKK--VLKNPIEVTVGGRSVVAKEI 798
Query: 307 ELVINF-DAPNDY 318
E ++ D P+ +
Sbjct: 799 EQIVEVRDEPSKF 811
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 874 KKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTP 933
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S + D L + + KV G + +G GG L+ + + R
Sbjct: 934 EQENCAPGIAKALEQSGQPIPDRLNEMRKAHREKVKSGKAK-DTSGFGGKGLDRLDQE-R 991
Query: 401 RGKQLRK 407
+LR+
Sbjct: 992 EAARLRE 998
>gi|46108284|ref|XP_381200.1| hypothetical protein FG01024.1 [Gibberella zeae PH-1]
Length = 1227
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 197/373 (52%), Gaps = 62/373 (16%)
Query: 2 PETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMK- 60
PE T+ + ++DPLDAFM D++ + P + E S +Y+ K
Sbjct: 465 PEPATQMEVDEEDDVDPLDAFMADLKQTDVRQPTKTSTTQKIQEPEAYFSDDEYDFNKKD 524
Query: 61 ----------RAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQ 106
AK+KK+D I SKI+I + +RKNF+ + E++ ++ A R +
Sbjct: 525 EGDASALLAITAKRKKKDIP-TIDYSKIEI--EPIRKNFWHEPAELSLLTEAEVADLRLE 581
Query: 107 LD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAIT 165
LD +K+ K PKP++ W Q GLT + L+ L +E P IQ A ++SG D + +
Sbjct: 582 LDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVA 641
Query: 166 ETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL------------------ 207
+TGSGKT+AFLLPM RHI +QPP + D P+GL+M PT EL
Sbjct: 642 KTGSGKTVAFLLPMFRHIKDQPP-LKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLR 700
Query: 208 ---------VRQQVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246
+R+Q+ GRMIDLL N ++TNL RVTY+VLDEADRMF
Sbjct: 701 AVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMF 760
Query: 247 DMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKEL 306
DMGFEPQ+ +I N+RPDRQ +LFS T P ++ L +K V I +V R + KE+
Sbjct: 761 DMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKK--VLKNPIEVTVGGRSVVAKEI 818
Query: 307 ELVINF-DAPNDY 318
E ++ D P+ +
Sbjct: 819 EQIVEVRDEPSKF 831
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 894 KKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTP 953
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S + D L + + KV G + +G GG L+ + + R
Sbjct: 954 EQENCAPGIAKALEQSGQPIPDRLNEMRKAHREKVKSGKAK-DTSGFGGKGLDRLDQE-R 1011
Query: 401 RGKQLRK 407
+LR+
Sbjct: 1012 EAARLRE 1018
>gi|268573988|ref|XP_002641971.1| Hypothetical protein CBG16678 [Caenorhabditis briggsae]
Length = 972
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 148/250 (59%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
K+ Y++ +KNFY + EI +M+ A YR++LD + ++ PKPIKT+ Q GL K++
Sbjct: 260 KVYYRKFKKNFYIETAEIQKMTKAEVKAYREELDSITVKGIDCPKPIKTFAQCGLNLKMM 319
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
KL++ P +IQA A I+SG D + I +TGSGKTLAFLLPM RHI +QP + G
Sbjct: 320 NVLKKLDYSKPTSIQAQAIPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEG- 378
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
D P+ +++APT EL Q +
Sbjct: 379 DGPIAVILAPTRELAMQTYKEANKFAKVLGLRVACTYGGVGISEQIADLKRGAEIVVCTP 438
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L N K+TNL RVTYLVLDEADRMFD GFEPQI ++V NIRPD+Q VLFS TF
Sbjct: 439 GRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATF 498
Query: 275 PPRVEILARK 284
P +E LARK
Sbjct: 499 PRHMEALARK 508
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFI-S 339
KT V + +A SV ARGLD K L LV+N+D PN YEDYVH ++ K A+ F+
Sbjct: 602 KTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVLP 661
Query: 340 EENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHG 388
E A ++ +AFE + + DLKA+ + F ++ QVH G G
Sbjct: 662 EHQEKMAGEICRAFETAGVKPPADLKAMFERFKKEMEAEGKQVHLGGKG 710
>gi|408391854|gb|EKJ71221.1| hypothetical protein FPSE_08584 [Fusarium pseudograminearum CS3096]
Length = 1192
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 197/373 (52%), Gaps = 62/373 (16%)
Query: 2 PETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMK- 60
PE T+ + ++DPLDAFM D++ + P + E S +Y+ K
Sbjct: 430 PEPATQMEVDEEDDVDPLDAFMADLKQTDVRRPTKTSTTQKIQEPEAYFSDDEYDFNKKD 489
Query: 61 ----------RAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQ 106
AK+KK+D I SKI+I + +RKNF+ + E++ ++ A R +
Sbjct: 490 EGDASALLAITAKRKKKDIP-TIDYSKIEI--EPIRKNFWHEPAELSLLTEAEVADLRLE 546
Query: 107 LD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAIT 165
LD +K+ K PKP++ W Q GLT + L+ L +E P IQ A ++SG D + +
Sbjct: 547 LDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVA 606
Query: 166 ETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL------------------ 207
+TGSGKT+AFLLPM RHI +QPP + D P+GL+M PT EL
Sbjct: 607 KTGSGKTVAFLLPMFRHIKDQPP-LKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLR 665
Query: 208 ---------VRQQVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246
+R+Q+ GRMIDLL N ++TNL RVTY+VLDEADRMF
Sbjct: 666 AVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMF 725
Query: 247 DMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKEL 306
DMGFEPQ+ +I N+RPDRQ +LFS T P ++ L +K V I +V R + KE+
Sbjct: 726 DMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKK--VLKNPIEVTVGGRSVVAKEI 783
Query: 307 ELVINF-DAPNDY 318
E ++ D P+ +
Sbjct: 784 EQIVEVRDEPSKF 796
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 859 KKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTP 918
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S + D L + + KV G + +G GG L+ + + R
Sbjct: 919 EQENCAPGIAKALEQSGQPIPDRLNEMRKAHREKVKSGKAK-DTSGFGGKGLDRLDQE-R 976
Query: 401 RGKQLRK 407
+LR+
Sbjct: 977 EAARLRE 983
>gi|339238901|ref|XP_003381005.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316976022|gb|EFV59375.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 964
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/356 (38%), Positives = 190/356 (53%), Gaps = 75/356 (21%)
Query: 3 ETTTKQLPV--VQIEIDPLDAFMNDMECSFAE----HPNNCFRLGRR------LPAEDSH 50
ET Q PV Q E DPLD FM ++ + P G + L + +
Sbjct: 155 ETNKPQEPVPEEQDEPDPLDVFMQEVHQQIRQTRGIDPTAAGGAGSKGQSKVVLVTKQNA 214
Query: 51 SASDY-----ELFMKRAKKKKRDKNREI-IKSKIKIDYQQLRKNFYTQAREITRMSP--- 101
A +Y ++ +++A + +++ I + K+ Y+ RKNFY + ++ +MS
Sbjct: 215 DALEYSDEEQDVDIEQAISSLAAQAKQLPITNHDKVYYRAFRKNFYVEVADLAKMSQEEV 274
Query: 102 -AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGL 159
AYR+QL+ +++R K PKPIK W QTG + ++++ K N+E P IQA A I+ G
Sbjct: 275 DAYREQLEGIRVRGKNCPKPIKNWAQTGSSRRVMDLLKKYNYEKPTPIQAQAIPAILCGR 334
Query: 160 DSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG------------LVMAPTGEL 207
D + I +TGSGKTLAFL+PM RH+ +QPP + D P+G L+M PT EL
Sbjct: 335 DVIGIAKTGSGKTLAFLIPMFRHVLDQPP-LDDMDGPIGNERPVQYCALVTLIMTPTREL 393
Query: 208 VRQ------------------------------QVRR---------GRMIDLLCKNGVKI 228
Q +++R GRMID+L N K+
Sbjct: 394 AMQIAKECKKFSRPLNLSTVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGKV 453
Query: 229 TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
TNL RVTYLVLDEADRMFDMGFEPQ+ +I+ NIRPDRQ V+FS TFP ++E LARK
Sbjct: 454 TNLRRVTYLVLDEADRMFDMGFEPQVLKIIGNIRPDRQTVMFSATFPRQMEALARK 509
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFR 336
I+ K V L IA SV ARGLD K + LV+N+D PN YEDYVH C ++ K A+
Sbjct: 598 IVDFKNGVITLLIATSVAARGLDVKNMILVVNYDCPNHYEDYVHRVGRCGRAGNKGFAYT 657
Query: 337 FISEE-NAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNL 377
FI + A ++VKAFEL+ V LK + +++ ++ L
Sbjct: 658 FIQPYGQEVSAGNIVKAFELAGQEVPPGLKLMWETYKQQMAL 699
>gi|198470027|ref|XP_001355197.2| GA19457 [Drosophila pseudoobscura pseudoobscura]
gi|198147147|gb|EAL32254.2| GA19457 [Drosophila pseudoobscura pseudoobscura]
Length = 1243
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 150/249 (60%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E++RM+P+ YR +L+ ++++ K PKPIKTW Q G++ K ++
Sbjct: 491 VSYAPFRKNFYVEVPELSRMTPSDVEKYRTELEGVQVKGKGCPKPIKTWAQCGVSKKEMD 550
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 551 VLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPNLDEGDG 610
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
+ + ++MAPT EL Q +RR G
Sbjct: 611 A-IAIIMAPTRELCMQIGKDIRRFSKSLGLRPVCVYGGTGISEQIAELKRGSEIIVCTPG 669
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 670 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 729
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 730 RQMEALARR 738
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 827 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 886
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E + YA D+++A +LS +V +L+ + + + +VH
Sbjct: 887 FITPEQSRYAGDIIRALDLSGCLVPAELQTLWTEYKSAQEAEGKKVH 933
>gi|49072840|gb|AAT51707.1| DEAD box RNA helicase [Choristoneura fumiferana]
Length = 1012
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 150/249 (60%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
++Y RK FYT+ E+ RMSP AYR +L+ ++++ K PKPI+TW G++ K ++
Sbjct: 305 LEYMPFRKAFYTEVSELARMSPEEVEAYRTELEGIRVKGKGCPKPIRTWAHCGVSKKEMD 364
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KLN E P IQA A I+SG D + I +TGSGKTLAF+LPM RH+ +Q P + D
Sbjct: 365 ILKKLNFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQSP-LEDTD 423
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ L+M PT EL Q +++R G
Sbjct: 424 GPISLIMTPTRELCMQIGKDIRKFAKSLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPG 483
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RV+Y+VLDEADRMFDMGFEPQ+ +I+ NIRPDRQ V+FS TFP
Sbjct: 484 RMIDMLAANSGRVTNLRRVSYIVLDEADRMFDMGFEPQVMKIIDNIRPDRQTVMFSATFP 543
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 544 RQMEALARR 552
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K L +A SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 641 IVDFKNGKVKLLVATSVAARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWT 700
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSF 371
F++ E YA D+++A ELS VV L+A+ DS+
Sbjct: 701 FLTPEQGRYAGDVLRAMELSGAVVPPTLRALWDSY 735
>gi|225579817|gb|ACN94094.1| unknown [Drosophila melanogaster]
Length = 1227
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 164/282 (58%), Gaps = 50/282 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+TRM+ A YR L+ ++++ K PKPIKTW Q G++ K +E
Sbjct: 467 VTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEME 526
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 527 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDG 586
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 587 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 645
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 646 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 705
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELE---LVINFDA 314
++E LAR+ + I V R + KE+E +++N DA
Sbjct: 706 RQMEALARR--ILKKPIEVIVGGRSVVCKEVEQHVVILNDDA 745
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 803 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 862
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS ++ +L+A+ + A VH G
Sbjct: 863 FITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFD 922
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 923 EQEFNAAKESKKLQKAALGLA-DSDDEEDIEQ 953
>gi|225579772|gb|ACN94054.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 164/282 (58%), Gaps = 50/282 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+TRM+ A YR L+ ++++ K PKPIKTW Q G++ K +E
Sbjct: 464 VTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEME 523
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 524 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDG 583
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 584 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 642
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 643 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 702
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELE---LVINFDA 314
++E LAR+ + I V R + KE+E +++N DA
Sbjct: 703 RQMEALARR--ILKKPIEVIVGGRSVVCKEVEQHVVILNDDA 742
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 800 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 859
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS ++ +L+A+ + A VH G
Sbjct: 860 FITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFD 919
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 920 EQEFNAAKESKKLQKAALGLA-DSDDEEDIEQ 950
>gi|225579763|gb|ACN94046.1| unknown [Drosophila melanogaster]
gi|225579781|gb|ACN94062.1| unknown [Drosophila melanogaster]
gi|225579826|gb|ACN94102.1| unknown [Drosophila melanogaster]
gi|225579835|gb|ACN94110.1| unknown [Drosophila melanogaster]
gi|225579853|gb|ACN94126.1| unknown [Drosophila melanogaster]
gi|225579862|gb|ACN94134.1| unknown [Drosophila melanogaster]
gi|225579889|gb|ACN94158.1| unknown [Drosophila melanogaster]
gi|225579898|gb|ACN94166.1| unknown [Drosophila melanogaster]
gi|225579916|gb|ACN94182.1| unknown [Drosophila melanogaster]
gi|225579934|gb|ACN94198.1| unknown [Drosophila melanogaster]
gi|225579952|gb|ACN94214.1| unknown [Drosophila melanogaster]
gi|225579961|gb|ACN94222.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 164/282 (58%), Gaps = 50/282 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+TRM+ A YR L+ ++++ K PKPIKTW Q G++ K +E
Sbjct: 464 VTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEME 523
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 524 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDG 583
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 584 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 642
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 643 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 702
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELE---LVINFDA 314
++E LAR+ + I V R + KE+E +++N DA
Sbjct: 703 RQMEALARR--ILKKPIEVIVGGRSVVCKEVEQHVVILNDDA 742
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 800 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 859
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS ++ +L+A+ + A VH G
Sbjct: 860 FITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFD 919
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 920 EQEFNAAKESKKLQKAALGLA-DSDDEEDIEQ 950
>gi|225579844|gb|ACN94118.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 164/282 (58%), Gaps = 50/282 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+TRM+ A YR L+ ++++ K PKPIKTW Q G++ K +E
Sbjct: 464 VTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEME 523
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 524 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDG 583
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 584 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 642
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 643 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 702
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELE---LVINFDA 314
++E LAR+ + I V R + KE+E +++N DA
Sbjct: 703 RQMEALARR--ILKKPIEVIVGGRSVVCKEVEQHVVILNDDA 742
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 800 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 859
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS ++ +L+A+ + A VH G
Sbjct: 860 FITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFD 919
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 920 EQEFNAAKESKKLQKAALGLA-DSDDEEDIEQ 950
>gi|24642151|ref|NP_573020.2| CG6227 [Drosophila melanogaster]
gi|7293060|gb|AAF48446.1| CG6227 [Drosophila melanogaster]
gi|54650792|gb|AAV36975.1| LD41277p [Drosophila melanogaster]
gi|220951960|gb|ACL88523.1| CG6227-PA [synthetic construct]
gi|225579871|gb|ACN94142.1| unknown [Drosophila melanogaster]
gi|225579880|gb|ACN94150.1| unknown [Drosophila melanogaster]
gi|225579907|gb|ACN94174.1| unknown [Drosophila melanogaster]
gi|225579925|gb|ACN94190.1| unknown [Drosophila melanogaster]
gi|225579943|gb|ACN94206.1| unknown [Drosophila melanogaster]
gi|225579970|gb|ACN94230.1| unknown [Drosophila melanogaster]
Length = 1224
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 164/282 (58%), Gaps = 50/282 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+TRM+ A YR L+ ++++ K PKPIKTW Q G++ K +E
Sbjct: 464 VTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEME 523
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 524 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDG 583
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 584 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 642
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 643 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 702
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELE---LVINFDA 314
++E LAR+ + I V R + KE+E +++N DA
Sbjct: 703 RQMEALARR--ILKKPIEVIVGGRSVVCKEVEQHVVILNDDA 742
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 800 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 859
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS ++ +L+A+ + A VH G
Sbjct: 860 FITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFD 919
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 920 EQEFNAAKESKKLQKAALGLA-DSDDEEDIEQ 950
>gi|327278500|ref|XP_003224000.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Anolis
carolinensis]
Length = 1030
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/298 (40%), Positives = 174/298 (58%), Gaps = 49/298 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMS----PAY 103
+S+ + E+ ++ A + K+R++++ KI+Y+ RKNFY + E+ +M+ +Y
Sbjct: 292 YSSEEEEVDLQTALTGYQTKHRKLLEPVDHGKIEYETYRKNFYVEVPELAKMTQEEVTSY 351
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIKTW Q G++ KIL + K +E P IQA A I++G D +
Sbjct: 352 RLEMEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMNGRDLI 411
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q P+ G + P+ ++M PT EL Q
Sbjct: 412 GIAKTGSGKTIAFLLPMFRHIMDQRPLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 470
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 471 GVRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEAD 530
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+ + N I V R +
Sbjct: 531 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR--ILNKPIEVQVGGRSV 586
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ VC L +A SV ARGLD K L LVIN+ PN YEDYVH ++ K A+ FI+E
Sbjct: 664 KSGVCKLLVATSVAARGLDVKHLMLVINYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 723
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V +L+ + + F
Sbjct: 724 DQARYAGDIIKALELSGTPVPSELEKLWNDF 754
>gi|225579808|gb|ACN94086.1| unknown [Drosophila melanogaster]
Length = 1198
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 164/282 (58%), Gaps = 50/282 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+TRM+ A YR L+ ++++ K PKPIKTW Q G++ K +E
Sbjct: 464 VTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEME 523
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 524 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDG 583
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 584 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 642
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 643 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 702
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELE---LVINFDA 314
++E LAR+ + I V R + KE+E +++N DA
Sbjct: 703 RQMEALARR--ILKKPIEVIVGGRSVVCKEVEQHVVILNDDA 742
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 800 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 859
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS ++ +L+A+ + A VH G
Sbjct: 860 FITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFD 919
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 920 EQEFNAAKESKKLQKAALGLA-DSDDEEDIEQ 950
>gi|225579799|gb|ACN94078.1| unknown [Drosophila melanogaster]
Length = 1195
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 164/282 (58%), Gaps = 50/282 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+TRM+ A YR L+ ++++ K PKPIKTW Q G++ K +E
Sbjct: 464 VTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEME 523
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 524 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDG 583
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 584 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 642
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 643 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 702
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELE---LVINFDA 314
++E LAR+ + I V R + KE+E +++N DA
Sbjct: 703 RQMEALARR--ILKKPIEVIVGGRSVVCKEVEQHVVILNDDA 742
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 800 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 859
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS ++ +L+A+ + A VH G
Sbjct: 860 FITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFD 919
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 920 EQEFNAAKESKKLQKAALGLA-DSDDEEDIEQ 950
>gi|378729404|gb|EHY55863.1| hypothetical protein HMPREF1120_03978 [Exophiala dermatitidis
NIH/UT8656]
Length = 1216
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/351 (37%), Positives = 179/351 (50%), Gaps = 104/351 (29%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREII 74
++DPLDAFM +++ P D+ S F +++K K R + E +
Sbjct: 453 DVDPLDAFMQELQ-----------------PERDTKS------FGQKSKAKSRQQEPEAL 489
Query: 75 KSKIKID------------------------------------YQQLRKNFYTQAREITR 98
S +D Y+ R+NFY++ E+
Sbjct: 490 FSDDDVDFTAVDDDNPDNILSLASANAKKKKKDIPTVNHAKMQYEPFRRNFYSEPIEMAE 549
Query: 99 MS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASA 153
+ A R +LD +K+R PKP++ W Q GL ++LE +L +E P +IQA A
Sbjct: 550 WTEEDVAALRMELDNIKVRGVNVPKPVQKWAQCGLGVQVLEVIQRLGYEAPTSIQAQAIP 609
Query: 154 LIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--- 210
I+SG D + + +TGSGKT+AFLLPM RHI +Q P+ P D P+GLV++PT EL Q
Sbjct: 610 AIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLDPL-DGPIGLVLSPTRELATQIHK 668
Query: 211 ---------------------------QVRR---------GRMIDLLCKNGVKITNLTRV 234
++R GRMIDLL NG ++TNL RV
Sbjct: 669 ECKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIVVCTPGRMIDLLAANGGRVTNLRRV 728
Query: 235 TYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
TY+VLDEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TFP ++E LARKT
Sbjct: 729 TYVVLDEADRMFDMGFEPQVMKILSNIRPDRQTVLFSATFPRQMEALARKT 779
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 876 KAGVIPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 935
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E YA D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 936 EQDRYAVDIAKALKQSGQPVPEPVQKLVDSFMEKVKAGKEKAAASGFGGKGLERL 990
>gi|398411885|ref|XP_003857276.1| hypothetical protein MYCGRDRAFT_33937 [Zymoseptoria tritici IPO323]
gi|339477161|gb|EGP92252.1| hypothetical protein MYCGRDRAFT_33937 [Zymoseptoria tritici IPO323]
Length = 1145
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/319 (40%), Positives = 182/319 (57%), Gaps = 53/319 (16%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS-HSASDYELFMKRAKK---KKRDKN 70
E+DPL+AFM++++ E P + G+R+ E S D++ + R K
Sbjct: 384 EMDPLEAFMSNLDQ--VEAPRE-IKGGKRVNQEFSLDDGPDFDAVGDDTEDLLLNPRHKR 440
Query: 71 REIIKS-KIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWR 124
+E+ + K++Y+++RK FY ++ EI M+ R +LD + + PKPI W
Sbjct: 441 KEVPNTDHSKVNYEEIRKKFYAESAEIADMTTEDVEKMRAELDNITVHGVDIPKPITKWS 500
Query: 125 QTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIW 184
Q G +++E ++ ENP AIQ+ A ++SG D++ I +TGSGKTLAF+LPM RHI
Sbjct: 501 QCGFPAQVIEVINEQKFENPTAIQSQALPALMSGRDTIGIAKTGSGKTLAFILPMFRHIK 560
Query: 185 EQPPVVPGDDSPVGLVMAPTGELVRQ------------------------------QVRR 214
+Q PV + P+GL+MAPT EL Q +++R
Sbjct: 561 DQRPVA-NLEGPIGLIMAPTRELAVQIHRECKPYLKALGLRGVCAYGGAPIKEQIGELKR 619
Query: 215 ---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDR 265
GRMIDLL N ++TNL RV+Y+VLDEADRMFDMGFEPQIT+++ NIRPDR
Sbjct: 620 GAEVIVCTPGRMIDLLAANSGRVTNLRRVSYVVLDEADRMFDMGFEPQITKMLGNIRPDR 679
Query: 266 QAVLFSPTFPPRVEILARK 284
Q VLFS TFP ++E LARK
Sbjct: 680 QTVLFSATFPKKMESLARK 698
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 88/186 (47%), Gaps = 10/186 (5%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K + + +A SV ARGLD K+L+LVIN+D PN EDYVH ++ A
Sbjct: 790 IIDFKAGIFPIMVATSVAARGLDVKQLKLVINYDCPNHGEDYVHRAGRTGRAGNTGTAVT 849
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMK 396
F++ YA LV+A E S+ V D+L+ +A + KV G H +G GG + +
Sbjct: 850 FVTPAQERYAGFLVRALEDSKQEVPDELREMAKVYKEKVASGEASFHSSGFGGHGV---E 906
Query: 397 RRIRRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKA 456
R R + K Y G++ D EDV + K S D + A + A
Sbjct: 907 RYDAARAAERAREKKIYKTGDEPEDEEDVKDKKSKE----SEVDKLLAKAAGGVKATDMA 962
Query: 457 SASTPS 462
+A P+
Sbjct: 963 AAEEPT 968
>gi|225579790|gb|ACN94070.1| unknown [Drosophila melanogaster]
Length = 1198
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/282 (42%), Positives = 164/282 (58%), Gaps = 50/282 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+TRM+ A YR L+ ++++ K PKPIKTW Q G++ K +E
Sbjct: 464 VTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEME 523
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 524 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDG 583
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 584 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 642
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 643 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 702
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELE---LVINFDA 314
++E LAR+ + I V R + KE+E +++N DA
Sbjct: 703 RQMEALARR--ILKKPIEVIVGGRSVVCKEVEQHVVILNDDA 742
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 800 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 859
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS ++ +L+A+ + A VH G
Sbjct: 860 FITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFD 919
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 920 EQEFNAAKESKKLQKAALGLA-DSDDEEDIEQ 950
>gi|193683325|ref|XP_001948746.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Acyrthosiphon pisum]
Length = 985
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/273 (41%), Positives = 160/273 (58%), Gaps = 47/273 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+I Y RKNFY + EI+RM+ Y+++L+ ++++ K P+PIK W G++ KI+
Sbjct: 266 EISYLPFRKNFYVEVPEISRMTSEEIEKYKEELEGVRVKGKGCPRPIKVWAHCGVSKKIM 325
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ K N+E P IQ A I++G D + I +TGSGKTLAFLLPM RHI +QPP +
Sbjct: 326 DNLKKHNYEKPTPIQTQAIPAIMAGRDLIGIAKTGSGKTLAFLLPMFRHIMDQPP-LEDT 384
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
D P+ +VMAPT EL Q +++R
Sbjct: 385 DGPIAIVMAPTRELCMQTGKEARKFTKSLGLRVVSVYGGTGISEQIAELKRGAEIIVCTP 444
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ R++ N+RPDRQ V+FS TF
Sbjct: 445 GRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRVIDNVRPDRQTVMFSATF 504
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELE 307
P ++E LAR+ + + + R + KE+E
Sbjct: 505 PRQMEALARR--ILQKPVEVQIGGRSVVAKEVE 535
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L +A SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 603 IVDFKSGQIKLLVATSVAARGLDVKDLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYT 662
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
+S + +A DL++A E S + V + L+ + + AK QVH
Sbjct: 663 LVSPDQERFAGDLIRALETSNVPVPESLRTMWLRYQAKQAAEGKQVH 709
>gi|302922639|ref|XP_003053509.1| hypothetical protein NECHADRAFT_74731 [Nectria haematococca mpVI
77-13-4]
gi|256734450|gb|EEU47796.1| hypothetical protein NECHADRAFT_74731 [Nectria haematococca mpVI
77-13-4]
Length = 1201
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/360 (36%), Positives = 193/360 (53%), Gaps = 62/360 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYE-----------LFMKRAK 63
++DPLDAFM D++ + + P + + E S +Y L AK
Sbjct: 484 DVDPLDAFMADLKQTEVKKPAKTSKTQKVQEPEAYFSDDEYNFNKEENGDPNALLAMTAK 543
Query: 64 KKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPK 118
+KK+D I +K++I Q +RKNF+ + E+++++ R +LD +K+ K PK
Sbjct: 544 RKKKDIP-TIDYTKVEI--QPIRKNFWVEPAELSQLTETEVTDLRLELDGIKVNGKDVPK 600
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P++ W Q GLT + L+ L +E P IQ A ++SG D + + +TGSGKT+AFLLP
Sbjct: 601 PVQKWAQCGLTRQTLDVIDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLP 660
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGEL---------------------------VRQQ 211
M RHI +QPP + D P+GL+M PT EL +R+Q
Sbjct: 661 MFRHIKDQPP-LKDTDGPIGLIMTPTRELAVQIHRDCKPFLKMMGLRSVCAYGGAPIREQ 719
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+ GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 720 IAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFA 779
Query: 260 NIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINF-DAPNDY 318
N+RPD+Q +LFS T P ++ L +K V I +V R + KE+E ++ D P+ +
Sbjct: 780 NMRPDKQTILFSATMPRIIDSLTKK--VLKNPIEVTVGGRSVVAKEIEQIVEVRDEPSKF 837
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 869 KKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTP 928
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S V + L + + KV G + +G GG L+ + + R
Sbjct: 929 EQENCAPGIAKALEQSGQPVPERLNEMRKAHREKVKSGKAK-DTSGFGGKGLDRLDQE-R 986
Query: 401 RGKQLRK 407
+LR+
Sbjct: 987 EAARLRE 993
>gi|154315049|ref|XP_001556848.1| hypothetical protein BC1G_04866 [Botryotinia fuckeliana B05.10]
gi|160419161|sp|A6RW79.1|PRP5_BOTFB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
Length = 1151
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 176/329 (53%), Gaps = 60/329 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRL---PAEDSHSASDYELFMKR---------- 61
EIDPLDAFM +M F+ NN + + P E D ++ +K
Sbjct: 430 EIDPLDAFMEEMGDPFSLPKNNATFIKDNIKSQPQEPEPLFGDDDVDLKALDADPDEILA 489
Query: 62 -AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKC 115
A K ++ K+ I +D RKNFYT+ E+ M+ A R +LD +K+ K
Sbjct: 490 IANKARKKKDIPTINYSA-LDLPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKD 548
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP++ W Q GL K L+ +KL +E P +IQ A I+SG D + + +TGSGKT+AF
Sbjct: 549 VPKPVQKWSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAF 608
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +Q P + G D P+GL+M PT EL Q
Sbjct: 609 LLPMFRHIRDQRP-LKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAII 667
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
++R GRMI+LL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +
Sbjct: 668 KDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMK 727
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+ NIRP+RQ +LFS T P ++ LA+KT
Sbjct: 728 VFNNIRPNRQTILFSATMPRIMDALAKKT 756
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+NFDAPN EDYVH ++ A FI+E
Sbjct: 851 KAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 910
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLG 378
E Y+ + KA E S V D L + S+ KV G
Sbjct: 911 EQEQYSVGIAKALEQSGQEVPDRLNEMRKSYKDKVKSG 948
>gi|347841781|emb|CCD56353.1| similar to pre-mRNA-processing ATP-dependent RNA helicase PRP5
[Botryotinia fuckeliana]
Length = 1179
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 176/329 (53%), Gaps = 60/329 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRL---PAEDSHSASDYELFMKR---------- 61
EIDPLDAFM +M F+ NN + + P E D ++ +K
Sbjct: 430 EIDPLDAFMEEMGDPFSLPKNNATFIKDNIKSQPQEPEPLFGDDDVDLKALDADPDEILA 489
Query: 62 -AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKC 115
A K ++ K+ I +D RKNFYT+ E+ M+ A R +LD +K+ K
Sbjct: 490 IANKARKKKDIPTINYSA-LDLPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKD 548
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP++ W Q GL K L+ +KL +E P +IQ A I+SG D + + +TGSGKT+AF
Sbjct: 549 VPKPVQKWSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAF 608
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +Q P + G D P+GL+M PT EL Q
Sbjct: 609 LLPMFRHIRDQRP-LKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAII 667
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
++R GRMI+LL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +
Sbjct: 668 KDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMK 727
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+ NIRP+RQ +LFS T P ++ LA+KT
Sbjct: 728 VFNNIRPNRQTILFSATMPRIMDALAKKT 756
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+NFDAPN EDYVH ++ A FI+E
Sbjct: 851 KAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 910
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
E Y+ + KA E S V D L + S+ KV G + +G GG L
Sbjct: 911 EQEQYSVGIAKALEQSGQEVPDRLNEMRKSYKDKVKSG-AKKESSGFGGKGL 961
>gi|301612896|ref|XP_002935944.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 1049
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 151/250 (60%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KI+Y+ RKNFY + E+ +M+ +YR +L+ + ++ K PKPIK+W Q G++ KIL
Sbjct: 324 KIEYESYRKNFYVEVPELAKMTTEEVNSYRLELEGITVKGKNCPKPIKSWVQCGISMKIL 383
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ K +E P IQA A I+SG D + I +TGSGKT+AFLLPM RHI +Q P+ G
Sbjct: 384 NSLKKHAYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEEG- 442
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ P+ ++M PT EL Q +++R
Sbjct: 443 EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTP 502
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ NIRPDRQ V+FS TF
Sbjct: 503 GRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNIRPDRQTVMFSATF 562
Query: 275 PPRVEILARK 284
P +E LAR+
Sbjct: 563 PRAMEALARR 572
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC L +A SV ARGLD K+L LVIN+ PN YEDYVH ++ K AF FI+E
Sbjct: 665 KNGVCKLLVATSVAARGLDVKQLILVINYACPNHYEDYVHRAGRTGRAGNKGYAFTFITE 724
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V +L+ + + F
Sbjct: 725 DQARYAGDIIKALELSGTAVPAELEQLWNEF 755
>gi|326482407|gb|EGE06417.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
equinum CBS 127.97]
Length = 1182
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/375 (37%), Positives = 195/375 (52%), Gaps = 72/375 (19%)
Query: 16 IDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMK-----------RAKK 64
IDPLDAFM+D++ S + + +L ++ + ++ M A K
Sbjct: 428 IDPLDAFMSDLKQSTSTPKQSVKPSSSKLQQPEAMFGDENDINMDPVEPEADDLFALANK 487
Query: 65 KKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKP 119
KR K+ + KI+Y+ RKNFYT+ ++ ++ A R +LD +K+R P P
Sbjct: 488 SKRKKDIPTVNHS-KINYEPFRKNFYTEPVDLAGLTEAEVTNIRLELDGIKVRGVDVPTP 546
Query: 120 IKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM 179
++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+AFLLPM
Sbjct: 547 VQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQAVPAIMSGRDVIGVAKTGSGKTIAFLLPM 606
Query: 180 LRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------------- 210
RHI +Q P + + P+ L+M PT EL Q
Sbjct: 607 FRHIRDQRP-LENMEGPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQI 665
Query: 211 -QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQN 260
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ N
Sbjct: 666 AELKRGAEIIVCTPGRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGN 725
Query: 261 IRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK---E 305
IRP+RQ VLFS TFP +E LARKT +V I V R D K
Sbjct: 726 IRPNRQTVLFSATFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAKFVRL 785
Query: 306 LELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 786 LELLGNLYSDDENED 800
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 847 KAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 906
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ Y+ D+ KA + S V + ++ + ++F+ KV G + G+G GG L +R +
Sbjct: 907 DQERYSVDISKALKQSGQPVPEPIQKMVNAFLDKVKEGKEKASGSGFGGKGL---ERLDQ 963
Query: 401 RGKQLRKAQAKEYGFG 416
R + K Y G
Sbjct: 964 ERDATRNRERKTYKTG 979
>gi|301612898|ref|XP_002935945.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 1024
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 151/250 (60%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KI+Y+ RKNFY + E+ +M+ +YR +L+ + ++ K PKPIK+W Q G++ KIL
Sbjct: 299 KIEYESYRKNFYVEVPELAKMTTEEVNSYRLELEGITVKGKNCPKPIKSWVQCGISMKIL 358
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ K +E P IQA A I+SG D + I +TGSGKT+AFLLPM RHI +Q P+ G
Sbjct: 359 NSLKKHAYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEEG- 417
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ P+ ++M PT EL Q +++R
Sbjct: 418 EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTP 477
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ NIRPDRQ V+FS TF
Sbjct: 478 GRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNIRPDRQTVMFSATF 537
Query: 275 PPRVEILARK 284
P +E LAR+
Sbjct: 538 PRAMEALARR 547
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC L +A SV ARGLD K+L LVIN+ PN YEDYVH ++ K AF FI+E
Sbjct: 640 KNGVCKLLVATSVAARGLDVKQLILVINYACPNHYEDYVHRAGRTGRAGNKGYAFTFITE 699
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V +L+ + + F
Sbjct: 700 DQARYAGDIIKALELSGTAVPAELEQLWNEF 730
>gi|317030312|ref|XP_001392304.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Aspergillus
niger CBS 513.88]
gi|143359932|sp|A2QQA8.2|PRP5_ASPNC RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
Length = 1180
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 196/378 (51%), Gaps = 74/378 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSH-------SASDYELFMKR 61
EIDPLDAFM+++ S + R + D H D + F+
Sbjct: 424 EIDPLDAFMSELAESAPPKKKVGAKFSRTKEQQPEALFGDEHDIDMTAVGDGDADDFLAI 483
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
A K K+ K+ + K K++Y+ RK FYT+ ++ +MS + R +LD +K+R
Sbjct: 484 ANKAKKKKDIPAVDHK-KVEYETFRKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDV 542
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q GL + L+ KL +E +IQA A I+SG D + + +TGSGKT+AFL
Sbjct: 543 PKPVQKWSQCGLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFL 602
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+PM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 603 IPMFRHIKDQRP-LDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 661
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 662 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 721
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK- 304
+ NIRPDRQ VLFS TFP +E LARKT +V I V R D+K
Sbjct: 722 MANIRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEVRNDDQKF 781
Query: 305 --ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 782 VRLLELLGNLYSSDENED 799
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 846 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 905
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + D+F+ KV G + +G GG L +
Sbjct: 906 DQERYSVDIAKALKQSGQKVPEPVQKLVDAFLEKVKAGKEKASASGFGGKGLERL 960
>gi|134076811|emb|CAK39865.1| unnamed protein product [Aspergillus niger]
Length = 1191
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 196/378 (51%), Gaps = 74/378 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSH-------SASDYELFMKR 61
EIDPLDAFM+++ S + R + D H D + F+
Sbjct: 435 EIDPLDAFMSELAESAPPKKKVGAKFSRTKEQQPEALFGDEHDIDMTAVGDGDADDFLAI 494
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
A K K+ K+ + K K++Y+ RK FYT+ ++ +MS + R +LD +K+R
Sbjct: 495 ANKAKKKKDIPAVDHK-KVEYETFRKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDV 553
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q GL + L+ KL +E +IQA A I+SG D + + +TGSGKT+AFL
Sbjct: 554 PKPVQKWSQCGLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFL 613
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+PM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 614 IPMFRHIKDQRP-LDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 672
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 673 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 732
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK- 304
+ NIRPDRQ VLFS TFP +E LARKT +V I V R D+K
Sbjct: 733 MANIRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEVRNDDQKF 792
Query: 305 --ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 793 VRLLELLGNLYSSDENED 810
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 857 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 916
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + D+F+ KV G + +G GG L +
Sbjct: 917 DQERYSVDIAKALKQSGQKVPEPVQKLVDAFLEKVKAGKEKASASGFGGKGLERL 971
>gi|241618030|ref|XP_002408280.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215502947|gb|EEC12441.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 1025
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/278 (41%), Positives = 157/278 (56%), Gaps = 45/278 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I Y RKNFY + E+ +M+P +R +++ +K+R K PKPI+ W Q G++ K++E
Sbjct: 303 ISYAPFRKNFYIEVPELAKMTPGEVELWRAEMEGIKVRGKGCPKPIRNWAQCGVSKKVME 362
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K E P IQA A ++SG D + I +TGSGKTLAFLLPM RHI +QPP + DD
Sbjct: 363 VLKKHGFEKPTPIQAQAIPAVMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPP-LEDDD 421
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ ++M PT EL Q ++R G
Sbjct: 422 GPIAVIMTPTRELAMQITKDCKKFTKSLSLRVVCVYGGTGISEQIADLKRGAEIIVCTPG 481
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TN R TY+VLDEADRMFDMGFEPQ+ RIV ++RPDRQ V+FS TFP
Sbjct: 482 RMIDMLAANNGRVTNFRRTTYVVLDEADRMFDMGFEPQVMRIVDSVRPDRQTVMFSATFP 541
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVINFD 313
++E LAR+ + + I R+ E E +VI D
Sbjct: 542 RQMEALARRILMKPIEILVGGRSVVCKEVEQHIVIIND 579
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K + IA SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 639 IVDFKAGKVGVLIATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT 698
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAK 374
FI+++ YA DL KA ELS V +DL+ + +++ AK
Sbjct: 699 FITDDQGRYAADLSKALELSGNPVPEDLQRLFNNYKAK 736
>gi|350629482|gb|EHA17855.1| hypothetical protein ASPNIDRAFT_55865 [Aspergillus niger ATCC 1015]
Length = 1198
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 196/378 (51%), Gaps = 74/378 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSH-------SASDYELFMKR 61
EIDPLDAFM+++ S + R + D H D + F+
Sbjct: 442 EIDPLDAFMSELAESAPPKKKVGAKFSRTKEQQPEALFGDEHDIDMTAVGDGDADDFLAI 501
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
A K K+ K+ + K K++Y+ RK FYT+ ++ +MS + R +LD +K+R
Sbjct: 502 ANKAKKKKDIPAVDHK-KVEYETFRKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDV 560
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q GL + L+ KL +E +IQA A I+SG D + + +TGSGKT+AFL
Sbjct: 561 PKPVQKWSQCGLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFL 620
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+PM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 621 IPMFRHIKDQRP-LDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 679
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 680 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 739
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK- 304
+ NIRPDRQ VLFS TFP +E LARKT +V I V R D+K
Sbjct: 740 MANIRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEVRNDDQKF 799
Query: 305 --ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 800 VRLLELLGNLYSSDENED 817
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 864 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 923
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + D+F+ KV G + +G GG L +
Sbjct: 924 DQERYSVDIAKALKQSGQKVPEPVQKLVDAFLEKVKAGKEKASASGFGGKGLERL 978
>gi|358400668|gb|EHK49994.1| hypothetical protein TRIATDRAFT_161675, partial [Trichoderma
atroviride IMI 206040]
Length = 1258
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 136/357 (38%), Positives = 190/357 (53%), Gaps = 67/357 (18%)
Query: 15 EIDPLDAFMNDM-ECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRA----------- 62
EIDPL+AFM+D+ + + P + ++ +++ + D F +A
Sbjct: 505 EIDPLEAFMDDLKQTETTKIPLKKASVTKKKQEPEAYFSEDDYAFEDQADPNADALLTIA 564
Query: 63 -KKKKRDKNREIIKS--KIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREK 114
K+KK+D I S KID Q +RKNF+ + E+ +S A R +LD +K+ K
Sbjct: 565 SKRKKKD-----IPSVDYSKIDLQPIRKNFWVEPAELNTLSEADVTDLRLELDGIKVNGK 619
Query: 115 CAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLA 174
PKP++ W Q GLT + L+ S L E P IQ A ++SG D V + +TGSGKT+A
Sbjct: 620 DVPKPVQKWAQCGLTRQTLDVISSLGFEKPTPIQMQALPSLMSGRDVVGVAKTGSGKTMA 679
Query: 175 FLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------ 210
FLLPM RHI +Q P+ G D P+GL+M PT EL Q
Sbjct: 680 FLLPMFRHIKDQEPLKDG-DGPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGGAP 738
Query: 211 ------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQIT 255
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+
Sbjct: 739 IRDQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVM 798
Query: 256 RIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINF 312
+I N+RPDRQ +LFS T P ++ L +K V I +V R + KE+E ++
Sbjct: 799 KIFANMRPDRQTILFSATMPRLIDSLTKK--VLKSPIEITVGGRSVVAKEIEQIVEI 853
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 923 KKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTP 982
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S+ V + L + S KV G + +G GG L+ + + R
Sbjct: 983 EQENCAPGIAKALEQSDQPVPERLNEMRKSHREKVKSGKAK-DSSGFGGKGLDRLDQE-R 1040
Query: 401 RGKQLRK 407
+LR+
Sbjct: 1041 EAARLRE 1047
>gi|336464722|gb|EGO52962.1| hypothetical protein NEUTE1DRAFT_150386 [Neurospora tetrasperma
FGSC 2508]
Length = 1193
Score = 211 bits (537), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 175/331 (52%), Gaps = 61/331 (18%)
Query: 12 VQIEIDPLDAFMNDMECSFA---EHPNNCFRLGRR--LPAEDSHSASDYEL--------- 57
V E+DPLDAFM +E + + H + ++ +P E S DY
Sbjct: 434 VDDEVDPLDAFMAGLEQTASGEESHSKADTQTEKKGNIPPEAYFSDDDYGYEADGTDPTS 493
Query: 58 FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIR 112
+ A KKK+ I SK+ D +RKNF+ + E++ MS R +LD +K+
Sbjct: 494 ILAMASKKKKKDIPTIDYSKL--DLNPIRKNFWVEPYELSHMSEGELAELRLELDGIKVS 551
Query: 113 EKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKT 172
K PKP++ W Q GLT IL+T L E P IQ A +I+SG D + + +TGSGKT
Sbjct: 552 GKNIPKPVQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKT 611
Query: 173 LAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------- 210
+AF LPMLRH+ +Q PV GDD + L+M PT EL Q
Sbjct: 612 MAFALPMLRHVKDQDPVT-GDDGAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGG 670
Query: 211 --------QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQ 253
+++RG R+IDLL NG ++TNL R TYLVLDEADRMFDMGFEPQ
Sbjct: 671 NAIKDQIAELKRGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEPQ 730
Query: 254 ITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 731 VMKIFNNVRPDRQTILFSATMPRIIDALTKK 761
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + IA S+ ARGLD K+L+LVIN+DAPN EDYVH ++ A FI+E
Sbjct: 857 KKGVCPILIATSIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 916
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A+ + KA E S V D L + ++ KV G + +G GG L + +
Sbjct: 917 EQENCASGIAKALEQSGQPVPDRLNEMRKAWKEKVKAGKAK-DASGFGGKGLEKLDKDRE 975
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIAT 447
+ + K G +D + ++G +K ++ Q +++ I +
Sbjct: 976 AARMRERKTHKAEGEEDDVKEDAPAEDGEKKDKTKVAIQSAVSAIVS 1022
>gi|327292871|ref|XP_003231133.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
rubrum CBS 118892]
gi|326466763|gb|EGD92216.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichophyton
rubrum CBS 118892]
Length = 1180
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 137/375 (36%), Positives = 195/375 (52%), Gaps = 72/375 (19%)
Query: 16 IDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYEL-----------FMKRAKK 64
+DPLDAFM+D++ S + + +L ++ + ++ F A K
Sbjct: 427 VDPLDAFMSDLKQSTSTPKQSVKPSSSKLQQPEAIFGDENDINMDPVEPEADDFFALANK 486
Query: 65 KKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKP 119
KR K+ + KI+Y+ RKNFYT+ ++ ++ A R +LD +K+R P P
Sbjct: 487 SKRKKDIPTVNHS-KINYEPFRKNFYTEPVDLAGLTEAEVANIRLELDGIKVRGVDVPTP 545
Query: 120 IKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM 179
++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+AFLLPM
Sbjct: 546 VQKWSQCGLGVQTLDVIRKLGYERPTSIQSQAVPAIMSGRDVIGVAKTGSGKTIAFLLPM 605
Query: 180 LRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------------- 210
RHI +Q P + + P+ ++M PT EL Q
Sbjct: 606 FRHIRDQRP-LENMEGPISVIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQI 664
Query: 211 -QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQN 260
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ N
Sbjct: 665 AELKRGAEIIVCTPGRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILGN 724
Query: 261 IRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK---E 305
IRP+RQ VLFS TFP +E LARKT +V I V R D K
Sbjct: 725 IRPNRQTVLFSATFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAKFVRL 784
Query: 306 LELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 785 LELLGNLYSDDENED 799
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 846 KAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 905
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ Y+ D+ KA + S V + ++ + ++F+ KV G + G+G GG L +R +
Sbjct: 906 DQERYSVDISKALKQSGQPVPEPIQKMVNAFLDKVKEGKEKASGSGFGGKGL---ERLDQ 962
Query: 401 RGKQLRKAQAKEYGFG 416
R + K Y G
Sbjct: 963 ERDATRNRERKTYKTG 978
>gi|410915182|ref|XP_003971066.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Takifugu
rubripes]
Length = 1040
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 177/313 (56%), Gaps = 52/313 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A R K R++++ KI Y+ RKNFY + E+ +MS AY
Sbjct: 284 YSSEEEEVDLQTALTGFRTKQRKVLEPVDHEKIQYESYRKNFYVEVPELAKMSQEDVNAY 343
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +L+ + ++ K PKPIKTW Q G++ KIL K +E P IQA A ++SG D +
Sbjct: 344 RLELEGIIVKGKGCPKPIKTWVQCGVSMKILSALKKHGYEKPTPIQAQAIPAVMSGRDLI 403
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q P+ + P+ ++M PT EL Q
Sbjct: 404 GIAKTGSGKTIAFLLPMFRHIMDQRPLEE-SEGPISVIMTPTRELALQITKECKKFSKPL 462
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 463 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYMVLDEAD 522
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL-- 301
RMFDMGFEPQ+ RIV ++RPDRQ V+FS TFP +E LAR+ + N I V R +
Sbjct: 523 RMFDMGFEPQVMRIVDSVRPDRQTVMFSATFPRAMEALARR--ILNKPIEVQVGGRSVVC 580
Query: 302 -DEKELELVINFD 313
D ++ LVI D
Sbjct: 581 SDVEQHVLVIEED 593
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K+L LV+N++ PN YEDYVH ++ K A+ FI+E
Sbjct: 656 KNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRTGRAGNKGFAYTFITE 715
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ YA D++KA ELS V +L+ + SF
Sbjct: 716 DQVRYAGDIIKALELSGSSVPPELEQLWVSF 746
>gi|256088555|ref|XP_002580396.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1544
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 163/267 (61%), Gaps = 47/267 (17%)
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCA 116
A+ +K+DK + I SKI +Y RKNFY + E+ +MS AYR L+ +++R +
Sbjct: 788 AQLQKKDKLQPIDHSKI--EYFPFRKNFYVEVPELAKMSKEDVKAYRASLENIRVRGREC 845
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q G+++++L + N + P IQ A +I+SG D + I +TGSGKTLAFL
Sbjct: 846 PKPLRNWVQAGISSRLLACLKRNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFL 905
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+P++RH+ Q P+ PG D P+ L++APT EL Q
Sbjct: 906 VPLMRHLEHQAPLNPG-DGPIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGIS 964
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMID+L NG ++TNL R +Y+VLDEADRMFD+GFEPQ+ RI
Sbjct: 965 EQIAELKRGAEIIVCTPGRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRI 1024
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
++N RPDRQ ++FS TFP ++EILARK
Sbjct: 1025 IENCRPDRQTLMFSATFPRQMEILARK 1051
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYA 346
L IA SV ARGLD +L LVIN+D PN YEDYVH C ++ K A+ F++ + A
Sbjct: 1150 LLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQERSA 1209
Query: 347 TDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGT----GHGGV------ALNLMK 396
D+V+AF+ S ++L + +++ ++ +V+G+ G G + LN K
Sbjct: 1210 GDVVRAFKQSGQKPPEELMNMWNAYKIRMEHEGKKVYGSSGFRGKGFMFDEVEAQLNSEK 1269
Query: 397 RRIRRG 402
RR+++
Sbjct: 1270 RRLQKA 1275
>gi|156389356|ref|XP_001634957.1| predicted protein [Nematostella vectensis]
gi|156222046|gb|EDO42894.1| predicted protein [Nematostella vectensis]
Length = 794
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/265 (44%), Positives = 157/265 (59%), Gaps = 46/265 (17%)
Query: 64 KKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPK 118
K K+ K + + K + YQ RK+FY + E+ +M+P +R L+ + +R K APK
Sbjct: 76 KTKKKKELQPVDHKTVV-YQPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPK 134
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+KTW QTG+ KIL+ K ++E P IQA A +I+SG D + I +TGSGKTLAFL+P
Sbjct: 135 PVKTWAQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIGIAKTGSGKTLAFLIP 194
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------- 210
M RHI +QPP + ++ P+ +VM PT EL Q
Sbjct: 195 MFRHIKDQPP-LEREEGPIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQ 253
Query: 211 --QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+++R GRMID+L N ++TN R TYLVLDEADRMFDMGFEPQ+ RI+
Sbjct: 254 IAELKRGAEIIVCTPGRMIDMLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQVMRIID 313
Query: 260 NIRPDRQAVLFSPTFPPRVEILARK 284
IRPDRQ V+FS TFP ++E LARK
Sbjct: 314 CIRPDRQTVMFSATFPRQMEALARK 338
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V L IA SV ARGLD K L LV+N+D PN YEDYVH ++ K A+ F++
Sbjct: 431 KNGVTKLMIATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRVGRTGRAGNKGTAYTFLTP 490
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFI-AKVNLGLGQVHGTGHGGVALNLMKRRI 399
E +A D++KA E++E V +D++ +A+++I + G V +G G
Sbjct: 491 EQGRFAIDVIKALEMAENPVPEDVRNLANTYIETRKAEGKNIVKNSGFSGKGFKFNDEEK 550
Query: 400 RRGKQLRKAQAKEYGF--GEDKSDSED-----------------------VDEGTRKSGG 434
+ + +K Q G +D++++E+ V E K G
Sbjct: 551 AKVSEAKKIQKWALGLQDSDDEAEAEEKAIDKRLDAVFSKKPHVKKVVPQVGEPAVKREG 610
Query: 435 DISHQDSIAKIATIAAASNSKASAST----PSLISVAQLLPNGGPSIPLPGV 482
+ + ++A ++IAA N K SA T P+ + +Q++ GG L G+
Sbjct: 611 EQQAKFNLA--SSIAAKINQKISAGTNNLDPTQQAASQII-KGGTVTALTGL 659
>gi|195163860|ref|XP_002022767.1| GL14575 [Drosophila persimilis]
gi|194104790|gb|EDW26833.1| GL14575 [Drosophila persimilis]
Length = 1243
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 149/249 (59%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E++RM+ + YR +L+ ++++ K PKPIKTW Q G++ K ++
Sbjct: 491 VSYAPFRKNFYVEVPELSRMTQSDVEKYRTELEGVQVKGKGCPKPIKTWAQCGVSKKEMD 550
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 551 VLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPNLDEGDG 610
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
+ + ++MAPT EL Q +RR G
Sbjct: 611 A-IAIIMAPTRELCMQIGKDIRRFSKSLGLRPVCVYGGTGISEQIAELKRGSEIIVCTPG 669
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 670 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 729
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 730 RQMEALARR 738
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 827 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 886
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E + YA D+++A +LS +V +L+ + + + +VH
Sbjct: 887 FITPEQSRYAGDIIRALDLSGCLVPAELQTLWTEYKSAQEAEGKKVH 933
>gi|242009038|ref|XP_002425300.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212509065|gb|EEB12562.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 1014
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 147/249 (59%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I+Y RKNFY + EI +M+ YR+ L+ ++++ K PKPIK W Q G++ K+LE
Sbjct: 302 INYLPFRKNFYIEVPEIAKMTNEEVEKYREDLEGIRVKGKGCPKPIKEWAQCGVSKKVLE 361
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K E P IQ A I+SG D + I +TGSGKTLAFLLPM RHI +QPP + D
Sbjct: 362 ILKKNGFEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPP-LEETD 420
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ ++M PT EL Q +++R G
Sbjct: 421 GPIAIIMTPTRELCMQIGKDCKKFSKSVSLKVVCVYGGTGISEQIAELKRGADIVVCTPG 480
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 481 RMIDMLAANSGRVTNLLRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 540
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 541 RQMEALARR 549
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 65/107 (60%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 638 IIDFKSGKVKLLIATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGVAYT 697
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E YA ++++A ELS + V + L+ + D + AK+ +VH
Sbjct: 698 FITPEQERYAGEIIRALELSSVAVPESLRNLWDRYKAKLAAEGKKVH 744
>gi|291241720|ref|XP_002740759.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Saccoglossus kowalevskii]
Length = 1091
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/314 (40%), Positives = 172/314 (54%), Gaps = 72/314 (22%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREII 74
++DPLDAFM + R++ +D KKR+K I
Sbjct: 340 DVDPLDAFMQGVNDEV-----------RQINMDDH---------------KKRNKGSIAI 373
Query: 75 KSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLT 129
++ Y R++FY + EI +M+ +YR +L+ +K+R K PKPIK W Q G++
Sbjct: 374 PAQGSA-YPPFRRDFYVEVPEIAKMTEEDVISYRAELENVKVRGKGCPKPIKAWVQCGVS 432
Query: 130 TKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPV 189
K+L+ KL +E P IQA A I+SG + + I +TGSGKTLAFLLPM RHI +Q P
Sbjct: 433 KKVLDVLKKLKYEKPTPIQAQAIPAIMSGRNLIGIAKTGSGKTLAFLLPMFRHIMDQDP- 491
Query: 190 VPGDDSPVGLVMAPTGELVRQ------------------------------QVRR----- 214
+ DD P+ ++M+PT EL Q +++R
Sbjct: 492 LEADDGPLAVIMSPTRELAMQIYKECKRFCRALNVRGVCVYGGTGISEQIAELKRGAEII 551
Query: 215 ----GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLF 270
GRMID+L N ++TNL R TY+VLDEADRMFDMGFEPQ+ RIV NIRPDRQ V+F
Sbjct: 552 VCTPGRMIDMLTANSGRVTNLRRCTYVVLDEADRMFDMGFEPQVMRIVDNIRPDRQTVMF 611
Query: 271 SPTFPPRVEILARK 284
S TFP ++E LAR+
Sbjct: 612 SATFPRQMEALARR 625
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 89/203 (43%), Gaps = 23/203 (11%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K L IA SV ARGLD K L LV+N+D PN YEDYVH ++ K AF FI+
Sbjct: 718 KAGNIKLLIATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRVGRTGRAGNKGNAFTFITP 777
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNL-GLGQVHGTGHGGVALNLMKRRI 399
E YA D++KAFE+++ +L + F K G + +G G +
Sbjct: 778 EQGRYAGDIIKAFEMADKKAPPELLQLWSEFTEKQKAEGKSIMKSSGFSGKGFKFDETEK 837
Query: 400 RRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAS 459
+ +K Q G + SD ED +G DI Q I + A+ S +
Sbjct: 838 ELANEKKKLQKAALGLQD--SDEED-------AGVDIDQQ-----IENMFASKKSVKDVT 883
Query: 460 TPSLISVAQLLPNGGPSIPLPGV 482
P + A + P P+ GV
Sbjct: 884 VPVGGNPALV-----PGAPIAGV 901
>gi|315042594|ref|XP_003170673.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Arthroderma
gypseum CBS 118893]
gi|311344462|gb|EFR03665.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Arthroderma
gypseum CBS 118893]
Length = 1183
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 195/379 (51%), Gaps = 77/379 (20%)
Query: 15 EIDPLDAFMNDMECSFA--------------EHPNNCFRLGRRLPAEDSHSASDYELFMK 60
++DPLDAFM++++ S + + P F + + +D F
Sbjct: 428 DVDPLDAFMSNLKQSTSTPKQKNIKTSSSKLQQPEAMFGDENDINMDPVEPETDD--FFA 485
Query: 61 RAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKC 115
A K KR K+ + K++Y+ RKNFYT+ ++ ++ A R +LD +K+R
Sbjct: 486 LANKSKRKKDIPTVNHS-KVNYESFRKNFYTEPVDLAGLTEAEVANIRLELDGIKVRGVD 544
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
P P++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+AF
Sbjct: 545 VPTPVQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQAVPAIMSGRDVIGVAKTGSGKTIAF 604
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +Q P + + P+ L+M PT EL Q
Sbjct: 605 LLPMFRHIRDQRP-LENMEGPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPI 663
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +
Sbjct: 664 KDQIAELKRGAEIIVCTPGRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMK 723
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK 304
I+ NIRP+RQ VLFS TFP +E LARKT +V I V R D K
Sbjct: 724 ILGNIRPNRQTVLFSATFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAK 783
Query: 305 ---ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 784 FVRLLELLGNLYSDDENED 802
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 849 KAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 908
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ Y+ D+ KA + S V + ++ + +F+ KV G + G+G GG L +R +
Sbjct: 909 DQERYSVDISKALKQSGQPVPEPVQKMVTAFLDKVKEGKEKASGSGFGGKGL---ERLDQ 965
Query: 401 RGKQLRKAQAKEYGFG 416
R + K Y G
Sbjct: 966 ERDATRNRERKTYKTG 981
>gi|167522064|ref|XP_001745370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776328|gb|EDQ89948.1| predicted protein [Monosiga brevicollis MX1]
Length = 498
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/252 (45%), Positives = 149/252 (59%), Gaps = 46/252 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+I Y RK FYT+ +I RM+ Y+ +++ +K R K P+PIKTW QTGL+ IL
Sbjct: 13 QIQYDSFRKAFYTEVSDIARMTEEEVDQYKAEMENIKTRGKEVPRPIKTWGQTGLSKTIL 72
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+L +ENP IQA A +++SG D + I +TG GKTLAFLLP+LRH+ +Q G+
Sbjct: 73 AILKQLKYENPTPIQAQAIPVVMSGRDMLGIAKTGCGKTLAFLLPLLRHVMDQRKCAQGE 132
Query: 194 DSP--VGLVMAPTGELVRQ---QVRR---------------------------------- 214
SP +GL+M+PT EL Q + R+
Sbjct: 133 ASPGCIGLIMSPTRELALQIYNETRKFCKHLDLRVVCLYGGSDISDQIALLKSAAEIIVC 192
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GRMID+L N ++TNL R TY+ LDEADRMFDMGFEPQ+TRI+ NIRPDRQ V+FS
Sbjct: 193 TPGRMIDMLTVNSGRVTNLRRCTYVALDEADRMFDMGFEPQVTRILDNIRPDRQTVMFSA 252
Query: 273 TFPPRVEILARK 284
TFP +E LARK
Sbjct: 253 TFPRAMEALARK 264
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 283 RKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFIS 339
R NV + +A S+ ARGLD K+L LV+N+D PN YEDYVH C ++ + A+ F++
Sbjct: 357 RAGNV-KIMVATSIAARGLDVKQLCLVVNYDCPNHYEDYVHRCGRTGRAGREGTAYTFLT 415
Query: 340 EENAIYATDLVKAFELSELVVRDDLKAVADSF 371
++ YA ++++A S+ V +DL+ + D +
Sbjct: 416 ADDKKYAGNIIRALHASKAQVPEDLQKLWDQY 447
>gi|326476402|gb|EGE00412.1| Pre-mRNA-processing ATP-dependent RNA helicase prp5 [Trichophyton
tonsurans CBS 112818]
Length = 1182
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 196/377 (51%), Gaps = 76/377 (20%)
Query: 16 IDPLDAFMNDMECSFA-------------EHPNNCFRLGRRLPAEDSHSASDYELFMKRA 62
IDPLDAFM+D++ S + + P F + + +D +LF A
Sbjct: 428 IDPLDAFMSDLKQSTSIPKQSVKPSSSKLQQPEAMFGDENDINMDPVEPEAD-DLFA-LA 485
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAP 117
K KR K+ + KI+Y+ RKNFYT+ ++ ++ A R +LD +K+R P
Sbjct: 486 NKSKRKKDIPPVNHS-KINYEPFRKNFYTEPVDLAGLTEAEVTNIRLELDGIKVRGVDVP 544
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
P++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+AFLL
Sbjct: 545 TPVQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQAVPAIMSGRDVIGVAKTGSGKTIAFLL 604
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------------- 210
PM RHI +Q P + + P+ L+M PT EL Q
Sbjct: 605 PMFRHIRDQRP-LENMEGPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKD 663
Query: 211 ---QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+
Sbjct: 664 QIAELKRGAEIIVCTPGRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIL 723
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK-- 304
NIRP+RQ VLFS TFP +E LARKT +V I V R D K
Sbjct: 724 GNIRPNRQTVLFSATFPRNMEALARKTLSKPIEIIVGGRSVVAPEITQIVEVRNDDAKFV 783
Query: 305 -ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 784 RLLELLGNLYSDDENED 800
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 847 KAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 906
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ Y+ D+ KA + S V + ++ + ++F+ KV G + G+G GG L +R +
Sbjct: 907 DQERYSVDISKALKQSGQPVPEPIQKMVNAFLDKVKEGKEKASGSGFGGKGL---ERLDQ 963
Query: 401 RGKQLRKAQAKEYGFG 416
R + K Y G
Sbjct: 964 ERDATRNRERKTYKTG 979
>gi|427793119|gb|JAA62011.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1147
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 155/275 (56%), Gaps = 45/275 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I Y RKNFY + E+ +M+P R +L+ +K+R K PKPI+ W Q G++ K+LE
Sbjct: 371 ISYAPFRKNFYIEVPELAKMTPGEVETLRAELEGIKVRGKGCPKPIRNWAQCGVSKKVLE 430
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K E P IQA A ++SG D + I +TGSGKTLAFLLPM RHI +QPP + DD
Sbjct: 431 LLKKHGFEKPTPIQAQAIPAVMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPP-LEDDD 489
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ ++M PT EL Q ++R G
Sbjct: 490 GPIAVIMTPTRELAMQITKDCKKFTKSLGLRVVCVYGGTGISEQIADLKRGAEIIVCTPG 549
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TN R TY+VLDEADRMFDMGFEPQ+ RI+ +IRPDRQ V+FS TFP
Sbjct: 550 RMIDMLAANNGRVTNFRRTTYVVLDEADRMFDMGFEPQVMRIIDSIRPDRQTVMFSATFP 609
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
++E LAR+ + + I R+ + E +VI
Sbjct: 610 RQMEALARRILIKPIEILVGGRSVVCKDVEQHVVI 644
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K + IA SV ARGLD K L LV+NFD PN YEDYVH C ++ K A+
Sbjct: 741 IVDFKAGKVGVLIATSVAARGLDVKHLILVVNFDCPNHYEDYVHRCGRTGRAGNKGYAYT 800
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAK 374
FI+E+ Y D++KA ELS + +DL+ + D + A+
Sbjct: 801 FITEDQGRYTADVIKALELSGNPIPEDLQKLFDEYKAR 838
>gi|256088557|ref|XP_002580397.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1500
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 163/267 (61%), Gaps = 47/267 (17%)
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCA 116
A+ +K+DK + I SKI +Y RKNFY + E+ +MS AYR L+ +++R +
Sbjct: 744 AQLQKKDKLQPIDHSKI--EYFPFRKNFYVEVPELAKMSKEDVKAYRASLENIRVRGREC 801
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q G+++++L + N + P IQ A +I+SG D + I +TGSGKTLAFL
Sbjct: 802 PKPLRNWVQAGISSRLLACLKRNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFL 861
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+P++RH+ Q P+ PG D P+ L++APT EL Q
Sbjct: 862 VPLMRHLEHQAPLNPG-DGPIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGIS 920
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMID+L NG ++TNL R +Y+VLDEADRMFD+GFEPQ+ RI
Sbjct: 921 EQIAELKRGAEIIVCTPGRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRI 980
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
++N RPDRQ ++FS TFP ++EILARK
Sbjct: 981 IENCRPDRQTLMFSATFPRQMEILARK 1007
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYA 346
L IA SV ARGLD +L LVIN+D PN YEDYVH C ++ K A+ F++ + A
Sbjct: 1106 LLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQERSA 1165
Query: 347 TDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGT----GHGGV------ALNLMK 396
D+V+AF+ S ++L + +++ ++ +V+G+ G G + LN K
Sbjct: 1166 GDVVRAFKQSGQKPPEELMNMWNAYKIRMEHEGKKVYGSSGFRGKGFMFDEVEAQLNSEK 1225
Query: 397 RRIRRG 402
RR+++
Sbjct: 1226 RRLQKA 1231
>gi|47221754|emb|CAG08808.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1046
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/313 (40%), Positives = 177/313 (56%), Gaps = 52/313 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A R K R++++ KI Y+ RKNFY + E+ +MS AY
Sbjct: 265 YSSEEEEVDLQTALTGFRTKQRKVLEPVDHEKIQYESYRKNFYVEVPELAKMSQEDVNAY 324
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +L+ + ++ K PKPIKTW Q G++ KIL K +E P IQA A ++SG D +
Sbjct: 325 RLELEGIIVKGKGCPKPIKTWVQCGVSMKILSALKKHTYEKPTPIQAQAIPAVMSGRDLI 384
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q P + + P+ ++M PT EL Q
Sbjct: 385 GIAKTGSGKTIAFLLPMFRHIMDQRP-LEESEGPIAVIMTPTRELALQITKECKKFSKPL 443
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 444 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLDEAD 503
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL-- 301
RMFDMGFEPQ+ RIV ++RPDRQ V+FS TFP +E LAR+ + N I V R +
Sbjct: 504 RMFDMGFEPQVMRIVDSVRPDRQTVMFSATFPRAMEALARR--ILNKPIEVQVGGRSVVC 561
Query: 302 -DEKELELVINFD 313
D ++ LVI D
Sbjct: 562 SDVEQHVLVIEED 574
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ C L +A SV ARGLD K+L LV+N++ PN YEDYVH ++ K A+ FI+E
Sbjct: 637 KSGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRTGRAGNKGFAYTFITE 696
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V +L+ + SF
Sbjct: 697 DQARYAGDIIKALELSGSSVPPELEQLWVSF 727
>gi|348527894|ref|XP_003451454.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Oreochromis niloticus]
Length = 1038
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R+I++ KI Y+ RKNFY + E+ +M+ AY
Sbjct: 283 YSSEEEEVDLQTALTGFQTKQRKILEPVDHTKIQYEPYRKNFYVEVPELAKMTTEEVNAY 342
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +L+ + ++ K PKPIKTW Q G++ KIL K +E P IQA A I+SG D +
Sbjct: 343 RLELEGITVKGKGCPKPIKTWVQCGVSMKILNALKKHGYEKPTPIQAQAIPAIMSGRDLI 402
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q P+ + P+ ++M PT EL Q
Sbjct: 403 GIAKTGSGKTIAFLLPMFRHIMDQRPLEES-EGPISVIMTPTRELALQITKECKKFSKPL 461
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 462 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLDEAD 521
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP +E LAR+
Sbjct: 522 RMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRAMEALARR 562
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K+L LV+N++ PN YEDYVH ++ K A+ FI+E
Sbjct: 655 KNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 714
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ YA D++KA ELS V +L+ + SF
Sbjct: 715 DQVRYAGDIIKALELSGSPVPPELEQLWASF 745
>gi|256088559|ref|XP_002580398.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1476
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 163/267 (61%), Gaps = 47/267 (17%)
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCA 116
A+ +K+DK + I SKI +Y RKNFY + E+ +MS AYR L+ +++R +
Sbjct: 720 AQLQKKDKLQPIDHSKI--EYFPFRKNFYVEVPELAKMSKEDVKAYRASLENIRVRGREC 777
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q G+++++L + N + P IQ A +I+SG D + I +TGSGKTLAFL
Sbjct: 778 PKPLRNWVQAGISSRLLACLKRNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFL 837
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+P++RH+ Q P+ PG D P+ L++APT EL Q
Sbjct: 838 VPLMRHLEHQAPLNPG-DGPIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGIS 896
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMID+L NG ++TNL R +Y+VLDEADRMFD+GFEPQ+ RI
Sbjct: 897 EQIAELKRGAEIIVCTPGRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRI 956
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
++N RPDRQ ++FS TFP ++EILARK
Sbjct: 957 IENCRPDRQTLMFSATFPRQMEILARK 983
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 13/126 (10%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYA 346
L IA SV ARGLD +L LVIN+D PN YEDYVH C ++ K A+ F++ + A
Sbjct: 1082 LLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYTFLTPDQERSA 1141
Query: 347 TDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGT----GHGGV------ALNLMK 396
D+V+AF+ S ++L + +++ ++ +V+G+ G G + LN K
Sbjct: 1142 GDVVRAFKQSGQKPPEELMNMWNAYKIRMEHEGKKVYGSSGFRGKGFMFDEVEAQLNSEK 1201
Query: 397 RRIRRG 402
RR+++
Sbjct: 1202 RRLQKA 1207
>gi|427794033|gb|JAA62468.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1111
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 155/275 (56%), Gaps = 45/275 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I Y RKNFY + E+ +M+P R +L+ +K+R K PKPI+ W Q G++ K+LE
Sbjct: 369 ISYAPFRKNFYIEVPELAKMTPGEVETLRAELEGIKVRGKGCPKPIRNWAQCGVSKKVLE 428
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K E P IQA A ++SG D + I +TGSGKTLAFLLPM RHI +QPP + DD
Sbjct: 429 LLKKHGFEKPTPIQAQAIPAVMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPP-LEDDD 487
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ ++M PT EL Q ++R G
Sbjct: 488 GPIAVIMTPTRELAMQITKDCKKFTKSLGLRVVCVYGGTGISEQIADLKRGAEIIVCTPG 547
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TN R TY+VLDEADRMFDMGFEPQ+ RI+ +IRPDRQ V+FS TFP
Sbjct: 548 RMIDMLAANNGRVTNFRRTTYVVLDEADRMFDMGFEPQVMRIIDSIRPDRQTVMFSATFP 607
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
++E LAR+ + + I R+ + E +VI
Sbjct: 608 RQMEALARRILIKPIEILVGGRSVVCKDVEQHVVI 642
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K + IA SV ARGLD K L LV+NFD PN YEDYVH C ++ K A+
Sbjct: 705 IVDFKAGKVGVLIATSVAARGLDVKHLILVVNFDCPNHYEDYVHRCGRTGRAGNKGYAYT 764
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAK 374
FI+E+ Y D++KA ELS + +DL+ + D + A+
Sbjct: 765 FITEDQGRYTADVIKALELSGNPIPEDLQKLFDEYKAR 802
>gi|391335132|ref|XP_003741951.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Metaseiulus occidentalis]
Length = 1171
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 162/275 (58%), Gaps = 47/275 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I +Q RK+FY + E+ +M+PA R +++ + ++ K PKPIKTW Q G++ ++L+
Sbjct: 462 ITFQPFRKDFYIEVPELAQMTPAEVEALRAEMEGITVKGKNVPKPIKTWPQAGISKRVLD 521
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KLN E P IQ A I++G D +AI +TGSGKT+AFLLPM RHI +QPP + D
Sbjct: 522 VLKKLNFEKPTPIQCQALPAIMTGRDLIAIAKTGSGKTIAFLLPMFRHIMDQPP-LEATD 580
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+G+V+ PT EL Q +++R G
Sbjct: 581 GPIGVVLTPTRELAMQITKDCRKFAKALGLRVVCVYGGTGISEQIAELKRGAEIIICTPG 640
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TN+ R TY+VLDEADRMFDMGFEPQ+ RI+ ++RPDRQ V+FS TFP
Sbjct: 641 RMIDMLAANSGRVTNMRRCTYVVLDEADRMFDMGFEPQVMRIIDSVRPDRQTVMFSATFP 700
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
++E LAR+ + + I V R + KE+E +
Sbjct: 701 RQMEALARRILIKPIEIL--VGGRSVVCKEVEQYV 733
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K N+ +A SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 798 IVDFKNGKFNVLVATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYT 857
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHG-TGHGG 389
FI+ E Y+ D+++A E SE + +DL+ + +++ K+ ++ G +G G
Sbjct: 858 FITPEQERYSVDILRALEASEATIPEDLQKLYNTYKEKMEAEGKKIKGSSGFSG 911
>gi|358372963|dbj|GAA89564.1| pre-mRNA-processing ATP-dependent RNA helicase Prp5 [Aspergillus
kawachii IFO 4308]
Length = 1178
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/378 (37%), Positives = 196/378 (51%), Gaps = 74/378 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSH-------SASDYELFMKR 61
E+DPLDAFM+++ S + + + D H D + F+
Sbjct: 422 EVDPLDAFMSELAESAPPKKKVGAKFSKTKEQQPEALFGDEHDIDMTAVGDGDADDFLAI 481
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
A K K+ K+ + K K++Y+ RK FYT+ ++ +MS + R +LD +K+R
Sbjct: 482 ANKAKKKKDIPTVDHK-KVEYESFRKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDV 540
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q GL + L+ KL +E +IQA A I+SG D + + +TGSGKT+AFL
Sbjct: 541 PKPVQKWSQCGLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFL 600
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+PM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 601 IPMFRHIKDQRP-LDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 659
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 660 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 719
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK- 304
+ NIRPDRQ VLFS TFP +E LARKT +V I V R D+K
Sbjct: 720 MANIRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEVRNDDQKF 779
Query: 305 --ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 780 VRLLELLGNLYSSDENED 797
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 844 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 903
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + D+F+ KV G + +G GG L +
Sbjct: 904 DQERYSVDIAKALKQSGQKVPEPVQKLVDAFLEKVKAGKEKASASGFGGKGLERL 958
>gi|195356214|ref|XP_002044575.1| GM20179 [Drosophila sechellia]
gi|194132206|gb|EDW53828.1| GM20179 [Drosophila sechellia]
Length = 1214
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 148/249 (59%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+TRM+ YR L+ ++++ K PKPIKTW Q G++ K +E
Sbjct: 455 VTYAPFRKNFYVEVPELTRMTAGDVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEME 514
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 515 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDG 574
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 575 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 633
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 634 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 693
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 694 RQMEALARR 702
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 791 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 850
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS ++ +L+ + + A VH G
Sbjct: 851 FITPEQSRYAGDIIRAMDLSGTLIPAELQTLWMEYKALQEAEGKTVHTGGGFSGKGFKFD 910
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 911 EQEFNAAKESKKLQKAALGLA-DSDDEEDIEQ 941
>gi|440632990|gb|ELR02909.1| hypothetical protein GMDG_01131 [Geomyces destructans 20631-21]
Length = 1194
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 126/328 (38%), Positives = 175/328 (53%), Gaps = 61/328 (18%)
Query: 16 IDPLDAFMNDMECSFAEHPNNCFRLGRR-----------LPAEDSHSA---SDYELFMKR 61
+DPLDAFM +M FA P + E+ + S+ E +
Sbjct: 437 VDPLDAFMEEMGDPFA-APKTTTNFNKNKSKSQHEPEPIFGDEEDQAGTLDSEPEDILAM 495
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCA 116
K ++ K+ +I + K+D RKNFYT+ E+ M+ A R +LD +K+ K
Sbjct: 496 VSKVRKKKDLPVI-NYAKLDLAPFRKNFYTEPAELAGMTEAALADLRLELDGIKVSGKNV 554
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
P P++ W Q GL + L+ +L +E P AIQ A I+SG D + + +TGSGKT+AF+
Sbjct: 555 PIPVQKWSQCGLNIQSLDVIKRLGYERPTAIQMQALPAIMSGRDVIGVAKTGSGKTMAFM 614
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPM RHI +QPP + G D P+GL+M PT EL Q
Sbjct: 615 LPMFRHIRDQPP-LEGSDGPIGLIMTPTRELATQIHKEAKPFLKSMNLRAVCAYGGAPIK 673
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 674 DQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 733
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT 285
NIRP+RQ ++FS T P ++ LA+KT
Sbjct: 734 FANIRPNRQTIMFSATMPRIMDALAKKT 761
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A FI+
Sbjct: 856 KAGVTPIMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITG 915
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+ Y+ + KA E S V D L + +F AKV G Q +G GG L
Sbjct: 916 DQEQYSVGISKALEQSGQPVPDRLNEMRKAFRAKVKTGKSQ-DSSGFGGKGL 966
>gi|340378427|ref|XP_003387729.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Amphimedon queenslandica]
Length = 1111
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 150/250 (60%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KI+Y RK+FY + ++RM+ YR +L+ LK++ K PKP+K W Q GL++K++
Sbjct: 389 KIEYPPFRKDFYKEVPVLSRMTEEEVSMYRIELESLKVKGKDCPKPVKAWSQCGLSSKVM 448
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ K +E P IQA A I+SG D + I +TGSGKTLAFLLP+ RH+ +QP + P +
Sbjct: 449 DVIKKNGYEKPTPIQAQAIPAIMSGKDVIGIAKTGSGKTLAFLLPLFRHVLDQPEIGP-E 507
Query: 194 DSPVGLVMAPTGELVRQ---QVRR------------------------------------ 214
D P+ L+ APT EL Q + R+
Sbjct: 508 DGPISLIFAPTRELAIQIYNECRKFCKPLKLRTVCVYGGSGVSEQIADLKRGAEIVVCTP 567
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L N ++TNL R+TYLVLDEADRMFDMGFEPQ+ +I+ N RPDRQ V+FS TF
Sbjct: 568 GRMIDVLAANSGRVTNLRRLTYLVLDEADRMFDMGFEPQVMKIINNTRPDRQTVMFSATF 627
Query: 275 PPRVEILARK 284
P ++E LARK
Sbjct: 628 PRQMEALARK 637
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYA 346
L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K AF FI+ + + +
Sbjct: 736 LLIATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGRKGFAFTFITPDQSRLS 795
Query: 347 TDLVKAFELSELVVRDDLKAVADSFIAKV 375
+++KA ELS V ++L + F ++
Sbjct: 796 GEILKALELSGAAVPEELAEMWKGFTEQM 824
>gi|427795059|gb|JAA62981.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1123
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/275 (42%), Positives = 155/275 (56%), Gaps = 45/275 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I Y RKNFY + E+ +M+P R +L+ +K+R K PKPI+ W Q G++ K+LE
Sbjct: 347 ISYAPFRKNFYIEVPELAKMTPGEVETLRAELEGIKVRGKGCPKPIRNWAQCGVSKKVLE 406
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K E P IQA A ++SG D + I +TGSGKTLAFLLPM RHI +QPP + DD
Sbjct: 407 LLKKHGFEKPTPIQAQAIPAVMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPP-LEDDD 465
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ ++M PT EL Q ++R G
Sbjct: 466 GPIAVIMTPTRELAMQITKDCKKFTKSLGLRVVCVYGGTGISEQIADLKRGAEIIVCTPG 525
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TN R TY+VLDEADRMFDMGFEPQ+ RI+ +IRPDRQ V+FS TFP
Sbjct: 526 RMIDMLAANNGRVTNFRRTTYVVLDEADRMFDMGFEPQVMRIIDSIRPDRQTVMFSATFP 585
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
++E LAR+ + + I R+ + E +VI
Sbjct: 586 RQMEALARRILIKPIEILVGGRSVVCKDVEQHVVI 620
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K + IA SV ARGLD K L LV+NFD PN YEDYVH C ++ K A+
Sbjct: 717 IVDFKAGKVGVLIATSVAARGLDVKHLILVVNFDCPNHYEDYVHRCGRTGRAGNKGYAYT 776
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAK 374
FI+E+ Y D++KA ELS + +DL+ + D + A+
Sbjct: 777 FITEDQGRYTADVIKALELSGNPIPEDLQKLFDEYKAR 814
>gi|19075356|ref|NP_587856.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces pombe 972h-]
gi|48474674|sp|Q9P7C7.1|PRP11_SCHPO RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp11
gi|7380876|emb|CAB85446.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces pombe]
Length = 1014
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 185/352 (52%), Gaps = 65/352 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE--DSHSASDYELFMKRAKKK------- 65
E+DPLDA+M + + + R G L E D ++ D + + ++
Sbjct: 301 EVDPLDAYMASLVGT-----TDTIRPGL-LNTEVIDPNANDDERMVISETLEEEENLLAL 354
Query: 66 --KRDKNREIIK-SKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAP 117
KR K +++I KI+Y+ +K+FY + E+ +SPA R LD +KIR P
Sbjct: 355 AAKRSKKKDVITVDHSKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCP 414
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
KP+ +W Q GL+ + + + L +E P +IQA A I SG D + + +TGSGKT+AFLL
Sbjct: 415 KPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLL 474
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR----------------------- 214
PM RHI +Q P+ G + P+ ++M PT EL Q R
Sbjct: 475 PMFRHIKDQRPLKTG-EGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKD 533
Query: 215 ----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
GRMID+L N ++TNL R TYLVLDEADRMFD+GFEPQ+ RI+
Sbjct: 534 QIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRII 593
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
NIRPDRQ VLFS TFP +E LARK V + +V R + E+E ++
Sbjct: 594 NNIRPDRQTVLFSATFPRAMEALARK--VLKKPVEITVGGRSVVASEVEQIV 643
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V ++ IA SV ARGLD K L+LV+N+D PN EDYVH ++ A FI+
Sbjct: 715 KAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITP 774
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN-LMKRRI 399
E YA D+ KA ++S+ V +L+ +A F+ KV G + G G GG L+ L + R
Sbjct: 775 EQEKYAVDIAKALKMSKQPVPKELQTLASQFLEKVKAGKEKAAGGGFGGKGLSRLDETRN 834
Query: 400 RRGKQLRKAQAKEYGFGEDKSDSEDVDEGT--------RKSGGDISHQDSIAKIATIAAA 451
K RKA +GED+ D E E KS GD + A + IAA
Sbjct: 835 AERKMQRKA------YGEDEEDVETEAEAKSPLEKITPEKSTGDPTLDRVRAAVGGIAAR 888
Query: 452 SNSKASASTPSLISVAQLLPNGG 474
+ + +A + L ++ G
Sbjct: 889 AFANQTAQSNKLTQPISIIKTDG 911
>gi|360044201|emb|CCD81748.1| unnamed protein product [Schistosoma mansoni]
Length = 1328
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/284 (41%), Positives = 169/284 (59%), Gaps = 49/284 (17%)
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCA 116
A+ +K+DK + I SKI +Y RKNFY + E+ +MS AYR L+ +++R +
Sbjct: 572 AQLQKKDKLQPIDHSKI--EYFPFRKNFYVEVPELAKMSKEDVKAYRASLENIRVRGREC 629
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q G+++++L + N + P IQ A +I+SG D + I +TGSGKTLAFL
Sbjct: 630 PKPLRNWVQAGISSRLLACLKRNNFDKPTPIQCQALPVIMSGRDMIGIAKTGSGKTLAFL 689
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+P++RH+ Q P+ PG D P+ L++APT EL Q
Sbjct: 690 VPLMRHLEHQAPLNPG-DGPIALLLAPTRELALQIFKETKKLCQAADARAVCVYGGTGIS 748
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMID+L NG ++TNL R +Y+VLDEADRMFD+GFEPQ+ RI
Sbjct: 749 EQIAELKRGAEIIVCTPGRMIDMLAANGGRVTNLHRCSYVVLDEADRMFDLGFEPQVMRI 808
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
++N RPDRQ ++FS TFP ++EILARK V L I + R +
Sbjct: 809 IENCRPDRQTLMFSATFPRQMEILARK--VLTLPIEIQIGGRSV 850
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 73/136 (53%), Gaps = 13/136 (9%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFR 336
I+ K L IA SV ARGLD +L LVIN+D PN YEDYVH C ++ K A+
Sbjct: 924 IMDFKRGNIRLLIATSVAARGLDVTDLLLVINYDCPNHYEDYVHRCGRTGRAGRKGFAYT 983
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGT----GHGGV-- 390
F++ + A D+V+AF+ S ++L + +++ ++ +V+G+ G G +
Sbjct: 984 FLTPDQERSAGDVVRAFKQSGQKPPEELMNMWNAYKIRMEHEGKKVYGSSGFRGKGFMFD 1043
Query: 391 ----ALNLMKRRIRRG 402
LN KRR+++
Sbjct: 1044 EVEAQLNSEKRRLQKA 1059
>gi|195130219|ref|XP_002009550.1| GI15175 [Drosophila mojavensis]
gi|193908000|gb|EDW06867.1| GI15175 [Drosophila mojavensis]
Length = 1229
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 149/249 (59%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+ RM+ + YR +L+ ++++ K PKPIKTW Q G++ K ++
Sbjct: 487 VSYAPFRKNFYVEVPELARMTSSEVEKYRSELEGIQVKGKGCPKPIKTWAQCGVSKKEMD 546
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 547 VLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPALEDGDG 606
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 607 A-IAIIMAPTRELCMQIGKDIRKFSRSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 665
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 666 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 725
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 726 RQMEALARR 734
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K CAF
Sbjct: 823 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGNKGCAFT 882
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A ELS V DL+ + + + A VH G
Sbjct: 883 FITPEQSRYAGDVIRALELSGTPVPPDLQTLWNDYKAAQEAEGKTVHTGGGFSGKGFKFD 942
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 943 EQEFNAVKESKKLQKAALGLA-DSDDEEDIEQ 973
>gi|391337071|ref|XP_003742897.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Metaseiulus occidentalis]
Length = 1005
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 150/249 (60%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I ++ RK+FY + E+ +M+ A R +++ + ++ K PKPIKTW Q G++ K+L+
Sbjct: 290 ITFKPFRKDFYIEVPELHQMTAAEVEALRAEMEGITVKGKNVPKPIKTWPQAGVSKKVLD 349
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KLN E P IQ A I+SG D +AI +TGSGKTLAFLLPM RHI +QPP + D
Sbjct: 350 VLKKLNFEKPTPIQCQALPAIMSGRDLIAIAKTGSGKTLAFLLPMFRHIMDQPP-LEATD 408
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+G+VM PT EL Q +++R G
Sbjct: 409 GPIGVVMTPTRELAMQITKDCKKFAKVLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPG 468
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TN+ R TY+VLDEADRMFDMGFEPQ+ RI+ ++RPDRQ V+FS TFP
Sbjct: 469 RMIDMLAANSGRVTNMRRCTYVVLDEADRMFDMGFEPQVMRIIDSVRPDRQTVMFSATFP 528
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 529 RQMEALARR 537
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 68/114 (59%), Gaps = 4/114 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K N+ +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 626 IVDFKNGKFNVLVATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAYT 685
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHG-TGHGG 389
FI+ + YA D++KA E SE + +DL+ + +++ +++ +V G +G G
Sbjct: 686 FITPDQERYAVDILKALEASEAPIPEDLQKLFNTYKERMDAEGKKVKGSSGFSG 739
>gi|390342961|ref|XP_784902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Strongylocentrotus purpuratus]
Length = 954
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 116/261 (44%), Positives = 154/261 (59%), Gaps = 46/261 (17%)
Query: 69 KNREIIK-SKIKIDYQQLRKNFYTQAREITRMSPAY--RKQLDL---KIREKCAPKPIKT 122
K +E+ K KIDY RK+FY + E+ R++P +++ DL K+R K PKP+ +
Sbjct: 434 KKKELAKVDHSKIDYPPYRKDFYVEVPELARLTPEEVDKRRSDLEGVKVRGKGCPKPVDS 493
Query: 123 WRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRH 182
W Q G++ ++L K N+E P IQ A I+SG D + I +TGSGKT+AFLLPM RH
Sbjct: 494 WVQCGVSMRVLTILKKNNYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTMAFLLPMFRH 553
Query: 183 IWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------------QV 212
I +Q P + +D P+ L+M PT EL Q ++
Sbjct: 554 IMDQDP-LEAEDGPITLIMTPTRELAMQIFKECKKFTKSMGLRAVCVYGGTGISEQIAEL 612
Query: 213 RR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRP 263
+R GRMID+L N ++TNL R TYLVLDEADRMFDMGFEPQ+ +IV+NIRP
Sbjct: 613 KRGAEIIVCTPGRMIDMLGANNGRVTNLRRCTYLVLDEADRMFDMGFEPQVMKIVENIRP 672
Query: 264 DRQAVLFSPTFPPRVEILARK 284
DRQ VLFS TFP ++E LARK
Sbjct: 673 DRQTVLFSATFPRQMEALARK 693
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A SV ARGLD K L LVIN+D PN YEDYVH ++ K ++ F+ E A YA D
Sbjct: 793 VATSVAARGLDVKNLVLVINYDCPNHYEDYVHRVGRTGRAGNKGFSYTFLMPEQAKYAGD 852
Query: 349 LVKAFELSELVVRDDL 364
++KAFELS V ++L
Sbjct: 853 VIKAFELSGAKVPEEL 868
>gi|195432312|ref|XP_002064167.1| GK20023 [Drosophila willistoni]
gi|194160252|gb|EDW75153.1| GK20023 [Drosophila willistoni]
Length = 1234
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/282 (42%), Positives = 163/282 (57%), Gaps = 50/282 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E++RM+ + YR L+ ++++ K PKPIKTW Q G++ K ++
Sbjct: 483 VSYAPFRKNFYVEVPELSRMNSSEVDKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMD 542
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 543 VLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPQLEDGDG 602
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
+ + ++MAPT EL Q +RR G
Sbjct: 603 A-IAIIMAPTRELCMQIGKDIRRFSKSLGLCPVCVYGGTGISEQIAELKRGAEIIVCTPG 661
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 662 RMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 721
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELE---LVINFDA 314
++E LAR+ + I V R + K++E +++N DA
Sbjct: 722 RQMEALARR--ILKKPIEVIVGGRSVVCKDVEQHAVILNDDA 761
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 819 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 878
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+V+A +LS V +L + + + + VH G
Sbjct: 879 FITPEQSRYAGDIVRALDLSGTPVPAELTTLWNDYKSAQEAEGKTVHTGGGFSGKGFKFD 938
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE----------GTRKSGGDISHQDSIAKI 445
++ K+ +K Q G D D ED+++ +++ D S + A +
Sbjct: 939 EQEFNAVKESKKLQKAALGLA-DSDDEEDIEQDIDQQIEQIFAAKRTVKDTSAAAAAAAV 997
Query: 446 ATIAAASNSKASASTPSLISVAQLLPNGGPSIP--LPGVLGL 485
AA + + +TP+ I V L P G P GV GL
Sbjct: 998 VAGAANATAVGGPATPAQIMVPTLPPLMGVQAPGQQAGVAGL 1039
>gi|300120116|emb|CBK19670.2| unnamed protein product [Blastocystis hominis]
Length = 607
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/248 (45%), Positives = 149/248 (60%), Gaps = 44/248 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
++Y +RK+FY ++ IT+M+ R Q +KIR + P+P+ TW Q GLT KIL
Sbjct: 1 MNYIPIRKDFYVESPLITKMTDKEIDDIRDQWRMKIRGRNYPRPVFTWAQCGLTEKILHV 60
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+KL + P IQ+ A ++SG + +A+ +TGSGKTLA+LLP+ RHI +QPPVV G D
Sbjct: 61 INKLGYAKPFPIQSQAIPTVMSGREVIAVAKTGSGKTLAYLLPLFRHILDQPPVVEG-DG 119
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
P+GL++AP ELV Q ++R GR
Sbjct: 120 PIGLILAPARELVAQIYNEASKFCKVLGIRITAVYGGTSMTEQINSLKRGSEIIVCTPGR 179
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+LC N ++ L RV+Y+VLDEADRM DMGFEPQIT I+QN RPDRQ V+FS TFP
Sbjct: 180 MIDILCLNQGRLVGLRRVSYVVLDEADRMLDMGFEPQITTILQNARPDRQLVMFSATFPT 239
Query: 277 RVEILARK 284
VE LARK
Sbjct: 240 HVENLARK 247
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K V + IA SV RG+ +L LVIN+D PN EDYVH ++ K A
Sbjct: 336 IVDFKNKVRTILIATSVAGRGIHVNDLVLVINYDCPNHLEDYVHRVGRTGRAGNKGTAIT 395
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLG 378
FI+ + +YA+D+VKA + S V +L+ ++D+F AKV G
Sbjct: 396 FITPQEDMYASDMVKALKQSHTPVPAELQKLSDAFEAKVKAG 437
>gi|321456211|gb|EFX67324.1| hypothetical protein DAPPUDRAFT_302036 [Daphnia pulex]
Length = 797
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/250 (44%), Positives = 148/250 (59%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KI+Y RKNFY + +I RM+ YR++L+ +K++ K P+PIK W Q G++ K +
Sbjct: 85 KINYFPFRKNFYVEVPDIARMTQEEVDEYRQELEGIKVKGKGCPRPIKAWAQCGVSKKEM 144
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
E KL +E P IQ I+SG D + I +TGSGKTLAFLLPM RHI +Q P +
Sbjct: 145 EILKKLAYEKPTPIQTQTIPAIMSGRDIIGIAKTGSGKTLAFLLPMFRHILDQ-PALEET 203
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
D P+ ++M+PT EL Q +++R
Sbjct: 204 DGPIAIIMSPTRELCLQIGKECKRFTKSLNLRVVTVYGGTGISEQIAELKRGAEIIVCTP 263
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N RPDRQ V+FS TF
Sbjct: 264 GRMIDMLAANNGRVTNLRRVTYIVLDEADRMFDMGFEPQVMRIIDNTRPDRQTVMFSATF 323
Query: 275 PPRVEILARK 284
P ++E LAR+
Sbjct: 324 PRQMEALARR 333
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 3/95 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K L IA SV ARGLD K L LV+N+D PN +EDY+H C ++ K A+ FI+
Sbjct: 426 KNGKIKLMIATSVAARGLDVKHLILVVNYDCPNHHEDYIHRCGRTGRAGNKGFAYTFITP 485
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKV 375
+ A D++KA E SE V +L+ + D + +K+
Sbjct: 486 DQQRAAGDIIKAMEQSETPVPVELQTLWDQYKSKL 520
>gi|194763447|ref|XP_001963844.1| GF21236 [Drosophila ananassae]
gi|190618769|gb|EDV34293.1| GF21236 [Drosophila ananassae]
Length = 1211
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 150/249 (60%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E++RM+ A YR +L+ ++++ K PKPIKTW Q G++ K ++
Sbjct: 458 VSYAPFRKNFYVEVPELSRMTAAEVEKYRSELEGVQVKGKGCPKPIKTWAQCGVSKKEMD 517
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 518 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSLEDGDG 577
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 578 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGSEIIVCTPG 636
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 637 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 696
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 697 RQMEALARR 705
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K AF
Sbjct: 794 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGQAFT 853
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSF 371
FI+ E + YA D+++A +LS ++ +L+ + +
Sbjct: 854 FITPEQSRYAGDIIRALDLSGTLIPAELQTLWTEY 888
>gi|115491279|ref|XP_001210267.1| hypothetical protein ATEG_00181 [Aspergillus terreus NIH2624]
gi|121743211|sp|Q0D1K3.1|PRP5_ASPTN RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|114197127|gb|EAU38827.1| hypothetical protein ATEG_00181 [Aspergillus terreus NIH2624]
Length = 1181
Score = 208 bits (530), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 169/301 (56%), Gaps = 60/301 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
K++Y+ RK FYT+ ++ +MS + R +LD +K+R PKP++ W Q GL + L
Sbjct: 502 KMEYEPFRKKFYTEPSDLAQMSEGELASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTL 561
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +L +ENP +IQ+ A I+SG D + + +TGSGKT+AFL+PM RHI +Q P +
Sbjct: 562 DVIDRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRP-LENM 620
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ P+GL+M PT EL Q +++R
Sbjct: 621 EGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTP 680
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ N+RPDRQ VLFS TF
Sbjct: 681 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANVRPDRQTVLFSATF 740
Query: 275 PPRVEILARKT------------NVCNLSIANSVRARGLDEK---ELELVINFDAPNDYE 319
P +E LARKT +V I V R D+K LEL+ N + ++ E
Sbjct: 741 PRNMEALARKTLNKPVEIVVGGKSVVAPEITQIVEVRNEDKKFVRLLELLGNLYSSDENE 800
Query: 320 D 320
D
Sbjct: 801 D 801
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 848 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 907
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ ++ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 908 DQERFSVDIAKALKQSGQKVPEPVQQMVDSFLEKVKAGKEKASASGFGGKGLERL 962
>gi|296807861|ref|XP_002844269.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Arthroderma
otae CBS 113480]
gi|238843752|gb|EEQ33414.1| pre-mRNA-processing ATP-dependent RNA helicase prp5 [Arthroderma
otae CBS 113480]
Length = 1183
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 140/376 (37%), Positives = 193/376 (51%), Gaps = 73/376 (19%)
Query: 16 IDPLDAFMNDMECSFAEHPNNCFR---LGRRLPAEDSHSASDYEL---------FMKRAK 63
IDPLDAFM+D++ + + + L + P +D + F+ A
Sbjct: 429 IDPLDAFMSDLKQNTSTPKQKGIKSSNLKHQQPEAIFGDENDINMDPIEPEAEDFLALAS 488
Query: 64 KKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPK 118
K KR K I K++Y+ RK FYT+ ++ +S A R +LD +K+R P
Sbjct: 489 KSKRKKEIPSINHS-KMNYEPFRKAFYTEPVDLAGLSEAEVANIRLELDGIKVRGVDVPT 547
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+AFLLP
Sbjct: 548 PVQKWSQCGLGVQTLDVIRKLGYEGPTSIQSQAVPAIMSGRDVIGVAKTGSGKTIAFLLP 607
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------- 210
M RHI +Q P + + P+ L+M PT EL Q
Sbjct: 608 MFRHIRDQRP-LENMEGPISLIMTPTRELATQIHRECRPFLKALNLRAVCAYGGAPIKDQ 666
Query: 211 --QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+
Sbjct: 667 IAELKRGAEIIVCTPGRMIDLLTANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILG 726
Query: 260 NIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK--- 304
NIRP+RQ VLFS TFP +E LARKT +V I V R D K
Sbjct: 727 NIRPNRQTVLFSATFPRNMEALARKTLSKPVEIIVGGRSVVAPEITQIVEVRNDDAKFVR 786
Query: 305 ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 787 LLELLGNLYSDDENED 802
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 849 KAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 908
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+ Y+ D+ KA + S V + ++ + +F+ KV G + G+G GG L
Sbjct: 909 DQERYSVDISKALKQSGQPVPEPIQKMVTAFLDKVKEGKEKASGSGFGGKGL 960
>gi|195397525|ref|XP_002057379.1| GJ17053 [Drosophila virilis]
gi|194147146|gb|EDW62865.1| GJ17053 [Drosophila virilis]
Length = 1244
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 149/249 (59%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+ RM+ + YR +L+ ++++ K PKPIKTW Q G++ K ++
Sbjct: 491 VSYAPFRKNFYVEVPELARMTNSEVDKYRSELEGVQVKGKGCPKPIKTWAQCGVSKKEMD 550
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 551 VLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSLEDGDG 610
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 611 A-IAIIMAPTRELCMQIGKDIRKFSRSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 669
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 670 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 729
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 730 RQMEALARR 738
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 78/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 827 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGNKGSAYT 886
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS V DL+ + + + A VH G
Sbjct: 887 FITPEQSRYAGDVIRALDLSGTPVPPDLQTLWNDYKAAQEAEGKTVHTGGGFSGKGFKFD 946
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 947 EQEFNAVKESKKLQKAALGLA-DSDDEEDIEQ 977
>gi|396462816|ref|XP_003836019.1| hypothetical protein LEMA_P053600.1 [Leptosphaeria maculans JN3]
gi|312212571|emb|CBX92654.1| hypothetical protein LEMA_P053600.1 [Leptosphaeria maculans JN3]
Length = 1194
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 141/399 (35%), Positives = 205/399 (51%), Gaps = 61/399 (15%)
Query: 15 EIDPLDAFMNDMECS--FAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNRE 72
++DPLDA+M D+ + P P + S A D L ++ A+KKK++
Sbjct: 430 DVDPLDAYMADLNDAQPGPAGPGEPMFNDDLEPEQTSVEAEDL-LALRAARKKKKEVP-- 486
Query: 73 IIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTG 127
I K++Y+ RK+FYT+ EI++M+P R +LD +K++ P+P+ W Q G
Sbjct: 487 -IVDHAKVEYEPFRKDFYTEPAEISQMTPEEVADLRHELDGIKVKPDDVPRPVTKWAQMG 545
Query: 128 LTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQP 187
L ++ F+++ +E P +IQA A + SG D + + +TGSGKTLAF +PM+RHI +Q
Sbjct: 546 LLQATMDVFTRVRYERPTSIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHILDQR 605
Query: 188 PVVPGDDSPVGLVMAPTGELVRQQVRR--------------------------------- 214
P+ G D P+GL++APT EL Q V
Sbjct: 606 PLK-GSDGPIGLILAPTRELSLQIVSELKPFLSASNITIKCAYGGQPISDQIAMIKRGGI 664
Query: 215 -------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQA 267
GR+IDLL N ++ N R+TY+VLDEADRMFDMGFEPQ+ +I+ IRPDRQ
Sbjct: 665 HILCATAGRLIDLLQSNSGRVLNFKRITYVVLDEADRMFDMGFEPQVMKILATIRPDRQT 724
Query: 268 VLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---- 323
+LFS TFP + LARK N + R E+ +I F P YE +
Sbjct: 725 ILFSATFPKSMASLARK--ALNKPAEVIIGGRSKVAPEITQIIEF-VPPSYEKKIAKLLL 781
Query: 324 HCCQSWLKSCAFR-FISEENAIYATDLV-KAFELSELVV 360
H Q + ++ + I E A DL+ K F++S L V
Sbjct: 782 HLGQVFSENENSQVLIFTERQETAEDLLSKLFKVSYLSV 820
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V ++ IA SV ARGLD L LV NFD P EDYVH C ++ K A I +
Sbjct: 840 KQGVLSILIATSVAARGLDVPGLALVFNFDCPTHLEDYVHRCGRTGRAGNKGTAITLIED 899
Query: 341 E-NAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLG 378
+A +VKA + S+ V + L+ +AD+F K G
Sbjct: 900 PGQERFAVHVVKALKESDTEVPEQLQRMADAFHEKAKTG 938
>gi|226290234|gb|EEH45718.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5
[Paracoccidioides brasiliensis Pb18]
Length = 1079
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 131/355 (36%), Positives = 185/355 (52%), Gaps = 75/355 (21%)
Query: 1 MPETTTKQLPVVQIEI-----------DPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS 49
MP+ P V +++ DPLDAFM+ + S P R G +
Sbjct: 320 MPDAAGDTAPPVAMDVEEEEEEEEEEADPLDAFMSGLTES---DPTQNGRSGAKFSKSKQ 376
Query: 50 H-------------SASDYEL--FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAR 94
+A D E F+ K ++ K+ ++ + K++Y+ RK FY +
Sbjct: 377 QPEAIFGDEDDVDMNAIDPEADDFLAITSKARKKKDLPLVNHE-KMNYEPFRKAFYAEPV 435
Query: 95 EITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQA 149
++ ++ A R +LD +K+R PKP++ W Q GL + L+ KLN+ENP +IQ+
Sbjct: 436 DLAGLTEEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQS 495
Query: 150 PASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVR 209
A I+SG D + + +TGSGKT+AFLLPM RHI +Q P + + P+GL+M PT EL
Sbjct: 496 QAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRP-LENMEGPIGLIMTPTRELAT 554
Query: 210 Q------------------------------QVRR---------GRMIDLLCKNGVKITN 230
Q +++R GRMIDLL N ++TN
Sbjct: 555 QIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTN 614
Query: 231 LTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
L RVTY+VLDEADRMFDMGFEPQ+ +I+ N+RP RQ VLFS TFP +E LARKT
Sbjct: 615 LRRVTYVVLDEADRMFDMGFEPQVMKILGNVRPQRQTVLFSATFPRNMEALARKT 669
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 3/123 (2%)
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KS 332
PR V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++
Sbjct: 737 PRPYAQGLPAGVFPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTG 796
Query: 333 CAFRFISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
A F++E Y+ D+ KA + S V + ++ + +SFI KV G + G+G GG L
Sbjct: 797 TAVTFLTEVQERYSVDISKALKQSGQPVPEAVQKMVNSFIEKVKAGKEKASGSGFGGKGL 856
Query: 393 NLM 395
+
Sbjct: 857 ERL 859
>gi|85118552|ref|XP_965469.1| hypothetical protein NCU02696 [Neurospora crassa OR74A]
gi|74662807|sp|Q7SH33.1|PRP5_NEUCR RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp-5
gi|28927278|gb|EAA36233.1| hypothetical protein NCU02696 [Neurospora crassa OR74A]
gi|38567223|emb|CAE76515.1| related to RNA helicase [Neurospora crassa]
Length = 1194
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 172/332 (51%), Gaps = 62/332 (18%)
Query: 12 VQIEIDPLDAFMNDME--CSFAEHPNNCFRLGRR----LPAEDSHSASDYEL-------- 57
V E+DPLDAFM +E S E + L + +P E S DY
Sbjct: 434 VDDEVDPLDAFMAGLEQTASGEESHSKADTLTEKKNGNIPPEAYFSDDDYGYEADGTDPT 493
Query: 58 -FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQL-----DLKI 111
+ A KKK+ I SK+ D +RKNF+ + E++ MS +L +K+
Sbjct: 494 SILAMASKKKKKDIPTIDYSKL--DLNPIRKNFWVEPYELSHMSEEELAELRLELDGIKV 551
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGK 171
K PKP++ W Q GLT IL+T L E P IQ A +I+SG D + + +TGSGK
Sbjct: 552 SGKNIPKPVQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGK 611
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------- 210
T+AF LPMLRH+ +Q PV GDD + L+M PT EL Q
Sbjct: 612 TMAFALPMLRHVKDQDPVT-GDDGAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYG 670
Query: 211 ---------QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252
+++RG R+IDLL NG ++TNL R TYLVLDEADRMFDMGFEP
Sbjct: 671 GNAIKDQIAELKRGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEP 730
Query: 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
Q+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 731 QVMKIFNNVRPDRQTILFSATMPRIIDALTKK 762
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + IA S+ ARGLD K+L+LVIN+DAPN EDYVH ++ A FI+E
Sbjct: 858 KKGVCPILIATSIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 917
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A+ + KA E S V D L + ++ KV G + +G GG L + +
Sbjct: 918 EQENCASGIAKALEQSGQPVPDRLNEMRKAWKEKVKAGKAK-DASGFGGKGLEKLDKDRE 976
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIAT 447
+ + K G +D + ++G +K ++ Q +++ I +
Sbjct: 977 AARMRERKTHKAEGEEDDVKEDAPAEDGEKKDKTKVAIQSAVSAIVS 1023
>gi|189188996|ref|XP_001930837.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187972443|gb|EDU39942.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1165
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/320 (38%), Positives = 176/320 (55%), Gaps = 57/320 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAED----SHSASDYELFMKRAKKKKRDKN 70
+IDPLDAFM D+ P+ G + A++ S +D ++ RA KKK+
Sbjct: 413 DIDPLDAFMADLN---EPQPSRNAPSGEAMFADELEPIEMSVADEDINQLRAVKKKK--- 466
Query: 71 REIIK-SKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWR 124
RE+I K++Y+ RKNFYT+ EI++M P R +LD +K+ P+P+ W
Sbjct: 467 REVITVDHEKVEYEPFRKNFYTEPAEISQMKPEEVADLRFELDGIKVNPDNVPRPVTKWA 526
Query: 125 QTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIW 184
Q GL ++ F+++ +E P AIQ+ A + SG D + + +TGSGKTLAF +PM+RHI
Sbjct: 527 QMGLLQATMDVFTQVRYEKPTAIQSQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHIL 586
Query: 185 EQPPVVPGDDSPVGLVMAPTGELVRQQVRR------------------------------ 214
+Q P+ P D P+GL++APT EL Q V
Sbjct: 587 DQRPLKPS-DGPIGLILAPTRELSLQIVHELKPFLAASGITIKCAYGGQPISEQIAMLKR 645
Query: 215 ----------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPD 264
GR+IDL+ N ++ + R+TY+VLDEADRMFDMGFEPQ+ +I+ N+RPD
Sbjct: 646 GGIHILCATAGRLIDLISCNSGRVLSFKRITYVVLDEADRMFDMGFEPQVMKILANVRPD 705
Query: 265 RQAVLFSPTFPPRVEILARK 284
RQ +LFS T P + LA+K
Sbjct: 706 RQTILFSATMPKNMHALAKK 725
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V ++ IA SV ARGLD L +V NFD P EDYVH C ++ K A I
Sbjct: 824 KQGVLSILIATSVAARGLDVPGLAMVFNFDCPTHLEDYVHRCGRTGRAGNKGTAITLIEN 883
Query: 341 E-NAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLG 378
+A + KA + S V ++++ +A++F K G
Sbjct: 884 PGQERFAVHIAKALKESGTEVPEEVQQMANTFHQKCKEG 922
>gi|350296822|gb|EGZ77799.1| Pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Neurospora
tetrasperma FGSC 2509]
Length = 1195
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 172/332 (51%), Gaps = 62/332 (18%)
Query: 12 VQIEIDPLDAFMNDME--CSFAEHPNNCFRLGRR----LPAEDSHSASDYEL-------- 57
V E+DPLDAFM +E S E + L + +P E S DY
Sbjct: 435 VDDEVDPLDAFMAGLEQTASGEESHSKADTLTEKKKGNIPPEAYFSDDDYGYEADGTDPT 494
Query: 58 -FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLD-----LKI 111
+ A KKK+ I SK+ D +RKNF+ + E++ MS +L +K+
Sbjct: 495 SILAMASKKKKKDIPTIDYSKL--DLNPIRKNFWVEPYELSHMSEEELAELRLELDGIKV 552
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGK 171
K PKP++ W Q GLT IL+T L E P IQ A +I+SG D + + +TGSGK
Sbjct: 553 SGKNIPKPVQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGK 612
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------- 210
T+AF LPMLRH+ +Q PV GDD + L+M PT EL Q
Sbjct: 613 TMAFALPMLRHVKDQDPVT-GDDGAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYG 671
Query: 211 ---------QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252
+++RG R+IDLL NG ++TNL R TYLVLDEADRMFDMGFEP
Sbjct: 672 GNAIKDQIAELKRGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEP 731
Query: 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
Q+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 732 QVMKIFNNVRPDRQTILFSATMPRIIDALTKK 763
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + IA S+ ARGLD K+L+LVIN+DAPN EDYVH ++ A FI+E
Sbjct: 859 KKGVCPILIATSIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 918
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A+ + KA E S V D L + ++ KV G + +G GG L + +
Sbjct: 919 EQENCASGIAKALEQSGQPVPDRLNEMRKAWKEKVKAGKAK-DASGFGGKGLEKLDKDRE 977
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIAT 447
+ + K G +D + ++G +K ++ Q +++ I +
Sbjct: 978 AARMRERKTHKAEGEEDDVKEDAPAEDGEKKDKTKVAIQSAVSAIVS 1024
>gi|195060349|ref|XP_001995786.1| GH17577 [Drosophila grimshawi]
gi|193896572|gb|EDV95438.1| GH17577 [Drosophila grimshawi]
Length = 1302
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 147/249 (59%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E+ RM+ + YR L+ ++++ K PKPIKTW Q G++ K ++
Sbjct: 527 VSYAPFRKNFYVEVPELGRMTNSEVDKYRTDLEGVQVKGKGCPKPIKTWAQCGVSKKEMD 586
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 587 VLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPTLEDGDG 646
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
+ + ++MAPT EL Q +RR G
Sbjct: 647 A-IAIIMAPTRELCMQIGKDIRRFSRSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 705
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 706 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 765
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 766 RQMEALARR 774
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 97/186 (52%), Gaps = 6/186 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K CAF
Sbjct: 863 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGNKGCAFT 922
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E A YA D+++AF+LS ++ +L+ + + A VH G
Sbjct: 923 FITPEQARYAGDVIRAFDLSGTLIPPELQTLWTDYKAAQEAEGKTVHTGGGFSGKGFKFD 982
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDI-SHQDSIAKIATIAAASNS 454
++ K+ +K Q G D D ED+++ + I + + ++ +T+A + S
Sbjct: 983 EQEFNAVKESKKLQKAALGLA-DSDDEEDIEQDIDQQIEQIFAAKRTVKDTSTLAGSGQS 1041
Query: 455 KASAST 460
A+++T
Sbjct: 1042 LATSAT 1047
>gi|70995215|ref|XP_752371.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus Af293]
gi|74672743|sp|Q4WT99.1|PRP5_ASPFU RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|66850006|gb|EAL90333.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus Af293]
Length = 1211
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 183/340 (53%), Gaps = 59/340 (17%)
Query: 3 ETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSHSA---- 52
E+ ++ + E+DPLDAFM+++ + R + + D H
Sbjct: 440 ESEKMEVDAAEEEVDPLDAFMSELAETAPPKKTTGARFTKAKDQQPEAMFGDEHDVDLTA 499
Query: 53 ---SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRK 105
D + F+ A K K+ K+ + + K++Y+ RK FYT+ + M+ + R
Sbjct: 500 VGEGDADDFLAIANKAKKKKDIPTVDHE-KMEYEPFRKKFYTEPSNLAEMTDEEAASLRL 558
Query: 106 QLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAI 164
+LD +K+R PKP+ W Q GL + L+ KL +ENP +IQ+ A I+SG D + +
Sbjct: 559 ELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIQKLGYENPTSIQSQAIPAIMSGRDVIGV 618
Query: 165 TETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------- 210
+TGSGKT+AFL+PM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 619 AKTGSGKTIAFLIPMFRHIRDQRP-LENMEGPIGLIMTPTRELATQIHKDCKPFLKALNL 677
Query: 211 ----------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRM 245
+++R GRMIDLL N ++TNL RVTY+VLDEADRM
Sbjct: 678 RAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRM 737
Query: 246 FDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
FDMGFEPQ+ +I+ NIRPDRQ VLFS TFP +E LARK+
Sbjct: 738 FDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKS 777
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 874 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 933
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 934 EQERYSVDIAKALRQSGQKVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERL 988
>gi|432895747|ref|XP_004076142.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Oryzias
latipes]
Length = 1043
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 117/281 (41%), Positives = 163/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R+I++ KI Y+ RKNFY + E+ +M+ AY
Sbjct: 289 YSSEEEEVDLQTALTGFQTKQRKILEPVDHAKIQYEPYRKNFYVEVPELAKMTTEEVNAY 348
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +L+ + ++ K PKPIKTW Q G++ KIL K ++ P IQA A I+SG D +
Sbjct: 349 RLELEGIMVKGKGCPKPIKTWVQCGVSMKILSALKKQGYDKPTPIQAQAIPAIMSGRDLI 408
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q P+ + P+ ++M PT EL Q
Sbjct: 409 GIAKTGSGKTIAFLLPMFRHIMDQRPLEES-EGPISVIMTPTRELALQITKECKKFSKAL 467
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL R TY+VLDEAD
Sbjct: 468 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRATYVVLDEAD 527
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 528 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 568
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC L +A SV ARGLD K+L LV+N++ PN YEDYVH ++ K A+ FI+E
Sbjct: 661 KNGVCRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 720
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ YA D++K ELS V +L+ + SF
Sbjct: 721 DQVRYAGDIIKGLELSGAPVPPELEQLWASF 751
>gi|159131126|gb|EDP56239.1| DEAD/DEAH box RNA helicase [Aspergillus fumigatus A1163]
Length = 1211
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 183/340 (53%), Gaps = 59/340 (17%)
Query: 3 ETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSHSA---- 52
E+ ++ + E+DPLDAFM+++ + R + + D H
Sbjct: 440 ESEKMEVDAAEEEVDPLDAFMSELAETAPPKKTTGARFTKAKDQQPEAMFGDEHDVDLTA 499
Query: 53 ---SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRK 105
D + F+ A K K+ K+ + + K++Y+ RK FYT+ + M+ + R
Sbjct: 500 VGEGDADDFLAIANKAKKKKDIPTVDHE-KMEYEPFRKKFYTEPSNLAEMTDEEAASLRL 558
Query: 106 QLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAI 164
+LD +K+R PKP+ W Q GL + L+ KL +ENP +IQ+ A I+SG D + +
Sbjct: 559 ELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIQKLGYENPTSIQSQAIPAIMSGRDVIGV 618
Query: 165 TETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------- 210
+TGSGKT+AFL+PM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 619 AKTGSGKTIAFLIPMFRHIRDQRP-LENMEGPIGLIMTPTRELATQIHKDCKPFLKALNL 677
Query: 211 ----------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRM 245
+++R GRMIDLL N ++TNL RVTY+VLDEADRM
Sbjct: 678 RAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRM 737
Query: 246 FDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
FDMGFEPQ+ +I+ NIRPDRQ VLFS TFP +E LARK+
Sbjct: 738 FDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKS 777
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 874 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 933
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 934 EQERYSVDIAKALRQSGQKVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERL 988
>gi|330934418|ref|XP_003304540.1| hypothetical protein PTT_17169 [Pyrenophora teres f. teres 0-1]
gi|311318781|gb|EFQ87363.1| hypothetical protein PTT_17169 [Pyrenophora teres f. teres 0-1]
Length = 1166
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 123/321 (38%), Positives = 178/321 (55%), Gaps = 59/321 (18%)
Query: 15 EIDPLDAFMNDMECSFAE-HPNNCFRLGRRLPAED----SHSASDYELFMKRAKKKKRDK 69
+IDPLDAFM D+ AE P + G + A++ S +D ++ RA KKK+
Sbjct: 414 DIDPLDAFMADL----AEPQPTHNAPSGEAMFADELEPIEMSVADEDINQLRAAKKKK-- 467
Query: 70 NREIIK-SKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTW 123
+E+I K++Y+ RKNFYT+ EI++M P R +LD +K+ P+P+ W
Sbjct: 468 -KEVITVDHEKVEYEPFRKNFYTEPAEISQMKPEEVADLRFELDGIKVNPDDVPRPVTKW 526
Query: 124 RQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHI 183
Q GL ++ F+++ +E P AIQ+ A + SG D + + +TGSGKTLAF +PM+RHI
Sbjct: 527 AQMGLLQATMDVFTQVRYEKPTAIQSQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHI 586
Query: 184 WEQPPVVPGDDSPVGLVMAPTGELVRQQVRR----------------------------- 214
+Q P+ P D P+GL++APT EL Q V
Sbjct: 587 LDQRPLKPS-DGPIGLILAPTRELSLQIVHELKPFLAASGITIKCAYGGQPISEQIAMLK 645
Query: 215 -----------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRP 263
GR+IDL+ N ++ + R+TY+VLDEADRMFDMGFEPQ+ +I+ N+RP
Sbjct: 646 RGGIHILCATAGRLIDLISCNSGRVLSFKRITYVVLDEADRMFDMGFEPQVMKILANVRP 705
Query: 264 DRQAVLFSPTFPPRVEILARK 284
DRQ +LFS T P + LA+K
Sbjct: 706 DRQTILFSATMPKNMHALAKK 726
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V ++ IA SV ARGLD L +V NFD P EDYVH C ++ K A I
Sbjct: 825 KQGVLSILIATSVAARGLDVPGLAMVFNFDCPTHLEDYVHRCGRTGRAGNKGTAITLIEN 884
Query: 341 E-NAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLG 378
+A +VKA + S+ V ++L+ +A++F K G
Sbjct: 885 PGQERFAVHIVKALKESDTEVPEELQQMANTFHKKCKEG 923
>gi|432117756|gb|ELK37909.1| Putative ATP-dependent RNA helicase DDX46 [Myotis davidii]
Length = 1191
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 165/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 531 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 590
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQA A I+SG D +
Sbjct: 591 RLEMEGIIVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMSGRDLI 650
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 651 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 709
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 710 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 769
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 770 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 810
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 903 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 962
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 963 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 993
>gi|367042554|ref|XP_003651657.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
gi|346998919|gb|AEO65321.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
Length = 1193
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 127/343 (37%), Positives = 176/343 (51%), Gaps = 77/343 (22%)
Query: 10 PVVQIE---IDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKK 66
P IE +DPLDAFM D+E H +G + P ++ +E A +
Sbjct: 428 PTADIEEEDVDPLDAFMADLE-----HTGTAGGVGSKPPKPSQNAKKGFE---PEAYFSE 479
Query: 67 RDKNREIIKSK---------------------IKIDYQQLRKNFYTQAREITRMSPA--- 102
D E + KI+ +RKNF+ + +E+++M+
Sbjct: 480 DDYGFEADNADPASILAMAAKKKKKDIPTVDYSKIELNPIRKNFWVEPQELSQMTEEEAA 539
Query: 103 -YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLD 160
R +LD +K+ K P+P++ W Q GLT IL+T L +E P IQ A +I+SG D
Sbjct: 540 DLRLELDGIKVSGKNVPRPVQKWSQCGLTRPILDTIEGLGYEKPTPIQMQALPVIMSGRD 599
Query: 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------- 210
+ + +TGSGKT+AF+LPMLRHI +Q PV GDD P+GL+M PT EL Q
Sbjct: 600 VIGVAKTGSGKTMAFVLPMLRHIKDQDPVS-GDDGPIGLIMTPTRELCTQIYSDLLPFTK 658
Query: 211 --------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDE 241
+++R GRMIDLL N ++TNL R TY+VLDE
Sbjct: 659 ALKLRAVAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAANSGRVTNLKRATYIVLDE 718
Query: 242 ADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
ADRMFDMGFEPQ+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 719 ADRMFDMGFEPQVMKIFNNVRPDRQTILFSATMPRIIDALTKK 761
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 76/145 (52%), Gaps = 10/145 (6%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + IA SV ARGLD K+L LV+N+DAPN EDYVH ++ A FI+E
Sbjct: 857 KKGVCPILIATSVAARGLDVKQLTLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 916
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR--- 397
E A + KA E S V + L + ++ KV G + +G GG L + +
Sbjct: 917 EQENCAVGIAKALEQSGQPVPERLNEMRKAWREKVKAGKAK-DASGFGGKGLEKLDKDRE 975
Query: 398 --RIRRGKQLRKAQAKEYGFGEDKS 420
R+R ++ KA+ +E F E+++
Sbjct: 976 AARMRE-RKTHKAEGEEDDFKEEET 999
>gi|429848197|gb|ELA23711.1| pre-mRNA-processing atp-dependent rna helicase prp5 [Colletotrichum
gloeosporioides Nara gc5]
Length = 1165
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 121/323 (37%), Positives = 174/323 (53%), Gaps = 55/323 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKK---------K 65
E+DPLDAFM D++ +++ +++ + D F K K
Sbjct: 448 EVDPLDAFMADLDTKPKPAAPKASTSSKKVQEPEAYFSDDDYAFKAEDKDANAILAMAAK 507
Query: 66 KRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPI 120
++ K+ I K+D Q +RKNF+ + E+ ++ A R +LD +K+ K P+P+
Sbjct: 508 RKKKDIPTIDYS-KLDLQPIRKNFWVEPAELAALTEAEANDLRLELDGIKVSGKDVPRPV 566
Query: 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPML 180
+ W Q GLT + L+ + L +E P +IQ A +I+SG D V + +TGSGKT+AFLLPM
Sbjct: 567 QKWAQCGLTRQTLDVVADLGYEKPTSIQMQALPVIMSGRDVVGVAKTGSGKTVAFLLPMF 626
Query: 181 RHIWEQPPVVPGDDSPVGLVMAPTGEL---------------------------VRQQVR 213
RHI +QPP + D P+GL+M PT EL +R Q+
Sbjct: 627 RHIMDQPP-IKDTDGPIGLIMTPTRELAVQIHRDCKPFLKAMGLRAVCAYGGAPIRDQIA 685
Query: 214 R------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI 261
GRMIDLL N ++TNL RV+Y+VLDEADRMFDMGFEPQ+ +I N+
Sbjct: 686 ELKRGAEIVVCTPGRMIDLLAANQGRVTNLRRVSYVVLDEADRMFDMGFEPQVMKIFANM 745
Query: 262 RPDRQAVLFSPTFPPRVEILARK 284
RPDRQ +LFS T P ++ L +K
Sbjct: 746 RPDRQTILFSATMPRIIDSLTKK 768
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 77/148 (52%), Gaps = 10/148 (6%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ K A FI+E
Sbjct: 864 KKGIVPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNKGTAVTFITE 923
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMK---- 396
E A + KA E S + D L + + KV G + +G GG L+ +
Sbjct: 924 EQENCAPGIAKALEQSGQPIPDRLNEMRKAHKDKVKAGKAK-DTSGFGGKGLDRLDAERE 982
Query: 397 -RRIRRGKQLRKAQAKEYGFGEDKSDSE 423
R+R ++ KA+ +E E+K++ +
Sbjct: 983 AARLRE-RKTHKAEGEEDDVKEEKTEED 1009
>gi|348665957|gb|EGZ05785.1| hypothetical protein PHYSODRAFT_533185 [Phytophthora sojae]
Length = 2125
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 111/249 (44%), Positives = 147/249 (59%), Gaps = 44/249 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
K++Y +K FY +EI +S A RK+ ++K+R K P+P++ W Q G + ++L+
Sbjct: 1478 KMNYLAFQKKFYVVPKEIKDLSEEEVEAQRKESEIKVRGKSCPRPLQKWTQCGFSVRMLQ 1537
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K E P AIQ A I+SG D + I +TGSGKTLAFLLPM RHI QPP+ ++
Sbjct: 1538 LIKKHGFEEPFAIQKQALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHILAQPPLQE-NE 1596
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+G++MAP EL +Q + R+ G
Sbjct: 1597 GPIGIIMAPARELAQQIYMETRKFSKGLGLRATAVYGGSSVSEQIANLKRGSDIVICTPG 1656
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+LC + K+ +L RVTY+VLDEADRMFDMGFEPQIT+I+ NIRPDRQ +LFS TFP
Sbjct: 1657 RMIDILCMSAGKMVSLQRVTYVVLDEADRMFDMGFEPQITKIMMNIRPDRQTLLFSATFP 1716
Query: 276 PRVEILARK 284
VE LARK
Sbjct: 1717 RSVESLARK 1725
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 90/191 (47%), Gaps = 17/191 (8%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + +A SV RGLD K+L LVIN+ PN EDYVH ++ K A+ FIS
Sbjct: 1818 KRKVRTVMVATSVAGRGLDVKDLVLVINYHCPNHMEDYVHRVGRTGRAGRKGTAYTFISP 1877
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ Y+ DLVKA E ++ V +L +A++F KV G + HG+G G +
Sbjct: 1878 DEEEYSVDLVKALENAKQTVPPELTQLAEAFKEKVKRGEARYHGSGFKGKGFTFDETERN 1937
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
++ Q ++Y ++D G + D + + NS A+
Sbjct: 1938 ETQRTADLQKRQY----------ELDNGILVEDNAAADDDDADE----PSKENSVAATDK 1983
Query: 461 PSLISVAQLLP 471
PSL +VA+ LP
Sbjct: 1984 PSLPAVAKQLP 1994
>gi|407926275|gb|EKG19243.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 1029
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/331 (39%), Positives = 177/331 (53%), Gaps = 69/331 (20%)
Query: 15 EIDPLDAFMNDMECSFA--EHPNNCFRLGRRLPA------EDSHSA---SDYELFMKRAK 63
E DPLDAFM+D+ A + P + G++ P ED A SD E + A
Sbjct: 279 EPDPLDAFMSDLNSIAAPKKAPKTMSKTGQKEPVALYSDDEDLREAAAESDPEDVLAMAT 338
Query: 64 KKKRDKNREIIKSKI------KIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIR 112
KKK KS I K++YQ +R NFYT+ +E+ M + R + D + +
Sbjct: 339 KKK-------AKSTIGQVDHSKMNYQDVRFNFYTEPQELAEMDEDAVSSLRFEKDGINVL 391
Query: 113 EKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKT 172
+ PKP+ + Q GL K L+ L P +IQ+ A I+SG D +A+ +TGSGKT
Sbjct: 392 GRNVPKPVSAFAQCGLGLKTLDVLRSLQFSEPTSIQSQAIPTIMSGRDLIAVAKTGSGKT 451
Query: 173 LAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR------------------ 214
LAFLLPM RHI +Q P+ P D P+ ++MAPT EL Q ++
Sbjct: 452 LAFLLPMFRHIMDQDPLKPM-DGPIAVIMAPTRELASQILKEARPFAKSLCLRAVVCGGG 510
Query: 215 ---------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQ 253
GR+I+LL NG ++TNL RVTY+VLDEADRMFD+GF+PQ
Sbjct: 511 APIKDQIAELKKGAEIIIATPGRLIELLGANGGRVTNLARVTYVVLDEADRMFDLGFKPQ 570
Query: 254 ITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
I RI+QNIRP RQ VLFS TFP +E +A++
Sbjct: 571 IARILQNIRPKRQTVLFSATFPAAMEAIAKE 601
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
I SV ARGLD K+L+LVIN+DAP+ EDYVH ++ K A FI + A +
Sbjct: 705 IGTSVAARGLDVKQLKLVINYDAPDHVEDYVHRAGRTGRAGNKGTAITFIRPRQGLVAKE 764
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNL 377
+ KAF + L V ++L+A+AD ++ N+
Sbjct: 765 IAKAFAFANLPVPENLQAIADKVKSRSNM 793
>gi|225682788|gb|EEH21072.1| pre-mRNA-processing ATP-dependent RNA helicase prp5
[Paracoccidioides brasiliensis Pb03]
Length = 1203
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/356 (36%), Positives = 185/356 (51%), Gaps = 76/356 (21%)
Query: 1 MPETTTKQLPVVQIEI------------DPLDAFMNDMECSFAEHPNNCFRLGRRLPAED 48
MP+ P V +++ DPLDAFM+ + S P R G +
Sbjct: 430 MPDAAGDTAPPVAMDVEEEEEEEEEEEADPLDAFMSGLTES---DPTQNGRSGAKFSKSK 486
Query: 49 SH-------------SASDYEL--FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQA 93
+A D E F+ K ++ K+ ++ + K++Y+ RK FY +
Sbjct: 487 QQPEAIFGDEDDVDMNAIDPEADDFLAITSKARKKKDLPLVNHE-KMNYEPFRKAFYAEP 545
Query: 94 REITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQ 148
++ ++ A R +LD +K+R PKP++ W Q GL + L+ KLN+ENP +IQ
Sbjct: 546 VDLAGLTEEEVAALRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIRKLNYENPTSIQ 605
Query: 149 APASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELV 208
+ A I+SG D + + +TGSGKT+AFLLPM RHI +Q P + + P+GL+M PT EL
Sbjct: 606 SQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRP-LENMEGPIGLIMTPTRELA 664
Query: 209 RQ------------------------------QVRR---------GRMIDLLCKNGVKIT 229
Q +++R GRMIDLL N ++T
Sbjct: 665 TQIHKECKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVT 724
Query: 230 NLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
NL RVTY+VLDEADRMFDMGFEPQ+ +I+ N+RP RQ VLFS TFP +E LARKT
Sbjct: 725 NLRRVTYVVLDEADRMFDMGFEPQVMKILGNVRPQRQTVLFSATFPRNMEALARKT 780
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++E
Sbjct: 877 KAGVFPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 936
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
Y+ D+ KA + S V + ++ + +SFI KV G + G+G GG L +
Sbjct: 937 VQERYSVDISKALKQSGQPVPEAVQKMVNSFIEKVKAGKEKASGSGFGGKGLERL 991
>gi|119495979|ref|XP_001264763.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
gi|143359979|sp|A1D373.1|PRP5_NEOFI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|119412925|gb|EAW22866.1| dead box ATP-dependent rna helicase [Neosartorya fischeri NRRL 181]
Length = 1193
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 183/340 (53%), Gaps = 59/340 (17%)
Query: 3 ETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSHSA---- 52
E+ ++ + E+DPLDAFM+++ + R + + D H
Sbjct: 422 ESEKMEVDAAEEEVDPLDAFMSELAETAPPKKTTGARFAKAKEQQPEAMFGDEHDVDLTA 481
Query: 53 ---SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRK 105
D + F+ A K K+ K+ + + K++Y+ RK FYT+ + M+ + R
Sbjct: 482 VGEGDADDFLAIANKAKKKKDIPAVDHE-KMEYEPFRKKFYTEPSNLAEMTDEEAASLRL 540
Query: 106 QLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAI 164
+LD +K+R PKP+ W Q GL + L+ +L +ENP +IQ+ A I+SG D + +
Sbjct: 541 ELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIHRLGYENPTSIQSQAIPAIMSGRDVIGV 600
Query: 165 TETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------- 210
+TGSGKT+AFL+PM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 601 AKTGSGKTIAFLIPMFRHIRDQRP-LENMEGPIGLIMTPTRELATQIHKDCKPFLKALNL 659
Query: 211 ----------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRM 245
+++R GRMIDLL N ++TNL RVTY+VLDEADRM
Sbjct: 660 RAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRM 719
Query: 246 FDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
FDMGFEPQ+ +I+ NIRPDRQ VLFS TFP +E LARK+
Sbjct: 720 FDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKS 759
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 856 KAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 915
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 916 EQERYSVDIAKALRQSGQKVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERL 970
>gi|340992734|gb|EGS23289.1| hypothetical protein CTHT_0009560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1198
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/339 (38%), Positives = 182/339 (53%), Gaps = 71/339 (20%)
Query: 9 LPVVQIEIDPLDAFMNDME-CSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKR 67
+ V + E+DPLDAFM ++E + AE R+ +R A+ A + E +
Sbjct: 448 MDVEEEELDPLDAFMANLEQTNTAED-----RMVKRSQAQAEKKAFEPEAYFSDDDYGYE 502
Query: 68 DKNRE------------------IIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRK 105
+N + I SKI+++ +RKNF+ + +E+ +M+ R
Sbjct: 503 AENADPSAILAMAAKKKKKDIPTIDYSKIELN--PVRKNFWVEPQELAQMTEEEVAELRM 560
Query: 106 QLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAI 164
+LD +K+ K PKP++ W Q GLT IL+T KL E P IQ A +I+SG D + +
Sbjct: 561 ELDGIKVSGKNVPKPVQKWSQCGLTRPILDTIEKLGFEKPTPIQMQALPVIMSGRDVIGV 620
Query: 165 TETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------- 210
+TGSGKT+AF+LPMLRHI +Q PV GDD P+GL++ PT EL Q
Sbjct: 621 AKTGSGKTMAFVLPMLRHIKDQDPVS-GDDGPIGLILTPTRELCTQIYTDLLPFTKVLKL 679
Query: 211 ----------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRM 245
+++R GRMIDLL N ++TNL R TY+VLDEADRM
Sbjct: 680 RAVAAYGGNAIKDQIAELKRGAEIIVATPGRMIDLLAANSGRVTNLKRATYIVLDEADRM 739
Query: 246 FDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
FDMGFEPQ+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 740 FDMGFEPQVMKIFANVRPDRQTILFSATMPRIIDALTKK 778
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A FI+E
Sbjct: 874 KKGVCPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 933
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A+ + KA E S V + + A+ S+ KV G + +G GG L + + R
Sbjct: 934 EQENCASCIAKALEQSGQPVPERVDAMRKSWREKVKAGKVK-EASGFGGKGLERLDKD-R 991
Query: 401 RGKQLRK 407
+LR+
Sbjct: 992 EAARLRE 998
>gi|384485449|gb|EIE77629.1| hypothetical protein RO3G_02333 [Rhizopus delemar RA 99-880]
Length = 1089
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 113/250 (45%), Positives = 146/250 (58%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KI+Y+ RK+FY + E+ M+P R +LD +KIR PKPI W GL L
Sbjct: 406 KIEYEDFRKDFYIEPPELREMTPDQVDLLRIELDGIKIRGVNCPKPITKWTHCGLPVGCL 465
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
E KL +E P AIQA A I++G D + + +TGSGKT+AFLLPM RHI +Q P+ G
Sbjct: 466 EVIRKLKYEKPTAIQAQAIPAIMNGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLEAG- 524
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ P+ ++M PT EL Q ++R
Sbjct: 525 EGPMAIIMTPTRELATQIHKECKPFLKVLNLRAVCAYGGSPIKDQIADLKRGCEIIVCTP 584
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLLC N ++TNL RVTY+V+DEADRMFDMGFEPQ+ +IV N+RP+RQ VLFS TF
Sbjct: 585 GRMIDLLCANSGRVTNLRRVTYMVMDEADRMFDMGFEPQVMKIVNNVRPNRQTVLFSATF 644
Query: 275 PPRVEILARK 284
P ++E LARK
Sbjct: 645 PRQMEALARK 654
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 8/137 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ + N+ IA SV ARGLD K L++VIN++ PN EDYVH ++ K A+ FI+
Sbjct: 752 KSGITNILIATSVAARGLDVKNLKVVINYECPNHMEDYVHRVGRTGRAGNKGTAYTFITP 811
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ YA D+ KA ++S + DL+ +AD+F KV G + G+G GG L R+
Sbjct: 812 DQDRYAMDICKALKMSGQEIPPDLQTLADAFQNKVKEGKERASGSGFGGKGLE----RLD 867
Query: 401 RGKQL-RKAQAKEYGFG 416
+ + L +K Q K YG G
Sbjct: 868 KDRDLVKKIQKKAYGNG 884
>gi|320163352|gb|EFW40251.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 1073
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/336 (39%), Positives = 171/336 (50%), Gaps = 71/336 (21%)
Query: 17 DPLDAFMNDMECSFAE------------HPNNCFRLGRRLPAEDSHSASDYELFMKRAKK 64
D LDA+M +++ + E L L + D A D L
Sbjct: 239 DDLDAYMMNVQATVRELNIRKESGQPATAAATAMTLDSELQSADQLEADDAALIFGHGDN 298
Query: 65 KK-RDKNREIIKSK--------IKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LK 110
+ ++K R + K KI Y + KNFY + E+ RM+ YR++L+ +K
Sbjct: 299 EDLQEKARNVTAKKKELGAVDHSKIVYPEFSKNFYKEVPELARMTELEVKQYRRELENIK 358
Query: 111 IREKCAPKPIKTWRQTG---LTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITET 167
++ P+PIK W Q G LT KIL K E P IQA A ++SG D +AI +T
Sbjct: 359 VKGDQPPRPIKNWSQCGVNALTLKILT--DKCKFEKPTPIQAQAVPAVMSGRDLIAIAKT 416
Query: 168 GSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------QVRR- 214
GSGKTLAF+LPM+RHI QPP + DD P+GL++ PT EL Q Q+R
Sbjct: 417 GSGKTLAFVLPMIRHILAQPP-LSADDGPIGLILTPTRELAVQTYTECKRFAAPNQLRTV 475
Query: 215 --------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDM 248
GRMID+L N ++TNL RVTYLVLDEADRMFDM
Sbjct: 476 CLYGGSAITEQIADLKRGAEIIVCTPGRMIDMLTANSGRVTNLRRVTYLVLDEADRMFDM 535
Query: 249 GFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
GFEPQ+ RIV NIRP RQ VLFS TFP +E LA K
Sbjct: 536 GFEPQVMRIVNNIRPARQTVLFSATFPRSMETLAYK 571
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 93/186 (50%), Gaps = 33/186 (17%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFR 336
++A K L IA SV ARGLD KEL+LV+N+DAPN YEDYVH ++ K ++
Sbjct: 661 LIAFKAGDVRLLIATSVAARGLDVKELKLVVNYDAPNHYEDYVHRVGRTGRAGRKGTSYT 720
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMK 396
F++ E +A D++ A +LS V ++LK + + + A V G GG K
Sbjct: 721 FLTPEQGRFAGDILNALQLSGANVPEELKQLKEQYEADVK------SGKAKGG------K 768
Query: 397 RRIRRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKA 456
+R+GK +GF +++++ + + +K+ + D +S
Sbjct: 769 FSVRKGKG--------FGFTDEENNKANALKNMQKAAMGLGESDD----------EDSGP 810
Query: 457 SASTPS 462
SASTPS
Sbjct: 811 SASTPS 816
>gi|395504324|ref|XP_003756504.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Sarcophilus
harrisii]
Length = 1030
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 165/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 293 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPYRKNFYVEVPELAKMSQDEVNIF 352
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIKTW Q G++ KIL + K +E P IQA A I+SG D +
Sbjct: 353 RLEMEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHCYEKPTPIQAQAIPAIMSGRDLI 412
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 413 GIAKTGSGKTIAFLLPMFRHIMDQRALEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 471
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 472 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 531
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 532 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 572
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 665 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 724
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 725 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 755
>gi|417405652|gb|JAA49530.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 1033
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 165/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 295 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 354
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ+ A I+SG D +
Sbjct: 355 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQSQAIPAIMSGRDLI 414
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 415 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 473
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 474 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 533
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 534 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 574
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 667 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 726
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 727 DQARYAGDIIKALELSGTAVPSDLEKLWSDF 757
>gi|238498592|ref|XP_002380531.1| DEAD/DEAH box RNA helicase [Aspergillus flavus NRRL3357]
gi|220693805|gb|EED50150.1| DEAD/DEAH box RNA helicase [Aspergillus flavus NRRL3357]
Length = 1201
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 194/378 (51%), Gaps = 74/378 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE-------------DSHSASDYELFMKR 61
E+DPLDAFM+++ S + + P + + D + F+
Sbjct: 446 EVDPLDAFMSELAESAPPKKTAGAKFAKAKPQQPEALFGDENDMDMTAVGDGDADDFLAI 505
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
A K K+ K+ + K K++Y+ RK FYT+ ++ MS + R +LD +K+R
Sbjct: 506 ANKAKKKKDIPTVDHK-KVEYEPFRKKFYTEPSDLAAMSEEEAASLRLELDGIKVRGVEV 564
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
P+P+ W Q GL + L+ +L + P +IQA A I+SG D + + +TGSGKT+AFL
Sbjct: 565 PRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFL 624
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+PM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 625 IPMFRHIKDQRP-LENMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 683
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 684 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 743
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK- 304
+ N+RPD+Q VLFS TFP +E LARKT +V I V R D+K
Sbjct: 744 LANVRPDKQTVLFSATFPRNMEALARKTLNKPVEIVVGGRSVVAPEITQIVEVRSEDKKF 803
Query: 305 --ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 804 IRLLELLGNLYSTDENED 821
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 4/134 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 868 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 927
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L + + R
Sbjct: 928 DQERYSVDIAKALKQSGQSVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERLDQE-R 986
Query: 401 RGKQLRKAQAKEYG 414
++R+ + + G
Sbjct: 987 DAARMRERKTYKTG 1000
>gi|345566862|gb|EGX49802.1| hypothetical protein AOL_s00076g686 [Arthrobotrys oligospora ATCC
24927]
Length = 1086
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/348 (37%), Positives = 184/348 (52%), Gaps = 52/348 (14%)
Query: 1 MPETTTKQLPVVQIEIDPLDAFMNDMECSFA--EHPNNCFRLGRRLPAEDSHS----ASD 54
+PET ++ + +IDPLDAFM+++ + P L + +D + +D
Sbjct: 317 VPETQSQMNTEKEEDIDPLDAFMSNIASTATGVPKPQKGPALAEAMFGDDDDNLTAIVND 376
Query: 55 YELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLDL----- 109
+ + A K K+ K + K+ Y+ RK+FY + E+ MS L L
Sbjct: 377 PDDILAMASKMKKKKELPTVDHS-KVQYEPFRKSFYVEPAELADMSTQEVNDLRLVLDGI 435
Query: 110 KIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGS 169
K+R PKP++ W GL + L+ +KL +E P +IQA A I+SG + + + +TGS
Sbjct: 436 KVRGANCPKPVQKWSLLGLPSATLDVINKLEYEKPTSIQAQAIPAIMSGRNVIGVAKTGS 495
Query: 170 GKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------- 210
GKT+AFLLPM RHI +Q P + + P+ LVM PT EL Q
Sbjct: 496 GKTMAFLLPMFRHIKDQRP-LENLEGPIALVMTPTRELATQIFKESKPFLKALNLRGVCA 554
Query: 211 -----------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGF
Sbjct: 555 YGGSPIKDQIAELKRGAEFIVCTPGRMIDLLAANSGRVTNLKRVTYVVLDEADRMFDMGF 614
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRA 298
EPQ+ RI+ NIRPDRQ VLFS TFP ++E LARK + + I R+
Sbjct: 615 EPQVMRIIGNIRPDRQTVLFSATFPSQMEALARKVLIKPVEIVVGARS 662
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + +A SV ARGLD K+L+LV+N+D PN EDYVH ++ K A FI+
Sbjct: 744 KAGVSQVLVATSVAARGLDVKQLKLVVNYDCPNHMEDYVHRVGRTGRAGNKGTAVTFITP 803
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN-LMKRRI 399
+ YA D+ KA +LS V ++++ + SF KV G + +G GG L+ L + R
Sbjct: 804 DQERYAHDIAKALKLSGQDVPEEVQKLVSSFTEKVKAGKEKASSSGFGGKGLDRLDQERE 863
Query: 400 RRGKQLRKA 408
K+ RKA
Sbjct: 864 TARKRERKA 872
>gi|334310946|ref|XP_001370541.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Monodelphis domestica]
Length = 1179
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 165/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 442 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPYRKNFYVEVPELAKMSQDEVNIF 501
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIKTW Q G++ KIL + K +E P IQA A I+SG D +
Sbjct: 502 RLEMEGITVKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMSGRDLI 561
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 562 GIAKTGSGKTIAFLLPMFRHIMDQRALEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 620
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 621 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 680
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 681 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 721
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 814 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 873
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 874 DQARYAGDIIKALELSGTAVPHDLEKLWSDF 904
>gi|344240362|gb|EGV96465.1| putative ATP-dependent RNA helicase DDX46 [Cricetulus griseus]
Length = 1172
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 435 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 494
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 495 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 554
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 555 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 613
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 614 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 673
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 674 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 714
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 807 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 866
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 867 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 897
>gi|342887883|gb|EGU87311.1| hypothetical protein FOXB_02187 [Fusarium oxysporum Fo5176]
Length = 1214
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 188/357 (52%), Gaps = 62/357 (17%)
Query: 18 PLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYE-----------LFMKRAKKKK 66
PLDAFM D+ + + P + + E S +Y+ L AK+KK
Sbjct: 468 PLDAFMADLRQTDVKQPARTSKAQKIQEPEAYFSDDEYDFNKKDTGDANALLAMTAKRKK 527
Query: 67 RDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIK 121
+D I SKI+I + +RKNF+ + E++ ++ A R +LD +K+ K PKP++
Sbjct: 528 KDIP-AIDYSKIEI--EPIRKNFWVEPAELSLLTEAEVADLRLELDGIKVNGKDVPKPVQ 584
Query: 122 TWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLR 181
W Q GLT + L+ L E P IQ A ++SG D + + +TGSGKT+AFLLPM R
Sbjct: 585 KWAQCGLTRQTLDVIDNLGFEKPTPIQMQALPALMSGRDVIGVAKTGSGKTMAFLLPMFR 644
Query: 182 HIWEQPPVVPGDDSPVGLVMAPTGEL---------------------------VRQQVRR 214
HI +QPP + D P+GL+M PT EL +R Q+
Sbjct: 645 HIKDQPP-LKDTDGPIGLIMTPTRELAVQIHRDCKPFLKMMGLRSVCAYGGAPIRDQIAE 703
Query: 215 ------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIR 262
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I N+R
Sbjct: 704 LKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIFANMR 763
Query: 263 PDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINF-DAPNDY 318
PDRQ +LFS T P ++ L +K V I +V R + KE++ ++ D P+ +
Sbjct: 764 PDRQTILFSATMPRIIDSLTKK--VLKNPIEVTVGGRSVVAKEIDQIVEVRDEPSKF 818
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 881 KKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTP 940
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E + + KA E S V + L + + KV G + +G GG L+ + + R
Sbjct: 941 EQENCSVGIAKALEQSGQPVPERLDEMRKAHREKVKSGKAK-DTSGFGGKGLDRLDQE-R 998
Query: 401 RGKQLRK 407
+LR+
Sbjct: 999 EAARLRE 1005
>gi|194894625|ref|XP_001978097.1| GG17877 [Drosophila erecta]
gi|190649746|gb|EDV47024.1| GG17877 [Drosophila erecta]
Length = 1222
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 148/249 (59%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E++RM+ YR L+ ++++ K PKPIKTW Q G++ K ++
Sbjct: 463 VTYAPFRKNFYVEVPELSRMTAGDVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMD 522
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 523 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSLEDGDG 582
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 583 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 641
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 642 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 701
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 702 RQMEALARR 710
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 799 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 858
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAV 367
FI+ E + YA D+++A +LS ++ +L+ +
Sbjct: 859 FITPEQSRYAGDIIRALDLSGTLIPSELQTL 889
>gi|354471891|ref|XP_003498174.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Cricetulus griseus]
Length = 1029
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 292 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 351
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 352 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 411
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 412 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 470
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 471 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 530
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 531 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 571
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 664 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 723
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 724 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 754
>gi|301118572|ref|XP_002907014.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262108363|gb|EEY66415.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 2091
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 147/249 (59%), Gaps = 44/249 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
K++Y +K FY +EI +S A RK ++K+R K P+P++ W Q G + ++L+
Sbjct: 1444 KMNYISFQKKFYVVPKEIKDLSDEEVEAQRKVAEMKVRGKNCPRPLQKWTQCGFSVRMLQ 1503
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K +E P AIQ A I+SG D + I +TGSGKTLAFLLPM RH+ QPP+ ++
Sbjct: 1504 LIKKHGYEEPFAIQKQALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHVLAQPPLQE-NE 1562
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+G++MAP EL +Q + R+ G
Sbjct: 1563 GPIGIIMAPARELAQQIYVEARKFSKGLGLRATAVYGGSSVSEQIANLKRGSDIVICTPG 1622
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+LC + K+ +L RVTY+VLDEADRMFDMGFEPQIT+I+ NIRPDRQ +LFS TFP
Sbjct: 1623 RMIDILCMSAGKMVSLQRVTYVVLDEADRMFDMGFEPQITKIMMNIRPDRQTLLFSATFP 1682
Query: 276 PRVEILARK 284
VE LARK
Sbjct: 1683 RSVESLARK 1691
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 3/133 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + +A SV RGLD K+L LVIN+ PN EDYVH ++ K A+ FIS
Sbjct: 1784 KRKVRTVMVATSVAGRGLDVKDLVLVINYHCPNHMEDYVHRVGRTGRAGRKGTAYTFISP 1843
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ Y+ DLVKA E ++ + +L A+A+ F AKV G + HG+G G +
Sbjct: 1844 DEEEYSVDLVKALENAKQTIPPELTALAEGFTAKVKRGEARYHGSGFKGKGFTFDETERN 1903
Query: 401 RGKQLRKAQAKEY 413
++ Q ++Y
Sbjct: 1904 ETQRTADLQRRQY 1916
>gi|402872563|ref|XP_003900179.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Papio anubis]
Length = 984
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|430814732|emb|CCJ28079.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 1017
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/271 (41%), Positives = 159/271 (58%), Gaps = 42/271 (15%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KI Y+ +RKNFY + E+ MS YR +LD +KIR PKP++ W Q GL +L
Sbjct: 278 KIQYEHIRKNFYVEPHELAEMSEEKVNDYRLELDGIKIRGLGCPKPVQNWSQCGLPAHVL 337
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ LN++ P AIQA A I+SG D + + +TGSGKT+AFLLPM RHI +Q P +
Sbjct: 338 DIIYHLNYQKPTAIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRP-IDSL 396
Query: 194 DSPVGLVMAPTGELVRQ-------------------------QVRR---------GRMID 219
+ P+ L+M PT EL Q +++R GR+ID
Sbjct: 397 EGPIALIMTPTRELAVQIHKECKHFLKAVCAYGGSPIKDQIAELKRGAEIVVCTPGRIID 456
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
LL N ++TNL R +Y+VLDEADRMFD+GFEPQ+ ++V N+RPDRQ VLFS TFP +++
Sbjct: 457 LLGANQGRVTNLKRTSYIVLDEADRMFDLGFEPQVMKVVNNVRPDRQTVLFSATFPKQMD 516
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVI 310
L+RK + I +V AR + E++ ++
Sbjct: 517 ALSRK--ILQKPIEITVGARSVVAPEIQQIV 545
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
IA SV ARGLD K+L+LV+N+D PN EDYVH ++ A FI+ E YA D
Sbjct: 625 IATSVAARGLDIKQLKLVVNYDCPNHLEDYVHRVGRTGRAGETGTAVTFITPEQDRYAAD 684
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQ-LRK 407
+V+A ++S+ + +D++ +AD FI KV LG + G+G GG L+ R+ + + +RK
Sbjct: 685 IVRALKISKAHIPEDVQKLADEFIKKVKLGQEKASGSGFGGKGLD----RLDKDRDFVRK 740
Query: 408 AQAKEYG 414
Q + YG
Sbjct: 741 LQRRAYG 747
>gi|195478796|ref|XP_002100656.1| GE17181 [Drosophila yakuba]
gi|194188180|gb|EDX01764.1| GE17181 [Drosophila yakuba]
Length = 1215
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/249 (43%), Positives = 148/249 (59%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
+ Y RKNFY + E++RM+ YR L+ ++++ K PKPIKTW Q G++ K ++
Sbjct: 456 VTYAPFRKNFYVEVPELSRMTAGDVEKYRSDLEGIQVKGKGCPKPIKTWAQCGVSKKEMD 515
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QP + GD
Sbjct: 516 VLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSLEDGDG 575
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ + ++MAPT EL Q +++R G
Sbjct: 576 A-IAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPG 634
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP
Sbjct: 635 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFP 694
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 695 RQMEALARR 703
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 3/97 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 792 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 851
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIA 373
FI+ E + YA D+++A +LS ++ +L+ + + A
Sbjct: 852 FITPEQSRYAGDIIRALDLSGTLIPAELQTLWTEYKA 888
>gi|171680181|ref|XP_001905036.1| hypothetical protein [Podospora anserina S mat+]
gi|170939717|emb|CAP64943.1| unnamed protein product [Podospora anserina S mat+]
Length = 1221
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 179/331 (54%), Gaps = 60/331 (18%)
Query: 12 VQIEIDPLDAFMNDME-----CSFAEHPNNCFRLGRR-LPAEDSHSASDYELFMKRA--- 62
V EIDPLDAFM D+E + PN G++ E +S +Y +A
Sbjct: 453 VDEEIDPLDAFMADLEQKVPSSGISSKPNGDQANGKKAFEPEAYYSDDNYGYEADKADPS 512
Query: 63 -----KKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIR 112
KK+ K+ +I K++ ++RKNF+ + ++++M+ R +LD +K+
Sbjct: 513 SILAMAAKKKKKDIPVIDYS-KLELNKIRKNFWVEPLDLSQMTEEEANELRLELDGIKVS 571
Query: 113 EKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKT 172
K P+P++ W Q GLT IL+T L +E P IQ A +I+SG D + + +TGSGKT
Sbjct: 572 GKNIPRPVQKWSQCGLTRPILDTIEGLGYEKPTPIQMQALPVIMSGRDVIGVAKTGSGKT 631
Query: 173 LAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------- 210
+AF LPMLRHI +Q PV GDD P+ L+M PT EL Q
Sbjct: 632 MAFALPMLRHIKDQDPVS-GDDGPIALIMTPTRELCTQIYTDLLPFTKVLKLRAVAAYGG 690
Query: 211 --------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQ 253
+++R GRMIDLL N ++TNL R TYLVLDEADRMFDMGFEPQ
Sbjct: 691 NAIKDQIAELKRGAEIIVATPGRMIDLLAANSGRVTNLKRATYLVLDEADRMFDMGFEPQ 750
Query: 254 ITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 751 VMKIFNNVRPDRQTILFSATMPRIIDALTKK 781
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + IA SV ARGLD K+L+LVIN+D PN EDYVH ++ A FI+E
Sbjct: 877 KKGVCPILIATSVAARGLDVKQLKLVINYDVPNHLEDYVHRAGRTGRAGNTGTAVTFITE 936
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S V + L + S+ KV G + +G GG L + + R
Sbjct: 937 EQENCAPGVAKALEQSGQPVPERLNEMRKSWKEKVKAGKAK-DASGFGGKGLERLDKE-R 994
Query: 401 RGKQLRK 407
+LR+
Sbjct: 995 EAARLRE 1001
>gi|224068070|ref|XP_002188600.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Taeniopygia
guttata]
Length = 1031
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/281 (40%), Positives = 163/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +M+ Y
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVY 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +L+ + ++ K PKPIKTW Q G++ KIL K +E P IQ A I++G D +
Sbjct: 354 RLELEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRALEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K+L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS + DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGNPIPPDLEKLWADF 756
>gi|148709275|gb|EDL41221.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 963
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 226 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 285
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 286 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 345
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 346 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 404
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 405 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 464
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 465 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 505
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 598 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 657
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 658 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 688
>gi|355683297|gb|AER97080.1| DEAD box polypeptide 46 [Mustela putorius furo]
Length = 842
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 105 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 164
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 165 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 224
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 225 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 283
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 284 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 343
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 344 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 384
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 477 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 536
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 537 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 567
>gi|20806137|ref|NP_620798.1| probable ATP-dependent RNA helicase DDX46 [Rattus norvegicus]
gi|81890303|sp|Q62780.1|DDX46_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=Helicase of
117.4 kDa
gi|897915|gb|AAC52210.1| RNA helicase [Rattus norvegicus]
gi|78174325|gb|AAI07591.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 1032
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|340521284|gb|EGR51519.1| predicted protein [Trichoderma reesei QM6a]
Length = 1247
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/357 (35%), Positives = 187/357 (52%), Gaps = 58/357 (16%)
Query: 15 EIDPLDAFMNDME-CSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKK-------- 65
+IDPLDAFM+ ++ ++P + ++ +++ + D F ++ ++
Sbjct: 496 DIDPLDAFMDGLQQIEEVKNPVKTTSIAKKQQEPEAYFSDDDYAFNEQGDQEADAALLAI 555
Query: 66 --KRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPK 118
KR K K+D Q +RKNF+ + E++ +S A R +LD +K+ K PK
Sbjct: 556 ANKRKKKDIPTVDYSKLDLQPIRKNFWVEPAELSNLSEAEVADLRMELDGIKVNGKDVPK 615
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P++ W Q GLT + L+ S L + P IQ A ++SG D V + +TGSGKT+AFLLP
Sbjct: 616 PVQKWSQCGLTRQTLDVISSLGFDKPTPIQMQALPALMSGRDVVGVAKTGSGKTMAFLLP 675
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGEL---------------------------VRQQ 211
M RHI +Q P + D P+GL+M PT EL +R+Q
Sbjct: 676 MFRHIKDQEP-LKDTDGPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGGAPIREQ 734
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+ GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 735 IAELKRGAEIIVCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFA 794
Query: 260 NIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPN 316
N+RPDRQ +LFS T P ++ L +K V I +V R + KE+ ++ N
Sbjct: 795 NMRPDRQTILFSATMPRLIDSLTKK--VLKSPIEITVGGRSVVAKEITQIVEVREEN 849
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 915 KKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTP 974
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S+ V + L + S KV G + +G GG L+ + + R
Sbjct: 975 EQENCAPGIAKALEQSDQPVPERLNEMRKSHREKVKSGKAK-DSSGFGGKGLDRLDQE-R 1032
Query: 401 RGKQLRK 407
+LR+
Sbjct: 1033 EAARLRE 1039
>gi|444517226|gb|ELV11421.1| putative ATP-dependent RNA helicase DDX46 [Tupaia chinensis]
Length = 1078
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 341 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 400
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 401 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 460
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 461 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 519
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 520 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 579
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 580 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 620
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 713 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 772
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 773 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 803
>gi|291387348|ref|XP_002710262.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Oryctolagus
cuniculus]
Length = 1030
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 293 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 352
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 353 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 412
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 413 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 471
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 472 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 531
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 532 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 572
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 665 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 724
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 725 DQARYAGDIIKALELSGTTVPSDLEKLWSDF 755
>gi|62089534|gb|AAH92240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 1027
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|336272585|ref|XP_003351049.1| hypothetical protein SMAC_04353 [Sordaria macrospora k-hell]
gi|380090816|emb|CCC04986.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1190
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/331 (38%), Positives = 172/331 (51%), Gaps = 61/331 (18%)
Query: 12 VQIEIDPLDAFMNDME--CSFAEHPNNCFRLGRR---LPAEDSHSASDYEL--------- 57
V E+DPLDAFM +E S E L + P E S DY
Sbjct: 429 VDDEVDPLDAFMAGLEQTASSEEVQTKIDTLAEKKGNTPPEAYFSDDDYGYEADGTDPTS 488
Query: 58 FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLD-----LKIR 112
+ A KKK+ I SK+ D +RKNF+ + E+++MS +L +K+
Sbjct: 489 ILAMASKKKKKDIPTIDYSKL--DLNPIRKNFWVEPYELSQMSEEELAELRLELDGIKVS 546
Query: 113 EKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKT 172
K PKP++ W Q GLT IL+T L +E P IQ A +I+SG D + + +TGSGKT
Sbjct: 547 GKNIPKPVQKWSQCGLTRPILDTIESLGYEKPTPIQMQALPVIMSGRDVIGVAKTGSGKT 606
Query: 173 LAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------- 210
+AF LP+LRH+ +Q PV GDD + L+M PT EL Q
Sbjct: 607 MAFALPLLRHVKDQDPVT-GDDGAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGG 665
Query: 211 --------QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQ 253
+++RG R+IDLL NG ++TNL R TYLVLDEADRMFDMGFEPQ
Sbjct: 666 NAIKDQIAELKRGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEPQ 725
Query: 254 ITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 726 VMKIFNNVRPDRQTILFSATMPRIIDSLTKK 756
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 7/186 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + IA S+ ARGLD K+L+LVIN+DAPN EDYVH ++ A FI+E
Sbjct: 852 KKGVCPILIATSIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 911
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A+ + KA E S V D L + ++ KV G + +G GG L + +
Sbjct: 912 EQENCASGIAKALEQSGQPVPDRLNEMRKAWKEKVKAGKAK-DASGFGGKGLEKLDKDRE 970
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
+ + K G +D + ++G +K ++ Q +++ I + A SKA
Sbjct: 971 AARMRERKTHKAEGEEDDVKEDAPAEDGEKKDKTKVAIQSAVSAIVSRDA---SKAETED 1027
Query: 461 PSLISV 466
+ I++
Sbjct: 1028 KTKIAI 1033
>gi|160420299|ref|NP_666087.3| probable ATP-dependent RNA helicase DDX46 [Mus musculus]
Length = 1031
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|322797566|gb|EFZ19610.1| hypothetical protein SINV_13775 [Solenopsis invicta]
Length = 692
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 142/231 (61%), Gaps = 45/231 (19%)
Query: 98 RMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPAS 152
RM+P Y+++L+ ++++ K PKPIK+W Q G+T K LE KL +E P IQ A
Sbjct: 2 RMTPEEVEVYKEELEGIRVKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAI 61
Query: 153 ALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-- 210
I+SG D + I +TGSGKTLAFLLPM RHI +QPP+ G D P+ L+M PT EL Q
Sbjct: 62 PAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLADG-DGPIALIMTPTRELCMQIG 120
Query: 211 ----------------------------QVRR---------GRMIDLLCKNGVKITNLTR 233
+++R GRMID+L N ++TNL R
Sbjct: 121 RDSKKFTKSLGLSHVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 180
Query: 234 VTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
VTY+VLDEADRMFDMGFEPQ+ RI++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 181 VTYVVLDEADRMFDMGFEPQVMRIMENVRPDRQTVLFSATFPRQMEALARR 231
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K L +A SV ARGLD K L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 320 ILDFKAGRTKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT 379
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
FI+ E YA D+++A EL+ + V + L+ + + + A+ +VH
Sbjct: 380 FITSEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVH 426
>gi|85540944|sp|Q569Z5.2|DDX46_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
Length = 1032
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|40788370|dbj|BAA34521.2| KIAA0801 protein [Homo sapiens]
Length = 1058
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 320 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 379
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 380 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 439
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 440 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 498
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 499 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 558
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 559 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 599
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 692 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 751
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 752 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 782
>gi|410948190|ref|XP_003980824.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Felis catus]
Length = 1030
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 293 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 352
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 353 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 412
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 413 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 471
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 472 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 531
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 532 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 572
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 665 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 724
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 725 DQARYAGDIIKALELSGTAVPSDLEKLWSDF 755
>gi|391865375|gb|EIT74659.1| RNA helicase [Aspergillus oryzae 3.042]
Length = 1186
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 194/378 (51%), Gaps = 74/378 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE-------------DSHSASDYELFMKR 61
E+DPLDAFM+++ S + + P + + D + F+
Sbjct: 431 EVDPLDAFMSELAESAPPKKTAGAKFAKAKPQQPEALFGDENDMDMTAVGDGDADDFLAI 490
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
A K K+ K+ + K K++Y+ RK FYT+ ++ MS + R +LD +K+R
Sbjct: 491 ANKAKKKKDIPTVDHK-KVEYEPFRKKFYTEPSDLAAMSEEEAASLRLELDGIKVRGVEV 549
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
P+P+ W Q GL + L+ +L + P +IQA A I+SG D + + +TGSGKT+AFL
Sbjct: 550 PRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFL 609
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+PM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 610 IPMFRHIKDQRP-LENMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 668
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 669 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 728
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK- 304
+ N+RPD+Q VLFS TFP +E LARKT +V I V R D+K
Sbjct: 729 LANVRPDKQTVLFSATFPRNMEALARKTLNKPVEIVVGGRSVVAPEITQIVEVRSEDKKF 788
Query: 305 --ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 789 IRLLELLGNLYSTDENED 806
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 853 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 912
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 913 DQERYSVDIAKALKQSGQSVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERL 967
>gi|348575055|ref|XP_003473305.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Cavia porcellus]
Length = 1031
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS VV DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTVVPPDLEKLWSDF 756
>gi|213405989|ref|XP_002173766.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces japonicus
yFS275]
gi|212001813|gb|EEB07473.1| ATP-dependent RNA helicase Prp11 [Schizosaccharomyces japonicus
yFS275]
Length = 1056
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/352 (38%), Positives = 181/352 (51%), Gaps = 65/352 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASD----YELFMKRAKKK----- 65
E+DPLDA+M +E + R G L AE +D YE A+++
Sbjct: 342 EVDPLDAYMASLEGV-----TDVVRPGL-LNAEVVDGTNDEDDLYEQSTTLAEEENILAL 395
Query: 66 --KRDKNREIIK-SKIKIDYQQLRKNFYTQAREITRMSPAYRKQLDL-----KIREKCAP 117
KR K ++ I KI+Y+ RKNFY + E+ ++S +L L KIR P
Sbjct: 396 AAKRMKKKDFITVDHSKINYEDFRKNFYVEPEELKKLSLEEVDELRLSLGGIKIRGIDCP 455
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
KP+ +W Q GL+ + L L E P AIQA A I +G D + + +TGSGKT+AFLL
Sbjct: 456 KPVTSWSQCGLSVQTLSVIRSLGFEEPSAIQAQAIPAITAGRDVIGVAKTGSGKTIAFLL 515
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR----------------------- 214
PM RHI +Q P+ G + PV ++M PT EL Q R
Sbjct: 516 PMFRHIMDQRPLRNG-EGPVAVIMTPTRELAVQIFRECKPFAKALDLRATCAYGGAPIKD 574
Query: 215 ----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
GRMID+L N ++TNL R TY+VLDEADRMFD+GFEPQ+ RI+
Sbjct: 575 QIAELKRGAEIVVCTPGRMIDVLNANSGRVTNLHRCTYVVLDEADRMFDLGFEPQVMRIL 634
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
NIRPDRQ VLFS TFP +E LARK V I +V R + E+E ++
Sbjct: 635 NNIRPDRQVVLFSATFPRAMEALARK--VLKKPIEITVGGRSVVAAEVEQLV 684
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 6/134 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + ++ IA SV ARGLD K L+LV+N+D PN EDYVH ++ A F++
Sbjct: 756 KMGIFDVLIATSVAARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFVTP 815
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ + YA + KA ++S+ V +L+ +A+ F+ V G + G+G GG L+ + R
Sbjct: 816 DQSRYAVGIAKALKMSKQPVPLELQNLANEFLKNVKSGKEKAAGSGFGGKGLSRLD-ETR 874
Query: 401 RGKQLRKAQAKEYG 414
+ RK Q + +G
Sbjct: 875 NAE--RKMQRRAFG 886
>gi|119582642|gb|EAW62238.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
gi|119582646|gb|EAW62242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
Length = 883
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|332234495|ref|XP_003266442.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Nomascus
leucogenys]
Length = 1031
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|348575057|ref|XP_003473306.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Cavia porcellus]
Length = 1032
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS VV DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTVVPPDLEKLWSDF 756
>gi|426350064|ref|XP_004042602.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like, partial
[Gorilla gorilla gorilla]
Length = 882
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 145 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 204
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 205 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 264
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 265 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 323
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 324 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 383
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 384 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 424
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 517 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 576
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 577 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 607
>gi|23336902|tpg|DAA00076.1| TPA_exp: Prp5-like DEAD-box protein [Homo sapiens]
gi|410212896|gb|JAA03667.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212898|gb|JAA03668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212900|gb|JAA03669.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256700|gb|JAA16317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256702|gb|JAA16318.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410300506|gb|JAA28853.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410350251|gb|JAA41729.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
Length = 1032
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|390459218|ref|XP_002744211.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Callithrix
jacchus]
Length = 1031
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|41327773|ref|NP_055644.2| probable ATP-dependent RNA helicase DDX46 [Homo sapiens]
gi|332821955|ref|XP_517939.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan
troglodytes]
gi|397518269|ref|XP_003829316.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan paniscus]
gi|116241326|sp|Q7L014.2|DDX46_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=PRP5 homolog
gi|15126766|gb|AAH12304.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapiens]
gi|119582645|gb|EAW62241.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_d [Homo
sapiens]
Length = 1031
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|169781778|ref|XP_001825352.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Aspergillus
oryzae RIB40]
gi|91207409|sp|Q2U2J6.1|PRP5_ASPOR RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|83774094|dbj|BAE64219.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1186
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 194/378 (51%), Gaps = 74/378 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE-------------DSHSASDYELFMKR 61
E+DPLDAFM+++ S + + P + + D + F+
Sbjct: 431 EVDPLDAFMSELAESAPPKKTAGAKFAKAKPQQPEALFGDENDMDMTAVGDGDADDFLAI 490
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
A K K+ K+ + K K++Y+ RK FYT+ ++ MS + R +LD +K+R
Sbjct: 491 ANKAKKKKDIPTVDHK-KVEYEPFRKKFYTEPSDLAAMSEEEAASLRLELDGIKVRGVEV 549
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
P+P+ W Q GL + L+ +L + P +IQA A I+SG D + + +TGSGKT+AFL
Sbjct: 550 PRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFL 609
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+PM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 610 IPMFRHIKDQRP-LENMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 668
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 669 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 728
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK- 304
+ N+RPD+Q VLFS TFP +E LARKT +V I V R D+K
Sbjct: 729 LANVRPDKQTVLFSATFPRNMEALARKTLNKPVEIVVGGRSVVAPEITQIVEVRSEDKKF 788
Query: 305 --ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 789 IRLLELLGNLYSTDENED 806
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 853 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 912
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 913 DQERYSVDIAKALKQSGQSVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERL 967
>gi|344264944|ref|XP_003404549.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Loxodonta
africana]
Length = 1031
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|158257008|dbj|BAF84477.1| unnamed protein product [Homo sapiens]
Length = 1032
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|5410326|gb|AAD43033.1| RNA helicase [Homo sapiens]
Length = 1031
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/280 (40%), Positives = 164/280 (58%), Gaps = 46/280 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPLAVIMTPTRELALQIPKGVRSFKTLG 472
Query: 211 -----------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADR 244
+++R GRMID+L N ++TNL RVTY+VLDEADR
Sbjct: 473 LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADR 532
Query: 245 MFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
MFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 572
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 665 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 724
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 725 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 755
>gi|363739175|ref|XP_414629.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Gallus
gallus]
Length = 1028
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +M+ Y
Sbjct: 291 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVY 350
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIKTW Q G++ KIL K +E P IQ+ A I++G D +
Sbjct: 351 RLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLI 410
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 411 GIAKTGSGKTIAFLLPMFRHIMDQRALEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 469
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 470 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEAD 529
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 530 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 570
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K+L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 663 KNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITE 722
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS + DL+ + F
Sbjct: 723 DQARYAGDIIKALELSGNPIPADLEKLWADF 753
>gi|73971268|ref|XP_531911.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Canis lupus
familiaris]
gi|194219918|ref|XP_001918233.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Equus
caballus]
gi|426229554|ref|XP_004008855.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Ovis aries]
Length = 1031
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|301754307|ref|XP_002912967.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Ailuropoda melanoleuca]
Length = 1031
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|157138330|ref|XP_001657248.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108869525|gb|EAT33750.1| AAEL013985-PA [Aedes aegypti]
Length = 1029
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/249 (44%), Positives = 146/249 (58%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I+Y RK FY + EI +M+ A Y+ +L+ + ++ K PKPIKTW G++ K +
Sbjct: 322 INYMPFRKAFYVEVPEIAKMTHAEVGVYKTELEGITVKGKGCPKPIKTWAHCGVSKKEFD 381
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQ A I+SG D + I +TGSGKTLAF+LPM RHI +QPP+ G D
Sbjct: 382 VLRKLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFILPMFRHILDQPPLEDG-D 440
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ ++M PT EL Q +++R G
Sbjct: 441 GPISIIMTPTRELCMQIGKDIKKFAKSLNLRAVCVYGGTGISEQIAELKRGAEIIVCTPG 500
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFD+GFEPQ+ RI+ NIRPDRQ V+FS TFP
Sbjct: 501 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDLGFEPQVMRIIDNIRPDRQTVMFSATFP 560
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 561 RQMEALARR 569
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 3/107 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 658 IIDFKQGRVKLLIATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWT 717
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH 383
F++ E Y+ D+++A ELS V DDL+++ D++ A +VH
Sbjct: 718 FLTHEQGRYSGDIIRALELSGGTVPDDLRSLWDTYKAAQEAEGKKVH 764
>gi|326928709|ref|XP_003210518.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Meleagris gallopavo]
Length = 1027
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +M+ Y
Sbjct: 290 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVY 349
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIKTW Q G++ KIL K +E P IQ+ A I++G D +
Sbjct: 350 RLEMEGITVKGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLI 409
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 410 GIAKTGSGKTIAFLLPMFRHIMDQRALEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 468
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 469 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEAD 528
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 529 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 569
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K+L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 662 KNGTCKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYTFITE 721
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS + DL+ + F
Sbjct: 722 DQARYAGDIIKALELSGNPIPADLEKLWADF 752
>gi|386781262|ref|NP_001248109.1| probable ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|380818496|gb|AFE81121.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|383423315|gb|AFH34871.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|384950636|gb|AFI38923.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
Length = 1032
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|119582644|gb|EAW62240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_c [Homo
sapiens]
Length = 1032
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|358335026|dbj|GAA28925.2| probable ATP-dependent RNA helicase DDX46, partial [Clonorchis
sinensis]
Length = 746
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 151/250 (60%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KI Y+ RKNFY + E+ +MS AYR L+ +++R + PKP+K W Q G+++++L
Sbjct: 309 KIHYRPFRKNFYIEVPELAKMSKEDVKAYRASLENIRVRGQDCPKPLKNWVQAGISSRLL 368
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ N + P IQ A +++SG D + I +TGSGKTLAFL+P++RH+ Q P+ PG
Sbjct: 369 SCLKRNNFDKPTPIQCQALPVLMSGRDMIGIAKTGSGKTLAFLVPLMRHLEHQDPLEPG- 427
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
D P+ L++APT EL Q +++R
Sbjct: 428 DGPIALLLAPTRELALQIFKEAKKLAQAVDARVVCVYGGTGISEQIAELKRGAEIIVCTP 487
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L NG ++TNL R TY+VLDEADRMFD+GFEPQ+ RIV+N RPDRQ +FS TF
Sbjct: 488 GRMIDMLAANGGRVTNLRRCTYIVLDEADRMFDLGFEPQVMRIVENCRPDRQTAMFSATF 547
Query: 275 PPRVEILARK 284
P +E+LARK
Sbjct: 548 PRLMELLARK 557
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYA 346
L IA SV ARGLD +L +VIN+D PN YEDYVH C ++ K A+ F++ + A
Sbjct: 656 LLIATSVAARGLDVSDLMVVINYDCPNHYEDYVHRCGRTGRAGNKGFAYTFLTPDQERNA 715
Query: 347 TDLVKAFELSELVVRDDLKAVADSF 371
D+V+AF+ S +DL A+ +S+
Sbjct: 716 GDIVRAFKQSGQKPPEDLLAMWNSY 740
>gi|119895518|ref|XP_586902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|297477226|ref|XP_002689237.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|296485325|tpg|DAA27440.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Bos taurus]
Length = 1031
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMS----PAY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSLEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|431892646|gb|ELK03079.1| Putative ATP-dependent RNA helicase DDX46 [Pteropus alecto]
Length = 1580
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 622 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 681
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 682 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 741
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 742 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 800
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 801 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 860
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 861 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 901
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 994 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 1053
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 1054 DQARYAGDIIKALELSGTTVPPDLEKLWSDF 1084
>gi|67521618|ref|XP_658870.1| hypothetical protein AN1266.2 [Aspergillus nidulans FGSC A4]
gi|74657573|sp|Q5BDW4.1|PRP5_EMENI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|40746703|gb|EAA65859.1| hypothetical protein AN1266.2 [Aspergillus nidulans FGSC A4]
gi|259488412|tpe|CBF87827.1| TPA: Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC
3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BDW4]
[Aspergillus nidulans FGSC A4]
Length = 1173
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 177/326 (54%), Gaps = 57/326 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE----DSHSAS-------DYELFMKRAK 63
E+DPLDAFM+++ S + + E D H S D E F+ A
Sbjct: 420 ELDPLDAFMSELAESAPPKKKAGAKFSKAQEPEAIFGDEHDVSMTAVGEGDAEDFLAIAS 479
Query: 64 KKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPK 118
K K+ K+ + K++Y+ R+ FYT+ ++ +MS R +LD +K+R PK
Sbjct: 480 KAKKKKDIPTVDHN-KVEYEPFRRKFYTEPSDLAQMSEEEAANLRLELDGIKVRGLDVPK 538
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P++ W Q GL + L+ KL + +IQA A I+SG D + + +TGSGKT+AFL+P
Sbjct: 539 PVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIP 598
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------- 210
M RHI +Q P + + P+GL+M PT EL Q
Sbjct: 599 MFRHIKDQRP-LENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQ 657
Query: 211 --QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+
Sbjct: 658 IAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILS 717
Query: 260 NIRPDRQAVLFSPTFPPRVEILARKT 285
N+RPDRQ VLFS TFP +E LARKT
Sbjct: 718 NVRPDRQTVLFSATFPRNMEALARKT 743
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 840 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 899
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 900 DQERYSVDIAKALKQSGQEVPEAVQKLVDSFLEKVKAGKEKASNSGFGGKGLERL 954
>gi|149039843|gb|EDL93959.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 940
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|351708460|gb|EHB11379.1| Putative ATP-dependent RNA helicase DDX46 [Heterocephalus glaber]
Length = 1255
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 565 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 624
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 625 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 684
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 685 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 743
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 744 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 803
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 804 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 844
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 937 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 996
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS VV DL+ + F
Sbjct: 997 DQARYAGDIIKALELSGTVVPPDLEKLWSDF 1027
>gi|453089161|gb|EMF17201.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1160
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/331 (39%), Positives = 174/331 (52%), Gaps = 67/331 (20%)
Query: 11 VVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPA--------EDSHS-----ASDYEL 57
V ++DPLDAFMN +E + P + G LP ED D E
Sbjct: 391 AVDEDVDPLDAFMNTLE----DQPRS---RGHALPNKREPQLFDEDDGPGLVAVGDDPED 443
Query: 58 FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIR 112
++ KR+K + K++Y+ KNFY ++ E+ M+ R +LD + +R
Sbjct: 444 LLRGG--GKRNKKEILPVDHSKVEYEDFAKNFYRESVEVAEMTEKEVATLRAELDNITVR 501
Query: 113 EKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKT 172
P+PI W Q G +IL+ E P +IQ+ A I+SG D++ I +TGSGKT
Sbjct: 502 GLDQPRPITKWSQCGFGAQILDVIKANKFEAPTSIQSQALPAIMSGRDTIGIAKTGSGKT 561
Query: 173 LAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------- 210
LAF LPM RHI +Q PV + P+GL+MAPT EL Q
Sbjct: 562 LAFTLPMFRHIKDQRPVA-NLEGPIGLIMAPTRELAVQIHRECKPYLKALNLRGVCAYGG 620
Query: 211 --------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQ 253
+++R GR+IDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ
Sbjct: 621 APIKDQIAELKRGAEVVVCTPGRLIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQ 680
Query: 254 ITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
I R++ N+RPDRQ VLFS TFP ++E LARK
Sbjct: 681 IQRVLGNVRPDRQTVLFSATFPKKMESLARK 711
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 61/113 (53%), Gaps = 3/113 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
IL K + +A SV ARGLD K+L+LVIN+D+PN EDYVH ++ A
Sbjct: 803 ILDFKAGAVPIMVATSVAARGLDVKQLKLVINYDSPNHGEDYVHRAGRTGRAGNTGTAVT 862
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGG 389
F++ E +A LV+ E S+ V + LK +A S KV G G+G GG
Sbjct: 863 FVTPEQEHFAPFLVRCLEDSKQDVPETLKEMAASHKRKVEAGQASKVGSGFGG 915
>gi|428174215|gb|EKX43112.1| hypothetical protein GUITHDRAFT_159806 [Guillardia theta CCMP2712]
Length = 1097
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/289 (41%), Positives = 158/289 (54%), Gaps = 46/289 (15%)
Query: 40 LGRRLPAEDSHSASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRM 99
LG R+ EDS D EL K + + N + +++Y R+NFY + EI +M
Sbjct: 339 LGVRMEVEDSIPDLDEELKRKNEEFDIKQWNLRPVDHS-QMNYVPFRRNFYIEVPEIAKM 397
Query: 100 S----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASAL 154
+ YR LD +K+R K P PIKTW Q GL+ ++L KLN + P IQ A +
Sbjct: 398 TDDEVKDYRSTLDGIKVRGKRCPNPIKTWFQCGLSDRVLAVIKKLNWKKPTPIQCQALPV 457
Query: 155 IISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---Q 211
I+SG D +A+ +TGSGKT +LLP RH+ +QP + G D PV LV P EL Q Q
Sbjct: 458 IMSGRDCIAVAKTGSGKTAGYLLPCFRHVLDQPAIEIG-DGPVALVFTPARELCIQVFLQ 516
Query: 212 VRR------------------------------------GRMIDLLCKNGVKITNLTRVT 235
+ GRMID+LC N ++TNL RVT
Sbjct: 517 AKHFFKHTGVTGCAVYGGAPVADQIAELKKGPQIVICTPGRMIDMLCANAGRVTNLRRVT 576
Query: 236 YLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
YL +DEADRMFD+GFEPQIT++++N RPDRQ V FS TFP ++E LA+K
Sbjct: 577 YLTIDEADRMFDLGFEPQITKVLENTRPDRQTVFFSATFPKQMENLAKK 625
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 83/182 (45%), Gaps = 12/182 (6%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K V N+ IA S+ ARGLD L LV+N+DAP+ YEDYVH ++ K A+ F+
Sbjct: 718 KNQVANILIATSLAARGLDVPGLNLVVNYDAPSHYEDYVHRVGRTGRAGRKGTAYTFVDP 777
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
DLV+A LS V DL+ + + A+ G G+G GG +
Sbjct: 778 SQRQLIPDLVRALTLSNRPVPKDLRDLVNEIKAEKKKGNKVAKGSGFGGKGYKFDEAEQA 837
Query: 401 RGKQLRKAQAKEYGF--GEDKSDSE-----DVDEGTRKSGGDISHQDSIAKIA--TIAAA 451
+ K+ K+ GE+ SD E D D + + + HQ +A + TI
Sbjct: 838 KMKEAAARSRKQLLLQNGEEVSDDEEEPMQDEDFEEQATNLTVQHQQKVADWSAKTIEKE 897
Query: 452 SN 453
SN
Sbjct: 898 SN 899
>gi|425774421|gb|EKV12728.1| DEAD/DEAH box RNA helicase [Penicillium digitatum PHI26]
gi|425783591|gb|EKV21433.1| DEAD/DEAH box RNA helicase [Penicillium digitatum Pd1]
Length = 1076
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 197/401 (49%), Gaps = 83/401 (20%)
Query: 1 MPETTTKQLPVVQI------EIDPLDAFMNDME----------CSFA-----EHPNNCFR 39
M ETT+ Q + EIDPLDAFM +++ +FA + P F
Sbjct: 289 MEETTSAQADSTPMDVDDAEEIDPLDAFMAELQDSTPPERTIGATFAKKTTHQRPEAMFG 348
Query: 40 LGRRLPAEDSHSASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRM 99
+ ++ A KKK+ + +I KIDY+ RK FYT+ + M
Sbjct: 349 DDEDVDVTAVGDEKAEDVLALAAIKKKKREMPDI--DHTKIDYEPFRKEFYTEPSNLAEM 406
Query: 100 SPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASAL 154
+ R +LD +K+R + PKP++ W Q GL + L+ KL EN +IQA A
Sbjct: 407 TEEEVANLRLELDGIKVRGRDVPKPVQKWSQCGLGVQTLDVVHKLGWENLTSIQAQAIPT 466
Query: 155 IISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---- 210
I+SG D + + +TGSGKT AFL+PM RHI +Q P+ D P+G++++PT EL Q
Sbjct: 467 IMSGRDVIGVAKTGSGKTGAFLVPMFRHIKDQRPLA-STDGPIGMILSPTRELATQIHKD 525
Query: 211 --------------------------QVRR---------GRMIDLLCKNGVKITNLTRVT 235
+++R GR+IDLL N ++ NL R+T
Sbjct: 526 CKPFLKALGLRAVCAYGGAPIKDQIAELKRGAEIIVCTAGRLIDLLAANQGRVLNLRRIT 585
Query: 236 YLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT---------- 285
Y+VLDE DRMFDMGF PQ+ +I+ +IRPDRQ VLFS TFP +E LARKT
Sbjct: 586 YVVLDEGDRMFDMGFGPQVVKIMASIRPDRQTVLFSATFPKSMEALARKTLNEPVEITVG 645
Query: 286 --NVCNLSIANSVRARGLDEK---ELELVINFDAPNDYEDY 321
+V I V R D+K LEL+ N + EDY
Sbjct: 646 GKSVVAPEITQIVEVRNNDQKFFRLLELLGNLYEDDANEDY 686
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 91/186 (48%), Gaps = 11/186 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + +A SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 732 KAGIFPILVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTE 791
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQ---VHGTGHGGVALNLMKR 397
E YA D+ KA S V + L+ + D F KV G + HG G G+ M+R
Sbjct: 792 EQDRYALDIAKALRQSGQEVPEPLQKLVDGFNEKVKSGKEKNFSRHGFGGKGLDRLNMER 851
Query: 398 RIRRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKAS 457
R LR+ +A Y G+D D ED E ++S + S + A + AS
Sbjct: 852 ETAR---LRERKA--YKTGDDMDDEEDKLETEQESDDRFNKALSAVRSAAEPPVPAATAS 906
Query: 458 ASTPSL 463
S P +
Sbjct: 907 VSMPGV 912
>gi|443895251|dbj|GAC72597.1| RNA helicase [Pseudozyma antarctica T-34]
Length = 1151
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/275 (42%), Positives = 150/275 (54%), Gaps = 46/275 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMSPAYRKQLDLK-----IREKCAPKPIKTWRQTGLTTKILE 134
+DY+ RK FY EI MS Q+ L+ +R K PKP+ W GL L+
Sbjct: 431 VDYEPFRKVFYHPPAEIDDMSEELANQIRLEMDAITVRGKDCPKPLTKWSHCGLPASCLD 490
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L +++P IQ+ A I+SG D + + +TGSGKT+AFLLPM RHI +Q PV +
Sbjct: 491 VIKRLGYDSPTPIQSQAIPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVETSE- 549
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
PVG++M PT EL Q R G
Sbjct: 550 GPVGIIMTPTRELAVQIYREMRPFIRALGLRAACVYGGAPISEQIAEMKKTADIVVATPG 609
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ RIV NIRPDRQ VLFS TFP
Sbjct: 610 RMIDLLTANSGRVTNLRRVTYLVLDEADRMFDMGFEPQVMRIVNNIRPDRQTVLFSATFP 669
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
++E LARK + N + +V R + E+E ++
Sbjct: 670 KQMESLARKV-LKNKPLEITVGGRSVVAAEIEQIV 703
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATDL 349
A SV ARGLD K+L+LVIN+D PN EDYVH ++ K F++ E YA D+
Sbjct: 784 ATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFVTPEQDRYARDI 843
Query: 350 VKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKAQ 409
+ A + S V +L+ +A+SF K+ G + G+G GG L+ ++ R K L KAQ
Sbjct: 844 IAALKASGAHVPVELEKMAESFKEKLAAGKAKAAGSGFGGKGLDRLE--TDREKAL-KAQ 900
Query: 410 AKEYGFGEDKSDSEDVDE-GTRKSGGDISHQDSIAKIATIAAASNSK 455
YG +VDE G + GD D K T AS+S+
Sbjct: 901 KSAYG---------EVDEDGKAAAAGDTG--DGAGKGGTQTGASSSE 936
>gi|395815581|ref|XP_003781304.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Otolemur garnettii]
Length = 872
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 163/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 135 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 194
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 195 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 254
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q G + P+ ++M PT EL Q
Sbjct: 255 GIAKTGSGKTIAFLLPMFRHIMDQWSSEEG-EGPIAVIMTPTRELTLQITKECKKFSKTL 313
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 314 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 373
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 374 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 414
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 507 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 566
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 567 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 597
>gi|451848387|gb|EMD61693.1| hypothetical protein COCSADRAFT_163118 [Cochliobolus sativus
ND90Pr]
Length = 1132
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 198/380 (52%), Gaps = 66/380 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRL------PAEDSHSASDYELFMKRAKKKKRD 68
EIDPLDAFM D+ P+ G+ + P E S A D L RA KKK+
Sbjct: 380 EIDPLDAFMADL---TEPQPSRGAPSGQAMFADELEPVETSVEAQD--LLELRAAKKKKK 434
Query: 69 KNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTW 123
+ + K+ +Y+ RK+FYT+ E+++M+P R +LD +K++ P+P+ W
Sbjct: 435 EVATVDHDKV--EYEPFRKSFYTEPLEVSQMTPEEVADLRHELDGIKVKPDDVPRPVTKW 492
Query: 124 RQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHI 183
Q GL ++ F+++ ++ P +IQA A+ + +SG D + + +TGSGKTLAF +PM+RHI
Sbjct: 493 AQMGLLQATMDVFTRVGYQKPTSIQAQAAPISLSGRDLIGVAKTGSGKTLAFGIPMIRHI 552
Query: 184 WEQPPVVPGDDSPVGLVMAPTGELVRQQVRR----------------------------- 214
+Q P+ P D P+GL++APT EL Q V
Sbjct: 553 LDQRPLKPS-DGPIGLILAPTRELSLQIVHELKPFLSASGITIKCAYGGQPISDQIAMIK 611
Query: 215 -----------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRP 263
GR+IDL+ N ++ + R+TY+VLDEADRMFDMGFEPQ+ +I+ N+RP
Sbjct: 612 RGGIHILCGTPGRLIDLMTANQGRVLSFRRITYVVLDEADRMFDMGFEPQVMKILANVRP 671
Query: 264 DRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH 323
DRQ VLFS T P + LARK N ++ R E+ +I+ PN YE ++
Sbjct: 672 DRQTVLFSATMPKNMVALARK--ALNNPAEVTIGGRSKVAPEITQIISI-VPNSYEKKIN 728
Query: 324 HCCQSWLKSCAFRFISEENA 343
L F +ENA
Sbjct: 729 QL----LLHLGQLFSEDENA 744
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
+ V ++ IA SV ARGLD L LV+NFD P EDYVH C ++ K A I
Sbjct: 791 RQGVLSILIATSVAARGLDVPGLALVLNFDCPTHLEDYVHRCGRTGRAGNKGTAITLIEN 850
Query: 341 E-NAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLG 378
+A LVKA + S V + L+ +AD+F K G
Sbjct: 851 PGQERFAIHLVKALKESGAEVPEKLQEMADTFHEKAKAG 889
>gi|451998973|gb|EMD91436.1| hypothetical protein COCHEDRAFT_1101623 [Cochliobolus
heterostrophus C5]
Length = 1058
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 198/380 (52%), Gaps = 66/380 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRL------PAEDSHSASDYELFMKRAKKKKRD 68
EIDPLDAFM D+ P+ G+ + P E S A D L RA KKK+
Sbjct: 306 EIDPLDAFMADL---TEPQPSRGAPSGQAMFADELEPVETSVEAQD--LLELRAAKKKKK 360
Query: 69 KNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTW 123
+ + K+ +Y+ RK+FYT+ E+++M+P R +LD +K++ P+P+ W
Sbjct: 361 EVATVDHDKV--EYEPFRKSFYTEPLEVSQMTPEEVADLRHELDGIKVKPDDVPRPVTKW 418
Query: 124 RQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHI 183
Q GL ++ F+++ ++ P +IQA A+ + +SG D + + +TGSGKTLAF +PM+RHI
Sbjct: 419 AQMGLLQATMDVFTRVGYQKPTSIQAQAAPISLSGRDLIGVAKTGSGKTLAFGIPMIRHI 478
Query: 184 WEQPPVVPGDDSPVGLVMAPTGELVRQQVRR----------------------------- 214
+Q P+ P D P+GL++APT EL Q V
Sbjct: 479 LDQRPLKPS-DGPIGLILAPTRELSLQIVHELKPFLSASGITIKCAYGGQPISDQIAMIK 537
Query: 215 -----------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRP 263
GR+IDL+ N ++ + R+TY+VLDEADRMFDMGFEPQ+ +I+ N+RP
Sbjct: 538 RGGIHILCGTPGRLIDLMTANQGRVLSFRRITYVVLDEADRMFDMGFEPQVMKILANVRP 597
Query: 264 DRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH 323
DRQ VLFS T P + LARK N ++ R E+ +I+ PN YE ++
Sbjct: 598 DRQTVLFSATMPKNMVALARK--ALNNPAEVTIGGRSKVAPEITQIISI-VPNSYEKKIN 654
Query: 324 HCCQSWLKSCAFRFISEENA 343
L F +ENA
Sbjct: 655 KL----LLHLGQLFSEDENA 670
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V ++ IA SV ARGLD L LV+NFD P EDYVH C ++ K A I
Sbjct: 717 KQGVLSILIATSVAARGLDVPGLALVLNFDCPTHLEDYVHRCGRTGRAGNKGTAITLIEN 776
Query: 341 E-NAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLG 378
+A +VKA + S V + L+ +AD+F K G
Sbjct: 777 PGQERFAIHVVKALKESGAEVPEKLQEMADTFHEKAKAG 815
>gi|389631667|ref|XP_003713486.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Magnaporthe
oryzae 70-15]
gi|152032666|sp|A4RN46.1|PRP5_MAGO7 RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|351645819|gb|EHA53679.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Magnaporthe
oryzae 70-15]
Length = 1012
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 172/327 (52%), Gaps = 58/327 (17%)
Query: 15 EIDPLDAFMNDM-ECSF--AEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNR 71
E+DPLDAFM D+ E SF A P + LP +++ + D E +
Sbjct: 254 EVDPLDAFMADLTEPSFGPASKPVKTLSSAKVLPTPEAYFSDDDEFGASTKEGVDAKAIM 313
Query: 72 EIIKSKIK-----IDYQQL-----RKNFYTQAREITRMSPA----YRKQLD-LKIREKCA 116
+ + K IDY +L RKNF+ + E++ M+ A R +LD +K+ K
Sbjct: 314 AMAAKRKKKEIPTIDYSKLDIVPVRKNFWVEPYELSEMTEAEVAELRLELDGIKVSGKDV 373
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W GLT IL+ +KL ++ P AIQ A +I+SG D V + +TGSGKT+AFL
Sbjct: 374 PKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFL 433
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVR----------------------- 213
LPM RHI +Q P V ++ P+GL++ PT EL Q R
Sbjct: 434 LPMFRHIKDQEP-VKDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPPIK 492
Query: 214 ----------------RGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
GRMIDLL N ++ +L R TY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 493 DQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKI 552
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
N+RPDRQ VLFS T P ++ L +K
Sbjct: 553 FANVRPDRQTVLFSATMPKIMDALVKK 579
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ VC + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 675 KSGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTE 734
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
E A + KA E S V + L + +F KV G + +G GG L + +
Sbjct: 735 EQENCAIGIAKALEQSGQPVPEKLIEMRKAFREKVKAGKAKDQ-SGFGGKGLEKLDK 790
>gi|395815579|ref|XP_003781303.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Otolemur garnettii]
Length = 1031
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 163/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQWSSEEG-EGPIAVIMTPTRELTLQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|75061689|sp|Q5R6D8.1|DDX46_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|55731939|emb|CAH92678.1| hypothetical protein [Pongo abelii]
Length = 1032
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 163/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E L R+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALVRR 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|400601996|gb|EJP69621.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 1195
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 184/348 (52%), Gaps = 58/348 (16%)
Query: 18 PLDAFMNDMECSFAEHPN-NCFRLGRRLPAEDSHSASD---YELFMKRAK-------KKK 66
PLDAFM+D++ + P ++LP +++ + D YE+ A K
Sbjct: 437 PLDAFMDDLQHKEFKRPAAKKASTVKKLPEPEAYFSDDDYGYEVDQNDADASAVLAMTNK 496
Query: 67 RDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIK 121
R K KID Q +RKNF+ + E++ ++ R +LD +K+ K PKP++
Sbjct: 497 RKKKEIPTVDYSKIDIQPIRKNFWVEPVELSELNETEVAELRAELDGIKVNGKDVPKPVQ 556
Query: 122 TWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLR 181
W Q GLT + L+ + E P +IQ A ++SG D + + +TGSGKT+AFLLPM R
Sbjct: 557 KWAQCGLTRQTLDVIDNMGFEKPTSIQMQAIPALMSGRDVIGVAKTGSGKTMAFLLPMFR 616
Query: 182 HIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------------Q 211
HI +QPP+ + PVGL+M PT EL Q +
Sbjct: 617 HIKDQPPLKES-EGPVGLIMTPTRELATQIHRDCKPFLKMMGMRAVCAYGGAPIRDQIAE 675
Query: 212 VRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIR 262
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I N+R
Sbjct: 676 LKRGAEIIVCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFANMR 735
Query: 263 PDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
PD+Q +LFS T P ++ L +K V + +V R + KE+E ++
Sbjct: 736 PDKQTILFSATMPRIIDSLTKK--VLKSPVEITVGGRSVVAKEIEQIV 781
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + +A SV ARGLD K+L+LVIN+DAPN EDYVH ++ A FI+
Sbjct: 853 KKGVVPILVATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFITP 912
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E A + KA E SE V + L + + KV G + +G GG L+ +
Sbjct: 913 EQESCAPGIAKALEQSEQPVPERLNEMRKAHREKVKSGKAK-DTSGFGGKGLDRL 966
>gi|358379845|gb|EHK17524.1| hypothetical protein TRIVIDRAFT_112589, partial [Trichoderma virens
Gv29-8]
Length = 1252
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 184/354 (51%), Gaps = 66/354 (18%)
Query: 18 PLDAFMNDMECSFAEHPNNCFR----LGRRLPAEDSHSASDYEL-----------FMKRA 62
PLDAFM+D++ E NN + + ++ E S DY + A
Sbjct: 505 PLDAFMDDLQQ--IETVNNPLKKAPAIKKKQEPEAYFSDDDYAFNNEGDPEADAALLAIA 562
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAP 117
K+K+ + SKI D Q +RKNF+ + E++ +S A R +LD +K+ K P
Sbjct: 563 NKRKKKDIPSVDYSKI--DLQPIRKNFWVEPAELSMLSEADVTDLRLELDGIKVNGKDVP 620
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
KP++ W Q GLT + L+ L E P IQ A ++SG D V + +TGSGKT+AFLL
Sbjct: 621 KPVQKWAQCGLTRQTLDVIGSLGFEKPTPIQMQALPALMSGRDVVGVAKTGSGKTMAFLL 680
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------------- 210
PM RHI +Q P + D P+GL+M PT EL Q
Sbjct: 681 PMFRHIKDQEP-LKDTDGPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGGAPIRD 739
Query: 211 ---QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 740 QIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIF 799
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINF 312
N+RPDRQ +LFS T P ++ L +K V I +V R + KE+E ++
Sbjct: 800 ANMRPDRQTILFSATMPRLIDSLTKK--VLKSPIEITVGGRSVVAKEIEQIVEI 851
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 921 KKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTP 980
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S+ V + L + S KV G + +G GG L+ + + R
Sbjct: 981 EQENCAPGIAKALEQSDQPVPERLNEMRKSHREKVKSGKAK-DTSGFGGKGLDRLDQE-R 1038
Query: 401 RGKQLRK 407
+LR+
Sbjct: 1039 EAARLRE 1045
>gi|443729238|gb|ELU15222.1| hypothetical protein CAPTEDRAFT_167508 [Capitella teleta]
Length = 1000
Score = 204 bits (519), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 155/270 (57%), Gaps = 48/270 (17%)
Query: 59 MKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIRE 113
M+ KKK++ N+ KI Y+ RK FY + EI + P A R L+ +K+R
Sbjct: 274 MRSMNKKKKELNQ---VDHDKIYYRPFRKCFYVEVPEIANLPPEEVLALRTDLESIKVRG 330
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K P P+KTW Q G++ K+++ + N + P IQ+ A I+SG D + I TGSGKTL
Sbjct: 331 KGCPNPVKTWAQCGVSKKVMDCLKRNNFDKPTPIQSQAVPAIMSGRDIIGIARTGSGKTL 390
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
AFLLP+ RH+ +QP + G D P+G+++ PT EL Q
Sbjct: 391 AFLLPLFRHVLDQPEMEDG-DGPIGVILTPTRELAMQIAADARKFTRSLNLRVVCVYGGT 449
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
+++R GRMID+L N ++TNL R TY+VLDEADRMFDMGFEPQ+
Sbjct: 450 GISEQIAELKRGSEIIVCTPGRMIDMLAANSGRVTNLRRCTYIVLDEADRMFDMGFEPQV 509
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RI+ NIRPDRQ V+FS TFP ++E LAR+
Sbjct: 510 MRIIDNIRPDRQTVMFSATFPRQMEALARR 539
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFR 336
I+ K L +A SV ARGLD K+L LV+N+D PN YEDYVH C ++ A+
Sbjct: 628 IVDFKAGNVTLLVATSVAARGLDVKDLVLVVNYDCPNHYEDYVHRCGRTGRAGRHGYAYT 687
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHG-TGHGGVALNLM 395
F++ E A YA +++KA ELS V ++ + + + A+ +V +G G
Sbjct: 688 FMTYEQARYAGEIIKAMELSGANVTPEVVQLWEEYKAQTEADGKKVKSYSGFHGKGFKFD 747
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDEG 428
+ + +K Q G DS+D D G
Sbjct: 748 ETEAHLANERKKLQKAALGL----QDSDDEDAG 776
>gi|242767802|ref|XP_002341440.1| DEAD/DEAH box RNA helicase [Talaromyces stipitatus ATCC 10500]
gi|218724636|gb|EED24053.1| DEAD/DEAH box RNA helicase [Talaromyces stipitatus ATCC 10500]
Length = 1175
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 111/251 (44%), Positives = 151/251 (60%), Gaps = 45/251 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
K +Y+ RK+FYT+ ++ +M+ + R +LD +K+R PKPI W Q GL + L
Sbjct: 495 KTEYEPFRKSFYTEPLDLAQMTEEDVASLRLELDGIKVRGIDPPKPILKWSQCGLGVQTL 554
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ SKL +ENP +IQ+ A I+SG D + + +TGSGKT++FLLPM RHI +Q P +
Sbjct: 555 DVISKLGYENPTSIQSQALPAIMSGRDVIGVAKTGSGKTISFLLPMFRHIKDQHP-LENM 613
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ P+GL+M PT EL Q +++R
Sbjct: 614 EGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTP 673
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ NIRP++Q VLFS TF
Sbjct: 674 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPNKQTVLFSATF 733
Query: 275 PPRVEILARKT 285
P +E LARKT
Sbjct: 734 PRNMEALARKT 744
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 841 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 900
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+ Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L
Sbjct: 901 DQERYSVDIAKALKQSGQAVPEPVQKLVDSFLEKVKAGKEKASASGFGGKGL 952
>gi|326426645|gb|EGD72215.1| DEAD box ATP-dependent RNA helicase [Salpingoeca sp. ATCC 50818]
Length = 1054
Score = 204 bits (519), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 149/250 (59%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPIKTWRQTGLTTKIL 133
KI+Y+ RK+FY + EI RMS QL ++K R + P+PIKTW Q+GL ++L
Sbjct: 267 KIEYEDFRKSFYVEVPEIKRMSDQEVAQLRFELENIKTRGRDCPRPIKTWNQSGLPRRVL 326
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ L +++P IQA A +I+SG D + I +TGSGKTLAFLLPMLRH+ +Q V G+
Sbjct: 327 DVLRALKYDDPTPIQAQALPVIMSGRDMLGIAKTGSGKTLAFLLPMLRHVLDQRRVRQGE 386
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ L+++PT EL Q ++R
Sbjct: 387 GC-IALILSPTRELAVQTYTEAKKFTKHLDLRIACVYGGSDIADQIAHLKRSVEIIVCTP 445
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L N K+TN R+TY+VLDEADRMFDMGFEPQ+ RI+ NIRPDRQ V+FS TF
Sbjct: 446 GRMIDMLTVNRGKVTNPRRITYVVLDEADRMFDMGFEPQVMRILDNIRPDRQTVMFSATF 505
Query: 275 PPRVEILARK 284
P +E+LARK
Sbjct: 506 PRAMEVLARK 515
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 4/140 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
IA SV ARGLD K L+LV+N+D PN YEDYVH C ++ K AF F+++++ A
Sbjct: 616 IATSVAARGLDVKSLKLVVNYDCPNHYEDYVHRCGRTGRAGNKGTAFTFVTKDDKQLAGH 675
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQV-HGTGHGGVALNLMKRRIRRGKQLRK 407
++KA ELS V DLKAV + + ++ ++ G+G G + R KQ++
Sbjct: 676 VIKALELSSQEVPADLKAVWEEYKKEMKAKGKRIGAGSGFRGRGYKFSAEELIRRKQMKL 735
Query: 408 AQAKEYGFGEDKSDSEDVDE 427
K + G +D ++ ++
Sbjct: 736 LALKAHSEGNLDADYKEREQ 755
>gi|170039965|ref|XP_001847786.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863566|gb|EDS26949.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 942
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/249 (43%), Positives = 146/249 (58%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I+Y RK FY + EI +M+ AY+ +L+ + ++ K PKPI+TW G+T K E
Sbjct: 235 INYLPFRKVFYVEVPEIAKMTQTEVDAYKAELEGINVKGKGCPKPIRTWAHCGVTRKEFE 294
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P IQ A ++SG D + I +TGSGKTLAF+LPM RH+ +QPP+ +
Sbjct: 295 VLRKLGFEKPTPIQCQAIPAVMSGRDLIGIAKTGSGKTLAFILPMFRHVLDQPPLEEA-E 353
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ ++M+PT EL Q +++R G
Sbjct: 354 GPIAIIMSPTRELCMQIGKDIKKFAKSLNLRAVCVYGGTGISEQIAELKRGAEIIVCTPG 413
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+ NIRPDRQ V+FS TFP
Sbjct: 414 RMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIIDNIRPDRQTVMFSATFP 473
Query: 276 PRVEILARK 284
++E LAR+
Sbjct: 474 RQMEALARR 482
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 571 IIDFKQGRVKLLIATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGNKGFAWT 630
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSF 371
F++ E Y+ D+++A ELS + DDL+ + +++
Sbjct: 631 FLTHEQGRYSGDIIRALELSGGTIPDDLRQLWETY 665
>gi|343427053|emb|CBQ70581.1| related to RNA helicase [Sporisorium reilianum SRZ2]
Length = 1155
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/281 (41%), Positives = 150/281 (53%), Gaps = 46/281 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMSPAYRKQLDLK-----IREKCAPKPIKTWRQTGLTTKILE 134
+DY+ RK FY EI MS Q+ L+ +R K PKP+ W GL L+
Sbjct: 433 VDYEPFRKEFYNPPAEIQDMSEELANQIRLEMDAITVRGKDCPKPLTKWSHCGLPASCLD 492
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L + P IQ+ A I+SG D + + +TGSGKT+AFLLPM RHI +Q PV G +
Sbjct: 493 VIKRLGYAAPTPIQSQAIPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEVG-E 551
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
PVG+VM PT EL Q R G
Sbjct: 552 GPVGIVMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPG 611
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+IDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TFP
Sbjct: 612 RLIDLLTANSGRVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATFP 671
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPN 316
++E LARK + N + +V R + E+E ++ N
Sbjct: 672 KQMESLARKV-LKNKPLEITVGGRSVVAAEIEQIVEVRPEN 711
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 14/164 (8%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATDL 349
A SV ARGLD K+L+LVIN+D PN EDYVH ++ K F++ E YA D+
Sbjct: 786 ATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFVTPEQDRYARDI 845
Query: 350 VKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKAQ 409
+ A + S V +L+ +A +F K+ G + G+G GG L+ ++ R K L KAQ
Sbjct: 846 IAALKASAAHVPAELETMAAAFKEKLAAGKAKAAGSGFGGKGLDRLE--TDREKAL-KAQ 902
Query: 410 AKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASN 453
YG E +EG + GD S ++ AT AA+S+
Sbjct: 903 KSAYG--------EADEEGKAVNAGDASEANAKPGTATGAASSS 938
>gi|380491708|emb|CCF35128.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 1206
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/324 (37%), Positives = 165/324 (50%), Gaps = 55/324 (16%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKK--------- 65
++DPLDAFM D+ + A+ + + E SD E K K
Sbjct: 462 DVDPLDAFMADLSDAKAKPTGHKASTSSKKAQEPEAYFSDDEYAFKTEDGKDPNAVLAMA 521
Query: 66 -KRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLDL-----KIREKCAPKP 119
KR K K+D +RKNF+ + E+ ++ +L L K+ K PKP
Sbjct: 522 AKRKKKDIPTVDYSKLDLHPIRKNFWVEPAELAALTEEEANELRLELDGIKVSGKNIPKP 581
Query: 120 IKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM 179
++ W Q GLT + L+ + + + P +IQ A +I+SG D V + +TGSGKTLAFLLPM
Sbjct: 582 VQKWAQCGLTRRTLDVLADMGFDKPTSIQMQALPVIMSGRDVVGVAKTGSGKTLAFLLPM 641
Query: 180 LRHIWEQPPVVPGDDSPVGLVMAPTGEL---------------------------VRQQV 212
RHI +QPP + D P+GL+M PT EL +R Q+
Sbjct: 642 FRHIMDQPP-LKDTDGPIGLIMTPTRELAVQIHRDCKPFLKAMGLRSVCAYGGAPIRDQI 700
Query: 213 RR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQN 260
GRMIDLL N ++TNL RVTY VLDEADRMFDMGFEPQ+ +I N
Sbjct: 701 AELKRGAEIVVCTPGRMIDLLAANQGRVTNLRRVTYAVLDEADRMFDMGFEPQVMKIFAN 760
Query: 261 IRPDRQAVLFSPTFPPRVEILARK 284
IRPDRQ +LFS T P ++ L +K
Sbjct: 761 IRPDRQTILFSATMPRIIDSLTKK 784
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 9/175 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+NFD P+ EDYVH C ++ K A +I+E
Sbjct: 880 KKGIVPILIATSVAARGLDVKQLKLVVNFDCPSHSEDYVHRCGRTGRAGNKGTAVTYITE 939
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A+ + KA E S V + L+ + ++ KV G + +G GG L+ + R
Sbjct: 940 EQESCASAVAKALEQSGQPVPERLEEMRKAWKEKVKSGKAK-DTSGFGGKGLDRLDAE-R 997
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSK 455
+LR+ + + +D E +E KS S D +K++ I + + SK
Sbjct: 998 EAARLRERKTHKAEGEDDDVKEEKTEEDKAKS----SVTDIQSKVSAIVSRNTSK 1048
>gi|440463671|gb|ELQ33225.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Magnaporthe
oryzae Y34]
gi|440481910|gb|ELQ62446.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Magnaporthe
oryzae P131]
Length = 1230
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 172/327 (52%), Gaps = 58/327 (17%)
Query: 15 EIDPLDAFMNDM-ECSF--AEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNR 71
E+DPLDAFM D+ E SF A P + LP +++ + D E +
Sbjct: 472 EVDPLDAFMADLTEPSFGPASKPVKTLSSAKVLPTPEAYFSDDDEFGASTKEGVDAKAIM 531
Query: 72 EIIKSKIK-----IDYQQL-----RKNFYTQAREITRMSPA----YRKQLD-LKIREKCA 116
+ + K IDY +L RKNF+ + E++ M+ A R +LD +K+ K
Sbjct: 532 AMAAKRKKKEIPTIDYSKLDIVPVRKNFWVEPYELSEMTEAEVAELRLELDGIKVSGKDV 591
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W GLT IL+ +KL ++ P AIQ A +I+SG D V + +TGSGKT+AFL
Sbjct: 592 PKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFL 651
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVR----------------------- 213
LPM RHI +Q P V ++ P+GL++ PT EL Q R
Sbjct: 652 LPMFRHIKDQEP-VKDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPPIK 710
Query: 214 ----------------RGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
GRMIDLL N ++ +L R TY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 711 DQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKI 770
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
N+RPDRQ VLFS T P ++ L +K
Sbjct: 771 FANVRPDRQTVLFSATMPKIMDALVKK 797
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ VC + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 893 KSGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTE 952
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
E A + KA E S V + L + +F KV G + +G GG L + +
Sbjct: 953 EQENCAIGIAKALEQSGQPVPEKLIEMRKAFREKVKAGKAKDQ-SGFGGKGLEKLDK 1008
>gi|156053343|ref|XP_001592598.1| hypothetical protein SS1G_06839 [Sclerotinia sclerotiorum 1980]
gi|160419162|sp|A7ENE0.1|PRP5_SCLS1 RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|154704617|gb|EDO04356.1| hypothetical protein SS1G_06839 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1114
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 175/329 (53%), Gaps = 60/329 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRL---GRRLPAEDSHSASDYELFMKR---------- 61
EIDPLDAFM +M F+ +N + + P E D ++ +K
Sbjct: 359 EIDPLDAFMEEMGDPFSLPKSNTTFVKNNTKSQPQEPEALFGDDDVDLKALDADPDEILA 418
Query: 62 -AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKC 115
A K ++ K+ I + ++ RKNFYT+ E+ M+ A R +LD +K+ K
Sbjct: 419 IANKARKKKDIPTI-NYANLNLPPFRKNFYTEPAELVDMTEAEINDLRLELDGIKVAGKD 477
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP++ W Q GL K L+ KL ++ P +IQ A I+SG D + + +TGSGKT+AF
Sbjct: 478 VPKPVQKWSQCGLDVKSLDVIKKLGYDKPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAF 537
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +Q P + D P+GL+M PT EL Q
Sbjct: 538 LLPMFRHIRDQRP-LKNSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAII 596
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
++R GRMI+LL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +
Sbjct: 597 KDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMK 656
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+ NIRP+RQ +LFS T P ++ LA+KT
Sbjct: 657 VFNNIRPNRQTILFSATMPRIMDALAKKT 685
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+NFDAPN EDYVH ++ A FI+E
Sbjct: 780 KAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 839
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
E Y+ + KA E S V + L + S+ KV G + +G GG L
Sbjct: 840 EQEQYSVGIAKALEQSGQEVPERLNEMRKSYKDKVKSG-AKKESSGFGGKGL 890
>gi|345327882|ref|XP_001510706.2| PREDICTED: probable ATP-dependent RNA helicase DDX46, partial
[Ornithorhynchus anatinus]
Length = 973
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 163/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMS----PAY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS
Sbjct: 236 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPYRKNFYVEVPELAKMSLEEVNIM 295
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 296 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLRKHGYEKPTPIQTQAIPAIMSGRDLI 355
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 356 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKAL 414
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 415 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 474
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 475 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 515
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K AF FI+E
Sbjct: 608 KSGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGHAFTFITE 667
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 668 DQARYAGDIIKALELSGTAVPADLEKLWSDF 698
>gi|302414752|ref|XP_003005208.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
albo-atrum VaMs.102]
gi|261356277|gb|EEY18705.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
albo-atrum VaMs.102]
Length = 1145
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 170/323 (52%), Gaps = 63/323 (19%)
Query: 17 DPLDAFMNDME-----------CSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKK 65
DPLDAFM D++ A P + ++D + D + K
Sbjct: 406 DPLDAFMADLQETGSRPAPRAKTKPAPEPEAYY-------SDDDFAYRDEDPNAKNPLAV 458
Query: 66 KRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPI 120
KR K I KI+++ +RKNF+T+ E++ ++ A R +LD +K+ PKP+
Sbjct: 459 KRRKKEIPIVDYSKIEFEPVRKNFWTEPAELSALTEAETNDLRLELDGIKVSGNDVPKPV 518
Query: 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPML 180
+ W Q GLT + L+ + L +E P +IQ A ++SG D + + +TGSGKT+AFLLPM
Sbjct: 519 QKWAQCGLTRQTLDILADLGYERPTSIQMQALPCLMSGRDVIGVAKTGSGKTMAFLLPMF 578
Query: 181 RHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR-------------------------- 214
RHI +Q P+ GDD P+GL+M PT EL Q R
Sbjct: 579 RHIKDQKPIR-GDDGPIGLIMTPTRELAVQIHRDCKPFLKPMGMRAVCAYGGAPIKDQIA 637
Query: 215 -------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI 261
GRMIDLL N ++TNL RV+Y+VLDEADRMFDMGFEPQ+ +I N+
Sbjct: 638 DLKRGAEIVVCTPGRMIDLLGANQGRVTNLRRVSYVVLDEADRMFDMGFEPQVMKIFANM 697
Query: 262 RPDRQAVLFSPTFPPRVEILARK 284
RPDRQ +LFS T P ++ L +K
Sbjct: 698 RPDRQTILFSATMPRIIDSLTKK 720
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ K A +I+
Sbjct: 816 KKGIVPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNKGTAVTYITS 875
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E A + KA E S V + L + + KV G + +G GG L+ +
Sbjct: 876 EQENCAPGIAKALEQSGQPVPERLNEMRKAHRDKVKAGKAK-DTSGFGGKGLDRL 929
>gi|310790963|gb|EFQ26496.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 1112
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 124/325 (38%), Positives = 173/325 (53%), Gaps = 57/325 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPN--NCFRLGRRLPAEDSH-SASDYELFMKRAKK------- 64
++DPLDAFM D+ + A+ P +++ +++ S DY L + K
Sbjct: 368 DVDPLDAFMADLSDTKAQ-PTVLQASTSSKKVQEPEAYFSDDDYALKTEDGKDPNAVLAM 426
Query: 65 -KKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPK 118
KR K K+D +RKNF+ + E+ ++ R +LD +K+ K PK
Sbjct: 427 AAKRKKKDIPTVDYSKLDLHPIRKNFWVEPAELAALTEEEANELRLELDGIKVSGKNIPK 486
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P++ W Q GLT + L+ + + + P +IQ A +I+SG D V + +TGSGKTLAFLLP
Sbjct: 487 PVQKWAQCGLTRRTLDVLADMGFDKPTSIQMQALPVIMSGRDVVGVAKTGSGKTLAFLLP 546
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGEL---------------------------VRQQ 211
M RHI +QPP + D P+GL+M PT EL +R+Q
Sbjct: 547 MFRHIMDQPP-LKDTDGPIGLIMTPTRELAVQIHRDCKPFLKAMGLRSVCAYGGAPIREQ 605
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+ GRMIDLL N ++TNL RVTY VLDEADRMFDMGFEPQ+ +I
Sbjct: 606 IAELKRGAEIVVCTPGRMIDLLAANQGRVTNLRRVTYAVLDEADRMFDMGFEPQVMKIFA 665
Query: 260 NIRPDRQAVLFSPTFPPRVEILARK 284
NIRPDRQ +LFS T P ++ L +K
Sbjct: 666 NIRPDRQTILFSATMPRIIDSLTKK 690
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 89/175 (50%), Gaps = 9/175 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+D P+ EDYVH C ++ K A +I+E
Sbjct: 786 KKGIVPILIATSVAARGLDVKQLKLVVNYDCPSHSEDYVHRCGRTGRAGNKGTAVTYITE 845
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A+ + KA E S V + L+ + ++ KV G + +G GG L+ + R
Sbjct: 846 EQESCASAVAKALEQSGQPVPERLEEMRKAWKEKVKSGKAK-DSSGFGGKGLDRLDAE-R 903
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSK 455
+LR+ + + +D E +E KS S D +K++ I + + SK
Sbjct: 904 EAARLRERKTHKAEGEDDDVKEEKTEEDKVKS----SVTDIQSKVSAIVSRNTSK 954
>gi|325179839|emb|CCA14242.1| Os08g0159900 putative [Albugo laibachii Nc14]
Length = 1173
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/263 (41%), Positives = 148/263 (56%), Gaps = 44/263 (16%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
KI+Y +K Y REI ++ R +L++K+R K P+P+ W Q G + ++ +
Sbjct: 525 KIEYVPFQKKLYVTPREIKDLADDEVQELRSKLEIKVRGKNCPRPLLKWSQCGFSLRLQQ 584
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P AIQ A I++G D + I +TGSGKTLAFLLPM RHI QPP+ G +
Sbjct: 585 LIQKHGYVEPFAIQRQALPAIMAGRDVIGIAKTGSGKTLAFLLPMFRHILHQPPLKEG-E 643
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+GL+MAP EL +Q + +R G
Sbjct: 644 GPIGLIMAPARELAQQIYVEAKRFAKDLGLRATAVYGGSSVSEQIGNLKRGSEIVICTPG 703
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID+LC + K+ +L RV+Y+VLDEADRMFDMGFEPQIT+I+ NIRPDRQ +LFS TFP
Sbjct: 704 RMIDILCMSAGKVVSLQRVSYVVLDEADRMFDMGFEPQITKIIMNIRPDRQTLLFSATFP 763
Query: 276 PRVEILARKTNVCNLSIANSVRA 298
VE LARK + + I R+
Sbjct: 764 RAVETLARKVLLKPVEITVGARS 786
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K V L +A SV RGLD K+L LV+N+ PN EDYVH ++ K A+ FIS
Sbjct: 865 KRQVRTLMVATSVAGRGLDVKDLVLVVNYHCPNHLEDYVHRVGRTGRAGRKGTAYTFISP 924
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNL---MKR 397
+ YA DLV A E ++ V +L +A++F KV G + HG+G G K
Sbjct: 925 DEEEYAVDLVNALEHAKQTVPTELVTLAENFKEKVKRGEARYHGSGFKGKGFTFDESEKN 984
Query: 398 RIRRGKQLRKAQ 409
+R L+K Q
Sbjct: 985 ETQRTADLQKRQ 996
>gi|25395997|pir||H88637 protein F53H1.1 [imported] - Caenorhabditis elegans
Length = 646
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/361 (36%), Positives = 175/361 (48%), Gaps = 92/361 (25%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRL-----------------GRRLPAEDSHSASDYEL 57
E DPLDAFM ++ A+ N + G+ L ED+ +
Sbjct: 175 EEDPLDAFMKEIATKNAKKTGNSTQKASGIVTIVQEEKPEPEKGQVLENEDNMDMVIDDF 234
Query: 58 FMKRAKKKKRDKNREIIKS-KIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKI 111
++ A K R + ++ K+ Y++ +KNFY + EI RM+ A YR++LD + +
Sbjct: 235 DIETAAASLCHKGRMLAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITV 294
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGK 171
+ PKPIKTW Q G+ K++ K + P +IQA A I+SG D + I +TGSGK
Sbjct: 295 KGIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGK 354
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR----------------- 214
TLAFLLPM RHI +QP + G D P+ +++APT EL Q +
Sbjct: 355 TLAFLLPMFRHILDQPELEEG-DGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYG 413
Query: 215 ----------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252
GRMID+L N K+TNL RVTYLVLDEADRMFD GFEP
Sbjct: 414 GVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEP 473
Query: 253 Q-----------------------------ITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
Q I ++V NIRPD+Q VLFS TFP +E LAR
Sbjct: 474 QVGQKIRKSSIFRFLPKTCQIYVFEGGVRPIMKVVNNIRPDKQTVLFSATFPRHMEALAR 533
Query: 284 K 284
K
Sbjct: 534 K 534
>gi|169607499|ref|XP_001797169.1| hypothetical protein SNOG_06807 [Phaeosphaeria nodorum SN15]
gi|182676401|sp|Q0UN57.2|PRP5_PHANO RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|160701425|gb|EAT85458.2| hypothetical protein SNOG_06807 [Phaeosphaeria nodorum SN15]
Length = 1184
Score = 201 bits (512), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 195/381 (51%), Gaps = 67/381 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAED---SHSASDYELFMKRAKKKKRDKNR 71
++DPLDAFM D+ S + P+ G + +D +A + E + KK+ K
Sbjct: 433 DVDPLDAFMADL--SVPQQPSRAAPQGETMFNDDLEPEQTAVEGEDLLALRAAKKKKKEV 490
Query: 72 EIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQT 126
I + K++Y+ RK+FYT+ EIT+MS R +LD +K++ P+P+ W Q
Sbjct: 491 PTINHE-KVEYEPFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQM 549
Query: 127 GLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQ 186
GL + ++ F+++ + P AIQA A + SG D + + +TGSGKTLAF +PM+RH+ +Q
Sbjct: 550 GLLQQTMDVFTRVGYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQ 609
Query: 187 PPVVPGDDSPVGLVMAPTGELVRQQVRR-------------------------------- 214
P+ P D P+GL++APT EL Q V
Sbjct: 610 RPLKPA-DGPIGLILAPTRELSLQIVNELKPFLNASGITIKCAYGGQPISDQIAMIKRGG 668
Query: 215 --------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQ 266
GR+IDLL N ++ + R+TY+VLDEADRMFDMGFEPQ+ +I+ +IRPDRQ
Sbjct: 669 IHILCATAGRLIDLLQSNSGRVLSFRRITYVVLDEADRMFDMGFEPQVMKILASIRPDRQ 728
Query: 267 AVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYV---- 322
+LFS TFP + LARK + R++ E + I P YE +
Sbjct: 729 TILFSATFPKTMAALARKALDKPAEVIIGGRSKVAPEITQHITI---VPPSYEKKIAKLL 785
Query: 323 HHCCQSWLKSCAFRFISEENA 343
HH Q+ F +ENA
Sbjct: 786 HHLGQT--------FSDDENA 798
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + N+ IA SV ARGLD L LV NFD P EDYVH C ++ K A I
Sbjct: 845 KQGLLNILIATSVAARGLDVPGLALVYNFDCPTHLEDYVHRCGRTGRAGNKGLAVTLIEN 904
Query: 341 ENAI-YATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN------ 393
+A +VKA + S V DDL+A+A++F KV G + + G G L+
Sbjct: 905 PGQERFAVHIVKALKESGAEVPDDLQAMANAFHEKVKSGTEKYYNVGFKGKGLDELDASR 964
Query: 394 -LMKRRIRRGKQL 405
L K+R +R +L
Sbjct: 965 ALDKKREKRALKL 977
>gi|346979464|gb|EGY22916.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
dahliae VdLs.17]
Length = 1182
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 122/316 (38%), Positives = 169/316 (53%), Gaps = 51/316 (16%)
Query: 18 PLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKK-----KRDKNRE 72
PLDAFM D++ + P R E +S D+ + K KR K
Sbjct: 465 PLDAFMADLQET-GSRPAPKTRTKPAPEPEAYYSDDDFAYRDEDPNAKNPLAVKRRKKEI 523
Query: 73 IIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTG 127
I KI+++ +RKNF+T+ E++ ++ A R +LD +K+ PKP++ W Q G
Sbjct: 524 PIVDYSKIEFEPVRKNFWTEPAELSTLTEAETNDLRLELDGIKVSGNDVPKPVQKWAQCG 583
Query: 128 LTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQP 187
LT + L+ + L +E P +IQ A ++SG D + + +TGSGKT+AFLLPM RHI +Q
Sbjct: 584 LTRQTLDILADLGYERPTSIQMQALPCLMSGRDVIGVAKTGSGKTMAFLLPMFRHIKDQK 643
Query: 188 PVVPGDDSPVGLVMAPTGELVRQQVRR--------------------------------- 214
P+ GDD P+GL+M PT EL Q R
Sbjct: 644 PIR-GDDGPIGLIMTPTRELAVQIHRDCKPFLKPMGMRAVCAYGGAPIKDQIADLKRGAE 702
Query: 215 ------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAV 268
GRMIDLL N ++TNL RV+Y+VLDEADRMFDMGFEPQ+ +I N+RPDRQ +
Sbjct: 703 IVVCTPGRMIDLLGANQGRVTNLRRVSYVVLDEADRMFDMGFEPQVMKIFANMRPDRQTI 762
Query: 269 LFSPTFPPRVEILARK 284
LFS T P ++ L +K
Sbjct: 763 LFSATMPRIIDSLTKK 778
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ K A +I+
Sbjct: 874 KKGIVPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNKGTAVTYITS 933
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E A + KA E S V + L + + KV G + +G GG L+ +
Sbjct: 934 EQENCAPGIAKALEQSGQPVPERLNEMRKAHRDKVKAGKAK-DTSGFGGKGLDRL 987
>gi|66819701|ref|XP_643509.1| hypothetical protein DDB_G0275443 [Dictyostelium discoideum AX4]
gi|74897315|sp|Q553B1.1|DDX46_DICDI RecName: Full=ATP-dependent RNA helicase ddx46; AltName:
Full=ATP-dependent RNA helicase helB1; AltName:
Full=DEAD box protein 46
gi|60471516|gb|EAL69472.1| hypothetical protein DDB_G0275443 [Dictyostelium discoideum AX4]
Length = 1151
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 142/248 (57%), Gaps = 44/248 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I Y + +KNFY + + M+ +R +L +KI K PKPI++W Q GLT K+
Sbjct: 464 IKYAEFQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLL 523
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E P +IQA I++G D + I TGSGKTLAFLLPM RHI QP PG +
Sbjct: 524 LKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPG-EG 582
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
+ L+M+PT EL Q +++R GR
Sbjct: 583 MIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGR 642
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+LC N +ITNL RVT+LVLDEADRMFDMGF PQI IV +IRPDRQ ++FS TFPP
Sbjct: 643 MIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPP 702
Query: 277 RVEILARK 284
+VE +A+K
Sbjct: 703 KVENVAKK 710
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA + +RGLD K+L LV+NFD P+ EDYVH ++ + A+ FI+
Sbjct: 803 KNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITP 862
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAK------VNLGLGQVHGTGHGGVALNL 394
+ +++ ++KA E S V D+L+ + D++ K V L G GH A
Sbjct: 863 DEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEGKDVLLAPTGFTGRGHKFDAAEE 922
Query: 395 MKRRIRRGKQLRKA 408
K+ I R KQ RKA
Sbjct: 923 DKKNIER-KQQRKA 935
>gi|121701983|ref|XP_001269256.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143359917|sp|A1CQA9.1|PRP5_ASPCL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
gi|119397399|gb|EAW07830.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 1192
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 148/250 (59%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
K++Y+ RK FYT+ + +M+ + R +LD +K+R PKP++ W Q GL + L
Sbjct: 510 KVEYEPFRKKFYTEPSNLAQMTDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQAL 569
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +L +E+P +IQ+ A I+SG D + + +TGSGKT+AFL+PM RHI +Q P +
Sbjct: 570 DVIERLGYESPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRP-LDNM 628
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ P+GL+M PT EL Q ++R
Sbjct: 629 EGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIVVCTP 688
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TF
Sbjct: 689 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATF 748
Query: 275 PPRVEILARK 284
P +E LARK
Sbjct: 749 PRNMEALARK 758
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 856 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 915
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 916 EQERYSVDIAKALKQSGQQVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERL 970
>gi|322708721|gb|EFZ00298.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Metarhizium
anisopliae ARSEF 23]
Length = 1245
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 178/345 (51%), Gaps = 55/345 (15%)
Query: 18 PLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAK--------KKKRDK 69
PLDAFM D++ + + P ++ +++ + D F K KR K
Sbjct: 502 PLDAFMADLKQTETKGPVKPIIAAKKAQEPEAYFSDDEYNFDSEQKGDPDILAIANKRKK 561
Query: 70 NREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWR 124
KID +RKNF+ + E++ ++ R +LD +K+ K PKP++ W
Sbjct: 562 KDIPTVDYSKIDLVPVRKNFWVEPAELSALTEEELADLRLELDGIKVNGKDVPKPVQKWA 621
Query: 125 QTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIW 184
Q GLT + L+ L +E P IQ A ++SG D V + +TGSGKT+AFLLPM RHI
Sbjct: 622 QCGLTRQTLDVIDNLGYEKPTTIQMQAIPTLMSGRDVVGVAKTGSGKTVAFLLPMFRHIM 681
Query: 185 EQPPVVPGDDSPVGLVMAPTGELVRQ------------------------------QVRR 214
+QPP + D PVGL+M PT EL Q +++R
Sbjct: 682 DQPP-IKDTDGPVGLIMTPTRELATQIHRDCKPFLKSMGLRAVCAYGGAPIRDQIAELKR 740
Query: 215 ---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDR 265
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I +RPD+
Sbjct: 741 GAEIIVCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFAGMRPDK 800
Query: 266 QAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
Q +LFS T P ++ L +K V + +V R + KE+E ++
Sbjct: 801 QTILFSATMPRIIDSLTKK--VLKSPVEITVGGRSVVAKEIEQIV 843
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V L +A SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 915 KKGVVPLLVATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTP 974
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ A + KA E SE V + L + + KV G + +G GG L+ +
Sbjct: 975 DQENCAPGIAKALEQSEQPVPERLNEMRKAHREKVKSGKAK-DSSGFGGKGLDRL 1028
>gi|322695045|gb|EFY86860.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Metarhizium
acridum CQMa 102]
Length = 1161
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 124/345 (35%), Positives = 178/345 (51%), Gaps = 55/345 (15%)
Query: 18 PLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAK--------KKKRDK 69
PLDAFM D++ + + P ++ +++ + D F K KR K
Sbjct: 418 PLDAFMADLKQTETKKPVKPVIAAKKAQEPEAYFSDDEYNFDSEQKGDSDILAIANKRKK 477
Query: 70 NREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWR 124
KID +RKNF+ + E++ ++ R +LD +K+ K PKP++ W
Sbjct: 478 KDIPTVDYSKIDLVPVRKNFWVEPAELSALTEEELADLRLELDGIKVNGKDVPKPVQKWA 537
Query: 125 QTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIW 184
Q GLT + L+ L +E P IQ A ++SG D V + +TGSGKT+AFLLPM RHI
Sbjct: 538 QCGLTRQTLDVIDNLGYEKPTTIQMQAIPTLMSGRDVVGVAKTGSGKTVAFLLPMFRHIM 597
Query: 185 EQPPVVPGDDSPVGLVMAPTGELVRQ------------------------------QVRR 214
+QPP + D P+GL+M PT EL Q +++R
Sbjct: 598 DQPP-IKDTDGPIGLIMTPTRELATQIHRDCKPFLKSMGLRAVCAYGGAPIRDQIAELKR 656
Query: 215 ---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDR 265
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I +RPD+
Sbjct: 657 GAEIIVCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIFAGMRPDK 716
Query: 266 QAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
Q +LFS T P ++ L +K V + +V R + KE+E ++
Sbjct: 717 QTILFSATMPRIIDSLTKK--VLKSPVEITVGGRSVVAKEIEQIV 759
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V L +A SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 831 KKGVVPLLVATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTP 890
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ A + KA E SE V + L + + KV G + +G GG L+ +
Sbjct: 891 DQENCAPGIAKALEQSEQPVPERLNEMRKAHREKVKSGKAK-DSSGFGGKGLDRL 944
>gi|350536495|ref|NP_001233197.1| probable ATP-dependent RNA helicase DDX46 [Sus scrofa]
gi|336092215|gb|AEI00731.1| DEAD box polypeptide 46 [Sus scrofa]
Length = 1032
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 163/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVLELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+ Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGISVKGKGCPKPIKSGVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLM 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTMAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|308454438|ref|XP_003089847.1| hypothetical protein CRE_06212 [Caenorhabditis remanei]
gi|308268147|gb|EFP12100.1| hypothetical protein CRE_06212 [Caenorhabditis remanei]
Length = 820
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 135/238 (56%), Gaps = 45/238 (18%)
Query: 91 TQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPV 145
T EI RMS A YR +LD + ++ PKPIKTW Q G+ K++ K + P
Sbjct: 111 TTTEEIKRMSKAEVKAYRDELDSITVKGIDVPKPIKTWAQCGVNLKMMNVLKKYEYTKPT 170
Query: 146 AIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTG 205
+IQA A I+SG D + I +TGSGKTLAFLLPM RHI +QP + G D P+ +++APT
Sbjct: 171 SIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEG-DGPIAVILAPTR 229
Query: 206 ELVRQQVRR---------------------------------------GRMIDLLCKNGV 226
EL Q + GRMID+L N
Sbjct: 230 ELAMQTYKEANKFAKVLGLRVACTYGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSG 289
Query: 227 KITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
K+TNL RVTYLVLDEADRMFD GFEPQI ++V NIRPD+Q VLFS TFP +E LARK
Sbjct: 290 KVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTVLFSATFPRHMEALARK 347
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 63/123 (51%), Gaps = 18/123 (14%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFI-S 339
KT V + +A SV ARGLD K L LV+N+D PN YEDYVH ++ K A+ F+
Sbjct: 441 KTGVIKVLVATSVAARGLDVKNLILVVNYDCPNHYEDYVHRVGRTGRAGKKGYAYTFVLP 500
Query: 340 EENAIY---------ATDLVKAFELSELVVRDDLKAVADSFIAKV-----NLGLGQVHGT 385
E+ + Y A ++ +AFE + DLKA+ + F ++ + LG
Sbjct: 501 EQISQYGSQNYQEKMAGEICRAFETAGCKPPQDLKAMFERFKKEMAAEGKEVKLGGKGFE 560
Query: 386 GHG 388
GHG
Sbjct: 561 GHG 563
>gi|71005310|ref|XP_757321.1| hypothetical protein UM01174.1 [Ustilago maydis 521]
gi|74703958|sp|Q4PFD9.1|PRP5_USTMA RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|46096725|gb|EAK81958.1| hypothetical protein UM01174.1 [Ustilago maydis 521]
Length = 1156
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 148/275 (53%), Gaps = 46/275 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMSPAYRKQLDLK-----IREKCAPKPIKTWRQTGLTTKILE 134
IDY+ K FY EI MS Q+ L+ +R + PKP+ W GL L+
Sbjct: 430 IDYEPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLD 489
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L + P IQ+ A I+SG D + + +TGSGKT+AFLLPM RHI +Q PV P +
Sbjct: 490 VIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSE- 548
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
PVG++M PT EL Q R G
Sbjct: 549 GPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPG 608
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+IDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TFP
Sbjct: 609 RLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDRQTVLFSATFP 668
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
++E LARK + N + +V R + E+E ++
Sbjct: 669 KQMESLARKV-LKNKPLEITVGGRSVVAAEIEQIV 702
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATDL 349
A SV ARGLD K+L+LVIN+D PN EDYVH ++ K FI+ E YA D+
Sbjct: 783 ATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDI 842
Query: 350 VKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKAQ 409
+ A + S V +L+A+A SF K+ G + G+G GG L+ + + R K L KAQ
Sbjct: 843 IAALKASAAHVPPELEAMAASFKEKLAAGKAKAAGSGFGGKGLDRFE--LDREKTL-KAQ 899
Query: 410 AKEYG 414
YG
Sbjct: 900 KSAYG 904
>gi|388851757|emb|CCF54563.1| related to RNA helicase [Ustilago hordei]
Length = 1171
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/281 (41%), Positives = 149/281 (53%), Gaps = 46/281 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMSPAYRKQLDLK-----IREKCAPKPIKTWRQTGLTTKILE 134
+DY+ K FY EI MS Q+ L+ +R K PKP+ W GL L+
Sbjct: 448 VDYEPFCKVFYHPPAEIEDMSEELANQIRLEMDAIAVRGKDCPKPLIKWSHCGLPASALD 507
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL + P IQ+ A I+SG D + + +TGSGKT+AFLLPM RHI +Q PV P +
Sbjct: 508 VIKKLGYAAPTPIQSQAVPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSE- 566
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+G++M PT EL Q R G
Sbjct: 567 GPIGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPG 626
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+IDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TFP
Sbjct: 627 RLIDLLTANSGRVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATFP 686
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPN 316
++E LARK + N + +V R + E+E ++ N
Sbjct: 687 KQMESLARKV-LKNKPLEITVGGRSVVAAEIEQIVEVRPEN 726
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 88/164 (53%), Gaps = 14/164 (8%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATDL 349
A SV ARGLD K+L+LVIN+D PN EDYVH ++ K FI+ E YA D+
Sbjct: 801 ATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDI 860
Query: 350 VKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKAQ 409
+ A + S V +L+A+A+SF K+ G + G+G GG L+ ++ R K L KAQ
Sbjct: 861 IAALKASSAHVPAELEAMAESFKEKLAAGKVKAAGSGFGGKGLDRLE--TDREKVL-KAQ 917
Query: 410 AKEYGFGEDK--------SDSEDVDEGTRKSGGDISHQDSIAKI 445
YG +++ +S D T +GG S +D ++K+
Sbjct: 918 KSAYGEADEEGKAANGGAGESTDATGKTGAAGGSSSSEDQLSKL 961
>gi|403342187|gb|EJY70406.1| hypothetical protein OXYTRI_08845 [Oxytricha trifallax]
Length = 1227
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 160/273 (58%), Gaps = 46/273 (16%)
Query: 56 ELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRK-QLDLK 110
E ++++ KK+ +N +++ + Y +L KN Y + +EI+RM+ +RK D+K
Sbjct: 515 ESYLEKEKKRAERQNLKLVNHDNET-YDKLNKNLYIETKEISRMTDKEVQEFRKLNGDIK 573
Query: 111 IREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSG 170
+R PKP+ +W Q GL +LE + N + P IQ + I+SG D + I ETGSG
Sbjct: 574 VRGLKCPKPVSSWYQCGLPDGVLEVIERKNFQKPFPIQCQSLPAIMSGRDVIGIAETGSG 633
Query: 171 KTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------- 210
KTLA++LPM+RHI +Q P+ G + +GL+MAPT EL Q
Sbjct: 634 KTLAYVLPMIRHIRDQRPLEEG-EGMIGLIMAPTRELAFQIYKESKAFAKACGIRVVCVY 692
Query: 211 ----------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFE 251
+++R GRMID+L + KITNL R +Y+VLDEADRM DMGFE
Sbjct: 693 GGANVAGQLSELKRGAEIVVCTPGRMIDVLSTSNGKITNLKRCSYIVLDEADRMLDMGFE 752
Query: 252 PQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
PQI+R++QN+RPD+Q V+FS TFP ++E LA+K
Sbjct: 753 PQISRVMQNVRPDKQCVMFSATFPRQIENLAKK 785
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K V N+ +A SV ARGLD K + LVIN+ PN EDYVH ++ K A+ FI+
Sbjct: 878 KDRVRNIMVATSVCARGLDIKHMRLVINYMCPNHTEDYVHRVGRTGRAGTKGTAYTFITP 937
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGT--GHGGVALNLMKRR 398
+ YATDL++A E S V ++LK + +S+ K+ G + T G+ G +
Sbjct: 938 DECQYATDLIRALENSGNQVPEELKKLEESYQKKIEEGEIEKKKTNVGYVGKGFEFNDKE 997
Query: 399 IRRGKQLRKAQAKEYGF 415
+ K RK +K YG
Sbjct: 998 KNKVKDFRKELSKAYGM 1014
>gi|355750194|gb|EHH54532.1| hypothetical protein EGM_15393, partial [Macaca fascicularis]
Length = 1029
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/281 (39%), Positives = 161/281 (57%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y++ RKNFY + E+ +MS +
Sbjct: 290 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYERFRKNFYVEVPELAKMSQEEVNVF 349
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 350 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 409
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI Q + G + P+ ++M PT EL Q
Sbjct: 410 GIAKTGSGKTIAFLLPMFRHIMGQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 468
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 469 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 528
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+ PDRQ V+FS TFP +E L +
Sbjct: 529 RMFDMGFEPQVMRIVDNVHPDRQTVMFSATFPRAMEALTSR 569
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 662 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 721
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 722 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 752
>gi|449305030|gb|EMD01037.1| hypothetical protein BAUCODRAFT_82013 [Baudoinia compniacensis UAMH
10762]
Length = 853
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/336 (38%), Positives = 173/336 (51%), Gaps = 63/336 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSH-----SASDYELFMKRAKKKKRD- 68
E DPLDAFM D+E A F +R S + SD E + + D
Sbjct: 82 EDDPLDAFMKDLEVPAAP----GFITAKRYTTSRSKEPQVFNNSDDEADLDAVGQNTDDI 137
Query: 69 -------KNREI-IKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKC 115
K +EI KI+Y+ RK FY ++ E++ ++ R +LD + ++
Sbjct: 138 LAIAAKRKKKEIPTVDHSKIEYEPFRKAFYNESVELSDLTEDDTDMLRAELDNIVVKGGN 197
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
APKPI+ W Q G +IL+ E P +QA I+SG D++ I TGSGKT+A+
Sbjct: 198 APKPIQQWSQGGFGAQILDVIRDRKFEKPTPVQAQTLPAIMSGRDTIGIARTGSGKTVAY 257
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +Q P + + P+ L+MAPT EL Q
Sbjct: 258 LLPMFRHIKDQRP-LDNLEGPIALIMAPTRELATQIHHECKPYTKALNLRAVCAYGGAPI 316
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
++R GR+IDLL N ++TNL RVTY+VLDEADRMFDMGFEPQIT+
Sbjct: 317 KDQIADLKRGAEILVCTPGRLIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQITK 376
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSI 292
I+ NIRPD+Q VLFS TFP ++E LARK L I
Sbjct: 377 ILGNIRPDKQTVLFSATFPEKLEKLARKVLTKGLVI 412
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
IA SV ARGLD K+L+LV+N+D+P EDYVH C ++ A FI+ E +A+
Sbjct: 508 IATSVAARGLDVKQLKLVVNYDSPTHKEDYVHRCGRTGRAGNTGTAVTFITPEEDRFASA 567
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGG 389
L+ A S V + L +A F KV G + G+G GG
Sbjct: 568 LIAALTDSNQDVPEALTKLAQDFEEKVKAGQAKKMGSGFGG 608
>gi|198435916|ref|XP_002130991.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 46
[Ciona intestinalis]
Length = 1150
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/271 (41%), Positives = 151/271 (55%), Gaps = 45/271 (16%)
Query: 58 FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREI----TRMSPAYRKQLD-LKIR 112
F K +++ K E KI Y+ RKNFY + E+ T A R ++ +KIR
Sbjct: 422 FSKFQTNRQQPKKLETTIDHSKIPYENFRKNFYVEVPELAALTTEQVEAMRFDMENIKIR 481
Query: 113 EKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKT 172
K PKPI++W Q G++ K+L K N+E P IQA A I+SG D + I +TGSGKT
Sbjct: 482 GKSCPKPIQSWVQAGVSYKMLNALKKANYEKPTVIQAQAIPAIMSGHDLIGIAKTGSGKT 541
Query: 173 LAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------- 210
+AFLLPMLR I +Q P + + P+ ++M PT EL Q
Sbjct: 542 VAFLLPMLRQIMDQRP-LEDTEGPIAVIMTPTRELALQITKECKKFTKSLKLHVVCVYGG 600
Query: 211 --------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQ 253
+++R GRMID+L N ++TNL R TYLVLDEADRMFDMGFEPQ
Sbjct: 601 TGISEQIAELKRGAEIIVCTPGRMIDMLTVNNGRVTNLRRCTYLVLDEADRMFDMGFEPQ 660
Query: 254 ITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+ ++ + RPDRQ VLFS TFP ++E LAR+
Sbjct: 661 VMHVINSCRPDRQTVLFSATFPRQMEALARR 691
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V L IA SV ARGLD K L LV+NF+ PN YEDYVH C ++ K A+ FI++
Sbjct: 784 KRGVNQLLIATSVAARGLDVKNLILVVNFNCPNHYEDYVHRCGRTGRAGNKGFAYTFITQ 843
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA +++KA ELS V DL+ + + F
Sbjct: 844 DQARYAGEIIKALELSLTKVPPDLEMLWNQF 874
>gi|212542881|ref|XP_002151595.1| DEAD/DEAH box RNA helicase [Talaromyces marneffei ATCC 18224]
gi|210066502|gb|EEA20595.1| DEAD/DEAH box RNA helicase [Talaromyces marneffei ATCC 18224]
Length = 1207
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 110/258 (42%), Positives = 153/258 (59%), Gaps = 45/258 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
K +Y+ RK+FYT+ ++ +M+ + R +LD +K+R PKPI W Q GL + L
Sbjct: 528 KAEYEPFRKSFYTEPLDLAQMTEEEVASLRLELDGIKVRGVDPPKPILKWSQCGLGVQTL 587
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ SKL +E+P +IQ+ A I+SG D + + +TGSGKT++FLLPM RHI +Q P +
Sbjct: 588 DVISKLGYEHPTSIQSQALPAIMSGRDVIGVAKTGSGKTVSFLLPMFRHIKDQRP-LENM 646
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ P+ L+M PT EL Q +++R
Sbjct: 647 EGPISLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTP 706
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ NIRP++Q VLFS TF
Sbjct: 707 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMTNIRPNKQTVLFSATF 766
Query: 275 PPRVEILARKTNVCNLSI 292
P +E LARKT + + I
Sbjct: 767 PRNMEALARKTLIKPVEI 784
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 874 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 933
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 934 DQERYSVDIAKALKQSGQAVPEPVQKLVDSFLEKVKAGKEKASASGFGGKGLERL 988
>gi|402078084|gb|EJT73433.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1218
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/339 (38%), Positives = 175/339 (51%), Gaps = 74/339 (21%)
Query: 11 VVQIEIDPLDAFMNDMECSFAEHPNNCFRL-GRRLPA---------EDSHSASDYE---- 56
V+ ++DPLDAFM D+E + + G PA +D ++ E
Sbjct: 461 TVEDDVDPLDAFMADLEEPATSARSKLAKTAGGSKPAPIPEAYFSDDDDFASGAAEDPDA 520
Query: 57 --LFMKRAKKKKRDKNREIIKSKIKIDYQQL-----RKNFYTQAREITRMSPA----YRK 105
L AK+KK+ EI K IDY +L RKNF+ + E++ MS A R
Sbjct: 521 KTLLALTAKRKKK----EIPK----IDYSKLDLGVIRKNFWVEPSELSEMSEAEVAELRL 572
Query: 106 QLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAI 164
+LD +K+ K PKP++ W GLT IL+ KL ++ P AIQ A +I+SG D V +
Sbjct: 573 ELDGIKVSGKDVPKPVQKWSHCGLTRPILDVIDKLAYDKPTAIQMQALPVIMSGRDMVGV 632
Query: 165 TETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVR----------- 213
+TGSGKT+AFLLPM RHI +Q PV + P+GL++ PT EL Q R
Sbjct: 633 AKTGSGKTMAFLLPMFRHIKDQKPVKDA-EGPIGLILTPTRELAVQIFRDCKPFLKALGL 691
Query: 214 ----------------------------RGRMIDLLCKNGVKITNLTRVTYLVLDEADRM 245
GRMIDLL N ++ +L R TY+VLDEADRM
Sbjct: 692 RAVCAYGGPPIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRM 751
Query: 246 FDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
FDMGFEPQ+T+I+ N RPD Q VLFS T P ++ L +K
Sbjct: 752 FDMGFEPQVTKILGNARPDLQTVLFSATMPKIMDALVKK 790
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ VC + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A FI+E
Sbjct: 886 KSGVCPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 945
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + +A E S V + L + +F K+ G + +G GG L + +
Sbjct: 946 EQENCAMGIARALEQSGQPVPERLVEMRKAFKDKIKAGQAKDQ-SGFGGKGLERLDKERE 1004
Query: 401 ----RGKQLRKAQAKEYGFGEDKSDSED 424
R ++ KA+ ++ E+K+ +D
Sbjct: 1005 AARNRERKTHKAEGEDEDVPEEKTGKDD 1032
>gi|260802690|ref|XP_002596225.1| hypothetical protein BRAFLDRAFT_276047 [Branchiostoma floridae]
gi|229281479|gb|EEN52237.1| hypothetical protein BRAFLDRAFT_276047 [Branchiostoma floridae]
Length = 924
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 146/250 (58%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQL-DLKIREKCAPKPIKTWRQTGLTTKIL 133
+I+Y RK+FY + E+ ++S A R ++ D++++ K PKP+ W Q+G++ K+L
Sbjct: 190 QIEYDPFRKDFYVEVPELQKLSEDEVKAMRAEMEDVRVKGKGCPKPVLHWVQSGVSKKVL 249
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K E P IQA A +I+SG D + I +TGSGKTLAFL+PM RHI +Q P +
Sbjct: 250 ACLKKHGFEKPTPIQAQAIPVIMSGRDMIGIAKTGSGKTLAFLIPMFRHILDQRP-LEDT 308
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ P+G++M PT EL Q +++R
Sbjct: 309 EGPIGVIMTPTRELALQITKECKKFTRHMNLKVVCVYGGTGISEQIAELKRGAEIIICTP 368
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+L N ++TNL R TYLVLDEADRMFDMGFEPQ+ IV ++RPDRQ V+FS TF
Sbjct: 369 GRMIDMLAANNGRVTNLRRCTYLVLDEADRMFDMGFEPQVMHIVNSVRPDRQTVMFSATF 428
Query: 275 PPRVEILARK 284
P +E LARK
Sbjct: 429 PRNMEALARK 438
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ L +A SV ARGLD K+L LVIN+D PN YEDYVH ++ K A+ FI+E
Sbjct: 531 KSGNIRLLVATSVAARGLDVKQLILVINYDCPNHYEDYVHRVGRTGRAGNKGYAYTFITE 590
Query: 341 ENAIYATDLVKAFELSE 357
+ YA D++KA ELSE
Sbjct: 591 DQGRYAGDVIKALELSE 607
>gi|294658221|ref|XP_002770738.1| DEHA2F04466p [Debaryomyces hansenii CBS767]
gi|218511822|sp|Q6BML1.2|PRP5_DEBHA RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|202952969|emb|CAR66268.1| DEHA2F04466p [Debaryomyces hansenii CBS767]
Length = 913
Score = 197 bits (502), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 150/251 (59%), Gaps = 46/251 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+I Y RK+FYT+ EI+++ R +LD +K+R +PI W Q GL + I+
Sbjct: 269 QIQYHPFRKDFYTEPTEISKLPEEEVANLRLKLDGIKVRGVNCTRPIIRWSQLGLPSTIM 328
Query: 134 ETF-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
+LN+ +P +IQA A I+SG D + + +TGSGKTL+F+LP+LRHI +QPP+ G
Sbjct: 329 SIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLKKG 388
Query: 193 DDSPVGLVMAPTGELVRQ------------------------------QVRR-------- 214
D P+GL+M PT EL Q ++++
Sbjct: 389 -DGPIGLIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGT 447
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+IDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+T++ +RPDRQ VLFS T
Sbjct: 448 PGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRVRPDRQTVLFSAT 507
Query: 274 FPPRVEILARK 284
FP ++E+LA+K
Sbjct: 508 FPRKMELLAKK 518
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAI 344
N+ IA S+ ARGLD K L LVIN++A + EDYVH ++ K A F+S +
Sbjct: 627 VNILIATSIAARGLDVKGLNLVINYEAASHMEDYVHRVGRTGRAGRKGTAITFVSSKQGR 686
Query: 345 YATDLVKAFELSELVVRDDLK----AVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
TDLVKA LS+ V D++ ++ F+ V G + + G G L+ + + IR
Sbjct: 687 AITDLVKAMRLSK-VSEDEINPRLIEISTKFLEGVKSG-KEKYNFGFSGKGLDNL-QEIR 743
Query: 401 RGKQLRKAQAKEYGFGEDKS 420
R + K YG D S
Sbjct: 744 ESN--RDLERKVYGEENDSS 761
>gi|321252102|ref|XP_003192288.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|317458756|gb|ADV20501.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
Length = 1063
Score = 197 bits (502), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 178/347 (51%), Gaps = 61/347 (17%)
Query: 17 DPLDAFMNDMECSFAE-HPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREIIK 75
DPLDAFM D E + + R+G R+ AED D +++ K + + +
Sbjct: 274 DPLDAFMRDNVQQVVEVNKADAKRMGLRI-AEDGSDDEDRGQVVEKDKLAEAEALLQQAA 332
Query: 76 SKI-----------KIDYQQLRKNFYTQAREITRM----SPAYRKQLD-LKIREKCAPKP 119
+K KIDY+ RK FY E+ M + R ++D +KIR + APKP
Sbjct: 333 AKSRKKDLPPPDHSKIDYEPFRKAFYVPPVEVLEMDEEEAELMRLEMDGIKIRGQDAPKP 392
Query: 120 IKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM 179
++ W GL L+ E P +IQA A I+SG D + I +TGSGKT+AFLLPM
Sbjct: 393 VRNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPM 452
Query: 180 LRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR------------------------- 214
LRH+ +Q PV G + P+ +V++PT EL Q +
Sbjct: 453 LRHVRDQRPVS-GSEGPIAVVLSPTRELATQIYKECQPFLKVLNIRASCCVGGSSISEDI 511
Query: 215 --------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQN 260
GRMIDLL N ++TN+ R TY+V+DEADRMFDMGFEPQ+ +I+ N
Sbjct: 512 AAMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINN 571
Query: 261 IRPDRQAVLFSPTFPPRVEILARKTNVCNLSI---ANSVRARGLDEK 304
+RP+ Q VLFS TFP +E LARK V L I SV A +D++
Sbjct: 572 VRPNAQKVLFSATFPKTMESLARKILVKPLEITVGGRSVVAPEIDQR 618
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A SV ARGLD KEL+LVIN+DAPN EDYVH ++ K FI+ E ++ D
Sbjct: 702 VATSVAARGLDVKELKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVD 761
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+V+A E S+ + DDLK ++DSF+ K+ G + G+G+ G L
Sbjct: 762 IVRALEASKAFIPDDLKQMSDSFLGKIKSGKARAAGSGYSGKGL 805
>gi|255940232|ref|XP_002560885.1| Pc16g05440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585508|emb|CAP93214.1| Pc16g05440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1162
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 134/381 (35%), Positives = 188/381 (49%), Gaps = 77/381 (20%)
Query: 15 EIDPLDAFMNDME----------CSFA-----EHPNNCFRLGRRLPAEDSHSASDYELFM 59
E+DPLDAFM ++ +FA + P F + ++
Sbjct: 396 EVDPLDAFMAGLQDSTPPERTTGATFAKKKTNQQPEAMFGDDEDVDVTAVGDEKAEDVLA 455
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREK 114
A KKK+ + +I KI+Y+ RK FYT+ + M+ + R +LD +K+R
Sbjct: 456 LAAIKKKKREMPDI--DHTKIEYEPFRKEFYTEPSHLAEMTEEEVASLRLELDGIKVRGH 513
Query: 115 CAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLA 174
PKP++ W Q GL + L+ KL E+ +IQA A I+SG D + + +TGSGKT A
Sbjct: 514 DVPKPVQKWSQCGLGVQTLDVVHKLGWESLTSIQAQAIPTIMSGRDVIGVAKTGSGKTGA 573
Query: 175 FLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------ 210
FL+PM RHI +Q P+ D P+ +++APT EL Q
Sbjct: 574 FLVPMFRHIKDQRPLA-STDGPISMILAPTRELATQIHKDCKPFLRALGLRAVCAYGGAP 632
Query: 211 ------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQIT 255
+++R GR+IDLL N ++ NL R+TY+VLDE DRMFDMGF PQ+
Sbjct: 633 IKDQIAELKRGAEIIVCTAGRLIDLLAANQGRVLNLRRITYVVLDEGDRMFDMGFGPQVV 692
Query: 256 RIVQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDE 303
+I+ +IRPDRQ VLFS TFP +E LARKT +V I V R D+
Sbjct: 693 KIMASIRPDRQTVLFSATFPKSMEALARKTLNDPVEITVGGKSVVAREITQIVEVRNNDQ 752
Query: 304 K---ELELVINFDAPNDYEDY 321
K LEL+ N + EDY
Sbjct: 753 KFFRLLELLGNLYEDDANEDY 773
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 73/137 (53%), Gaps = 9/137 (6%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + +A SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 819 KAGVFPILVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTE 878
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQ---VHGTGHGGVALNLMKR 397
E YA D+ KA + S V + L+ + D F KV G + HG G G+ M+R
Sbjct: 879 EQDRYALDIAKALKQSGQEVPEPLQKLVDGFNEKVKAGKEKNFSRHGFGGKGLDRLNMER 938
Query: 398 RIRRGKQLRKAQAKEYG 414
R LR+ +A + G
Sbjct: 939 ETAR---LRERKAYKTG 952
>gi|351634469|gb|AEQ55055.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634471|gb|AEQ55056.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634485|gb|AEQ55063.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634487|gb|AEQ55064.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634513|gb|AEQ55077.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634515|gb|AEQ55078.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 303
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 127/208 (61%), Gaps = 40/208 (19%)
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAF
Sbjct: 1 CPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAF 60
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +QPP+ G D P+ L+M PT EL Q
Sbjct: 61 LLPMFRHILDQPPLADG-DGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGI 119
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
+++R GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ R
Sbjct: 120 SEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR 179
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARK 284
I++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 IMENVRPDRQTVLFSATFPRQMEALARR 207
>gi|320590111|gb|EFX02556.1| dead deah box RNA helicase [Grosmannia clavigera kw1407]
Length = 1178
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 179/336 (53%), Gaps = 66/336 (19%)
Query: 10 PVVQIE------IDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAK 63
P V+I +DPLDAFM D+ S A P+ ++ ++ AE SD + + +A+
Sbjct: 408 PTVEISMSTDDNVDPLDAFMADL--SHAPDPSTRRKV-KKPAAEPEAYFSDDDDYFSKAQ 464
Query: 64 KKKRDKNREIIKSKIK------IDYQQL-----RKNFYTQAREITRMSPAYRKQLDL--- 109
K+ + +K K IDY ++ RKNF+ + E++ ++ A +L L
Sbjct: 465 NGIDTKSILAMATKRKKKDIPTIDYSKMELTPIRKNFWVEPHELSELTEAEVAELRLDLD 524
Query: 110 --KIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITET 167
K+ K PKP++ W GLT +LE +L ++ P AIQ A +I+SG D + + +T
Sbjct: 525 GIKVSGKDVPKPVQKWSHCGLTRPMLEVIEQLGYDKPTAIQMQALPVIMSGRDVIGVAKT 584
Query: 168 GSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------- 210
GSGKT+AFL+PM RHI +Q V DD P+GL++ PT EL Q
Sbjct: 585 GSGKTMAFLVPMFRHIMDQERVR--DDGPIGLILTPTRELAVQIHRDCKPFAKKLGLRAV 642
Query: 211 -------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDM 248
+++R GRMIDLL N ++ +L R TY+VLDEADRMFDM
Sbjct: 643 CAYGGPPIKDQIAELKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDM 702
Query: 249 GFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
GFEPQ+ +I NIRPDRQ +LFS T P ++ L +K
Sbjct: 703 GFEPQVMKIFANIRPDRQTLLFSATMPRIIDALVKK 738
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + +A SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 834 KKGVCPVLVATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTE 893
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S V + L + ++ KV G + +G GG L + + R
Sbjct: 894 EQENCAPGIAKALEQSGQPVPERLLEMRKAWREKVKTGKAKDQ-SGFGGKGLEKLDKD-R 951
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKS 432
+LR+ + + +D D E E +K+
Sbjct: 952 EAARLRERKTHKAEGEDDDFDKETAAEDEKKA 983
>gi|351634457|gb|AEQ55049.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis cerana]
gi|351634459|gb|AEQ55050.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis cerana]
gi|351634489|gb|AEQ55065.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634491|gb|AEQ55066.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634509|gb|AEQ55075.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634511|gb|AEQ55076.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634525|gb|AEQ55083.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634527|gb|AEQ55084.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 304
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 127/208 (61%), Gaps = 40/208 (19%)
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAF
Sbjct: 1 CPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAF 60
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +QPP+ G D P+ L+M PT EL Q
Sbjct: 61 LLPMFRHILDQPPLADG-DGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGI 119
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
+++R GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ R
Sbjct: 120 SEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR 179
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARK 284
I++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 IMENVRPDRQTVLFSATFPRQMEALARR 207
>gi|351634493|gb|AEQ55067.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634495|gb|AEQ55068.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634517|gb|AEQ55079.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634519|gb|AEQ55080.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 304
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 127/208 (61%), Gaps = 40/208 (19%)
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAF
Sbjct: 2 CPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAF 61
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +QPP+ G D P+ L+M PT EL Q
Sbjct: 62 LLPMFRHILDQPPLADG-DGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGI 120
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
+++R GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ R
Sbjct: 121 SEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR 180
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARK 284
I++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 181 IMENVRPDRQTVLFSATFPRQMEALARR 208
>gi|351634505|gb|AEQ55073.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634507|gb|AEQ55074.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 305
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 127/208 (61%), Gaps = 40/208 (19%)
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAF
Sbjct: 2 CPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAF 61
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +QPP+ G D P+ L+M PT EL Q
Sbjct: 62 LLPMFRHILDQPPLADG-DGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGI 120
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
+++R GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ R
Sbjct: 121 SEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR 180
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARK 284
I++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 181 IMENVRPDRQTVLFSATFPRQMEALARR 208
>gi|351634473|gb|AEQ55057.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634475|gb|AEQ55058.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634477|gb|AEQ55059.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634479|gb|AEQ55060.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634521|gb|AEQ55081.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634523|gb|AEQ55082.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 302
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 127/208 (61%), Gaps = 40/208 (19%)
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAF
Sbjct: 1 CPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAF 60
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +QPP+ G D P+ L+M PT EL Q
Sbjct: 61 LLPMFRHILDQPPLADG-DGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGI 119
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
+++R GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ R
Sbjct: 120 SEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR 179
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARK 284
I++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 IMENVRPDRQTVLFSATFPRQMEALARR 207
>gi|351634465|gb|AEQ55053.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634467|gb|AEQ55054.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 303
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 127/207 (61%), Gaps = 40/207 (19%)
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAFL
Sbjct: 1 PKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFL 60
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPM RHI +QPP+ G D P+ L+M PT EL Q
Sbjct: 61 LPMFRHILDQPPLADG-DGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGIS 119
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI
Sbjct: 120 EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 179
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 MENVRPDRQTVLFSATFPRQMEALARR 206
>gi|351634501|gb|AEQ55071.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634503|gb|AEQ55072.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 302
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 127/207 (61%), Gaps = 40/207 (19%)
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAFL
Sbjct: 1 PKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFL 60
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPM RHI +QPP+ G D P+ L+M PT EL Q
Sbjct: 61 LPMFRHILDQPPLADG-DGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGIS 119
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI
Sbjct: 120 EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 179
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 MENVRPDRQTVLFSATFPRQMEALARR 206
>gi|387177066|gb|AFJ67650.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177068|gb|AFJ67651.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177070|gb|AFJ67652.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177072|gb|AFJ67653.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177074|gb|AFJ67654.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177076|gb|AFJ67655.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177078|gb|AFJ67656.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177080|gb|AFJ67657.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177082|gb|AFJ67658.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177084|gb|AFJ67659.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177086|gb|AFJ67660.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177088|gb|AFJ67661.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177090|gb|AFJ67662.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177092|gb|AFJ67663.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177094|gb|AFJ67664.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177096|gb|AFJ67665.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177098|gb|AFJ67666.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177100|gb|AFJ67667.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177102|gb|AFJ67668.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177104|gb|AFJ67669.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177106|gb|AFJ67670.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177108|gb|AFJ67671.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177110|gb|AFJ67672.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177112|gb|AFJ67673.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177114|gb|AFJ67674.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177116|gb|AFJ67675.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177118|gb|AFJ67676.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177120|gb|AFJ67677.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177122|gb|AFJ67678.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177124|gb|AFJ67679.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177126|gb|AFJ67680.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177128|gb|AFJ67681.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177130|gb|AFJ67682.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177132|gb|AFJ67683.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177134|gb|AFJ67684.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177136|gb|AFJ67685.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177138|gb|AFJ67686.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177140|gb|AFJ67687.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177142|gb|AFJ67688.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177144|gb|AFJ67689.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177146|gb|AFJ67690.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177148|gb|AFJ67691.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177150|gb|AFJ67692.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177152|gb|AFJ67693.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177154|gb|AFJ67694.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177156|gb|AFJ67695.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177158|gb|AFJ67696.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|387177160|gb|AFJ67697.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|410695630|gb|AFV74955.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis cerana]
gi|410695632|gb|AFV74956.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis florea]
Length = 301
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 127/207 (61%), Gaps = 40/207 (19%)
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAFL
Sbjct: 1 PKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFL 60
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPM RHI +QPP+ G D P+ L+M PT EL Q
Sbjct: 61 LPMFRHILDQPPLADG-DGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGIS 119
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI
Sbjct: 120 EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 179
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 MENVRPDRQTVLFSATFPRQMEALARR 206
>gi|330804914|ref|XP_003290434.1| hypothetical protein DICPUDRAFT_37328 [Dictyostelium purpureum]
gi|325079445|gb|EGC33045.1| hypothetical protein DICPUDRAFT_37328 [Dictyostelium purpureum]
Length = 600
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 129/221 (58%), Gaps = 40/221 (18%)
Query: 103 YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
+R +L +KI K PKPI++W Q GLT KI K +E P IQ+ I+SG D +
Sbjct: 9 FRSELGVKITGKNCPKPIQSWSQAGLTEKIHLMLKKFQYEKPTPIQSQTIPAIMSGRDLI 68
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I TGSGKTLAFLLPM RHI QP VPGD +GL+M+PT EL Q
Sbjct: 69 GIARTGSGKTLAFLLPMFRHILAQPKTVPGDGM-IGLIMSPTRELALQIFSECKKFTKNL 127
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
++R GRMID+LC N +ITNL RVT+LVLDEAD
Sbjct: 128 GLRVACIYGGASISEQIADLKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEAD 187
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGF PQI ++ NIRPDRQ ++FS TFPP+VE A+K
Sbjct: 188 RMFDMGFGPQIMCVIDNIRPDRQTIMFSATFPPKVENAAKK 228
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA + +RGLD K+L LV+NFD P+ EDYVH ++ K A+ FI+
Sbjct: 321 KNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNKGTAYTFITP 380
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAK------VNLGLGQVHGTGHGGVALNL 394
E Y+ ++KA E S V D+LK + +S+ K V L G GH A
Sbjct: 381 EEERYSPSIIKALEQSGSKVPDELKKLNESYDRKRKEGKEVLLAPTGFTGRGHKFDAAEE 440
Query: 395 MKRRIRRGKQLRKAQAKEYGF 415
K+ I RK Q YG
Sbjct: 441 NKKNIE-----RKQQKAHYGI 456
>gi|351634529|gb|AEQ55085.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634531|gb|AEQ55086.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 298
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 127/207 (61%), Gaps = 40/207 (19%)
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAFL
Sbjct: 1 PKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFL 60
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPM RHI +QPP+ G D P+ L+M PT EL Q
Sbjct: 61 LPMFRHILDQPPLADG-DGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGIS 119
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI
Sbjct: 120 EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 179
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 MENVRPDRQTVLFSATFPRQMEALARR 206
>gi|355691613|gb|EHH26798.1| hypothetical protein EGK_16865 [Macaca mulatta]
Length = 1033
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 159/281 (56%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGK +AFLLPM RHI Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKIIAFLLPMFRHIMGQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+ PDRQ V+FS TFP +E L +
Sbjct: 533 RMFDMGFEPQVMRIVDNVHPDRQTVMFSATFPRAMEALTSR 573
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>gi|388580695|gb|EIM21008.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 969
Score = 194 bits (494), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 112/263 (42%), Positives = 145/263 (55%), Gaps = 46/263 (17%)
Query: 67 RDKNREI-IKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPI 120
R K +E+ + K+DY+ RK+FY EI +S R LD +KIR PKP+
Sbjct: 281 RVKRKEVAVTDHSKVDYEPFRKSFYNPPSEIQNLSEEDAENQRLLLDGIKIRGIDCPKPV 340
Query: 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPML 180
W GL + LE L ++ P +IQA A I+SG D + + +TGSGKT+AFLLP+
Sbjct: 341 TKWSLLGLPSSCLEVIKYLQYDQPSSIQAQALPAIMSGRDVIGVAKTGSGKTIAFLLPLF 400
Query: 181 RHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR-------------------------- 214
RHI +Q P+ + P+G++M PT EL Q R
Sbjct: 401 RHIKDQRPL-ENLEGPIGVIMTPTRELAVQIHRECKPFLKALGLRAIAAYGGSPISEQIA 459
Query: 215 -------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI 261
GRMIDLL N ++TNL R TYLVLDEADRMFDMGFEPQ+ +I+ N+
Sbjct: 460 EMKKGAEIVVCTPGRMIDLLAANSGRVTNLRRTTYLVLDEADRMFDMGFEPQVMKIINNV 519
Query: 262 RPDRQAVLFSPTFPPRVEILARK 284
RPDRQ VLFS TFP ++E LARK
Sbjct: 520 RPDRQTVLFSATFPKQMESLARK 542
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/208 (34%), Positives = 97/208 (46%), Gaps = 31/208 (14%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K L+LV+N+DAPN EDYVH ++ K FI+
Sbjct: 638 KNGVIPIVIATSVAARGLDVKLLKLVLNYDAPNHLEDYVHRAGRTGRAGNKGTCITFITP 697
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ D+ KA S V +LKA++++F+ KV G V G+G GG L+ R
Sbjct: 698 EQDKYSVDIEKALTASGASVPSELKAMSEAFLQKVKEGKATVAGSGFGGKGLD----RFE 753
Query: 401 RGKQ-LRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAS 459
+ +Q L KAQ YG DE +K G +AA+N K S
Sbjct: 754 KERQDLEKAQRSAYG----------EDEEVKKDGA-------------ASAATNEKVSKE 790
Query: 460 TPSLISVAQLLPNGGPSIPLPGVLGLSV 487
T + ++ P+ P LG S
Sbjct: 791 TEDMFGEIKIQKGPAPADYKPLNLGAST 818
>gi|164656240|ref|XP_001729248.1| hypothetical protein MGL_3715 [Malassezia globosa CBS 7966]
gi|159103138|gb|EDP42034.1| hypothetical protein MGL_3715 [Malassezia globosa CBS 7966]
Length = 885
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/332 (39%), Positives = 161/332 (48%), Gaps = 69/332 (20%)
Query: 17 DPLDAFMNDMECSFA----EHPNNCF-----------RLGRRLPAE-----DSHSASDYE 56
DPLDA+M ++E EH ++ R G A+ DS A D
Sbjct: 128 DPLDAYMQELESEVQRESHEHGHDGGLEVLMGDDEEPREGTETHADDDVDIDSIRAEDIL 187
Query: 57 LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKI 111
R KKK + I Y+ RK FY EI MS A R +LD + +
Sbjct: 188 ALAHRGSKKKHLPAVD----HAAIAYEPFRKAFYHAPDEIASMSSADAERLRVELDAMSV 243
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGK 171
R K P PI W GL L+ KL + P IQ+ A I+SG D + + +TGSGK
Sbjct: 244 RGKHCPTPITKWSHCGLPVNCLDVIKKLGYVAPTPIQSQAIPAIMSGRDMIGVAKTGSGK 303
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR----------------- 214
T+AFLLPM RH+ +Q PV G + PV LVM PT EL Q R
Sbjct: 304 TMAFLLPMFRHVKDQRPVESG-EGPVALVMTPTRELAVQIFRDAQPFLRAFNLRGACAYG 362
Query: 215 ----------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252
GRMIDLL N ++TN+ RVTYLVLDEADRMFD+GFEP
Sbjct: 363 GTPISEQIGEMKKLVEVVVATPGRMIDLLTANSGRVTNMQRVTYLVLDEADRMFDLGFEP 422
Query: 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
Q+ +I+ IRPDRQ VLFS TFP +E LARK
Sbjct: 423 QVMKILGLIRPDRQTVLFSATFPKPMESLARK 454
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 82/161 (50%), Gaps = 12/161 (7%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + A SV ARGLD K+L+LV+N+D PN EDYVH ++ + FI+
Sbjct: 551 KAGIVPILTATSVAARGLDVKQLKLVVNYDVPNHLEDYVHRAGRTGRAGNQGTCVTFITP 610
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E YA D+V A S+ V +L+A+A F K+ G G+G GG L ++
Sbjct: 611 EQDRYAKDIVAALRASKATVPPELEALASQFKEKLQQGKAHASGSGFGGRGLERLEASRE 670
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDV-----DEGTRKSGGDI 436
R L +AQA + ED +D E V DE R +G DI
Sbjct: 671 R---LLQAQASIFIEDED-ADPEAVAARAADETQRLNGTDI 707
>gi|313241110|emb|CBY33407.1| unnamed protein product [Oikopleura dioica]
Length = 847
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 151/264 (57%), Gaps = 49/264 (18%)
Query: 69 KNREIIKSKI---KIDYQQLRKNFYTQAREITRMSPAYRK-----QLD-LKIREKCAPKP 119
K R++++ KI +I+Y+ +K FYT+ I +++ K +LD ++IR K PKP
Sbjct: 287 KQRKLLEHKIDHGQINYEPFKKTFYTEVPSIAKLTTQEVKLQRATELDGVRIRGKNCPKP 346
Query: 120 IKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM 179
IKTW Q+G ++K+L ++ E P IQA I+SG D + I +TGSGKTL F+LPM
Sbjct: 347 IKTWAQSGCSSKVLTLIKRMKFEKPTPIQAQCLPAIMSGRDVIGIAKTGSGKTLGFVLPM 406
Query: 180 LRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------------- 210
LRH+ Q V G + P+ ++M PT EL Q
Sbjct: 407 LRHMEHQREVEKG-EGPIAVIMTPTRELAIQITKDTRKFANHMRWRTVCVYGGTGISEQI 465
Query: 211 -QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQN 260
+++R GRMID+L N ++TNL R TY VLDEADRMFDMGFEPQ+ I+ +
Sbjct: 466 SELKRGAEIIICTPGRMIDMLAANNGRVTNLRRCTYCVLDEADRMFDMGFEPQVMHILNS 525
Query: 261 IRPDRQAVLFSPTFPPRVEILARK 284
+RPDRQ VLFS TFP +E LAR+
Sbjct: 526 VRPDRQLVLFSATFPRSMEALARR 549
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V NL IA SV ARGLD K L LV+NFD PN YEDYVH C ++ K A+ F++E
Sbjct: 642 KKGVSNLLIATSVAARGLDVKNLILVVNFDCPNHYEDYVHRCGRTGRAGNKGTAYTFLTE 701
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF-IAKVNLGLGQVHGTGHGGVALNLMKRRI 399
E YA D++KA E+S+ V L+ + + + + + LG +G G +
Sbjct: 702 EEGKYAGDIIKALEMSKAEVPKHLENLWERYKLNQEKLGKTVQKSSGFSGSGFKFDEAEN 761
Query: 400 RRGKQLRKAQAKEYGFGE-DKSDSEDVD 426
+ K + Q + G+ E D D+ +VD
Sbjct: 762 QMDKDRKNMQKQALGYHESDDEDTGNVD 789
>gi|448100355|ref|XP_004199330.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
gi|359380752|emb|CCE82993.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
Length = 900
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/271 (40%), Positives = 156/271 (57%), Gaps = 49/271 (18%)
Query: 62 AKKKKRDKNREIIKSKI---KIDYQQLRKNFYTQAREITRMSPAYRK--QLDL---KIRE 113
+ K K+ N+EI + + +IDY+ RK+FY + +EI M+ A +LDL +++
Sbjct: 236 SSKLKKFHNKEIELNDVNHSEIDYKPFRKDFYKEPKEIADMTEAEVDLMRLDLGGIRVKG 295
Query: 114 KCAPKPIKTWRQTGLTTKILETF-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKT 172
P+PI W GL I+ KL + +P IQ+ A I+ G D + + +TGSGKT
Sbjct: 296 SSPPRPISKWSHLGLPNSIMTILKEKLAYNSPSPIQSQALPAIMKGRDIIGVAKTGSGKT 355
Query: 173 LAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------- 210
L+F LP+LRH+ +QPP++PG D P+GL+M PT EL Q
Sbjct: 356 LSFSLPLLRHVQDQPPLLPG-DGPIGLIMTPTRELASQIHKEISHFSKRLNISTCCCFGG 414
Query: 211 --------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQ 253
++++ GR+IDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ
Sbjct: 415 SSIEPQIGELKKGSQVLVGTPGRIIDLLAANNGRVTNLRRVTYLVLDEADRMFDMGFEPQ 474
Query: 254 ITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+ ++V IR D Q VLFS TFP ++E+LARK
Sbjct: 475 VMKVVTRIRSDVQIVLFSATFPRKMELLARK 505
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 278 VEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCA 334
++ + K + ++ IA SV ARGLD K L+LVINFDA + EDYVH ++ A
Sbjct: 605 IKDFSSKNSGLDILIATSVAARGLDVKGLDLVINFDAASHLEDYVHRVGRTGRAGKNGTA 664
Query: 335 FRFISEENAIYATDLVKAFELS---ELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVA 391
F++ + DLV+A + S E + + L + F KV G +++ G GG
Sbjct: 665 ITFVARDQEKAMADLVRAMKASKGAECEIDEVLLENSRKFFEKVKQGKEKIN-FGFGGKG 723
Query: 392 LNLMKRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRK 431
L+ ++ K L Q K YG E +D+ D K
Sbjct: 724 LDNLQEIRDSTKDL---QRKVYGESEGVTDTGKQDSTANK 760
>gi|351634497|gb|AEQ55069.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634499|gb|AEQ55070.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 301
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 126/206 (61%), Gaps = 40/206 (19%)
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
KPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAFLL
Sbjct: 1 KPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLL 60
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------------- 210
PM RHI +QPP+ GD P+ L+M PT EL Q
Sbjct: 61 PMFRHILDQPPLADGD-GPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISE 119
Query: 211 ---QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+++RG RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+
Sbjct: 120 QIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIM 179
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARK 284
+N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 ENVRPDRQTVLFSATFPRQMEALARR 205
>gi|342319919|gb|EGU11864.1| Pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Rhodotorula
glutinis ATCC 204091]
Length = 1534
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/265 (42%), Positives = 144/265 (54%), Gaps = 46/265 (17%)
Query: 65 KKRDKNREI-IKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPK 118
KK K RE+ + KIDY RK FYT E+ +S A R +LD +K+R PK
Sbjct: 512 KKVKKGRELAVPDHSKIDYLPFRKAFYTAPPEVASLSQEETDALRLELDDIKVRGAEPPK 571
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P W GL ++ L + P +IQA A I+SG D + + +TGSGKT+AF+LP
Sbjct: 572 PATKWSYFGLPAACIDVIKGLEYAAPTSIQAQAIPSIMSGRDIIGVAKTGSGKTMAFILP 631
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR------------------------ 214
M RHI +QPP+ P D P+ ++M PT EL Q +
Sbjct: 632 MFRHIKDQPPLRPL-DGPIAIIMTPTRELATQIYKECKPFLKALGLRASCAYGGMPLKDN 690
Query: 215 ---------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
GRMI+LL N ++ NL RVTYLVLDEADRMFDMGFEPQ+ +I+
Sbjct: 691 IADMKRGSEVIVCTPGRMIELLTTNSGRLINLQRVTYLVLDEADRMFDMGFEPQVMKIIG 750
Query: 260 NIRPDRQAVLFSPTFPPRVEILARK 284
IRPDRQ VLFS TFP ++E LARK
Sbjct: 751 QIRPDRQTVLFSATFPRQMEALARK 775
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSW----LKSCAF 335
I+ K C + IA SV ARGLD K+L+LVI +D PN EDYVH ++ +C
Sbjct: 867 IVDFKNGSCPIVIATSVAARGLDVKQLKLVIQYDPPNHMEDYVHRAGRTGRAGNTGTC-V 925
Query: 336 RFISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
FI+ E Y+ D++KA + S V +L+ +A SF KV G Q G+G GG L +
Sbjct: 926 TFITPEQERYSLDILKALQASNAPVPPELEEMAKSFAEKVKAGKAQAAGSGFGGKGLERL 985
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVD 426
+ +A E E K + E +
Sbjct: 986 DTERDAASRAERAAYGETAKDEKKEEGEQTE 1016
>gi|550329|emb|CAA57417.1| putative RNA helicase [Dictyostelium discoideum]
Length = 582
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/223 (46%), Positives = 131/223 (58%), Gaps = 40/223 (17%)
Query: 101 PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLD 160
P +R +L +KI K PKPI++W Q GLT K+ K +E P +IQA I++G D
Sbjct: 2 PDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRD 61
Query: 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------- 210
+ I TGSGKTLAFLLPM RHI QP PG+ + L+M+PT EL Q
Sbjct: 62 LIGIARTGSGKTLAFLLPMFRHILAQPKSAPGE-GMIALIMSPTRELALQIHVECKKFSK 120
Query: 211 --------------------QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDE 241
+++RG RMID+LC N +ITNL RVT+LVLDE
Sbjct: 121 VLGLRTACVYGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDE 180
Query: 242 ADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
ADRMFDMGF PQI IV +IRPDRQ ++FS TFPP+VE +A+K
Sbjct: 181 ADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPPKVENVAKK 223
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA + +RGLD K+L LV+NFD P+ EDYVH ++ + A+ FI+
Sbjct: 316 KNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITP 375
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAK------VNLGLGQVHGTGHGGVALNL 394
+ +++ ++KA E S V D+L+ + D++ K V L G GH A
Sbjct: 376 DEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEGKDVLLAPTGFTGRGHKFDAAEE 435
Query: 395 MKRRIRRGKQLRKA 408
K+ I R KQ RKA
Sbjct: 436 DKKNIER-KQQRKA 448
>gi|328766962|gb|EGF77014.1| hypothetical protein BATDEDRAFT_645, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 589
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/251 (43%), Positives = 147/251 (58%), Gaps = 46/251 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPAY--RKQLDL---KIREKCAPKPIKTWRQTGLTTKIL 133
+I+Y+ RK+FY + E+ M+ +K++DL KIR PKPI+ W G+ +L
Sbjct: 13 RINYEPFRKDFYVEPPELANMTAEEVDQKRIDLDGIKIRGVRCPKPIEKWTHFGMPPGVL 72
Query: 134 ETFSK-LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
E + L ++ P +IQ+ A I+ G D + I +TGSGKT+AFLLPM RHI +Q P+
Sbjct: 73 EVIRRVLKYDRPSSIQSQAIPAIVGGRDVIGIAKTGSGKTIAFLLPMFRHIKDQRPIQAM 132
Query: 193 DDSPVGLVMAPTGELVRQ------------------------------QVRRG------- 215
+ S + L+M PT EL Q +++RG
Sbjct: 133 EGS-IALIMTPTRELAVQIHRECKHFTKILNLRAVCCYGGSPIKDQIAELKRGAEIIICT 191
Query: 216 --RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
RMIDLLC N ++TNL RVTYLVLDEADRMFDMGFEPQ+ ++V NIRPDRQ VLFS T
Sbjct: 192 PGRMIDLLCSNAGRVTNLRRVTYLVLDEADRMFDMGFEPQVMKMVNNIRPDRQTVLFSAT 251
Query: 274 FPPRVEILARK 284
FP ++E LARK
Sbjct: 252 FPRKMEALARK 262
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 89/170 (52%), Gaps = 11/170 (6%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
KT N+ IA SV ARGLD K+L++V+N++ PN EDYVH ++ K A+ FI
Sbjct: 359 KTGSTNIMIATSVAARGLDVKQLKIVVNYECPNHMEDYVHRVGRTGRAGNKGTAYTFILP 418
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E +A D+VKA +S + V L+ + D F+ K+ G Q + +G GG L + +
Sbjct: 419 EQDRFALDIVKALTMSGVEVPSSLQELTDRFMEKIKAGSMQYNSSGFGGRGLEQLDKERD 478
Query: 401 RGKQLRKAQ--AKEYGFGEDKSDS----EDVDEGTRKSGGDISHQDSIAK 444
K+++K EY +D+ +D DE T K GD+ IAK
Sbjct: 479 LVKRIQKKSLVGGEYEIEDDEEQQIMLDDDDDENTGK--GDLISGIEIAK 526
>gi|313238875|emb|CBY13871.1| unnamed protein product [Oikopleura dioica]
Length = 1036
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/264 (41%), Positives = 151/264 (57%), Gaps = 49/264 (18%)
Query: 69 KNREIIKSKI---KIDYQQLRKNFYTQAREITRMSPAYRK-----QLD-LKIREKCAPKP 119
K R++++ KI +I+Y+ +K FYT+ I +++ K +LD ++IR K PKP
Sbjct: 311 KQRKLLEHKIDHGQINYEPFKKTFYTEVPSIAKLTTQEVKLQRATELDGVRIRGKNCPKP 370
Query: 120 IKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM 179
IKTW Q+G ++K+L ++ E P IQA I+SG D + I +TGSGKTL F+LPM
Sbjct: 371 IKTWAQSGCSSKVLTLIKRMKFEKPTPIQAQCLPAIMSGRDVIGIAKTGSGKTLGFVLPM 430
Query: 180 LRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------------- 210
LRH+ Q V G + P+ ++M PT EL Q
Sbjct: 431 LRHMEHQREVEKG-EGPIAVIMTPTRELAIQITKDTRKFANHMRWRTVCVYGGTGISEQI 489
Query: 211 -QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQN 260
+++R GRMID+L N ++TNL R TY VLDEADRMFDMGFEPQ+ I+ +
Sbjct: 490 SELKRGAEIIICTPGRMIDMLAANNGRVTNLRRCTYCVLDEADRMFDMGFEPQVMHILNS 549
Query: 261 IRPDRQAVLFSPTFPPRVEILARK 284
+RPDRQ VLFS TFP +E LAR+
Sbjct: 550 VRPDRQLVLFSATFPRSMEALARR 573
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V NL IA SV ARGLD K L LV+NFD PN YEDYVH C ++ K A+ F++E
Sbjct: 666 KKGVSNLLIATSVAARGLDVKNLILVVNFDCPNHYEDYVHRCGRTGRAGNKGTAYTFLTE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF-IAKVNLGLGQVHGTGHGGVALNLMKRRI 399
E YA D++KA E+S+ V L+ + + + + + LG +G G +
Sbjct: 726 EEGKYAGDIIKALEMSKAEVPKHLENLWERYKLNQEKLGKTVQKSSGFSGSGFKFDEAEN 785
Query: 400 RRGKQLRKAQAKEYGFGE-DKSDSEDVD 426
+ K + Q + G+ E D D+ +VD
Sbjct: 786 QMDKDRKNMQKQALGYHESDDEDTGNVD 813
>gi|281207155|gb|EFA81338.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 1157
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/347 (36%), Positives = 169/347 (48%), Gaps = 66/347 (19%)
Query: 17 DPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAK------------- 63
DPLDAFMN + S G ++ + + + +AK
Sbjct: 382 DPLDAFMNQLMKSNNNTNKADGNGGNGATTAAANGNGNGTIVLMKAKRLEDGDEADFEEE 441
Query: 64 --------KKKRDKNREIIKS-KIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLK 110
K+ + RE++ + IDY KNFY + ++ M+ YR +L +K
Sbjct: 442 SEDENEQEKEVKKGKRELLSTDHSSIDYPAFEKNFYIEVPTLSNMTDTEVLDYRSELGIK 501
Query: 111 IREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSG 170
I K PKP+ TW Q GL KI + K +E P IQA I+SG + + I TGSG
Sbjct: 502 ITGKNCPKPVLTWAQCGLPEKIHQLLKKNEYEKPTPIQAQTIPAIMSGRNIIGIARTGSG 561
Query: 171 KTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------- 210
KTLAFLLPM RH+ Q G + VGL+M+PT EL Q
Sbjct: 562 KTLAFLLPMFRHVLSQDRPKQG-EGMVGLIMSPTRELALQIYSECKKFSKVLGLRVCCVY 620
Query: 211 ----------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFE 251
++R GRMID+LC N +ITNL RV++LVLDEADRMFD+GF
Sbjct: 621 GGANIGEQIADLKRGADIVVCTPGRMIDILCANNKRITNLRRVSFLVLDEADRMFDLGFG 680
Query: 252 PQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRA 298
PQI I+ N+RPDRQ V+FS TFP +VE +ARK V L I R+
Sbjct: 681 PQIMCIIDNVRPDRQTVMFSATFPFKVEQVARKILVKPLEIIAGGRS 727
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA + +RGLD K+L LVIN+D P+ EDYVH ++ K A+ F+
Sbjct: 806 KNKIKTILIATPLASRGLDVKDLNLVINYDCPDHLEDYVHRVGRTGRAGNKGTAYTFVLP 865
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ +A ++KA E S V ++L + +
Sbjct: 866 DEGRFAPSIIKALEQSGAKVPEELTKLGAEY 896
>gi|58263430|ref|XP_569125.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108386|ref|XP_777144.1| hypothetical protein CNBB3750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819236|sp|P0CQ99.1|PRP5_CRYNB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|338819237|sp|P0CQ98.1|PRP5_CRYNJ RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|50259829|gb|EAL22497.1| hypothetical protein CNBB3750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223775|gb|AAW41818.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1072
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 176/346 (50%), Gaps = 61/346 (17%)
Query: 18 PLDAFMNDMECSFAE-HPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREIIKS 76
PLDAFM D E + + R+G R+ AED + +++ K + + + +
Sbjct: 284 PLDAFMRDNVQQVVEVNKADAKRMGLRV-AEDGSDDENQGQVVEKDKLAEAEALLQQAAA 342
Query: 77 KI-----------KIDYQQLRKNFYTQAREITRM----SPAYRKQLD-LKIREKCAPKPI 120
K KIDY+ RK FY E+ M + R ++D +KIR + APKP+
Sbjct: 343 KSRKKDLPPPDHSKIDYEPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPV 402
Query: 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPML 180
+ W GL L+ E P +IQA A I+SG D + I +TGSGKT+AFLLPML
Sbjct: 403 RNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPML 462
Query: 181 RHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR-------------------------- 214
RH+ +Q PV G + P+ +VM+PT EL Q +
Sbjct: 463 RHVRDQRPVS-GSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIA 521
Query: 215 -------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI 261
GRMIDLL N ++TN+ R TY+V+DEADRMFDMGFEPQ+ +I+ N+
Sbjct: 522 AMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNV 581
Query: 262 RPDRQAVLFSPTFPPRVEILARKTNVCNLSI---ANSVRARGLDEK 304
RP Q VLFS TFP +E LAR+ V L I SV A +D++
Sbjct: 582 RPSAQKVLFSATFPKTMESLARRILVKPLEITVGGRSVVAPEIDQR 627
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A SV ARGLD KEL+LVIN+DAPN EDYVH ++ K FI+ E ++ D
Sbjct: 711 VATSVAARGLDVKELKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVD 770
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+V+A E S+ + DDLK ++DSF+ K+ G + G+G+ G L
Sbjct: 771 IVRALEASKAFIPDDLKKMSDSFLGKIKSGKARAAGSGYSGKGL 814
>gi|351634533|gb|AEQ55087.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634535|gb|AEQ55088.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 286
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 126/206 (61%), Gaps = 40/206 (19%)
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
KPIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAFLL
Sbjct: 1 KPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLL 60
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------------- 210
PM RHI +QPP+ GD P+ L+M PT EL Q
Sbjct: 61 PMFRHILDQPPLADGD-GPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISE 119
Query: 211 ---QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+++RG RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI+
Sbjct: 120 QIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIM 179
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARK 284
+N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 ENVRPDRQTVLFSATFPRQMEALARR 205
>gi|351634461|gb|AEQ55051.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis florea]
gi|351634463|gb|AEQ55052.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis florea]
Length = 309
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 126/208 (60%), Gaps = 40/208 (19%)
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PK IK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAF
Sbjct: 1 CPKRIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAF 60
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +QPP+ GD P+ L+M PT EL Q
Sbjct: 61 LLPMFRHILDQPPLADGD-GPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGI 119
Query: 211 -----QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
+++RG RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ R
Sbjct: 120 SEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR 179
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARK 284
I++N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 IMENVRPDRQTVLFSATFPRQMEALARR 207
>gi|393246045|gb|EJD53554.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 849
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/280 (42%), Positives = 150/280 (53%), Gaps = 47/280 (16%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KI+Y+ RK FY ++ MS R +LD +KIR PKPI W GL L
Sbjct: 137 KINYEPFRKAFYHPPPDVAEMSEEEADLLRLELDGIKIRGVDCPKPITKWAHCGLPASCL 196
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +LN + P IQ+ A I+SG D + I +TGSGKT+AFLLP+ RHI +Q P+
Sbjct: 197 DVIKRLNFDRPTPIQSQAIPAIMSGRDVIGIAKTGSGKTIAFLLPLFRHIKDQRPL-ESM 255
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
+ P+ LVM PT EL Q R
Sbjct: 256 EGPMALVMTPTRELAVQIHRECKPFLKVLGLRAVCAYGGSPIKDQIAEMKKGTEIVVCTP 315
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 316 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATF 375
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDA 314
P +++ LARK L I +V + + E+E ++ A
Sbjct: 376 PKQMDSLARKILKKPLEI--TVGGKSVVAPEIEQIVEVRA 413
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 74/139 (53%), Gaps = 6/139 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + A SV ARGLD K+L+LV+N+DAPN EDYVH ++ K FI+
Sbjct: 481 KNGVVPIITATSVAARGLDVKQLKLVVNYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 540
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ D+ +A + S V +L+ +++ F+ KV G G+G G L+ + + R
Sbjct: 541 EQEQYSVDIYRALKASNAKVPPELEELSNGFLDKVKAGKAHHAGSGFRGKGLDKLDQE-R 599
Query: 401 RGKQLRKAQAKEYGFGEDK 419
K KAQ YG G D+
Sbjct: 600 EAKD--KAQRSAYGEGLDE 616
>gi|449549675|gb|EMD40640.1| hypothetical protein CERSUDRAFT_80293 [Ceriporiopsis subvermispora
B]
Length = 877
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/250 (44%), Positives = 137/250 (54%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+I Y+ RK FYT +I M+ R +LD +KIR P+P+ W GL L
Sbjct: 176 RIKYEPFRKEFYTAPPDIAEMTDDEADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCL 235
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
E KL + P IQA A I+SG D + + +TGSGKT+AFLLPM RHI +Q P+ +
Sbjct: 236 EVIKKLGYTAPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLEQME 295
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
PV +VM PT EL Q R
Sbjct: 296 -GPVAVVMTPTRELAVQIHRECKPFLRVLGLRAVCAYGGSPIKDQIAEMKKGAEIIVCTP 354
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 355 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATF 414
Query: 275 PPRVEILARK 284
P +++ LARK
Sbjct: 415 PRQMDSLARK 424
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 81/139 (58%), Gaps = 6/139 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 520 KSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 579
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ D+ +A + S V +L+ +A+ F+ KV G +V G+G GG L+ + + R
Sbjct: 580 EQDRYSVDIYRALKASNAAVPKELEDLANGFLDKVKSGKAKVAGSGFGGKGLDRLDQE-R 638
Query: 401 RGKQLRKAQAKEYGFGEDK 419
K+ KA+ K YG E++
Sbjct: 639 DAKE--KAERKAYGEPEEE 655
>gi|402226174|gb|EJU06234.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 734
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 150/276 (54%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KI Y+ RK FY + EI M R LD +KIR + PKPI W GL + L
Sbjct: 75 KIAYESFRKEFYHEPPEIADMDEEGVGLLRLSLDGIKIRGQDCPKPITRWAHCGLPSVCL 134
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +L + P AIQA A I+SG D + + +TGSGKT+AFLLP+ RHI +Q P+ +
Sbjct: 135 DVIKRLGYTAPTAIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQRPIEIME 194
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
P+ ++M PT EL Q R
Sbjct: 195 -GPMAIIMTPTRELAVQIHRECKPFLKVMNLRAVCAYGGSPIKDQIAEMKKGAEIIVCTP 253
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 254 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATF 313
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +++ LARK + + + +V R + E+E ++
Sbjct: 314 PKQMDSLARK--ILHRPLEITVGGRSVVAPEIEQIV 347
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 299 RGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATDLVKAFEL 355
RGLD K+L+LVIN+DAPN EDYVH ++ K FI+ E Y+ D+ +A E
Sbjct: 434 RGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITPEQERYSVDIYRALEA 493
Query: 356 SELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKAQAKEYGF 415
S+ + ++L ++A+ F+ KV G V G+G GG L+ + + R ++ KA+ YG
Sbjct: 494 SKAKIPEELSSMANGFLEKVRTGKAHVAGSGFGGKGLDKLDK--DRDTKM-KAERNAYGE 550
Query: 416 GEDKSDSEDVDE 427
GE+ + +E
Sbjct: 551 GEEPKPATSFEE 562
>gi|390601156|gb|EIN10550.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 966
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 183/377 (48%), Gaps = 70/377 (18%)
Query: 1 MPETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSHSASD 54
M T + V + E+DPLDAFM ++ + + P++ D + +
Sbjct: 153 MKSKTKDAMDVDEDEVDPLDAFMTGIKEEVKKVNEEDIKKAGAAPSQQSRVRLDDGTEDN 212
Query: 55 YELFMKRAKKK--KRDKNREIIKSKI---------------KIDYQQLRKNFYTQAREIT 97
E F + + + + + N E I + ++ Y+ RK FY +I
Sbjct: 213 VEDFAEGVQDELDQTELNPEDILALAAKKAKKKDLATVDHSRVQYEPFRKEFYIAPPDIA 272
Query: 98 RMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPAS 152
M+ R +LD +KIR P+P+ W GL LE +LN P IQA A
Sbjct: 273 AMTDEDAELVRLELDSIKIRGVDCPRPVTKWSHFGLPASCLEVIKRLNFTAPTPIQAQAI 332
Query: 153 ALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQV 212
I+SG D + + +TGSGKT+AFLLPM RHI +Q P+ + P+G++M PT EL Q
Sbjct: 333 PAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLEQME-GPIGVIMTPTRELAVQIH 391
Query: 213 RR---------------------------------------GRMIDLLCKNGVKITNLTR 233
R GRMIDLL N ++TNL R
Sbjct: 392 RECKPFLKVLNLRAVCAYGGSPIKDQIADMKKGAEIIVCTPGRMIDLLTANSGRVTNLKR 451
Query: 234 VTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIA 293
VTY+VLDEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TFP +++ LARK L I
Sbjct: 452 VTYIVLDEADRMFDMGFEPQVMKIINNIRPDRQTVLFSATFPKQMDSLARKILRKPLEI- 510
Query: 294 NSVRARGLDEKELELVI 310
+V R + E+E ++
Sbjct: 511 -TVGGRSVVAAEIEQIV 526
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 80/140 (57%), Gaps = 8/140 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+E
Sbjct: 598 KSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITE 657
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN-LMKRRI 399
E Y+ D+ +A + S V +L+ +A+ F+ KV G + G+G GG L+ L + R
Sbjct: 658 EQERYSVDIYRALKASNAPVPAELEQLANGFLDKVKSGKAKAAGSGFGGKGLDKLDQERD 717
Query: 400 RRGKQLRKAQAKEYGFGEDK 419
R K RKA YG E++
Sbjct: 718 AREKAERKA----YGESEEE 733
>gi|260947074|ref|XP_002617834.1| hypothetical protein CLUG_01293 [Clavispora lusitaniae ATCC 42720]
gi|238847706|gb|EEQ37170.1| hypothetical protein CLUG_01293 [Clavispora lusitaniae ATCC 42720]
Length = 896
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 113/323 (34%), Positives = 172/323 (53%), Gaps = 65/323 (20%)
Query: 17 DPLDAFMNDME----------CSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKK 66
D LDAF+ +E + +EH + EDS + SD + + + K
Sbjct: 185 DALDAFVQHLENEQMPELMSDVAMSEHEAS--------DTEDSEAESDSDDKLLSLRLKN 236
Query: 67 RDKNREI-IKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLDL-----KIREKCAPKPI 120
K +E+ + +DY RK+FY +++ ++ ++ ++L L K++ P+PI
Sbjct: 237 LQKGKELSVVDHDSVDYMPFRKDFYQESQSVSDLTEEEVEELRLQMEGIKVKGSNCPRPI 296
Query: 121 KTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM 179
W Q G ++ I+ KL ++ P IQ A +I+SG D ++I +TGSGKT+AF+LPM
Sbjct: 297 WMWSQLGFSSTIMSLIEEKLEYKKPTPIQCQALPIIMSGRDILSIAKTGSGKTMAFVLPM 356
Query: 180 LRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR------------------------- 214
LRH+ EQPP+ G D P+ L+++PT EL Q ++
Sbjct: 357 LRHVQEQPPLSKG-DGPIALLLSPTRELALQIFKQLSIFTKKLGISACCCYGGSSIELQI 415
Query: 215 --------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQN 260
GR+IDLL NG ++ NL RVTY+VLDEADRMFD GFEPQ+ +I
Sbjct: 416 AELKKGCQVVVSTPGRLIDLLAANGGRVCNLRRVTYVVLDEADRMFDFGFEPQVNKIFSQ 475
Query: 261 IRPDRQAVLFSPTFPPRVEILAR 283
+RPDRQ++LFS TF ++E+LA+
Sbjct: 476 VRPDRQSILFSATFARKMEMLAK 498
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 16/130 (12%)
Query: 279 EILARKTNVCNLS---------IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSW 329
E + RK + N S IA S+ ARGLD K L LV+N+D N EDYVH ++
Sbjct: 589 EQIDRKYAIKNFSDNDSGVDVLIATSIAARGLDVKGLGLVVNYDPANHMEDYVHRVGRTG 648
Query: 330 L---KSCAFRFISEENAIYATDLVKAFELSEL---VVRDDLKAVADSFIAKVNLGLGQVH 383
A+ F++ + TDLVKA LS++ + L +++ F+ +V G +
Sbjct: 649 RAGNTGVAYTFVTSKQERPITDLVKAMRLSKMPEDAIDQRLVEISNGFLTRVKDGEEKFR 708
Query: 384 GTGHGGVALN 393
G GG LN
Sbjct: 709 -FGFGGKGLN 717
>gi|393215693|gb|EJD01184.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 868
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/276 (42%), Positives = 147/276 (53%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+I Y+ RK FY EI M+ R +LD +KIR P+PI W GL L
Sbjct: 154 RIVYEPFRKEFYRAPPEIAEMTDEEADLLRLELDGIKIRGIDCPRPITKWSHCGLPASCL 213
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ KL P IQA A I+SG D + + +TGSGKT+AFLLP+ RHI +Q P+ P
Sbjct: 214 DVIKKLGFTGPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQRPLEPM- 272
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
+ P+ +VM PT EL Q R
Sbjct: 273 EGPMAIVMTPTRELATQIHRECKPFLKVLNLRAVCAYGGSPIKDQIAEMKKGAEIIVCTP 332
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 333 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVGNIRPDRQTVLFSATF 392
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +++ LARK L I +V R + E+E ++
Sbjct: 393 PKQMDSLARKILKKPLEI--TVGGRSVVAAEIEQIV 426
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 77/139 (55%), Gaps = 6/139 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 498 KAGFVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 557
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ DL +A S V +L+ +A+ F+ KV G G+G GG L+ + + R
Sbjct: 558 EQDRYSVDLFRALRASNAKVPQELEDLANGFLEKVKAGKAHAAGSGFGGKGLDRLDKE-R 616
Query: 401 RGKQLRKAQAKEYGFGEDK 419
K+ KA+ K YG G+DK
Sbjct: 617 DAKE--KAERKAYGEGDDK 633
>gi|351634481|gb|AEQ55061.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
gi|351634483|gb|AEQ55062.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Apis mellifera]
Length = 301
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 125/205 (60%), Gaps = 40/205 (19%)
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
PIK+W Q G+T K LE KL +E P IQ A I+SG D + I +TGSGKTLAFLLP
Sbjct: 1 PIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLAFLLP 60
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------- 210
M RHI +QPP+ GD P+ L+M PT EL Q
Sbjct: 61 MFRHILDQPPLADGD-GPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGISEQ 119
Query: 211 --QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+++RG RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI++
Sbjct: 120 IAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIME 179
Query: 260 NIRPDRQAVLFSPTFPPRVEILARK 284
N+RPDRQ VLFS TFP ++E LAR+
Sbjct: 180 NVRPDRQTVLFSATFPRQMEALARR 204
>gi|323453556|gb|EGB09427.1| hypothetical protein AURANDRAFT_53132 [Aureococcus anophagefferens]
Length = 790
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/298 (40%), Positives = 155/298 (52%), Gaps = 56/298 (18%)
Query: 53 SDYELFMKRAKKKKR---DKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA---YRKQ 106
S E+F ++ KKK+ D RE +Y ++RKNFY R + +S A R+
Sbjct: 12 SALEVFAEQLKKKELKPVDHARE--------NYVKIRKNFYVVPRALGALSAADVALRRD 63
Query: 107 LD-LKIREKCAPKPIKTWRQTGLTTKILETFSKL--NHENPVAIQAPASALIISGLDSVA 163
D +K+R K P PI+TW Q GL K K +H P IQ A ++SG D +
Sbjct: 64 ADEIKVRGKGCPPPIETWGQCGLPDKAHGALVKAFGDHTEPFPIQKQALPALMSGRDVIG 123
Query: 164 ITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR--------- 214
I +TGSGKTLAF+LP+LRHI +QPP+V G D PV L++AP EL Q R
Sbjct: 124 IAKTGSGKTLAFVLPLLRHIMDQPPIVDGGDGPVALILAPARELALQIWREAKRFANPLG 183
Query: 215 ------------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADR 244
GR+ID+L + ++ L RV+Y+VLDEADR
Sbjct: 184 LRAIAVYGGAKVADQIADLKRGAEIVVATPGRLIDILTMSQGRLIGLRRVSYVVLDEADR 243
Query: 245 MFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLD 302
MFDMGFEPQI I++N RPDRQ LFS TFP VE LARK L I R+ D
Sbjct: 244 MFDMGFEPQIAMILRNARPDRQTALFSATFPRAVEQLARKALSYPLEIVAGGRSVAAD 301
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ V + +A SV RGLD + V+N+ APN EDYVH ++ A+ F+
Sbjct: 400 KSGVATVLVATSVAGRGLDVPSIVCVVNYSAPNHLEDYVHRVGRTGRAGRAGTAYTFLDP 459
Query: 341 ENA-IYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGG 389
N YA L KA + +++ + +L ++ F G Q +G+ G
Sbjct: 460 VNEDAYAPILHKALKQAKMAIPPELAELSKKFATAAAAGEKQWASSGYAG 509
>gi|401881497|gb|EJT45796.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 2479]
gi|406696503|gb|EKC99788.1| pre-mRNA splicing factor [Trichosporon asahii var. asahii CBS 8904]
Length = 1120
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/272 (41%), Positives = 149/272 (54%), Gaps = 48/272 (17%)
Query: 80 IDYQQLRKNFYTQAREITRM----SPAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
IDY+ R+NFYT E+ M + R ++D +K+R APKP+++W GL LE
Sbjct: 406 IDYEPFRRNFYTAPAEVLDMDEEEAELVRLEMDGIKVRGLDAPKPVRSWGAFGLPLGCLE 465
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
P AIQA + I+SG D + I +TGSGKT+AFLLP+LRH+ +Q PV G D
Sbjct: 466 VIRAKEWGAPTAIQAQSIPSIMSGRDVIGIAKTGSGKTIAFLLPLLRHVKDQRPVS-GMD 524
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+ L++APT EL Q + G
Sbjct: 525 GPIALILAPTRELAMQIYKESKPFAKVMNLRVTCCVGGQSISDDIAAMKKGAEIVVCTPG 584
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMIDLL N ++TNL R+T++V+DEADRMFDMGFEPQ+ +IV N RPD Q VLFS TFP
Sbjct: 585 RMIDLLTANNGRVTNLRRITFMVMDEADRMFDMGFEPQVMKIVNNTRPDAQKVLFSATFP 644
Query: 276 PRVEILARKTNVCNLSI---ANSVRARGLDEK 304
+E LARK V L I SV A +D++
Sbjct: 645 KTMESLARKILVKPLEITVGGRSVVAPEIDQR 676
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 8/135 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSW----LKSCAFRFIS 339
K+ + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ +C FI+
Sbjct: 752 KSGDIPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNTGTC-ITFIT 810
Query: 340 EENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRI 399
+ ++ D+ +A E S V D LK +++ F+AK+ G + +G G L +R
Sbjct: 811 PDQEKFSVDIARALEASGAFVPDKLKEMSEGFLAKIKSGKARAARSGFRGKGL---ERLD 867
Query: 400 RRGKQLRKAQAKEYG 414
+ ++ +A+ + YG
Sbjct: 868 HKRQEKDRAEKQTYG 882
>gi|409049919|gb|EKM59396.1| hypothetical protein PHACADRAFT_249858 [Phanerochaete carnosa
HHB-10118-sp]
Length = 851
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 115/276 (41%), Positives = 148/276 (53%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+I+Y+ RK FY ++ M+ R +LD +KIR P+P+ W GL L
Sbjct: 146 RINYEPFRKEFYIAPPDVAAMTDEEADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCL 205
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ KL + P IQA A I+SG D + + +TGSGKT+AFLLPM RHI +Q P+ +
Sbjct: 206 DVIKKLGYAGPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLEQME 265
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
PV +VM PT EL Q R
Sbjct: 266 -GPVAVVMTPTRELAVQIHRECKPFLRVLNLRAVCAYGGSPIKDQIAEMKKGAEIIVCTP 324
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 325 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATF 384
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +++ LARK L I +V R + E+E ++
Sbjct: 385 PKQMDSLARKILRKPLEI--TVGGRSVVAAEIEQIV 418
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 81/139 (58%), Gaps = 6/139 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 490 KSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 549
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ D+ +A + S V +L+ +A+ F+ KV G +V G+G GG L+ + + R
Sbjct: 550 EQDRYSVDIYRALKASNAAVPKELEDLANGFLEKVKSGKAKVAGSGFGGKGLDRLDQE-R 608
Query: 401 RGKQLRKAQAKEYGFGEDK 419
K+ KA+ K YG E++
Sbjct: 609 DAKE--KAERKAYGEPEEE 625
>gi|299747858|ref|XP_001837294.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coprinopsis
cinerea okayama7#130]
gi|298407711|gb|EAU84911.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coprinopsis
cinerea okayama7#130]
Length = 1081
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 135/377 (35%), Positives = 183/377 (48%), Gaps = 72/377 (19%)
Query: 9 LPVVQIEIDPLDAFMNDMECSFAE----------HPNNCFRLGRRLPAEDSHSASDYELF 58
+ V + EIDPLDAFM++++ + + N R RL SD E
Sbjct: 279 MDVDEEEIDPLDAFMSEVKEEVKKVNMQDAQKMLNSNGPGRSKIRLDDRMGDEGSDDEQE 338
Query: 59 MKRAKKKKRDKNREIIKSKI---------------KIDYQQLRKNFYTQAREITRMSP-- 101
+ D N E I + K+ Y+ RK FY +I M+
Sbjct: 339 AAPDELDATDLNPEDILALAAKKAKKKELAVVDHSKVQYEPFRKEFYIPPPDIASMTEDE 398
Query: 102 --AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISG 158
R LD +KIR PKP+ W GL +E +LN+ P +IQA A I+SG
Sbjct: 399 AELLRLALDGIKIRGVDCPKPVIKWSHFGLPASCIEVIKRLNYTAPTSIQAQAIPAIMSG 458
Query: 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL----------- 207
D + + +TGSGKT+AFLLP+ RHI +Q P+ + P+ LVM PT EL
Sbjct: 459 RDVIGVAKTGSGKTIAFLLPLFRHIKDQRPLEQME-GPMALVMTPTRELAVQIHKDCKPF 517
Query: 208 ----------------VRQQVRR------------GRMIDLLCKNGVKITNLTRVTYLVL 239
++ Q+ GRMIDLL N ++TNL RVTY+VL
Sbjct: 518 LKVLGLRAVCAYGGSPIKDQIAELKKGAEIIVCTPGRMIDLLTANSGRVTNLKRVTYVVL 577
Query: 240 DEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRAR 299
DEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TFP +++ LARK L I +V R
Sbjct: 578 DEADRMFDMGFEPQVMKIINNIRPDRQTVLFSATFPKQMDSLARKILRKPLEI--TVGGR 635
Query: 300 GLDEKELELVINFDAPN 316
+ E+E ++ A +
Sbjct: 636 SVVAAEIEQIVEVRAED 652
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 102/194 (52%), Gaps = 8/194 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 718 KAGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 777
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN-LMKRRI 399
E Y+ D+ +A + SE + +L+ +A+ F+ KV G Q G+G GG L+ L K R
Sbjct: 778 EQERYSVDIYRALKASEATIPKELEDLANGFLEKVKAGKAQAAGSGFGGKGLDRLDKERD 837
Query: 400 RRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAS 459
R + RKA YG GED+ + +E T K D++ + +I A +SKA
Sbjct: 838 ARERAERKA----YGEGEDEKPATTTEETTTKQADDMTFGNFKVEIKRGPAPDSSKALLG 893
Query: 460 TPSLISVAQLLPNG 473
++ A+ L +
Sbjct: 894 VGGAVAAAKRLAHA 907
>gi|448104053|ref|XP_004200189.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
gi|359381611|emb|CCE82070.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
Length = 900
Score = 191 bits (485), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/271 (40%), Positives = 156/271 (57%), Gaps = 49/271 (18%)
Query: 62 AKKKKRDKNREIIKSKI---KIDYQQLRKNFYTQAREITRMSPAYRK--QLDL---KIRE 113
+ K K+ +N+EI + + +IDY+ RK+FY + +EI M+ A +LDL +++
Sbjct: 236 SSKLKKFQNKEIELNDVNHSEIDYKPFRKDFYKEPKEIADMTEAEIDLLRLDLGGIRVKG 295
Query: 114 KCAPKPIKTWRQTGLTTKILETF-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKT 172
P+PI W GL I+ KL + +P IQ+ A I+ G D + + +TGSGKT
Sbjct: 296 SSPPRPISKWSHLGLPNSIMTILKEKLGYTSPSPIQSQALPAIMKGRDIIGVAKTGSGKT 355
Query: 173 LAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------- 210
L+F LP+LRH+ +Q P++PG D P+GL+M PT EL Q
Sbjct: 356 LSFSLPLLRHVQDQTPLLPG-DGPIGLIMTPTRELASQIHKEISHFSKRLNISTCCCFGG 414
Query: 211 --------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQ 253
++++ GR+IDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ
Sbjct: 415 SSIEPQIGELKKGSQVLVGTPGRIIDLLAANNGRVTNLRRVTYLVLDEADRMFDMGFEPQ 474
Query: 254 ITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+ ++V IR D Q VLFS TFP ++E+LARK
Sbjct: 475 VMKVVTRIRSDVQIVLFSATFPRKMELLARK 505
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 77/160 (48%), Gaps = 10/160 (6%)
Query: 278 VEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCA 334
++ + K + ++ IA SV ARGLD K L+LVINFDA + EDYVH ++ A
Sbjct: 605 IKDFSSKNSGLDILIATSVAARGLDVKGLDLVINFDAASHLEDYVHRVGRTGRAGKNGTA 664
Query: 335 FRFISEENAIYATDLVKAFELS---ELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVA 391
F++ + DLV+A + S E + + L + F KV G +++ G GG
Sbjct: 665 ITFVARDQEKAMADLVRAMKASKGAECEIDEVLLENSRKFFEKVKQGKEKIN-FGFGGKG 723
Query: 392 LNLMKRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRK 431
L+ ++ K L Q K YG E +D+ D K
Sbjct: 724 LDNLQEIRDSTKDL---QRKVYGESEGITDTAKQDSAANK 760
>gi|392593094|gb|EIW82420.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 715
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 152/276 (55%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+I+Y+ RK FY +I MS R +LD +KIR +P+P+ W GL L
Sbjct: 78 RINYEPFRKEFYIPPPDIAAMSDEEADLLRLELDGIKIRGVDSPRPVTKWSHFGLPASCL 137
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +LN+ P AIQA A I+SG D + + +TGSGKT+AFLLP+ RHI +Q P+
Sbjct: 138 DVIKRLNYVAPTAIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQRPL-EQM 196
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
+ P+ +VM PT EL Q R
Sbjct: 197 EGPLAIVMTPTRELAVQIHRECKPFLRVMNLRAVCAYGGSPIKDQIAELKKGAEIIVCTP 256
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TF
Sbjct: 257 GRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIINNIRPDRQTVLFSATF 316
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +++ LARK + + + +V R + E+E ++
Sbjct: 317 PKQMDSLARK--ILHKPLEITVGGRSVVAAEIEQIV 350
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 10/154 (6%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 422 KSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITS 481
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ D+ +A + S V +L+ +A+ F+ KV G QV G+G GG L+ + + R
Sbjct: 482 EQERYSVDIFRALKASNAEVPKELEELANGFLEKVKTGKAQVAGSGFGGKGLDRLDKE-R 540
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGG 434
K +A+ + YG +S+ E E T G
Sbjct: 541 EAKD--RAERQAYG----ESEQEKTQEATAAKEG 568
>gi|392568072|gb|EIW61246.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 830
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/276 (42%), Positives = 147/276 (53%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
K+ Y+ RK FY +I M+ R +LD +KIR P+P+ W GL L
Sbjct: 123 KVPYEPFRKEFYVPPPDIAEMTDEDADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCL 182
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
E KL + P IQA A I+SG D + + +TGSGKT+AFLLPM RHI +Q P+
Sbjct: 183 EVIKKLGYAGPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLEQM- 241
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
+ PV ++M PT EL Q R
Sbjct: 242 EGPVAVIMTPTRELAVQIHRECKPFLRVLNLRAVCAYGGSPIKDQIAEMKKGAEIIVCTP 301
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 302 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATF 361
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +++ LARK L I +V R + E+E ++
Sbjct: 362 PRQMDSLARKILRKPLEI--TVGGRSVVAPEIEQIV 395
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 467 KSGVVPVVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 526
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ D+ +A + S + +L+ +A+ F+ KV G +V G+G GG L+ + + R
Sbjct: 527 EQDRYSVDIYRALQASSAAMPKELETLANGFLDKVKTGKAKVAGSGFGGKGLDRLDQE-R 585
Query: 401 RGKQLRKAQAKEYG 414
K+ KA+ K YG
Sbjct: 586 DAKE--KAERKAYG 597
>gi|302696669|ref|XP_003038013.1| hypothetical protein SCHCODRAFT_43190 [Schizophyllum commune H4-8]
gi|300111710|gb|EFJ03111.1| hypothetical protein SCHCODRAFT_43190, partial [Schizophyllum
commune H4-8]
Length = 674
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 149/276 (53%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
++ Y+ RK FY +I M+ R +LD +KIR P+P+ W GL L
Sbjct: 33 RMKYEPFRKEFYIPPPDIASMTDDEADLLRLELDGIKIRGIDCPRPVTKWSHFGLPASCL 92
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +LN+ P IQA A I+SG D + + +TGSGKT+AFL+P+ RHI +Q P+ P +
Sbjct: 93 DVIKRLNYTAPTPIQAQAVPAIMSGRDVIGVAKTGSGKTIAFLIPLFRHIKDQRPLEPME 152
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
P+ LVM PT EL Q R
Sbjct: 153 -GPIALVMTPTRELATQIHRECKPFLKVLNLRAVCAYGGSPIKDQIADLKKGAEIIVCTP 211
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TF
Sbjct: 212 GRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIINNIRPDRQTVLFSATF 271
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +++ LARK L I +V R + E+E ++
Sbjct: 272 PKQMDSLARKILKKPLEI--TVGGRSVVAAEIEQIV 305
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 100/204 (49%), Gaps = 19/204 (9%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI
Sbjct: 377 KAGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFIEP 436
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ D+ +A + S V +L+A+A+ F+ KV G V G+G GG L+ + R
Sbjct: 437 EQERYSVDIYRALKASNASVPKELEAMANGFLDKVKAGKAHVAGSGFGGKGLDRLDSE-R 495
Query: 401 RGKQLRKAQAKEYGF-----GEDK---SDSEDVDEGTRKSGGDISHQDSIAKIATIAAAS 452
KQ KA+ K YG E+K S E + T SG D++ + ++ A
Sbjct: 496 DAKQ--KAERKAYGEPDQPQAEEKAANSTEEATVKATANSGDDMTFGNFKVEVRRGPAPD 553
Query: 453 NSKASAS-----TPSLISVAQLLP 471
+SK S TP ++P
Sbjct: 554 SSKEPKSLIGGVTPDSTEFHAIIP 577
>gi|353238668|emb|CCA70607.1| related to RNA helicase [Piriformospora indica DSM 11827]
Length = 1042
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 135/250 (54%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPAYRKQLDL-----KIREKCAPKPIKTWRQTGLTTKIL 133
K+ Y+ RK FY +I M+ + L L KIR P P+ W Q GL L
Sbjct: 333 KVTYEPFRKAFYHPTPDIAEMTEQDAENLRLALDGIKIRGVDCPYPVMKWSQCGLPASCL 392
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
E KLN+ P +IQA A I+SG D + + +TGSGKT+AFLLP+ R I +Q P+
Sbjct: 393 EVIKKLNYTAPTSIQAQAIPAIMSGRDIIGVAKTGSGKTIAFLLPLFRQIKDQRPLEQM- 451
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
+ P+ LVM PT EL Q R
Sbjct: 452 EGPMALVMTPTRELAVQIHRECKPFLKALNLRAVCAYGGSPIKDQIAELKKGAEIIVCTP 511
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 512 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATF 571
Query: 275 PPRVEILARK 284
P +++ LARK
Sbjct: 572 PKQMDSLARK 581
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L++VIN+DAPN EDYVH ++ K FI+
Sbjct: 677 KNGVITIVIATSVAARGLDVKQLKVVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITP 736
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ Y+ D+ +A + S V +L+A+A+ F+ KV G + +G GG L+ + R R
Sbjct: 737 DQERYSVDIFRALKASNAEVPPELEALANGFLEKVKSGNAKQASSGFGGKGLDKLDRD-R 795
Query: 401 RGKQLRKAQAKEYGFGED 418
K K Q YG ED
Sbjct: 796 EEKD--KVQRTVYGERED 811
>gi|403418136|emb|CCM04836.1| predicted protein [Fibroporia radiculosa]
Length = 1002
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 137/250 (54%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
++ Y+ RK FY ++ MS R +LD +KIR P+P+ W GL L
Sbjct: 297 RVHYELFRKEFYIAPPDVAAMSDEEADLLRLELDGIKIRGVDCPRPVTKWSHFGLPASCL 356
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ KLN+ P IQA A I+SG D + + +TGSGKT+AFLLP+ RHI +Q P+ +
Sbjct: 357 DVIKKLNYVAPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQRPLEQME 416
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
P+ +VM PT EL Q R
Sbjct: 417 -GPMAVVMTPTRELAVQIHRECKPFLRVLGLRAVCAYGGSPIKDQIAEMKKGAEIIVCTP 475
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 476 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATF 535
Query: 275 PPRVEILARK 284
P +++ LARK
Sbjct: 536 PKQMDSLARK 545
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 79/134 (58%), Gaps = 6/134 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 641 KSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 700
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ D+ +A + S+ V +L+ +A+ F+ KV G +V G+G GG L+ + + R
Sbjct: 701 EQDRYSVDIFRALKASDADVPKELEELANGFLEKVKSGKAKVAGSGFGGKGLDRLDQE-R 759
Query: 401 RGKQLRKAQAKEYG 414
K+ +A+ K YG
Sbjct: 760 DAKE--RAERKAYG 771
>gi|328849200|gb|EGF98385.1| hypothetical protein MELLADRAFT_22529 [Melampsora larici-populina
98AG31]
Length = 815
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 146/276 (52%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KIDY+ RK FY E+ MS R +D +KIR + PKP+ W GL + L
Sbjct: 101 KIDYESFRKAFYHPPAEVEDMSEEEAENIRIAMDGIKIRGQDCPKPVMKWSWFGLHSACL 160
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
E L ++ P IQ A I+SG D + + +TGSGKTLAFLLPM RHI +Q P +
Sbjct: 161 EVIKSLGYQAPSPIQGQAVPAIMSGRDVIGVAKTGSGKTLAFLLPMFRHIKDQRP-LEAL 219
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
+ P+ ++M PT EL Q +
Sbjct: 220 EGPIAMIMTPTRELATQIYKEGRPFLKALGLRAACAYGGSPLKDNIADMKRGAEVIVCTP 279
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMI+LL N ++ N+ RVTYLVLDEADRMFDMGFEPQ+ +IV IRPDRQ VLFS TF
Sbjct: 280 GRMIELLTTNSGRVINMRRVTYLVLDEADRMFDMGFEPQVMKIVNQIRPDRQTVLFSATF 339
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P ++E LARK L I +V R + E+E ++
Sbjct: 340 PKQMEALARKILRRPLEI--TVGGRSVVASEIEQIV 373
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 78/137 (56%), Gaps = 8/137 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FIS
Sbjct: 445 KAGVTPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFISP 504
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ YA DL++A S ++LK ++D+F+ KV G Q G+G GG L+ +++
Sbjct: 505 DQERYAIDLLRALVASGAKYPEELKTMSDAFLEKVKTGKAQASGSGFGGKGLDRLEK--- 561
Query: 401 RGKQLRKAQAKEYGFGE 417
+ K++A+ +GE
Sbjct: 562 --DRDAKSRAERSAYGE 576
>gi|118401955|ref|XP_001033297.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila]
gi|89287645|gb|EAR85634.1| DEAD/DEAH box helicase family protein [Tetrahymena thermophila
SB210]
Length = 1357
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 168/300 (56%), Gaps = 73/300 (24%)
Query: 47 EDSHSASDYELFMKRAKKKKRDKNREIIKSKIK-IDY-----QQLRKNFYTQAREITRMS 100
E+ S DY M+R KK E K ++K IDY + +KNFY +++EI++M+
Sbjct: 620 ENGESKEDY---MERLKK-------EAQKKELKPIDYNEDELEHFQKNFYIESKEISQMT 669
Query: 101 P----AYRKQL-DLKIREKCAPKPIKTWRQTGLTTKILETF-SKLNHENPVAIQAPASAL 154
YR+ L +++++ + P+PIK+W Q+GL+ +ILE K ++ P IQ + +
Sbjct: 670 EDEVKIYRENLGEIQVKGQEVPRPIKSWLQSGLSDRILEVLIEKKKYDKPFPIQCQSLPV 729
Query: 155 IISGLDSV-----------AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAP 203
I+SG D + +I ETGSGKTLA+LLPM+RH+ Q P+ G D P+GL++ P
Sbjct: 730 IMSGRDMIDFLREQAKSKDSIAETGSGKTLAYLLPMIRHVSAQRPLQEG-DGPIGLILVP 788
Query: 204 TGELVRQ------------------------------QVRR---------GRMIDLLCKN 224
T EL Q +++R GR+ID+L +
Sbjct: 789 TRELATQIYLEAKPFLKAYKYEIVAVFGGTGIKGQLSELKRGCEIVVATPGRLIDVLTTS 848
Query: 225 GVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
KITNL R+T +V+DEADRMFD+GFEPQI +I+ RPD+Q VLFS TFP VE LA+K
Sbjct: 849 NGKITNLKRITMVVIDEADRMFDLGFEPQIAKILATTRPDKQTVLFSATFPKNVENLAKK 908
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
+L + + + IA S+ +RGLD K + LV+N+ PN EDY+H ++ K A
Sbjct: 998 LLDFRKGIYKILIATSLSSRGLDVKNVVLVVNYKCPNHIEDYIHRIGRTGRAGNKGTAVT 1057
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGH-GGVALNLM 395
FI E Y+ DL+KA + S+ V ++L + + F KV +G +++ + G N
Sbjct: 1058 FIGPEEDKYSLDLIKALKRSDQKVPEELLRMGEEFKKKVKMGEAKIYNNANMQGKGFNFD 1117
Query: 396 KRRIRRGKQLRKAQAK 411
+ + Q++ Q K
Sbjct: 1118 EEERDKMNQMKYEQKK 1133
>gi|223590058|sp|A5DDF4.2|PRP5_PICGU RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|190345338|gb|EDK37207.2| hypothetical protein PGUG_01305 [Meyerozyma guilliermondii ATCC
6260]
Length = 862
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 144/250 (57%), Gaps = 46/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+++Y +RK FYT E+ + P A R +D +K+R P PI+ W Q GL + I+
Sbjct: 219 QMEYTSVRKKFYTPPEELKDVPPEKVTALRTAMDGIKVRGSDCPMPIQKWAQLGLPSSIM 278
Query: 134 ETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
KL ++ P IQ+ A I+SG D + + TGSGKTLAF++P++RHI +QPP+ G
Sbjct: 279 TVLEEKLGYDTPSPIQSQALPAIMSGRDIIGVANTGSGKTLAFVIPLIRHIMDQPPLKSG 338
Query: 193 DDSPVGLVMAPTGELVRQ------------------------------QVRR-------- 214
D P+G+++ PT EL Q ++R
Sbjct: 339 -DGPIGVILTPTRELALQIQKELVNFTQAVELSVCCCYGGSPIESQIADLKRGTEIIVGT 397
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+IDLL NG ++TNL R T+LVLDEADRMFDMGFEPQ+ +++ IRPD+Q VLFS T
Sbjct: 398 PGRVIDLLAANGGRVTNLRRTTFLVLDEADRMFDMGFEPQVNKVLSQIRPDKQMVLFSAT 457
Query: 274 FPPRVEILAR 283
FP ++E LAR
Sbjct: 458 FPKKLESLAR 467
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 286 NVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL-----KSCAFRFISE 340
N + IA S+ ARGLD + L LVIN+DAP+ EDYVH ++ + S+
Sbjct: 572 NGLRVLIATSIAARGLDVRGLNLVINYDAPSHMEDYVHRVGRTGRAGATGTAVTLVLSSQ 631
Query: 341 ENAIYATDLVKAFELSELV--VRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL-NLMKR 397
E I DLV+A ++S V + +L+++AD F+ KV G + + +G GG L NL +R
Sbjct: 632 EREIR--DLVRAMKMSGKVDDIPAELQSIADKFLKKVKSGEEKFN-SGFGGKGLENLQER 688
Query: 398 RIRRGKQLRKAQAKEYG 414
R +R+ + + YG
Sbjct: 689 R----DNVREIEMQMYG 701
>gi|71027833|ref|XP_763560.1| ATP-dependent RNA helicase [Theileria parva strain Muguga]
gi|68350513|gb|EAN31277.1| ATP-dependent RNA helicase, putative [Theileria parva]
Length = 894
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 124/318 (38%), Positives = 163/318 (51%), Gaps = 48/318 (15%)
Query: 37 CFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREI 96
CF P + S DY + + + K++ R KIDY RKNFY Q I
Sbjct: 331 CFSDDEYDPTKVSMGGPDYMELLPKIRGGKKELPR---VDHSKIDYLPFRKNFYVQVSSI 387
Query: 97 TRMSP----AYRK-QLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPA 151
T M A+RK ++++ K P+PI ++ Q GL IL+ K +E P IQ
Sbjct: 388 TNMGEHEVDAFRKANGNIRVYGKKCPRPISSFSQCGLPDPILKILEKREYEKPFPIQMQC 447
Query: 152 SALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ- 210
++ G D + I ETGSGKTLAFLLP +RH+ +QPP+ D V L++APT ELV Q
Sbjct: 448 IPALMCGRDVIGIAETGSGKTLAFLLPGIRHVLDQPPLRESDGMIV-LIIAPTRELVIQI 506
Query: 211 -----------------------------QVRR---------GRMIDLLCKNGVKITNLT 232
++R GR+ID+L + K+TNL
Sbjct: 507 SNECAKFSKSVGLRTLAVYGGAGIGEQLNALKRGAEIVVGTPGRLIDVLTLSKGKVTNLR 566
Query: 233 RVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSI 292
RVTYLVLDEADRMFDMGF PQI+ IV NIRPDRQ LFS TFP +E LA+K V L I
Sbjct: 567 RVTYLVLDEADRMFDMGFAPQISAIVGNIRPDRQTALFSATFPLMIENLAKKILVKPLQI 626
Query: 293 ANSVRARGLDEKELELVI 310
R + + + +V+
Sbjct: 627 VVGQRGKSASQVDQHVVV 644
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
IA S+ ARG+D K + LVIN+ AP+ +EDYVH ++ ++ F++ E A + D
Sbjct: 719 IATSIAARGIDVKSVVLVINYAAPDHFEDYVHRVGRTGRAGTIGTSYTFLTPEEAAKSHD 778
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVN 376
++KA L+ V +L ++ + +A ++
Sbjct: 779 IIKALRLASQEVPKELLQLSQAHLATMD 806
>gi|224002607|ref|XP_002290975.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972751|gb|EED91082.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 681
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 140/249 (56%), Gaps = 43/249 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y +RKN Y + + ++SP R +L +K+R K AP P+ T+R+ GL+ +I
Sbjct: 15 IEYLTVRKNLYIVPQSLAKLSPLEVAERRAKLGVKVRGKGAPSPVSTFREAGLSERINAV 74
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
N NP +QA I++G D + I +TGSGKTLAF+LPMLRHI +QPP+ PG+
Sbjct: 75 LESKNMVNPFPVQAQCLPCIMAGRDVIGIAKTGSGKTLAFVLPMLRHILDQPPLAPGETG 134
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
P+GL++AP EL Q ++R GR
Sbjct: 135 PIGLILAPARELAYQIHVVCKGFTKHLGLKSTAVYGGAGVAEQIGDLKRGTHILCATPGR 194
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID+L K+ +L RV+ + LDEADR FDMGFE QI+ I+ +RPDRQ VLFS TFP
Sbjct: 195 LIDILTMQSGKLISLQRVSMVCLDEADRAFDMGFESQISAILSAVRPDRQTVLFSATFPK 254
Query: 277 RVEILARKT 285
VE LA+K+
Sbjct: 255 AVEQLAKKS 263
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFI-SEENAI 344
N+ +A SV RGLD V+N+ +PN EDYVH ++ + AF F+ S + A
Sbjct: 363 NVLVATSVAGRGLDVPSCGCVVNYASPNHLEDYVHRVGRTGRAGNRGVAFTFVNSTDEAK 422
Query: 345 YATDLVKAF-ELSELV-VRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRG 402
+A +V+A E + + +L +++S+ KV G + +G+ G +
Sbjct: 423 FAPSIVRALVEAGQSKNISQELNELSESYKEKVAKGEARWASSGYKGKGYTYDSSELNDS 482
Query: 403 KQLRKAQAKEYGFGEDKSDSEDVDEG 428
++L + + +E DS+D + G
Sbjct: 483 QKLAQLEKREALIEAGLLDSDDEEGG 508
>gi|344231977|gb|EGV63856.1| DEAD-domain-containing protein [Candida tenuis ATCC 10573]
Length = 809
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/266 (40%), Positives = 146/266 (54%), Gaps = 41/266 (15%)
Query: 57 LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQL--DLKIREK 114
L K K ++R+K E + IDY+ R+ FY +E +S ++ D+K++
Sbjct: 168 LSSKLKKLQEREKALETVDHS-SIDYKPFRRVFYKPPKEFESLSSDEITKIRQDIKVKGV 226
Query: 115 CAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLA 174
P PI W Q GL IL F LN+E P IQ A I+SG D + + +TGSGKTL+
Sbjct: 227 DCPLPITKWSQLGLPLSILSIFKTLNYETPSPIQCQALPTIMSGRDIIGVAKTGSGKTLS 286
Query: 175 FLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR-------------------- 214
F+LPM+RH+ +Q P+ G D P+ L++ PT EL Q +
Sbjct: 287 FVLPMIRHVQDQDPLQEG-DGPIALILTPTRELAFQVNKEISNFSKSVSSCCCYGGSSIE 345
Query: 215 -----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
GR+IDLL N ++TNL RVTYLVLDEADRM+DMGFEPQ+ +I
Sbjct: 346 SQIAELKKGVQVIVGTPGRVIDLLTVNSGRVTNLKRVTYLVLDEADRMYDMGFEPQVKKI 405
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILAR 283
+ +RPDRQ VLFS TFP ++E LA+
Sbjct: 406 ISQVRPDRQTVLFSATFPRKLEKLAK 431
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIY 345
++ IA S+ ARGLD K L+LVIN+DAP+ EDY+H ++ A FI+++
Sbjct: 544 DILIATSIAARGLDVKGLDLVINYDAPSHLEDYIHRVGRTGRAGKNGTAITFITDQQDRA 603
Query: 346 ATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQL 405
D++K + L +++ FIAKV G + + +G GG L ++++ K L
Sbjct: 604 IADIIKVLTPP---IDPRLNKISEEFIAKVKSG-KEKYSSGFGGKGLEKLQQQRDSTKDL 659
Query: 406 RKAQAKE 412
+ +E
Sbjct: 660 ERQTYEE 666
>gi|146419343|ref|XP_001485634.1| hypothetical protein PGUG_01305 [Meyerozyma guilliermondii ATCC
6260]
Length = 862
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 144/250 (57%), Gaps = 46/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+++Y +RK FYT E+ + P A R +D +K+R P PI+ W Q GL + I+
Sbjct: 219 QMEYTSVRKKFYTPPEELKDVPPEKVTALRTAMDGIKVRGSDCPMPIQKWAQLGLPSSIM 278
Query: 134 ETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
KL ++ P IQ+ A I+SG D + + TGSGKTLAF++P++RHI +QPP+ G
Sbjct: 279 TVLEEKLGYDTPSPIQSQALPAIMSGRDIIGVANTGSGKTLAFVIPLIRHIMDQPPLKSG 338
Query: 193 DDSPVGLVMAPTGELVRQ------------------------------QVRR-------- 214
D P+G+++ PT EL Q ++R
Sbjct: 339 -DGPIGVILTPTRELALQIQKELVNFTQAVELSVCCCYGGSPIESQIADLKRGTEIIVGT 397
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+IDLL NG ++TNL R T+LVLDEADRMFDMGFEPQ+ +++ IRPD+Q VLFS T
Sbjct: 398 PGRVIDLLAANGGRVTNLRRTTFLVLDEADRMFDMGFEPQVNKVLSQIRPDKQMVLFSAT 457
Query: 274 FPPRVEILAR 283
FP ++E LAR
Sbjct: 458 FPKKLESLAR 467
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 286 NVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL-----KSCAFRFISE 340
N + IA S+ ARGLD + L LVIN+DAP+ EDYVH ++ + S+
Sbjct: 572 NGLRVLIATSIAARGLDVRGLNLVINYDAPSHMEDYVHRVGRTGRAGATGTAVTLVLSSQ 631
Query: 341 ENAIYATDLVKAFELSELV--VRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL-NLMKR 397
E I DLV+A ++S V + +L+++AD F+ KV G + + +G GG L NL +R
Sbjct: 632 EREIR--DLVRAMKMSGKVDDIPAELQSIADKFLKKVKSGEEKFN-SGFGGKGLENLQER 688
Query: 398 RIRRGKQLRKAQAKEYG 414
R +R+ + + YG
Sbjct: 689 R----DNVREIEMQMYG 701
>gi|389747348|gb|EIM88527.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 688
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/250 (42%), Positives = 140/250 (56%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
++ Y+ RK FY +I M+ R +LD +KIR P+P+ W GL T +L
Sbjct: 50 RMSYEPFRKEFYMPPPDIAAMTDEEADLLRLELDSIKIRGVDCPRPVTKWSHFGLPTSVL 109
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +LN+ P +IQA A I+SG D + + +TGSGKT+AFLLP+ RHI +Q P+
Sbjct: 110 DVIKRLNYAAPTSIQAQAVPAIMSGRDVIGVAKTGSGKTVAFLLPVFRHIKDQRPL-EQM 168
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
+ P+ ++M PT EL Q R
Sbjct: 169 EGPIAIIMTPTRELAVQIHRDCKPFLKVLNLRAVCAYGGSPIKDQIADMKKGAEIIVCTP 228
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ +LFS TF
Sbjct: 229 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTLLFSATF 288
Query: 275 PPRVEILARK 284
P +++ LARK
Sbjct: 289 PKQMDSLARK 298
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 72/129 (55%), Gaps = 4/129 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVINFDAPN EDYVH ++ K FI+
Sbjct: 394 KAGVVPIVIATSVAARGLDVKQLKLVINFDAPNHMEDYVHRAGRTGRAGNKGTCITFITP 453
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN-LMKRRI 399
E Y+ D+ +A + S V +L+ +A+ F+ KV G G+G GG L+ L K R
Sbjct: 454 EQDRYSVDIYRALKASNANVPQELEELANGFLDKVKAGKAHAAGSGFGGKGLDRLDKERD 513
Query: 400 RRGKQLRKA 408
R K RKA
Sbjct: 514 AREKAERKA 522
>gi|336386298|gb|EGO27444.1| hypothetical protein SERLADRAFT_354747 [Serpula lacrymans var.
lacrymans S7.9]
Length = 914
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 147/276 (53%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPAYRKQLD-----LKIREKCAPKPIKTWRQTGLTTKIL 133
+I Y+ RK FY +I M+ + L +KIR PKP+ W GL L
Sbjct: 182 RIQYEPFRKEFYAPPPDIAAMTDEEAELLRLELDGIKIRGIDCPKPVTKWSHYGLPASCL 241
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +LN+ P AIQA A I+SG D + + +TGSGKT+AFLLP+ RHI +Q P+
Sbjct: 242 DVIKRLNYTAPTAIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQRPL-DQM 300
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
+ P+ +VM PT EL Q R
Sbjct: 301 EGPLAIVMTPTRELAVQIHRECRPFLRVMNLRAVCAYGGSPIKDQIAELKKGAEIIVCTP 360
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 361 GRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATF 420
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +++ LARK L I +V R + E+E ++
Sbjct: 421 PKQMDSLARKILRKPLEI--TVGGRSVVAAEIEQIV 454
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 6/134 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 526 KAGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 585
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ D+ +A + S V +L+ +A+ F+ K+ G Q G+G GG L+ + + R
Sbjct: 586 EQDRYSVDIYRALKASNASVSKELEDLANGFLEKLKSGKAQAAGSGFGGKGLDRLDKE-R 644
Query: 401 RGKQLRKAQAKEYG 414
K +A+ K YG
Sbjct: 645 EAKD--RAERKAYG 656
>gi|392576479|gb|EIW69610.1| hypothetical protein TREMEDRAFT_71685 [Tremella mesenterica DSM
1558]
Length = 1152
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/258 (42%), Positives = 142/258 (55%), Gaps = 45/258 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRM----SPAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KIDY+ RK FY E+ M + R +D +KIR + AP+P++ W GL + L
Sbjct: 442 KIDYEPFRKAFYNPPVEVLEMNEEETEMVRLMMDGIKIRGQDAPRPVRNWGAFGLPSGCL 501
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ E+P IQA A I+SG D + I +TGSGKT+AFLLP+ RH+ +Q PV G
Sbjct: 502 DVIRSKGWEHPTPIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPLFRHVKDQRPVG-GA 560
Query: 194 DSPVGLVMAPTGELVRQ------------QVR---------------------------R 214
+ P+ +VM+PT EL Q +R
Sbjct: 561 EGPIAIVMSPTRELALQIYTECKAFIKPLNIRVACCVGGVTISEDIALMKKGAEIVVCTP 620
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL NG ++TN+ R TY+VLDEADRMFDMGFEPQ+ +I+ N RPD Q VLFS TF
Sbjct: 621 GRMIDLLTANGGRVTNVRRTTYIVLDEADRMFDMGFEPQVMKIINNTRPDAQKVLFSATF 680
Query: 275 PPRVEILARKTNVCNLSI 292
P +E LAR+ V L I
Sbjct: 681 PKTMESLARRILVRPLEI 698
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A SV ARGLD KEL+LV+N+DAPN EDYVH ++ K FIS + ++ D
Sbjct: 797 VATSVAARGLDVKELKLVVNYDAPNHLEDYVHRAGRTGRAGNKGLCITFISPDQEKFSVD 856
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+V+A E S +V +LK ++++++AK+ GL + G+G G L
Sbjct: 857 IVRALEASNAIVPKELKEMSNTYLAKIKAGLAKAAGSGFKGKGL 900
>gi|395324143|gb|EJF56589.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1073
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 113/276 (40%), Positives = 145/276 (52%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPAYRKQLD-----LKIREKCAPKPIKTWRQTGLTTKIL 133
++ Y+ RK FY ++ M+ + L +KIR P+P+ W GL L
Sbjct: 368 RVAYEPFRKEFYVAPPDVAEMTDEEAELLRLELDGIKIRGLDCPRPVTKWSHFGLPASCL 427
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
E KL + P IQA A I+SG D + + +TGSGKT+AFLLPM RHI +Q P+ +
Sbjct: 428 EVIKKLGYAAPTPIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPLEQME 487
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
PV +VM PT EL Q R
Sbjct: 488 -GPVAVVMTPTRELAVQIHRECKPFLRVLGLRAVCAYGGSPIKDQIAEMKKGAEIIVCTP 546
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 547 GRMIDLLTANSGRVTNLKRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATF 606
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +++ LARK L I +V R + E+E ++
Sbjct: 607 PRQMDSLARKILRKPLEI--TVGGRSVVAPEIEQIV 640
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 98/175 (56%), Gaps = 6/175 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 712 KSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 771
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E Y+ D+ +A + S V +L+ +++ F+ KV G +V G+G GG L+ +++ R
Sbjct: 772 EQDRYSVDIYRALKASNAAVPKELEDLSNGFLEKVKSGKAKVAGSGFGGKGLDRLEQE-R 830
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSK 455
K+ KA+ K YG E++ ++ T+K G D++ + ++ A +SK
Sbjct: 831 DAKE--KAERKAYGEPEEEKQQQEAAVETKKEGDDMTFGNFKVEVKRGPAPDSSK 883
>gi|349602917|gb|AEP98907.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Equus caballus]
Length = 667
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 124/207 (59%), Gaps = 40/207 (19%)
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKPIK+W Q G++ KIL + K +E P IQ A I+SG D + I +TGSGKT+AFL
Sbjct: 3 PKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFL 62
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPM RHI +Q P+ G+ P+ ++M PT EL Q
Sbjct: 63 LPMFRHIMDQRPLEEGE-GPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGIS 121
Query: 211 ----QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++RG RMID+L N ++TNL RVTY+VLDEADRMFDMGFEPQ+ RI
Sbjct: 122 EQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI 181
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
V N+RPDRQ V+FS TFP +E LAR+
Sbjct: 182 VDNVRPDRQTVMFSATFPRAMEALARR 208
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 301 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 360
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 361 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 391
>gi|331214536|ref|XP_003319949.1| hypothetical protein PGTG_00861 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309298939|gb|EFP75530.1| hypothetical protein PGTG_00861 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1329
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 144/276 (52%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPIKTWRQTGLTTKIL 133
KI Y+ RK FY E+ MS + + +KIR + PKP+ W GL L
Sbjct: 603 KITYEPFRKAFYHPPAEVEEMSDEQAENIRIAMDGIKIRGQDCPKPVMKWSWFGLHAACL 662
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
E L +++P IQ A I+SG D + + +TGSGKTLAFLLPM RHI +Q P +
Sbjct: 663 EVVKSLGYQSPTPIQGQAVPAIMSGRDVIGVAKTGSGKTLAFLLPMFRHIKDQRP-LDAL 721
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
+ P+ ++M PT EL Q +
Sbjct: 722 EGPIAMIMTPTRELATQIYKEGRPFLKSLGLRAACAYGGSPLKDNIADMKRGAEVIVCTP 781
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMI+LL N ++ N+ RVTYLVLDEADRMFDMGFEPQ+ +IV IRPDRQ VLFS TF
Sbjct: 782 GRMIELLTTNSGRVINMRRVTYLVLDEADRMFDMGFEPQVMKIVNQIRPDRQTVLFSATF 841
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P ++E LARK L I +V R + E+E ++
Sbjct: 842 PKQMEALARKILRRPLEI--TVGGRSVVASEIEQIV 875
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 11/151 (7%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 947 KSGVTPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFIAP 1006
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
+ YA DL++A S ++LK ++DSF+ K+ G Q G+G GG L+ +++
Sbjct: 1007 DQERYAVDLLRALVTSGAKYPEELKTMSDSFLEKIKSGKAQASGSGFGGKGLDRLEK--- 1063
Query: 401 RGKQLRKAQAKEYGFGE---DKSDSEDVDEG 428
+ K++A+ +GE +++ E+V G
Sbjct: 1064 --DRDAKSRAERSAYGEPGGEEASKEEVGTG 1092
>gi|409079813|gb|EKM80174.1| hypothetical protein AGABI1DRAFT_57683 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 864
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 152/282 (53%), Gaps = 47/282 (16%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+I Y+ RK FY +I M+ R +LD +KIR P+P+ W G+ L
Sbjct: 152 RIHYEPFRKEFYVPPPDIAHMTDDEAELLRLELDSIKIRGIDCPRPVTKWSHFGMPANCL 211
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +LN+ P +IQA A I+SG D + + +TGSGKT+AFL+P+ RHI +Q P+ +
Sbjct: 212 DVIKRLNYTAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLMPLFRHIKDQRPLEQME 271
Query: 194 DSPVGLVMAPTGEL---------------------------VRQQVRR------------ 214
P+ +VM PT EL ++ Q+
Sbjct: 272 -GPIAVVMTPTRELAVQIHKDCKPFLKVLGLRAVCAYGGSPIKDQIAELKKGAEIIVCTP 330
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +IV N RPDRQ VLFS TF
Sbjct: 331 GRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIVNNTRPDRQTVLFSATF 390
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPN 316
P +++ LARK L I +V R + E+E ++ A +
Sbjct: 391 PKQMDSLARKILRKPLEI--TVGGRSVVAAEIEQIVEVRAED 430
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 78/144 (54%), Gaps = 8/144 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN DAPN EDYVH ++ K FI+
Sbjct: 496 KSGVVPIVIATSVAARGLDVKQLKLVINHDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 555
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN-LMKRRI 399
E Y+ D+ +A + S + +L+ +A+ F+ KV G Q G+G GG L+ L K R
Sbjct: 556 EQDRYSVDIHRALKASNASIPQELEDLANGFLEKVKSGKAQAAGSGFGGKGLDRLDKERD 615
Query: 400 RRGKQLRKAQAKEYGFGEDKSDSE 423
R K RKA YG D+ E
Sbjct: 616 AREKAERKA----YGEPTDEDKPE 635
>gi|426198422|gb|EKV48348.1| hypothetical protein AGABI2DRAFT_191977 [Agaricus bisporus var.
bisporus H97]
Length = 1063
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 151/280 (53%), Gaps = 47/280 (16%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+I Y+ RK FY +I M+ R +LD +KIR P+P+ W G+ L
Sbjct: 351 RIHYEPFRKEFYVPPPDIAHMTDDEAELLRLELDSIKIRGIDCPRPVTKWSHFGMPANCL 410
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +LN+ P +IQA A I+SG D + + +TGSGKT+AFL+P+ RHI +Q P+ +
Sbjct: 411 DVIKRLNYTAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLMPLFRHIKDQRPLEQME 470
Query: 194 DSPVGLVMAPTGEL---------------------------VRQQVRR------------ 214
P+ +VM PT EL ++ Q+
Sbjct: 471 -GPIAVVMTPTRELAVQIHKDCKPFLKVLGLRAVCAYGGSPIKDQIAELKKGAEIIVCTP 529
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +IV N RPDRQ VLFS TF
Sbjct: 530 GRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIVNNTRPDRQTVLFSATF 589
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDA 314
P +++ LARK L I +V R + E+E ++ A
Sbjct: 590 PKQMDSLARKILRKPLEI--TVGGRSVVAAEIEQIVEVRA 627
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 78/144 (54%), Gaps = 8/144 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN DAPN EDYVH ++ K FI+
Sbjct: 695 KSGVVPIVIATSVAARGLDVKQLKLVINHDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 754
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN-LMKRRI 399
E Y+ D+ +A + S + +L+ +A+ F+ KV G Q G+G GG L+ L K R
Sbjct: 755 EQDRYSVDIHRALKASNASIPQELEDLANGFLEKVKSGKAQAAGSGFGGKGLDRLDKERD 814
Query: 400 RRGKQLRKAQAKEYGFGEDKSDSE 423
R K RKA YG D+ E
Sbjct: 815 AREKAERKA----YGEPTDEDKPE 834
>gi|358054949|dbj|GAA99016.1| hypothetical protein E5Q_05705 [Mixia osmundae IAM 14324]
Length = 1170
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 183/381 (48%), Gaps = 83/381 (21%)
Query: 6 TKQLPVVQI-------EIDPLDAFMNDMECSFAEHPNNCFRLGRRL-----PAEDS---- 49
TK P V + EIDPLDAFM + + N + R L P E++
Sbjct: 391 TKSAPTVSVTEPEEDDEIDPLDAFMTGVTEQVKQV--NASDIARSLGGAPPPKEETVMNL 448
Query: 50 --------HSASDYE--------LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQA 93
+YE + AKK K+ + S+IK Y+ RK FY
Sbjct: 449 DEDAGDDDGEPDEYEKAGLRPEDILALAAKKLKKKDLAPVDHSRIK--YESFRKAFYHPP 506
Query: 94 REITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQ 148
EI M+ R +LD +KIR PKPI W GL L+ +L++ +P IQ
Sbjct: 507 PEIAAMTEEEATVLRGELDAIKIRGADYPKPITKWSHCGLPAICLDVIRQLDYASPTPIQ 566
Query: 149 APASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELV 208
A A I+SG D + + +TGSGKT+AFLLPM RHI +Q P+ + P+ ++M PT EL
Sbjct: 567 AQAIPSIMSGRDMIGVAKTGSGKTIAFLLPMFRHIKDQRPLEMM-EGPIAMIMTPTRELA 625
Query: 209 RQQVRR---------------------------------------GRMIDLLCKNGVKIT 229
Q R GRMI+LL N ++
Sbjct: 626 NQIYRECKPFLKALNLRAICSYGGSPLKDNINDLKKGAEVIVCTPGRMIELLGTNSGRLV 685
Query: 230 NLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCN 289
NL R+TYLVLDEADRMFDMGFEPQ+ +I+ +RPDRQ VLFS TFP ++E LARK
Sbjct: 686 NLRRITYLVLDEADRMFDMGFEPQVMKIISQVRPDRQTVLFSATFPRQMEALARKVLKKP 745
Query: 290 LSIANSVRARGLDEKELELVI 310
L I +V R + E+E +I
Sbjct: 746 LEI--TVGGRSVVAAEIEQII 764
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 4/121 (3%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KS 332
R +++A+ K + + +A SV ARGLD K L+LV+NFD PN EDYVH ++ K
Sbjct: 828 RDDVIAQFKQGIFQVVVATSVAARGLDVKGLKLVVNFDCPNHLEDYVHRAGRTGRAGNKG 887
Query: 333 CAFRFISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
FI+++ Y+ DLVKA E S V DL+ +A F+ KV G +G GG L
Sbjct: 888 TCVTFITKDQDRYSMDLVKALENSNAPVPADLRKMAADFLQKVKDGNATTASSGFGGKGL 947
Query: 393 N 393
+
Sbjct: 948 D 948
>gi|50548003|ref|XP_501471.1| YALI0C05368p [Yarrowia lipolytica]
gi|74660055|sp|Q6CCZ1.1|PRP5_YARLI RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|49647338|emb|CAG81772.1| YALI0C05368p [Yarrowia lipolytica CLIB122]
Length = 974
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 165/326 (50%), Gaps = 60/326 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKK----KKRDKN 70
E+DPLDA+M+ + + P E+ + + K K
Sbjct: 266 EVDPLDAYMSSLTLPT----TTSVSIADSTPLENLNVWEQVDTLEKSQDPTLDLSALSKR 321
Query: 71 REI-IKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLDL-----KIREKCAPKPIKTWR 124
+EI I K Y+ R+ FY ++ E+ M+ A +L L KIR K PKPI W
Sbjct: 322 KEIAIVDHSKQVYEDFRRQFYVESSELADMTEAETNELRLSLDGIKIRGKDCPKPISKWT 381
Query: 125 QTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIW 184
Q GL + + L ++ P +IQA A ++SG D +++ +TGSGKTLAFLLPMLRHI
Sbjct: 382 QLGLPGPTMGVLNDLRYDKPTSIQAQAIPAVMSGRDVISVAKTGSGKTLAFLLPMLRHIK 441
Query: 185 EQPPV------VPGDDS-PVGLVMAPTGELVRQQVRR----------------------- 214
+ V + G S P+G+++ PT EL Q R
Sbjct: 442 HRVGVETHTTTLSGASSHPLGVIITPTRELCVQIYRDLRPFLAALELTAVCAYGGSPIKD 501
Query: 215 ----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
GRMIDLL N ++ +L+RVT+LV+DEADRMFDMGFEPQ+ ++
Sbjct: 502 QIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFDMGFEPQVLKLT 561
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARK 284
Q+IRPDRQ VLFS TFP ++E LAR+
Sbjct: 562 QSIRPDRQTVLFSATFPKKMEQLARR 587
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + ++ IA SV ARGLD K L LV+N+D+PN EDYVH ++ K A F+
Sbjct: 711 KSGLVSVLIATSVAARGLDVKGLGLVVNWDSPNHMEDYVHRVGRTGRAGQKGTALTFLLS 770
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMK--RR 398
+ A ++ +A + S ++ + + F KV G + H G G L ++ R
Sbjct: 771 DQERLAAEISRAIKSSGNAPPAPVQLMTERFEFKVRSGTEKRHMYGFSGKGLERLQDERD 830
Query: 399 IRRGKQLRKAQAKEYGFGEDKSDS 422
R + R + E G E +S +
Sbjct: 831 ATREHERRAYEGDEAGEAETESST 854
>gi|443926925|gb|ELU45471.1| DEAD/DEAH box RNA helicase [Rhizoctonia solani AG-1 IA]
Length = 1540
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 112/276 (40%), Positives = 148/276 (53%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KI Y+ RK FY ++ M+ R LD +KIR PKP+ W GL + L
Sbjct: 853 KIKYEPFRKAFYHPPPDVAAMTDDEADLLRLSLDGIKIRGLDCPKPVTKWSHCGLPSSCL 912
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +L + P +IQ+ A I+SG D + + +TGSGKT+AFLLP+ RHI +Q P+ +
Sbjct: 913 DVIKRLGYTAPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQRPLETME 972
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
P+ +VM PT EL Q R
Sbjct: 973 -GPMAIVMTPTRELAVQIHRECKPFLKVLNLRAVCAYGGSPIKDQIAEMKKGCEIIVCTP 1031
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +IV NIRPDRQ VLFS TF
Sbjct: 1032 GRMIDLLTANSGRVTNLRRVTYLVLDEADRMFDMGFEPQVMKIVNNIRPDRQTVLFSATF 1091
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +++ LARK L I +V R + E++ ++
Sbjct: 1092 PKQMDSLARKILRKPLEI--TVGGRSVVAAEIDQIV 1125
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 14/135 (10%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 1197 KAGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 1256
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVH-GTGHGGVALNLMKRRI 399
E Y+ D+ +A E S+ + DL+ + V G Q + G G GG L+ +
Sbjct: 1257 EQERYSVDIFRALEASKATIPSDLEEL-------VKAGKAQSYVGAGFGGKGLDKFDQE- 1308
Query: 400 RRGKQLRKAQAKEYG 414
R K+ +AQ YG
Sbjct: 1309 RDAKE--RAQRAAYG 1321
>gi|405118430|gb|AFR93204.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Cryptococcus
neoformans var. grubii H99]
Length = 1071
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/273 (40%), Positives = 145/273 (53%), Gaps = 48/273 (17%)
Query: 79 KIDYQQLRKNFYT----QAREITRMSPAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
KIDY+ RK FY + R ++D +KIR + APKP++ W GL L
Sbjct: 355 KIDYEPFRKAFYVPPVEVMEMDEEEAELVRLEMDGIKIRGQDAPKPVRNWGAFGLPQGCL 414
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ E P +IQA A I+SG D + I +TGSGKT+AFLLPMLRH+ +Q PV G
Sbjct: 415 DVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPMLRHVRDQRPVS-GS 473
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
+ P+ +VM+PT EL Q +
Sbjct: 474 EGPIAVVMSPTRELATQIYKECQPFLKVLNIRASCCVGGSSISEDIAAMKKGAEVVICTP 533
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TN+ R TY+V+DEADRMFDMGFEPQ+ +I+ N+RP Q VLFS TF
Sbjct: 534 GRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNVRPSAQKVLFSATF 593
Query: 275 PPRVEILARKTNVCNLSI---ANSVRARGLDEK 304
P +E LAR+ V L I SV A +D++
Sbjct: 594 PKTMESLARRILVKPLEITVGGRSVVAPEIDQR 626
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A SV ARGLD KEL+LVIN+DAPN EDYVH ++ K FI+ E ++ D
Sbjct: 710 VATSVAARGLDVKELKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVD 769
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+V+A E S+ + DDLK ++DSF+ K+ G + G+G+ G L
Sbjct: 770 IVRALEASKAFIPDDLKKMSDSFLGKIKSGKARAAGSGYSGKGL 813
>gi|170091070|ref|XP_001876757.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648250|gb|EDR12493.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 661
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/276 (39%), Positives = 151/276 (54%), Gaps = 47/276 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
++ Y+ RK FY +I M+ R +LD +KIR PKP+ W GL L
Sbjct: 33 RVRYEPFRKEFYIPPPDIAAMTEEEAEFLRLELDSIKIRGIDCPKPVTKWSHFGLPANCL 92
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +LN+ P +IQA A I+SG D + + +TGSGKT+AFLLP+ RHI +Q +
Sbjct: 93 DVIKRLNYTAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQRSL-EQM 151
Query: 194 DSPVGLVMAPTGEL---------------------------VRQQVRR------------ 214
+ P+ +VM PT EL ++ Q+
Sbjct: 152 EGPIAVVMTPTRELAVQIHKECKAFLKVLNLRAVCAYGGSPIKDQIAELKKGAEIIVCTP 211
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TF
Sbjct: 212 GRMIDLLTANSGRVTNLKRVTYVVLDEADRMFDMGFEPQVMKIINNIRPDRQTVLFSATF 271
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +++ LARK + + + +V R + E+E ++
Sbjct: 272 PKQMDSLARK--ILHKPLEITVGGRSVVAAEIEQIV 305
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 98/179 (54%), Gaps = 6/179 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ K FI+
Sbjct: 377 KSGVVPIVIATSVAARGLDVKQLKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCVTFITP 436
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN-LMKRRI 399
E Y+ D+ +A + S + DL+ +A+ F+ K+ G Q G+G GG L+ L K R
Sbjct: 437 EQERYSVDIYRAVKASNATIPKDLEELANGFLDKLKTGKAQAAGSGFGGKGLDRLDKERD 496
Query: 400 RRGKQLRKAQAKEYGFGEDKSDSEDV-DEGTRKSGGDISHQDSIAKIATIAAASNSKAS 457
R K RKA E G + + +E++ + T SG D++ + +I A +SKA+
Sbjct: 497 AREKAERKAYG-EPGEEDKPTPAEEMAAKATASSGDDMTFGNFKVEIKRGPAPDSSKAN 554
>gi|428671738|gb|EKX72653.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 942
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 146/276 (52%), Gaps = 45/276 (16%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRK-QLDLKIREKCAPKPIKTWRQTGLTTKIL 133
KIDY KNFY Q IT M A+RK +++IR K P+PI ++ Q GL IL
Sbjct: 299 KIDYLPFNKNFYVQVSAITAMKEHEVDAFRKTNGNIRIRGKQCPRPIYSFSQCGLPDPIL 358
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K +E P IQ ++ G D + I ETGSGKTLAFLLP +RH+ +QP + D
Sbjct: 359 SLLQKREYEKPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPAIRHVLDQPKLREMD 418
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRRG-------- 215
V L+++PT EL Q ++RG
Sbjct: 419 GMIV-LIISPTRELTIQISKECSKLCKTVDLRVVAVYGGAGIGKQLNSLKRGAEIVCGTP 477
Query: 216 -RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
R+ID+L + K+TNL RVT+LVLDEADRMFDMGF PQIT I+ NIRPDRQ LFS TF
Sbjct: 478 GRLIDVLTTSKGKVTNLRRVTFLVLDEADRMFDMGFSPQITAIIDNIRPDRQTALFSATF 537
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
PP +E LA+K L I R + + + +VI
Sbjct: 538 PPVIENLAKKILTKPLQIIVGERGKSASQVDQHVVI 573
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 94/201 (46%), Gaps = 23/201 (11%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
I+ S+ ARG+D K + LVIN+ AP+ +EDYVH ++ ++ F++ E A + D
Sbjct: 648 ISTSIAARGIDVKSVVLVINYAAPDHFEDYVHRVGRTGRAGNFGTSYTFLAPEEASKSHD 707
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKA 408
+++A +L+ V ++L +A + +A V+ G G G +R R +Q R+
Sbjct: 708 IIRALKLANQDVPEELTQLAQAHLATVDSKQRFKGGFGGKGFKFTDAER--SRQQQERRN 765
Query: 409 QAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASASTPSLISVAQ 468
KE GFG D ED DE DS IA A S A + S VA+
Sbjct: 766 ACKELGFGND----EDEDE-----------PDSTPMIANAIAQS---AKTALQSAKEVAK 807
Query: 469 LLPNGGPSIPLPGVLGLSVPG 489
+ P P + GLS G
Sbjct: 808 QYEKSYLNQPTPMIKGLSCAG 828
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 120/308 (38%), Positives = 161/308 (52%), Gaps = 52/308 (16%)
Query: 52 ASDYELFMKRAKKKKRDKNREIIK-SKIKIDYQQLRKNFYTQAREITRMSP----AYRK- 105
S+Y + + K K RE+ + KI+Y +KNFY Q IT MS A+RK
Sbjct: 275 GSEYTELLAKIKSK-----RELPRVDHTKIEYMPFKKNFYVQVSSITNMSEHEVDAFRKA 329
Query: 106 QLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAIT 165
+++ K P+PI ++ Q GL IL + ++E P IQ ++ G D + I
Sbjct: 330 NGSIRVYGKKCPRPISSFSQCGLPDPILSILQRRDYEKPFPIQMQCIPALMCGRDVIGIA 389
Query: 166 ETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------- 210
ETGSGKTLAFLLP +RH +QP + +D + L++APT EL+ Q
Sbjct: 390 ETGSGKTLAFLLPAIRHALDQPKLRE-NDGMIVLIIAPTRELIMQISNECSKLSKSVGLK 448
Query: 211 ---------------QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246
++RG R+ID+L + K+TNL RVT+LVLDEADRMF
Sbjct: 449 TLCVYGGAGIGEQLNALKRGAEIVCGTPGRLIDVLTISNGKVTNLRRVTFLVLDEADRMF 508
Query: 247 DMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKEL 306
DMGF PQIT IV+NIRPDRQ LFS TFP +E LA+K L I R + + +
Sbjct: 509 DMGFSPQITAIVENIRPDRQTALFSATFPTSIENLAKKILSKPLQIIVGQRGKSASQVDQ 568
Query: 307 E-LVINFD 313
LVIN D
Sbjct: 569 HVLVINED 576
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
IA S+ ARG+D K + LVIN+ AP+ +EDYVH ++ ++ F++ E A + D
Sbjct: 647 IATSIAARGIDVKSVVLVINYAAPDHFEDYVHRVGRTGRAGTIGTSYTFLTPEEAPKSHD 706
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVN 376
++KA L+ V +L ++ + +A ++
Sbjct: 707 IIKALRLASQEVPKELLQISQAHLATMD 734
>gi|294875381|ref|XP_002767294.1| RNA helicase-1, putative [Perkinsus marinus ATCC 50983]
gi|239868857|gb|EER00012.1| RNA helicase-1, putative [Perkinsus marinus ATCC 50983]
Length = 1227
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/251 (41%), Positives = 141/251 (56%), Gaps = 45/251 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPIKTWRQTGLTTKIL 133
KI+Y ++KN Y Q REI+ M QL D+++R K P+PIK++ GL +IL
Sbjct: 449 KIEYYPIKKNLYKQVREISNMPEHEVAQLRQSNGDIRVRGKHCPRPIKSFAMAGLDVRIL 508
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ P IQ A ++ G D +AI TGSGKTLA+LLPM+RH+ QPP+ +
Sbjct: 509 RMLDRKGITTPFPIQMQAIPALLCGRDVIAIAPTGSGKTLAYLLPMVRHVMAQPPLF-FN 567
Query: 194 DSPVGLVMAPTGELVRQ---------------------------QVRR------------ 214
+ P+GLV+APT EL Q Q+ +
Sbjct: 568 EGPIGLVIAPTRELALQINEQAEALCHAVNLKCACAYGGGIMGPQLSKLKAGCHILVATP 627
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+ID+L + K+TNL RV+ + LDEADRMFDMGFEPQI+ +++NI P RQ +FS TF
Sbjct: 628 GRLIDVLTLSNGKVTNLRRVSTVTLDEADRMFDMGFEPQISMVLRNINPARQTCMFSATF 687
Query: 275 PPRVEILARKT 285
PP VE LAR++
Sbjct: 688 PPHVEGLARQS 698
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 4/101 (3%)
Query: 283 RKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFI- 338
RK N+ +A SV ARGLD K VIN+ P+ EDYVH ++ A+ I
Sbjct: 793 RKPPPANILLATSVAARGLDVKHCICVINYTPPDHAEDYVHRVGRTGRAGNVGFAYTLIN 852
Query: 339 SEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGL 379
S YA++LV+ + + V DL +A + ++ GL
Sbjct: 853 SSTEGEYASELVEVLKAASQEVPADLVTLAQNNQVSISAGL 893
>gi|367010490|ref|XP_003679746.1| hypothetical protein TDEL_0B04060 [Torulaspora delbrueckii]
gi|359747404|emb|CCE90535.1| hypothetical protein TDEL_0B04060 [Torulaspora delbrueckii]
Length = 847
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 178/342 (52%), Gaps = 61/342 (17%)
Query: 16 IDPLDAFMNDMECS----------FAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKK 65
IDPL+A+M ++ S E N L + D + D + + AK K
Sbjct: 140 IDPLEAYMKELSSSAKISNHVSGELLEEDGNDLELSGQEDDFDQRNEDDAR-YARMAKLK 198
Query: 66 KRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPI 120
+ K RE+ S+ D + RKNFY Q+ E+ MS + ++L ++K++ + P P+
Sbjct: 199 SKKKVREMQFSQD--DLEPFRKNFYLQSDELNNMSESEAQELRLAIGNIKVKGERCPLPV 256
Query: 121 KTWRQTGLTTKILE-TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM 179
W Q GL T ++ L +++P IQ+ A I+SG D + I+ TGSGKT+++LLP+
Sbjct: 257 TRWSQLGLMTDVMNFIMHNLKYDSPTPIQSQAIPAIMSGRDVIGISRTGSGKTISYLLPL 316
Query: 180 LRHIWEQPPVVPGDDSPVGLVMAPTGEL----------------------------VRQQ 211
LR I Q P+ + P+GL++APT EL ++QQ
Sbjct: 317 LRQIKAQRPLATNETGPLGLILAPTRELALQIHEEVELFTKNDLAVNSLCCTGGSELKQQ 376
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+ GR IDLL N K+ R+T++VLDEADR+FD+GFEPQIT+I++
Sbjct: 377 INMLKRGTEIVVATPGRFIDLLTLNTGKLLTTKRITFVVLDEADRLFDLGFEPQITQIMK 436
Query: 260 NIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
IRPD+Q VLFS TFP ++ A + V L ++ ++ ++ L
Sbjct: 437 TIRPDKQCVLFSATFPNKLRSFAMR--VLRLPLSITINSKNL 476
>gi|150863984|ref|XP_001382645.2| pre-mRNA processing RNA-helicase [Scheffersomyces stipitis CBS
6054]
gi|158514823|sp|A3LQ55.2|PRP5_PICST RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|149385240|gb|ABN64616.2| pre-mRNA processing RNA-helicase [Scheffersomyces stipitis CBS
6054]
Length = 875
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 172/327 (52%), Gaps = 60/327 (18%)
Query: 15 EIDPLDAF---MNDMECSFAEHPNNCFRLGRRLPAEDSHSASD---------YELFMKRA 62
+ID LD F ++ E S + P+ +L E+ + D EL +
Sbjct: 151 KIDELDDFIASLSKQESSSNDIPSQIIE-DEQLEVENEGDSEDEEIDQDKKQQELLSSKF 209
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAP 117
+K + +K E I ++Y RKNFY + EI + + R +LD +K+ P
Sbjct: 210 QKLQNEKQLETIDHST-MNYSDFRKNFYQEPSEIQNWTAEQVESIRLELDGIKVAGSNVP 268
Query: 118 KPIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
+P+ W GL + KL ++ P +IQ+ A I+SG D + + +TGSGKTL+F+
Sbjct: 269 RPVLKWSHLGLPASYMNIIEDKLEYKAPTSIQSQALPAIMSGRDIIGVAKTGSGKTLSFV 328
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPMLRHI +QP + G + P+GL+++PT EL Q
Sbjct: 329 LPMLRHIQDQPDLKDG-EGPIGLILSPTRELAVQIHKEITNFTKRLGMTACCCYGGSPIE 387
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++++ GR+I+LL N +ITNL RVTY+VLDEADRMFD+GFEPQ+T+I
Sbjct: 388 SQIAELKKGAQILVGTPGRIIELLAANSGRITNLRRVTYVVLDEADRMFDLGFEPQVTKI 447
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
IRP+ Q VLFS TFP ++E+LA++
Sbjct: 448 SSQIRPESQTVLFSATFPRKIELLAKR 474
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 281 LARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRF 337
+ K + ++ IA S+ ARGLD K L+LVIN+D PN EDYVH ++ +K A F
Sbjct: 576 FSSKDSGVDILIATSIAARGLDVKGLDLVINYDPPNHMEDYVHRVGRTGRAGMKGTAITF 635
Query: 338 ISEENAIYATDLVKAFELSEL---VVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNL 394
+S + TDLV+A +S++ + L + + F+ KV G + + G GG L
Sbjct: 636 VSSDQERSVTDLVRAMTMSKIPEDEIPSRLIEIRNQFLEKVKAGKFK-YSFGFGGKGLEK 694
Query: 395 MKRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGG 434
+ ++IR R Q KEYG +D +DV+ K+ G
Sbjct: 695 L-QQIR--DSTRSLQKKEYG----PNDDDDVNFVADKTNG 727
>gi|254571525|ref|XP_002492872.1| RNA helicase in the DEAD-box family, necessary for prespliceosome
formation [Komagataella pastoris GS115]
gi|238032670|emb|CAY70693.1| RNA helicase in the DEAD-box family, necessary for prespliceosome
formation [Komagataella pastoris GS115]
gi|328353117|emb|CCA39515.1| ATP-dependent RNA helicase DDX46/PRP5 [Komagataella pastoris CBS
7435]
Length = 784
Score = 181 bits (458), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/261 (39%), Positives = 144/261 (55%), Gaps = 45/261 (17%)
Query: 67 RDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKT 122
++KN+++IK I+ + K FYT+ I+ + A R ++KIR K +PI
Sbjct: 158 KNKNKKVIKF-IEPSTEPFEKQFYTEPESISSLPETDVQAIRAIHNIKIRGKHIQRPITE 216
Query: 123 WRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRH 182
W Q L + + L +E P IQ+ A ++SG D + I +TGSGKTLAFLLPM R
Sbjct: 217 WCQLALPQQFMSVIEDLKYEAPTPIQSEALPNLMSGKDLIGIAKTGSGKTLAFLLPMFRQ 276
Query: 183 IWEQPPVVPGDDSPVGLVMAPTGEL---------------------------VRQQVRR- 214
I QP G+ P+G+++ PT EL + QQ+
Sbjct: 277 IISQPDPESGE-GPIGVILTPTRELALQIFKECKPFMKSLNLKGICVYGGASISQQISDI 335
Query: 215 -----------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRP 263
GR+IDLL N ++TNL+R +YLVLDEADRMFDMGFEPQ+ +I+ N RP
Sbjct: 336 KKRVHFAVCTPGRLIDLLTANSGRVTNLSRTSYLVLDEADRMFDMGFEPQVMKIIPNTRP 395
Query: 264 DRQAVLFSPTFPPRVEILARK 284
DRQ ++FS TFPP++E LA+K
Sbjct: 396 DRQTLVFSATFPPKMEALAKK 416
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC---AFRFISE 340
KT ++ +A SV ARGLD K L LVIN+D+PN EDYVH ++ A F++
Sbjct: 512 KTGNSDILVATSVAARGLDVKRLNLVINYDSPNHMEDYVHRVGRTGRAGSTGEAVTFLTA 571
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++ A D+ +A ++S+ +V D+++AVA+ FI ++ G + G+G+GG L ++
Sbjct: 572 KDYRAAYDVSRALKVSKQLVPDNVQAVANVFIEQLKTGSAK-RGSGYGGKGLEKLQEERE 630
Query: 401 RGKQLRKA 408
+QL K
Sbjct: 631 LKRQLEKT 638
>gi|440794934|gb|ELR16079.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 972
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 142/259 (54%), Gaps = 45/259 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
KI Y RK+ Y + E+ +M+ + D+ + + +K + Q GL++KI
Sbjct: 206 KIAYIPFRKDLYIEVPELKKMT-----KEDVVQYRRDQLEDLKDFSQCGLSSKIYAVMKH 260
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ E P IQA A I+SG D + +TGSGKTLAFLLPMLRHI +QP + PG + P+G
Sbjct: 261 SSFEKPTPIQAQAIPAIMSGRDLIGCAKTGSGKTLAFLLPMLRHILDQPHLEPG-EGPIG 319
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
L+MAPT EL Q Q+ + GRMID
Sbjct: 320 LIMAPTRELALQIHRDAKKFCKGIGLRSICVYGGSVVADQISKLKAGAEIVVCTPGRMID 379
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L N +I NL RVT++VLDEADRMFDMGFEPQI +I++N+RPDRQ V+FS TFP VE
Sbjct: 380 ILSTNSGRICNLRRVTFVVLDEADRMFDMGFEPQIMKILENVRPDRQTVMFSATFPRPVE 439
Query: 280 ILARKTNVCNLSIANSVRA 298
ARK L I R+
Sbjct: 440 TAARKILQKPLEIVVGTRS 458
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A SV ARGLD +L LV+N+D PN EDYVH ++ K A+ F++++ YA D
Sbjct: 545 VATSVVARGLDVPDLNLVVNYDCPNHMEDYVHRVGRTGRAGRKGWAYTFVTDDEDKYAPD 604
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKA 408
LVKA E S V + LK +AD F++K GL + HG+G GG + + K RK
Sbjct: 605 LVKALEQSGASVPESLKKLADDFLSKQKAGLAKAHGSGFGGKGFQFNESEANKKKAERKR 664
Query: 409 QAK 411
Q K
Sbjct: 665 QRK 667
>gi|407041039|gb|EKE40492.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 716
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/336 (33%), Positives = 165/336 (49%), Gaps = 72/336 (21%)
Query: 16 IDPLDAFMNDMECSFAEHPNNCFRLGRRLP---------------------AEDSHSASD 54
+D D FMN ME A+ N + L A DS +D
Sbjct: 5 VDDFDTFMNQMEEESAQQVNEAMGRLKELKGNEIKEIEKEEKEENEGKKEEARDSEDLAD 64
Query: 55 YELFMKRAKKKKRDKNREIIKSKIK-IDYQQLRKNFYTQAREITRMSPAYRKQLDLKIRE 113
Y+ + + KKKK E++ K I Y+ + K Y + +I +++ K++ E
Sbjct: 65 YKDELAQIKKKKL----ELLDVDHKNIQYEPIHKALYVEVPDIKKLTKEEVKEIRRVELE 120
Query: 114 KC------APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITET 167
C PKPI+TW + G+ ++ L +E P +Q A +I+SG D++ +T
Sbjct: 121 GCIVKGKNCPKPIRTWSECGINPITMDVIKALKYEKPSPVQRQAIPVIMSGYDAIVCAKT 180
Query: 168 GSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------- 210
GSGKTLA+ +P+++H+ Q P+ G + P+G+V AP EL Q
Sbjct: 181 GSGKTLAYTIPLIKHVMAQRPLSKG-EGPIGIVFAPIRELAEQINTEINKFGKYLNIRSV 239
Query: 211 -------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDM 248
++R GRMID+L N +ITNL RVT++VLDEADRMFDM
Sbjct: 240 AVFGGTGISNQIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVVLDEADRMFDM 299
Query: 249 GFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
GF PQI RI++ IRPD+Q V+FS TFP VE AR+
Sbjct: 300 GFGPQIKRIIEGIRPDKQIVMFSATFPISVEQHARE 335
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
I S+ ARGLD K LELVIN+D PN EDYVH ++ + A FI++E Y+ D
Sbjct: 438 ITTSLCARGLDVKGLELVINYDCPNHLEDYVHRVGRTGRAGKRGKAITFITKEEERYSED 497
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHG-TGHGG 389
+VKA LS + +L + + + K L L G G+GG
Sbjct: 498 IVKALTLSGGSISKELNDMYEEWKTK-KLFLETKEGKKGYGG 538
>gi|255732942|ref|XP_002551394.1| hypothetical protein CTRG_05692 [Candida tropicalis MYA-3404]
gi|240131135|gb|EER30696.1| hypothetical protein CTRG_05692 [Candida tropicalis MYA-3404]
Length = 880
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 142/250 (56%), Gaps = 47/250 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+Y+ +RK+FY + E++ +SP R++LD K+ P+P+ W L + I
Sbjct: 243 NYEPVRKSFYQEPYELSSLSPEDVITMRQELDNTKVHGIDVPRPVLKWGHLSLPSNISSV 302
Query: 136 F-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P +IQ+ A I+SG D + I +TGSGKTL+++LPM+RHI +Q + ++
Sbjct: 303 IHDKLKFEKPSSIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMIRHIQDQRKL-ESNE 361
Query: 195 SPVGLVMAPTGELVRQ----------------------------QVRR------------ 214
P+GL+++PT EL Q Q+
Sbjct: 362 GPIGLILSPTRELALQIQKEILHFTKDNPNLRVCCCYGGASIESQINELKKGVEIVVATP 421
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL R TY+VLDEADRMFD+GFEPQ+T+I IRPD+Q VLFS TF
Sbjct: 422 GRMIDLLAANSGRVTNLKRTTYVVLDEADRMFDLGFEPQVTKIFTQIRPDKQTVLFSATF 481
Query: 275 PPRVEILARK 284
P ++E+LA+K
Sbjct: 482 PKKMEVLAKK 491
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIY 345
N+ +A SV ARGLD K L LVINFD PN EDYVH ++ K A F+
Sbjct: 601 NILVATSVAARGLDVKSLGLVINFDPPNHMEDYVHRVGRTGRAGSKGQAITFVCSNQERE 660
Query: 346 ATDLVKAFELSELVVRDDLKAVADSFIAKVNLG 378
T LVKA LS+ V DL A+AD F+ KV G
Sbjct: 661 ITSLVKALRLSKAEVDPDLAAIADKFLCKVKSG 693
>gi|430813292|emb|CCJ29345.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 618
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/228 (41%), Positives = 135/228 (59%), Gaps = 37/228 (16%)
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q GL +L+ LN++ P AIQA A I+SG D + + +TGSGKT+AFL
Sbjct: 5 PKPVQNWSQCGLPAHVLDIIYHLNYQKPTAIQAQAIPAIMSGRDVIGVAKTGSGKTIAFL 64
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------Q 211
LPM RHI +Q P + + P+ L+M PT EL Q +
Sbjct: 65 LPMFRHIKDQRP-IDSLEGPIALIMTPTRELAVQIHKECKHFLKAVCAYGGSPIKDQIAE 123
Query: 212 VRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIR 262
++R GR+IDLL N ++TNL R +Y+VLDEADRMFD+GFEPQ+ ++V N+R
Sbjct: 124 LKRGAEIVVCTPGRIIDLLGANQGRVTNLKRTSYIVLDEADRMFDLGFEPQVMKVVNNVR 183
Query: 263 PDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
PDRQ VLFS TFP +++ L+RK + I +V AR + E++ ++
Sbjct: 184 PDRQTVLFSATFPKQMDALSRK--ILQKPIEITVGARSVVAPEIQQIV 229
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
+ V + IA SV ARGLD K+L+LV+N+D PN EDYVH ++ A FI+
Sbjct: 301 RAGVFPILIATSVAARGLDIKQLKLVVNYDCPNHLEDYVHRVGRTGRAGETGTAVTFITP 360
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E YA D+V+A ++S+ + +D++ +AD FI KV LG + G+G GG L+ R+
Sbjct: 361 EQDRYAADIVRALKISKAHIPEDVQKLADEFIKKVKLGQEKASGSGFGGKGLD----RLD 416
Query: 401 RGKQ-LRKAQAKEYG 414
+ + +RK Q + YG
Sbjct: 417 KDRDFVRKLQRRAYG 431
>gi|440294337|gb|ELP87354.1| DEAD box ATP-dependent RNA helicase, putative [Entamoeba invadens
IP1]
Length = 714
Score = 178 bits (451), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 106/285 (37%), Positives = 158/285 (55%), Gaps = 51/285 (17%)
Query: 46 AEDSHSASDYELFMKRAKKKKRDKNREIIKSKIK-IDYQQLRKNFYTQAREITRMSPAYR 104
+ DS + Y+ + + KKK+ E+++ K I+Y L K Y + ++TR++
Sbjct: 55 SSDSEDLTQYKDELTQIKKKRL----ELLEVDHKTINYLPLVKGLYVEVPDVTRLTDNEV 110
Query: 105 KQL---DLK---IREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISG 158
K++ +L+ +R K PKPI++W Q GL +LE LN++ P +Q A ++SG
Sbjct: 111 KEIRRVELEGCIVRGKRCPKPIQSWSQCGLNPVMLEIIRILNYDKPTPVQRQAIPAVMSG 170
Query: 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------- 210
LD++ +TGSGKTLA++LP+L+H+ QP ++PG D P+ +V P EL Q
Sbjct: 171 LDAIVCAKTGSGKTLAYVLPLLKHVLSQPALLPG-DGPIAIVFVPIRELAEQINTEIAKF 229
Query: 211 ----------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVL 239
++R GRMID+L N +ITNL RV+++VL
Sbjct: 230 AKFLKLRTTAVFGGMGISSQIGALKRGSEIVVCTPGRMIDILVTNSGRITNLRRVSFVVL 289
Query: 240 DEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
DEADRMFD+GF PQI I+ IRPD+Q V+FS TFP VE AR+
Sbjct: 290 DEADRMFDLGFGPQIKHIIDGIRPDKQIVMFSATFPQSVEQSARE 334
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATD 348
+A SV ARG+D K LELVIN+D PN EDYVH ++ + A FI++E +Y+ D
Sbjct: 437 VATSVCARGIDVKGLELVINYDCPNHMEDYVHRVGRTGRAGQRGKAITFITKEEDMYSDD 496
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKA 408
+VKA LS + +L + + + K + G+GG K+ ++++
Sbjct: 497 IVKALTLSGGRISKELSELNEGWKTKKLFLETKKRKMGYGGSGFKFDKK-----EEIKNL 551
Query: 409 QAKEYGFGEDKSDSEDVDE 427
+ K + E+++ E + E
Sbjct: 552 ETKVGAYLEEEAGGETLKE 570
>gi|156083314|ref|XP_001609141.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis T2Bo]
gi|154796391|gb|EDO05573.1| DEAD/DEAH box helicase and helicase conserved C-terminal domain
containing protein [Babesia bovis]
Length = 994
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 139/249 (55%), Gaps = 45/249 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRK-QLDLKIREKCAPKPIKTWRQTGLTTKILE 134
IDYQ +KNFY Q IT M A+RK ++++R K P+PI + Q GL IL
Sbjct: 342 IDYQPFKKNFYVQISAITAMKEHEVEAFRKANGNIRVRGKYCPRPIYNFSQCGLPDPILS 401
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+ N+E P IQ ++ G D +AI ETGSGKT+A+LLP +RH+ QP + ++
Sbjct: 402 LLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETGSGKTMAYLLPAIRHVLYQPKLRE-NE 460
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
+ L++APT EL Q ++R G
Sbjct: 461 GMIVLIIAPTRELASQIGVESSKLCKLVGIRTKAVYGGSPIGEQLNALKRGVEIVCGTPG 520
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+I++L + K+TNL RVT++V+DEADRMFD+GF PQI+ IV NIRPDRQ LFS TFP
Sbjct: 521 RLIEVLTISNGKVTNLRRVTFVVIDEADRMFDLGFSPQISAIVDNIRPDRQTALFSATFP 580
Query: 276 PRVEILARK 284
P +E LA+K
Sbjct: 581 PTIEALAKK 589
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
IA S+ ARG+D K + LVIN+ P+ EDYVH ++ ++ FI+ E + D
Sbjct: 690 IATSIAARGIDVKNVVLVINYATPDHIEDYVHRVGRTGRAGNIGTSYTFITPEEGAKSHD 749
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVN 376
++KA + S VV +L+ +A+ +A ++
Sbjct: 750 IIKAMKASNQVVPIELQELAEMHLATLD 777
>gi|183231239|ref|XP_650493.2| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|169802550|gb|EAL45107.2| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 722
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 171/342 (50%), Gaps = 78/342 (22%)
Query: 16 IDPLDAFMNDMECSFAEHPNNCF-RL--------------------------GRRLPAED 48
+D D FMN ME A+ N RL G++ A D
Sbjct: 5 VDDFDTFMNQMEEESAQQVNEAMGRLKELKGNEIKEIENEENEENEEHERNEGKKEEARD 64
Query: 49 SHSASDYELFMKRAKKKKRDKNREIIKSKIK-IDYQQLRKNFYTQAREITRMSPAYR--- 104
S +DY+ + + KKKK E++ K I Y+ + K Y + +I ++
Sbjct: 65 SEDLADYKDELAQIKKKKL----ELLDVDHKNIQYEPIHKALYVEVPDIKKLKKEEVKEI 120
Query: 105 KQLDLK---IREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDS 161
++++L+ ++ K PKPI+TW + G+ ++ L +E P +Q A +I+SG D+
Sbjct: 121 RRIELEGCIVKGKNCPKPIRTWSECGINPITMDVIKALKYEKPSPVQRQAIPVIMSGYDA 180
Query: 162 VAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------- 210
+ +TGSGKTLA+ +P+++H+ Q P+ G + P+G+V AP EL Q
Sbjct: 181 IVCAKTGSGKTLAYTIPLIKHVMAQRPLSKG-EGPIGIVFAPIRELAEQINTEINKFGKY 239
Query: 211 -------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEA 242
++R GRMID+L N +ITNL RVT++VLDEA
Sbjct: 240 LNIRSVAVFGGTGISNQIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVVLDEA 299
Query: 243 DRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
DRMFDMGF PQI RI++ IRPD+Q V+FS TFP VE AR+
Sbjct: 300 DRMFDMGFGPQIKRIIEGIRPDKQIVMFSATFPISVEQHARE 341
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
I S+ ARGLD K LELVIN+D PN EDYVH ++ + A FI++E Y+ D
Sbjct: 444 ITTSLCARGLDVKGLELVINYDCPNHLEDYVHRVGRTGRAGKRGKAITFITKEEERYSED 503
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHG-TGHGG 389
+VKA LS + +L + + + K L L G G+GG
Sbjct: 504 IVKALTLSGGSISKELNDMYEEWKTK-KLFLETKEGKKGYGG 544
>gi|85001021|ref|XP_955229.1| RNA helicase [Theileria annulata strain Ankara]
gi|65303375|emb|CAI75753.1| RNA helicase, putative [Theileria annulata]
Length = 976
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/276 (39%), Positives = 147/276 (53%), Gaps = 45/276 (16%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRK-QLDLKIREKCAPKPIKTWRQTGLTTKIL 133
KI+Y RKNFY Q IT M A+R+ ++++ K P+PI ++ Q GL IL
Sbjct: 321 KIEYLPFRKNFYVQVSSITNMGEHEVDAFRRANGNIRVYGKKCPRPISSFSQCGLPDPIL 380
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ K +E P IQ ++ G D + I ETGSGKTLAFLLP +RH +QP + +
Sbjct: 381 KILEKREYERPFPIQMQCIPALMCGRDVIGIAETGSGKTLAFLLPAIRHALDQPSLRE-N 439
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRRG-------- 215
D + LV+APT ELV Q ++RG
Sbjct: 440 DGMIVLVIAPTRELVIQISNESSKFSRAVGLKTLAIYGGAGIGEQLNALKRGAEIVIGTP 499
Query: 216 -RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
R+ID+L + K+TNL RVT+LVLDEADRMFDMGF PQI+ IV NIRPDRQ LFS TF
Sbjct: 500 GRLIDVLTLSKGKVTNLRRVTFLVLDEADRMFDMGFAPQISAIVGNIRPDRQTALFSATF 559
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
P +E LA+K L I R + + + +++
Sbjct: 560 PIMIENLAKKILAKPLQIVVGQRGKSASQVDQHVLV 595
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
IA S+ ARG+D K + LVIN+ AP+ +EDYVH ++ ++ F++ E A + D
Sbjct: 670 IATSIAARGIDVKSVVLVINYAAPDHFEDYVHRVGRTGRAGTIGTSYTFLTPEEASKSHD 729
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVN 376
++KA +L+ V +L ++ + +A ++
Sbjct: 730 IIKALKLASQEVPKELLQLSQAHLATLD 757
>gi|260800277|ref|XP_002595060.1| hypothetical protein BRAFLDRAFT_125765 [Branchiostoma floridae]
gi|229280302|gb|EEN51071.1| hypothetical protein BRAFLDRAFT_125765 [Branchiostoma floridae]
Length = 875
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 163/342 (47%), Gaps = 77/342 (22%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNC------FRLGRRLPAEDSHSASDYELFMKRA--KKKK 66
E DPLD+FM +E + A N R E+ Y +M+
Sbjct: 96 EEDPLDSFMAQVETAAARDLENMGKKDEKKTKEERFDIEEMDDQESYFKYMEENPLAGVN 155
Query: 67 RDKNREII------------KSKI----------KIDYQQLRKNFYTQAREITRMSPA-- 102
D + I+ KSKI +IDYQ KNFY + +I+ +SPA
Sbjct: 156 PDDDDPIVEYDEDGNPIVPEKSKIIDPLPPIDHSEIDYQTFEKNFYEEHTDISSLSPAEV 215
Query: 103 --YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLD 160
R++LD++I PK + ++ G ++L K + P IQA + +SG D
Sbjct: 216 NELRRKLDIRISGAAPPKLVTSFAHFGFDEQLLHQIRKSEYSQPTPIQAQGIPVALSGRD 275
Query: 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---QVRR--- 214
+ I +TGSGKT AF+ PML HI +Q + PG D P+GL+ APT EL +Q + +R
Sbjct: 276 IIGIAKTGSGKTAAFVWPMLVHIMDQKELEPG-DGPIGLICAPTRELSQQIYAEAKRFGK 334
Query: 215 ---------------------------------GRMIDLLCKNGVKITNLTRVTYLVLDE 241
GR+IDL+ K K TNL RVTYLV DE
Sbjct: 335 CYGLSVVAAYGGGSMWEQTKALQLGAEIVVCTPGRLIDLVKK---KATNLQRVTYLVFDE 391
Query: 242 ADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
ADRMFDMGFEPQ+ I ++RPDRQ +LFS TF R+E L R
Sbjct: 392 ADRMFDMGFEPQVRSIANHVRPDRQTLLFSATFKKRIERLCR 433
>gi|25083096|gb|AAN72041.1| putative RNA helicase [Arabidopsis thaliana]
Length = 559
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 142/210 (67%), Gaps = 5/210 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K +VCNL IA SV ARGLD KELELV+NFDAPN YEDYVH ++ K CA FISE
Sbjct: 216 KNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 275
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVK ELSE V DDLKA+AD F+ KV G+ Q HGTG+GG +
Sbjct: 276 DDAKYAPDLVKDLELSEQPVPDDLKALADGFMVKVKQGIEQAHGTGYGGSGFKFNEEEEE 335
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKS-GGDISHQD-SIAKIATIAAASNSKASA 458
K +KAQAKEYGF EDKSDSED ++ RK+ GG+IS Q + A+IA IAAA+ + A+A
Sbjct: 336 VRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQQQATFAQIAAIAAAAKAAAAA 395
Query: 459 STPSLISVAQLLPNGGPSIPLPGVLGLSVP 488
+ ++ QLL NGG +PGVL ++VP
Sbjct: 396 PVSAPVTANQLLANGGGLAAMPGVLPVTVP 425
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMID+LC + KITNL RVT+LV+DEADRMFDMGFEPQITRI+QNIRP+RQ VLFS TF
Sbjct: 54 GRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATF 113
Query: 275 PPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPND 317
P +VE LARK V N + V R + K++ ++ +D
Sbjct: 114 PRQVETLARK--VLNKPVEIQVGGRSVVNKDITQLVEVRPESD 154
>gi|308453523|ref|XP_003089473.1| hypothetical protein CRE_13197 [Caenorhabditis remanei]
gi|308240199|gb|EFO84151.1| hypothetical protein CRE_13197 [Caenorhabditis remanei]
Length = 514
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 124/224 (55%), Gaps = 45/224 (20%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
K+ Y++ +KNFY + EI RMS A YR +LD + ++ PKPIKTW Q G+ K++
Sbjct: 268 KVYYRKFKKNFYIETEEIKRMSKAEVKAYRDELDSITVKGIDVPKPIKTWAQCGVNLKMM 327
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K + P +IQA A I+SG D + I +TGSGKTLAFLLPM RHI +QP + G
Sbjct: 328 NVLKKYEYTKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELEEG- 386
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
D P+ +++APT EL Q +
Sbjct: 387 DGPIAVILAPTRELAMQTYKEANKFAKVLGLRVACTYGGVGISEQIADLKRGAEIVVCTP 446
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
GRMID+L N K+TNL RVTYLVLDEADRMFD GFEPQ+ ++
Sbjct: 447 GRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQVRSLL 490
>gi|449703830|gb|EMD44199.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica KU27]
Length = 722
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 114/342 (33%), Positives = 171/342 (50%), Gaps = 78/342 (22%)
Query: 16 IDPLDAFMNDMECSFAEHPNNCF-RL--------------------------GRRLPAED 48
+D D FMN ME A+ + RL G++ A D
Sbjct: 5 VDDFDTFMNQMEEESAQQVSEAMGRLKELKGNEIKEIENEENEENEEHERNEGKKEEARD 64
Query: 49 SHSASDYELFMKRAKKKKRDKNREIIKSKIK-IDYQQLRKNFYTQAREITRMSPAYR--- 104
S +DY+ + + KKKK E++ K I Y+ + K Y + +I ++
Sbjct: 65 SEDLADYKDELAQIKKKKL----ELLDVDHKNIQYEPIHKALYVEVPDIKKLKKEEVKEI 120
Query: 105 KQLDLK---IREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDS 161
++++L+ ++ K PKPI+TW + G+ ++ L +E P +Q A +I+SG D+
Sbjct: 121 RRIELEGCIVKGKNCPKPIRTWSECGINPITMDVIKALKYEKPSPVQRQAIPVIMSGYDA 180
Query: 162 VAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------- 210
+ +TGSGKTLA+ +P+++H+ Q P+ G + P+G+V AP EL Q
Sbjct: 181 IVCAKTGSGKTLAYTIPLIKHVMAQRPLSKG-EGPIGIVFAPIRELAEQINTEINKFGKY 239
Query: 211 -------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEA 242
++R GRMID+L N +ITNL RVT++VLDEA
Sbjct: 240 LNIRSVAVFGGTGISNQIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVVLDEA 299
Query: 243 DRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
DRMFDMGF PQI RI++ IRPD+Q V+FS TFP VE AR+
Sbjct: 300 DRMFDMGFGPQIKRIIEGIRPDKQIVMFSATFPISVEQHARE 341
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
I S+ ARGLD K LELVIN+D PN EDYVH ++ + A FI++E Y+ D
Sbjct: 444 ITTSLCARGLDVKGLELVINYDCPNHLEDYVHRVGRTGRAGKRGKAITFITKEEERYSED 503
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHG-TGHGG 389
+VKA LS + +L + + + K L L G G+GG
Sbjct: 504 IVKALTLSGGSISKELNDMYEEWKTK-KLFLETKEGKKGYGG 544
>gi|290972392|ref|XP_002668937.1| predicted protein [Naegleria gruberi]
gi|284082475|gb|EFC36193.1| predicted protein [Naegleria gruberi]
Length = 898
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 171/353 (48%), Gaps = 74/353 (20%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQL-DLKIREKCAPKPIKTWRQTGLTTKIL 133
K++Y RKNF+ RE MS RK++ ++K+ P P+KTW Q GL IL
Sbjct: 332 KMEYLPFRKNFFIVPREYANMSENDIAELRKEMGNIKVHGHDIPPPVKTWTQCGLNDTIL 391
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ P AIQ+ A I+SG + + I +TGSGKTLAF+LPMLRH+ +QPP+
Sbjct: 392 GVLETHGYTKPFAIQSQALPCIMSGRNIIGIAKTGSGKTLAFVLPMLRHVLDQPPLKTV- 450
Query: 194 DSPVGLVMAPTGELVRQ---QVRR------------------------------------ 214
D P+G+VMAPT EL Q + +
Sbjct: 451 DGPIGIVMAPTRELAMQIHSDIEKFSAPLMLKTACVYGGAGIAEQIALLKNGAHIIVCTP 510
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI---VQNIRPDRQAVLFS 271
GR+IDLLC N ++TNLTR + G+ + + ++ I D F
Sbjct: 511 GRLIDLLCANRGRVTNLTR----------DLVSAGYRENVCTLDGSMEQIERDCTISDF- 559
Query: 272 PTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL- 330
K+ N+ + SV +RGLD + LV+N++ P+ YEDY+H ++
Sbjct: 560 ------------KSQKFNIMVGTSVCSRGLDVPSIRLVVNYNCPDHYEDYIHKVGRTGRA 607
Query: 331 --KSCAFRFISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQ 381
K A+ FIS + YA DLVKA + S V +DL+ + D+++ K NLGL Q
Sbjct: 608 GKKGVAYTFISTDEEKYAPDLVKALKQSNNPVPEDLQKLCDNYLTKRNLGLVQ 660
>gi|399216070|emb|CCF72758.1| unnamed protein product [Babesia microti strain RI]
Length = 1177
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 156/305 (51%), Gaps = 45/305 (14%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRM-----SPAYR 104
H S + + + A K + K E + I +K+FY + +EI + S +
Sbjct: 437 HKQSKVQFYTEIAGKVRAQKKLEPMDPAIAAALPAFQKDFYVECKEIASLADHEISSIRK 496
Query: 105 KQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAI 164
++K+R K P+PI + Q GL ++L+ K ++ENP +Q +I+SG D V +
Sbjct: 497 TNGNIKVRGKGCPRPIINFAQCGLPDEVLKILEKRDYENPFPVQMQCIPVIMSGRDLVGV 556
Query: 165 TETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR---------- 214
+TGSGKTLA+LLP++RH+ QP ++ GD + LV+ PT EL Q R
Sbjct: 557 AQTGSGKTLAYLLPLVRHVMAQPKLLIGDGC-IALVIVPTRELAVQVNREAMKFAKPVKL 615
Query: 215 -----------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRM 245
GR+ID+L + K+TNL R T++VLDEADRM
Sbjct: 616 VSTAVYGGAGIGDQLNALKRGSHIVVGTPGRLIDVLTISNGKVTNLKRTTFVVLDEADRM 675
Query: 246 FDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKE 305
FD+GF PQ+ I+ N RPDRQ LFS TFP +E+LA++ + + + G ++ E
Sbjct: 676 FDLGFAPQVQAIIDNTRPDRQTCLFSATFPSAIEMLAKRILTNPVEVTVGKKGAGANKVE 735
Query: 306 LELVI 310
+++
Sbjct: 736 QHVLV 740
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
I+ SV +RGLD K++ LVIN++ P EDY+H ++ A+ + +A D
Sbjct: 818 ISTSVASRGLDVKQVVLVINYNTPGHLEDYIHRVGRTGRAGNVGVAYTLVLPSDAPKTPD 877
Query: 349 LVKAFELSELVVRDDLKAVADSFI 372
+VKA E S V L+++ D+ +
Sbjct: 878 IVKALEYSNQPVPHQLQSLCDAHL 901
>gi|344301469|gb|EGW31781.1| hypothetical protein SPAPADRAFT_155409 [Spathaspora passalidarum
NRRL Y-27907]
Length = 839
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 140/248 (56%), Gaps = 47/248 (18%)
Query: 82 YQQLRKNFYTQAREITRMS----PAYRKQL-DLKIREKCAPK--PIKTWRQTGLTTKILE 134
Y RK+FY Q E+ ++ RK+L +++++ A PI W GL + +
Sbjct: 212 YAPFRKSFYQQPYELQMLTQEQISEIRKELGNVRVKGNNASHYAPISKWSHLGLPSNLST 271
Query: 135 TFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ KL E+P AIQ A +I+SG D + + +TGSGKTL++++PMLRHI +QPP+ +
Sbjct: 272 VITDKLQFESPSAIQCQALPIIMSGRDVIGVAKTGSGKTLSYVIPMLRHIQDQPPIRE-N 330
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------G 215
D P+G+V+ PT EL Q R+ G
Sbjct: 331 DGPIGVVLCPTRELALQIQRKISNFTSKSLRVCCCYGGSSIEPQINELKSGVEIIVGTPG 390
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+IDLL N ++TNL R TY+VLDEADRMFD+GFEPQI++I IRPDRQ +LFS TFP
Sbjct: 391 RVIDLLAANSGRVTNLQRTTYIVLDEADRMFDLGFEPQISKIFTQIRPDRQTILFSATFP 450
Query: 276 PRVEILAR 283
++E LA+
Sbjct: 451 RKMEQLAK 458
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 12/144 (8%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAI 344
++ IA SV ARGLD K L LVINFD PN EDYVH ++ K A F+ +
Sbjct: 565 VDILIATSVAARGLDVKSLGLVINFDPPNHMEDYVHRVGRTGRAGSKGTAITFVWNKQEH 624
Query: 345 YATDLVKAFELSELVVRDD-LKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGK 403
+LV+A +S++ D L +A+SF +KV G ++H G GG L+ + K
Sbjct: 625 EIANLVRALRMSKVEEIDSRLVEIAESFSSKVKQGKEKIH-YGFGGKGLDKL-------K 676
Query: 404 QLRKAQAKEYGFGEDKSDSEDVDE 427
Q+R ++ + D+S +E V E
Sbjct: 677 QVRDSKLQMEKNMYDESTTETVKE 700
>gi|241953695|ref|XP_002419569.1| pre-mRNA-processing ATP-dependent RNA helicase, putative [Candida
dubliniensis CD36]
gi|223642909|emb|CAX43164.1| pre-mRNA-processing ATP-dependent RNA helicase, putative [Candida
dubliniensis CD36]
Length = 873
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 138/250 (55%), Gaps = 47/250 (18%)
Query: 81 DYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+YQ+ RK FY + E++ +S R+ LD +K++ P+PI W L T +
Sbjct: 236 NYQEFRKVFYNETYELSSLSNEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSV 295
Query: 136 F-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P AIQ+ A I+SG D + I +TGSGKTL+++LPMLRHI +Q + +
Sbjct: 296 IHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIHDQ-QFLKDNQ 354
Query: 195 SPVGLVMAPTGELVRQ----------------------------QVRR------------ 214
P+GL+++PT EL Q Q+
Sbjct: 355 GPIGLILSPTRELALQIEKEILNFTKKNNYLRVCCCYGGSSIENQINELKKGVEIIVGTP 414
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+IDLL N ++TNL R T++VLDEADRMFD+GFEPQ+ +I IRPDRQ VLFS TF
Sbjct: 415 GRVIDLLAANSGRVTNLKRCTFVVLDEADRMFDLGFEPQVNKIFTQIRPDRQTVLFSATF 474
Query: 275 PPRVEILARK 284
P ++E LA++
Sbjct: 475 PRKMETLAKQ 484
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAI 344
N+ IA S+ ARGLD + L LVINFD PN EDYVH ++ K A F+S
Sbjct: 595 INILIATSIAARGLDVRNLGLVINFDPPNHMEDYVHRVGRTGRAGAKGNAVTFVSSSQPK 654
Query: 345 YATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN 393
+LVKA +LS + L+ +A+ FI KV G ++ G+G GG L+
Sbjct: 655 EVFNLVKALKLSHSDIDPKLEEIANKFINKVKAGKEKI-GSGFGGKGLD 702
>gi|448520725|ref|XP_003868348.1| Prp5 pre-mRNA processing RNA-helicase [Candida orthopsilosis Co
90-125]
gi|380352688|emb|CCG25444.1| Prp5 pre-mRNA processing RNA-helicase [Candida orthopsilosis]
Length = 857
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/318 (35%), Positives = 164/318 (51%), Gaps = 53/318 (16%)
Query: 17 DPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSAS---DYELFM--KRAKKKKRDKNR 71
D LDAFM ++ + + N + + D SA D + + K AK + +
Sbjct: 162 DELDAFMKSIDTNETKVEANGALFEIQTNSTDDESADEDIDIQALIDSKLAKLNTTKELK 221
Query: 72 EIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLD-----LKIREKCAPKPIKTWRQT 126
+I S++ Y RKNFY E++ MS L +++R K P P W Q
Sbjct: 222 DIDHSQVS--YPPFRKNFYKVPFELSLMSEDELGLLRLDLDDIRVRGKNVPSPFTKWSQL 279
Query: 127 GLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWE 185
L I+ + +L + P +QA A +I+SG D + + +TGSGKTL+++LPM+RHI E
Sbjct: 280 LLPENIISVVNDQLQFDKPSPVQAQAIPIILSGRDLIGVAKTGSGKTLSYVLPMMRHIQE 339
Query: 186 QPPVVPGDDSPVGLVMAPTGELVRQ------------------------------QVRR- 214
Q G D PV ++++PT EL Q +RR
Sbjct: 340 QAASASG-DGPVAVILSPTRELALQIEQEVLNFTRKVDKRVTCCYGGSKIENQISDLRRG 398
Query: 215 --------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQ 266
GRMIDLL NG ++T++ R T++VLDEADRMFD+GFEPQI +I+ +RPDRQ
Sbjct: 399 VDVVVATPGRMIDLLAANGGRVTSMRRTTFVVLDEADRMFDLGFEPQIRKILSQVRPDRQ 458
Query: 267 AVLFSPTFPPRVEILARK 284
VLFS TFP ++EIL ++
Sbjct: 459 TVLFSATFPRKLEILVKQ 476
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 68/139 (48%), Gaps = 9/139 (6%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAI 344
N+ IA S+ ARGLD K L LV+NFD P+ EDYVH ++ A F+S
Sbjct: 584 VNILIATSIAARGLDVKNLGLVVNFDPPSHLEDYVHRVGRTGRAGADGIAITFVSRNQEK 643
Query: 345 YATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQ 404
LVKA +LS V +L+ +ADSF KV G +V G NL + R + K
Sbjct: 644 EINVLVKALKLSSNEVTPELQIIADSFNQKVKAGGAKVGFGFGGKGLDNLQEVRENKLKM 703
Query: 405 LRKAQAKEYGFGEDKSDSE 423
+K +GE+ D E
Sbjct: 704 EKKM------YGEEAEDKE 716
>gi|307109616|gb|EFN57854.1| hypothetical protein CHLNCDRAFT_6836, partial [Chlorella
variabilis]
Length = 461
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 137/246 (55%), Gaps = 47/246 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I Y + K+FY +A +I ++ A YR+QL +++ AP+PI+T++Q G ++
Sbjct: 18 IAYSEFNKDFYEEAPDIAALTHAQVAEYRRQLGMRVSGFDAPRPIQTFKQCGFDGPLMAA 77
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K ++ P AIQA A + G D + I +TGSGKT AF+LPM+ HI +QP + G +
Sbjct: 78 ITKAGYQKPTAIQAQALPAALCGRDVLGIAKTGSGKTAAFVLPMIVHIMDQPELQKG-EG 136
Query: 196 PVGLVMAPTGELVRQ---QVRR------------------------------------GR 216
P+G+++APT EL Q + RR GR
Sbjct: 137 PIGVIVAPTRELAEQIHKETRRFSKAYNLGVAAAFGGLSKHQQFKDLKAGCEVAVCTPGR 196
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MIDL+ +K N+ R TYLV DEADRMFDMGFEPQ+ I+ IRPDRQ +LFS T P
Sbjct: 197 MIDLIR---MKACNMKRATYLVFDEADRMFDMGFEPQVRSIMGQIRPDRQTLLFSATMPR 253
Query: 277 RVEILA 282
+VE LA
Sbjct: 254 KVERLA 259
>gi|354545573|emb|CCE42301.1| hypothetical protein CPAR2_808500 [Candida parapsilosis]
Length = 863
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/326 (35%), Positives = 168/326 (51%), Gaps = 63/326 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELF-----------MKRAK 63
E D LDAFM ++ + +N + +P E ++S D + +K AK
Sbjct: 160 EEDELDAFMKLIDTN-----DNQVEVNGAVPEEFTNSTDDESIEEEDTDLQSLIDLKLAK 214
Query: 64 KKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPK 118
K + I +I Y +K+FY E++ MS R LD ++++
Sbjct: 215 LNNTTKELKDIDHS-QISYLSFKKDFYKVPFELSSMSEDEISLLRMDLDDIRVKGNNVTP 273
Query: 119 PIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
P W Q L I+ + KL + P IQA A +I+SG D + + +TGSGKTL++++
Sbjct: 274 PFTKWSQLLLPENIISVVNDKLRFDKPSPIQAQAIPVILSGRDFIGVAKTGSGKTLSYVI 333
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQV---------------------- 212
PM+RHI EQ P GD PV ++++PT EL + Q+V
Sbjct: 334 PMMRHIQEQAPSASGD-GPVAVILSPTRELALQIEQEVLKFAKALDKRVTCCYGGSKIEN 392
Query: 213 -----RRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
RRG RMIDLL NG ++T + R T++VLDEADRMFD+GFEPQ+ +I+
Sbjct: 393 QISDLRRGVDVVVATPGRMIDLLAANGGRVTTMRRTTFVVLDEADRMFDLGFEPQMKKIL 452
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARK 284
+RPDRQ +LFS TFP ++EILAR+
Sbjct: 453 SQVRPDRQTILFSATFPRKLEILARQ 478
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAI 344
N+ IA S+ ARGLD K L LV+NFD PN EDYVH ++ A F+S
Sbjct: 586 VNILIATSIAARGLDVKNLGLVVNFDPPNHLEDYVHRVGRTGRAGASGVAITFVSRNQER 645
Query: 345 YATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRR---IRR 401
LVKA LS V +L+ +ADSF KV G ++ G NL + R +R
Sbjct: 646 EINVLVKALRLSSNEVIPELQTIADSFNQKVRSGGAKLGFGFGGKGLDNLQEVRDNKLRM 705
Query: 402 GKQLRKAQAKEYGFGEDKSDSE 423
KQ+ +GE+ D E
Sbjct: 706 EKQM---------YGEEAEDKE 718
>gi|255719708|ref|XP_002556134.1| KLTH0H05852p [Lachancea thermotolerans]
gi|238942100|emb|CAR30272.1| KLTH0H05852p [Lachancea thermotolerans CBS 6340]
Length = 811
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 150/267 (56%), Gaps = 48/267 (17%)
Query: 87 KNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPIKTWRQTGLTTKILETFSK-LN 140
K+FY + EI MS +L ++KI+ + P+PI W Q GLTT I++ +K
Sbjct: 193 KDFYIEPEEIKNMSETEIDELRLGLDNVKIKGQGCPRPIVKWSQLGLTTDIMDLITKEFA 252
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+P IQA A I++G D + I++TGSGKT++FLLP+LR I P+ G+ P+GL+
Sbjct: 253 FVSPTPIQAQAIPAIMAGRDVIGISKTGSGKTVSFLLPLLRQIKALRPLTSGETGPMGLI 312
Query: 201 MAPTGEL----------------------------VRQQVRR------------GRMIDL 220
+APT EL ++QQ++ GR IDL
Sbjct: 313 LAPTRELAVQIHEETEKFLNPVSKLRSICCTGGSELKQQIKELKKGVEIVVATPGRFIDL 372
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N K+ N RVT++V+DEADR+FD+GFEPQIT I++ IRPD+Q VLFS TFP +++
Sbjct: 373 LTLNSGKLLNTERVTFVVMDEADRLFDLGFEPQITEIMKTIRPDKQCVLFSATFPTKLKS 432
Query: 281 LARKTNVCNLSIANSVRARGLDEKELE 307
A + + + I+ ++ ++ L + +E
Sbjct: 433 FASR--ILDRPISITINSKSLINENIE 457
>gi|238881065|gb|EEQ44703.1| hypothetical protein CAWG_02982 [Candida albicans WO-1]
Length = 514
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 139/250 (55%), Gaps = 47/250 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSPAY----RKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+YQ+ RK FY +A E++ +S R+ LD +K++ P+PI W L T +
Sbjct: 248 NYQEFRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSV 307
Query: 136 F-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P AIQ+ A I+SG D + I +TGSGKTL+++LPMLRHI +Q +
Sbjct: 308 IHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQ-QFSKDNQ 366
Query: 195 SPVGLVMAPTGELVRQ----------------------------QVRR------------ 214
P+GL+++PT EL Q Q+
Sbjct: 367 GPIGLILSPTRELALQIEKEILNFTKRNNSLRVCCCYGGSSIENQINELKKGVEIIVGTP 426
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+IDLL N ++ NL R T++VLDEADRMFD+GFEPQ+ +I+ +IRPDRQ VLFS TF
Sbjct: 427 GRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTHIRPDRQTVLFSATF 486
Query: 275 PPRVEILARK 284
P ++E LA++
Sbjct: 487 PRKMETLAKQ 496
>gi|395736192|ref|XP_003780666.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46 [Pongo abelii]
Length = 1014
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 122/213 (57%), Gaps = 38/213 (17%)
Query: 109 LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETG 168
+ ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D + I +TG
Sbjct: 340 ITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTG 399
Query: 169 SGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR-------------- 214
SGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q +
Sbjct: 400 SGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTLGLRVVC 458
Query: 215 -------------GRMIDLLCKN----------GVKITNLTRVTYLVLDEADRMFDMGFE 251
R I+L ++ ++TNL RVTY+VLDEADRMFDMGFE
Sbjct: 459 VYGGTGISEQKGPSRFIELGFRDLNHQRFFRPYDGRVTNLRRVTYVVLDEADRMFDMGFE 518
Query: 252 PQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
PQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 519 PQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 551
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL--------KSCAF 335
K C L +A SV ARGLD K L LV+N+ P YEDYVH W K A+
Sbjct: 644 KNGTCKLLVATSVAARGLDVKHLILVVNYSWPQHYEDYVHRAGADWKSRKTRLKNKGYAY 703
Query: 336 RFISEENAIYATDLVKAFELSELVVRDDLKAVADSF 371
FI+E+ A YA D++KA ELS V DL+ + F
Sbjct: 704 TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDF 739
>gi|297828467|ref|XP_002882116.1| hypothetical protein ARALYDRAFT_483908 [Arabidopsis lyrata subsp.
lyrata]
gi|297327955|gb|EFH58375.1| hypothetical protein ARALYDRAFT_483908 [Arabidopsis lyrata subsp.
lyrata]
Length = 739
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 154/283 (54%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
IDY+ + K+FY + I+ MS YR++L +++ +P+KT+ G +++I+
Sbjct: 184 IDYEPINKDFYEEVESISGMSEQETSDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSA 243
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E P AIQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + D+
Sbjct: 244 IKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQK-DEG 302
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 303 PIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGR 362
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID+L +K + R +YLVLDEADRMFD+GFEPQ+ IV IRPDRQ +LFS T P
Sbjct: 363 LIDMLK---IKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPW 419
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + + I +V G+ +++ V+N P+D E
Sbjct: 420 KVEKLARE--ILSDPIRVTVGEVGMANEDITQVVNV-IPSDAE 459
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS 328
R+E L + K+ + ++ IA V ARGLD K L+ V+N+D D + +VH ++
Sbjct: 513 RMETLQKFKSGIYHVLIATDVAARGLDIKSLKTVVNYDIARDMDMHVHRIGRT 565
>gi|68472255|ref|XP_719923.1| hypothetical protein CaO19.6831 [Candida albicans SC5314]
gi|68472490|ref|XP_719806.1| hypothetical protein CaO19.14123 [Candida albicans SC5314]
gi|74656514|sp|Q5ADL0.1|PRP5_CANAL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|46441642|gb|EAL00938.1| hypothetical protein CaO19.14123 [Candida albicans SC5314]
gi|46441768|gb|EAL01063.1| hypothetical protein CaO19.6831 [Candida albicans SC5314]
Length = 884
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 138/250 (55%), Gaps = 47/250 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSPAY----RKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+YQ+ RK FY +A E++ +S R+ LD +K++ P+PI W L T +
Sbjct: 248 NYQEFRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSV 307
Query: 136 F-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P AIQ+ A I+SG D + I +TGSGKTL+++LPMLRHI +Q +
Sbjct: 308 IHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQ-QFSKDNQ 366
Query: 195 SPVGLVMAPTGELVRQ----------------------------QVRR------------ 214
P+GL+++PT EL Q Q+
Sbjct: 367 GPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTP 426
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+IDLL N ++ NL R T++VLDEADRMFD+GFEPQ+ +I+ IRPDRQ VLFS TF
Sbjct: 427 GRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATF 486
Query: 275 PPRVEILARK 284
P ++E LA++
Sbjct: 487 PRKMETLAKQ 496
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIY 345
N+ IA S+ ARGLD + L LVINFD PN EDYVH ++ K A F+S
Sbjct: 608 NILIATSIAARGLDVRNLGLVINFDPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKE 667
Query: 346 ATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGK-Q 404
+LVKA +LS + L+ +A+ F+ KV G ++ +G GG L+ ++ +R K +
Sbjct: 668 VFNLVKALKLSHSDIDPKLEEIANKFVTKVKAGKEKI-SSGFGGKGLDNLQ-EVRDNKLK 725
Query: 405 LRKAQAKEYGFGEDKSDSEDVDEGTRKSGGD 435
L K + FG+ + + + T+KS +
Sbjct: 726 LEKQR-----FGDQQPQRQQEETETKKSNDE 751
>gi|365987862|ref|XP_003670762.1| hypothetical protein NDAI_0F02010 [Naumovozyma dairenensis CBS 421]
gi|343769533|emb|CCD25519.1| hypothetical protein NDAI_0F02010 [Naumovozyma dairenensis CBS 421]
Length = 888
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/343 (32%), Positives = 183/343 (53%), Gaps = 68/343 (19%)
Query: 6 TKQLPVVQ------IEIDPLDAFMNDMECSFAEH---PNNCFRL------GRRLPAEDSH 50
TK++P ++ + IDPL+ FM+ + + NN + +L E +
Sbjct: 148 TKEIPSIETRKNEDVAIDPLEQFMDSLNANVEPRVIMNNNAGDVMDEDDDQTKLSDEQAT 207
Query: 51 SASDYEL--FMKRAKKKKRDKNREIIKSKIKIDYQQL---RKNFYTQAREITRMSPAYRK 105
A D L + AK KR K ++ + S+I+ + +L +K FY + EI +MS A +
Sbjct: 208 LADDKNLEENARYAKITKR-KTKKFV-SEIQYNAAELEPFQKQFYVEPEEIKQMSSAEVE 265
Query: 106 QL-----DLKIREKCAPKPIKTWRQTGLTTKILETFSK-LNHENPVAIQAPASALIISGL 159
+L ++K++ PKPI W Q GL T +++ +K + IQ+ A I+ G
Sbjct: 266 ELRLNLDNIKVKGHDCPKPITKWSQLGLNTDVMDLITKDFGFRSLTPIQSQAIPAIMDGH 325
Query: 160 DSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL------------ 207
D + I++TGSGKT+++LLP++RHI Q P++ + P+GL++APT EL
Sbjct: 326 DVIGISKTGSGKTISYLLPLIRHIKAQNPLMKNETGPLGLILAPTRELALQIHQEIIKFI 385
Query: 208 ----------------VRQQVRR------------GRMIDLLCKNGVKITNLTRVTYLVL 239
++QQ+ GR+IDLL N ++ ++ RVT++++
Sbjct: 386 STDTAITSICCTGGSELKQQINSLKKGVHIVVATPGRLIDLLTLNNGRLMSIKRVTFVIM 445
Query: 240 DEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILA 282
DEADR+FD+GFEPQIT+I++ IRPD+Q VLFS TFP ++ A
Sbjct: 446 DEADRLFDLGFEPQITQIMKTIRPDKQCVLFSATFPNKLRNFA 488
>gi|241172335|ref|XP_002410726.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215494955|gb|EEC04596.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 658
Score = 171 bits (433), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/343 (34%), Positives = 165/343 (48%), Gaps = 81/343 (23%)
Query: 17 DPLDAFMNDMECSFAEH---------PNNCFRLGRRLPAEDSHSASDYELFMKR---AKK 64
DPLDA+M ++E + PN R G R E+ Y +++ A
Sbjct: 42 DPLDAYMANIESQGMQQFVTFVVLTRPNPILR-GVRDDIENEDDEESYYRYVEENPNAGA 100
Query: 65 KKRDKNREI-----------IKSKI----------KIDYQQLRKNFYTQAREITRMSP-- 101
K D + E+ +KSK I Y++ KNFY + EI +SP
Sbjct: 101 DKDDSDLELEYDEDGNPIAPVKSKYIDPLPPIDHSTISYKEFTKNFYQEHEEIAALSPEE 160
Query: 102 --AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGL 159
A R L +K+ PKP+ ++ G +L K + P IQA + +SG
Sbjct: 161 VDALRATLGVKVTGPLPPKPVTSFAHLGFDEPMLRAIRKAEYTQPSPIQAQGVPVAMSGR 220
Query: 160 DSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---QVRR-- 214
D + I +TGSGKT AF+ PML HI +Q +V G + P+GL++APT EL +Q + +R
Sbjct: 221 DMIGIAKTGSGKTAAFIWPMLTHIMDQRELVEG-EGPIGLILAPTRELAQQIYLEAKRFG 279
Query: 215 ----------------------------------GRMIDLLCKNGVKITNLTRVTYLVLD 240
GRMIDL+ +K TNL RVT+LVLD
Sbjct: 280 KVYGVGAICCFGGGSKWEQSKALQEGAEIVVATPGRMIDLI---KMKATNLERVTFLVLD 336
Query: 241 EADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
EADRMFDMGFEPQ+ I ++RPDRQ ++FS TF +VE LAR
Sbjct: 337 EADRMFDMGFEPQVRSICDHVRPDRQTLMFSATFKRKVERLAR 379
>gi|356572801|ref|XP_003554554.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 768
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 152/283 (53%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
IDY+ K+FY + I+ MS YRK L +++ PKPIKT+ G ++I+
Sbjct: 181 IDYEPFNKDFYEETPSISGMSEQDVSEYRKSLAIRVSGFDVPKPIKTFEDCGFPSQIMNA 240
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E P +IQ A +++SG D + I +TGSGKT +F+LPM+ HI +QP + ++
Sbjct: 241 IKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQK-EEG 299
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 300 PIGVICAPTRELAHQIYLEAKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGR 359
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID+L +K + R TYLVLDEADRMFD+GFEPQ+ IV IRPDRQ +LFS T P
Sbjct: 360 LIDMLK---MKALTMMRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPR 416
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + + I +V G+ +++ V++ P+D E
Sbjct: 417 KVEKLARE--ILSDPIRVTVGEVGMANEDITQVVHV-IPSDSE 456
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R++IL + K+ + ++ IA V ARGLD K ++ V+NFD D + +VH ++
Sbjct: 510 RMDILQKFKSGLYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKD 569
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+ + A +A +LV + EL +L ++D
Sbjct: 570 GVAYTLITLKEARFAGELVNSLVAAGQNVSVELMDLAMKD 609
>gi|168053931|ref|XP_001779387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669185|gb|EDQ55777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 166/354 (46%), Gaps = 88/354 (24%)
Query: 15 EIDPLDAFMNDMECSFAE-----------------HPNNCFRLGRR-----LPAEDSHSA 52
E+DPLDAFM + + P F RR L AE H+
Sbjct: 83 EVDPLDAFMEGIHEEVKKAPVKPRPIVEELEDDEDDPMESFLKARRDAGLSLAAEALHAG 142
Query: 53 SDYELFMKRAKKK--------KRDKNREIIKSKIKI-----------DYQQLRKNFYTQA 93
D + + A K D N + K KI DY++ K+FY ++
Sbjct: 143 YDTDEEVYAAAKAVDNGQIEYDSDDNAIVTLEKKKIEALAPLDHNDVDYEKFSKDFYEES 202
Query: 94 REITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQA 149
I+ M+ AYR L +++ +P+KT+ G ++ SK +E P IQ
Sbjct: 203 DSISGMTEEEVAAYRNSLAIRVSGFDVSRPVKTFEDLGFDASLMGAISKQGYERPTPIQC 262
Query: 150 PASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVR 209
+ +++SG D + I +TGSGKT AF+LPM+ HI +QP + G + P+G++ APT EL +
Sbjct: 263 QSCPIVLSGRDLIGIAKTGSGKTAAFVLPMMVHIMDQPELGKG-EGPIGVICAPTRELAQ 321
Query: 210 Q---------------------------QVRR------------GRMIDLLCKNGVKITN 230
Q Q + GR+ID++ +K +
Sbjct: 322 QIYSEAKKFAKVHGIRISGVYGGMSKFEQFKELKAGCEVVVATPGRLIDMIK---MKALS 378
Query: 231 LTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+ R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P RVE LAR+
Sbjct: 379 MHRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPKRVERLARE 432
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+E+L + K + ++ +A V ARGLD K ++ V+N D D + +VH ++
Sbjct: 518 RMEVLQKFKNGIYHILVATDVAARGLDIKSIKTVVNVDIARDMDSHVHRIGRTGRAGDKD 577
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A ++ + A +A +LV + EL +L ++D
Sbjct: 578 GVAHTLVTGKEARFAGELVNSLIAAGQNVPTELMDLAMKD 617
>gi|302798402|ref|XP_002980961.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
gi|300151500|gb|EFJ18146.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
Length = 653
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/356 (33%), Positives = 172/356 (48%), Gaps = 90/356 (25%)
Query: 15 EIDPLDAFMNDMECSFA-------------------EHPNNCFRLGRR-----LPAEDSH 50
E+DPLDAFM + + + P F RR L AE H
Sbjct: 30 EVDPLDAFMEGIHEEVSRIPTPGSKPSRIQEEEEEEDDPMETFLKARRDAGLSLAAEALH 89
Query: 51 SA--SDYELFMK-RAKKK-----KRDKNREIIKSKIKID-----------YQQLRKNFYT 91
+ SD E++ RA +K D N I + KID Y K+FY
Sbjct: 90 AGYDSDEEVYAAARAVEKGMVDYDSDDNAIITADRKKIDPLAPLDHSQLQYAPFDKDFYE 149
Query: 92 QAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAI 147
+ I+ +S +YR+ + ++ P+P+K +++ GL + ++ +K +ENP I
Sbjct: 150 EDASISGLSEEDVTSYRQSIGVRTSGFDVPRPVKQFKELGLDSLLMGAITKQGYENPTPI 209
Query: 148 QAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL 207
Q A +++SG D + I +TGSGKT AF+LPM+ HI +Q + G + P+G++ APT EL
Sbjct: 210 QCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQEELGKG-EGPIGVICAPTREL 268
Query: 208 VRQ---QVRR------------------------------------GRMIDLLCKNGVKI 228
+Q + R+ GR+ID+L +K
Sbjct: 269 AQQIFNESRKFAKPYGIRVSGVFGGMSKLDQFKELKAGCEIVVATPGRLIDMLK---MKA 325
Query: 229 TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+ R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P RVE LAR+
Sbjct: 326 LTMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRRVETLARE 381
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEIL-ARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
RV++L K+ ++ +A V ARGLD K ++ V+N+D D + +VH ++ +
Sbjct: 467 RVDVLQGFKSGQFHVLVATDVAARGLDIKSIKTVVNYDTAKDMDTHVHRVGRTGRAGDKE 526
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ ++++ A +A DLV F EL +L ++D
Sbjct: 527 GVAYTLVTQKEARFAGDLVNGFVAAGQNVPSELMDLAMKD 566
>gi|449469020|ref|XP_004152219.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Cucumis
sativus]
Length = 777
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 169/354 (47%), Gaps = 89/354 (25%)
Query: 16 IDPLDAFMNDMECSFA-------------------EHPNNCF-----RLGRRLPAEDSHS 51
IDPLDAFM + E P F +G L A+ H+
Sbjct: 80 IDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDDEEDPMESFLRAKKDVGLTLAADALHA 139
Query: 52 ASDYELFMKRAKKK--------KRDKNREII-KSKIK---------IDYQQLRKNFYTQA 93
D + + A K D N I+ K KI+ IDY+ K+FY +
Sbjct: 140 GYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKIEPIPSLDHSSIDYEPFNKDFYEEK 199
Query: 94 REITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQA 149
I+ MS YRK L +++ P+P+KT+ G + +++ K +E P +IQ
Sbjct: 200 ASISGMSEEEVSEYRKSLAIRVSGFDVPRPVKTFEDCGFSPQLMNAIKKQGYEKPTSIQC 259
Query: 150 PASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVR 209
A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++ P+G++ APT EL
Sbjct: 260 QAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEGPIGVICAPTRELAH 318
Query: 210 Q---------------------------QVRR------------GRMIDLLCKNGVKITN 230
Q Q++ GR+ID++ +K
Sbjct: 319 QIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIK---LKALT 375
Query: 231 LTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+++ TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P +VE LAR+
Sbjct: 376 MSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLARE 429
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC-- 333
R+E L + K+ V ++ IA V ARGLD K ++ V+NFD D + +VH ++
Sbjct: 515 RMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKD 574
Query: 334 --AFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A I+++ A +A +LV + EL +L ++D
Sbjct: 575 GRAHTLITQKEARFAGELVNSLIAAGQNVSVELMDLAMKD 614
>gi|449484206|ref|XP_004156816.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
24-like [Cucumis sativus]
Length = 774
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/354 (32%), Positives = 167/354 (47%), Gaps = 89/354 (25%)
Query: 16 IDPLDAFMNDMECSFA-------------------EHPNNCF-----RLGRRLPAEDSHS 51
IDPLDAFM + E P F +G L A+ H+
Sbjct: 83 IDPLDAFMEGIHEEMKAPPPPKPKEKVDKYRDDDEEDPMESFLRAKKDVGLTLAADALHA 142
Query: 52 ASDYELFMKRAKKK--------KRDKNREIIKSK----------IKIDYQQLRKNFYTQA 93
D + + A K D N I++ K IDY+ K+FY +
Sbjct: 143 GYDSDEEVYAAAKAVDAGMVEYDSDDNMLIVEKKKXEPIPSLDHSSIDYEPFNKDFYEEK 202
Query: 94 REITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQA 149
I+ MS YRK L +++ P+P+KT+ G + +++ K +E P +IQ
Sbjct: 203 ASISGMSEEEVSEYRKSLAIRVSGFDVPRPVKTFEDCGFSPQLMNAIKKQGYEKPTSIQC 262
Query: 150 PASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVR 209
A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++ P+G++ APT EL
Sbjct: 263 QAMPIVLSGGDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEGPIGVICAPTRELAH 321
Query: 210 Q---------------------------QVRR------------GRMIDLLCKNGVKITN 230
Q Q++ GR+ID++ +K
Sbjct: 322 QIYLECKKFSKAHGLRVSAVYGGMSKFDQLKELKAGCEIVVATPGRLIDMIK---LKALT 378
Query: 231 LTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+++ TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P +VE LAR+
Sbjct: 379 MSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRKVEKLARE 432
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC-- 333
R+E L + K+ V ++ IA V ARGLD K ++ V+NFD D + +VH ++
Sbjct: 518 RMETLQKFKSGVYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKD 577
Query: 334 --AFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A I+++ A +A +LV + EL +L ++D
Sbjct: 578 GRAHTLITQKEARFAGELVNSLIAAGQNVSVELMDLAMKD 617
>gi|356505639|ref|XP_003521597.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 782
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 151/283 (53%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
IDY+ K+FY + I+ MS YRK L +++ PKPIK + G +++I+
Sbjct: 192 IDYEPFTKDFYEETPSISGMSEQDVSEYRKSLAIRVSGFDVPKPIKAFEDCGFSSQIMNA 251
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E P IQ A +++SG D + I +TGSGKT +F+LPM+ HI +QP + ++
Sbjct: 252 IKKQGYEKPTTIQCQALPVVLSGRDIIGIAKTGSGKTASFVLPMIVHIMDQPELQK-EEG 310
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 311 PIGVICAPTRELAHQIFLEAKKFAKAYGVRVSAVYGGMSKLEQFKELKAGCEIVVATPGR 370
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID+L +K + R TYLVLDEADRMFD+GFEPQ+ IV IRPDRQ +LFS T P
Sbjct: 371 LIDML---KMKALTMMRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPC 427
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + + I +V G+ +++ V++ P+D E
Sbjct: 428 KVEKLARE--ILSDPIRVTVGEVGMANEDITQVVHV-TPSDSE 467
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R++IL + K+ + ++ IA V ARGLD K ++ V+NFD D + +VH ++
Sbjct: 521 RMDILQKFKSGLYHVLIATDVAARGLDIKSIKSVVNFDIAKDMDMHVHRIGRTGRAGDKD 580
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+ + A +A +LV + EL +L ++D
Sbjct: 581 GVAYTLITLKEARFAGELVNSLVAAGQNVSVELMDLAMKD 620
>gi|328771122|gb|EGF81162.1| hypothetical protein BATDEDRAFT_10391 [Batrachochytrium
dendrobatidis JAM81]
Length = 521
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/261 (39%), Positives = 139/261 (53%), Gaps = 50/261 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
+DY KNFYT+ ++I+++S R+QLD+++ K P+P ++ G +L
Sbjct: 22 MDYPDFSKNFYTEHQDISQLSDTQVQTIRQQLDMRVFGKHVPRPCISFAHFGFDESLLNC 81
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K + P IQ A + +SG D + I +TGSGKT AFL PML H+ +QP + G D
Sbjct: 82 IIKHGYTEPTGIQRQAVPVALSGHDLIGIAQTGSGKTAAFLWPMLVHLMDQPELERG-DG 140
Query: 196 PVGLVMAPTGELVRQ----------------------------QVRR------------G 215
P+GLV+APT EL Q Q + G
Sbjct: 141 PIGLVLAPTRELAHQIYLEAKKFSKAYQGVRVTVLYGGVSKNDQFKELRAGVEILVATPG 200
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+IDL+ +K TNLTRVTYLVLDEAD+M ++GFEPQ+ I +IRPDRQ +LFS TF
Sbjct: 201 RLIDLI---KMKATNLTRVTYLVLDEADQMLNLGFEPQVRSICDHIRPDRQTLLFSATFR 257
Query: 276 PRVEILARK--TNVCNLSIAN 294
R+E L R N +SI N
Sbjct: 258 KRIEHLVRALLNNPTRISIGN 278
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ + ++ V +RGLD K ++ VIN+D D + YVH ++ K A+ I+
Sbjct: 362 KSGKSRVLVSTDVASRGLDIKGVKTVINYDVSKDIDSYVHRIGRTGRAGEKGTAYTLITM 421
Query: 341 ENAIYATDLVKAFE 354
+ +A+DLV+ E
Sbjct: 422 QEDRFASDLVQLME 435
>gi|254586127|ref|XP_002498631.1| ZYRO0G14960p [Zygosaccharomyces rouxii]
gi|238941525|emb|CAR29698.1| ZYRO0G14960p [Zygosaccharomyces rouxii]
Length = 831
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 160/292 (54%), Gaps = 59/292 (20%)
Query: 44 LPAEDSHSASDYE----LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQA------ 93
+P+++ +SD + F K AK K + + +EI + ++ + RK+FY+Q
Sbjct: 157 VPSDEKEMSSDEDEEGFKFAKIAKMKSKKQVKEIRYERNEL--ESFRKDFYSQLPQALLS 214
Query: 94 -REITRMSPAYRKQL-DLKIREKCAPKPIKTWRQTGLTTKILETF-SKLNHENPVAIQAP 150
EI+ + R L ++K+R P PI W Q GLT+ I + L ENP +IQA
Sbjct: 215 DNEISEL----RLNLGNIKVRGDGCPLPITRWSQLGLTSDITSVLINDLKFENPTSIQAQ 270
Query: 151 ASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL--- 207
A I+ G D + I++TGSGKT+++LLP++RHI Q + + P+GLV+APT EL
Sbjct: 271 AIPAIMCGRDVIGISKTGSGKTISYLLPLIRHIKAQRHLASDESGPLGLVLAPTRELAIQ 330
Query: 208 -------------------------VRQQVRR------------GRMIDLLCKNGVKITN 230
+++Q+R+ GR IDLL N K+ +
Sbjct: 331 INEEVTKFTAKDKSVNSVCCTGGSELKEQIRKLKKGIEIVVATPGRFIDLLTLNTGKLLS 390
Query: 231 LTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILA 282
R+T++++DEADR+FDMGFEPQIT+I++ IRPD+Q VLFS TFP ++ A
Sbjct: 391 TRRITFVIMDEADRLFDMGFEPQITQIMKTIRPDKQCVLFSATFPNKLRNFA 442
>gi|357511395|ref|XP_003625986.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355501001|gb|AES82204.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 775
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 152/284 (53%), Gaps = 50/284 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY+ K+FY ++ I+ MS YRK L +++ PKP+KT+ G +I+
Sbjct: 185 EIDYEPFNKDFYEESPSISGMSEQDVIDYRKSLAIRVSGFEVPKPVKTFEDCGFAPQIMG 244
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K +E P +IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 245 AIKKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQK-EE 303
Query: 195 SPVGLVMAPTGELVRQ---------------------------QVRR------------G 215
P+G++ APT EL Q Q + G
Sbjct: 304 GPIGVICAPTRELAHQIYLEAKKFAKAYGIRVSAVYGGMSKLEQFKELKAGCEIVVATPG 363
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID+L +K + R TYLVLDEADRMFD+GFEPQ+ IV IRPDRQ +LFS T P
Sbjct: 364 RLIDMLK---MKALAMLRATYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMP 420
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + + I +V G+ +++ V+ P+D E
Sbjct: 421 RKVEKLARE--ILSDPIRVTVGEVGMANEDITQVVQV-IPSDSE 461
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R++IL + K+ ++ IA V ARGLD K ++ V+NFD D + +VH ++
Sbjct: 515 RMDILQKFKSGAYHVLIATDVAARGLDIKSIKTVVNFDIAKDMDMHVHRIGRTGRAGDKD 574
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ A +A +LV + EL +L ++D
Sbjct: 575 GVAYTLITQKEARFAGELVNSLVAAGQNVSTELMDLAMKD 614
>gi|56201870|dbj|BAD73320.1| putative ethylene-responsive RNA helicase [Oryza sativa Japonica
Group]
Length = 521
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 131/217 (60%), Gaps = 21/217 (9%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY ++ + M+ AYR++ ++ + + PKP++ +R G +L+ +K
Sbjct: 50 RFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKA 109
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PGD P+ L
Sbjct: 110 GFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGD-GPIVL 168
Query: 200 VMAPTGEL---VRQQVRR----------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246
V+APT EL ++Q+ + GR+ID++ + TNL RVTYLVLDEADRM
Sbjct: 169 VLAPTRELAVQIQQEATKFGVEIVIATPGRLIDMIESHH---TNLRRVTYLVLDEADRML 225
Query: 247 DMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
DMGFEPQI +IV IRPDRQ + +S T+P VE LAR
Sbjct: 226 DMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLAR 262
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 357 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA 416
Query: 341 ENAIYATDLVKAFE 354
NA +A DL+ E
Sbjct: 417 ANARFAKDLINILE 430
>gi|222617918|gb|EEE54050.1| hypothetical protein OsJ_00740 [Oryza sativa Japonica Group]
Length = 468
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 131/217 (60%), Gaps = 21/217 (9%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY ++ + M+ AYR++ ++ + + PKP++ +R G +L+ +K
Sbjct: 50 RFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKA 109
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PGD P+ L
Sbjct: 110 GFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGD-GPIVL 168
Query: 200 VMAPTGEL---VRQQVRR----------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246
V+APT EL ++Q+ + GR+ID++ + TNL RVTYLVLDEADRM
Sbjct: 169 VLAPTRELAVQIQQEATKFGVEIVIATPGRLIDMIESHH---TNLRRVTYLVLDEADRML 225
Query: 247 DMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
DMGFEPQI +IV IRPDRQ + +S T+P VE LAR
Sbjct: 226 DMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLAR 262
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 357 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA 416
Query: 341 ENAIYATDLVKAFE 354
NA +A DL+ E
Sbjct: 417 ANARFAKDLINILE 430
>gi|302815317|ref|XP_002989340.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
gi|300142918|gb|EFJ09614.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
Length = 653
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 120/357 (33%), Positives = 172/357 (48%), Gaps = 90/357 (25%)
Query: 15 EIDPLDAFMNDMECSFA-------------------EHPNNCFRLGRR-----LPAEDSH 50
E+DPLDAFM + + + P F RR L AE H
Sbjct: 30 EVDPLDAFMEGIHEEVSRIPTPGSKPSRIQEEEEEEDDPMETFLKARRDAGLSLAAEALH 89
Query: 51 SA--SDYELFMK-RAKKK-----KRDKNREIIKSKIKID-----------YQQLRKNFYT 91
+ SD E++ RA +K D N I + KID Y K+FY
Sbjct: 90 AGYDSDEEVYAAARAVEKGMVDYDSDDNAIITADRKKIDPLAPLDHSQLQYAPFDKDFYE 149
Query: 92 QAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAI 147
+ I+ +S +YR+ + ++ P+P++ +++ GL + ++ +K +ENP I
Sbjct: 150 EDASISGLSEEDVTSYRQSIGVRTSGFDVPRPVRQFKELGLDSLLMGAITKQGYENPTPI 209
Query: 148 QAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL 207
Q A +++SG D + I +TGSGKT AF+LPM+ HI +Q + G + P+G++ APT EL
Sbjct: 210 QCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQEELGKG-EGPIGVICAPTREL 268
Query: 208 VRQ---QVRR------------------------------------GRMIDLLCKNGVKI 228
+Q + R+ GR+ID+L +K
Sbjct: 269 AQQIFNESRKFAKPYGIRVSGVFGGMSKLDQFKELKAGCEIVVATPGRLIDMLK---MKA 325
Query: 229 TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+ R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P RVE LAR+
Sbjct: 326 LTMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPRRVETLAREV 382
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEIL-ARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
RV++L K+ ++ +A V ARGLD K ++ V+N+D D + +VH ++ +
Sbjct: 467 RVDVLQGFKSGQFHVLVATDVAARGLDIKSIKTVVNYDTAKDMDTHVHRVGRTGRAGDKE 526
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ ++++ A +A DLV F EL +L ++D
Sbjct: 527 GVAYTLVAQKEARFAGDLVNGFVAAGQNVPSELMDLAMKD 566
>gi|18407327|ref|NP_566099.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
gi|75318047|sp|O22907.2|RH24_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|16323192|gb|AAL15330.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|20196880|gb|AAB63833.2| putative ATP-dependent RNA helicase [Arabidopsis thaliana]
gi|21700913|gb|AAM70580.1| At2g47330/T8I13.17 [Arabidopsis thaliana]
gi|330255734|gb|AEC10828.1| DEAD-box ATP-dependent RNA helicase 24 [Arabidopsis thaliana]
Length = 760
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 154/283 (54%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
IDY+ + K+FY + I+ M+ YR++L +++ +P+KT+ G +++I+
Sbjct: 183 IDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSA 242
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E P AIQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + D+
Sbjct: 243 IKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPE-LQRDEG 301
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 302 PIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGR 361
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID+L +K + R +YLVLDEADRMFD+GFEPQ+ IV IRPDRQ +LFS T P
Sbjct: 362 LIDMLK---MKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPW 418
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + + I +V G+ +++ V+N P+D E
Sbjct: 419 KVEKLARE--ILSDPIRVTVGEVGMANEDITQVVNV-IPSDAE 458
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSW----LK 331
R+E L + K+ V ++ IA V ARGLD K L+ V+N+D D + +VH ++
Sbjct: 512 RMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRD 571
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ +++ A +A +LV + EL++L ++D
Sbjct: 572 GVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDLAMKD 611
>gi|224064557|ref|XP_002301515.1| predicted protein [Populus trichocarpa]
gi|222843241|gb|EEE80788.1| predicted protein [Populus trichocarpa]
Length = 807
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 144/264 (54%), Gaps = 49/264 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y+ K+FY ++ I+ MS Y K L +++ P+PIKT+ G + +++
Sbjct: 180 IEYEPFSKDFYEESPSISEMSEQDVAEYMKSLAIRVSGFEVPRPIKTFEDCGFSPQLMNA 239
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K +E P IQ A +++SG D + + +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 240 IAKQGYEKPTPIQCQALPIVLSGSDIIGMAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEG 298
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G+V APT EL Q Q + GR
Sbjct: 299 PIGVVCAPTRELAHQIYLETKKFSKSHGIRVSAVYGGMSKLDQFKELKAGCEIVIATPGR 358
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID+L +K N++R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P
Sbjct: 359 LIDMLK---MKALNMSRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPR 415
Query: 277 RVEILARK--TNVCNLSIANSVRA 298
++E LAR+ T+ +++ RA
Sbjct: 416 KIEKLAREILTDPVRVTVGEVGRA 439
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+EIL + K+ V ++ +A V ARGLD K ++ V+NFD + + +VH ++
Sbjct: 509 RMEILQKFKSGVYHVLVATDVAARGLDIKSIKSVVNFDIAREMDVHVHRIGRTGRAGDKD 568
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ A +A +LV + EL +L ++D
Sbjct: 569 GIAYTLITQKEARFAGELVNSLIAAGQNVSVELMDLAMKD 608
>gi|218187683|gb|EEC70110.1| hypothetical protein OsI_00766 [Oryza sativa Indica Group]
Length = 470
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 131/217 (60%), Gaps = 21/217 (9%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY ++ + M+ AYR++ ++ + + PKP++ +R G +L+ +K
Sbjct: 52 RFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKA 111
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PGD P+ L
Sbjct: 112 GFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPGD-GPIVL 170
Query: 200 VMAPTGEL---VRQQVRR----------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246
V+APT EL ++Q+ + GR+ID++ + TNL R+TYLVLDEADRM
Sbjct: 171 VLAPTRELAVQIQQEATKFGVEIVIATPGRLIDMIESHH---TNLRRITYLVLDEADRML 227
Query: 247 DMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
DMGFEPQI +IV IRPDRQ + +S T+P VE LAR
Sbjct: 228 DMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQLAR 264
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 359 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA 418
Query: 341 ENAIYATDLVKAFE 354
NA +A DL+ E
Sbjct: 419 ANARFAKDLINILE 432
>gi|158289704|ref|XP_311375.4| AGAP010656-PA [Anopheles gambiae str. PEST]
gi|157018455|gb|EAA07045.4| AGAP010656-PA [Anopheles gambiae str. PEST]
Length = 968
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 142/491 (28%), Positives = 212/491 (43%), Gaps = 150/491 (30%)
Query: 16 IDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSH-SASDYELFMKRAKKKKRDKNREII 74
IDPLDAFM ++ E +L LP D S+S + AK+K+ K E+I
Sbjct: 231 IDPLDAFMKEVN----EEVRKVNKLSNPLPKTDGKASSSGVTIITGVAKQKQETKKGELI 286
Query: 75 K--------------------------------SKIK---IDYQQLRKNFYTQAREITRM 99
+ +KI I+Y RK+FY + EI RM
Sbjct: 287 EQNQDGLEYSSEEEQEDIKDTAANLANKQKKELAKIDHSGINYMPFRKSFYVEVPEIARM 346
Query: 100 SP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASAL 154
+ AY+K+L+ + ++ K PKPIKTW G++ K E KL E P IQ A
Sbjct: 347 TQTEIDAYKKELEGIAVKGKGCPKPIKTWAHCGVSRKEFEVLRKLGFEKPTPIQCQAIPA 406
Query: 155 IISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---- 210
I+SG D + I +TGSGKTLAF+LPM RH+ +QPP+ G D P+ ++M PT EL Q
Sbjct: 407 IMSGRDLIGIAKTGSGKTLAFILPMFRHLLDQPPLEDG-DGPIAIIMTPTRELCMQIGKD 465
Query: 211 --------------------------QVRR---------GRMIDLLCKNGVKITNLTRVT 235
+++R GRMID+L N ++TNL RV
Sbjct: 466 IKKFSKSLNLRTACVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRV- 524
Query: 236 YLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANS 295
RI+ N+RPDRQ V+FS TFP ++E LAR+ + I
Sbjct: 525 -------------------MRIIDNVRPDRQTVMFSATFPRQMEALARR--ILKKPIEVQ 563
Query: 296 VRARGLDEKELE---LVINFDAPN--------------------DYEDYVHHCCQSWLKS 332
V R + K++E +V++ +A D ++ + +K+
Sbjct: 564 VGGRSVVCKDVEQHVVVLDDEAKFFKLLELLGIYQEQGSIIVFVDKQENADSLLKDLMKA 623
Query: 333 C--------------------AFRFISEENAIYATDLVKAFELSELVVRDDLKAVADSFI 372
A+ F++ E Y+ D+++A ELS V +DL+ + D++
Sbjct: 624 SYPCMSLHGGIDQFDRDDYGFAWTFLTPEQGRYSGDIIRALELSGGTVPEDLRNLWDTYK 683
Query: 373 AKVNLGLGQVH 383
A +VH
Sbjct: 684 AAQEAEGKKVH 694
>gi|255548421|ref|XP_002515267.1| hypothetical protein RCOM_1346600 [Ricinus communis]
gi|223545747|gb|EEF47251.1| hypothetical protein RCOM_1346600 [Ricinus communis]
Length = 791
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 152/283 (53%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
IDY+ K+FY + I+ MS YRK L +++ P+PIK++ + +++
Sbjct: 179 IDYEPFNKDFYEEKPSISGMSEQDVAEYRKSLAIRVSGFDVPRPIKSFEDCSFSMQLMNA 238
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E P +IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 239 IVKQGYEKPTSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELQK-EEG 297
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 298 PIGVICAPTRELAHQIYLEAKKFSKSHGIRVSAVYGGMSKLEQFKELKAGCDIVVATPGR 357
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDLL +K N+++ TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P
Sbjct: 358 LIDLLK---MKALNMSKATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPR 414
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + + I +V G+ +++ V+ P+D E
Sbjct: 415 KVEKLARE--ILSDPIRVTVGEVGMANEDITQVVQV-IPSDAE 454
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+EIL + K+ V ++ IA V ARGLD K L+ V+NFD D + +VH ++
Sbjct: 508 RMEILQKFKSGVYHVLIATDVAARGLDIKSLKSVVNFDIARDMDMHVHRIGRTGRAGDKD 567
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ A +A +LV + EL +L ++D
Sbjct: 568 GTAYTLITQKEARFAGELVNSLIAAGQNVSGELMDLAMKD 607
>gi|427788695|gb|JAA59799.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 870
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 135/247 (54%), Gaps = 47/247 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y++ KNFY + EI +S A R +L +K+ PKP+ ++ G +L+
Sbjct: 224 IEYKEFTKNFYVEHEEIAALSDAEVDQLRAKLGVKVTGAIPPKPVTSFGHLGFDESMLKA 283
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K + P IQA + +SG D + I +TGSGKT AF+ P+L HI +Q + PG +
Sbjct: 284 IRKAEYTQPSPIQAQGVPVALSGRDMIGIAKTGSGKTAAFIWPLLTHIMDQRELAPG-EG 342
Query: 196 PVGLVMAPTGELVRQ---QVRR------------------------------------GR 216
P+GL++APT EL +Q + +R GR
Sbjct: 343 PIGLILAPTRELAQQIYLEAKRFGKVYGVAAACCFGGGSKWEQSKALQEGAEIVVATPGR 402
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID++ +K TNL RVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ ++FS TF
Sbjct: 403 MIDMIK---MKATNLERVTFLVLDEADRMFDMGFEPQVRSICDHVRPDRQTLMFSATFKR 459
Query: 277 RVEILAR 283
+VE LAR
Sbjct: 460 KVERLAR 466
>gi|366996048|ref|XP_003677787.1| hypothetical protein NCAS_0H01280 [Naumovozyma castellii CBS 4309]
gi|342303657|emb|CCC71438.1| hypothetical protein NCAS_0H01280 [Naumovozyma castellii CBS 4309]
Length = 887
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 167/342 (48%), Gaps = 71/342 (20%)
Query: 17 DPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKN------ 70
DPLD FMN + S A N R A D A D L + +K +
Sbjct: 168 DPLDEFMNSLGNSSA----NSTSFEGRTIAGDLLDAEDESLMTGISHEKPSTDDGVENSR 223
Query: 71 -------------REIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQL-----DLKIR 112
E++ K + + +KNFY + +I +MS + ++L ++K++
Sbjct: 224 YTKLAKLKAKKKVTEVLYDKSTL--EPFQKNFYAEPEDIKQMSDSEIEELRLSLDNIKVK 281
Query: 113 EKCAPKPIKTWRQTGLTTKILETFSK-LNHENPVAIQAPASALIISGLDSVAITETGSGK 171
P PI W Q GL T + +K L +E IQ+ A I+SG D + I++TGSGK
Sbjct: 282 GTNCPLPITRWSQLGLNTDTMNLITKNLRYETLTPIQSQAIPAIMSGRDVIGISKTGSGK 341
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---QVRR-------------- 214
T+++LLP+LRHI Q P+ + P+GL++APT EL Q ++ R
Sbjct: 342 TISYLLPLLRHIKAQRPLSKNETGPLGLILAPTRELALQIHDEIERFIVHDENIRSICCT 401
Query: 215 -----------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFE 251
GR IDLL N K+ + R+T++++DEADR+FD+GFE
Sbjct: 402 GGSELKKQINDLKRGVQIVVATPGRFIDLLTLNTGKLVSTERITFVIMDEADRLFDLGFE 461
Query: 252 PQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIA 293
PQIT+I++ IRPD+Q VLFS TFP ++ A + LSI
Sbjct: 462 PQITQIMKTIRPDKQCVLFSATFPNKLRNFAMRILNSPLSIT 503
>gi|221482438|gb|EEE20786.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
Length = 1544
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 136/249 (54%), Gaps = 49/249 (19%)
Query: 82 YQQLRKNFYTQAREITRMSP----AYRK-QLDLKIREKCAPKPIKTWRQTGLTTKILETF 136
Y ++KN Y Q +EIT M A RK ++K+R K P+PI T+ Q GL KI++
Sbjct: 929 YPPIKKNLYIQVKEITCMKDHEVDALRKTHGNIKVRGKQCPRPITTFFQCGLPDKIVKYL 988
Query: 137 SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD--D 194
+ P IQ A ++ G D +A+ ETGSGKTLA+ LP++RH+ V D D
Sbjct: 989 TLRGITEPFPIQMQAIPCLMCGRDVIAVAETGSGKTLAYGLPLIRHVLS---VKQQDFRD 1045
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
+ LV+APT EL Q ++ R G
Sbjct: 1046 GAIALVIAPTRELCNQIFKEINRCCKLVDLNAVACYGGAGIGSQLGAIKRGVEVIVGTPG 1105
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID+L NG ++T+L RVT++VLDEADRMFD GFEPQ+T I+ + RPDRQ LFS TFP
Sbjct: 1106 RLIDILTMNGGRLTSLKRVTFIVLDEADRMFDFGFEPQVTSIIASSRPDRQTCLFSATFP 1165
Query: 276 PRVEILARK 284
P +E LAR+
Sbjct: 1166 PHIEALARR 1174
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 286 NVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEEN 342
V L IA SV ARGLD K LVIN PN EDYVH ++ A+ F+++E+
Sbjct: 1269 GVRTLLIATSVAARGLDCKHCVLVINMTCPNHIEDYVHRIGRTGRAGRIGVAYTFLTKED 1328
Query: 343 AIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGL 379
A A DL KA S V L ++ + + NLG+
Sbjct: 1329 ADKADDLEKALTQSGQAVPQALSDLSAQYKQECNLGM 1365
>gi|221504486|gb|EEE30159.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 1544
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 136/249 (54%), Gaps = 49/249 (19%)
Query: 82 YQQLRKNFYTQAREITRMSP----AYRK-QLDLKIREKCAPKPIKTWRQTGLTTKILETF 136
Y ++KN Y Q +EIT M A RK ++K+R K P+PI T+ Q GL KI++
Sbjct: 929 YPPIKKNLYIQVKEITCMKDHEVDALRKTHGNIKVRGKQCPRPITTFFQCGLPDKIVKYL 988
Query: 137 SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD--D 194
+ P IQ A ++ G D +A+ ETGSGKTLA+ LP++RH+ V D D
Sbjct: 989 TLRGITEPFPIQMQAIPCLMCGRDVIAVAETGSGKTLAYGLPLIRHVLS---VKQQDFRD 1045
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
+ LV+APT EL Q ++ R G
Sbjct: 1046 GAIALVIAPTRELCNQIFKEINRCCKLVDLNAVACYGGAGIGSQLGAIKRGVEVIVGTPG 1105
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID+L NG ++T+L RVT++VLDEADRMFD GFEPQ+T I+ + RPDRQ LFS TFP
Sbjct: 1106 RLIDILTMNGGRLTSLKRVTFIVLDEADRMFDFGFEPQVTSIIASSRPDRQTCLFSATFP 1165
Query: 276 PRVEILARK 284
P +E LAR+
Sbjct: 1166 PHIEALARR 1174
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 286 NVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEEN 342
V L IA SV ARGLD K LVIN PN EDYVH ++ A+ F+++E+
Sbjct: 1269 GVRTLLIATSVAARGLDCKHCVLVINMTCPNHIEDYVHRIGRTGRAGRIGVAYTFLTKED 1328
Query: 343 AIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGL 379
A A DL KA S V L ++ + + NLG+
Sbjct: 1329 ADKADDLEKALTQSGQAVPQALSDLSAQYKQECNLGM 1365
>gi|237841393|ref|XP_002369994.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211967658|gb|EEB02854.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 1544
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 101/249 (40%), Positives = 136/249 (54%), Gaps = 49/249 (19%)
Query: 82 YQQLRKNFYTQAREITRMSP----AYRK-QLDLKIREKCAPKPIKTWRQTGLTTKILETF 136
Y ++KN Y Q +EIT M A RK ++K+R K P+PI T+ Q GL KI++
Sbjct: 929 YPPIKKNLYIQVKEITCMKDHEVDALRKTHGNIKVRGKQCPRPITTFFQCGLPDKIVKYL 988
Query: 137 SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD--D 194
+ P IQ A ++ G D +A+ ETGSGKTLA+ LP++RH+ V D D
Sbjct: 989 TLRGITEPFPIQMQAIPCLMCGRDVIAVAETGSGKTLAYGLPLIRHVLS---VKQQDFRD 1045
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
+ LV+APT EL Q ++ R G
Sbjct: 1046 GAIALVIAPTRELCNQIFKEINRCCKLVDLNAVACYGGAGIGSQLGAIKRGVEVIVGTPG 1105
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID+L NG ++T+L RVT++VLDEADRMFD GFEPQ+T I+ + RPDRQ LFS TFP
Sbjct: 1106 RLIDILTMNGGRLTSLKRVTFIVLDEADRMFDFGFEPQVTSIIASSRPDRQTCLFSATFP 1165
Query: 276 PRVEILARK 284
P +E LAR+
Sbjct: 1166 PHIEALARR 1174
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 286 NVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEEN 342
V L IA SV ARGLD K LVIN PN EDYVH ++ A+ F+++E+
Sbjct: 1269 GVRTLLIATSVAARGLDCKHCVLVINMTCPNHIEDYVHRIGRTGRAGRIGVAYTFLTKED 1328
Query: 343 AIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGL 379
A A DL KA S V L ++ + + NLG+
Sbjct: 1329 ADKADDLEKALTQSGQAVPQALSDLSAQYKQECNLGM 1365
>gi|255572963|ref|XP_002527412.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223533222|gb|EEF34978.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 505
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 142/268 (52%), Gaps = 48/268 (17%)
Query: 61 RAKKKKRDKNREIIKSKIKID-YQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKC 115
R+ ++R+ +R I K +D KNFY ++ + MS YR++ ++ + +
Sbjct: 34 RSSSERREYDRAISPRKSDLDGLTPFEKNFYVESPSVAAMSEREVEEYRQRREITVEGRD 93
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP+K++R G +LE ++ P IQA + + G D + I ETGSGKTLA+
Sbjct: 94 VPKPVKSFRDVGFPDYVLEEVTRAGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAY 153
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLP + H+ QP + PG D P+ LV+APT EL Q
Sbjct: 154 LLPAIVHVNAQPILAPG-DGPIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIYGGVPK 212
Query: 211 --QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
QVR GR+ID+L + TNL RVTYLVLDEADRM DMGF+PQI +
Sbjct: 213 GPQVRDLQKGVEIVIATPGRLIDMLESHH---TNLRRVTYLVLDEADRMLDMGFDPQIRK 269
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARK 284
IV IRPDRQ + +S T+P VE LAR+
Sbjct: 270 IVSQIRPDRQTLYWSATWPKEVEQLARQ 297
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 391 KAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA 450
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A +L+ E + V +L A+
Sbjct: 451 SNARFAKELISILEEAGQKVSPELAAMG 478
>gi|225437591|ref|XP_002277419.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Vitis vinifera]
gi|297743992|emb|CBI36962.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 135/248 (54%), Gaps = 47/248 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y+ K+FY + I+ M+ YRK L +++ P+PIKT+ G + +++
Sbjct: 181 IEYEPFNKDFYEEKDSISGMTEQDVTEYRKSLSIRVSGFDVPRPIKTFEDCGFSPQLMNA 240
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K +E P IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 241 ITKQGYEKPTPIQCQAFPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELAK-EEG 299
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 300 PIGVICAPTRELAHQIYLESKKFAKPYGIRVSAIYGGMSKLEQFKELKSGCEIVIATPGR 359
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID++ +K + R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P
Sbjct: 360 LIDMIK---MKALTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPR 416
Query: 277 RVEILARK 284
+VE LAR+
Sbjct: 417 KVEKLARE 424
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R++IL + K+ + ++ IA V ARGLD K ++ V+NFD D + +VH ++
Sbjct: 510 RMDILQKFKSGIYHVLIATDVAARGLDIKSIKSVVNFDIARDMDAHVHRIGRTGRAGDKD 569
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+ + A +A +LV + EL +L ++D
Sbjct: 570 GTAYTLITHKEARFAGELVGSLIAAGQNVPMELMDLAMKD 609
>gi|147821303|emb|CAN74586.1| hypothetical protein VITISV_041989 [Vitis vinifera]
Length = 771
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 135/248 (54%), Gaps = 47/248 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y+ K+FY + I+ M+ YRK L +++ P+PIKT+ G + +++
Sbjct: 181 IEYEPFNKDFYEEKDSISGMTEQDVTEYRKSLSIRVSGFDVPRPIKTFEDCGFSPQLMNA 240
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K +E P IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 241 ITKQGYEKPTPIQCQAFPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELAK-EEG 299
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 300 PIGVICAPTRELAHQIYLESKKFAKPYGIRVSAIYGGMSKLEQFKELKSGCEIVIATPGR 359
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID++ +K + R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P
Sbjct: 360 LIDMIK---MKALTMLRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPR 416
Query: 277 RVEILARK 284
+VE LAR+
Sbjct: 417 KVEKLARE 424
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R++IL + K+ + ++ IA V ARGLD K ++ V+NFD D + +VH ++
Sbjct: 510 RMDILQKFKSGIYHVLIATDVAARGLDIKSIKSVVNFDIARDMDAHVHRIGRTGRAGDKD 569
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+ + A +A +LV + EL +L ++D
Sbjct: 570 GTAYTLITHKEARFAGELVGSLIAAGQNVPMELMDLAMKD 609
>gi|149242263|ref|XP_001526437.1| hypothetical protein LELG_02995 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032665|sp|A5E058.1|PRP5_LODEL RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|146450560|gb|EDK44816.1| hypothetical protein LELG_02995 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 994
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 138/250 (55%), Gaps = 46/250 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I+Y + RK+FY E++ M R +LD ++ R K P P TW Q + ++
Sbjct: 341 IEYPKFRKHFYQVPFEMSTMDNRELDMLRLELDNVRARGKNVPPPFLTWGQLLMPESVMS 400
Query: 135 TF-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ L P IQ A +++SG D + + +TGSGKTL+++LPM+RHI +Q PG+
Sbjct: 401 VIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGE 460
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRRG-------- 215
P+GLV++PT EL Q +++RG
Sbjct: 461 -GPIGLVLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATP 519
Query: 216 -RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
R+IDLL NG +IT L R T++VLDEADRMFDMGFEPQI +I IRPD+Q VLFS TF
Sbjct: 520 GRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATF 579
Query: 275 PPRVEILARK 284
P ++E LA+K
Sbjct: 580 PRKLEQLAKK 589
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC---AFRFISEENAIY 345
N+ IA S+ ARGLD + L+LV+NF+ P+ EDYVH ++ A F+
Sbjct: 698 NVLIATSIAARGLDVRNLDLVVNFEPPSHLEDYVHRVGRTGRAGKHGEAITFVDNTQEKE 757
Query: 346 ATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQL 405
+ LVKA ++S V L+ +AD F+ K+ G + +G GG L ++ QL
Sbjct: 758 ISILVKALKMSSRAVDSKLQEIADKFMKKIESG-EEKRSSGFGGKGLEKLQNVRETNMQL 816
Query: 406 RKAQ----AKEYGFGEDKSDSEDVD 426
+K KE G + SE VD
Sbjct: 817 QKKMFGNFKKEDGKKSHRDLSEQVD 841
>gi|307190551|gb|EFN74538.1| ATP-dependent RNA helicase DDX42 [Camponotus floridanus]
Length = 769
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 133/248 (53%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ KNFY EI +S +K L +K+ P P+ ++ G +++
Sbjct: 208 EIEYETFDKNFYNVHEEIASLSKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALMK 267
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
T K + P IQA A +SG D + I +TGSGKT AF+ PML HI +Q + G D
Sbjct: 268 TIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKAG-D 326
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------G 215
P+GL++APT EL + Q+ ++ G
Sbjct: 327 GPIGLILAPTRELSQQIYQEAKKFGKVYNIQVCCCYGGGSKWEQSKALESGAEIVVATPG 386
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMIDL+ +K TNLTRVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 387 RMIDLV---KMKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFK 443
Query: 276 PRVEILAR 283
+VE LAR
Sbjct: 444 KKVEKLAR 451
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 283 RKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFIS 339
+K +V L +A V ARGLD ++ V+N+D D + + H ++ K A+ ++
Sbjct: 547 KKKDVSTL-VATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLVT 605
Query: 340 EENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
E++ +A LV+ E + V L A+ ++ K G+ GG L R
Sbjct: 606 EKDKEFAGHLVRNLEGANQEVSKSLMDLAMQSAWFRKSRFKGGKGKSLNIGGAGLGFRGR 665
>gi|322799398|gb|EFZ20748.1| hypothetical protein SINV_08125 [Solenopsis invicta]
Length = 764
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 133/248 (53%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ KNFY EI +S +K L +K+ P P+ ++ G +++
Sbjct: 208 EIEYEPFEKNFYNVHEEIASLSKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALIK 267
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
T K + P IQA A +SG D + I +TGSGKT AF+ PML HI +Q + G D
Sbjct: 268 TIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKAG-D 326
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------G 215
P+GL++APT EL + Q+ ++ G
Sbjct: 327 GPIGLILAPTRELSQQIYQEAKKFGKVYNIQVCCCYGGGSKWEQSKALESGAEIVVATPG 386
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMIDL+ +K TNLTRVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 387 RMIDLVK---MKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFK 443
Query: 276 PRVEILAR 283
+VE LAR
Sbjct: 444 KKVEKLAR 451
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 283 RKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFIS 339
+K +V L +A V ARGLD ++ V+N+D D + + H ++ K AF ++
Sbjct: 547 KKKDVSTL-VATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKGTAFTLVT 605
Query: 340 EENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
E++ +A LV+ E + V L A+ ++ K G+ GG L R
Sbjct: 606 EKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNIGGAGLGFRGR 665
>gi|350426308|ref|XP_003494399.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus impatiens]
Length = 774
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 131/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I Y+ KNFY EI +S +K L +K+ P P+ ++ G +++
Sbjct: 209 EIKYESFEKNFYNVHDEIANLSKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALIK 268
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A +SG D + I +TGSGKT AF+ PML HI +Q + G D
Sbjct: 269 AIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKAG-D 327
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------G 215
P+GL++APT EL + Q+ R+ G
Sbjct: 328 GPIGLILAPTRELSQQIYQEARKFGKVYNIQVCCCYGGGSKWEQSKALEGGAEIVVATPG 387
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMIDL+ +K TNLTRVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 388 RMIDLVK---MKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFK 444
Query: 276 PRVEILAR 283
RVE LAR
Sbjct: 445 KRVEKLAR 452
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I A K +A V ARGLD + V+N+D D + + H ++ K A+
Sbjct: 544 ITAFKKKEVTTLVATDVAARGLDIPHIRTVVNYDVARDIDTHTHRIGRTGRAGEKGTAYT 603
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNL 394
++E++ +A LV+ E + V L A+ ++ K G+ GG L
Sbjct: 604 LVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAGLGF 663
Query: 395 MKR 397
R
Sbjct: 664 RGR 666
>gi|66522071|ref|XP_624210.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Apis mellifera]
Length = 772
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 163/346 (47%), Gaps = 81/346 (23%)
Query: 15 EIDPLDAFM---------NDMECSFAEHPNNCFRL-GRRLPAEDSHSASDYELFMKR--- 61
E DPLDAFM N+ E AE + G R + Y +M+
Sbjct: 111 EEDPLDAFMAGIDAEVKKNNYEAQLAEDERKEEKSKGFRADIDGEDDEESYYRYMEENPT 170
Query: 62 AKKKKRDKNREI----------IKSKIKID-----------YQQLRKNFYTQAREITRMS 100
A ++ + ++EI I K +ID Y+ KNFY EI ++
Sbjct: 171 AGLQQEESDQEIEYDEDGNPIAIPKKKEIDPLPPIDHSEIQYESFEKNFYNVHDEIANLN 230
Query: 101 PA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALII 156
RK L +K+ P P+ ++ G +++ K + P IQA A +
Sbjct: 231 KQQVDDLRKTLGIKVSGPSPPNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAVPAAL 290
Query: 157 SGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVR 213
SG D + I +TGSGKT AF+ PML HI +Q + G D P+GL++APT EL + Q+ R
Sbjct: 291 SGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKEG-DGPIGLILAPTRELSQQIYQEAR 349
Query: 214 R------------------------------------GRMIDLLCKNGVKITNLTRVTYL 237
+ GR+IDL+ +K TNLTRVT+L
Sbjct: 350 KFGKVYNVQVCCCYGGGSKWEQSKALEGGAEIVVATPGRIIDLVK---MKATNLTRVTFL 406
Query: 238 VLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
VLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF RVE LAR
Sbjct: 407 VLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRVEKLAR 452
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I A K + +A V ARGLD + V+N+D D + + H ++ K A+
Sbjct: 544 ITAFKKKEVSTLVATDVAARGLDIPHIRTVLNYDVARDIDTHTHRIGRTGRAGEKGTAYT 603
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNL 394
++E++ +A LV+ E + V L A+ ++ K G+ GG L
Sbjct: 604 LVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAGLGF 663
Query: 395 MKR 397
R
Sbjct: 664 RGR 666
>gi|367007196|ref|XP_003688328.1| hypothetical protein TPHA_0N01130 [Tetrapisispora phaffii CBS 4417]
gi|357526636|emb|CCE65894.1| hypothetical protein TPHA_0N01130 [Tetrapisispora phaffii CBS 4417]
Length = 877
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 170/325 (52%), Gaps = 58/325 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS-------HSASDYELFMKRAKKKKR 67
++DPL++FMN + S +N G + D+ + + D + R KK +
Sbjct: 164 DVDPLESFMNSINTS---KNSNGTLTGSLIDDNDTLDNVLVENGSDDDNEALLRYKKVAK 220
Query: 68 DKNREIIKSK--IKIDYQQLRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPI 120
K +I++ K D K+FY + + MS +L ++KI K P+PI
Sbjct: 221 LKASKIVQHMNFKKEDLVPFPKSFYVEPEAVHEMSNEAVDELRLNLGNIKISGKNCPRPI 280
Query: 121 KTWRQTGLTTKILETFSK-LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM 179
W Q G+++ ++ +K L ++ P IQ+ A I++G D + I++TGSGKT+++ LP+
Sbjct: 281 TRWSQLGISSDVMYLLTKTLQYDTPTPIQSQAIPAIMTGRDVIGISKTGSGKTISYALPL 340
Query: 180 LRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR---------------------- 214
+RH+ Q P+ + P+GL++APT EL + +++++
Sbjct: 341 IRHVKAQRPLSNSETGPLGLIIAPTRELAIQINEEIQKFIKSDPSIRSICCTGGSELKNQ 400
Query: 215 ---------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
GR IDLL N K+ N R+T ++LDEADR+FDMGFEPQ+T+I++
Sbjct: 401 IYEFKRGIEIVVATPGRFIDLLTLNTGKLLNTKRITSVILDEADRLFDMGFEPQVTQIMK 460
Query: 260 NIRPDRQAVLFSPTFPPRVEILARK 284
IRPD+Q VLFS TFP +++ ++
Sbjct: 461 TIRPDKQCVLFSATFPIKLQAFVKR 485
>gi|401838933|gb|EJT42341.1| PRP5-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 659
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 181/353 (51%), Gaps = 62/353 (17%)
Query: 7 KQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS----HSASDYEL----- 57
+++P E DPLD FM ++ +G L +D A D +
Sbjct: 124 QKVPEYDDEKDPLDVFMTSLKTQEISSKTTSHNVGNILDVDDQMVELEGAEDENIGDTTD 183
Query: 58 ---FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQL-----DL 109
K AK K + + ++I S ++ ++ +KNFY ++ ++ M+ ++L ++
Sbjct: 184 NFNISKIAKLKAKKRVKQINYSPEEL--ERFQKNFYVESEAVSSMTDIEVEELRLSLDNI 241
Query: 110 KIREKCAPKPIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETG 168
I+ PKP+ W Q GL+T I+ + KL+ ++ IQ+ A I+SG D + I++TG
Sbjct: 242 NIKGTGCPKPVTKWSQLGLSTDIMTLITGKLHFDSLTPIQSQALPAIMSGRDVIGISKTG 301
Query: 169 SGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR----------- 214
SGKT+++LLP+LR + Q + + P+GL++APT EL + ++V +
Sbjct: 302 SGKTISYLLPLLRQVKAQRSLSKHETGPLGLILAPTRELALQIHEEVTKFTGTDASIRSV 361
Query: 215 --------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDM 248
GR ID+L N K+ + R+T++++DEADR+FD+
Sbjct: 362 CCTGGSEMKKQITDLKRGAEIVVATPGRFIDILTLNDGKLLSTKRITFVIMDEADRLFDL 421
Query: 249 GFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
GFEPQIT+I++ +RPD+Q VLFS TFP ++ A V I+ ++ ++GL
Sbjct: 422 GFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFA--VRVLRSPISITINSKGL 472
>gi|380022612|ref|XP_003695134.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX42-like [Apis florea]
Length = 772
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/346 (34%), Positives = 163/346 (47%), Gaps = 81/346 (23%)
Query: 15 EIDPLDAFM---------NDMECSFAEHPNNCFRL-GRRLPAEDSHSASDYELFMKR--- 61
E DPLDAFM N+ E AE + G R + Y +M+
Sbjct: 111 EEDPLDAFMAGIDAEVKKNNYEAQLAEDERKEEKSKGFRADIDGEDDEESYYRYMEENPT 170
Query: 62 AKKKKRDKNREI----------IKSKIKID-----------YQQLRKNFYTQAREITRMS 100
A ++ + ++EI I K +ID Y+ KNFY EI ++
Sbjct: 171 AGLQQEESDQEIEYDEDGNPIAIPKKKEIDPLPPIDHSEIQYESFEKNFYNVHDEIANLN 230
Query: 101 PA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALII 156
RK L +K+ P P+ ++ G +++ K + P IQA A +
Sbjct: 231 KQQVDDLRKTLGIKVSGPSPPNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAVPAAL 290
Query: 157 SGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVR 213
SG D + I +TGSGKT AF+ PML HI +Q + G D P+GL++APT EL + Q+ R
Sbjct: 291 SGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKEG-DGPIGLILAPTRELSQQIYQEAR 349
Query: 214 R------------------------------------GRMIDLLCKNGVKITNLTRVTYL 237
+ GR+IDL+ +K TNLTRVT+L
Sbjct: 350 KFGKVYNVQVCCCYGGGSKWEQXKALEGGAEIVVATPGRIIDLV---KMKATNLTRVTFL 406
Query: 238 VLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
VLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF RVE LAR
Sbjct: 407 VLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKKRVEKLAR 452
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I A K + +A V ARGLD + V+N+D D + + H ++ K A+
Sbjct: 544 ITAFKKKEVSTLVATDVAARGLDIPHIRTVLNYDVARDIDTHTHRIGRTGRAGEKGTAYT 603
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNL 394
++E++ +A LV+ E + V L A+ ++ K G+ GG L
Sbjct: 604 LVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAGLGF 663
Query: 395 MKR 397
R
Sbjct: 664 RGR 666
>gi|365761953|gb|EHN03573.1| Prp5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 706
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 179/353 (50%), Gaps = 62/353 (17%)
Query: 7 KQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSH------------SASD 54
+++P E DPLD FM ++ +G L +D +D
Sbjct: 124 QKVPEYDDEKDPLDVFMTSLKTQEISSKTTSHNVGNILDVDDQMVELEGAEDENIGDTTD 183
Query: 55 YELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQL-----DL 109
K AK K + + ++I S ++ + +KNFY ++ ++ M+ ++L ++
Sbjct: 184 NSNISKIAKLKAKKRVKQINYSPEEL--EPFQKNFYVESEAVSSMTDIEVEELRLSLDNI 241
Query: 110 KIREKCAPKPIKTWRQTGLTTKILETF-SKLNHENPVAIQAPASALIISGLDSVAITETG 168
I+ PKP+ W Q GL+T ++ SKL+ ++ IQ+ A I+SG D + I++TG
Sbjct: 242 NIKGTGCPKPVTKWSQLGLSTDVMTLITSKLHFDSLTPIQSQALPAIMSGRDVIGISKTG 301
Query: 169 SGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR----------- 214
SGKT+++LLP+LR + Q + + P+GL++APT EL + ++V +
Sbjct: 302 SGKTISYLLPLLRQVKAQRSLSKHETGPLGLILAPTRELALQIHEEVTKFTGTDASIRSV 361
Query: 215 --------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDM 248
GR ID+L N K+ + R+T++++DEADR+FD+
Sbjct: 362 CCTGGSEMKKQITDLKRGAEIVVATPGRFIDILTLNDGKLLSTKRITFVIMDEADRLFDL 421
Query: 249 GFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
GFEPQIT+I++ +RPD+Q VLFS TFP ++ A V I+ ++ ++GL
Sbjct: 422 GFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFA--VRVLRSPISITINSKGL 472
>gi|383857449|ref|XP_003704217.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Megachile
rotundata]
Length = 774
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 131/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I Y+ KNFY EI +S RK L +K+ P P+ ++ G +++
Sbjct: 209 EIQYESFEKNFYNVHDEIASLSKQQIDDLRKTLGIKVSGPSPPNPVTSFGHFGFDDALIK 268
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A +SG D + I +TGSGKT AF+ PML HI +Q + G D
Sbjct: 269 AIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKAG-D 327
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------G 215
P+GL++APT EL + Q+ R+ G
Sbjct: 328 GPIGLILAPTRELSQQIYQEARKFGKVYNIQVCCCYGGGSKWEQSKALEGGAEIVVATPG 387
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+IDL+ +K TNLTRVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 388 RIIDLV---KMKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFK 444
Query: 276 PRVEILAR 283
RVE LAR
Sbjct: 445 KRVEKLAR 452
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 5/123 (4%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I A K + +A V ARGLD + V+N+D D + + H ++ K A+
Sbjct: 544 ITAFKKKEVSTLVATDVAARGLDIPHIRTVVNYDIARDIDTHTHRIGRTGRAGEKGTAYT 603
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNL 394
++E++ +A LV+ E + V L A+ ++ K G+ GG L
Sbjct: 604 LVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAGLGF 663
Query: 395 MKR 397
R
Sbjct: 664 RGR 666
>gi|307204462|gb|EFN83169.1| ATP-dependent RNA helicase DDX42 [Harpegnathos saltator]
Length = 770
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 130/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
KIDY+ KNFY EI ++ RK L +K+ P P+ ++ G +++
Sbjct: 208 KIDYESFEKNFYNVHEEIANLNKQQVDNLRKTLGIKVSGPSPPNPVTSFGHFGFDDALMK 267
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K P IQA A ++G D + I +TGSGKT AF+ PML HI +Q + G D
Sbjct: 268 AIRKNEFTQPTPIQAQAVPAALNGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKAG-D 326
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------G 215
P+GL++APT EL + Q+ ++ G
Sbjct: 327 GPIGLILAPTRELSQQIYQEAKKFGKVYNIQVCCCYGGGSKWEQSKALESGAEIVVATPG 386
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMIDL+ +K TNL RVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 387 RMIDLV---KMKATNLIRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFK 443
Query: 276 PRVEILAR 283
RVE LAR
Sbjct: 444 KRVEKLAR 451
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Query: 283 RKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFIS 339
+K +V L +A V ARGLD ++ VIN+D D + + H ++ K A+ ++
Sbjct: 546 KKKDVSTL-VATDVAARGLDIPHIKTVINYDVARDIDTHTHRIGRTGRAGEKGTAYTLVT 604
Query: 340 EENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
E++ ++ LV+ E + V L A+ ++ K G+ GG L R
Sbjct: 605 EKDKEFSGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSINVGGAGLGFRGR 664
>gi|321476533|gb|EFX87493.1| hypothetical protein DAPPUDRAFT_306483 [Daphnia pulex]
Length = 805
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/321 (35%), Positives = 157/321 (48%), Gaps = 58/321 (18%)
Query: 80 IDYQQLRKNFYTQAREITRM----SPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I Y KNFY + EI + + R+ L LK+ PKP+ ++ K++
Sbjct: 255 ITYSPFEKNFYEEHEEIKNLPLNQANELRETLGLKVSGISIPKPVCSFAHFNFDEKLMNV 314
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K NP IQ+ A +SG D + I +TGSGKT AFL PM+ HI +QP + PG D
Sbjct: 315 IRKSEFTNPTPIQSQAIPAALSGRDVIGIAQTGSGKTAAFLWPMIVHILDQPDLKPG-DG 373
Query: 196 PVGLVMAPTGELVRQ---QVRR------------------------------------GR 216
P+GL++APT EL +Q + ++ GR
Sbjct: 374 PIGLILAPTRELSQQIYTEAKKFCKVFGISVVCCYGGGSKWEQSKDLEQGAEIVVATPGR 433
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MIDL+ +K TNL RVT+LVLDEADRMFDMGFEPQ+ I + RP+RQ +LFS TF
Sbjct: 434 MIDLVK---IKATNLQRVTFLVLDEADRMFDMGFEPQVRSICNHARPERQTLLFSATFKK 490
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSCAFR 336
R+E LAR +V + I G +++ VI AP SWL +
Sbjct: 491 RIEKLAR--DVLSDPIRIVQGDVGEANQDVTQVIEVIAPT--------AKYSWLITRLVE 540
Query: 337 FISEENA-IYATDLVKAFELS 356
F++ + I+ T A ELS
Sbjct: 541 FMASGSVLIFVTKKANAEELS 561
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 5/125 (4%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I + K ++ +A V ARGLD + V+N+D D + + H ++ K A+
Sbjct: 587 ISSFKKKEMDILVATDVAARGLDIPHIRTVVNYDIARDIDTHTHRIGRTGRAGEKGTAYT 646
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNL 394
++ + +A LV+ E + VV + L A+ ++ K GQ GG L
Sbjct: 647 LVTPADKEFAGHLVRNLEGASQVVSEPLMDLAMQSAWFRKSRFKGGQGRKPNVGGRGLGY 706
Query: 395 MKRRI 399
+ +
Sbjct: 707 SDKSL 711
>gi|340723638|ref|XP_003400196.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus
terrestris]
Length = 774
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 131/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I Y+ KNFY EI ++ +K L +K+ P P+ ++ G +++
Sbjct: 209 EIKYESFEKNFYNVHDEIANLNKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALIK 268
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A +SG D + I +TGSGKT AF+ PML HI +Q + GD
Sbjct: 269 AIRKNEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKAGD- 327
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------G 215
P+GL++APT EL + Q+ R+ G
Sbjct: 328 GPIGLILAPTRELSQQIYQEARKFGKVYNIQVCCCYGGGSKWEQSKALEGGAEIVVATPG 387
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMIDL+ +K TNLTRVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 388 RMIDLVK---MKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFK 444
Query: 276 PRVEILAR 283
RVE LAR
Sbjct: 445 KRVEKLAR 452
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 5/123 (4%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I A K +A V ARGLD + V+N+D D + + H ++ K A+
Sbjct: 544 ITAFKKKEVTTLVATDVAARGLDIPHIRTVVNYDVARDIDTHTHRIGRTGRAGEKGTAYT 603
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNL 394
++E++ +A LV+ E + V L A+ ++ K G+ GG L
Sbjct: 604 LVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAGLGF 663
Query: 395 MKR 397
R
Sbjct: 664 RGR 666
>gi|147859772|emb|CAN78903.1| hypothetical protein VITISV_026451 [Vitis vinifera]
Length = 692
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 171/398 (42%), Gaps = 118/398 (29%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY ++ + MS YR + ++ + PKPI+ +++ LE +KL
Sbjct: 256 FEKNFYIESPSVQAMSEQEAMLYRARREITVEGYDVPKPIRHFQEANFPGYCLEVIAKLG 315
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQA + + G D + I ETGSGKTLA+LLP L H+ QPP+V G + P+ LV
Sbjct: 316 FVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPPLVRG-EGPIVLV 374
Query: 201 MAPTGELVRQ---------------------------QVRR------------------- 214
+APT EL Q Q+R
Sbjct: 375 LAPTRELAVQIQEEALKFGSFTKIRSTCIYGGAPKGPQIRDLQRGWCTKILSIALMLGVE 434
Query: 215 ------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAV 268
GR+ID+L + TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +
Sbjct: 435 IVIATPGRLIDMLE---AQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTL 491
Query: 269 LFSPTFPPRVEILAR-------------KTNVCNLSIANSVRARGLDEKE---------L 306
+S T+P VE LAR + N SI V EK +
Sbjct: 492 YWSATWPREVETLARQFLRNPYKVIIGSQDLKANQSIQQVVEVVTETEKYNSNRRPSTVM 551
Query: 307 ELVI---------------------------------NFDAPNDYEDYVH---HCCQSWL 330
ELV+ N+D P+ EDYVH ++
Sbjct: 552 ELVVVAARLTHTSIFINFSDGFESDGDGDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGA 611
Query: 331 KSCAFRFISEENAIYATDLVKAFELSELVVRDDLKAVA 368
K A F + NA +A DL+K + + VV L A+A
Sbjct: 612 KGTAITFFTHSNAKFARDLIKILQEAGQVVSPALSAMA 649
>gi|194868558|ref|XP_001972305.1| GG13958 [Drosophila erecta]
gi|190654088|gb|EDV51331.1| GG13958 [Drosophila erecta]
Length = 786
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 159/325 (48%), Gaps = 63/325 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ KNFYTQ +I + R+ L +K+ PKP+ ++ G ++++
Sbjct: 221 EIEYEPFEKNFYTQHDDIAALDEEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIK 280
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A +SG D + I +TGSGKT AF+ PML H+ +Q + PG D
Sbjct: 281 AVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQRQLKPG-D 339
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 340 GPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPG 399
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVTYLVLDEADRMF MGFEPQ+ I ++RPDRQ ++FS TF
Sbjct: 400 RMIDMV---KMKATNLRRVTYLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFK 456
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVIN---FDAPNDYEDYVHHCCQSWLKS 332
R+E LAR +++ VR D E I + PN + + +WL
Sbjct: 457 KRIERLARDV------LSDPVRIVQGDLNEANQDITQSVYVFPNPLQKW------NWLLC 504
Query: 333 CAFRFISEENA-IYATDLVKAFELS 356
+F+SE + I+ T V A +S
Sbjct: 505 HLVKFLSEGSVLIFVTKKVDAETVS 529
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C++ +A V ARGLD ++ V+N+D D E + H ++ K AF +++
Sbjct: 559 KRKECDILVATDVAARGLDIPHIKNVVNYDTARDIETHTHRIGRTGRAGEKGNAFTLVTD 618
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
++ +A LV+ E ++ V DDL +A
Sbjct: 619 KDKEFAGHLVRNLEGADQQVPDDLMELA 646
>gi|225442260|ref|XP_002279117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Vitis vinifera]
gi|297743075|emb|CBI35942.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 135/256 (52%), Gaps = 49/256 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY ++ + MS YR++ ++ + + PKP+ +R GL +++ +K
Sbjct: 60 FEKNFYVESPAVAAMSEKEVEQYRERREITVEGRDVPKPVMNFRDVGLPEYVMQEITKAG 119
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQA + + G D + I ETGSGKTLA+LLP + H+ QP + PG D P+ LV
Sbjct: 120 FAEPTPIQAQGWPMALKGRDVIGIAETGSGKTLAYLLPAIIHVNAQPILAPG-DGPIVLV 178
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID+L
Sbjct: 179 LAPTRELAVQIQQEAAKFGASSRIKNTCIHGGVPKGPQIRDLQKGVEIVIATPGRLIDML 238
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S T+P VE L
Sbjct: 239 ESHH---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEQL 295
Query: 282 ARK--TNVCNLSIANS 295
ARK N C + I ++
Sbjct: 296 ARKFLYNPCKVVIGSA 311
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 392 KAGKSPIMTATDVAARGLDVKDVKFVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA 451
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A +L+ E + V +L A+
Sbjct: 452 ANARFAKELITILEEAGQRVAPELAAMG 479
>gi|325185113|emb|CCA19605.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 711
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 116/337 (34%), Positives = 168/337 (49%), Gaps = 72/337 (21%)
Query: 15 EIDPLDAFM----------NDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKK 64
E+DPLDAFM ++ E + + F+ RL D D + + A K
Sbjct: 48 EVDPLDAFMLGIDAQPVILDEEEKEHESYVVDAFQDRERLQYNDGKQEEDSDEEVYAAAK 107
Query: 65 KKRDKNR----EIIKSKI-----------KIDYQQLRKNFYTQAREITRMSP----AYRK 105
K+ +I S++ KI+Y+ +KNFY A EI M+ R
Sbjct: 108 AIDSKSSAFEDDISNSRLQMEVLQALDHTKIEYEAFQKNFYIPAAEIASMTTDQVKTLRN 167
Query: 106 QLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAIT 165
+L L++ P PI+++ Q L KIL KL E P AIQA + +SG D + I
Sbjct: 168 ELQLQVEGDEIPHPIQSFMQLQLDRKILNLLMKLGLEAPTAIQAQTFPVALSGRDMIGIA 227
Query: 166 ETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---QVRR-------- 214
+TGSGKTLAF +PM+ H+ +Q + G + P+ +V++PT EL Q QV+
Sbjct: 228 KTGSGKTLAFTIPMIWHVMDQRELSKG-EGPIAIVISPTRELAHQIYTQVKMFTKLYGAE 286
Query: 215 ----------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246
GR+I+L+ K +K TN RVT++VLDEADRMF
Sbjct: 287 CVAVYGGVGKWEQVQALRKGAEVLIATPGRLIELIRKKTIK-TN--RVTFVVLDEADRMF 343
Query: 247 DMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
++GFE Q+ ++ +RPDRQ++LFS TF PR+E LAR
Sbjct: 344 ELGFESQLRSMLGQLRPDRQSLLFSATFRPRIEQLAR 380
>gi|321260432|ref|XP_003194936.1| ATP-dependent RNA helicase DBP2 (p68-like protein) [Cryptococcus
gattii WM276]
gi|317461408|gb|ADV23149.1| ATP-dependent RNA helicase DBP2 (p68-like protein), putative
[Cryptococcus gattii WM276]
Length = 537
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 134/251 (53%), Gaps = 52/251 (20%)
Query: 80 IDYQ-----QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
ID+Q + KNFY Q +T S A+R + ++KI+ K P+PI T+ + G
Sbjct: 59 IDWQNQSLAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPD 118
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
I+ ++ P +IQ A + +SG D VAI ETGSGKT++F LP + HI QP +
Sbjct: 119 YIMSEIRRMGFTAPSSIQCQAWPMALSGRDVVAIAETGSGKTISFCLPAMVHINAQPLLA 178
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ L++APT EL Q Q+R
Sbjct: 179 PG-DGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICV 237
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS
Sbjct: 238 ATPGRLIDMLETGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFS 294
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 295 ATWPKEVQRLA 305
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + +A V +RGLD +++ VIN+D PN+ EDY+H ++ K ++ + +
Sbjct: 402 KSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTM 461
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+N+ A +LV+ S+ + +L+ +A
Sbjct: 462 DNSKSARELVQILRESKADIPPELEEMA 489
>gi|134113286|ref|XP_774667.1| hypothetical protein CNBF3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257311|gb|EAL20020.1| hypothetical protein CNBF3470 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 559
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 134/251 (53%), Gaps = 52/251 (20%)
Query: 80 IDYQ-----QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
ID+Q + KNFY Q +T S A+R + ++KI+ K P+PI T+ + G
Sbjct: 79 IDWQNQSLAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPD 138
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
I+ ++ P +IQ A + +SG D VAI ETGSGKT++F LP + HI QP +
Sbjct: 139 YIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLA 198
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ L++APT EL Q Q+R
Sbjct: 199 PG-DGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICV 257
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS
Sbjct: 258 ATPGRLIDMLETGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFS 314
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 315 ATWPKEVQRLA 325
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + +A V +RGLD +++ VIN+D PN+ EDY+H ++ K ++ + +
Sbjct: 422 KSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTM 481
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+N+ A +LV+ S+ + +L+ +A
Sbjct: 482 DNSKAARELVQILRESKADIPPELEEMA 509
>gi|134113284|ref|XP_774668.1| hypothetical protein CNBF3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257312|gb|EAL20021.1| hypothetical protein CNBF3470 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 546
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 134/251 (53%), Gaps = 52/251 (20%)
Query: 80 IDYQ-----QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
ID+Q + KNFY Q +T S A+R + ++KI+ K P+PI T+ + G
Sbjct: 66 IDWQNQSLAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPD 125
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
I+ ++ P +IQ A + +SG D VAI ETGSGKT++F LP + HI QP +
Sbjct: 126 YIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLA 185
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ L++APT EL Q Q+R
Sbjct: 186 PG-DGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICV 244
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS
Sbjct: 245 ATPGRLIDMLETGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFS 301
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 302 ATWPKEVQRLA 312
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + +A V +RGLD +++ VIN+D PN+ EDY+H ++ K ++ + +
Sbjct: 409 KSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTM 468
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+N+ A +LV+ S+ + +L+ +A
Sbjct: 469 DNSKAARELVQILRESKADIPPELEEMA 496
>gi|302308420|ref|NP_985329.2| AFL221Cp [Ashbya gossypii ATCC 10895]
gi|442570093|sp|Q755N4.2|DBP2_ASHGO RecName: Full=ATP-dependent RNA helicase DBP2
gi|299790624|gb|AAS53153.2| AFL221Cp [Ashbya gossypii ATCC 10895]
gi|374108557|gb|AEY97463.1| FAFL221Cp [Ashbya gossypii FDAG1]
Length = 557
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 147/280 (52%), Gaps = 58/280 (20%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++ +MS +RK+ ++KI PKPI+T+ + G +L+ +
Sbjct: 73 KFEKNFYVEHEDVQKMSTDEVEQFRKENEMKIVGHDVPKPIRTFDEAGFPEYVLKEVKEE 132
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ + +SG D + + TGSGKTL++ LP + HI QP + PG D PV L
Sbjct: 133 GFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPVVL 191
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR+ID+
Sbjct: 192 VLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDM 251
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 252 L---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQ 308
Query: 281 LAR-------KTNVCNLSIANSVRARGLDEKELELVINFD 313
LAR + N+ +L +A S L +E+V +FD
Sbjct: 309 LARDYLHDPIQVNIGSLELAASHTITQL----VEVVSDFD 344
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V ARG+D K + VIN+D P + EDYVH ++ A F +E
Sbjct: 408 RTGRSPIMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTE 467
Query: 341 ENAIYATDLVKAFELSELVVRDDL 364
N L+ ++ + DL
Sbjct: 468 ANKTLGAQLISIMREAKQEIPQDL 491
>gi|405121399|gb|AFR96168.1| ATP-dependent RNA helicase DBP2-A [Cryptococcus neoformans var.
grubii H99]
Length = 450
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 134/251 (53%), Gaps = 52/251 (20%)
Query: 80 IDYQ-----QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
ID+Q + KNFY Q +T S A+R + ++KI+ K P+PI T+ + G
Sbjct: 58 IDWQNQSLAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPD 117
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
I+ ++ P +IQ A + +SG D VAI ETGSGKT++F LP + HI QP +
Sbjct: 118 YIMSEIRRMGFTAPSSIQCQAWPMALSGRDVVAIAETGSGKTISFCLPAMVHINAQPLLA 177
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ L++APT EL Q Q+R
Sbjct: 178 PG-DGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICV 236
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS
Sbjct: 237 ATPGRLIDMLETGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFS 293
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 294 ATWPKEVQRLA 304
>gi|58268226|ref|XP_571269.1| p68-like protein [Cryptococcus neoformans var. neoformans JEC21]
gi|338818050|sp|P0CQ77.1|DBP2_CRYNB RecName: Full=ATP-dependent RNA helicase DBP2-A
gi|338818051|sp|P0CQ76.1|DBP2_CRYNJ RecName: Full=ATP-dependent RNA helicase DBP2-A
gi|57227504|gb|AAW43962.1| p68-like protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 540
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 134/251 (53%), Gaps = 52/251 (20%)
Query: 80 IDYQ-----QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
ID+Q + KNFY Q +T S A+R + ++KI+ K P+PI T+ + G
Sbjct: 60 IDWQNQSLAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPD 119
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
I+ ++ P +IQ A + +SG D VAI ETGSGKT++F LP + HI QP +
Sbjct: 120 YIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLA 179
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ L++APT EL Q Q+R
Sbjct: 180 PG-DGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICV 238
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS
Sbjct: 239 ATPGRLIDMLETGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFS 295
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 296 ATWPKEVQRLA 306
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + +A V +RGLD +++ VIN+D PN+ EDY+H ++ K ++ + +
Sbjct: 403 KSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTM 462
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+N+ A +LV+ S+ + +L+ +A
Sbjct: 463 DNSKAARELVQILRESKADIPPELEEMA 490
>gi|58268224|ref|XP_571268.1| p68-like protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57227503|gb|AAW43961.1| p68-like protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 527
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 134/251 (53%), Gaps = 52/251 (20%)
Query: 80 IDYQ-----QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
ID+Q + KNFY Q +T S A+R + ++KI+ K P+PI T+ + G
Sbjct: 47 IDWQNQSLAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPD 106
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
I+ ++ P +IQ A + +SG D VAI ETGSGKT++F LP + HI QP +
Sbjct: 107 YIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLA 166
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ L++APT EL Q Q+R
Sbjct: 167 PG-DGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICV 225
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS
Sbjct: 226 ATPGRLIDMLETGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFS 282
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 283 ATWPKEVQRLA 293
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + +A V +RGLD +++ VIN+D PN+ EDY+H ++ K ++ + +
Sbjct: 390 KSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTM 449
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+N+ A +LV+ S+ + +L+ +A
Sbjct: 450 DNSKAARELVQILRESKADIPPELEEMA 477
>gi|356526023|ref|XP_003531619.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine
max]
Length = 507
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 130/244 (53%), Gaps = 47/244 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY ++ + M+ A YR+Q ++ + + PKP+KT+ G +L+ +K
Sbjct: 60 HFEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKTFHDAGFPEYVLQEITKA 119
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PG D P+ L
Sbjct: 120 GFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILNPG-DGPIVL 178
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q QVR GR+ID+
Sbjct: 179 VLAPTRELAVQIQQETTKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 238
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N TNL RVTYLVLDEADRM DMGF+PQ+ +IV IRPDRQ + +S T+P VE
Sbjct: 239 LESNH---TNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQ 295
Query: 281 LARK 284
LARK
Sbjct: 296 LARK 299
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ V+N+D P EDYVH ++ K A+ + +
Sbjct: 393 KSGKSPIMTATDVAARGLDVKDVKYVVNYDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTA 452
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A +L+ E + V +L A+
Sbjct: 453 ANARFAKELIAILEEAGQKVSPELAAMG 480
>gi|393241453|gb|EJD48975.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 531
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 132/243 (54%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + + +T R + YR++ +K++ + P+P+ T+ + G IL T
Sbjct: 62 KFEKNFYNEDKRVTARSERETEEYRQKHQMKVQGRNVPRPVTTFEEAGFPEYILGTIRAQ 121
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ A + +SG D VAI +TGSGKT++F LP + HI QP + PG D P+ L
Sbjct: 122 GFSAPTAIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAPG-DGPIAL 180
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 181 VLAPTRELAVQIQTECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLIDM 240
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL R+TYLVLDEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 241 LES---QKTNLRRITYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQK 297
Query: 281 LAR 283
LA+
Sbjct: 298 LAQ 300
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ +K A+ + + +N+ A +
Sbjct: 404 IATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTAYTYFTTDNSKAARE 463
Query: 349 LV 350
L+
Sbjct: 464 LL 465
>gi|195326619|ref|XP_002030023.1| GM24798 [Drosophila sechellia]
gi|194118966|gb|EDW41009.1| GM24798 [Drosophila sechellia]
Length = 786
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 159/325 (48%), Gaps = 63/325 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ KNFYTQ +I + R+ L +K+ PKP+ ++ G ++++
Sbjct: 220 EIEYEPFEKNFYTQHDDIAALDEEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIK 279
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A +SG D + I +TGSGKT AF+ PML H+ +Q + PG D
Sbjct: 280 AVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPG-D 338
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 339 GPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPG 398
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ ++FS TF
Sbjct: 399 RMIDMV---KMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFK 455
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVIN---FDAPNDYEDYVHHCCQSWLKS 332
R+E LAR +++ VR D E I + PN + + +WL
Sbjct: 456 KRIERLARDV------LSDPVRIVQGDLNEANQDITQSVYVFPNPLQKW------NWLLC 503
Query: 333 CAFRFISEENA-IYATDLVKAFELS 356
+F+SE + I+ T V A +S
Sbjct: 504 HLVKFLSEGSVLIFVTKKVDAETVS 528
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C++ +A V ARGLD + V+N+D D E + H ++ K AF +++
Sbjct: 558 KRKECDILVATDVAARGLDIPHIRNVVNYDTARDIETHTHRIGRTGRAGEKGNAFTLVTD 617
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
++ +A LV+ E ++ VV DDL +A
Sbjct: 618 KDKEFAGHLVRNLEGADQVVPDDLMELA 645
>gi|24662330|ref|NP_648413.1| CG6418 [Drosophila melanogaster]
gi|7294797|gb|AAF50131.1| CG6418 [Drosophila melanogaster]
gi|16769458|gb|AAL28948.1| LD32732p [Drosophila melanogaster]
gi|220946788|gb|ACL85937.1| CG6418-PB [synthetic construct]
Length = 791
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 159/325 (48%), Gaps = 63/325 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ KNFYTQ +I + R+ L +K+ PKP+ ++ G ++++
Sbjct: 223 EIEYEPFEKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIK 282
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A +SG D + I +TGSGKT AF+ PML H+ +Q + PG D
Sbjct: 283 AVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPG-D 341
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 342 GPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPG 401
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ ++FS TF
Sbjct: 402 RMIDMV---KMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFK 458
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVIN---FDAPNDYEDYVHHCCQSWLKS 332
R+E LAR +++ VR D E I + PN + + +WL
Sbjct: 459 KRIERLARDV------LSDPVRIVQGDLNEANQDITQSVYVFPNPLQKW------NWLLC 506
Query: 333 CAFRFISEENA-IYATDLVKAFELS 356
+F+SE + I+ T V A +S
Sbjct: 507 HLVKFLSEGSVLIFVTKKVDAETVS 531
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I K C++ +A V ARGLD + V+N+D D E + H ++ K A+
Sbjct: 557 ITQFKRKECDILVATDVAARGLDIPHIRNVVNYDTARDIETHTHRIGRTGRAGEKGNAYT 616
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+++++ +A LV+ E ++ +V DDL +A
Sbjct: 617 LVTDKDKEFAGHLVRNLEGADQLVPDDLMELA 648
>gi|195552710|ref|XP_002076525.1| GD17585 [Drosophila simulans]
gi|194202136|gb|EDX15712.1| GD17585 [Drosophila simulans]
Length = 786
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 159/325 (48%), Gaps = 63/325 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ KNFYTQ +I + R+ L +K+ PKP+ ++ G ++++
Sbjct: 220 EIEYEPFEKNFYTQHDDIAALDEEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIK 279
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A +SG D + I +TGSGKT AF+ PML H+ +Q + PG D
Sbjct: 280 AVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPG-D 338
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 339 GPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPG 398
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ ++FS TF
Sbjct: 399 RMIDMV---KMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFK 455
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVIN---FDAPNDYEDYVHHCCQSWLKS 332
R+E LAR +++ VR D E I + PN + + +WL
Sbjct: 456 KRIERLARDV------LSDPVRIVQGDLNEANQDITQSVYVFPNPLQKW------NWLLC 503
Query: 333 CAFRFISEENA-IYATDLVKAFELS 356
+F+SE + I+ T V A +S
Sbjct: 504 HLVKFLSEGSVLIFVTKKVDAETVS 528
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I K C++ +A V ARGLD + V+N+D D E + H ++ K AF
Sbjct: 554 ITQFKRKECDILVATDVAARGLDIPHIRNVVNYDTARDIETHTHRIGRTGRAGEKGNAFT 613
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+++++ +A LV+ E ++ +V DDL +A
Sbjct: 614 LVTDKDKEFAGHLVRNLEGADQLVPDDLMELA 645
>gi|388580956|gb|EIM21267.1| p68 RNA helicase [Wallemia sebi CBS 633.66]
Length = 546
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 146/276 (52%), Gaps = 50/276 (18%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + + + S +RK+ D+ I PKPI + + G IL K+
Sbjct: 80 KFEKNFYVEDKRVQGRSDQEVTEFRKKHDMSIVGTGVPKPITAFDEAGFPNYILNEIKKM 139
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+P +IQ A + +SG D VAI +TGSGKT++F LP + HI QP + PG D P+ L
Sbjct: 140 GFPSPTSIQCQAWPMALSGRDMVAIAQTGSGKTISFALPAMVHINAQPLLSPG-DGPIAL 198
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 199 ILAPTRELAVQIQEECTKFGKSSRIRNTCVYGGVPKGPQIRDLVRGAEIVIATPGRLIDM 258
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLV+DEADRM DMGFEPQI +IV+ IRPDRQ ++FS T+P V+
Sbjct: 259 L---NMGKTNLKRVTYLVMDEADRMLDMGFEPQIRKIVEQIRPDRQTLMFSATWPKEVKA 315
Query: 281 LARK--TNVCNLSIANSVRARGLDEKE-LELVINFD 313
LA TN+ ++I + + + K+ +E+ +FD
Sbjct: 316 LAHDFLTNMIQVNIGSLELSANHNVKQIIEVCSDFD 351
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + +A V +RGLD K++ VIN+D ++ EDY+H ++ K + F +
Sbjct: 414 KSGRSPIMLATDVASRGLDVKDIGYVINYDFSSNVEDYIHRIGRTGRAGTKGTSITFFTT 473
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
ENA + DLVK + V +L+ +A
Sbjct: 474 ENAKSSRDLVKILREANQNVPPELEEMA 501
>gi|324504040|gb|ADY41744.1| ATP-dependent RNA helicase DDX42 [Ascaris suum]
Length = 808
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 133/247 (53%), Gaps = 47/247 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+YQ KNFY + +I MS R +L+LK+ PKP+ ++ G ++ T
Sbjct: 228 INYQPFNKNFYHEHEQIAAMSALKVFELRNRLNLKVAGFNPPKPVSSFAHFGFDEALMNT 287
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E+P AIQA + +SG D + I +TGSGKT+A+L P + HI +QP + G D
Sbjct: 288 IRKSEYEHPTAIQAQSVPAALSGRDVLGIAKTGSGKTVAYLWPAIVHIMDQPQLKEG-DG 346
Query: 196 PVGLVMAPTGEL---VRQQVRR------------------------------------GR 216
P+ L++ PT EL V Q+ +R GR
Sbjct: 347 PIALIVVPTRELAIQVYQEAKRFCKVYNIAVVCAYGGGSKWEQQNALKEGAELVVATPGR 406
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDL+ ++ TN TRVT+LV DEADRMFDMGFE Q+ I +IRPDRQ ++FS TF
Sbjct: 407 IIDLV---KIEATNFTRVTFLVFDEADRMFDMGFEAQVKSISDHIRPDRQCLMFSATFKA 463
Query: 277 RVEILAR 283
+VE LAR
Sbjct: 464 KVERLAR 470
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYA 346
L +A V ARGLD E+ VINFD D + +VH ++ K A+ +++ + A
Sbjct: 570 LMVATDVAARGLDIPEIRTVINFDLARDIDTHVHRIGRTGRAGEKGYAYTLLTDADKEMA 629
Query: 347 TDLVKAFELSELVVRDDLKAVA 368
LV+ E V D L +A
Sbjct: 630 GHLVRNLESVNQTVPDALLQLA 651
>gi|357613478|gb|EHJ68531.1| hypothetical protein KGM_00706 [Danaus plexippus]
Length = 757
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 132/248 (53%), Gaps = 48/248 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I Y+ KNFYT +I ++ +K L +KI PKP+ ++ G ++++
Sbjct: 213 EIQYEPFEKNFYTPHEDIEKLEQHQVEELKKNLGVKISGPDPPKPVSSFGHLGFDEQLMK 272
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P +QA +SG D + I TGSGKT AFL P+L HI +Q + PGD
Sbjct: 273 AIRKSEYTQPTPVQAAGIPAALSGRDLIGIARTGSGKTAAFLWPLLVHIMDQKELAPGD- 331
Query: 195 SPVGLVMAPT--GELVRQQVRR------------------------------------GR 216
P+GL++APT ++ + ++ GR
Sbjct: 332 GPIGLILAPTSLNRVIYMEAKKFGKVYNIRCVCCYGGGSKWEQSKALEGGAEIVVGTPGR 391
Query: 217 MIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
+IDL+ CK TNL RVTYLVLDEADRMFDMGFEPQ+ I ++RP+RQA+LFS TFP
Sbjct: 392 VIDLVKCK----ATNLQRVTYLVLDEADRMFDMGFEPQVRSICSHVRPERQALLFSATFP 447
Query: 276 PRVEILAR 283
RVE LAR
Sbjct: 448 RRVERLAR 455
>gi|356522500|ref|XP_003529884.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine
max]
Length = 507
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/244 (39%), Positives = 130/244 (53%), Gaps = 47/244 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY ++ + M+ A YR+Q ++ + + PKP+K++ G ++E +K
Sbjct: 60 HFEKNFYVESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKSFHDAGFPEYVMEEITKA 119
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PG D P+ L
Sbjct: 120 GFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPSIVHVNAQPILNPG-DGPIVL 178
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q QVR GR+ID+
Sbjct: 179 VLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 238
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N TNL RVTYLVLDEADRM DMGF+PQ+ +IV IRPDRQ + +S T+P VE
Sbjct: 239 LESNH---TNLQRVTYLVLDEADRMLDMGFDPQLRKIVSQIRPDRQTLYWSATWPKEVEQ 295
Query: 281 LARK 284
LARK
Sbjct: 296 LARK 299
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ + +
Sbjct: 393 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTYFTA 452
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A +L+ E + V +L A+
Sbjct: 453 ANARFAKELIAILEEAGQKVSPELAAMG 480
>gi|242019547|ref|XP_002430222.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212515318|gb|EEB17484.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 763
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 97/247 (39%), Positives = 128/247 (51%), Gaps = 47/247 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+YQ KNFY ++ +S + RK L +K+ P P+ + G +++
Sbjct: 224 IEYQDFEKNFYVVHDDVANLSKSKVEELRKTLGIKVTGPQPPHPVVGFAYFGFDEALMKV 283
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K + P IQA A +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 284 IRKSEYTTPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFVWPMLIHIMDQKELKPG-DG 342
Query: 196 PVGLVMAPTGELVRQQVRR---------------------------------------GR 216
P+GL++APT EL +Q GR
Sbjct: 343 PIGLILAPTRELSQQIYSEAKKFGKVYNIQVICCYGGGSKWEQSKALENGAEIVVATPGR 402
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MIDL+ +K TNL RVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 403 MIDLI---KMKATNLKRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKK 459
Query: 277 RVEILAR 283
+VE LAR
Sbjct: 460 KVERLAR 466
>gi|402224487|gb|EJU04549.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 486
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/246 (39%), Positives = 132/246 (53%), Gaps = 47/246 (19%)
Query: 81 DYQQLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETF 136
+ ++ KNFY + + ++ R +R++ ++KI+ + PKPI T+ + G IL T
Sbjct: 17 NLEKFEKNFYVEDKRVSARTDREVEDFRRKHEMKIQGRGVPKPITTFEEAGFPDYILTTI 76
Query: 137 SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSP 196
P IQ A + +SG D VAI +TGSGKT+AF LP + HI QP + PG D P
Sbjct: 77 KAQGFAAPTPIQCQAWPMALSGRDVVAIAQTGSGKTIAFALPAMLHINAQPLLTPG-DGP 135
Query: 197 VGLVMAPTGELV---------------------------RQQVRR------------GRM 217
+ LV+APT EL QQ+R GR+
Sbjct: 136 IALVLAPTRELAVQIQQECTKFGSNSRIRNTAVYGGAPKGQQIRDLQRGVEVVIATPGRL 195
Query: 218 IDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPR 277
ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P
Sbjct: 196 IDMLESGK---TNLRRVTYLVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKE 252
Query: 278 VEILAR 283
V+ LA+
Sbjct: 253 VQRLAQ 258
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ ++ + + +NA A +
Sbjct: 362 IATDVASRGLDVKDVGYVINYDFPNNIEDYIHRIGRTGRAGNTGVSYTYFTTDNAKQARE 421
Query: 349 LVKAFELSELVV 360
L+K +++ V
Sbjct: 422 LIKILRDAQMNV 433
>gi|157117281|ref|XP_001653010.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108883352|gb|EAT47577.1| AAEL001317-PA [Aedes aegypti]
Length = 799
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 133/248 (53%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY + KNFY +I +S + R +L +K+ P P+ ++ G ++++
Sbjct: 233 EIDYDKFEKNFYNPHEDIVGLSLSKINELRNKLGVKVSGPAPPAPVTSFAHFGFDEQLMK 292
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA +SG D + I +TGSGKT AFL PML HI +Q + PG D
Sbjct: 293 AIRKSEYTQPTPIQAQGVPAALSGRDIIGIAKTGSGKTAAFLWPMLVHIMDQKELGPG-D 351
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------G 215
P+GL++APT EL + Q+ ++ G
Sbjct: 352 GPIGLILAPTRELSLQIYQEAKKFGKIYNISVCCCYGGGSKWEQSKALEQGAEIVVATPG 411
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVTYLVLDEAD+MF++GFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 412 RMIDMVK---MKATNLQRVTYLVLDEADKMFNLGFEPQVRSICNHVRPDRQTMLFSATFK 468
Query: 276 PRVEILAR 283
R+E LAR
Sbjct: 469 KRIERLAR 476
>gi|390354880|ref|XP_003728430.1| PREDICTED: ATP-dependent RNA helicase DDX42-like
[Strongylocentrotus purpuratus]
Length = 892
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 164/334 (49%), Gaps = 59/334 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
+DY+ KNFY + I ++ + R++L++K+ PKP+ ++ G +++
Sbjct: 108 VDYEPFNKNFYNEHESIQTLNYSVVLDLRQKLNIKVSGADPPKPVTSFAHFGFDEQLMHC 167
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K + +P IQA + + G D + I +TGSGKT AF+ PML HI +Q + G D
Sbjct: 168 IRKSDFSSPTPIQAQGVPIAMCGRDVIGIAKTGSGKTAAFVWPMLVHIMDQRAIKKG-DG 226
Query: 196 PVGLVMAPTGELVRQ---QVRR------------------------------------GR 216
P+GL+ APT EL +Q +V++ GR
Sbjct: 227 PIGLICAPTRELAQQIYMEVKKFGKAYNIHVVCAYGGGNMHEQQRACEEGPEVIVATPGR 286
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDL+ K K TNL RV+YL+ DEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 287 LIDLVKK---KATNLRRVSYLIFDEADRMFDMGFEPQVRSIADHVRPDRQTLLFSATFRK 343
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQ-SWLKSCAF 335
+VE LAR + + +R D E N D E + + WL +
Sbjct: 344 KVERLARDI------LTDPIRVIQGDIGE----ANQDVTQVVEIFSDQTRKFPWLLARLV 393
Query: 336 RFISEENA-IYATDLVKAFELSELVVRDDLKAVA 368
RF +E + I+ T + A EL+ + R D V
Sbjct: 394 RFTTEGSVLIFVTKKINAEELATSLKRKDHPYVG 427
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 5/123 (4%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I A K + +A V ARGLD ++ V+N+D D + + H ++ K A+
Sbjct: 442 ITAFKRRAIPILVATDVAARGLDIPSIKNVVNYDVARDIDTHTHRIGRTGRAGEKGTAYT 501
Query: 337 FISEENAIYATDLVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNL 394
I +++ +A DLV+ E ++ V L A+ + + K G+ GG L
Sbjct: 502 LILKKDNQFAGDLVRNLEGADQAVPKSLLDLAMQNQYFKKSRYRAGKGKRLNIGGGGLGY 561
Query: 395 MKR 397
+R
Sbjct: 562 RER 564
>gi|198432373|ref|XP_002121386.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 42
[Ciona intestinalis]
Length = 727
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 131/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EI ++ + R++L +K+ PKP+ ++ G KI+
Sbjct: 197 EIDYPPFEKNFYREHDEIKSLTNDGVDSLRRRLGIKVSGFFPPKPVSSFGHFGFDEKIIS 256
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K N P IQA +SG D + I +TGSGKT AF+ PML HI +QP + G D
Sbjct: 257 AIRKHNFTQPTPIQAQGIPCGMSGRDVIGIAKTGSGKTAAFIWPMLVHIMDQPELKKG-D 315
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
PVGL++APT EL +Q + +R G
Sbjct: 316 GPVGLIVAPTRELCQQIYFECKRFGKVYGLRSVCCYGGGNMHEQQKGLSDGCEIVVATPG 375
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RVTYLV DEADRMF+MGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 376 RIIDHVKK---KNTNLLRVTYLVFDEADRMFEMGFEYQVRSIANHVRPDRQTLLFSATFR 432
Query: 276 PRVEILAR 283
R+E LAR
Sbjct: 433 KRIERLAR 440
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 283 RKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFIS 339
+K V L +A V ARGLD + VIN+D D + + H ++ K A+ ++
Sbjct: 535 KKKQVATL-VATDVAARGLDIPLIRNVINYDVARDIDTHTHRIGRTGRAGQKGTAYTLVT 593
Query: 340 EENAIYATDLVKAFELSELVVRDDLKAVA 368
++ ++ DLV+ E + V DDL +A
Sbjct: 594 SKDTYFSGDLVRNLEGAGQRVPDDLLQLA 622
>gi|167394408|ref|XP_001733535.1| pre-mRNA-processing ATP-dependent RNA helicase prp11 [Entamoeba
dispar SAW760]
gi|165894690|gb|EDR22596.1| pre-mRNA-processing ATP-dependent RNA helicase prp11, putative
[Entamoeba dispar SAW760]
Length = 636
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 118/207 (57%), Gaps = 40/207 (19%)
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKPIKTW + G+ ++ L +E P +Q A +I+SG D++ +TGSGKTLA+
Sbjct: 50 PKPIKTWSECGINPITMDVIKALKYEKPSPVQRQAIPVIMSGYDAIVCAKTGSGKTLAYT 109
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+P+++H+ Q P+ G+ P+G+V AP EL Q
Sbjct: 110 IPLIKHVMAQRPLSKGE-GPIGIVFAPIRELAEQINTEINKFGKYLNIRSVAVFGGTGIS 168
Query: 211 ----QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++RG RMID+L N +ITNL RVT++VLDEADRMFDMGF PQI RI
Sbjct: 169 NQIGALKRGTEIVVCTPGRMIDILVTNNGRITNLRRVTFVVLDEADRMFDMGFGPQIKRI 228
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
++ IRPD+Q V+FS TFP VE AR+
Sbjct: 229 IEGIRPDKQIVMFSATFPISVEQHARE 255
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 5/102 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
I S+ ARGLD K LELVIN+D PN EDYVH ++ + A FI++E Y+ D
Sbjct: 358 ITTSLCARGLDIKGLELVINYDCPNHLEDYVHRVGRTGRAGKRGKAITFITKEEEKYSED 417
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHG-TGHGG 389
+VKA LS + +L + + + K L L G G+GG
Sbjct: 418 IVKALTLSGGNISKELNDMYEEWKTK-KLFLETKEGKKGYGG 458
>gi|158284342|ref|XP_306246.4| Anopheles gambiae str. PEST AGAP012523-PA [Anopheles gambiae str.
PEST]
gi|157021090|gb|EAA02455.4| AGAP012523-PA [Anopheles gambiae str. PEST]
Length = 720
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/248 (39%), Positives = 128/248 (51%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY + KNFY +I +S A R L +K+ P P+ ++ G +++
Sbjct: 157 EIDYLKFEKNFYIPHEDIVNLSQAKVQDLRLTLGVKVSGPMPPHPVTSFAHFGFDESLMK 216
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+ K P IQA A +SG D + I +TGSGKT AFL PML HI +Q + PG D
Sbjct: 217 SIRKSEFSTPTPIQAQAIPAALSGRDIIGIAKTGSGKTAAFLWPMLVHIMDQRELGPG-D 275
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 276 GPIGLILAPTRELSLQIYNEAKKFGKVYNISICCCYGGGSKWEQSKALEQGAEIVVATPG 335
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVTYLVLDEAD+MF+MGFEPQ+ I +IRPDRQ +LFS TF
Sbjct: 336 RMIDMV---KIKATNLQRVTYLVLDEADKMFNMGFEPQVRSICNHIRPDRQTLLFSATFK 392
Query: 276 PRVEILAR 283
RVE LAR
Sbjct: 393 KRVEKLAR 400
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAI 344
++ +A V ARGLD + V+N+D D + + H ++ K A+ I++++
Sbjct: 499 VDIMVATDVAARGLDIPHIRTVVNYDIARDIDTHTHRIGRTGRAGEKGTAYTLITDKDKE 558
Query: 345 YATDLVKAFELSELVVRDDLKAVA-------DSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
++ LV+ E + V +DL +A +S N G GG L +R
Sbjct: 559 FSGHLVRNLEGANQDVPEDLMKLAMQSSWFRNSRFKHANKG----KNLNVGGAGLGFRQR 614
Query: 398 RIRRGKQLRKAQA 410
I+RG R A
Sbjct: 615 AIQRGPMGRSLDA 627
>gi|222624792|gb|EEE58924.1| hypothetical protein OsJ_10575 [Oryza sativa Japonica Group]
Length = 696
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 149/283 (52%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y+ K+FY + ++ MS Y K L +++ P+PIK++ G +++
Sbjct: 100 IEYEPFNKDFYEEKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNA 159
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K +E P IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 160 IAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEG 218
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G+V APT EL Q Q + GR
Sbjct: 219 PIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGR 278
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDLL +K + R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P
Sbjct: 279 LIDLLKMKALK---MFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPY 335
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + I +V G ++++ V+N P+D E
Sbjct: 336 KVERLARE--ILTDPIRVTVGQVGSANEDIKQVVNV-LPSDAE 375
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+E L + K+ V ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 429 RMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 488
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ +A +LV EL +L ++D
Sbjct: 489 GTAYTLITQKEVRFAGELVHCLIAAGQDVPNELMDLAMKD 528
>gi|294892441|ref|XP_002774065.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239879269|gb|EER05881.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 674
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 144/264 (54%), Gaps = 49/264 (18%)
Query: 72 EIIKSKIKIDYQ-----QLRKNFYTQAREITRMSP----AYRKQLDLKI-REKCAPKPIK 121
++ S I I++Q +LRKNFY + + M+P R+ LD++I R + P PI+
Sbjct: 153 QLGASLIPINWQDTQLVELRKNFYVEDPRVAAMTPEEVDQVRRTLDIEILRGENVPNPIQ 212
Query: 122 TWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLR 181
T+ + L IL+ ++ E P IQ + +SG D V I ETGSGKTLAF++P +
Sbjct: 213 TFDEACLPDYILKEINRAGFEKPTPIQVQGWPVALSGRDMVGIAETGSGKTLAFMIPAVI 272
Query: 182 HIWEQPPVVPGDDSPVGLVMAPTGELVRQ------QVRRGRMIDLLC------------- 222
HI QP + G D P+ L++APT EL Q + R I C
Sbjct: 273 HINAQPYLQKG-DGPIVLILAPTRELALQIKAECDRFGRSSRITNTCVYGGTQRGPQARA 331
Query: 223 -KNGVKI----------------TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDR 265
+NGV+I TNL RVTYLV+DEADRM DMGFEPQ+ +IV IRPDR
Sbjct: 332 LQNGVEICIATPGRLIDFLESGTTNLKRVTYLVMDEADRMLDMGFEPQVRKIVSQIRPDR 391
Query: 266 QAVLFSPTFPPRVEILARKTNVCN 289
Q +++S T+P V+ LAR ++CN
Sbjct: 392 QTLMWSATWPKEVQHLAR--DICN 413
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + IA V +RGLD K+++ VIN+D P EDYVH ++ A+ F S
Sbjct: 510 KTGRSAIMIATDVASRGLDVKDVKYVINYDFPGTIEDYVHRIGRTGRAGASGVAYSFFSP 569
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+ A LV + V + L+ +A
Sbjct: 570 DKGKLARQLVNCLREANQSVPEALETIA 597
>gi|195376889|ref|XP_002047225.1| GJ13322 [Drosophila virilis]
gi|194154383|gb|EDW69567.1| GJ13322 [Drosophila virilis]
Length = 797
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/248 (37%), Positives = 131/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY+ +NFYT +I ++ R+ L +K+ PKP+ ++ G ++L+
Sbjct: 233 EIDYEPFERNFYTPHEDIAQLDEEQVRELRRTLGVKVSGALPPKPVSSFGHFGFDEQLLK 292
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+ K + P IQA A +SG D + I +TGSGKT AF+ P+L H+ +Q + PG D
Sbjct: 293 SVRKAEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRELRPG-D 351
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 352 GPIGLILAPTRELSLQIYNEAKKFGKVYNINVVCCYGGGSKWEQSKALEQGCEIVVATPG 411
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 412 RMIDMV---KMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFK 468
Query: 276 PRVEILAR 283
R+E LAR
Sbjct: 469 KRIERLAR 476
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C++ +A V ARGLD + V+N+D D + + H ++ K A+ +++
Sbjct: 571 KRKECDILVATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAYTLVTD 630
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
++ +A LV+ E ++ V DDL +A
Sbjct: 631 KDKEFAGHLVRNLEGADQTVPDDLMELA 658
>gi|207347520|gb|EDZ73663.1| YBR237Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 799
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 176/351 (50%), Gaps = 58/351 (16%)
Query: 7 KQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS----HSASDYELFMKRA 62
++ P IE DPLD FM ++ + + G L ED D ++
Sbjct: 126 QKAPEHDIEKDPLDEFMTSLKEEKMSNSKGMYDRGDILDVEDQLFELGGTDDEDVEDNTD 185
Query: 63 KKKKRDKNREIIKSKIKIDY------QQLRKNFYTQAREITRMSPAYRKQL-----DLKI 111
+ K ++K Y + +KNFY ++ ++ MS ++L ++KI
Sbjct: 186 NSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNFYIESETVSSMSEMEVEELRFSLDNIKI 245
Query: 112 REKCAPKPIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSG 170
+ PKP+ W Q GL+T + + KL+ + IQ+ A I+SG D + I++TGSG
Sbjct: 246 KGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSG 305
Query: 171 KTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR------------- 214
KT+++LLP+LR + Q P+ + P+GL++APT EL + ++V +
Sbjct: 306 KTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCC 365
Query: 215 ------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
GR ID+L N K+ + R+T++V+DEADR+FD+GF
Sbjct: 366 TGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGF 425
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
EPQIT+I++ +RPD+Q VLFS TFP ++ A V + I+ ++ ++G+
Sbjct: 426 EPQITQIMKTVRPDKQCVLFSATFPNKLRSFA--VRVLHSPISITINSKGM 474
>gi|195493240|ref|XP_002094331.1| GE20258 [Drosophila yakuba]
gi|194180432|gb|EDW94043.1| GE20258 [Drosophila yakuba]
Length = 789
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 158/325 (48%), Gaps = 63/325 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ KNFYTQ +I + R+ L +K+ PKP+ ++ G ++++
Sbjct: 223 EIEYEPFEKNFYTQHDDIAALDEEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIK 282
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A +SG D + I +TGSGKT AF+ PML H+ +Q + PG D
Sbjct: 283 AVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPG-D 341
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 342 GPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATPG 401
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ ++FS TF
Sbjct: 402 RMIDMV---KMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFK 458
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVIN---FDAPNDYEDYVHHCCQSWLKS 332
R+E LAR + + VR D E I + PN + + +WL
Sbjct: 459 KRIERLARDV------LTDPVRIVQGDLNEANQDITQSVYVFPNPLQKW------NWLLV 506
Query: 333 CAFRFISEENA-IYATDLVKAFELS 356
+F+SE + I+ T V A +S
Sbjct: 507 HLVKFLSEGSVLIFVTKKVDAETVS 531
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C++ +A V ARGLD ++ V+N+D D E + H ++ K AF +++
Sbjct: 561 KRKECDILVATDVAARGLDIPHIKNVVNYDTARDIETHTHRIGRTGRAGEKGNAFTLVTD 620
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
++ +A LV+ E ++ V DDL +A
Sbjct: 621 KDKEFAGHLVRNLEGADQQVPDDLMELA 648
>gi|190408613|gb|EDV11878.1| pre-mRNA processing ATP-dependent RNA helicase PRP5 [Saccharomyces
cerevisiae RM11-1a]
Length = 849
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 176/351 (50%), Gaps = 58/351 (16%)
Query: 7 KQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS----HSASDYELFMKRA 62
++ P IE DPLD FM ++ + + G L ED D ++
Sbjct: 126 QKAPEHDIEKDPLDEFMTSLKEEKMSNSKGMYDRGDILDVEDQLFELGGTDDEDVEDNTD 185
Query: 63 KKKKRDKNREIIKSKIKIDY------QQLRKNFYTQAREITRMSPAYRKQL-----DLKI 111
+ K ++K Y + +KNFY ++ ++ MS ++L ++KI
Sbjct: 186 NSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNFYIESETVSSMSEMEVEELRFSLDNIKI 245
Query: 112 REKCAPKPIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSG 170
+ PKP+ W Q GL+T + + KL+ + IQ+ A I+SG D + I++TGSG
Sbjct: 246 KGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSG 305
Query: 171 KTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR------------- 214
KT+++LLP+LR + Q P+ + P+GL++APT EL + ++V +
Sbjct: 306 KTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCC 365
Query: 215 ------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
GR ID+L N K+ + R+T++V+DEADR+FD+GF
Sbjct: 366 TGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGF 425
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
EPQIT+I++ +RPD+Q VLFS TFP ++ A V + I+ ++ ++G+
Sbjct: 426 EPQITQIMKTVRPDKQCVLFSATFPNKLRSFA--VRVLHSPISITINSKGM 474
>gi|290878256|emb|CBK39315.1| Prp5p [Saccharomyces cerevisiae EC1118]
gi|323338744|gb|EGA79960.1| Prp5p [Saccharomyces cerevisiae Vin13]
gi|365766935|gb|EHN08424.1| Prp5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392301086|gb|EIW12175.1| Prp5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 849
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 176/351 (50%), Gaps = 58/351 (16%)
Query: 7 KQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS----HSASDYELFMKRA 62
++ P IE DPLD FM ++ + + G L ED D ++
Sbjct: 126 QKAPEHDIEKDPLDEFMTSLKEEKMSNSKGMYDRGDILDVEDQLFELGGTDDEDVEDNTD 185
Query: 63 KKKKRDKNREIIKSKIKIDY------QQLRKNFYTQAREITRMSPAYRKQL-----DLKI 111
+ K ++K Y + +KNFY ++ ++ MS ++L ++KI
Sbjct: 186 NSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNFYIESETVSSMSEMEVEELRFSLDNIKI 245
Query: 112 REKCAPKPIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSG 170
+ PKP+ W Q GL+T + + KL+ + IQ+ A I+SG D + I++TGSG
Sbjct: 246 KGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSG 305
Query: 171 KTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR------------- 214
KT+++LLP+LR + Q P+ + P+GL++APT EL + ++V +
Sbjct: 306 KTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCC 365
Query: 215 ------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
GR ID+L N K+ + R+T++V+DEADR+FD+GF
Sbjct: 366 TGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGF 425
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
EPQIT+I++ +RPD+Q VLFS TFP ++ A V + I+ ++ ++G+
Sbjct: 426 EPQITQIMKTVRPDKQCVLFSATFPNKLRSFA--VRVLHSPISITINSKGM 474
>gi|391348261|ref|XP_003748366.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Metaseiulus
occidentalis]
Length = 748
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 134/247 (54%), Gaps = 47/247 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I YQ KNFY + EI+ ++ R L +K+ A KP+ ++ L +++
Sbjct: 194 IQYQPFEKNFYDEHPEISNLTADEVQKLRTTLGIKVIGAMASKPVVSFAHMNLDANLMKA 253
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E P IQA A L ++G D + I +TGSGKTLAFL+P+L HI +Q + G +
Sbjct: 254 VRKALYETPTPIQAQAIPLALNGRDLIGIAKTGSGKTLAFLIPILVHIMDQAELKVG-EG 312
Query: 196 PVGLVMAPTGELVRQ---QVRR------------------------------------GR 216
P+GL++APT EL Q + ++ GR
Sbjct: 313 PIGLILAPTRELAMQIYTEAKKFAKVYNVNVACCFGGGSKWEQSKALAEGAEIVVATPGR 372
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID++ +K TNL RVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ ++FS TF
Sbjct: 373 MIDMI---KMKATNLERVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQCLMFSATFKK 429
Query: 277 RVEILAR 283
R+E LAR
Sbjct: 430 RIEKLAR 436
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATD 348
+A V ARGLD + VINFD D + + H ++ K A+ SE++ +A
Sbjct: 545 VATDVCARGLDISHIRTVINFDTARDIDTHTHRVGRTGRAGQKGLAYTLFSEKDKEFAGH 604
Query: 349 LVKAFELSELVVRDDLKAVA 368
LV+ E + V DL +A
Sbjct: 605 LVRNLEGANQKVPKDLMDLA 624
>gi|281212472|gb|EFA86632.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 728
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 138/265 (52%), Gaps = 49/265 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
KI Y + K FY + +I +S RK LD++I K P+ ++ G +++
Sbjct: 207 KIQYFEFEKCFYDECSDIANLSTERVFELRKDLDIRINGKDLVNPVTSFGHYGFDNLLIQ 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+ K +E+P +IQ A + +SG D +AI +TGSGKT +F+ P + HI +QP + G D
Sbjct: 267 SIQKQGYESPTSIQKQAVPIALSGRDLIAIAKTGSGKTASFIWPAIPHIMDQPYLEKG-D 325
Query: 195 SPVGLVMAPTGELVRQ---------------------------QVRR------------G 215
P+ L +APT EL Q Q R G
Sbjct: 326 GPIALFVAPTRELAHQIYLETQKFAKPYKIRTSVIYGGVTKLLQCRELKAGCEILVTTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID++ +K T + RVTYLVLDEADRMFDMGF PQ+ IV IRPDRQ +LFS TFP
Sbjct: 386 RLIDMI---KLKATKMNRVTYLVLDEADRMFDMGFGPQVQSIVGQIRPDRQTLLFSATFP 442
Query: 276 PRVEILARKTNV--CNLSIANSVRA 298
P +E LAR + +SI N+ A
Sbjct: 443 PNIEELARNILIDPIRISIGNTGSA 467
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATD 348
+A V ARGLD + V+NFD D + + H ++ + A+ I+ ++ ++ +
Sbjct: 553 VATDVAARGLDINLIRNVVNFDPSRDIDSHTHRIGRTGRAGTQGIAYTLITPKDIHFSAE 612
Query: 349 LVKAFELSELVVRDDLKAVA 368
LVK E + +V +L ++A
Sbjct: 613 LVKHLEEANQIVPPELISIA 632
>gi|323507844|emb|CBQ67715.1| probable RNA helicase dbp2 (DEAD box protein) [Sporisorium
reilianum SRZ2]
Length = 536
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 144/280 (51%), Gaps = 50/280 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
+D KNFY + ++ S A YR + I+ + PKP+ ++ + G IL
Sbjct: 68 VDLVNFEKNFYVEDPRVSSRSEAEVQQYRASKQMTIQGQNVPKPVTSFDEAGFPEYILSE 127
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K+ P AIQ+ A + +SG D VAI ETGSGKT+ F LP + HI QP + PG D
Sbjct: 128 IKKMGFSEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMVHINAQPLLKPG-DG 186
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+ L++APT EL Q Q+R GR
Sbjct: 187 PIALILAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKGPQIRDLQRGAEICIATPGR 246
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID++ TNL RVTYLV+DEADRM DMGFEPQI +I+Q IRPDRQ ++FS T+P
Sbjct: 247 LIDMVDAGK---TNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPK 303
Query: 277 RVEILARK--TNVCNLSIANSVRARGLDEKE-LELVINFD 313
V+ LA N ++I ++ A + K+ +E+ F+
Sbjct: 304 EVQRLAGDFLNNFAQVNIGSTELAANHNVKQIIEVCTEFE 343
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHH---CCQSWLKSCAFRFISE 340
K+ + +A +V +RGLD K++ VIN+D P + EDYVH ++ A+ + +
Sbjct: 406 KSGRSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTP 465
Query: 341 ENAIYATDLV 350
EN+ A +LV
Sbjct: 466 ENSKSARELV 475
>gi|115452607|ref|NP_001049904.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|122247124|sp|Q10MH8.1|RH24_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 24
gi|108707754|gb|ABF95549.1| DEAD/DEAH box helicase family protein, expressed [Oryza sativa
Japonica Group]
gi|113548375|dbj|BAF11818.1| Os03g0308500 [Oryza sativa Japonica Group]
gi|215737377|dbj|BAG96306.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 770
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 184/390 (47%), Gaps = 92/390 (23%)
Query: 15 EIDPLDAFMNDMECSF-------------------AEHPNNCFRLGRR-----LPAEDSH 50
EIDPLDAFM +++ + P F ++ L A+ H
Sbjct: 67 EIDPLDAFMAEIQEEIRAPPPAPKPEALRRADSDDEDDPVESFLRAKKDSGLALAADAMH 126
Query: 51 SASDYELFMKRAKKK--------KRDKNREII-KSKIK---------IDYQQLRKNFYTQ 92
+ D + + A K D N ++ K KI+ I+Y+ K+FY +
Sbjct: 127 AGYDSDEEVYAAAKAVDAGMMEYDSDDNPIVVDKKKIEPIPPLDHSTIEYEPFNKDFYEE 186
Query: 93 AREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQ 148
++ MS Y K L +++ P+PIK++ G +++ +K +E P IQ
Sbjct: 187 KPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQ 246
Query: 149 APASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELV 208
A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++ P+G+V APT EL
Sbjct: 247 CQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEGPIGVVCAPTRELA 305
Query: 209 RQ---------------------------QVRR------------GRMIDLLCKNGVKIT 229
Q Q + GR+IDLL +K
Sbjct: 306 HQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALK-- 363
Query: 230 NLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCN 289
+ R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P +VE LAR+ +
Sbjct: 364 -MFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLARE--ILT 420
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYE 319
I +V G ++++ V+N P+D E
Sbjct: 421 DPIRVTVGQVGSANEDIKQVVNV-LPSDAE 449
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+E L + K+ V ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 503 RMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 562
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ +A +LV EL +L ++D
Sbjct: 563 GTAYTLITQKEVRFAGELVHCLIAAGQDVPNELMDLAMKD 602
>gi|156844695|ref|XP_001645409.1| hypothetical protein Kpol_534p31 [Vanderwaltozyma polyspora DSM
70294]
gi|160419163|sp|A7TJK8.1|PRP5_VANPO RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|156116071|gb|EDO17551.1| hypothetical protein Kpol_534p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 872
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 139/248 (56%), Gaps = 46/248 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSPAYRKQLDL-----KIREKCAPKPIKTWRQTGLTTKILET 135
D + K+FY++ E+ M+ +++ L K++ K PK I W Q GL T I+
Sbjct: 231 DLEPFPKSFYSEPDEVKLMTDDEVEEMRLSLGGIKVKGKHCPKLITRWSQLGLPTDIMNL 290
Query: 136 FSK-LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+K L ++ P AIQ+ A I+SG D + I++TGSGKT++++LPMLR I Q + +
Sbjct: 291 ITKELKYDEPTAIQSQAIPAIMSGRDLIGISKTGSGKTISYILPMLRQIKAQRTLSKNET 350
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------- 214
P+GL++APT EL + ++V +
Sbjct: 351 GPLGLILAPTRELALQINEEVEKFTKQDRSIRTICCTGGSEMKKQINDLKRGVEIVVATP 410
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+ID+L N K+ + R+T++V+DEADR+FDMGFEPQIT+I++ +RPD+Q VLFS TF
Sbjct: 411 GRLIDILTLNSGKLISTKRITFVVMDEADRLFDMGFEPQITQIMKTVRPDKQCVLFSATF 470
Query: 275 PPRVEILA 282
P ++ A
Sbjct: 471 PNKLRSFA 478
>gi|320582894|gb|EFW97111.1| pre-mRNA processing RNA-helicase, putative [Ogataea parapolymorpha
DL-1]
Length = 752
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 156/328 (47%), Gaps = 61/328 (18%)
Query: 3 ETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNC---FRLGRRLPAEDSHSASDYELFM 59
E TT P+ LD + +ME S +H + F +P+E A L
Sbjct: 76 EQTTDDAPL------DLDTLLENMEHS--QHKDGSAALFESDDDIPSESDTDAE--HLDP 125
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLDLK----IREKC 115
+ + +KN++ + ++ R+ Y ++ I+ +SP L L+ +R K
Sbjct: 126 AKLLQAINEKNKKSVPEHPPSEHPYTRR-LYNESAFISSLSPDEVDSLRLRDAITVRGKS 184
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
+PI TW GL + L E P IQ A ++SG D + I +TGSGKTLAF
Sbjct: 185 VARPIITWDHLGLPLSLRSALDSLGFEAPTPIQCEALPNVMSGHDLIGIAKTGSGKTLAF 244
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---------------------------V 208
LLP+ R + P S LVM PT EL +
Sbjct: 245 LLPLFRQLLANPAA----PSVRALVMTPTRELAMQIFNESSVFLEALKLRGCCCYGGQSI 300
Query: 209 RQQVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
QQ+ GR+IDLLC N ++ L+ VTYLVLDEADRMFDMGFEPQ+ +
Sbjct: 301 SQQIAEIKKGCDLVVGTPGRIIDLLCANNGRVLRLSHVTYLVLDEADRMFDMGFEPQVMK 360
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARK 284
I++ RPDRQ VLFS TFPPR+E LAR+
Sbjct: 361 ILKVTRPDRQTVLFSATFPPRMEALARR 388
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 64/113 (56%), Gaps = 6/113 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+NV ++ +A SV +RGLD K+L LV+N+D+PN EDYVH ++ A F++
Sbjct: 483 KSNVIDILVATSVASRGLDVKDLNLVVNYDSPNHMEDYVHRVGRTGRAGRSGTAVTFVTR 542
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQV-HGTGHGGVAL 392
A+D+V+ ELS +L +A F K L G+V +G+G GG L
Sbjct: 543 HQERSASDIVRLLELSGTQPPAELAQIASRFREK--LKRGEVKYGSGFGGRGL 593
>gi|148906344|gb|ABR16327.1| unknown [Picea sitchensis]
Length = 504
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 132/253 (52%), Gaps = 50/253 (19%)
Query: 79 KIDYQQL---RKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D++ L KNFY + I M+ YR + ++ I + PKP+K + G
Sbjct: 50 KQDFENLIPFEKNFYVETPGIASMTEDEVREYRNRREITIDGRDVPKPVKNFGDAGFPDY 109
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
++E K P IQA + + G D + I ETGSGKTLA+LLP + H+ QP + P
Sbjct: 110 VIEEIVKAGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPYLAP 169
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ LV+APT EL Q QVR
Sbjct: 170 G-DGPIVLVLAPTRELAVQIQQEAAKFGASSKIKNTCIYGGAPKGPQVRDLSKGVEIVIA 228
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S
Sbjct: 229 TPGRLIDMLES---QHTNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSA 285
Query: 273 TFPPRVEILARKT 285
T+P VE+LAR++
Sbjct: 286 TWPKEVELLARQS 298
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ + +
Sbjct: 391 KAGKSPIMTATDVAARGLDVKDIKCVINYDFPGSMEDYVHRIGRTGRAGAKGTAYTYFTA 450
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGV 390
NA +A DL+K E + + L + S A G + G G G +
Sbjct: 451 ANARFARDLIKILEEAGQSISPSLAEMGRSSAASGGYGGFRDRGRGSGNL 500
>gi|299749479|ref|XP_002911384.1| RNA helicase [Coprinopsis cinerea okayama7#130]
gi|298408458|gb|EFI27890.1| RNA helicase [Coprinopsis cinerea okayama7#130]
Length = 425
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 133/243 (54%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
++ KNFY + + IT MS +R+ D++++ + P+PI+++ + G ++ T
Sbjct: 66 ERFEKNFYVEDKRITAMSEREVEEFRRSKDIRVQGRNVPRPIRSFDECGFPEYLMSTIRA 125
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ A + +SG D VAI +TGSGKT++F LP + HI QP + PG D P+
Sbjct: 126 QGFDAPTPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAPG-DGPIA 184
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL Q Q+R GR+ID
Sbjct: 185 LVLAPTRELAVQIQQECSKFGGNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLID 244
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 245 MLETHK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQ 301
Query: 280 ILA 282
LA
Sbjct: 302 KLA 304
>gi|18424667|ref|NP_568964.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
gi|16974623|gb|AAL31214.1| AT5g63120/MDC12_8 [Arabidopsis thaliana]
gi|23308415|gb|AAN18177.1| At5g63120/MDC12_8 [Arabidopsis thaliana]
gi|332010324|gb|AED97707.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
Length = 484
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 130/245 (53%), Gaps = 49/245 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY ++ + M+ YR + D+ + + PKP+K ++ ILE +KL
Sbjct: 124 HFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKL 183
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQA + + G D + I ETGSGKTLA+LLP L H+ Q P + DD P+ L
Sbjct: 184 GFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQ-PRLGQDDGPIVL 242
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 243 ILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 302
Query: 221 L-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L C++ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +L+S T+P VE
Sbjct: 303 LECQH----TNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVE 358
Query: 280 ILARK 284
LAR+
Sbjct: 359 TLARQ 363
>gi|42573778|ref|NP_974985.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
gi|108861888|sp|Q8W4R3.2|RH30_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 30
gi|110741550|dbj|BAE98724.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
gi|332010323|gb|AED97706.1| DEAD-box ATP-dependent RNA helicase 30 [Arabidopsis thaliana]
Length = 591
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 130/245 (53%), Gaps = 49/245 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY ++ + M+ YR + D+ + + PKP+K ++ ILE +KL
Sbjct: 124 HFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKL 183
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQA + + G D + I ETGSGKTLA+LLP L H+ Q P + DD P+ L
Sbjct: 184 GFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQ-PRLGQDDGPIVL 242
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 243 ILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 302
Query: 221 L-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L C++ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +L+S T+P VE
Sbjct: 303 LECQH----TNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVE 358
Query: 280 ILARK 284
LAR+
Sbjct: 359 TLARQ 363
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKS 332
R +LA K+ + A V ARGLD K+++ V+N+D PN EDY+H ++ K
Sbjct: 449 RDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKG 508
Query: 333 CAFRFISEENAIYATDLVKAFELSELVVRDDLKAV 367
AF F + +NA +A +LVK + + VV L A+
Sbjct: 509 MAFTFFTHDNAKFARELVKILQEAGQVVPPTLSAL 543
>gi|164657065|ref|XP_001729659.1| hypothetical protein MGL_3203 [Malassezia globosa CBS 7966]
gi|159103552|gb|EDP42445.1| hypothetical protein MGL_3203 [Malassezia globosa CBS 7966]
Length = 560
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 152/301 (50%), Gaps = 58/301 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + +T S +R+ ++ +R P+P+ T+ +TG I+ +KL
Sbjct: 95 FEKNFYKEDPRVTERSEQEVNEFRRAKEITLRGSNVPRPVTTFEETGYPDYIMREINKLG 154
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQ+ A L +SG D VAI ETGSGKT+ F LP + HI Q P+ G D P+ L+
Sbjct: 155 FTEPSAIQSQAWPLALSGRDLVAIAETGSGKTIGFALPSILHIKAQAPLQYG-DGPIALI 213
Query: 201 MAPTGEL----------------VR-----------QQVRR------------GRMIDLL 221
+APT EL VR QQ+R GR+ID++
Sbjct: 214 LAPTRELAVQIQNECQRFGSACRVRTTSVYGGVPKGQQIRSLQRGAEIVIATPGRLIDMM 273
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLV+DEADRM DMGFEPQI +IV+ IRPDRQ ++FS T+P V+ +
Sbjct: 274 E---IGKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVEQIRPDRQTLMFSATWPKEVQRM 330
Query: 282 AR-------KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSCA 334
A + N+ ++ +A + + + +E+ FD ++ H Q K
Sbjct: 331 ASDFLNDYVQVNIGSMELAANHNVKQV----IEVCTEFDKRGRLIKHLEHISQENGKVII 386
Query: 335 F 335
F
Sbjct: 387 F 387
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHH---CCQSWLKSCAFRFISE 340
K+ + +A +V +RGLD K++ VIN D P + EDY+H ++ K A F +
Sbjct: 428 KSGNSPIMVATAVASRGLDVKDISYVINSDFPTNTEDYIHQIGRTGRAGRKGVAITFFTS 487
Query: 341 ENAIYATDLV 350
EN+ A DLV
Sbjct: 488 ENSKSARDLV 497
>gi|297797303|ref|XP_002866536.1| hypothetical protein ARALYDRAFT_496494 [Arabidopsis lyrata subsp.
lyrata]
gi|297312371|gb|EFH42795.1| hypothetical protein ARALYDRAFT_496494 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 130/245 (53%), Gaps = 49/245 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY ++ + M+ YR + D+ + + PKP+K ++ ILE +KL
Sbjct: 121 HFEKNFYVESPSVQAMTEQDVAMYRTERDISVEGRDVPKPVKLFQDANFPDNILEAIAKL 180
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQA + + G D + I ETGSGKTLA+LLP L H+ Q P + DD P+ L
Sbjct: 181 GFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQ-PRLGQDDGPIVL 239
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 240 ILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 299
Query: 221 L-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L C++ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +L+S T+P VE
Sbjct: 300 LECQH----TNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVE 355
Query: 280 ILARK 284
LAR+
Sbjct: 356 SLARQ 360
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
Query: 273 TFPPRVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQS 328
T P R +LA K+ + A V ARGLD K+++ V+N+D PN EDY+H ++
Sbjct: 442 TQPERDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRA 501
Query: 329 WLKSCAFRFISEENAIYATDLVKAFELSELVVRDDLKAV 367
K AF F + +NA +A +L+K + + VV L A+
Sbjct: 502 GAKGMAFTFFTHDNAKFARELIKILQEAGQVVPPTLSAL 540
>gi|10177293|dbj|BAB10554.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana]
Length = 564
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 130/245 (53%), Gaps = 49/245 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY ++ + M+ YR + D+ + + PKP+K ++ ILE +KL
Sbjct: 97 HFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKL 156
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQA + + G D + I ETGSGKTLA+LLP L H+ Q P + DD P+ L
Sbjct: 157 GFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQ-PRLGQDDGPIVL 215
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 216 ILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 275
Query: 221 L-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L C++ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +L+S T+P VE
Sbjct: 276 LECQH----TNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVE 331
Query: 280 ILARK 284
LAR+
Sbjct: 332 TLARQ 336
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKS 332
R +LA K+ + A V ARGLD K+++ V+N+D PN EDY+H ++ K
Sbjct: 422 RDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKG 481
Query: 333 CAFRFISEENAIYATDLVKAFELSELVVRDDLKAV 367
AF F + +NA +A +LVK + + VV L A+
Sbjct: 482 MAFTFFTHDNAKFARELVKILQEAGQVVPPTLSAL 516
>gi|297847866|ref|XP_002891814.1| hypothetical protein ARALYDRAFT_474570 [Arabidopsis lyrata subsp.
lyrata]
gi|297337656|gb|EFH68073.1| hypothetical protein ARALYDRAFT_474570 [Arabidopsis lyrata subsp.
lyrata]
Length = 501
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 139/267 (52%), Gaps = 54/267 (20%)
Query: 64 KKKRDKNREIIKSKIKIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCA 116
KK D N +S K+D L KNFY ++ + M+ YRK ++ + K
Sbjct: 39 KKDNDGN----ESPRKLDLDGLTPFEKNFYVESPTVAAMTDTEVEEYRKLREITVEGKDI 94
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP+K++R G +LE K P IQ+ + + G D + I ETGSGKT+++L
Sbjct: 95 PKPVKSFRDVGFPDYVLEEIKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTISYL 154
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LP + H+ QP + PG D P+ LV+APT EL Q
Sbjct: 155 LPAIVHVNAQPILAPG-DGPIVLVLAPTRELAVQIQQEASKFGSSSKIKSTCIYGGVPKG 213
Query: 211 -QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
QVR GR+ID++ N TNL RVTYLVLDEADRM DMGF+PQI +I
Sbjct: 214 PQVRDLQKGVEIVIATPGRLIDMMESNN---TNLRRVTYLVLDEADRMLDMGFDPQIRKI 270
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
V +IRPDRQ + +S T+P VE L++K
Sbjct: 271 VSHIRPDRQTLYWSATWPKEVEQLSKK 297
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATDL 349
A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F + NA +A +L
Sbjct: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKEL 459
Query: 350 VKAFELSELVVRDDLKAVADS 370
E + V +L ++ S
Sbjct: 460 SNILEEAGQKVSPELASMGRS 480
>gi|19113315|ref|NP_596523.1| ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces pombe 972h-]
gi|10720389|sp|P24782.2|DBP2_SCHPO RecName: Full=ATP-dependent RNA helicase dbp2; AltName:
Full=p68-like protein
gi|173419|gb|AAA35319.1| p68 RNA helicase [Schizosaccharomyces pombe]
gi|3810840|emb|CAA21801.1| ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces pombe]
Length = 550
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 129/242 (53%), Gaps = 47/242 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + + S A YRK+ ++ + PKP+ T+ + G +L+ +L
Sbjct: 82 FQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLG 141
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
E P IQ A + +SG D V I+ TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 142 FEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPG-DGPIVLV 200
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR++D+L
Sbjct: 201 LAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDML 260
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
N TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ V+FS T+P V+ L
Sbjct: 261 DSNK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRL 317
Query: 282 AR 283
AR
Sbjct: 318 AR 319
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V +RG+D K + V N+D P + EDYVH ++ K A+ + +
Sbjct: 416 RTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTS 475
Query: 341 ENAIYATDLV 350
+NA A +LV
Sbjct: 476 DNAKQARELV 485
>gi|194751055|ref|XP_001957842.1| GF23818 [Drosophila ananassae]
gi|190625124|gb|EDV40648.1| GF23818 [Drosophila ananassae]
Length = 795
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 148/308 (48%), Gaps = 62/308 (20%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y KNFYT+ +I + R+ L +K+ PKP+ ++ G +L+
Sbjct: 219 EIEYDSFEKNFYTEHEDIAALDEEKVRDLRRTLGVKVTGPSPPKPVTSFGHFGFDEPLLK 278
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A +SG D + I +TGSGKT AF+ P+L H+ +Q + PG D
Sbjct: 279 AVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPLLMHLMDQKELQPG-D 337
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 338 GPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIVVATPG 397
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 398 RMIDMV---KMKATNLKRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFK 454
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVIN---FDAPNDYEDYVHHCCQSWLKS 332
R+E LAR + + VR D E I F PN + + +WL
Sbjct: 455 KRIERLARDV------LTDPVRIVQGDLNEANQDITQSVFVFPNPLQKW------NWLLC 502
Query: 333 CAFRFISE 340
+F+SE
Sbjct: 503 HLVKFLSE 510
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I K C++ +A V ARGLD + V+N+D D + + H ++ K AF
Sbjct: 553 ITQFKKKECDILVATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAFT 612
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+++++ +A LV+ E ++ V +DL +A
Sbjct: 613 LVTDKDKEFAGHLVRNLEGADQQVPEDLMELA 644
>gi|443706339|gb|ELU02447.1| hypothetical protein CAPTEDRAFT_155002 [Capitella teleta]
Length = 806
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/248 (38%), Positives = 131/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y++ KNFY EI+ ++P R L +K+ P P+ ++ +++
Sbjct: 166 EIEYEKFTKNFYDPHPEISSLTPEKVHDLRNSLGIKVSGIMPPHPVSSFPHFQFDENLMK 225
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+ K + P IQA + +SG D + I +TGSGKT AF+ P+L HI +Q P+ PG D
Sbjct: 226 SIRKAGYTQPTPIQAQGIPIGLSGRDIIGIAKTGSGKTAAFIWPLLVHIMDQKPLKPG-D 284
Query: 195 SPVGLVMAPTGELVRQ---------------------------QVRR------------G 215
P+GL+ APT EL +Q Q++ G
Sbjct: 285 GPIGLICAPTRELSQQIYQEAKKFGKVYNIKVVCAYGGGSMWEQIKACEECPEIIVCTPG 344
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMIDL+ K K TNL R TYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 345 RMIDLVRK---KATNLLRTTYLVFDEADRMFDMGFETQVRSIANHVRPDRQTMLFSATFR 401
Query: 276 PRVEILAR 283
RVE LAR
Sbjct: 402 KRVEKLAR 409
>gi|405969088|gb|EKC34097.1| ATP-dependent RNA helicase DDX42 [Crassostrea gigas]
Length = 788
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 127/247 (51%), Gaps = 47/247 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
IDY KNFY + +I ++ P RK+L +++ PKP+ ++ G ++
Sbjct: 252 IDYGPFVKNFYVEHEDIAKLQPNEVDELRKKLGIRVSGFNPPKPVSSFAHFGFDENLMSA 311
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K P IQA L ++G D + I +TGSGKT AFL P+L HI +Q + G +
Sbjct: 312 IRKSEFSQPTPIQAQGIPLALNGRDIIGIAKTGSGKTAAFLWPLLVHIMDQRELEEG-EG 370
Query: 196 PVGLVMAPTGELVRQQVRR---------------------------------------GR 216
PVGL++APT EL +Q GR
Sbjct: 371 PVGLILAPTRELSQQIYHEAKKFGKVYNINVVCAYGGGSMWEQTKACQEGAEIIVATPGR 430
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDL+ K + TNL RVTYLV DEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 431 LIDLVKK---RATNLERVTYLVFDEADRMFDMGFEPQVRSIANHVRPDRQTMLFSATFRK 487
Query: 277 RVEILAR 283
+VE LAR
Sbjct: 488 KVEKLAR 494
>gi|392572621|gb|EIW65766.1| hypothetical protein TREMEDRAFT_46029 [Tremella mesenterica DSM
1558]
Length = 558
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/311 (35%), Positives = 152/311 (48%), Gaps = 61/311 (19%)
Query: 78 IKIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTT 130
I +QQL KNFY + +TR S +R + +KI+ P+PIKT+ + G
Sbjct: 79 IDWGHQQLIKFEKNFYVEHPAVTRRSEKEINDFRAEKTMKIQGTNVPRPIKTFDEAGFPD 138
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
I+ + P IQ A + +SG D VAI ETGSGKT++F LP + HI QP +
Sbjct: 139 YIMTEIHAMGFAAPTPIQCQAWPMALSGRDVVAIAETGSGKTISFALPAMVHINAQPLLA 198
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ L++APT EL Q Q+R
Sbjct: 199 PG-DGPIVLILAPTRELAVQIQTEATKFGKSSRIRNTAIYGGAPKGPQIRDLQRGVEVVV 257
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS
Sbjct: 258 ATPGRLIDMLESGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFS 314
Query: 272 PTFPPRVEILAR-------KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHH 324
T+P V+ LA + N+ +L + + + + +E+ N+D N ++
Sbjct: 315 ATWPKDVQRLAMDFLHDFIQVNIGSLDLTANHNVQQI----VEICTNYDKRNMMLKHLEQ 370
Query: 325 CCQSWLKSCAF 335
Q K F
Sbjct: 371 ISQENAKVLIF 381
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + IA V +RG+D ++++ VIN+D PN+ EDYVH ++ A+ F +
Sbjct: 422 KSGRSPIMIATDVASRGIDVRDIKYVINYDFPNNCEDYVHRIGRTGRAGQTGTAYTFFTA 481
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+N+ A +LV S+ + +L +A
Sbjct: 482 DNSKSARELVGILRESKADIPPELAEMA 509
>gi|195021550|ref|XP_001985416.1| GH17046 [Drosophila grimshawi]
gi|193898898|gb|EDV97764.1| GH17046 [Drosophila grimshawi]
Length = 811
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 131/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ +NFYT +I ++ R+ L +K+ PKP+ ++ G ++L+
Sbjct: 246 EIEYEPFERNFYTPHEDIAQLDEDQVRELRRTLGVKVSGALPPKPVSSFGHFGFDDQLLK 305
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+ K + P IQA A +SG D + I +TGSGKT AF+ P+L H+ +Q + PG D
Sbjct: 306 SVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRELRPG-D 364
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 365 GPIGLILAPTRELSLQIYNEAKKFGKVYNINVVCCYGGGSKWEQSKALEQGCEIVVATPG 424
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 425 RMIDMVK---MKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFK 481
Query: 276 PRVEILAR 283
R+E LAR
Sbjct: 482 KRIERLAR 489
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K C++ +A V ARGLD + VIN+D D + + H ++ K A+
Sbjct: 580 IMQFKRKECDILVATDVAARGLDIPHIRNVINYDIARDIDTHTHRIGRTGRAGEKGNAYT 639
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+++++ +A LV+ E ++ V DDL +A
Sbjct: 640 LVTDKDKEFAGHLVRNLEGADQAVPDDLMELA 671
>gi|440801541|gb|ELR22559.1| ATPdependent RNA helicase dbp2, putative [Acanthamoeba castellanii
str. Neff]
Length = 706
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 131/243 (53%), Gaps = 48/243 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY +A + M+ A YRKQ + + + + PKPI+T+ + I++T
Sbjct: 159 KFEKNFYVEAPTVASMTEAEVEEYRKQQHITVLQGRNVPKPIRTFEEAQFPDYIMQTVRS 218
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
L E P AIQA +SG D V + ETGSGKTLAF LP + HI QP + PG D P+
Sbjct: 219 LKFERPTAIQAQGWPCALSGRDMVGLAETGSGKTLAFTLPAIVHINAQPFLQPG-DGPIV 277
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
L++APT EL Q Q+R GR+ID
Sbjct: 278 LILAPTRELAVQIQEVANTFGLTSKIKNTCVYGGVPKGPQIRDLSRGVEIVIATPGRLID 337
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L TNL RVTYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+
Sbjct: 338 MLETGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIMEQIRPDRQTLMWSATWPKEVK 394
Query: 280 ILA 282
LA
Sbjct: 395 ALA 397
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARGLD K++ VIN+D + EDYVH ++ A+ F + + A
Sbjct: 500 IMVATDVAARGLDVKDVRYVINYDFASTAEDYVHRIGRTGRAGATGTAYSFFTSGDFKLA 559
Query: 347 TDLVKAF 353
L+K
Sbjct: 560 KRLIKVL 566
>gi|449019241|dbj|BAM82643.1| p68 RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 645
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 99/275 (36%), Positives = 143/275 (52%), Gaps = 56/275 (20%)
Query: 62 AKKKKRDKNREIIKSKIKIDYQQ---------LRKNFYTQAREITRMSP----AYRKQLD 108
++ + RD+ + + ID+ Q +NFY + E+ SP ++R++++
Sbjct: 124 SRGETRDRMGSLGANLSDIDWTQANNLDNLVPFERNFYQEHPEVAGRSPEHVASFRQRME 183
Query: 109 LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETG 168
+ +R K P P +++ + G I++ + P AIQA A + + G D + I ETG
Sbjct: 184 ITVRGKNVPNPCESFLEAGFPPAIVQCIQRAGFTAPTAIQAQAWPVALKGRDLIGIAETG 243
Query: 169 SGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------ 210
SGKT A+LLP L HI QPP+ G D P+ LV+APT EL Q
Sbjct: 244 SGKTCAYLLPALVHIHGQPPLRRG-DGPICLVLAPTRELAVQIQTEATKFGTASRIRNAC 302
Query: 211 ---------QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMG 249
Q R GR+ID L TNL RVTYLVLDEADRM DMG
Sbjct: 303 VYGGVSRGPQARELSRGIEILIATPGRLIDFLESG---RTNLRRVTYLVLDEADRMLDMG 359
Query: 250 FEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
FEPQ+ +IV IRPDRQ ++F+ T+P +V+++AR+
Sbjct: 360 FEPQLRKIVGQIRPDRQTLMFTATWPRQVQVIARE 394
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 7/108 (6%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ L +A V ARGLD K + V+N+D P EDYVH ++ A+ F +
Sbjct: 497 RSGQARLLVATDVAARGLDIKNISYVVNYDFPGTIEDYVHRIGRTGRAGSTGTAYSFFTP 556
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHG 388
NA A++LV+ E S+ +++ A + F+ + N H G G
Sbjct: 557 ANARLASELVQILEESQ----NEVPAELNQFVNRRNRKRTYEHSFGRG 600
>gi|224284362|gb|ACN39916.1| unknown [Picea sitchensis]
Length = 593
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 129/243 (53%), Gaps = 47/243 (19%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + +S AYRK+ ++ + + PKP++++R+ T +L +
Sbjct: 130 FEKNFYVEHPAVAALSDHEVSAYRKRREITVEGRDVPKPLRSFREASFTDHVLRELERAG 189
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQA + + G D + I ETGSGKTLA+LLP + HI QP + G D P+ LV
Sbjct: 190 FSEPTAIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHINAQPHLAHG-DGPIVLV 248
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID+L
Sbjct: 249 LAPTRELAVQIQQESVKFGTSSKIKSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 308
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ + +S T+P VE L
Sbjct: 309 E---ARHTNLRRVTYLVLDEADRMLDMGFEPQIRKIITQIRPDRQTLYWSATWPREVENL 365
Query: 282 ARK 284
AR+
Sbjct: 366 ARQ 368
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATDL 349
A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F + N +A +L
Sbjct: 471 ATDVAARGLDVKDIKCVINYDFPGSLEDYVHRIGRTGRAGAKGTAYSFFTAANGRFAREL 530
Query: 350 VKAFELSELVVRDDLKAV 367
V + + V +L A+
Sbjct: 531 VGILQEAGQRVNPELAAM 548
>gi|414866472|tpg|DAA45029.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 766
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 146/283 (51%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y K+FY + I+ MS Y K L +++ P+PIK + G ++
Sbjct: 174 IEYDAFTKDFYEEKPSISGMSDQEVTDYMKSLSIRVSGFDVPRPIKNFEDCGFHVPLMNA 233
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K +E P IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 234 IAKQAYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEG 292
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 293 PIGVICAPTRELAHQIYLEAKKFAKPYNLRVAAIYGGVSKFDQFKELKAGCEIVIATPGR 352
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDLL +K + R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P
Sbjct: 353 LIDLLKMKALK---MFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPY 409
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + I +V G ++++ V+N P+D E
Sbjct: 410 KVERLARE--ILTDPIRVTVGQVGGANEDIKQVVNV-LPSDVE 449
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+E L + K+ ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 503 RMETLQKFKSGTFHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 562
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ A +A +LV + EL +L ++D
Sbjct: 563 GTAYTLITQKEAHFAGELVHSLIAAGQDVPNELMDLAMKD 602
>gi|143361556|sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 20
Length = 494
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 130/243 (53%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY ++ + M+ AYR++ ++ + + PKP++ +R G +L+ +K
Sbjct: 50 RFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKA 109
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PG D P+ L
Sbjct: 110 GFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPG-DGPIVL 168
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q QVR GR+ID+
Sbjct: 169 VLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 228
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
+ + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S T+P VE
Sbjct: 229 IESHH---TNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQ 285
Query: 281 LAR 283
LAR
Sbjct: 286 LAR 288
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 383 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA 442
Query: 341 ENAIYATDLVKAFE 354
NA +A DL+ E
Sbjct: 443 ANARFAKDLINILE 456
>gi|160419164|sp|A6ZLH6.1|PRP5_YEAS7 RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|151946623|gb|EDN64845.1| RNA helicase [Saccharomyces cerevisiae YJM789]
Length = 849
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 176/351 (50%), Gaps = 58/351 (16%)
Query: 7 KQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS----HSASDYELFMKRA 62
+++P E DPLD FM ++ + + G L ED D ++
Sbjct: 126 QKVPEHDNEKDPLDEFMTSLKEEKMSNSKGMYDRGDILDVEDQLFELGGTDDEDVEDNTD 185
Query: 63 KKKKRDKNREIIKSKIKIDY------QQLRKNFYTQAREITRMSPAYRKQL-----DLKI 111
+ K ++K Y + +KNFY ++ ++ MS ++L ++KI
Sbjct: 186 NSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKI 245
Query: 112 REKCAPKPIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSG 170
+ PKP+ W Q GL+T + + KL+ + IQ+ A I+SG D + I++TGSG
Sbjct: 246 KGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSG 305
Query: 171 KTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR------------- 214
KT+++LLP+LR + Q P+ + P+GL++APT EL + ++V +
Sbjct: 306 KTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCC 365
Query: 215 ------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
GR ID+L N K+ + R+T++V+DEADR+FD+GF
Sbjct: 366 TGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGF 425
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
EPQIT+I++ +RPD+Q VLFS TFP ++ A V + I+ ++ ++G+
Sbjct: 426 EPQITQIMKTVRPDKQCVLFSATFPNKLRSFA--VRVLHSPISITINSKGM 474
>gi|410081872|ref|XP_003958515.1| hypothetical protein KAFR_0G03480 [Kazachstania africana CBS 2517]
gi|372465103|emb|CCF59380.1| hypothetical protein KAFR_0G03480 [Kazachstania africana CBS 2517]
Length = 852
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 178/369 (48%), Gaps = 77/369 (20%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDY----------ELFMKRAKK 64
++DPLDA MN + + E G L D + SD+ E K K+
Sbjct: 140 DVDPLDALMNGL--TGGEDSKGTTSRGDVL---DETTVSDFDDSDIVVTDDEFEAKNFKR 194
Query: 65 KKRDKNREIIKSKIKIDYQQL---RKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
R K+ + + +++K D L +K FY + EI M+ R LD +KI+
Sbjct: 195 IARMKSLKKV-TEVKYDKNNLEPFQKVFYQETPEIRNMTADEVSELRLNLDNIKIKGHGC 253
Query: 117 PKPIKTWRQTGLTTKILETFSK-LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
P PI W Q GL T I+ + + + IQA A I+SG D + I++TGSGKT+++
Sbjct: 254 PNPITRWSQLGLNTSIMNSIKNVMKFQELTPIQAQALPAIMSGRDVIGISKTGSGKTISY 313
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLP+LR + Q + + P+GLV+APT EL Q
Sbjct: 314 LLPLLRQVKSQRDLSNSETGPIGLVLAPTRELALQIHEEINKLINDDASLNCICCTGGSE 373
Query: 211 ------QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQIT 255
V+RG R IDLL N K+ + R+T++V+DEADR+FDMGFEPQ+T
Sbjct: 374 LKDQISSVKRGVKIVVATPGRFIDLLTINSGKLLSTGRITFVVMDEADRLFDMGFEPQVT 433
Query: 256 RIVQNIRPDRQAVLFSPTFPPRVEILARK------------TNVCNLSIANSVRARGLDE 303
+I++ IRPD+Q VLFS TF ++ A + N+ N +++ + R D
Sbjct: 434 QIMKAIRPDKQCVLFSATFSNKIRSFAMRVLKNPITITINSNNIVNENVSQNFRVCESDT 493
Query: 304 KELELVINF 312
++ + +I+
Sbjct: 494 QKFDELISL 502
>gi|291225668|ref|XP_002732809.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 795
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 134/248 (54%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y K+FY + +I+++ R++L +K+ PKP+ ++ G +++
Sbjct: 211 EINYSDFSKDFYEEHEDISQLRFSEMQELRRKLGVKVSGYDPPKPVSSFGHFGFDEQLMH 270
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA + +SG D + I +TGSGKT AF+ P+L HI +Q + PG D
Sbjct: 271 YIRKSEYSTPTPIQAQGVPIAMSGRDIIGIAKTGSGKTAAFIWPLLIHIMDQKDIKPG-D 329
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------G 215
P+GL+ APT EL + Q+ ++ G
Sbjct: 330 GPIGLICAPTRELSQQIHQECKKFGKAYNIHTVCAYGGGNMWEQTKACQAGCEILVATPG 389
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+IDL+ + K TNL RVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 390 RLIDLVKR---KATNLERVTFLVLDEADRMFDMGFEPQVRSIANHVRPDRQTLLFSATFR 446
Query: 276 PRVEILAR 283
+VE LAR
Sbjct: 447 KKVERLAR 454
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++ V+N+D D + + H ++ +K A+ +++++ +A D
Sbjct: 557 VATDVAARGLDIPSIKTVVNYDVARDIDTHTHRIGRTGRAGIKGTAYTLVTQKDVNFAGD 616
Query: 349 LVKAFE 354
LV+ E
Sbjct: 617 LVRNLE 622
>gi|339264885|ref|XP_003366432.1| Pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichinella
spiralis]
gi|316955987|gb|EFV46706.1| Pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Trichinella
spiralis]
Length = 261
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 113/198 (57%), Gaps = 52/198 (26%)
Query: 138 KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPV 197
K N+E P IQA A I+ G D + I +TGSGKTLAFL+PM RH+ +QPP+ D P+
Sbjct: 50 KYNYEKPTPIQAQAIPAILCGRDVIGIAKTGSGKTLAFLIPMFRHVLDQPPL-DDMDGPI 108
Query: 198 G------------LVMAPTGELVRQ------------------------------QVRRG 215
G L+M PT EL Q +++RG
Sbjct: 109 GNERPVQYCALVTLIMTPTRELAMQIAKECKKFSRPLNLSTVCVYGGTGISEQIAELKRG 168
Query: 216 ---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQ 266
RMID+L N K+TNL RVTYLVLDEADRMFDMGFEPQ+++I+ NIRPDRQ
Sbjct: 169 AEIIVCTPGRMIDMLAANNGKVTNLRRVTYLVLDEADRMFDMGFEPQVSKIIGNIRPDRQ 228
Query: 267 AVLFSPTFPPRVEILARK 284
V+FS TFP ++E LARK
Sbjct: 229 TVMFSATFPRQMEALARK 246
>gi|195069805|ref|XP_001997032.1| GH23229 [Drosophila grimshawi]
gi|193906224|gb|EDW05091.1| GH23229 [Drosophila grimshawi]
Length = 649
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 131/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ +NFYT +I ++ R+ L +K+ PKP+ ++ G ++L+
Sbjct: 246 EIEYEPFERNFYTPHEDIAQLDEDQVRELRRTLGVKVSGALPPKPVSSFGHFGFDDQLLK 305
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+ K + P IQA A +SG D + I +TGSGKT AF+ P+L H+ +Q + PG D
Sbjct: 306 SVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRELRPG-D 364
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 365 GPIGLILAPTRELSLQIYNEAKKFGKVYNINVVCCYGGGSKWEQSKALEQGCEIVVATPG 424
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 425 RMIDMV---KMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFK 481
Query: 276 PRVEILAR 283
R+E LAR
Sbjct: 482 KRIERLAR 489
>gi|357112553|ref|XP_003558073.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like
[Brachypodium distachyon]
Length = 767
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 148/283 (52%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y+ K+FY + I+ M+ Y K L +++ P+P+K + G ++
Sbjct: 169 IEYESFNKDFYEEKPSISGMNAEEVADYMKSLAIRVSGFDVPRPVKNFADCGFPVPLMNA 228
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K +E P IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 229 IAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEG 287
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 288 PIGVICAPTRELAHQIYLEAKKFAKPYNLQVAAVYGGVSKFDQFKELKAGCEIVVATPGR 347
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDLL +K + R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P
Sbjct: 348 LIDLLKMKALK---MFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPY 404
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + + I +V G ++++ V+N P+D E
Sbjct: 405 KVERLARE--ILSDPIRVTVGQVGSANEDIKQVVNV-LPSDAE 444
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+E L K+ ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 498 RMETLQNFKSGTYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 557
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ +A +LV + EL +L ++D
Sbjct: 558 GTAYTLITQKETRFAGELVHSLIAAGQDVPNELMDLAMKD 597
>gi|168021119|ref|XP_001763089.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685572|gb|EDQ71966.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 514
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 129/243 (53%), Gaps = 47/243 (19%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + ++ ++ AYR++ ++ + + PKP++T+ + +L K
Sbjct: 54 FEKNFYVEHPAVSALTEEEVAAYRRKREITVEGRTVPKPVRTFEEASFPDYVLHEVLKAG 113
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQA + + G D + + ETGSGKTLA+LLP + H+ QP + PG D P+ LV
Sbjct: 114 FTEPTAIQAQGWPMALKGRDLIGLAETGSGKTLAYLLPAIVHVNAQPYLAPG-DGPIVLV 172
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID+L
Sbjct: 173 LAPTRELAVQIQQESTKFGASSKIKNTCIYGGAPKGPQIRDLQKGVEVVIATPGRLIDML 232
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S T+P VE L
Sbjct: 233 EG---RHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPKEVEFL 289
Query: 282 ARK 284
AR+
Sbjct: 290 ARQ 292
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATDL 349
A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F + NA +A +L
Sbjct: 395 ATDVAARGLDVKDIKCVINYDFPGSCEDYVHRIGRTGRAGAKGAAYTFFTAANAKHAKEL 454
Query: 350 V 350
V
Sbjct: 455 V 455
>gi|345487283|ref|XP_001603249.2| PREDICTED: ATP-dependent RNA helicase DDX42-like [Nasonia
vitripennis]
Length = 793
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 161/333 (48%), Gaps = 49/333 (14%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I Y+ KNFY +I ++ RK L +K+ P P+ ++ G ++++
Sbjct: 210 IPYEPFEKNFYNVHEDIANLNKQQIDELRKTLGIKVTGPAPPNPVTSFGHFGFDDSLIKS 269
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K + P IQA + + +SG D + I +TGSGKT AF+ PML HI +Q + G D
Sbjct: 270 IRKHEYTQPTPIQAQSIPVALSGRDLIGIAKTGSGKTAAFVWPMLVHIMDQKELDSG-DG 328
Query: 196 PVGLVMAPTGELVRQQVRR---------------------------------------GR 216
P+GL++APT EL +Q GR
Sbjct: 329 PIGLILAPTRELSQQIYHEAKKFGKVYNIRVCCCYGGGSKWEQSKALESGAEIVVATPGR 388
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDL+ +K TNL+RVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 389 IIDLVK---MKATNLSRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFKK 445
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSCAFR 336
R+E LAR + I + +++ + P +++ +L S +
Sbjct: 446 RIEKLARDALTDPIRIVQGDVGEANTDVTQHVIVFYKNPTGKWTWLNQNIVEYLSSGSLL 505
Query: 337 -FISEE-NAIYATDLVKAFELSELVVRDDLKAV 367
F++++ NA + +K E L++ D+ V
Sbjct: 506 IFVTKKLNAEELANNLKLKEYEVLLLHGDMDQV 538
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I + K ++ +A V ARGLD + VIN+D D + + H ++ K A+
Sbjct: 544 ITSFKKKTVSILVATDVAARGLDIPHIRTVINYDVARDIDTHTHRIGRTGRAGEKGTAYT 603
Query: 337 FISEENAIYATDLVKAFE 354
++E++ +A LV+ E
Sbjct: 604 LVTEKDKEFAGHLVRNLE 621
>gi|5270|emb|CAA36873.1| p68 protein [Schizosaccharomyces pombe]
Length = 550
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 129/242 (53%), Gaps = 47/242 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + + S A YRK+ ++ + PKP+ T+ + G +L+ +L
Sbjct: 82 FQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLG 141
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
E P IQ A + +SG D V I+ TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 142 FEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPG-DGPIVLV 200
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL Q ++R GR++D+L
Sbjct: 201 LAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPLGPQILDLIRGVEICIATPGRLLDML 260
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
N TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ V+FS T+P V+ L
Sbjct: 261 DSNK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRL 317
Query: 282 AR 283
AR
Sbjct: 318 AR 319
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V +RG+D K + V N+D P + EDYVH ++ K A+ + +
Sbjct: 416 RTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTS 475
Query: 341 ENAIYATDLV 350
+NA A +LV
Sbjct: 476 DNAKQARELV 485
>gi|224134991|ref|XP_002327540.1| predicted protein [Populus trichocarpa]
gi|222836094|gb|EEE74515.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/269 (37%), Positives = 139/269 (51%), Gaps = 48/269 (17%)
Query: 61 RAKKKKRDKNREIIKSKIKID-YQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKC 115
R ++R+ R +K +D KNF+ ++ + MS YR + ++ + +
Sbjct: 26 RPSSERREHGRGDSPAKSDLDGLTPFEKNFHVESPSVAAMSERDVEEYRLRREITVEGRD 85
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP+K++ G +L+ SK P IQA + + G D + I ETGSGKTLA+
Sbjct: 86 VPKPVKSFHDVGFPDYVLQEISKAGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAY 145
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLP + H+ QP + PG D P+ LV+APT EL Q
Sbjct: 146 LLPAIIHVNAQPFLAPG-DGPIVLVLAPTRELAVQIQQEAAKFGASSRIKNTCIYGGVPK 204
Query: 211 --QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
QVR GR+ID++ + TNL RVTYLVLDEADRM DMGFEPQI +
Sbjct: 205 GPQVRDLQKGVEIVIATPGRLIDMMESHH---TNLRRVTYLVLDEADRMLDMGFEPQIRK 261
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARKT 285
IV IRPDRQ + +S T+P VE LAR++
Sbjct: 262 IVSQIRPDRQTLYWSATWPKEVEQLARQS 290
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 383 KAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA 442
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A +LV E + V +L A+A
Sbjct: 443 GNARFAKELVTILEEAGQKVSPELTAMA 470
>gi|6319714|ref|NP_009796.1| DEAD-box RNA helicase PRP5 [Saccharomyces cerevisiae S288c]
gi|130806|sp|P21372.1|PRP5_YEAST RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|172284|gb|AAA34914.1| PRP5 [Saccharomyces cerevisiae]
gi|536641|emb|CAA85200.1| PRP5 [Saccharomyces cerevisiae]
gi|51013085|gb|AAT92836.1| YBR237W [Saccharomyces cerevisiae]
gi|285810568|tpg|DAA07353.1| TPA: DEAD-box RNA helicase PRP5 [Saccharomyces cerevisiae S288c]
Length = 849
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 147/263 (55%), Gaps = 48/263 (18%)
Query: 85 LRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPIKTWRQTGLTTKILETFS-K 138
+KNFY ++ ++ MS ++L ++KI+ PKP+ W Q GL+T + + K
Sbjct: 214 FQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEK 273
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
L+ + IQ+ A I+SG D + I++TGSGKT+++LLP+LR + Q P+ + P+G
Sbjct: 274 LHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMG 333
Query: 199 LVMAPTGEL---VRQQVRR-------------------------------------GRMI 218
L++APT EL + ++V + GR I
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 219 DLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRV 278
D+L N K+ + R+T++V+DEADR+FD+GFEPQIT+I++ +RPD+Q VLFS TFP ++
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKL 453
Query: 279 EILARKTNVCNLSIANSVRARGL 301
A V + I+ ++ ++G+
Sbjct: 454 RSFA--VRVLHSPISITINSKGM 474
>gi|256272916|gb|EEU07884.1| Prp5p [Saccharomyces cerevisiae JAY291]
Length = 849
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 175/351 (49%), Gaps = 58/351 (16%)
Query: 7 KQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS----HSASDYELFMKRA 62
++ P IE DPLD FM ++ + + G L ED D ++
Sbjct: 126 QKAPEHDIEKDPLDEFMTSLKEEKMSNSKGMYDRGDILDVEDQLFELGGTDDEDVEDNTD 185
Query: 63 KKKKRDKNREIIKSKIKIDY------QQLRKNFYTQAREITRMSPAYRKQL-----DLKI 111
+ K ++K Y + +K FY ++ ++ MS ++L ++KI
Sbjct: 186 NSNIAKIAKLKAKKRVKQIYYSPEELEPFQKKFYIESETVSSMSEMEVEELRLSLDNIKI 245
Query: 112 REKCAPKPIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSG 170
+ PKP+ W Q GL+T + + KL+ + IQ+ A I+SG D + I++TGSG
Sbjct: 246 KGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSG 305
Query: 171 KTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR------------- 214
KT+++LLP+LR + Q P+ + P+GL++APT EL + ++V +
Sbjct: 306 KTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCC 365
Query: 215 ------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
GR ID+L N K+ + R+T++V+DEADR+FD+GF
Sbjct: 366 TGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGF 425
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
EPQIT+I++ +RPD+Q VLFS TFP ++ A V + I+ ++ ++G+
Sbjct: 426 EPQITQIMKTVRPDKQCVLFSATFPNKLRSFA--VRVLHSPISITINSKGM 474
>gi|349576612|dbj|GAA21783.1| K7_Prp5p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 849
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 172/343 (50%), Gaps = 58/343 (16%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS----HSASDYELFMKRAKKKKRDKN 70
E DPLD FM ++ + + G L ED D ++
Sbjct: 134 EKDPLDEFMTSLKEEKMSNSKGMYDRGDILDVEDQLFELGGTDDEDVEDNTDNSNIAKIA 193
Query: 71 REIIKSKIKIDY------QQLRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKP 119
+ K ++K Y + +KNFY ++ ++ MS ++L ++KI+ PKP
Sbjct: 194 KLKAKKRVKQIYYSPEELEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKP 253
Query: 120 IKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
+ W Q GL+T + + KL+ + IQ+ A I+SG D + I++TGSGKT+++LLP
Sbjct: 254 VTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLP 313
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR--------------------- 214
+LR + Q P+ + P+GL++APT EL + ++V +
Sbjct: 314 LLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKK 373
Query: 215 ----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
GR ID+L N K+ + R+T++V+DEADR+FD+GFEPQIT+I+
Sbjct: 374 QITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIM 433
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
+ +RPD+Q VLFS TFP ++ A V + I+ ++ ++G+
Sbjct: 434 KTVRPDKQCVLFSATFPNKLRSFA--VRVLHSPISITINSKGM 474
>gi|392594865|gb|EIW84189.1| RNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 447
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 130/243 (53%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
++ KNFY + + ++ MS +R+ ++KI + P+P+ ++ + G IL T
Sbjct: 62 ERFEKNFYVEDKRVSAMSDREIEEFRRTKEIKIHGRDVPRPVTSFDELGFPEYILSTIRA 121
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
NP IQ A + +SG D VAI +TGSGKT++F LP + HI QP + PG D P+
Sbjct: 122 QGFPNPTPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAPG-DGPIA 180
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
L++APT EL Q QVR GR+ID
Sbjct: 181 LILAPTRELAVQIQQECTKFGSTSRIRNTAIYGGAPKGPQVRDLTRGVEVVIATPGRLID 240
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 241 MLESGR---TNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQ 297
Query: 280 ILA 282
LA
Sbjct: 298 KLA 300
>gi|242041163|ref|XP_002467976.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
gi|241921830|gb|EER94974.1| hypothetical protein SORBIDRAFT_01g037410 [Sorghum bicolor]
Length = 766
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/283 (36%), Positives = 147/283 (51%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y K+FY + I+ MS Y K L +++ P+PIK ++ G ++
Sbjct: 174 IEYDAFTKDFYEEKPSISGMSDQEVADYMKSLAIRVSGFDVPRPIKNFQDCGFPVPLMNA 233
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K +E P IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 234 IAKQAYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEG 292
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 293 PIGVICAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEVVIATPGR 352
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDLL +K + R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P
Sbjct: 353 LIDLLKMKALK---MFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPY 409
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + I +V G ++++ V+N P+D E
Sbjct: 410 KVERLARE--ILTDPIRVTVGQVGGANEDIKQVVNV-LPSDVE 449
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+E L + K+ ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 503 RMETLQKFKSGTYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 562
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ A +A +LV + EL +L ++D
Sbjct: 563 GTAYTLITQKEARFAGELVHSLIAAGQDVPNELMDLAMKD 602
>gi|363749229|ref|XP_003644832.1| hypothetical protein Ecym_2269 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888465|gb|AET38015.1| Hypothetical protein Ecym_2269 [Eremothecium cymbalariae
DBVPG#7215]
Length = 877
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 167/338 (49%), Gaps = 57/338 (16%)
Query: 58 FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLDLKIREKCA- 116
F++ AK K R + + + SK D + KN Y + EI M+ L L +
Sbjct: 231 FVRIAKIKARKQLKTVHYSKA--DLEPFVKNLYHEPEEICLMTDEEMADLRLSLDNTTVK 288
Query: 117 ----PKPIKTWRQTGLTTKILETFSKLNHEN-PVAIQAPASALIISGLDSVAITETGSGK 171
P PI W GLT+ +++ K N P IQ+ A I+SG D + I++TGSGK
Sbjct: 289 GLNCPGPITKWTHLGLTSDVMDLLVKEFQFNFPTPIQSQAIPAIMSGRDIIGISKTGSGK 348
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------- 210
T++FLLP+LR I Q P+ G+ P+GL++APT EL Q
Sbjct: 349 TVSFLLPLLRQIKSQRPLRVGETGPIGLLLAPTRELAVQIHEEVVKFTAANPRIKSICCT 408
Query: 211 ----------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFE 251
++R GR IDLL N + N R+ ++VLDEADR+FD+GFE
Sbjct: 409 GGSEIKKQINDIKRGIEIIVATPGRFIDLLSLNSGNLVNPKRIVFVVLDEADRLFDLGFE 468
Query: 252 PQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVIN 311
PQ+ +I++ IRPD+Q VLFS TFP +++ A K + + I ++ ++ L + +E +
Sbjct: 469 PQVNQIMKCIRPDKQCVLFSATFPTKLKSFASK--ILHNPIHITINSKSLINENIEQRVE 526
Query: 312 F--DAPNDYEDYVHHCCQSWLKSCAFRFISEENAIYAT 347
D + ++ +H WL R + E+ I+ +
Sbjct: 527 IFGDEESKFKSLLH-----WLVPTQTREVDEKTIIFVS 559
>gi|449458179|ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
sativus]
gi|449476660|ref|XP_004154799.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
sativus]
Length = 505
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 130/244 (53%), Gaps = 47/244 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY +A + M+ YR++ ++ + + PKP+K++R G +++ +K
Sbjct: 58 HFEKNFYIEAPSVAAMTEREVEEYRQRREITVEGRDVPKPVKSFRDVGFPDYVMQEIAKA 117
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PG D P+ L
Sbjct: 118 GFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPG-DGPIVL 176
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q QVR GR+ID+
Sbjct: 177 VLAPTRELAVQIQQEATKFGASSKIKNTCVYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 236
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
+ + TNL RVTYLVLDEADRM DMGF+PQI +IV IRPDRQ + +S T+P VE
Sbjct: 237 MESHH---TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSATWPKEVEQ 293
Query: 281 LARK 284
LAR+
Sbjct: 294 LARQ 297
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATDL 349
A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F + NA +A +L
Sbjct: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTAANARFAKEL 459
Query: 350 VKAFELSELVVRDDLKAVA 368
+ E + V +L A+
Sbjct: 460 IGILEEAGQKVSPELAAMG 478
>gi|399217255|emb|CCF73942.1| unnamed protein product [Babesia microti strain RI]
Length = 530
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 149/299 (49%), Gaps = 55/299 (18%)
Query: 34 PNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQ-----LRKN 88
PN+ GR + D H Y + R + RD + + +D++ KN
Sbjct: 25 PNDNASYGRNYSSHD-HGGRSYGGYNVR-RSYNRDSSSNLGGRLTIVDWKSENLVPFEKN 82
Query: 89 FYTQAREITRMS----PAYRKQLDLKI-REKCAPKPIKTWRQTGLTTKILETFSKLNHEN 143
FY + +I+ M+ +R+ ++ I K PKP+ ++ + +L+ ++
Sbjct: 83 FYVEHPKISAMTHQRVEEFRRLKEIIIISGKDVPKPVTSFEYSSFPNYLLDALKQVGFTE 142
Query: 144 PVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAP 203
P AIQA + +SG D + I ETGSGKTLAFLLP + HI Q + PG D P+ LV+AP
Sbjct: 143 PTAIQAQGWPIALSGRDMIGIAETGSGKTLAFLLPSIVHINAQQLLRPG-DGPIVLVLAP 201
Query: 204 TGELVRQ------------------------------QVRR---------GRMIDLLCKN 224
T ELV Q +RR GR+ID L N
Sbjct: 202 TRELVEQIRNECNKFGHSSRIKNTVAYGGVPKRSQIADLRRGVEILLACPGRLIDFLESN 261
Query: 225 GVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
+TNL RVTYLVLDEADRM DMGFEPQI IV IRPDRQ +++S T+P V+ LAR
Sbjct: 262 ---VTNLRRVTYLVLDEADRMLDMGFEPQIRSIVGQIRPDRQTLMWSATWPKEVQALAR 317
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYA 346
+ IA V +RGLD K++ VIN+D PN EDYVH ++ K A+ F++ + A
Sbjct: 419 IMIATDVASRGLDVKDVRFVINYDFPNQIEDYVHRIGRTGRAGTKGVAYTFLTPDKHKVA 478
Query: 347 TDLVKAFELSELVVRDDLKAVA 368
DLVK + + +L +A
Sbjct: 479 KDLVKILREANQPISPELSRIA 500
>gi|363753554|ref|XP_003646993.1| hypothetical protein Ecym_5422 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890629|gb|AET40176.1| hypothetical protein Ecym_5422 [Eremothecium cymbalariae
DBVPG#7215]
Length = 560
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 138/262 (52%), Gaps = 54/262 (20%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++ MS A +RK+ ++ I PKPI+T+ + G +L+ +
Sbjct: 82 RFEKNFYVEHEDVRNMSSADVEDFRKKSEMTIIGHDVPKPIRTFDEAGFPEYVLKEVKEE 141
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P AIQ + +SG D + + TGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 142 GFDKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPIVL 200
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR+ID+
Sbjct: 201 VLAPTRELAVQIQKECSKFGHSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDM 260
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 261 L---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQ 317
Query: 281 LAR-------KTNVCNLSIANS 295
LAR + N+ +L +A S
Sbjct: 318 LARDYLHDPIQVNIGSLELAAS 339
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARG+D K + VIN+D P + EDYVH ++ A F +E++
Sbjct: 423 IMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQSKALG 482
Query: 347 TDLVKAFELSELVVRDDL 364
L+ ++ + DL
Sbjct: 483 AQLISIMREAKQEIPQDL 500
>gi|226506900|ref|NP_001142117.1| uncharacterized protein LOC100274281 [Zea mays]
gi|194704910|gb|ACF86539.1| unknown [Zea mays]
gi|194707190|gb|ACF87679.1| unknown [Zea mays]
gi|414875847|tpg|DAA52978.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 494
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 130/243 (53%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY ++ + M+ AYR++ ++ + + PKP++ +R G +L+ +K
Sbjct: 50 RFEKNFYVESPAVAGMTEEEVEAYRRRREITVDGRDVPKPVREFRDVGFPEYVLQEITKA 109
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PG D P+ L
Sbjct: 110 GFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILSPG-DGPIVL 168
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q QVR GR+ID+
Sbjct: 169 VLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 228
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
+ + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S T+P VE
Sbjct: 229 IESHH---TNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQ 285
Query: 281 LAR 283
LAR
Sbjct: 286 LAR 288
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 383 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA 442
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A +L+ E + V +L A+
Sbjct: 443 ANARFAKELINILEEAGQKVSSELAAMG 470
>gi|189520693|ref|XP_001923830.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Danio rerio]
Length = 671
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 131/252 (51%), Gaps = 50/252 (19%)
Query: 77 KIKIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLT 129
K K D QL KNFY + E+ MS YR++ ++ +R PKP+ + Q
Sbjct: 44 KKKWDLDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFP 103
Query: 130 TKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPV 189
+++ + N + P AIQA L +SG D V I +TGSGKTLA+LLP + HI QP +
Sbjct: 104 QYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 163
Query: 190 VPGDDSPVGLVMAPTGELVRQ---------------------------QVRR-------- 214
G D P+ LV+APT EL +Q Q+R
Sbjct: 164 ERG-DGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEIC 222
Query: 215 ----GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLF 270
GR+ID L V TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++
Sbjct: 223 IATPGRLIDFL---EVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW 279
Query: 271 SPTFPPRVEILA 282
S T+P V LA
Sbjct: 280 SATWPKEVRQLA 291
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A D
Sbjct: 397 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARD 456
Query: 349 LVKAFELSELVVRDDLKAVADS 370
LV+ E + + L + D+
Sbjct: 457 LVRVLEEARQAINPKLLQLVDT 478
>gi|141796059|gb|AAI34864.1| LOC556764 protein [Danio rerio]
Length = 519
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 132/252 (52%), Gaps = 50/252 (19%)
Query: 77 KIKIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLT 129
K K D QL KNFY + E+ MS YR++ ++ +R PKP+ ++ Q
Sbjct: 44 KKKWDLDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTSFHQAQFP 103
Query: 130 TKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPV 189
+++ + N + P AIQA L +SG D V I +TGSGKTLA+LLP + HI QP +
Sbjct: 104 QYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 163
Query: 190 VPGDDSPVGLVMAPTGELVRQ---------------------------QVRR-------- 214
G D P+ LV+APT EL +Q Q+R
Sbjct: 164 ERG-DGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEIC 222
Query: 215 ----GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLF 270
GR+ID L V TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++
Sbjct: 223 IATPGRLIDFL---EVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW 279
Query: 271 SPTFPPRVEILA 282
S T+P V LA
Sbjct: 280 SATWPKEVRQLA 291
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A D
Sbjct: 397 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARD 456
Query: 349 LVKAFELSELVVRDDLKAVADS 370
LV+ E + + L + D+
Sbjct: 457 LVRVLEEARQAINPKLLQLVDT 478
>gi|296201782|ref|XP_002748184.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Callithrix jacchus]
Length = 934
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|301778305|ref|XP_002924562.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Ailuropoda
melanoleuca]
Length = 935
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|403303756|ref|XP_003942489.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403303758|ref|XP_003942490.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 933
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|133777033|gb|AAH43036.4| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Mus musculus]
Length = 810
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 88 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 147
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 148 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 206
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 207 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 266
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 267 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 323
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 324 KKIEKLAR 331
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 434 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 493
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 494 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 544
>gi|385301732|gb|EIF45901.1| rna helicase [Dekkera bruxellensis AWRI1499]
Length = 537
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 137/262 (52%), Gaps = 54/262 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + EI +MS +RK ++KI P+PI+T+ Q G +L ++
Sbjct: 67 KFEKNFYKEDPEIAKMSDEQIEKFRKDNEMKIFGNDVPRPIETFDQAGFPDYVLSEVKEM 126
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P IQ + +SG D V I TGSGKTLA+ LP + HI QP + G D P+ L
Sbjct: 127 GFEKPTGIQCQGWPMALSGRDMVGIASTGSGKTLAYTLPAIVHINAQPLLQQG-DGPIVL 185
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR++D+
Sbjct: 186 ILAPTRELAVQIQQECGKFGHTSRIRNTCVYGGVPRGPQIRALSRGVEICIATPGRLLDM 245
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L G K TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 246 L--EGRK-TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKSVQS 302
Query: 281 LAR-------KTNVCNLSIANS 295
LAR + N+ +L ++ S
Sbjct: 303 LARDYLKDYIQVNIGSLELSAS 324
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V ARG+D K++ VIN+D P + EDYVH ++ K A F +
Sbjct: 402 RTGKSPIMVATDVAARGIDVKDVTAVINYDMPGNVEDYVHRIGRTGRAGAKGTAVTFFTR 461
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAV 367
+N+ A DL+ ++ V ++L+A+
Sbjct: 462 DNSHQAHDLIVVLREAKQEVPEELQAM 488
>gi|281351661|gb|EFB27245.1| hypothetical protein PANDA_013938 [Ailuropoda melanoleuca]
Length = 940
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 212 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 271
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 272 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 330
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 331 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 390
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 391 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 447
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 448 KKIEKLAR 455
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 558 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 617
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 618 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 668
>gi|431908881|gb|ELK12473.1| ATP-dependent RNA helicase DDX42 [Pteropus alecto]
Length = 927
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 198 EIDYPPFEKNFYNEHEEITSLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 257
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 258 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 316
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 317 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 376
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 377 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 433
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 434 KKIEKLAR 441
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 544 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 603
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 604 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 654
>gi|242051719|ref|XP_002455005.1| hypothetical protein SORBIDRAFT_03g002860 [Sorghum bicolor]
gi|241926980|gb|EES00125.1| hypothetical protein SORBIDRAFT_03g002860 [Sorghum bicolor]
Length = 488
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 129/243 (53%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY ++ + M+ AYR++ ++ + + PKP+ +R G +L+ +K
Sbjct: 50 RFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVLEFRDVGFPEYVLQEITKA 109
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PG D P+ L
Sbjct: 110 GFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPG-DGPIVL 168
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q QVR GR+ID+
Sbjct: 169 VLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 228
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
+ + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S T+P VE
Sbjct: 229 IESHH---TNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQ 285
Query: 281 LAR 283
LAR
Sbjct: 286 LAR 288
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGL ++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 383 KSGKSPIMTATDVAARGL----VKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYSFFTA 438
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A +L+ E + V +L A+
Sbjct: 439 ANARFAKELISILEEAGQKVSSELAAMG 466
>gi|291406357|ref|XP_002719521.1| PREDICTED: DEAD box polypeptide 42 protein [Oryctolagus cuniculus]
Length = 935
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|74152734|dbj|BAE42635.1| unnamed protein product [Mus musculus]
Length = 929
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|157838001|ref|NP_082350.3| ATP-dependent RNA helicase DDX42 [Mus musculus]
gi|123796460|sp|Q810A7.3|DDX42_MOUSE RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|74146847|dbj|BAE41388.1| unnamed protein product [Mus musculus]
Length = 929
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|26340024|dbj|BAC33675.1| unnamed protein product [Mus musculus]
Length = 810
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 88 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 147
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 148 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 206
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 207 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 266
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 267 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 323
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 324 KKIEKLAR 331
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 434 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 493
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 494 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 544
>gi|351704433|gb|EHB07352.1| ATP-dependent RNA helicase DDX42 [Heterocephalus glaber]
Length = 935
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 208 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 267
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 268 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 326
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 327 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 386
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 387 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 443
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 444 KKIEKLAR 451
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 554 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 613
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 614 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 664
>gi|332243110|ref|XP_003270725.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Nomascus leucogenys]
Length = 938
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|15930131|gb|AAH15505.1| DDX42 protein [Homo sapiens]
gi|23336904|tpg|DAA00077.1| TPA_exp: SF3b125 DEAD-box protein [Homo sapiens]
gi|158259277|dbj|BAF85597.1| unnamed protein product [Homo sapiens]
Length = 819
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 88 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 147
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 148 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 206
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 207 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 266
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 267 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 323
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 324 KKIEKLAR 331
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 434 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 493
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 494 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 544
>gi|402900734|ref|XP_003913323.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Papio
anubis]
gi|402900736|ref|XP_003913324.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Papio
anubis]
Length = 937
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|156391127|ref|XP_001635620.1| predicted protein [Nematostella vectensis]
gi|156222716|gb|EDO43557.1| predicted protein [Nematostella vectensis]
Length = 518
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/248 (39%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY+ KNFY + EIT+ S RK++ +K+ +P ++ G +++
Sbjct: 60 EIDYKPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMA 119
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+ KL + P IQ A + +SG D + I +TGSGKT AFL P L HI +QP + G D
Sbjct: 120 SIRKLEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWPALVHIMDQPELQVG-D 178
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ L+ APT EL +Q + RR G
Sbjct: 179 GPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKYEQSKALQEGAEIVVATPG 238
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K TNL RVTYLV DEADRMFDMGFEPQ+ I N+RPDRQ +LFS TF
Sbjct: 239 RLIDHV---KAKATNLHRVTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQTLLFSATFK 295
Query: 276 PRVEILAR 283
+VE L R
Sbjct: 296 KKVEHLCR 303
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + H ++ K A+ +++ + +A D
Sbjct: 406 VATDVAARGLDIPSIKTVINYDVARDITTHTHRIGRTGRAGEKGNAYTLLTQSDQNFAGD 465
Query: 349 LVKAFELSELVVRDDLKAVA 368
LV+ E++ VV + L A+A
Sbjct: 466 LVRNLEIANQVVPESLMALA 485
>gi|417405318|gb|JAA49373.1| Putative rna helicase [Desmodus rotundus]
Length = 933
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|330792086|ref|XP_003284121.1| hypothetical protein DICPUDRAFT_27074 [Dictyostelium purpureum]
gi|325085935|gb|EGC39333.1| hypothetical protein DICPUDRAFT_27074 [Dictyostelium purpureum]
Length = 593
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 129/243 (53%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q+ KNFY + E+TR S +R+ + ++ + PKPI + Q +++
Sbjct: 177 QRFEKNFYHENEELTRTSDEEIEEFRESCMMTVKGRDIPKPIIHFNQAPFPNYLMKEIMA 236
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
NP IQ+ A + + G D + + +TGSGKTLAFLLP + HI QP + PG D P+
Sbjct: 237 AGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPTLKPG-DGPIV 295
Query: 199 LVMAPTGEL---VRQQVRR------------------------------------GRMID 219
LV+APT EL +++Q R+ GR+ID
Sbjct: 296 LVLAPTRELALQIQEQARKFGGTSQISNVCVYGGASKHSQVMMLKKGVEIVIATPGRLID 355
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++FS T+P V+
Sbjct: 356 ILTSGD---TNLRRVTYLVLDEADRMLDMGFEPQIRKILSQIRPDRQTLMFSATWPKEVQ 412
Query: 280 ILA 282
LA
Sbjct: 413 SLA 415
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 275 PPRVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWL 330
P R +L++ K + + IA + +RGLD K+++ V+N+D PN E YVH ++
Sbjct: 502 PERDFVLSQFKNGIFPIMIATDLASRGLDVKDIKFVVNYDFPNTIETYVHRIGRTARAGA 561
Query: 331 KSCAFRFISEENAIYATDLVKAFELSE 357
+ F++ ENA A DL+K LSE
Sbjct: 562 TGTSISFLTRENARLANDLIKV--LSE 586
>gi|387763217|ref|NP_001248484.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|355568823|gb|EHH25104.1| hypothetical protein EGK_08866 [Macaca mulatta]
gi|355754284|gb|EHH58249.1| hypothetical protein EGM_08053 [Macaca fascicularis]
gi|380809324|gb|AFE76537.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|383415577|gb|AFH31002.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
gi|384945118|gb|AFI36164.1| ATP-dependent RNA helicase DDX42 [Macaca mulatta]
Length = 937
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|345804940|ref|XP_537598.3| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
isoform 1 [Canis lupus familiaris]
Length = 934
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|354479437|ref|XP_003501916.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Cricetulus griseus]
gi|344243071|gb|EGV99174.1| ATP-dependent RNA helicase DDX42 [Cricetulus griseus]
Length = 928
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 206 EIDYPPFEKNFYNEHEEITSLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 265
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 266 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 324
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 325 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 384
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 385 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 441
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 442 KKIEKLAR 449
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 552 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 611
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 612 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 662
>gi|51258614|gb|AAH78667.1| DDX42 protein, partial [Homo sapiens]
Length = 919
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 188 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 247
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 248 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 306
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 307 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 366
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 367 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 423
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 424 KKIEKLAR 431
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 534 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 593
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 594 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 644
>gi|45446743|ref|NP_031398.2| ATP-dependent RNA helicase DDX42 [Homo sapiens]
gi|45446747|ref|NP_987095.1| ATP-dependent RNA helicase DDX42 [Homo sapiens]
gi|74750541|sp|Q86XP3.1|DDX42_HUMAN RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42; AltName: Full=RNA helicase-like protein;
Short=RHELP; AltName: Full=RNA helicase-related protein;
Short=RNAHP; AltName: Full=SF3b DEAD box protein;
AltName: Full=Splicing factor 3B-associated 125 kDa
protein; Short=SF3b125
gi|29420431|dbj|BAC66466.1| RNA helicase-related protein [Homo sapiens]
gi|62205357|gb|AAH93081.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Homo sapiens]
gi|119614683|gb|EAW94277.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_b [Homo
sapiens]
gi|168277556|dbj|BAG10756.1| ATP-dependent RNA helicase DDX42 [synthetic construct]
Length = 938
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|357454677|ref|XP_003597619.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|358344685|ref|XP_003636418.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|124360402|gb|ABN08415.1| Helicase, C-terminal [Medicago truncatula]
gi|355486667|gb|AES67870.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355502353|gb|AES83556.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 499
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 132/252 (52%), Gaps = 48/252 (19%)
Query: 77 KIKID-YQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
KI +D KNFY+++ + M+ A YR + ++ + K PKP+K++
Sbjct: 46 KINLDGLPHFEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDY 105
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
+LE K P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + P
Sbjct: 106 VLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDP 165
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ LV+APT EL Q QVR
Sbjct: 166 G-DGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIA 224
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L N TNL RVTYLVLDEADRM DMGF+PQI +IV IRPDRQ + +S
Sbjct: 225 TPGRLIDMLESNH---TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSQIRPDRQTLYWSA 281
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 282 TWPKEVEQLARQ 293
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 387 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA 446
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A +L+ E + V +L A+
Sbjct: 447 ANARFAKELISILEEAGQRVSSELAAMG 474
>gi|148702332|gb|EDL34279.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_a [Mus
musculus]
Length = 927
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 205 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 264
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 265 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 323
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 324 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 383
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 384 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 440
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 441 KKIEKLAR 448
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 551 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 610
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 611 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 661
>gi|410981498|ref|XP_003997105.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Felis catus]
Length = 934
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|194216767|ref|XP_001501051.2| PREDICTED: ATP-dependent RNA helicase DDX42 [Equus caballus]
Length = 935
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|119614684|gb|EAW94278.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_c [Homo
sapiens]
Length = 936
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 205 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 264
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 265 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 323
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 324 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 383
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 384 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 440
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 441 KKIEKLAR 448
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 551 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 610
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 611 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 661
>gi|395826079|ref|XP_003786247.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Otolemur garnettii]
Length = 936
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|426347141|ref|XP_004041217.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Gorilla
gorilla gorilla]
gi|426347143|ref|XP_004041218.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Gorilla
gorilla gorilla]
Length = 938
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|195441137|ref|XP_002068383.1| GK13754 [Drosophila willistoni]
gi|194164468|gb|EDW79369.1| GK13754 [Drosophila willistoni]
Length = 839
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 141/265 (53%), Gaps = 47/265 (17%)
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAP 117
A KK+D + + +I+Y+ KNFY + EI+ +S R L +K+ P
Sbjct: 238 APPKKKDIDPLPMIYHSEIEYEPFEKNFYVEHEEISALSDEQVRDLRNTLGVKVSGPSPP 297
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
KP+ ++ G ++++ K + P +IQA A ++G D + I +TGSGKT AF+
Sbjct: 298 KPVTSFGHFGFDDQLIKAVRKAEYTQPTSIQAQAVPCALAGRDIIGIAKTGSGKTAAFIW 357
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR-------------------- 214
P+L H+ +Q + G + P+GL++APT EL + + +R
Sbjct: 358 PLLMHLMDQRELKAG-EGPIGLILAPTRELSLQIYNEAKRFGKVYNLRVVCCYGGGSKWE 416
Query: 215 ----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
GRMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I
Sbjct: 417 QSKALEQGAEIIVATPGRMIDMV---KMKATNLRRVTFLVLDEADRMFHMGFEPQVRSIC 473
Query: 259 QNIRPDRQAVLFSPTFPPRVEILAR 283
Q++RPDRQ +LFS TF R+E LAR
Sbjct: 474 QHVRPDRQTLLFSATFKRRIERLAR 498
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K C++ IA V ARGLD + V+N+D D + + H ++ K A
Sbjct: 589 IMQFKRKECDILIATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAHT 648
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVA 368
++E++ +A LV+ E ++ V DL +A
Sbjct: 649 LVTEKDKEFAGHLVRNLEGADQPVPSDLLELA 680
>gi|114669830|ref|XP_001147818.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 7 [Pan
troglodytes]
gi|114669832|ref|XP_001147880.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 8 [Pan
troglodytes]
gi|397480220|ref|XP_003811385.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 1 [Pan
paniscus]
gi|397480222|ref|XP_003811386.1| PREDICTED: ATP-dependent RNA helicase DDX42 isoform 2 [Pan
paniscus]
gi|410223570|gb|JAA09004.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410223572|gb|JAA09005.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410254498|gb|JAA15216.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410294570|gb|JAA25885.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410294572|gb|JAA25886.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410338913|gb|JAA38403.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
gi|410338915|gb|JAA38404.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 [Pan troglodytes]
Length = 938
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|108742054|gb|AAI17661.1| LOC556764 protein [Danio rerio]
Length = 519
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 131/252 (51%), Gaps = 50/252 (19%)
Query: 77 KIKIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLT 129
K K D QL KNFY + E+ MS YR++ ++ +R PKP+ + Q
Sbjct: 44 KKKWDLDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFP 103
Query: 130 TKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPV 189
+++ + N + P AIQA L +SG D V I +TGSGKTLA+LLP + HI QP +
Sbjct: 104 QYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 163
Query: 190 VPGDDSPVGLVMAPTGELVRQ---------------------------QVRR-------- 214
G D P+ LV+APT EL +Q Q+R
Sbjct: 164 ERG-DGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEIC 222
Query: 215 ----GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLF 270
GR+ID L V TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++
Sbjct: 223 IATPGRLIDFL---EVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW 279
Query: 271 SPTFPPRVEILA 282
S T+P V LA
Sbjct: 280 SATWPKEVRQLA 291
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A D
Sbjct: 397 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARD 456
Query: 349 LVKAFELSELVVRDDLKAVADS 370
LV+ E + + L + D+
Sbjct: 457 LVRVLEEARQAINPKLLQLVDT 478
>gi|193573502|ref|XP_001943796.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Acyrthosiphon
pisum]
Length = 737
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 141/264 (53%), Gaps = 49/264 (18%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPK 118
KKK+ D I S IK Y+ KNFYT EI+ ++ RK L L++ P
Sbjct: 182 KKKEIDPLPPIDHSLIK--YKSFEKNFYTPHNEISSLTVDKVIQLRKTLGLRVNGADLPY 239
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ ++ +++ K ++ P IQ+ A ++G D + I +TGSGKTLAF+ P
Sbjct: 240 PVTSFAHFNFDDALMKIIRKSDYVQPTPIQSQAVPAALAGRDIIGIAKTGSGKTLAFIWP 299
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---QVRR--------------------- 214
ML HI +QP + G D PVGL++APT EL +Q + ++
Sbjct: 300 MLVHIMDQPELKEG-DGPVGLILAPTRELSQQIYVEAKKFGKIYNLRVVCCYGGGSKWEQ 358
Query: 215 ---------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
GR+IDL+ + TNLTRVT+LVLDEADRMF+MGFEPQ+ I
Sbjct: 359 SKALEGGAEIIVGTPGRVIDLV---KMSATNLTRVTFLVLDEADRMFNMGFEPQVRSICD 415
Query: 260 NIRPDRQAVLFSPTFPPRVEILAR 283
++RPDRQ +LFS TF ++E LAR
Sbjct: 416 HVRPDRQTLLFSATFKKKIEKLAR 439
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K N+ +A V ARGLD + V+N+D D + + H ++ K AF ++
Sbjct: 533 KKQEVNIMVATDVAARGLDIAHIRTVVNYDIARDIDTHTHRIGRTGRAGEKGTAFTLVTP 592
Query: 341 ENAIYATDLVKAFE 354
++ +A LV++ E
Sbjct: 593 KDHEFAGHLVRSLE 606
>gi|326524209|dbj|BAJ97115.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 764
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 147/283 (51%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y+ K+FY + ++ MS Y K L +++ P+P+K + G ++
Sbjct: 169 IEYEPFTKDFYEEKPSVSGMSVEEVADYMKSLAIRVSGFDVPRPVKNFEDCGFPVPLMNA 228
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K +E P IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 229 IAKQGYEKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LQKEEG 287
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 288 PIGVICAPTRELAHQIYLEAKKFAKPYNLQVAAVYGGVSKFEQFKELKSGCEIVVATPGR 347
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDLL +K + R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P
Sbjct: 348 LIDLL---KMKALRMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPY 404
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + I +V G ++++ V+N P+D E
Sbjct: 405 KVERLARE--ILTDPIRVTVGQVGSANEDIKQVVNV-LPSDAE 444
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+E L + K+ + ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 498 RMETLQKFKSGIYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 557
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ + +A +LV + EL +L ++D
Sbjct: 558 GTAYTLITQKESRFAGELVHSLIAAGQDVPNELMDLAMKD 597
>gi|157817897|ref|NP_001100529.1| ATP-dependent RNA helicase DDX42 [Rattus norvegicus]
gi|149054552|gb|EDM06369.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42 (predicted) [Rattus
norvegicus]
Length = 929
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|388852229|emb|CCF54040.1| probable RNA helicase dbp2 (DEAD box protein) [Ustilago hordei]
Length = 564
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 127/246 (51%), Gaps = 47/246 (19%)
Query: 80 IDYQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
+D KNFY + A R YR + I+ + PKP+ ++ + G IL
Sbjct: 97 VDLVTFEKNFYIEDPRVAARSEREVQEYRASKQMTIQGQNVPKPVTSFDEAGFPDYILSE 156
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K+ P AIQ+ A + +SG D VAI ETGSGKT+ F LP + HI QP + PG D
Sbjct: 157 IKKMGFAEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMVHINAQPLLKPG-DG 215
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+ L++APT EL Q Q+R GR
Sbjct: 216 PIALILAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKGPQIRDLQRGAEICIATPGR 275
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID++ TNL RVTYLV+DEADRM DMGFEPQI +I+Q IRPDRQ ++FS T+P
Sbjct: 276 LIDMVDAGK---TNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPK 332
Query: 277 RVEILA 282
V+ LA
Sbjct: 333 EVQRLA 338
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHH---CCQSWLKSCAFRFISE 340
K+ + +A +V +RGLD K++ VIN+D P + EDYVH ++ A+ + +
Sbjct: 435 KSGRSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTP 494
Query: 341 ENAIYATDLV 350
EN+ A +L+
Sbjct: 495 ENSKSARELI 504
>gi|395532890|ref|XP_003768499.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Sarcophilus harrisii]
Length = 943
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITSLTPQQVIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELDPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNMEGANQHVTKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|344285247|ref|XP_003414374.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Loxodonta africana]
Length = 934
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|159154994|gb|AAI54494.1| LOC556764 protein [Danio rerio]
Length = 519
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 131/252 (51%), Gaps = 50/252 (19%)
Query: 77 KIKIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLT 129
K K D QL KNFY + E+ MS YR++ ++ +R PKP+ + Q
Sbjct: 44 KKKWDLDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKREITVRGSGCPKPVTNFHQAQFP 103
Query: 130 TKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPV 189
+++ + N + P AIQA L +SG D V I +TGSGKTLA+LLP + HI QP +
Sbjct: 104 QYVIDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYL 163
Query: 190 VPGDDSPVGLVMAPTGELVRQ---------------------------QVRR-------- 214
G D P+ LV+APT EL +Q Q+R
Sbjct: 164 ERG-DGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEIC 222
Query: 215 ----GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLF 270
GR+ID L V TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++
Sbjct: 223 IATPGRLIDFL---EVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMW 279
Query: 271 SPTFPPRVEILA 282
S T+P V LA
Sbjct: 280 SATWPKEVRQLA 291
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A D
Sbjct: 397 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARD 456
Query: 349 LVKAFELSELVVRDDLKAVADS 370
LV+ E + + L + D+
Sbjct: 457 LVRVLEEARQAINPKLLQLVDT 478
>gi|334322878|ref|XP_003340311.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Monodelphis
domestica]
Length = 730
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPAY----RKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITSLTPQQVIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELDPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
>gi|148702333|gb|EDL34280.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_b [Mus
musculus]
Length = 1012
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 290 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 349
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 350 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 408
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 409 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 468
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 469 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 525
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 526 KKIEKLAR 533
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 636 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 695
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 696 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 746
>gi|91206542|sp|Q4PHU9.2|DBP2_USTMA RecName: Full=ATP-dependent RNA helicase DBP2
Length = 552
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 142/275 (51%), Gaps = 50/275 (18%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + ++ S + YR + I+ + PKP+ ++ + G IL K+
Sbjct: 90 FEKNFYVEDPRVSNRSDSEVQQYRASKQMTIQGQNVPKPVTSFDEAGFPDYILSEIKKMG 149
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQ+ A + +SG D VAI ETGSGKT+ F LP + HI QP + PG D P+ L+
Sbjct: 150 FSEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMVHINAQPLLKPG-DGPIALI 208
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID++
Sbjct: 209 LAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKGPQIRDLQRGAEICIATPGRLIDMV 268
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
TNL RVTYLV+DEADRM DMGFEPQI +I+Q IRPDRQ ++FS T+P V+ L
Sbjct: 269 DAGK---TNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPKEVQRL 325
Query: 282 ARK--TNVCNLSIANSVRARGLDEKE-LELVINFD 313
A N ++I ++ A + K+ +E+ F+
Sbjct: 326 AGDFLNNYAQVNIGSTELAANHNVKQIIEVCTEFE 360
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHH---CCQSWLKSCAFRFISE 340
K+ + +A +V +RGLD K++ VIN+D P + EDYVH ++ A+ + +
Sbjct: 423 KSGRSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTP 482
Query: 341 ENAIYATDLV 350
EN+ A +L+
Sbjct: 483 ENSKSARELI 492
>gi|426238255|ref|XP_004013070.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Ovis aries]
Length = 948
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|119614682|gb|EAW94276.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 42, isoform CRA_a [Homo
sapiens]
Length = 828
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 97 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 156
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 157 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 215
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 216 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 275
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 276 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 332
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 333 KKIEKLAR 340
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 443 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 502
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 503 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 553
>gi|358417495|ref|XP_003583658.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
[Bos taurus]
gi|359077050|ref|XP_003587506.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX42
[Bos taurus]
Length = 947
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|432871593|ref|XP_004071991.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Oryzias
latipes]
Length = 610
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 135/250 (54%), Gaps = 50/250 (20%)
Query: 79 KIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D QL KNFY++ E+ RMS +R++ ++ +R PKP+ ++ Q
Sbjct: 44 KWDLDQLPKFEKNFYSEHAEVERMSQFDVEEFRRKKEITVRGSGCPKPLTSFHQAQFPQY 103
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
+++ + N + P AIQA L +SG D V I +TGSGKTLA+LLP + HI QP +
Sbjct: 104 VIDVLMQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLDR 163
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ LV+APT EL +Q Q+R
Sbjct: 164 G-DGPICLVLAPTRELAQQVQQVACDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIA 222
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S
Sbjct: 223 TPGRLIDFL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSA 279
Query: 273 TFPPRVEILA 282
T+P V LA
Sbjct: 280 TWPKEVRQLA 289
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S K A+ F + N A +
Sbjct: 395 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTNKGTAYTFFTPGNVRQARE 454
Query: 349 LVKAFE 354
LV+ E
Sbjct: 455 LVRVLE 460
>gi|312373386|gb|EFR21141.1| hypothetical protein AND_17503 [Anopheles darlingi]
Length = 615
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 127/247 (51%), Gaps = 47/247 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
IDY + KNFY +I + R L +K+ P P+ ++ G +++
Sbjct: 46 IDYAKFEKNFYIPHEDIVNLPYGKIQELRNTLGVKVSGPSPPNPVTSFAHFGFDESLMKA 105
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K + P IQA A + G D + I +TGSGKT AFL PML HI +Q + PG D
Sbjct: 106 IRKSEYSQPTPIQAQAIPAALGGRDIIGIAKTGSGKTAAFLWPMLVHIMDQRELGPG-DG 164
Query: 196 PVGLVMAPTGELVRQ---QVRR------------------------------------GR 216
P+GL++APT EL Q + ++ GR
Sbjct: 165 PIGLILAPTRELSLQIYGEAKKFGKVYNISVCCCYGGGSKWEQSKALEQGAEIVVATPGR 224
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID++ +K TNL RVTYLVLDEAD+MF+MGFEPQ+ I +IRPDRQ +LFS TF
Sbjct: 225 MIDMVK---MKATNLRRVTYLVLDEADKMFNMGFEPQVRSICNHIRPDRQTLLFSATFKK 281
Query: 277 RVEILAR 283
RVE LAR
Sbjct: 282 RVEKLAR 288
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KS 332
R ++ R K ++ +A V ARGLD + V+N+D D + + H ++ K
Sbjct: 375 RNSVITRFKRREVDMMVATDVAARGLDIPHIRTVVNYDIARDIDTHTHRIGRTGRAGEKG 434
Query: 333 CAFRFISEENAIYATDLVKAFELSELVVRDDLKAVA-------DSFIAKVNLGLGQVHGT 385
A+ I++++ ++ LV+ E + V ++L +A +S + N G
Sbjct: 435 TAYTLITDKDKEFSGHLVRNLEGANQEVPEELLKLAMQSSWFRNSRFKQTNKG----KNL 490
Query: 386 GHGGVALNLMKRRIRRG 402
GG L +R + RG
Sbjct: 491 NVGGAGLGFRQRPVHRG 507
>gi|388508122|gb|AFK42127.1| unknown [Medicago truncatula]
Length = 499
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 132/252 (52%), Gaps = 48/252 (19%)
Query: 77 KIKID-YQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
KI +D KNFY+++ + M+ A YR + ++ + K PKP+K++
Sbjct: 46 KINLDGLPHFEKNFYSESPSVRAMTEAEVTEYRLRREITVEGKDVPKPVKSFSDAAFPDY 105
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
+LE K P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + P
Sbjct: 106 VLEEVKKAGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDP 165
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ LV+APT EL Q QVR
Sbjct: 166 G-DGPIVLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLQKGVEIIIA 224
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L N TNL RVTYLVLDEADRM DMGF+PQI +IV IRPDRQ + +S
Sbjct: 225 TPGRLIDMLESNH---TNLRRVTYLVLDEADRMLDMGFDPQIRKIVPQIRPDRQTLYWSA 281
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 282 TWPKEVEQLARQ 293
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 387 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGKTGRAGAKGTAYTFFTA 446
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A +L+ E + V +L A+
Sbjct: 447 ANARFAKELISILEEAGQRVSSELAAMG 474
>gi|3435312|gb|AAC32396.1| RNA helicase-related protein [Homo sapiens]
Length = 709
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 88 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 147
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 148 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 206
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 207 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 266
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 267 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 323
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 324 KKIEKLAR 331
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 434 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 493
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 494 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 544
>gi|345324427|ref|XP_001510775.2| PREDICTED: probable ATP-dependent RNA helicase DDX5
[Ornithorhynchus anatinus]
Length = 614
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + ++IK K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLIKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEVTVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
PI + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PILNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|206725493|ref|NP_001126368.1| ATP-dependent RNA helicase DDX42 [Pongo abelii]
Length = 942
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|75061727|sp|Q5R7D1.1|DDX42_PONAB RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|55731230|emb|CAH92329.1| hypothetical protein [Pongo abelii]
Length = 942
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|15221998|ref|NP_175911.1| DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana]
gi|75333448|sp|Q9C718.1|RH20_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 20
gi|12321578|gb|AAG50841.1|AC073944_8 ethylene-responsive RNA helicase, putative [Arabidopsis thaliana]
gi|17065338|gb|AAL32823.1| Unknown protein [Arabidopsis thaliana]
gi|22136216|gb|AAM91186.1| unknown protein [Arabidopsis thaliana]
gi|332195071|gb|AEE33192.1| DEAD-box ATP-dependent RNA helicase 20 [Arabidopsis thaliana]
Length = 501
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 138/267 (51%), Gaps = 54/267 (20%)
Query: 64 KKKRDKNREIIKSKIKIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCA 116
KK D N +S K+D L KNFY ++ + M+ YRK ++ + K
Sbjct: 39 KKDNDGN----ESPRKLDLDGLTPFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDI 94
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP+K++R G +LE K P IQ+ + + G D + I ETGSGKTL++L
Sbjct: 95 PKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYL 154
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LP + H+ QP + G D P+ LV+APT EL Q
Sbjct: 155 LPAIVHVNAQPMLAHG-DGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKG 213
Query: 211 -QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
QVR GR+ID++ N TNL RVTYLVLDEADRM DMGF+PQI +I
Sbjct: 214 PQVRDLQKGVEIVIATPGRLIDMMESNN---TNLRRVTYLVLDEADRMLDMGFDPQIRKI 270
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
V +IRPDRQ + +S T+P VE L++K
Sbjct: 271 VSHIRPDRQTLYWSATWPKEVEQLSKK 297
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATDL 349
A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F + NA +A +L
Sbjct: 400 ATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKEL 459
Query: 350 VKAFELSELVVRDDLKAVADS 370
+ + V +L ++ S
Sbjct: 460 TNILQEAGQKVSPELASMGRS 480
>gi|320580546|gb|EFW94768.1| ATP-dependent RNA helicase [Ogataea parapolymorpha DL-1]
Length = 529
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 135/262 (51%), Gaps = 54/262 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY +A + S A+RK+ D+ + + P+PI ++ + G +L+
Sbjct: 55 KFEKNFYKEAEAVASRSEDEVAAFRKEHDMTVYGRDIPRPITSFDEAGFPDYVLKEVKAQ 114
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
NP AIQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 115 GFPNPTAIQCQGWPMALSGRDMVGIASTGSGKTLSYCLPAIVHINAQPLLQPG-DGPICL 173
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR++D+
Sbjct: 174 VLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKGQQIRDLARGAEICIATPGRLLDM 233
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 234 LDSGR---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKSVQT 290
Query: 281 LAR-------KTNVCNLSIANS 295
LAR + N+ +L +A S
Sbjct: 291 LARDYLNDYIQVNIGSLDLAAS 312
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYA 346
+ +A V ARG+D K + VIN D P + EDYVH ++ K A ++ N+ A
Sbjct: 396 IMVATDVAARGIDVKGVTTVINHDMPGNVEDYVHRIGRTGRAGEKGTAITMFTDGNSGQA 455
Query: 347 TDLV 350
DL+
Sbjct: 456 HDLI 459
>gi|221057183|ref|XP_002259729.1| ATP-dependent RNA helicase [Plasmodium knowlesi strain H]
gi|193809801|emb|CAQ40505.1| ATP-dependent RNA helicase, putative [Plasmodium knowlesi strain H]
Length = 1354
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/270 (34%), Positives = 143/270 (52%), Gaps = 51/270 (18%)
Query: 59 MKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQL-DLKIRE 113
+K+ KK NRE +++Y ++KN Y Q EIT M + +RK ++ +R
Sbjct: 559 LKKTNKKFLQVNRE------EVEYLPIKKNIYVQVSEITNMKDSDVDLFRKNNGNIIVRG 612
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K P+P++ + Q GL +KIL K N + IQ ++ G D +AI ETGSGKTL
Sbjct: 613 KNCPRPVQYFYQCGLPSKILPILEKKNFKKMFGIQMQTIPALMCGRDVIAIAETGSGKTL 672
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
++L P++RH+ Q P + +D P+ +++ PT EL +Q
Sbjct: 673 SYLFPLIRHVLHQAP-LRNNDGPIAIILTPTRELSKQVKSEARPYCQAVNLRILAVYGGS 731
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
++R GR+ID+L + K+TNL RV+++VLDEADR+ D+GFE QI
Sbjct: 732 NIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQI 791
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
I+ N R D+Q + S TFP ++ LA+K
Sbjct: 792 HNILNNCRKDKQTAMISATFPSYIQNLAKK 821
>gi|353242513|emb|CCA74151.1| probable RNA helicase dbp2 (DEAD box protein) [Piriformospora
indica DSM 11827]
Length = 550
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 133/243 (54%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
++ KNFY + + ++ S A+R+ ++K++ + P+P+ + + G ++ T +
Sbjct: 81 EKFEKNFYAEDKRVSARSDSEIEAFRRAKEIKVQGRGVPRPVTRFDEVGFPNYLMSTIEQ 140
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P IQ A + +SG D VAI++TGSGKT++F LP + HI QP + PG D P+
Sbjct: 141 QGFAEPTPIQCQAWPMALSGRDVVAISQTGSGKTISFALPAMLHINAQPLLAPG-DGPIV 199
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
L++APT EL Q Q+R GR+ID
Sbjct: 200 LILAPTRELAVQIQTECTKFGANSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLID 259
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L +N TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 260 MLEQNK---TNLRRVTYLVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKDVQ 316
Query: 280 ILA 282
LA
Sbjct: 317 KLA 319
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ AF + + EN+ A +
Sbjct: 424 IATDVASRGLDVKDVSYVINYDFPNNCEDYIHRIGRTGRAGKTGTAFTYFTAENSKAAGE 483
Query: 349 LV 350
LV
Sbjct: 484 LV 485
>gi|82595021|ref|XP_725673.1| RNA helicase [Plasmodium yoelii yoelii 17XNL]
gi|23480764|gb|EAA17238.1| similar to RNA helicases, putative [Plasmodium yoelii yoelii]
Length = 1381
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/250 (36%), Positives = 136/250 (54%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQL-DLKIREKCAPKPIKTWRQTGLTTKIL 133
+IDY ++KN Y Q EIT MS +RK ++ +R K P+PI+ + Q GL KIL
Sbjct: 570 EIDYLPIKKNVYVQVSEITNMSEKDVEMFRKNNGNIVVRGKNCPRPIQYFYQCGLPGKIL 629
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K N + +IQ A ++ G D +AI ETGSGKT+++L P++RH+ Q + +
Sbjct: 630 NILEKKNFKKMFSIQMQAIPALMCGRDIIAIAETGSGKTISYLFPLIRHVLHQDK-LRNN 688
Query: 194 DSPVGLVMAPTGEL---VRQQ---------------------------VRR--------- 214
D P+G+++ PT EL V+ + ++R
Sbjct: 689 DGPIGIILTPTRELSIQVKNEANIYCKAVDLKILAVYGGSNIGAQLNVLKRGVEIIVGTP 748
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+ID+L + K+TNL R +++VLDEADR+ D+GFE QI I+ N R D+Q + S TF
Sbjct: 749 GRIIDILTISNSKVTNLNRASFIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISATF 808
Query: 275 PPRVEILARK 284
P ++ LA+K
Sbjct: 809 PNYIQNLAKK 818
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
IA SV ARG+D K + LVIN++ P+ EDY+H ++ + A+ FI+ +
Sbjct: 919 IATSVMARGIDIKNIILVINYECPDHIEDYIHKIGRTGRSNNIGYAYTFIT------PNE 972
Query: 349 LVKAFELSELV 359
KA+++ L+
Sbjct: 973 HTKAYDIYNLI 983
>gi|326934003|ref|XP_003213086.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Meleagris
gallopavo]
Length = 944
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RVTYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ + + K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|296201830|ref|XP_002748194.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Callithrix jacchus]
Length = 614
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 138/264 (52%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + +++R + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLSRRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|224086197|ref|XP_002193200.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Taeniopygia guttata]
Length = 923
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RVTYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ + + K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|221307593|ref|NP_001138306.1| probable ATP-dependent RNA helicase DDX5 [Pan troglodytes]
gi|156630859|sp|A5A6J2.1|DDX5_PANTR RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5
gi|146741418|dbj|BAF62365.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Pan troglodytes verus]
Length = 614
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVENCIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|71896321|ref|NP_001026097.1| ATP-dependent RNA helicase DDX42 [Gallus gallus]
gi|82194905|sp|Q5F485.1|DDX42_CHICK RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|60098437|emb|CAH65049.1| hypothetical protein RCJMB04_2e15 [Gallus gallus]
Length = 944
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 130/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y KNFY + EIT ++P R +L+L++ P+P ++ + G +++
Sbjct: 207 EIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RVTYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ + + K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNPWFRKSRFKGGKGKKPNIGGGGLGYRER 663
>gi|348560357|ref|XP_003465980.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Cavia
porcellus]
Length = 614
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|115384638|ref|XP_001208866.1| hypothetical protein ATEG_01501 [Aspergillus terreus NIH2624]
gi|114196558|gb|EAU38258.1| hypothetical protein ATEG_01501 [Aspergillus terreus NIH2624]
Length = 496
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 166/370 (44%), Gaps = 107/370 (28%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S +RK+ ++ ++ + P+P++T+ + G +L
Sbjct: 69 KFEKSFYKEHPDVANRSQRDVDEFRKKHEMSVQGRNVPRPVETFDEAGFPQYVLGEVKAQ 128
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 129 GFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 187
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 188 VLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 247
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V I
Sbjct: 248 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVNI 304
Query: 281 LA-------RKTNVCNLS------IANSVRARGLDEKELEL------------------- 308
+ R T + ++ +A V +RG+ +L +
Sbjct: 305 GSMDLSANHRITQIVEVTGKSPIMVATDVASRGIGMMKLAIHPLPSPLLPFSFLSPSQAP 364
Query: 309 -------------------------VINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
V+N+D PN+ EDYVH ++ K A F +
Sbjct: 365 SPIEVMVEKSNSLCSVSTYVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTT 424
Query: 341 ENAIYATDLV 350
+N+ A DLV
Sbjct: 425 DNSKQARDLV 434
>gi|194216755|ref|XP_001495197.2| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Equus
caballus]
Length = 614
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|351710344|gb|EHB13263.1| Putative ATP-dependent RNA helicase DDX5 [Heterocephalus glaber]
Length = 615
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|328875962|gb|EGG24326.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 806
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/324 (33%), Positives = 160/324 (49%), Gaps = 61/324 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
KI+Y++ K FY + EI+ ++P R+ LD++ PI + G +++
Sbjct: 285 KIEYEEFDKCFYEEHAEISALTPERVFQLRRDLDIRATGNDLINPITGFGHIGFDDIMIQ 344
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+ K +E P +IQ A + +SG D +AI +TGSGKT +F+ P + HI QP + GD
Sbjct: 345 SIQKQGYETPTSIQKQAVPIALSGRDLIAIAKTGSGKTASFIWPAIVHIMNQPYLEKGD- 403
Query: 195 SPVGLVMAPTGELVRQ---------------------------QVRR------------G 215
P+ + ++PT EL Q Q R G
Sbjct: 404 GPIAVFVSPTRELAHQIYMETQKFAKPYKIKTTVVYGGVTKLLQCRELKAGCEILVGTPG 463
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID++ +K T + R T+LVLDEADRMFDMGFEPQ+ I+ IRPDRQ +LFS TFP
Sbjct: 464 RIIDMI---KLKATKMNRCTFLVLDEADRMFDMGFEPQVQSIIGQIRPDRQTLLFSATFP 520
Query: 276 PRVEILARK--TNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC 333
+E LAR T+ +SI NS A D K+ V+ P+D E + WL
Sbjct: 521 NAIEQLARNILTDPIRISIGNSGSANQ-DIKQFVKVL----PSDGEKW------GWLTET 569
Query: 334 AFRFISEEN-AIYATDLVKAFELS 356
++E N I+ + V +LS
Sbjct: 570 LPLMLTEGNVVIFVSTKVAVEQLS 593
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKS 332
R +I++R K+ + +A V ARGLD ++ V+NFD D + + H ++ +
Sbjct: 615 RTQIISRFKSGTVPILVATDVAARGLDISLIKNVVNFDVSRDIDSHTHRVGRTGRAGTQG 674
Query: 333 CAFRFISEENAIYATDLVKAFELSELVVRDDLKAVA 368
A I+ ++ ++ DLV+ E + V +L VA
Sbjct: 675 TAHTLITPKDTHFSADLVRHLEEANQNVPPELITVA 710
>gi|75076425|sp|Q4R6M5.1|DDX5_MACFA RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5
gi|67969804|dbj|BAE01250.1| unnamed protein product [Macaca fascicularis]
Length = 614
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|197692465|dbj|BAG70196.1| ATP-dependent RNA helicase DDX5 [Homo sapiens]
Length = 614
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LVKAF-ELSELVVRDDLKAVAD 369
L+ E S+ + L+ V D
Sbjct: 456 LISVLREASQAINPKLLQLVED 477
>gi|50311069|ref|XP_455558.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660286|sp|Q6CKI1.1|PRP5_KLULA RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|49644694|emb|CAG98266.1| KLLA0F10505p [Kluyveromyces lactis]
Length = 812
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 139/257 (54%), Gaps = 51/257 (19%)
Query: 80 IDYQQ------LRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPIKTWRQTGL 128
IDY + L K Y + ++ MS ++L ++KI K PKP+ W Q GL
Sbjct: 193 IDYSKVLNLITLNKCLYREPNDLGLMSEKDVEELRLSLDNIKISGKDCPKPVTKWSQLGL 252
Query: 129 TTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQP 187
+++I++ S +L IQ A I+SG D + I++TGSGKT+AFLLP++R I QP
Sbjct: 253 SSEIMDLISNELQFVTLTPIQCQAIPAIMSGRDVIGISKTGSGKTVAFLLPLVRQIKAQP 312
Query: 188 PVVPGDDSPVGLVMAPTGEL---------------------------VRQQVRR------ 214
P+ P + P+GL++ PT EL ++QQ+
Sbjct: 313 PLAPDETGPIGLILTPTRELAVQIQEEALKFCKGSGISSICCVGGSELKQQINELKRGVD 372
Query: 215 ------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAV 268
GR IDL+ N + + TR++++V+DEADR+FD+GF PQ+ +I+ IRPD+Q V
Sbjct: 373 IIVATPGRFIDLMTLNSGHLLSPTRISFVVMDEADRLFDLGFGPQVNQIMGCIRPDKQCV 432
Query: 269 LFSPTFPPRVEILARKT 285
LFS TFP +++ A +T
Sbjct: 433 LFSATFPSKLKHFASRT 449
>gi|389584246|dbj|GAB66979.1| ATP-dependent RNA helicase [Plasmodium cynomolgi strain B]
Length = 1410
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 152/291 (52%), Gaps = 54/291 (18%)
Query: 41 GRRLPAEDSHSASDYEL---FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREIT 97
G P ++ S+Y + +K+ KK NR+ +++Y ++KN Y Q EIT
Sbjct: 549 GSSEPIDNLSEDSEYNIETNALKKTNKKMLQVNRD------QVEYLPIKKNIYVQVSEIT 602
Query: 98 RMSPA----YRKQL-DLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPAS 152
M + +RK ++ +R K P+P++ + Q GL +KIL + N + IQ
Sbjct: 603 NMKESDVDLFRKNNGNIIVRGKNCPRPVQYFYQCGLPSKILPILERKNFKKMFGIQMQTI 662
Query: 153 ALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-- 210
++ G D +AI ETGSGKTL++L P++RH+ QPP+ +D P+ +++ PT EL +Q
Sbjct: 663 PALMCGRDVIAIAETGSGKTLSYLFPVIRHVLHQPPLR-NNDGPIAIILTPTRELSKQVK 721
Query: 211 ----------------------------QVRR---------GRMIDLLCKNGVKITNLTR 233
++R GR+ID+L + K+TNL R
Sbjct: 722 SEARPYCQAVNLRILAVYGGSNIGTQLNTLKRGVEILVGTPGRIIDILTISNCKVTNLNR 781
Query: 234 VTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
V+++VLDEADR+ D+GFE QI I+ N R D+Q + S TFP ++ LA++
Sbjct: 782 VSFVVLDEADRLLDLGFESQIHNILNNCRKDKQTAMISATFPTYIQNLAKR 832
>gi|225456912|ref|XP_002277894.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Vitis
vinifera]
Length = 611
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY ++ + MS YR + ++ + PKPI+ +++ LE +KL
Sbjct: 149 FEKNFYIESPSVQAMSEQEAMLYRARREITVEGYDVPKPIRHFQEANFPGYCLEVIAKLG 208
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQA + + G D + I ETGSGKTLA+LLP L H+ QPP+V G + P+ LV
Sbjct: 209 FVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPPLVRG-EGPIVLV 267
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID+L
Sbjct: 268 LAPTRELAVQIQEEALKFGSFTKIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 327
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ + +S T+P VE L
Sbjct: 328 E---AQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPREVETL 384
Query: 282 ARK 284
AR+
Sbjct: 385 ARQ 387
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P+ EDYVH ++ K A F +
Sbjct: 481 KSGRSPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAITFFTH 540
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGG 389
NA +A DL+K + + VV L A+A S + G G GG
Sbjct: 541 SNAKFARDLIKILQEAGQVVSPALSAMARSSGSAFGGSGGNFRSRGRGG 589
>gi|4758138|ref|NP_004387.1| probable ATP-dependent RNA helicase DDX5 [Homo sapiens]
gi|300793700|ref|NP_001178324.1| probable ATP-dependent RNA helicase DDX5 [Bos taurus]
gi|384475891|ref|NP_001245091.1| probable ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|73965213|ref|XP_850467.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 2
[Canis lupus familiaris]
gi|301778273|ref|XP_002924553.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Ailuropoda melanoleuca]
gi|332227004|ref|XP_003262677.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Nomascus leucogenys]
gi|397480284|ref|XP_003811416.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1 [Pan
paniscus]
gi|402900780|ref|XP_003913345.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Papio anubis]
gi|403303806|ref|XP_003942513.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Saimiri boliviensis boliviensis]
gi|410981520|ref|XP_003997116.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Felis catus]
gi|426238277|ref|XP_004013081.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Ovis aries]
gi|426347221|ref|XP_004041256.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 isoform 1
[Gorilla gorilla gorilla]
gi|129383|sp|P17844.1|DDX5_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5; AltName: Full=RNA helicase p68
gi|35220|emb|CAA36324.1| unnamed protein product [Homo sapiens]
gi|38318|emb|CAA33751.1| unnamed protein product [Homo sapiens]
gi|2599360|gb|AAB84094.1| RNA helicase p68 [Homo sapiens]
gi|16359122|gb|AAH16027.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
gi|30582725|gb|AAP35589.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA helicase,
68kDa) [Homo sapiens]
gi|61362303|gb|AAX42197.1| DEAD box polypeptide 5 [synthetic construct]
gi|61362310|gb|AAX42198.1| DEAD box polypeptide 5 [synthetic construct]
gi|119614608|gb|EAW94202.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, isoform CRA_a [Homo
sapiens]
gi|119614609|gb|EAW94203.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, isoform CRA_a [Homo
sapiens]
gi|123979568|gb|ABM81613.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [synthetic construct]
gi|123994197|gb|ABM84700.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [synthetic construct]
gi|168277560|dbj|BAG10758.1| ATP-dependent RNA helicase DDX5 [synthetic construct]
gi|197692215|dbj|BAG70071.1| ATP-dependent RNA helicase DDX5 [Homo sapiens]
gi|296476161|tpg|DAA18276.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 isoform 2 [Bos
taurus]
gi|380810156|gb|AFE76953.1| putative ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|383416203|gb|AFH31315.1| putative ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|384945576|gb|AFI36393.1| putative ATP-dependent RNA helicase DDX5 [Macaca mulatta]
gi|410264808|gb|JAA20370.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Pan troglodytes]
Length = 614
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|356522893|ref|XP_003530077.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
20-like [Glycine max]
Length = 523
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 130/246 (52%), Gaps = 49/246 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY ++ + M+ A YR+Q ++ + + PKP+K++ G ++E +K
Sbjct: 43 HFEKNFYIESPAVRAMTDAEVNEYRQQREITVEGRDIPKPVKSFHDAGFPEYVMEEITKA 102
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPM--LRHIWEQPPVVPGDDSPV 197
P IQ+ + + G D + I ETGSGKTLA+LLP+ + H+ QP + PG D P+
Sbjct: 103 GFTEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPLSSIVHVNAQPILNPG-DGPI 161
Query: 198 GLVMAPTGELVRQ---------------------------QVRR------------GRMI 218
LV+APT EL Q QVR GR+I
Sbjct: 162 VLVLAPTRELAVQIQQEATKFGASSRIKSTCIYGGVPKGPQVRDLRKGVEIVIATPGRLI 221
Query: 219 DLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRV 278
D+L N TNL RVTYLVLDEADRM DMGF+PQ+ +I IRPDRQ + +S T+P V
Sbjct: 222 DMLESNH---TNLQRVTYLVLDEADRMLDMGFDPQLRKIASQIRPDRQTLYWSATWPKEV 278
Query: 279 EILARK 284
E LARK
Sbjct: 279 EQLARK 284
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 15/148 (10%)
Query: 227 KITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTN 286
K L ++ ++D + + MG + +I + +R D P + I K++
Sbjct: 319 KYDKLVKLPEDIMDGSRILIFMGTKKGCDQITRQLRMDGW---------PALSIHGDKSH 369
Query: 287 V---CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
LS S ++ GLD K+++ VIN+D EDYVH ++ K A+ + +
Sbjct: 370 AERDWVLSEFKSGKSPGLDVKDVKYVINYDFRGSLEDYVHRIGRIGRAGAKGTAYPYFTA 429
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A DL+ E + V +L A+
Sbjct: 430 ANARFAKDLIAILEEAGQKVSPELAAMG 457
>gi|355568839|gb|EHH25120.1| hypothetical protein EGK_08882 [Macaca mulatta]
Length = 614
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|74210167|dbj|BAE21355.1| unnamed protein product [Mus musculus]
Length = 690
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 107 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 166
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 167 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 226
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 227 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 285
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 286 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 341
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 342 DQIRPDRQTLMWSATWPKEVRQLA 365
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 471 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 530
Query: 349 LV 350
L+
Sbjct: 531 LI 532
>gi|341940436|sp|Q61656.2|DDX5_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box RNA helicase DEAD1; Short=mDEAD1; AltName:
Full=DEAD box protein 5; AltName: Full=RNA helicase p68
Length = 614
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|226021|prf||1406327A growth regulated nuclear 68 protein
Length = 594
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 12 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 71
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 72 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 131
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 132 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 190
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 191 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 246
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 247 DQIRPDRQTLMWSATWPKEVRQLA 270
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 376 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 435
Query: 349 LV 350
L+
Sbjct: 436 LI 437
>gi|348511436|ref|XP_003443250.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Oreochromis niloticus]
Length = 627
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 136/266 (51%), Gaps = 57/266 (21%)
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKC 115
+R +KK+ D N + + KNFY + E+ RMS YR++ ++ +R
Sbjct: 39 ERLRKKRWDLN----------ELPKFEKNFYNENSEVQRMSQYDVEEYRRKKEITVRGSG 88
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP+ ++ +++ + N + P AIQA L +SG D V I +TGSGKTL++
Sbjct: 89 CPKPVTSFHHAQFPQYVMDVLVQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLSY 148
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLP + HI QP + G D P+ LV+APT EL +Q
Sbjct: 149 LLPAIVHINHQPYLERG-DGPICLVLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPK 207
Query: 211 --QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
Q+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI +
Sbjct: 208 GPQIRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRK 264
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILA 282
IV IRPDRQ +++S T+P V LA
Sbjct: 265 IVDQIRPDRQTLMWSATWPKEVRQLA 290
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 275 PPRVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWL 330
P R +LA ++ + IA V +RGLD ++++ VIN+D PN EDY+H +S
Sbjct: 378 PERDWVLAEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTN 437
Query: 331 KSCAFRFISEENAIYATDLVKAFELSELVVRDDLKAVAD 369
K A+ F + N A +L++ E + + L + D
Sbjct: 438 KGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVD 476
>gi|205364353|gb|ACI04543.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5, partial [Rattus
norvegicus]
Length = 614
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|148701846|gb|EDL33793.1| mCG19408 [Mus musculus]
Length = 615
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLKFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHIIHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N A+D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQASD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|83816893|ref|NP_031866.2| probable ATP-dependent RNA helicase DDX5 [Mus musculus]
gi|26354006|dbj|BAC40633.1| unnamed protein product [Mus musculus]
gi|74141529|dbj|BAE38540.1| unnamed protein product [Mus musculus]
gi|74177712|dbj|BAE38954.1| unnamed protein product [Mus musculus]
gi|82568932|gb|AAI08370.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
gi|120537322|gb|AAI29875.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
gi|127799027|gb|AAH62916.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
gi|148702364|gb|EDL34311.1| mCG2872, isoform CRA_a [Mus musculus]
gi|148702366|gb|EDL34313.1| mCG2872, isoform CRA_a [Mus musculus]
gi|148702367|gb|EDL34314.1| mCG2872, isoform CRA_a [Mus musculus]
Length = 615
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|56090441|ref|NP_001007614.1| probable ATP-dependent RNA helicase DDX5 [Rattus norvegicus]
gi|354479420|ref|XP_003501908.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Cricetulus
griseus]
gi|50927691|gb|AAH79036.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Rattus norvegicus]
gi|149054596|gb|EDM06413.1| ddx5 gene, isoform CRA_b [Rattus norvegicus]
gi|149054597|gb|EDM06414.1| ddx5 gene, isoform CRA_b [Rattus norvegicus]
gi|149054598|gb|EDM06415.1| ddx5 gene, isoform CRA_b [Rattus norvegicus]
gi|344243055|gb|EGV99158.1| putative ATP-dependent RNA helicase DDX5 [Cricetulus griseus]
Length = 615
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|358056965|dbj|GAA97124.1| hypothetical protein E5Q_03800 [Mixia osmundae IAM 14324]
Length = 559
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 139/263 (52%), Gaps = 54/263 (20%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + R ++ S A+R ++++ + PKP++++ + G IL K
Sbjct: 75 KFEKNFYVEDRRVSARSERDVDAFRAAKEIQVFGRGIPKPVESFSEAGFPDYILSEIKKA 134
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N P IQ+ A + +SG D VA++ TGSGKT+AF LP + HI QP + PG D P+ L
Sbjct: 135 NFPAPSPIQSQAWPMALSGRDLVAVSATGSGKTIAFSLPAMIHINAQPLLAPG-DGPIVL 193
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
+++PT EL Q Q+R GR+ID+
Sbjct: 194 ILSPTRELAVQTAAECTRFGASSKIRNTCVYGGAPKGGQIRDLQRGAEIVIATPGRLIDM 253
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 254 LESGK---TNLLRVTYLVMDEADRMLDMGFEPQIRKIVDQIRPDRQTLMFSATWPKEVQK 310
Query: 281 LAR-------KTNVCNLSIANSV 296
LA + NV +L ++ +V
Sbjct: 311 LASEYLRDFAQVNVGSLELSANV 333
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + IA V +RGLD K++ VIN+D PN EDY+H ++ K A+ + +
Sbjct: 409 KSGRSPIMIATDVASRGLDVKDISYVINYDMPNQIEDYIHRIGRTGRAGRKGTAYSYFTP 468
Query: 341 ENAIYATDLVK 351
E + A DL K
Sbjct: 469 EQSKLARDLAK 479
>gi|297733718|emb|CBI14965.3| unnamed protein product [Vitis vinifera]
Length = 611
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY ++ + MS YR + ++ + PKPI+ +++ LE +KL
Sbjct: 256 FEKNFYIESPSVQAMSEQEAMLYRARREITVEGYDVPKPIRHFQEANFPGYCLEVIAKLG 315
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQA + + G D + I ETGSGKTLA+LLP L H+ QPP+V G + P+ LV
Sbjct: 316 FVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQPPLVRG-EGPIVLV 374
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID+L
Sbjct: 375 LAPTRELAVQIQEEALKFGSFTKIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 434
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ + +S T+P VE L
Sbjct: 435 ---EAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPREVETL 491
Query: 282 ARK 284
AR+
Sbjct: 492 ARQ 494
>gi|30584123|gb|AAP36310.1| Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 5 (RNA
helicase, 68kDa) [synthetic construct]
gi|60653929|gb|AAX29657.1| DEAD box polypeptide 5 [synthetic construct]
Length = 615
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|401889158|gb|EJT53098.1| ATP-dependent RNA helicase DBP2 (p68-like protein) [Trichosporon
asahii var. asahii CBS 2479]
Length = 387
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 130/243 (53%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + + ++ S A +R+ D++I+ P+PI ++ + G ++ +
Sbjct: 20 KFEKNFYIEDKAVSARSDAEIAEFRRAKDMRIQGTNIPRPITSFEEAGFPEYVMSEIRAM 79
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P IQ A + +SG D VAI ETGSGKT++F LP + HI QP + PG D P+ L
Sbjct: 80 GFKEPSPIQCQAWPMALSGRDVVAIAETGSGKTISFALPAMVHINAQPLLAPG-DGPIVL 138
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 139 ILAPTRELAVQIQAECTKFGKSSRIRNTAVYGGAPKGAQIRDLQRGCEIVVATPGRLIDM 198
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS T+P V+
Sbjct: 199 LESGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKDVQR 255
Query: 281 LAR 283
LA+
Sbjct: 256 LAQ 258
>gi|195171504|ref|XP_002026545.1| GL21821 [Drosophila persimilis]
gi|194111461|gb|EDW33504.1| GL21821 [Drosophila persimilis]
Length = 812
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 127/248 (51%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ KNFYT EI + R L +K+ P P+ ++ G ++++
Sbjct: 229 EIEYEPFEKNFYTAHEEIASLDEEGVRELRHTLGVKVTGPSPPNPVTSFGHFGFDEQLIK 288
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A ++G D + I +TGSGKT AF+ P+L H+ +Q + PG D
Sbjct: 289 AVRKAEYTQPTPIQAQAVPTALAGRDIIGIAKTGSGKTAAFIWPLLMHLMDQRELKPG-D 347
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 348 GPIGLILAPTRELSLQIYNEAKKFGKVYNINVVCCYGGGSKWEQSKALEQGAEIVVATPG 407
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 408 RMIDMV---KMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFK 464
Query: 276 PRVEILAR 283
R+E LAR
Sbjct: 465 KRIERLAR 472
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I K C++ +A V ARGLD + V+N+D D + + H ++ K AF
Sbjct: 563 ITQFKRKECDILVATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAFT 622
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+++++ +A LV+ E ++ V +DL +A
Sbjct: 623 LVTDKDKEFAGHLVRNLEGADQEVPEDLMELA 654
>gi|125979227|ref|XP_001353646.1| GA19578 [Drosophila pseudoobscura pseudoobscura]
gi|54642411|gb|EAL31160.1| GA19578 [Drosophila pseudoobscura pseudoobscura]
Length = 812
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 127/248 (51%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ KNFYT EI + R L +K+ P P+ ++ G ++++
Sbjct: 229 EIEYEPFEKNFYTAHEEIASLDEEGVRELRHTLGVKVTGPSPPNPVTSFGHFGFDEQLIK 288
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A ++G D + I +TGSGKT AF+ P+L H+ +Q + PG D
Sbjct: 289 AVRKAEYTQPTPIQAQAVPTALAGRDIIGIAKTGSGKTAAFIWPLLMHLMDQRELKPG-D 347
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 348 GPIGLILAPTRELSLQIYNEAKKFGKVYNINVVCCYGGGSKWEQSKALEQGAEIVVATPG 407
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 408 RMIDMV---KMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFK 464
Query: 276 PRVEILAR 283
R+E LAR
Sbjct: 465 KRIERLAR 472
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I K C++ +A V ARGLD + V+N+D D + + H ++ K AF
Sbjct: 563 ITQFKRKECDILVATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAFT 622
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+++++ +A LV+ E ++ V +DL +A
Sbjct: 623 LVTDKDKEFAGHLVRNLEGADQEVPEDLMELA 654
>gi|355754295|gb|EHH58260.1| hypothetical protein EGM_08064, partial [Macaca fascicularis]
Length = 599
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 17 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 76
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 77 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 136
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 137 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 195
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 196 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 251
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 252 DQIRPDRQTLMWSATWPKEVRQLA 275
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 381 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 440
Query: 349 LV 350
L+
Sbjct: 441 LI 442
>gi|291406391|ref|XP_002719530.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 isoform 3
[Oryctolagus cuniculus]
Length = 614
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEVTVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|410901955|ref|XP_003964460.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Takifugu
rubripes]
Length = 634
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 128/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY++ E+ RMS + YR++ ++ IR PKPI + Q +++ +
Sbjct: 53 KFEKNFYSEHPEVQRMSQSELEDYRRKKEITIRGSGCPKPIIKFHQAHFPQYVMDVLLEQ 112
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N + P IQA L +SG D V I +TGSGKTL++LLP + HI QP + GD P+ L
Sbjct: 113 NFKEPTPIQAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGD-GPICL 171
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 172 VLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDF 231
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 232 L---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 288
Query: 281 LA 282
LA
Sbjct: 289 LA 290
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 275 PPRVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWL 330
P R +LA ++ + IA V +RGLD ++++ VIN+D PN EDY+H +S
Sbjct: 378 PERDWVLAEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTN 437
Query: 331 KSCAFRFISEENAIYATDLVKAFELSELVVRDDLKAVADS 370
K A+ F + N A +L++ E + + L +AD+
Sbjct: 438 KGTAYTFFTPGNVRQARELIRVLEEARQAINPKLLQLADN 477
>gi|406699116|gb|EKD02333.1| hypothetical protein A1Q2_03389 [Trichosporon asahii var. asahii
CBS 8904]
Length = 437
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 130/243 (53%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + + ++ S A +R+ D++I+ P+PI ++ + G ++ +
Sbjct: 70 KFEKNFYIEDKAVSARSDAEIAEFRRAKDMRIQGTNIPRPITSFEEAGFPEYVMSEIRAM 129
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P IQ A + +SG D VAI ETGSGKT++F LP + HI QP + PG D P+ L
Sbjct: 130 GFKEPSPIQCQAWPMALSGRDVVAIAETGSGKTISFALPAMVHINAQPLLAPG-DGPIVL 188
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 189 ILAPTRELAVQIQAECTKFGKSSRIRNTAVYGGAPKGAQIRDLQRGCEIVVATPGRLIDM 248
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS T+P V+
Sbjct: 249 LESGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFSATWPKDVQR 305
Query: 281 LAR 283
LA+
Sbjct: 306 LAQ 308
>gi|302685145|ref|XP_003032253.1| hypothetical protein SCHCODRAFT_82297 [Schizophyllum commune H4-8]
gi|300105946|gb|EFI97350.1| hypothetical protein SCHCODRAFT_82297 [Schizophyllum commune H4-8]
Length = 488
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 130/243 (53%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
++ KNFY + + +T R +R+ D+K++ + P+P+ ++ + G ++ T
Sbjct: 19 EKFEKNFYQEDKRVTARSEREIEEFRRSKDIKVQGRGVPRPVTSFDEVGFPEYLMATIRA 78
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P AIQ + + +SG D VAI +TGSGKT++F LP + HI QP + PG D P+
Sbjct: 79 QGFPAPTAIQCQSWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLSPG-DGPIA 137
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL Q Q+R GR+ID
Sbjct: 138 LVLAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEVVIATPGRLID 197
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 198 MLETGK---TNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQ 254
Query: 280 ILA 282
LA
Sbjct: 255 KLA 257
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ K A+ + + ENA A +
Sbjct: 362 IATDVASRGLDVKDIGYVINYDFPNNCEDYIHRIGRTGRAGAKGTAYTYFTTENAKSARE 421
Query: 349 LVKAFELSELVVRDDLKAVA 368
LV ++ VV +L+ +A
Sbjct: 422 LVSILTEAKQVVPPELQEMA 441
>gi|444726978|gb|ELW67488.1| putative ATP-dependent RNA helicase DDX5 [Tupaia chinensis]
Length = 614
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEVTVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|189239856|ref|XP_974261.2| PREDICTED: similar to CG6418 CG6418-PB [Tribolium castaneum]
Length = 699
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 128/244 (52%), Gaps = 41/244 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y+ KNFY + EI +S RK D+ + PKP+ ++ K+L+
Sbjct: 186 IEYKPFEKNFYNEHPEIASLSNKQVAELRKTFDITVSGTHPPKPVSSFAHFNFDDKLLKA 245
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K + +P IQA A + G D + I +TGSGKT AFL P+L+H+ QPPV G +
Sbjct: 246 IIKAEYTSPTPIQAQAVPCALQGRDVLGIAQTGSGKTAAFLWPLLKHVSTQPPVTAG-EG 304
Query: 196 PVGLVMAPTGELVRQ----QVRRGRMIDL--LC--------------KNGVKI------- 228
P L++APT EL Q + R+ DL +C K G I
Sbjct: 305 PAALILAPTRELAIQIYNEAKKFARVYDLTVVCAYGGGSKWEQSLALKEGADIVVATPGR 364
Query: 229 ---------TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
TNL RVT+LVLDEADRMF++GFEPQ+ + ++RPDRQ +LFS TF R+E
Sbjct: 365 IIDHVKGGATNLQRVTFLVLDEADRMFELGFEPQVRSVCNHVRPDRQTLLFSATFRKRIE 424
Query: 280 ILAR 283
LA+
Sbjct: 425 KLAK 428
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I A K C+L +A V ARGLD + V+N+D D + + H ++ + A+
Sbjct: 519 ITAFKKKECSLLVATDVAARGLDIPHIRTVVNYDIARDIDTHTHRIGRTGRAGNQGTAYT 578
Query: 337 FISEENAIYATDLVKAFE 354
I+ ++ + +VK E
Sbjct: 579 LITPKDKEFVGHIVKNLE 596
>gi|344291256|ref|XP_003417352.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Loxodonta
africana]
Length = 616
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 137/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + ++ R + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQDVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVND 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|334323205|ref|XP_001379329.2| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Monodelphis
domestica]
Length = 614
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + ++IK K ++ + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLIKKKWNLEELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
PI + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PILNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|55562721|gb|AAH86320.1| Ddx5 protein, partial [Mus musculus]
Length = 648
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 65 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 124
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 125 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 184
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 185 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 243
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 244 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 299
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 300 DQIRPDRQTLMWSATWPKEVRQLA 323
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 429 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 488
Query: 349 LV 350
L+
Sbjct: 489 LI 490
>gi|197099326|ref|NP_001126958.1| probable ATP-dependent RNA helicase DDX5 [Pongo abelii]
gi|75061603|sp|Q5R4I9.1|DDX5_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX5; AltName:
Full=DEAD box protein 5
gi|55733290|emb|CAH93327.1| hypothetical protein [Pongo abelii]
Length = 614
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKIDYQ-QLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWDLDEPPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|120538559|gb|AAI29874.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Mus musculus]
Length = 615
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLKFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|90075448|dbj|BAE87404.1| unnamed protein product [Macaca fascicularis]
Length = 566
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|270012072|gb|EFA08520.1| hypothetical protein TcasGA2_TC006173 [Tribolium castaneum]
Length = 702
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/244 (38%), Positives = 128/244 (52%), Gaps = 41/244 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y+ KNFY + EI +S RK D+ + PKP+ ++ K+L+
Sbjct: 186 IEYKPFEKNFYNEHPEIASLSNKQVAELRKTFDITVSGTHPPKPVSSFAHFNFDDKLLKA 245
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K + +P IQA A + G D + I +TGSGKT AFL P+L+H+ QPPV G +
Sbjct: 246 IIKAEYTSPTPIQAQAVPCALQGRDVLGIAQTGSGKTAAFLWPLLKHVSTQPPVTAG-EG 304
Query: 196 PVGLVMAPTGELVRQ----QVRRGRMIDL--LC--------------KNGVKI------- 228
P L++APT EL Q + R+ DL +C K G I
Sbjct: 305 PAALILAPTRELAIQIYNEAKKFARVYDLTVVCAYGGGSKWEQSLALKEGADIVVATPGR 364
Query: 229 ---------TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
TNL RVT+LVLDEADRMF++GFEPQ+ + ++RPDRQ +LFS TF R+E
Sbjct: 365 IIDHVKGGATNLQRVTFLVLDEADRMFELGFEPQVRSVCNHVRPDRQTLLFSATFRKRIE 424
Query: 280 ILAR 283
LA+
Sbjct: 425 KLAK 428
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I A K C+L +A V ARGLD + V+N+D D + + H ++ + A+
Sbjct: 519 ITAFKKKECSLLVATDVAARGLDIPHIRTVVNYDIARDIDTHTHRIGRTGRAGNQGTAYT 578
Query: 337 FISEENAIYATDLVKAFE 354
I+ ++ + +VK E
Sbjct: 579 LITPKDKEFVGHIVKNLE 596
>gi|343958674|dbj|BAK63192.1| probable ATP-dependent RNA helicase DDX5 [Pan troglodytes]
Length = 614
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 135/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGSPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|71003590|ref|XP_756461.1| hypothetical protein UM00314.1 [Ustilago maydis 521]
gi|46096066|gb|EAK81299.1| hypothetical protein UM00314.1 [Ustilago maydis 521]
Length = 594
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 127/241 (52%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + ++ S + YR + I+ + PKP+ ++ + G IL K+
Sbjct: 90 FEKNFYVEDPRVSNRSDSEVQQYRASKQMTIQGQNVPKPVTSFDEAGFPDYILSEIKKMG 149
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQ+ A + +SG D VAI ETGSGKT+ F LP + HI QP + PG D P+ L+
Sbjct: 150 FSEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMVHINAQPLLKPG-DGPIALI 208
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID++
Sbjct: 209 LAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKGPQIRDLQRGAEICIATPGRLIDMV 268
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
TNL RVTYLV+DEADRM DMGFEPQI +I+Q IRPDRQ ++FS T+P V+ L
Sbjct: 269 DAGK---TNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPKEVQRL 325
Query: 282 A 282
A
Sbjct: 326 A 326
>gi|302782315|ref|XP_002972931.1| hypothetical protein SELMODRAFT_98552 [Selaginella moellendorffii]
gi|300159532|gb|EFJ26152.1| hypothetical protein SELMODRAFT_98552 [Selaginella moellendorffii]
Length = 534
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 158/303 (52%), Gaps = 56/303 (18%)
Query: 65 KKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPI 120
+K+D + ++ + + KNFY + + ++ +R++ D+ ++ + PKP+
Sbjct: 30 RKKDFDSMVLPKEQFDNLSPFEKNFYIEHPSVAALTDDEVVDFRRRKDITVQGRNVPKPV 89
Query: 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPML 180
+++ + +L+ K + P AIQA + + G D V + ETGSGKTLA+LLP +
Sbjct: 90 RSFAEASFPDYVLQEVLKAGFKEPTAIQAQGWPMALKGRDLVGLAETGSGKTLAYLLPAI 149
Query: 181 RHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------QVR 213
H+ QP + PG D P+ LV+APT EL Q Q+R
Sbjct: 150 VHVNAQPYLAPG-DGPIVLVLAPTRELAVQIQQESAKFGSSSKIKSTCIYGGAPKGPQIR 208
Query: 214 R------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI 261
GR+ID+L + TNL RVTYLVLDEADRM DMGFEPQI +IV I
Sbjct: 209 DLQRGVEIVIATPGRLIDMLEG---RHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQI 265
Query: 262 RPDRQAVLFSPTFPPRVEILARK--TNVCNLSI-ANSVRARGLDEKELELVINFDAPNDY 318
RPDRQ + +S T+P VE LA + + ++I ++S++A + +E+V NDY
Sbjct: 266 RPDRQTLYWSATWPKDVEQLANQFLHDPYKVTIGSSSLKANHSIAQHVEVV------NDY 319
Query: 319 EDY 321
E Y
Sbjct: 320 EKY 322
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + A V ARGLD K++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 382 KTGKSPIMTATDVAARGLDVKDIRYVINYDFPGSCEDYVHRIGRTGRAGAKGTAYTFFTV 441
Query: 341 ENAIYATDLV 350
NA +A +LV
Sbjct: 442 SNAKHARELV 451
>gi|254572992|ref|XP_002493605.1| Essential ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|238033404|emb|CAY71426.1| Essential ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|328354565|emb|CCA40962.1| ATP-dependent RNA helicase DDX5/DBP2 [Komagataella pastoris CBS
7435]
Length = 537
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/262 (38%), Positives = 133/262 (50%), Gaps = 54/262 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++T + A+RK+ D+ K PKPI ++ + G +L
Sbjct: 59 KFEKNFYNEHPDVTARTQEDVEAFRKEHDMNCYGKDIPKPITSFDEAGFPDYVLTAVKAQ 118
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+P AIQ + + G D V I TGSGKTL++ LP + HI QP + PG D PV L
Sbjct: 119 GFPSPTAIQCQGWPMALGGKDMVGIAATGSGKTLSYCLPAIVHINAQPLLKPG-DGPVAL 177
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR+ID+
Sbjct: 178 VLAPTRELAVQIQKECSKFGSSSRIRNTCVYGGVPKGQQIRDLARGAEIVIATPGRLIDM 237
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 238 LETGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKSVQA 294
Query: 281 LAR-------KTNVCNLSIANS 295
LAR + NV +L +A S
Sbjct: 295 LARDYLHDYIQVNVGSLELAAS 316
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARG+D K + V+N+D P + EDYVH ++ A F + NA A
Sbjct: 400 IMVATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAVSFFTNANARMA 459
Query: 347 TDLVKAFELSELVVRDDLKAV 367
DLV + + ++ +DL+A+
Sbjct: 460 DDLVPILKEANQIIPEDLQAM 480
>gi|323310025|gb|EGA63220.1| Prp5p [Saccharomyces cerevisiae FostersO]
Length = 849
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 174/351 (49%), Gaps = 58/351 (16%)
Query: 7 KQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS----HSASDYELFMKRA 62
++ P IE DPLD FM ++ + + G L ED D ++
Sbjct: 126 QKAPEHDIEKDPLDEFMTSLKEEKMSNSKGMYDRGDILDVEDQLFELGGTDDEDVEDNTD 185
Query: 63 KKKKRDKNREIIKSKIKIDY------QQLRKNFYTQAREITRMSPAYRKQL-----DLKI 111
+ K ++K Y + +K FY ++ ++ MS ++L ++KI
Sbjct: 186 NSNIAKIAKLKAKKRVKQIYYSPEELEPFQKKFYIESETVSSMSEMEVEELRLSLDNIKI 245
Query: 112 REKCAPKPIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSG 170
+ PKP+ W Q GL+T + + KL+ + IQ+ A I+SG D + I++TGSG
Sbjct: 246 KGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSG 305
Query: 171 KTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR------------- 214
KT+++LLP+LR + Q P+ + P+ L++APT EL + ++V +
Sbjct: 306 KTISYLLPLLRQVKAQRPLSKHETGPMCLILAPTRELALQIHEEVTKFTEADTSIRSVCC 365
Query: 215 ------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
GR ID+L N K+ + R+T++V+DEADR+FD+GF
Sbjct: 366 TGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGF 425
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
EPQIT+I++ +RPD+Q VLFS TFP ++ A V + I+ ++ ++G+
Sbjct: 426 EPQITQIMKTVRPDKQCVLFSATFPNKLRSFA--VRVLHSPISITINSKGM 474
>gi|358056966|dbj|GAA97125.1| hypothetical protein E5Q_03799 [Mixia osmundae IAM 14324]
Length = 480
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 139/263 (52%), Gaps = 54/263 (20%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + R ++ S A+R ++++ + PKP++++ + G IL K
Sbjct: 75 KFEKNFYVEDRRVSARSERDVDAFRAAKEIQVFGRGIPKPVESFSEAGFPDYILSEIKKA 134
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N P IQ+ A + +SG D VA++ TGSGKT+AF LP + HI QP + PG D P+ L
Sbjct: 135 NFPAPSPIQSQAWPMALSGRDLVAVSATGSGKTIAFSLPAMIHINAQPLLAPG-DGPIVL 193
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
+++PT EL Q Q+R GR+ID+
Sbjct: 194 ILSPTRELAVQTAAECTRFGASSKIRNTCVYGGAPKGGQIRDLQRGAEIVIATPGRLIDM 253
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 254 LESGK---TNLLRVTYLVMDEADRMLDMGFEPQIRKIVDQIRPDRQTLMFSATWPKEVQK 310
Query: 281 LAR-------KTNVCNLSIANSV 296
LA + NV +L ++ +V
Sbjct: 311 LASEYLRDFAQVNVGSLELSANV 333
>gi|393220991|gb|EJD06476.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 491
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 130/243 (53%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
++ KNFY + + R +R+ ++K+ + P+P+ T+ + G IL+T
Sbjct: 19 EKFEKNFYREDERVKARSDREIEEFRRLKEMKVSGRHVPRPVTTFEEAGFPDYILKTIHA 78
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P AIQ A + +SG D VAI +TGSGKT++F LP + HI QP ++PG D P+
Sbjct: 79 QGFTAPSAIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLMPG-DGPIA 137
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
L++APT EL Q Q+R GR+ID
Sbjct: 138 LILAPTRELAVQIQQECTKFGSNSKIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLID 197
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L + TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 198 ML---ETQKTNLLRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQ 254
Query: 280 ILA 282
LA
Sbjct: 255 KLA 257
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ K A+ F + ENA A +
Sbjct: 362 IATDVASRGLDVKDVGFVINYDFPNNCEDYIHRIGRTGRAGQKGIAYTFFTTENAKSARE 421
Query: 349 LV 350
LV
Sbjct: 422 LV 423
>gi|357126556|ref|XP_003564953.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like
[Brachypodium distachyon]
Length = 496
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 127/243 (52%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + + M+ AYR++ ++ + PKP+ +R G +L+ +K
Sbjct: 52 RFEKNFYVEVPSVAGMTADEVEAYRRRREITVDGHDVPKPVCDFRDVGFPEYVLQEITKA 111
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PG D P+ L
Sbjct: 112 GFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPG-DGPIVL 170
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q QVR GR+ID+
Sbjct: 171 VLAPTRELAVQIQQETTKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 230
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
+ + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S T+P VE
Sbjct: 231 IESHH---TNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQ 287
Query: 281 LAR 283
LAR
Sbjct: 288 LAR 290
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ A+ F +
Sbjct: 385 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGATGTAYTFFTA 444
Query: 341 ENAIYATDLV 350
NA +A DL+
Sbjct: 445 ANARFAKDLI 454
>gi|443896198|dbj|GAC73542.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 778
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/246 (39%), Positives = 126/246 (51%), Gaps = 47/246 (19%)
Query: 80 IDYQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
+D KNFY + A R YR + I+ + PKP+ ++ + G IL
Sbjct: 87 VDLVNFEKNFYIEDPRVAARSDREVQDYRASKQMTIQGQNVPKPVTSFDEAGFPDYILSE 146
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K+ P AIQ+ A + +SG D VAI ETGSGKT+ F LP + HI QP + PG D
Sbjct: 147 IKKMGFSEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMVHINAQPLLKPG-DG 205
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+ L++APT EL Q Q R GR
Sbjct: 206 PIALILAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKGPQTRDLQRGAEIVIATPGR 265
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID++ TNL RVTYLV+DEADRM DMGFEPQI +I+Q IRPDRQ ++FS T+P
Sbjct: 266 LIDMVDAGK---TNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPK 322
Query: 277 RVEILA 282
V+ LA
Sbjct: 323 EVQRLA 328
>gi|213406193|ref|XP_002173868.1| ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces japonicus
yFS275]
gi|212001915|gb|EEB07575.1| ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces japonicus
yFS275]
Length = 553
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 129/242 (53%), Gaps = 47/242 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + + S A +RK+ ++ + + P+PI T+ + G +L+ L
Sbjct: 86 FQKDFYKEHENVRLKSDAEIEQFRKEKEMVVIGENVPRPISTFEEAGFPNYVLKEVQALG 145
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
E+P IQ A + +SG D V I+ TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 146 FESPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLAPG-DGPIVLV 204
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR++D+L
Sbjct: 205 LAPTRELAVQIQQECTKFGHTSRIRNTCVYGGVPRGPQIRDLARGVEICIATPGRLLDML 264
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ V+FS T+P V+ L
Sbjct: 265 DSGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRL 321
Query: 282 AR 283
AR
Sbjct: 322 AR 323
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V +RG+D K + V NFD P + EDYVH ++ K A+ + ++
Sbjct: 420 RTGKSPIMVATDVASRGIDVKGITHVFNFDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTQ 479
Query: 341 ENAIYATDLV 350
EN+ A DL+
Sbjct: 480 ENSKQARDLI 489
>gi|443920520|gb|ELU40425.1| RNA helicase [Rhizoctonia solani AG-1 IA]
Length = 1719
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 131/242 (54%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + +++ S A +RKQ ++K++ + P+P+ T+ + G IL T
Sbjct: 1121 KFEKNFYREHPKVSARSDAEIADFRKQKEMKVQGRDIPRPVTTFEEAGFPDYILTTIKMQ 1180
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+P IQ A + +SG D VAI +TGSGKT++F LP + HI QP + PGD P+ L
Sbjct: 1181 GFTSPSPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLSPGD-GPIAL 1239
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 1240 VLAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLIDM 1299
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R+TYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 1300 L---ETGKTNLRRITYLVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKDVQK 1356
Query: 281 LA 282
LA
Sbjct: 1357 LA 1358
>gi|390595526|gb|EIN04931.1| RNA helicase [Punctularia strigosozonata HHB-11173 SS5]
Length = 434
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/251 (38%), Positives = 135/251 (53%), Gaps = 52/251 (20%)
Query: 80 IDYQ-----QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
+D+Q + KNFY + + ++ S +R+ ++K++ + P+PI ++ ++G
Sbjct: 46 VDWQSQALPKFEKNFYVEDKRVSARSEREIDEFRRVQEMKVQGRGVPRPITSFEESGFPE 105
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
I+ + P AIQ A + +SG D VAI +TGSGKTL+F LP + HI QP +
Sbjct: 106 YIMASLRAQGFSAPTAIQCQAWPMALSGRDLVAIAQTGSGKTLSFALPAMLHINAQPLLQ 165
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ LV+APT EL Q Q+R
Sbjct: 166 PG-DGPIALVLAPTRELAVQIQQECTKFGTNSRIRNTAIYGGAPKGPQIRDLQRGVEIVI 224
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L + TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS
Sbjct: 225 ATPGRLIDML---ETQKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFS 281
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 282 ATWPKDVQRLA 292
>gi|74354729|gb|AAI03319.1| DDX5 protein [Bos taurus]
Length = 671
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 89 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 148
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 149 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 208
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 209 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 267
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 268 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 323
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 324 DQIRPDRQTLMWSATWPKEVRQLA 347
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 453 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 512
Query: 349 LV 350
L+
Sbjct: 513 LI 514
>gi|440912672|gb|ELR62224.1| Putative ATP-dependent RNA helicase DDX5, partial [Bos grunniens
mutus]
Length = 671
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 89 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 148
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 149 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 208
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 209 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 267
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 268 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 323
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 324 DQIRPDRQTLMWSATWPKEVRQLA 347
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 453 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 512
Query: 349 LV 350
L+
Sbjct: 513 LI 514
>gi|326430393|gb|EGD75963.1| vasa [Salpingoeca sp. ATCC 50818]
Length = 873
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 171/354 (48%), Gaps = 63/354 (17%)
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKC 115
KR KK +D EI + +I+Y + FYT+ ++++++ A R+QL ++
Sbjct: 231 KRTFKKDKDPLGEI--NHDEINYPPFNRCFYTEHEDVSKLNSAEVRELRRQLGVEATGSG 288
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP ++ G +++ + P IQA A ++SG D + I ETGSGKT AF
Sbjct: 289 VPKPCVSFAYFGFDDVMMQLIQRQGFAQPTPIQAQAVPTVMSGRDVIGIAETGSGKTAAF 348
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR------------------ 214
+ PM++HI +QP + G D P+ +++APT EL + Q RR
Sbjct: 349 VWPMIKHILDQPDLKRG-DGPIAVLLAPTRELCMQISQNTRRYAKHYNIRVATVYGGGSR 407
Query: 215 ------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
GR+IDL+ K TNL RVTYLVLDEADRMFDMGF Q+
Sbjct: 408 YEQVKTLKDGCEVVVATPGRLIDLIKD---KATNLRRVTYLVLDEADRMFDMGFSLQVNS 464
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARKT--NVCNLSIANSVRARGLDEKELELVINFDA 314
I+ + RPDRQ +LF+ TF +VE LAR+ N + + +A E+ +E++ D
Sbjct: 465 IINHTRPDRQTLLFTATFKKKVEKLARQALRNPVRIVVGTVGKANTDIEQRVEIMQ--DT 522
Query: 315 PNDYEDYVHHCCQSWLKSCAFRFISEENA-IYATDLVKAFELSELVVRDDLKAV 367
+ + WLK+ S N ++ A L E +V +AV
Sbjct: 523 ASKW---------GWLKAHLVEMQSAGNVLVFVNKKADAETLHESMVAAGFQAV 567
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 4/97 (4%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKS 332
R E+L++ K + +A V ARGLD + V+NFDA + + H ++ +K
Sbjct: 578 RQEVLSKFKKQTVRILVATDVAARGLDIPSVRNVVNFDAAMSIDTHTHRIGRTGRAGVKG 637
Query: 333 CAFRFISEENAIYATDLVKAFELSELVVRDDLKAVAD 369
A+ + +A LV++ E + V D L +A+
Sbjct: 638 TAWTLLLPTETSFAAQLVESLEAASQRVSDALLHMAE 674
>gi|302812625|ref|XP_002987999.1| hypothetical protein SELMODRAFT_269342 [Selaginella moellendorffii]
gi|300144105|gb|EFJ10791.1| hypothetical protein SELMODRAFT_269342 [Selaginella moellendorffii]
Length = 505
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 158/303 (52%), Gaps = 56/303 (18%)
Query: 65 KKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPI 120
+K+D + ++ + + KNFY + + ++ +R++ D+ ++ + PKP+
Sbjct: 25 RKKDFDSMVLPKEQFDNLSPFEKNFYIEHPSVAALTDDEVVDFRRRKDITVQGRNVPKPV 84
Query: 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPML 180
+++ + +L+ K + P AIQA + + G D V + ETGSGKTLA+LLP +
Sbjct: 85 RSFAEASFPDYVLQEVLKAGFKEPTAIQAQGWPMALKGRDLVGLAETGSGKTLAYLLPAI 144
Query: 181 RHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------QVR 213
H+ QP + PG D P+ LV+APT EL Q Q+R
Sbjct: 145 VHVNAQPYLAPG-DGPIVLVLAPTRELAVQIQQESAKFGSSSKIKSTCIYGGAPKGPQIR 203
Query: 214 R------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI 261
GR+ID+L + TNL RVTYLVLDEADRM DMGFEPQI +IV I
Sbjct: 204 DLQRGVEIVIATPGRLIDMLEG---RHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQI 260
Query: 262 RPDRQAVLFSPTFPPRVEILARK--TNVCNLSI-ANSVRARGLDEKELELVINFDAPNDY 318
RPDRQ + +S T+P VE LA + + ++I ++S++A + +E+V NDY
Sbjct: 261 RPDRQTLYWSATWPKDVEQLANQFLHDPYKVTIGSSSLKANHSIAQHVEVV------NDY 314
Query: 319 EDY 321
E Y
Sbjct: 315 EKY 317
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + A V ARGLD K++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 377 KTGKSPIMTATDVAARGLDVKDIRYVINYDFPGSCEDYVHRIGRTGRAGAKGTAYTFFTV 436
Query: 341 ENAIYATDLV 350
NA +A +LV
Sbjct: 437 SNAKHARELV 446
>gi|74149390|dbj|BAE22450.1| unnamed protein product [Mus musculus]
Length = 615
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 135/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDE DRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEGDRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LVKAF-ELSELVVRDDLKAVAD 369
L+ E ++ + L++V D
Sbjct: 456 LISVLREANQAINPKLLQSVED 477
>gi|68075491|ref|XP_679664.1| ATP-dependent RNA helicase [Plasmodium berghei strain ANKA]
gi|56500462|emb|CAH94307.1| ATP-dependent RNA helicase, putative [Plasmodium berghei]
Length = 1312
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 131/250 (52%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQL-DLKIREKCAPKPIKTWRQTGLTTKIL 133
+IDY ++KN Y Q EIT M+ +RK ++ +R K P+PI+ + Q GL KIL
Sbjct: 522 EIDYLPIKKNVYVQVSEITNMTEKDVEMFRKNNGNIVVRGKNCPRPIQYFYQCGLPGKIL 581
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K N + +IQ A ++ G D +AI ETGSGKT+++L P++RH+ Q + +
Sbjct: 582 NILEKKNFKKMFSIQMQAIPALMCGRDIIAIAETGSGKTISYLFPLIRHVLHQDK-LRNN 640
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
D P+G+++ PT EL Q
Sbjct: 641 DGPIGIILTPTRELSIQVKNEASIYCKAVDLKILAVYGGSNIGAQLNVLKKGVEIIVGTP 700
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+ID+L + K+TNL R +++VLDEADR+ D+GFE QI I+ N R D+Q + S TF
Sbjct: 701 GRIIDILTISNSKVTNLNRASFIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISATF 760
Query: 275 PPRVEILARK 284
P ++ LA+K
Sbjct: 761 PNYIQNLAKK 770
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 37/202 (18%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
IA SV ARG+D K + LVIN++ P+ EDY+H ++ + A+ FI+ +
Sbjct: 871 IATSVMARGIDIKNIILVINYECPDHIEDYIHKIGRTGRSNNIGYAYTFIT------PNE 924
Query: 349 LVKAFELSELVVRD------------DLKAVADSFI-AKVNLGLGQVHGTGHGGVALNLM 395
KA+++ L+ + +L+ +A+ ++ +K+ G T +GG
Sbjct: 925 HTKAYDIYNLIKNNIYYINKTIDIPIELEHMANEYMNSKITEKDGNKLNTSNGGYKGKGF 984
Query: 396 ------KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDEGTR---KSGGDISHQDSIAKIA 446
K R++ K L K KE G E+K D ED + G R ++ G I+ +++ K
Sbjct: 985 KFTPNEKSRMQMDKDLAK---KELGLIEEKED-EDREAGYRSDMENDGKIN-SNTLNKTE 1039
Query: 447 TIAAASNSKASASTPSLISVAQ 468
I K + P I+ AQ
Sbjct: 1040 NITQTHEGKKIKNIPG-ITKAQ 1060
>gi|302308572|ref|NP_985521.2| AFL027Cp [Ashbya gossypii ATCC 10895]
gi|442570035|sp|Q754U8.2|PRP5_ASHGO RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|299790695|gb|AAS53345.2| AFL027Cp [Ashbya gossypii ATCC 10895]
Length = 855
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 135/244 (55%), Gaps = 46/244 (18%)
Query: 87 KNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSK-LN 140
KNFY + EI+++S R LD +++R + P+PI W Q GL + I+ ++ L
Sbjct: 236 KNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIMNLLTRELE 295
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQA A I+SG D + I++TGSGKT++F+LP+LR I Q P+ + P+GL+
Sbjct: 296 FTVPTPIQAQAIPAIMSGRDVIGISKTGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLI 355
Query: 201 MAPTGELVRQ------------------------QVRR----------------GRMIDL 220
++PT EL Q +++R GR IDL
Sbjct: 356 LSPTRELALQIHEEVTKFTSGDPSIRSLCCTGGSELKRQINDIKRGVEIVIATPGRFIDL 415
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N + N R+ ++V+DEADR+FD+GFEPQ+ +I++ IRPD+Q VLFS TFP +++
Sbjct: 416 LSLNSGNLINPKRIVFVVMDEADRLFDLGFEPQVNQIMKCIRPDKQCVLFSATFPNKLKS 475
Query: 281 LARK 284
A K
Sbjct: 476 FASK 479
>gi|148702365|gb|EDL34312.1| mCG2872, isoform CRA_b [Mus musculus]
gi|149054595|gb|EDM06412.1| ddx5 gene, isoform CRA_a [Rattus norvegicus]
Length = 406
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
>gi|374108750|gb|AEY97656.1| FAFL027Cp [Ashbya gossypii FDAG1]
Length = 855
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 135/244 (55%), Gaps = 46/244 (18%)
Query: 87 KNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSK-LN 140
KNFY + EI+++S R LD +++R + P+PI W Q GL + I+ ++ L
Sbjct: 236 KNFYQEPEEISKLSEEEVADLRLSLDNVQVRGRDCPRPILKWSQLGLNSGIMNLLTRELE 295
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQA A I+SG D + I++TGSGKT++F+LP+LR I Q P+ + P+GL+
Sbjct: 296 FTVPTPIQAQAIPAIMSGRDVIGISKTGSGKTVSFILPLLRQIKAQRPLGGDETGPLGLI 355
Query: 201 MAPTGELVRQ------------------------QVRR----------------GRMIDL 220
++PT EL Q +++R GR IDL
Sbjct: 356 LSPTRELALQIHEEVTKFTSGDPSIRSLCCTGGSELKRQINDIKRGVEIVIATPGRFIDL 415
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N + N R+ ++V+DEADR+FD+GFEPQ+ +I++ IRPD+Q VLFS TFP +++
Sbjct: 416 LSLNSGNLINPKRIVFVVMDEADRLFDLGFEPQVNQIMKCIRPDKQCVLFSATFPNKLKS 475
Query: 281 LARK 284
A K
Sbjct: 476 FASK 479
>gi|148230348|ref|NP_001079703.1| Probable ATP-dependent RNA helicase DDX5-like [Xenopus laevis]
gi|28838521|gb|AAH47981.1| MGC53795 protein [Xenopus laevis]
Length = 607
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 131/254 (51%), Gaps = 48/254 (18%)
Query: 73 IIKSKIKID-YQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTG 127
++K K +D + KNFY + +++R +P YR+ ++ +R PKP+ + +
Sbjct: 37 LMKKKWNLDELPKFEKNFYQELPDVSRRTPQECDQYRRSKEITVRGLNCPKPVLNFHEAS 96
Query: 128 LTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQP 187
++E +LN P IQ + +SGLD V + TGSGKTL++LLP + HI QP
Sbjct: 97 FPANVMEVIKRLNFTEPTPIQGQGWPVALSGLDMVGVAMTGSGKTLSYLLPGIVHINHQP 156
Query: 188 PVVPGDDSPVGLVMAPTGELVRQ---------------------------QVRR------ 214
+ G D P+ LV+APT EL +Q Q+R
Sbjct: 157 FLQRG-DGPILLVLAPTRELAQQVQQVAAEYGRACRLRTTCIYGGAPKGPQIRDLERGVE 215
Query: 215 ------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAV 268
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +
Sbjct: 216 ICIATPGRLIDFL---EAGKTNLNRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTL 272
Query: 269 LFSPTFPPRVEILA 282
++S T+P V LA
Sbjct: 273 MWSATWPKEVRQLA 286
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H ++ S A+ F + N D
Sbjct: 392 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSSKTGTAYTFFTPGNIKQVND 451
Query: 349 LV 350
LV
Sbjct: 452 LV 453
>gi|33096800|emb|CAE11890.1| hypothetical protein [Homo sapiens]
Length = 406
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRGKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
>gi|198470572|ref|XP_001355346.2| GA10556 [Drosophila pseudoobscura pseudoobscura]
gi|198145515|gb|EAL32403.2| GA10556 [Drosophila pseudoobscura pseudoobscura]
Length = 939
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 137/265 (51%), Gaps = 50/265 (18%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPK 118
++K ++ R ++K K + Q KNFY MS R++L++ + P
Sbjct: 177 REKAKNPGRNLVKPKWE-QLQPFPKNFYVIHPNTLNMSEQAVAELRRELEITVSGNDLPH 235
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + L +++ + P AIQ+ + +SG D V I +TGSGKTLA++LP
Sbjct: 236 PVANFEECSLPAHVIDEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLP 295
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR---------- 214
+ HI +QPP++ G + P+ LV+APT EL +Q ++R
Sbjct: 296 AIVHIGKQPPILRG-EGPIALVLAPTRELAQQIQSVVRDYGHLCQPEIRHTCIFGGSSKV 354
Query: 215 -----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
GR+ID L + TNL R TYLVLDEADRM DMGFEPQI +I
Sbjct: 355 PQARDLERGVEVIIATPGRLIDFLEN---RNTNLARCTYLVLDEADRMLDMGFEPQIRKI 411
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILA 282
++ IRPDRQ V++S T+P V+ LA
Sbjct: 412 IEQIRPDRQVVMWSATWPKEVQALA 436
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 543 SNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 600
Query: 343 AIYATDLVKAFE 354
A A +L+ E
Sbjct: 601 AKQARELISVLE 612
>gi|170595924|ref|XP_001902572.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158589680|gb|EDP28579.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 658
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 128/248 (51%), Gaps = 47/248 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
++Y KNFY + +I M+ R L+LK+ PKP+ + G ++
Sbjct: 91 VEYAPFNKNFYHEHEQIKSMTSIKVFELRNSLNLKVAGFNPPKPVTAFAHFGFDEALMNV 150
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E+P IQA + +SG D + I +TGSGKT+A+L P + HI +QP + G D
Sbjct: 151 IRKSEYEHPTPIQAQSIPAALSGRDVLGIAKTGSGKTVAYLWPAIIHIMDQPDLKEG-DG 209
Query: 196 PVGLVMAPTGEL---VRQQVRR------------------------------------GR 216
P+ LV+ PT EL V Q+ +R GR
Sbjct: 210 PISLVIVPTRELALQVYQEAKRYCKVYNINVVCAYGGGNKWEQQNALTEGAELVIATPGR 269
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDL+ N TN TRVT+LV DEADRMFDMGFE Q+ I +IRPDRQ ++FS TF
Sbjct: 270 IIDLVKINA---TNFTRVTFLVFDEADRMFDMGFEAQVQSISDHIRPDRQCLMFSATFKS 326
Query: 277 RVEILARK 284
+VE LAR+
Sbjct: 327 KVEKLARE 334
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAI 344
N+ +A V ARGLD E++ VINFD D + +VH ++ + A+ + E +
Sbjct: 431 ANILVATDVAARGLDIPEIKTVINFDLARDIDTHVHRIGRTGRAGQRGWAYTLVQESDKE 490
Query: 345 YATDLVKAFELSELVVRDDLKAVA 368
A LV+ E +V + L +A
Sbjct: 491 MAGHLVRNLESVNQIVPEPLLQLA 514
>gi|413955931|gb|AFW88580.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 768
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 145/283 (51%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y K+FY + I+ MS Y K L +++ P+PIK + G ++
Sbjct: 174 IEYDTFTKDFYEEKPSISGMSDQEVADYMKSLAIRVSGFDVPRPIKNFEDCGFPVPLMNA 233
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K ++ P IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 234 IAKQAYQKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEG 292
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 293 PIGVICAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEVVIATPGR 352
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDLL +K + R TYLVLDEADRMFD+GFEPQI IV IRP RQ +LFS T P
Sbjct: 353 LIDLLKMKALK---MFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPGRQTLLFSATMPY 409
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + I +V G ++++ V+N P+D E
Sbjct: 410 KVERLARE--ILTDPIRVTVGQVGGANEDIKQVVNV-IPSDAE 449
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+E L + K+ ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 503 RMETLQKFKSGTYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 562
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ A +A +LV++ EL +L ++D
Sbjct: 563 GTAYTLITQKEARFAGELVQSLIAAGQDVPNELMDLAMKD 602
>gi|45382259|ref|NP_990158.1| probable ATP-dependent RNA helicase DDX5 [Gallus gallus]
gi|5114446|gb|AAD40318.1|AF158370_1 DEAD-box RNA helicase [Gallus gallus]
Length = 595
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 133/263 (50%), Gaps = 48/263 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPK 118
KK + ++ K K +D + KNFY + ++ R + YR ++ +R PK
Sbjct: 20 KKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPK 79
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
PI + + ++E + N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 80 PIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 139
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 140 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQ 198
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 199 IRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 255
Query: 260 NIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 256 QIRPDRQTLMWSATWPKEVRQLA 278
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N D
Sbjct: 384 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVND 443
Query: 349 LV 350
L+
Sbjct: 444 LI 445
>gi|449478651|ref|XP_004177017.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX5 [Taeniopygia guttata]
Length = 608
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 133/263 (50%), Gaps = 48/263 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPK 118
KK + ++ K K +D + KNFY + ++ R + YR ++ +R PK
Sbjct: 32 KKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTAQEVEQYRASKEVTVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
PI + + ++E + N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 267
Query: 260 NIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 268 QIRPDRQTLMWSATWPKEVRQLA 290
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVND 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|62089424|dbj|BAD93156.1| Hypothetical protein DKFZp686J01190 variant [Homo sapiens]
Length = 457
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 83 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 142
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 143 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 202
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 203 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 261
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 262 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 317
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 318 DQIRPDRQTLMWSATWPKEVRQLA 341
>gi|326930919|ref|XP_003211585.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Meleagris
gallopavo]
Length = 597
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/263 (37%), Positives = 133/263 (50%), Gaps = 48/263 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPK 118
KK + ++ K K +D + KNFY + ++ R + YR ++ +R PK
Sbjct: 22 KKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGHNCPK 81
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
PI + + ++E + N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 82 PIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 141
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 142 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQ 200
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 201 IRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 257
Query: 260 NIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 258 QIRPDRQTLMWSATWPKEVRQLA 280
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N D
Sbjct: 386 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVND 445
Query: 349 LV 350
L+
Sbjct: 446 LI 447
>gi|195127173|ref|XP_002008043.1| GI12051 [Drosophila mojavensis]
gi|193919652|gb|EDW18519.1| GI12051 [Drosophila mojavensis]
Length = 797
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ +NFYT +I +++ R L +K+ PKP+ ++ G ++L+
Sbjct: 229 EIEYEPFERNFYTPHEDIAQLNEEQVRELRHTLGVKVSGAQPPKPVTSFGHFGFDDQLLK 288
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQA A +SG D + I +TGSGKT AF+ P+L H+ +Q + G D
Sbjct: 289 AVRKAEYTQPTPIQAQAVPAALSGRDIIGIAKTGSGKTAAFIWPLLTHLMDQRELRAG-D 347
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+GL++APT EL Q G
Sbjct: 348 GPIGLILAPTRELSLQIYNEAKKFGKVYNINVVCCYGGGSKWEQSKALEQGCEIVVATPG 407
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMID++ +K TNL RVT+LVLDEADRMF MGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 408 RMIDMV---KMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQTLLFSATFK 464
Query: 276 PRVEILAR 283
R+E LAR
Sbjct: 465 KRIERLAR 472
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I K C++ +A V ARGLD + V+N+D D + + H ++ K A+
Sbjct: 563 ITQFKRKECDILVATDVAARGLDIPHIRNVVNYDIARDIDTHTHRIGRTGRAGEKGNAYT 622
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+++++ +A LV+ E ++ V DDL +A
Sbjct: 623 LVTDKDKEFAGHLVRNLEGADQTVPDDLMELA 654
>gi|51263|emb|CAA46581.1| p68 RNA helicase [Mus musculus]
Length = 614
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 135/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 32 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 91
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 92 PVLNFYEANFPANVMDVIARHNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 151
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI P + G D P+ LV+APT EL +Q Q
Sbjct: 152 AIVHINHHPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 210
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 211 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 266
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 267 DQIRPDRQTLMWSATWPKEVRQLA 290
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 455
Query: 349 LV 350
L+
Sbjct: 456 LI 457
>gi|395533175|ref|XP_003768636.1| PREDICTED: probable ATP-dependent RNA helicase DDX5 [Sarcophilus
harrisii]
Length = 758
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + ++IK K ++ + KNFY + AR + YR+ ++ +R PK
Sbjct: 176 KKFGNPGEKLIKKKWNLEELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGHNCPK 235
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
PI + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 236 PILNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 295
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 296 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQ 354
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 355 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 410
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 411 DQIRPDRQTLMWSATWPKEVRQLA 434
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 540 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 599
Query: 349 LV 350
L+
Sbjct: 600 LI 601
>gi|226494636|ref|NP_001147596.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
gi|195612416|gb|ACG28038.1| pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Zea mays]
Length = 768
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/283 (35%), Positives = 145/283 (51%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y K+FY + I+ MS Y K L +++ P+PIK + G ++
Sbjct: 174 IEYDTFTKDFYEEKPSISGMSDQEVADYMKSLAIRVSGFDVPRPIKNFEDCGFPVPLMNA 233
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+K ++ P IQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++
Sbjct: 234 IAKQAYQKPTTIQCQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEG 292
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 293 PIGVICAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEVVIATPGR 352
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+IDLL +K + R TYLVLDEADRMFD+GFEPQI IV IRP RQ +LFS T P
Sbjct: 353 LIDLLKMKALK---MFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPGRQTLLFSATMPY 409
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + I +V G ++++ V+N P+D E
Sbjct: 410 KVERLARE--ILTDPIRVTVGQVGGANEDIKQVVNV-IPSDAE 449
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+E L + K+ ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 503 RMETLQKFKSGTYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 562
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ A +A +LV++ EL +L ++D
Sbjct: 563 GTAYTLITQKEARFAGELVQSLIAAGQDVPNELMDLAMKD 602
>gi|409078207|gb|EKM78570.1| hypothetical protein AGABI1DRAFT_100622 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 494
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 131/243 (53%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
++ KNFY + ++++ R +R+ ++K++ + P+PI ++ + G ++ +
Sbjct: 19 EKFEKNFYIEDKKVSARSDREIEEFRRTKEIKVQGRNVPRPISSFEEAGFPQYLMTSIRA 78
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+P IQ A + +SG D VAI +TGSGKT++F LP + HI QP + PG D P+
Sbjct: 79 QGFSSPTPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAPG-DGPIA 137
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
L++APT EL Q Q+R GR+ID
Sbjct: 138 LILAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIAIATPGRLID 197
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L TNL R+TYLVLDEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 198 MLESGK---TNLKRITYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKDVQ 254
Query: 280 ILA 282
LA
Sbjct: 255 KLA 257
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ LK ++ + + ENA A +
Sbjct: 362 IATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGLKGTSYTYFTTENAKAARE 421
Query: 349 LVKAFELSELVVRDDLKAVA 368
L+ ++ V+ L+ +A
Sbjct: 422 LINILREAKAVIPPQLEEMA 441
>gi|320166884|gb|EFW43783.1| DEAD/DEAH box helicase [Capsaspora owczarzaki ATCC 30864]
Length = 876
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 54/302 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I Y++ K+FY+ +I+ + P + R++L L++ P P ++ G + ++
Sbjct: 245 IQYREFEKDFYSAHSDISGLDPLEVDSLRRKLQLRVSGSNVPSPCVSFGHFGFDSPLMAA 304
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
SK + P IQA A + +SG D + I +TGSGKT AFL PML HI +Q + G +
Sbjct: 305 ISKHGYTQPTPIQAQAVPVGLSGRDIIGIAKTGSGKTAAFLWPMLVHIMDQDELDVG-EG 363
Query: 196 PVGLVMAPTGELVRQ----QVRRGRMIDL----------------LCKNGV--------- 226
P+G+++APT EL +Q + GR+ L + + GV
Sbjct: 364 PIGVIVAPTRELCQQIYNEATKFGRVYGLRVAAIYGGESKYEQSKVLQQGVEILVATPGR 423
Query: 227 -------KITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
K+TN+ R T+LVLDEAD+MF+MGFEPQ+ I+ IRPDRQ +LFS TF R+E
Sbjct: 424 LIEMLKDKLTNMLRATFLVLDEADKMFNMGFEPQVRSIINRIRPDRQTLLFSATFKKRIE 483
Query: 280 ILARK--TNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSCAFRF 337
LAR T+ + + + V D + ++++ +D E + SWL S F
Sbjct: 484 RLARDVLTDPVRIVVGD-VGEANQDVAQTAVILH----SDDEKF------SWLTSHIVEF 532
Query: 338 IS 339
+S
Sbjct: 533 MS 534
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KS 332
R I+A+ K + +A V ARGLD + V+NFD D + + H ++ K
Sbjct: 574 RNTIIAKFKRKAFPILVATDVAARGLDISHIRTVVNFDVARDIDTHTHRIGRTGRAGEKG 633
Query: 333 CAFRFISEENAIYATDLVKAFELSELVVRDDLKAVA 368
A+ +S ++A +A DLV+ FE + V L A+A
Sbjct: 634 SAYTLLSSKDASFAGDLVRNFESANQPVSPQLLALA 669
>gi|383852804|ref|XP_003701915.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Megachile
rotundata]
Length = 609
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 131/254 (51%), Gaps = 49/254 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
LRK+FY + + S +R+ ++ ++ P PI+ + + +LE K
Sbjct: 73 LRKDFYIEHPAVKNRSKEEVGQFRENAEITVKGDNIPNPIQHFEEGNFPPYVLEVIHKQG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P AIQA + +SG D VAI +TGSGKTL ++LP + HI QP + PG D PV L+
Sbjct: 133 YSQPTAIQAQGWPIALSGKDLVAIAQTGSGKTLGYILPAIVHIIHQPRLSPG-DGPVALI 191
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q VR GR+ID L
Sbjct: 192 LAPTRELAQQIQEVANCFGESSGVRNTCIFGGAPKGPQAHDLERGVEICIATPGRLIDFL 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 252 ERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRAL 308
Query: 282 ARK--TNVCNLSIA 293
A T+ +L+I
Sbjct: 309 AEDFLTDYMHLNIG 322
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD +++ VINFD P+ EDY+H ++ + A+ F + N +A D
Sbjct: 415 VATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHAGD 474
Query: 349 LVKAF 353
L++
Sbjct: 475 LIEVL 479
>gi|395324055|gb|EJF56503.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 487
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 127/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY + + +T R +RK ++K++ + P+P+ ++ + G I+ T
Sbjct: 20 HFEKNFYVEDKRVTARSDREIEEFRKLKEMKVQGRNVPRPVTSFDEIGFPEYIMSTIRAQ 79
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
NP IQ A + +SG D VAI +TGSGKT++F LP + HI QP + G D P+ L
Sbjct: 80 GFPNPTPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLTAG-DGPIAL 138
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 139 ILAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLIDM 198
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 199 LESGK---TNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQK 255
Query: 281 LA 282
LA
Sbjct: 256 LA 257
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ + ++ + + +NA A +
Sbjct: 362 IATDVASRGLDVKDVRYVINYDFPNNCEDYIHRIGRTGRAGMTGTSYTYFTTDNAKQARE 421
Query: 349 LV 350
L+
Sbjct: 422 LI 423
>gi|336383448|gb|EGO24597.1| hypothetical protein SERLADRAFT_449372 [Serpula lacrymans var.
lacrymans S7.9]
Length = 487
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 131/243 (53%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
++ KNFY + + ++ S +R+ ++K++ + P+P+ ++ + G I+ +
Sbjct: 19 ERFEKNFYVEDKRVSSRSERDIDEFRRSKEIKVQGRGVPRPVSSFDEAGFPEYIMSSILA 78
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+P IQ A + +SG D VAI +TGSGKT++F LP + HI QP + PG D P+
Sbjct: 79 QGFSSPTPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAPG-DGPIA 137
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL Q Q+R GR+ID
Sbjct: 138 LVLAPTRELAVQIQQECTKFGSSSRIRNTAIYGGAPKGPQIRDLQRGVEVVIATPGRLID 197
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L + TNL R+TYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 198 ML---ETQKTNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQ 254
Query: 280 ILA 282
LA
Sbjct: 255 KLA 257
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ +K ++ + + +NA A +
Sbjct: 362 IATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTSYTYFTTDNAKSARE 421
Query: 349 LV 350
L+
Sbjct: 422 LI 423
>gi|301101090|ref|XP_002899634.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262103942|gb|EEY61994.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 456
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 138/260 (53%), Gaps = 49/260 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
+ Y+ RK+FY+ E + R +LD+++ P P++++ GL K+L+T
Sbjct: 17 VTYEPFRKSFYSAHSETCALKAQEVANLRSELDVRVDGVDVPAPVRSFMHLGLDRKMLQT 76
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
KL E P AIQ A + +SG D + I +TGSGKTLAF LPM+RH+ +Q + G +
Sbjct: 77 LMKLGLEAPTAIQTQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVRHVMDQRELQRG-EG 135
Query: 196 PVGLVMAPTGELVRQ---QVRR------------------------------------GR 216
P+ LV+APT EL Q Q ++ GR
Sbjct: 136 PIALVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGR 195
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+I+++ K K + RVT++VLDEADRMF+MGFEPQ+ ++ +RPDRQ ++FS TF
Sbjct: 196 LIEMIRK---KAAPMNRVTFVVLDEADRMFEMGFEPQLRSVMGQVRPDRQILMFSATFRR 252
Query: 277 RVEILARK--TNVCNLSIAN 294
R+E LA TN L++
Sbjct: 253 RIETLALDVLTNPVKLTVGQ 272
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-------CQS 328
R E L + K C + +A V ARGLD K+++ V+NFD + +VH +
Sbjct: 348 RAEALTKFKHGACRVLVATDVAARGLDVKDVKNVVNFDVAKSIDTHVHRIGRTGRMGLEG 407
Query: 329 WLKSCAFRFISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+ A+ ++ + +A LV ++S V +L A+A
Sbjct: 408 FEPGTAYTLVTRNESQFAAQLVYNMDVSGQSVSAELLALA 447
>gi|302318882|ref|NP_001032894.2| ATP-dependent RNA helicase DDX42 [Danio rerio]
Length = 908
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 131/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EI+ ++ A R++L+LK+ PKP ++ G +++
Sbjct: 209 EIDYSPFEKNFYNEHEEISSLTGAEVVELRRKLNLKVSGAAPPKPATSFAHFGFDEQLMH 268
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D++ I +TGSGKT AF+ P+L HI +Q + PG +
Sbjct: 269 QIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEPG-E 327
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 328 GPIAVIVCPTRELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 387
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K T+L RVT+LV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 388 RLIDHVKK---KATSLQRVTFLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 444
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 445 KKIEKLAR 452
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD + V+N+D D + + H ++ K A+ ++ ++ +A D
Sbjct: 555 VATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTTKDTSFAGD 614
Query: 349 LVKAFELSELVVRDDLKAVA 368
LV+ E + V DL +A
Sbjct: 615 LVRNLEGANQSVSKDLLDLA 634
>gi|432871168|ref|XP_004071866.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Oryzias
latipes]
Length = 624
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY Q ++ R SP YR+ + ++ + P PI + + + ++E +K
Sbjct: 61 KFEKNFYQQHADVARRSPQEVEQYRRTKVITVKGRECPNPITHFHEASFPSYVMEVINKQ 120
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N P IQA L +SG D V I +TGSGKTL++LLP + HI QP + G D P+ L
Sbjct: 121 NWTEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERG-DGPICL 179
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 180 VLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 239
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 240 LESGK---TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 296
Query: 281 LA 282
LA
Sbjct: 297 LA 298
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN+ EDY+H ++ S A+ F + N A+D
Sbjct: 404 IATDVASRGLDVEDVKFVINYDYPNNSEDYIHRIGRTARSSKTGTAYTFFTANNMRQASD 463
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+ + + L +A+
Sbjct: 464 LIAVLREANQAINPKLLQMAE 484
>gi|410918227|ref|XP_003972587.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Takifugu
rubripes]
Length = 638
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 129/243 (53%), Gaps = 49/243 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFYT+ E+ RMS +R++ ++ IR PK I + Q +++ +
Sbjct: 53 KFEKNFYTEHPEVQRMSQYEMEEFRRKKEITIRGSGCPKAILAFHQAQFPQYVIDVLVQQ 112
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N + P AIQ+ + +SG D V I +TGSGKTLA+LLP + HI QP GD P+ L
Sbjct: 113 NFKEPTAIQSQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYPERGD-GPIVL 171
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 172 VLAPTRELAQQVQQVAFDYGKCSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDF 231
Query: 221 L-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L C+ TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V
Sbjct: 232 LECEK----TNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVR 287
Query: 280 ILA 282
LA
Sbjct: 288 QLA 290
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A D
Sbjct: 396 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARD 455
Query: 349 LVKAFELSELVVRDDLKAVADS 370
LV+ E + + L+ + DS
Sbjct: 456 LVRVLEEARQAINPKLRQLVDS 477
>gi|449275532|gb|EMC84365.1| putative ATP-dependent RNA helicase DDX5 [Columba livia]
Length = 596
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 132/263 (50%), Gaps = 48/263 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + ++ K K +D + KNFY + AR + YR ++ +R PK
Sbjct: 21 KKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVARRTVQEVEQYRASKEVTVRGHNCPK 80
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
PI + + ++E + N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 81 PIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 140
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 141 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKGPQ 199
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 200 IRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 256
Query: 260 NIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 257 QIRPDRQTLMWSATWPKEVRQLA 279
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N D
Sbjct: 385 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVND 444
Query: 349 LV 350
L+
Sbjct: 445 LI 446
>gi|256052028|ref|XP_002569581.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646171|emb|CCD59155.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 840
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 129/247 (52%), Gaps = 47/247 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I+Y KNFY + EI+ + A R +L L++ +P+ ++ GL ++E
Sbjct: 252 INYAPFAKNFYVEHVEISSLDEAGVDSLRSKLGLRVSGPSPLRPVCSFAHLGLDEPLMEA 311
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K + P IQA A LI++G D + I +TGSGKT AFL P++ HI +QP + G D
Sbjct: 312 IRKAGYTQPTPIQAQAVPLILAGRDVIGIGKTGSGKTAAFLWPLIIHIMDQPELKLG-DG 370
Query: 196 PVGLVMAPTGELVRQQVRR---------------------------------------GR 216
P+G++ APT EL Q GR
Sbjct: 371 PIGVICAPTRELALQIYSEAKKLAKVYNLTVVCAYGGGSLWEQQKACEAGCEILVCTPGR 430
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID++ K K TNL RVTYLV DEAD+MF++GFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 431 LIDIVKK---KSTNLRRVTYLVFDEADKMFNLGFEPQVRSIANHVRPDRQTLLFSATFKR 487
Query: 277 RVEILAR 283
R+E LAR
Sbjct: 488 RLERLAR 494
>gi|387018192|gb|AFJ51214.1| putative ATP-dependent RNA helicase DDX5-like [Crotalus adamanteus]
Length = 600
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 134/263 (50%), Gaps = 48/263 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPK 118
KK + ++ K K +D + KNFY + ++ R + YR ++ ++ PK
Sbjct: 28 KKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVARRAMQEIEQYRASKEITVKGHNCPK 87
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + ++E + N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 88 PVMNFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 147
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 148 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYGRACRLKSTCIYGGAPKGPQ 206
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV+
Sbjct: 207 IRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVE 263
Query: 260 NIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 264 QIRPDRQTLMWSATWPKEVRQLA 286
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 392 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 451
Query: 349 LV 350
L+
Sbjct: 452 LI 453
>gi|355683365|gb|AER97083.1| DEAD box polypeptide 5 [Mustela putorius furo]
Length = 448
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/264 (37%), Positives = 136/264 (51%), Gaps = 50/264 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPK 118
KK + +++K K +D + KNFY + AR + YR+ ++ +R PK
Sbjct: 74 KKFGNPGEKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPK 133
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + +++ ++ N P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 134 PVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 193
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 194 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ 252
Query: 212 VRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
+R GR+ID L C TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 253 IRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIV 308
Query: 259 QNIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 309 DQIRPDRQTLMWSATWPKEVRQLA 332
>gi|384245963|gb|EIE19455.1| DEAD-domain-containing protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 561
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/334 (31%), Positives = 167/334 (50%), Gaps = 60/334 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
++Y+ K FY + +T M+ A R ++ +++ APKP++T+ Q G ++
Sbjct: 115 VEYEDFAKVFYDEHPAMTAMTHAEVTALRARVGIRVSGFDAPKPVQTFEQCGFDGMLMGV 174
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K ++ P IQA A ++G D + I +TGSGKT AF+LPML HI +QP + G +
Sbjct: 175 IKKAGYQKPTPIQAQALPAALAGRDILGIAKTGSGKTAAFVLPMLVHIMDQPELEKG-EG 233
Query: 196 PVGLVMAPTGEL---VRQQVRR------------------------------------GR 216
P+G+++APT EL + ++ RR GR
Sbjct: 234 PIGIIVAPTRELSEQIHKETRRFSKPYNLRVCAAFGGLSKYDQFKDLKAGAEVAVCTPGR 293
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MIDL+ +K TRVTYLV DEADRMFDMGFEPQ+ I+ +RPDRQ +LFS T P
Sbjct: 294 MIDLI---KMKACMCTRVTYLVFDEADRMFDMGFEPQVRSIIGQVRPDRQTLLFSATLPN 350
Query: 277 RVEILARKTNVCNLSIA-NSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSCAF 335
+++ L + + + + A D ++ V++ A +WL++
Sbjct: 351 KIDRLVQDALTSPVRVTVGEIGAANDDISQVAEVLDDSAK-----------WTWLQANVQ 399
Query: 336 RFISEENA-IYATDLVKAFELSELVVRDDLKAVA 368
FI + + ++ + V+A E+S + LKA A
Sbjct: 400 SFIDQGDVLVFVSTKVRAEEISGQLQAAGLKAAA 433
>gi|194387478|dbj|BAG60103.1| unnamed protein product [Homo sapiens]
Length = 603
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 126/241 (52%), Gaps = 49/241 (20%)
Query: 86 RKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNH 141
+KNFY + AR + YR+ ++ +R PKP+ + + +++ ++ N
Sbjct: 44 KKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNF 103
Query: 142 ENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVM 201
P AIQA + +SGLD V + +TGSGKTL++LLP + HI QP + G D P+ LV+
Sbjct: 104 TEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERG-DGPICLVL 162
Query: 202 APTGELVRQ---------------------------QVRR------------GRMIDLL- 221
APT EL +Q Q+R GR+ID L
Sbjct: 163 APTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLE 222
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
C TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V L
Sbjct: 223 CGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 278
Query: 282 A 282
A
Sbjct: 279 A 279
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 385 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 444
Query: 349 LV 350
L+
Sbjct: 445 LI 446
>gi|70938627|ref|XP_739964.1| ATP-dependent RNA helicase [Plasmodium chabaudi chabaudi]
gi|56517342|emb|CAH87733.1| ATP-dependent RNA helicase, putative [Plasmodium chabaudi chabaudi]
Length = 506
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 89/251 (35%), Positives = 133/251 (52%), Gaps = 47/251 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQL-DLKIREKCAPKPIKTWRQTGLTTKIL 133
+IDY ++KN Y Q EIT M+ +RK ++ +R K P+PI+ + Q GL KIL
Sbjct: 25 EIDYLPIKKNVYVQVSEITNMTDKDVEMFRKNNGNIVVRGKNCPRPIQYFYQCGLPGKIL 84
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K N + +IQ A ++ G D +AI ETGSGKT+++L P++RH+ Q + +
Sbjct: 85 NILEKKNFKKMFSIQMQAIPALMCGRDIIAIAETGSGKTISYLFPLIRHVLHQDK-LRNN 143
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
D P+G+++ PT EL QV+
Sbjct: 144 DGPIGIILTPTREL-SIQVKNEASIYCKAVDLKILAVYGGSNIGAQLNVLKKGVEIIVGT 202
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID+L + K+TNL R +++VLDEADR+ D+GFE QI I+ N R D+Q + S T
Sbjct: 203 PGRIIDILTISNSKVTNLNRASFIVLDEADRLLDLGFESQIHSILNNCRKDKQTAMISAT 262
Query: 274 FPPRVEILARK 284
FP ++ LA+K
Sbjct: 263 FPNYIQNLAKK 273
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 9/71 (12%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
IA SV ARG+D K + LVIN++ P+ EDY+H ++ + A+ FI+ T+
Sbjct: 374 IATSVMARGIDIKNIILVINYECPDHIEDYIHKIGRTGRSNNIGYAYTFIT------PTE 427
Query: 349 LVKAFELSELV 359
KA+++ L+
Sbjct: 428 HTKAYDIYNLI 438
>gi|409048419|gb|EKM57897.1| hypothetical protein PHACADRAFT_251816 [Phanerochaete carnosa
HHB-10118-sp]
Length = 506
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/251 (37%), Positives = 133/251 (52%), Gaps = 52/251 (20%)
Query: 80 IDYQQLR-----KNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
ID+ Q + KNFY + + ++ R +R+ ++K++ + P+P+ ++ + G
Sbjct: 36 IDWNQYKLERFEKNFYVEDKRVSARSDREIEDFRRIKEMKVQGRDVPRPVSSFDEVGFPE 95
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
++ T P IQ A + +SG D VAI++TGSGKT+AF LP + HI QP +
Sbjct: 96 YLMSTIRAQGFAAPTPIQCQAWPMALSGHDVVAISQTGSGKTIAFALPAMLHINAQPLLA 155
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ L++APT EL Q Q+R
Sbjct: 156 PG-DGPIALILAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVI 214
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL R+TYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS
Sbjct: 215 ATPGRLIDMLESGK---TNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFS 271
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 272 ATWPKDVQKLA 282
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ V+N+D PN+ EDY+H ++ +K ++ + + +NA A +
Sbjct: 387 IATDVASRGLDVKDVGYVVNYDFPNNCEDYIHRIGRTGRAGMKGTSYTYFTTDNAKSARE 446
Query: 349 LV 350
L+
Sbjct: 447 LI 448
>gi|255713670|ref|XP_002553117.1| KLTH0D09328p [Lachancea thermotolerans]
gi|238934497|emb|CAR22679.1| KLTH0D09328p [Lachancea thermotolerans CBS 6340]
Length = 551
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 132/262 (50%), Gaps = 54/262 (20%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + + S A +RK ++ I K PKPI T+ + G +L
Sbjct: 70 KFEKNFYVEHESVRNRSDAEVEEFRKANEMSILGKDIPKPITTFDEAGFPEYVLSEVKAE 129
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P IQ + +SG D + + TGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 130 GFEKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPIVL 188
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 189 VLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGVPRGHQIRELTRGAEIVIATPGRLIDM 248
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 249 LE---IGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQ 305
Query: 281 LAR-------KTNVCNLSIANS 295
LAR + NV +L +A S
Sbjct: 306 LARDYLHDPIQVNVGSLELAAS 327
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V ARG+D K + VIN+D P + EDYVH ++ A F +E
Sbjct: 405 RTGNSPIMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTE 464
Query: 341 ENAIYATDLV 350
N L+
Sbjct: 465 ANKGMGAQLI 474
>gi|124506095|ref|XP_001351645.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
gi|23504573|emb|CAD51452.1| ATP-dependent RNA Helicase, putative [Plasmodium falciparum 3D7]
Length = 1490
Score = 154 bits (390), Expect = 7e-35, Method: Composition-based stats.
Identities = 92/270 (34%), Positives = 146/270 (54%), Gaps = 51/270 (18%)
Query: 59 MKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQL-DLKIRE 113
MK+ KK + N + +IDY ++KN Y Q +EIT M + +RK ++ +R
Sbjct: 662 MKKMNKKLLEVNHD------EIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRG 715
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K P+P++ + Q GL +KIL+ K N + IQ ++ G D +AI ETGSGKTL
Sbjct: 716 KNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTL 775
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL-------------------------- 207
++L P++RH+ Q P + +D P+ +++ PT EL
Sbjct: 776 SYLFPVIRHVLHQEP-LRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGS 834
Query: 208 -VRQQVR------------RGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
+ +Q++ GR+ID+L + K+TNL RV+++VLDEADR+ D+GFE QI
Sbjct: 835 NIARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQI 894
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
I++N R D+Q + S TFP ++ +A+K
Sbjct: 895 YNILRNCRKDKQTAMISATFPNYIQNMAKK 924
Score = 40.8 bits (94), Expect = 1.7, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH 323
IA SV ARG+D K + LVIN+ P+ EDY+H
Sbjct: 1025 IATSVMARGIDIKNIILVINYQCPDHIEDYIH 1056
>gi|410926900|ref|XP_003976906.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Takifugu
rubripes]
Length = 632
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 128/243 (52%), Gaps = 49/243 (20%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ +KNFY + + +R P YR+ ++ ++ + PKPI + + + ++E SK
Sbjct: 54 KFQKNFYQEHPDTSRRPPQEIEQYRRSKEVTVKGRDCPKPILKFHEAAFPSYVMEVISKQ 113
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N +P IQ+ + + G D V I +TGSGKTLA+LLP + HI QP + G D P+ L
Sbjct: 114 NWTDPTPIQSQGWPVALGGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHG-DGPICL 172
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 173 VLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 232
Query: 221 L-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L C TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 233 LECGK----TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 288
Query: 280 ILA 282
LA
Sbjct: 289 QLA 291
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N A D
Sbjct: 397 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAGD 456
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+ + + L +A+
Sbjct: 457 LISVLREANQAINPKLMQMAE 477
>gi|384486962|gb|EIE79142.1| hypothetical protein RO3G_03847 [Rhizopus delemar RA 99-880]
Length = 541
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/263 (36%), Positives = 138/263 (52%), Gaps = 54/263 (20%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY++ ++ + +P A R + + PKPIK + + + +++ ++L
Sbjct: 181 KFEKNFYSEHPQVAQRTPEEVEAIRAAASMTVTGYGVPKPIKAFEEANFPSYVMQELAQL 240
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+P IQ+ + +SG D V + ETGSGKTLA+ LP + HI QP + PG D P+ L
Sbjct: 241 GFPSPTPIQSQGWPMALSGRDVVGVAETGSGKTLAYTLPAIVHINAQPLLQPG-DGPIVL 299
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL +R+Q + GR+ID+
Sbjct: 300 ILAPTRELAVQIREQCDKFGATSRIKNTCLYGGTPRGPQIRDLVKGVEICIATPGRLIDM 359
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P VE
Sbjct: 360 LEAGK---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVNQIRPDRQTLMWSATWPKTVER 416
Query: 281 LAR-------KTNVCNLSIANSV 296
LA + V +LS++ S+
Sbjct: 417 LAHQYLKDYIQVTVGSLSLSASI 439
>gi|356513635|ref|XP_003525517.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Glycine
max]
Length = 599
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 98/252 (38%), Positives = 129/252 (51%), Gaps = 50/252 (19%)
Query: 79 KIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D++ L KNFY + + MS YR ++ ++ PKP++ + +
Sbjct: 119 KQDFKNLVPFEKNFYVECPAVRAMSEQEVLHYRASREITVQGNDVPKPVRMFHEANFPDY 178
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
LE + L P IQA + + G D + I ETGSGKTL++LLP L H+ QP +
Sbjct: 179 CLEVIANLGFAEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPALVHVNAQPRLAH 238
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ LV+APT EL Q Q+R
Sbjct: 239 G-DGPIVLVLAPTRELAVQIQEEALKFGSRANKRSTCIYGGAPKGPQIRELKRGVEIVIA 297
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +L+S
Sbjct: 298 TPGRLIDML---EAQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLLWSA 354
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 355 TWPREVETLARQ 366
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P+ EDYVH ++ K A+ F +
Sbjct: 460 KSGRSPIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGAKGTAYTFFTH 519
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAV 367
NA +A DL+K + + VV L A+
Sbjct: 520 ANAKFARDLIKILQDAGQVVSPALSAL 546
>gi|156094444|ref|XP_001613259.1| ATP-dependent RNA helicase [Plasmodium vivax Sal-1]
gi|148802133|gb|EDL43532.1| ATP-dependent RNA helicase, putative [Plasmodium vivax]
Length = 1341
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 143/260 (55%), Gaps = 46/260 (17%)
Query: 70 NREIIK-SKIKIDYQQLRKNFYTQAREITRMSPA----YRKQL-DLKIREKCAPKPIKTW 123
N+++++ ++ +++Y ++KN Y Q EIT M + +RK ++ +R K P+P++ +
Sbjct: 612 NKKLLQVNRDQVEYLPIKKNIYVQVSEITNMKESDVDLFRKNNGNIIVRGKNCPRPVQYF 671
Query: 124 RQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHI 183
Q GL +KIL + + IQ ++ G D +AI ETGSGKTL++L P++RH+
Sbjct: 672 YQCGLPSKILPILERKQFKKMFGIQMQTIPALMCGRDVIAIAETGSGKTLSYLFPLIRHV 731
Query: 184 WEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------------QVR 213
QPP+ +D P+ +++ PT EL +Q ++
Sbjct: 732 LHQPPLR-NNDGPIAIILTPTRELSKQVKSEARPYCQAVNLRILAVYGGSNIGTQLNTLK 790
Query: 214 R---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPD 264
R GR+ID+L + K+TNL RV+++VLDEADR+ D+GFE QI I+ N R D
Sbjct: 791 RGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIHNILNNCRKD 850
Query: 265 RQAVLFSPTFPPRVEILARK 284
+Q + S TFP ++ LA+K
Sbjct: 851 KQTAMISATFPNYIQNLAKK 870
>gi|328852836|gb|EGG01979.1| hypothetical protein MELLADRAFT_78893 [Melampsora larici-populina
98AG31]
Length = 537
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 99/263 (37%), Positives = 135/263 (51%), Gaps = 54/263 (20%)
Query: 84 QLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + +T R YRK +++I K PKP+ + + G I+ K
Sbjct: 66 RFEKNFYEEDPRVTGRSDREIDQYRKDKEIQIFGKNIPKPVSNFSEAGFPDYIMAEIRKA 125
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ A + +SG D VAI+ TGSGKT+AF LP + HI QP + PGD P+ L
Sbjct: 126 GFTEPSPIQCQAWPMALSGRDVVAISATGSGKTIAFSLPAMIHINAQPLLAPGD-GPIVL 184
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
++APT EL QQ+R GR+ID+
Sbjct: 185 ILAPTRELAVQIQGECTKFGASSRIRNTCVYGGVPKGQQIRDLSRGAEIVIATPGRLIDM 244
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLV+DEADRM DMGFEPQI +I++ IRPDRQ ++FS T+P ++
Sbjct: 245 LES---RRTNLQRVTYLVMDEADRMLDMGFEPQIKKILEQIRPDRQTLMFSATWPKEIQR 301
Query: 281 LAR-------KTNVCNLSIANSV 296
LA + NV +L + +V
Sbjct: 302 LANEYLKDFIQVNVGSLELTANV 324
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + IA V +RGLD K++ VIN+D PN EDY+H ++ A+ +IS
Sbjct: 400 KSGRSPIMIATDVASRGLDVKDVAYVINYDMPNGIEDYIHRIGRTGRAGRTGTAYSYISA 459
Query: 341 ENAIYATDLVKAFELSELVV 360
+ A +LVK + ++ VV
Sbjct: 460 DQGKLARELVKILQDAKQVV 479
>gi|403218429|emb|CCK72919.1| hypothetical protein KNAG_0M00660 [Kazachstania naganishii CBS
8797]
Length = 884
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 173/347 (49%), Gaps = 66/347 (19%)
Query: 9 LPVVQIEIDPLDAFMNDMECSFAEHPN--NCFRLGRRLPAED-------SHSASDYELFM 59
LP + DPLD+FM ++ + P+ + R L A++ D E M
Sbjct: 175 LPQQHDKEDPLDSFMESLQNE-EQIPDATDLTRASVDLDADELDQNTIEEDETVDEESGM 233
Query: 60 KRAKKKKRDKNREIIKSKIKIDY-----QQLRKNFYTQAREITRMSPAYRKQL-----DL 109
+ +K K K + +++ + +DY + + K+ Y + + +S +L ++
Sbjct: 234 QESKLKTIAKAK-LLRKVLGVDYTTMELEHINKSLYHEPESLKNLSQEDMVELRFSLGNI 292
Query: 110 KIREKCAPKPIKTWRQTGLTT---KILETFSKLNHENPVAIQAPASALIISGLDSVAITE 166
K++ + PKP W Q GL T ++E K + P IQA A I+SG D + I++
Sbjct: 293 KVKGENCPKPATRWSQLGLDTSKMNLIENVFKFDSLTP--IQAQALPAIMSGRDVIGISK 350
Query: 167 TGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR--------- 214
TGSGKT+++LLP+LRHI Q P+ + P+ L++APT EL + Q+ R
Sbjct: 351 TGSGKTISYLLPLLRHIKAQRPLSKNETGPLALIIAPTRELALQIYQETLRFLDSDKSLR 410
Query: 215 ----------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246
GR IDLL N K+ + +++++VLDEADR+F
Sbjct: 411 AICCTGGSQLKTQINDLKRGTEIVVATPGRFIDLLTMNSGKLISSKKISFVVLDEADRLF 470
Query: 247 DMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIA 293
DMGFEPQ+T+I++ IRPD+Q VLFS TFP ++ A + LSI
Sbjct: 471 DMGFEPQVTQIMKTIRPDKQCVLFSATFPNKLRNFAMRVLKSPLSIT 517
>gi|260948952|ref|XP_002618773.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238848645|gb|EEQ38109.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 126/243 (51%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFYT+ ++ S A+RK+ D+ + + PKPI ++ + G +L +
Sbjct: 63 KFEKNFYTEHPDVAARSDAEVAAFRKEHDMTVEGQDIPKPITSFEEAGFPDYVLSEVKQQ 122
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ + SG D V I TGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 123 GFPKPTAIQCQGWPMASSGRDMVGIASTGSGKTLSYCLPAIVHINAQPLLKPG-DGPIVL 181
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
++APT EL QQVR GR+ID+
Sbjct: 182 ILAPTRELAVQIQTECSKFGSSSRIRNTCIYGGAPKGQQVRDLARGVEICIATPGRLIDM 241
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 242 LETNK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKN 298
Query: 281 LAR 283
L R
Sbjct: 299 LTR 301
>gi|356562686|ref|XP_003549600.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Glycine
max]
Length = 602
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/252 (39%), Positives = 129/252 (51%), Gaps = 50/252 (19%)
Query: 79 KIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D++ L KNFY + + MS YR ++ ++ PKPI + +
Sbjct: 129 KQDFKNLVPFEKNFYVECPAVRAMSEQEVLHYRASREITVQGNDVPKPIMMFHEANFPDY 188
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
LE + L +P IQA + + G D + I ETGSGKTLA+LLP L H+ QP +
Sbjct: 189 CLEVIANLRFADPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVNAQPRLAH 248
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ LV+APT EL Q Q+R
Sbjct: 249 G-DGPIVLVLAPTRELAVQIQEEALKFGSRANKRSTCIYGGAPKGPQIRELKRGVEIVIA 307
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +L+S
Sbjct: 308 TPGRLIDML---EAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLLWSA 364
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 365 TWPRDVETLARQ 376
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 470 KSGRSPIMTATDVAARGLDVKDIKCVINYDFPTSLEDYVHRIGRTGRAGAKGTAYTFFTH 529
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADS 370
NA +A DL+K + + V L A+ S
Sbjct: 530 ANAKFARDLIKILQDAGQTVSPALTALVRS 559
>gi|255079594|ref|XP_002503377.1| predicted protein [Micromonas sp. RCC299]
gi|226518643|gb|ACO64635.1| predicted protein [Micromonas sp. RCC299]
Length = 489
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 128/249 (51%), Gaps = 48/249 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTG-LTTKIL 133
+I+Y ++FY +A EI+ M+P A R++LDL + P P+ + Q G L+ + L
Sbjct: 7 RIEYGDFNRDFYVEAPEISSMAPDAVEATRRRLDLHVLGVDPPNPVGRFGQCGGLSAETL 66
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ ++ + +P IQ+ A ++ G D V I +TGSGKT AFLLP L H +QP + G
Sbjct: 67 KILKRMGYASPTPIQSQAIPALLQGRDVVGIAKTGSGKTAAFLLPALVHAMDQPELSKG- 125
Query: 194 DSPVGLVMAPTGELVRQQVRR--------------------------------------- 214
D P+ LV+APT EL Q +
Sbjct: 126 DGPIVLVLAPTRELGSQILAECKKLARAHEGLRCVGVLGGGSKTENFRELRAGAEVVVGT 185
Query: 215 -GRMIDLLCKNGVK-ITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR++D +C G K TNL RVTYL LDEADRM DMGFE Q+ + +RPDRQ LFS
Sbjct: 186 PGRVVD-VCGGGNKAATNLARVTYLALDEADRMLDMGFEAQVRSLCDGVRPDRQTALFSA 244
Query: 273 TFPPRVEIL 281
T P RV L
Sbjct: 245 TMPARVRAL 253
>gi|426199199|gb|EKV49124.1| hypothetical protein AGABI2DRAFT_65810 [Agaricus bisporus var.
bisporus H97]
Length = 494
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/243 (36%), Positives = 131/243 (53%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
++ KNFY + ++++ R +R+ ++K++ + P+PI ++ + G ++ +
Sbjct: 19 EKFEKNFYIEDKKVSARSDREIEEFRRTKEIKVQGRNVPRPISSFEEAGFPQYLMTSIRA 78
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+P IQ A + ++G D VAI +TGSGKT++F LP + HI QP + PG D P+
Sbjct: 79 QGFSSPTPIQCQAWPMALTGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAPG-DGPIA 137
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
L++APT EL Q Q+R GR+ID
Sbjct: 138 LILAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIAIATPGRLID 197
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L TNL R+TYLVLDEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 198 MLESGK---TNLKRITYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKDVQ 254
Query: 280 ILA 282
LA
Sbjct: 255 KLA 257
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ LK ++ + + ENA A +
Sbjct: 362 IATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGLKGTSYTYFTTENAKAARE 421
Query: 349 LVKAFELSELVVRDDLKAVA 368
L+ ++ V+ L+ +A
Sbjct: 422 LINILREAKAVIPPQLEEMA 441
>gi|327275873|ref|XP_003222696.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Anolis
carolinensis]
Length = 924
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y KNF+ + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIEYPPFEKNFHEEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGIPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RVTYLV DEADRMFDMGFE Q+ + ++RP+RQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVTYLVFDEADRMFDMGFEYQVRSVASHVRPERQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTHKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQNVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>gi|340382274|ref|XP_003389645.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Amphimedon
queenslandica]
Length = 704
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 156/331 (47%), Gaps = 73/331 (22%)
Query: 18 PLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREII--- 74
PLDAFM +E F H +R R E+ S ++ D+N + I
Sbjct: 97 PLDAFMAGIEYMFLFH----YRAVREDIEEEDDQESYFKAMANAPIVILDDENEQDIDYD 152
Query: 75 ---------KSKI----------KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKI 111
+K+ +IDY+ +KNFY + + +++ RK+L +K
Sbjct: 153 SDGNPIIPESAKVIDPLPPIDHSEIDYKPFQKNFYEEDESVQKLTKKEVQELRKKLGIKA 212
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGK 171
PKP ++ G +++ K P IQA + +SG D + + +TGSGK
Sbjct: 213 SGFSPPKPCVSFAHFGFDPQLMALIRKSEFTTPTPIQAQSIPASLSGRDVIGVAQTGSGK 272
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---QVRR-------------- 214
T+A+L P+L H +QP + G D P+GL+ APT EL +Q Q R+
Sbjct: 273 TVAYLWPLLVHCIDQPEIKEG-DGPIGLICAPTRELCQQIYHQARKFGKAYNLSVVCVYG 331
Query: 215 ----------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252
GR+IDL+ +K TNL RVT+LV DEADRMFD+GFEP
Sbjct: 332 GGSRYEQSLAVKEGCEILVATPGRLIDLV---KLKATNLQRVTFLVFDEADRMFDLGFEP 388
Query: 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
Q+ I ++RPDRQ +LFS TF +VE L R
Sbjct: 389 QVRSIANHVRPDRQTLLFSATFRKKVEKLCR 419
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFR 336
I + K + +A V ARGLD + V+N+D D + +VH ++ K A+
Sbjct: 510 ITSFKKQAFPILVATDVAARGLDIASIRTVVNYDMARDIDTHVHRIGRTGRAGTKGTAYT 569
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+ ++ A DLV+ E ++ VV ++L ++A
Sbjct: 570 LVLPKDVNLAGDLVRNLETADQVVPEELLSLA 601
>gi|156084974|ref|XP_001609970.1| p68-like protein [Babesia bovis]
gi|154797222|gb|EDO06402.1| p68-like protein [Babesia bovis]
Length = 529
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/242 (40%), Positives = 126/242 (52%), Gaps = 48/242 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKI-REKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY + E++ MS A RK+ ++ I + PKP+ ++ T IL+
Sbjct: 67 FEKNFYKEHSEVSAMSSADVDRVRKEREITIIAGRDVPKPVVSFEHTSFPDYILKAIRAA 126
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ + +SG D + I ETGSGKTLAFLLP + HI Q + PG D P+ L
Sbjct: 127 GFTAPTPIQVQGWPIALSGRDVIGIAETGSGKTLAFLLPAVVHINAQHLLRPG-DGPIVL 185
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT ELV RQQ+ GR+ID
Sbjct: 186 VLAPTRELVEQIRQQCVQFGASSRIKSSVAYGGVPKRQQMYELKRGVEILLACPGRLIDF 245
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N +TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 246 LESN---VTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPREVQS 302
Query: 281 LA 282
LA
Sbjct: 303 LA 304
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYA 346
+ +A V +RGLD +++++VINFD PN EDYVH ++ K ++ F++ + A
Sbjct: 407 IMVATDVASRGLDVRDVKVVINFDFPNQIEDYVHRIGRTGRGGNKGASYTFLTPDKNRVA 466
Query: 347 TDLVKAFELSELVVRDDLKAVAD 369
+LVK ++ + +L +A+
Sbjct: 467 RELVKLMREAKQQISPELSKLAN 489
>gi|348511217|ref|XP_003443141.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Oreochromis niloticus]
Length = 628
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY Q ++ R S YR+ + ++ + P PI + + + +++ +K
Sbjct: 58 KFEKNFYQQHPDVARRSHPEVEQYRRSKTITVKGRDCPNPIMKFHEASFPSYVMDVINKQ 117
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N P IQA L +SG+D V I +TGSGKTLA+LLP + HI QP + G D P+ L
Sbjct: 118 NWTEPTPIQAQGWPLALSGMDMVGIAQTGSGKTLAYLLPAIVHINHQPFLERG-DGPICL 176
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 177 VLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 236
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 237 L---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 293
Query: 281 LA 282
LA
Sbjct: 294 LA 295
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VINFD PN+ EDY+H +S A+ F + N A+D
Sbjct: 401 IATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQASD 460
Query: 349 LVKAFELSELVVRDDLKAVAD 369
LV + + L +A+
Sbjct: 461 LVSVLREANQAINPKLLQMAE 481
>gi|389749883|gb|EIM91054.1| DEAD-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 487
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 129/241 (53%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + +T R +R+ ++K++ + P+P+ ++ + G ++ +
Sbjct: 21 FEKNFYIEDKRVTARSDREIEEFRRTKEIKVQGRNVPRPVTSFEEVGFPEYLMTSIKAQG 80
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P +IQ A + +SG D VAI +TGSGKT++F LP + HI QP + PG D P+ LV
Sbjct: 81 FPAPTSIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLSPG-DGPIALV 139
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID+L
Sbjct: 140 LAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 199
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++FS T+P V+ L
Sbjct: 200 ---ETQKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMFSATWPKDVQKL 256
Query: 282 A 282
A
Sbjct: 257 A 257
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ LK +F + + +NA A D
Sbjct: 362 IATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGLKGTSFTYFTTDNAKSARD 421
Query: 349 LV 350
L+
Sbjct: 422 LL 423
>gi|255543421|ref|XP_002512773.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223547784|gb|EEF49276.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 540
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 126/243 (51%), Gaps = 47/243 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + MS YR + D+ + PKPI+ +++ LE +KL
Sbjct: 185 FEKNFYIENPSVQAMSEHEVIMYRARRDITVEGHDVPKPIRIFQEANFPGYCLEVIAKLG 244
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQA + + G D + I ETGSGKTLA++LP L H+ QP +V G + PV L+
Sbjct: 245 FVEPTPIQAQGWPMALKGRDVIGIAETGSGKTLAYVLPALVHVSAQPRLVQG-EGPVVLI 303
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID+L
Sbjct: 304 LAPTRELAVQIQEEALKFGSRANIRTTCIYGGAPKGPQIRDLHRGVEIVIATPGRLIDML 363
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI ++V IRPDRQ + +S T+P VE L
Sbjct: 364 E---AQHTNLRRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLYWSATWPREVETL 420
Query: 282 ARK 284
AR+
Sbjct: 421 ARQ 423
>gi|16197947|gb|AAL13744.1| LD21880p [Drosophila melanogaster]
Length = 680
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 118/201 (58%), Gaps = 45/201 (22%)
Query: 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----- 210
+SG D + I +TGSGKTLAF+LPM RHI +QP + GD + + ++MAPT EL Q
Sbjct: 1 MSGRDLIGIAKTGSGKTLAFILPMFRHILDQPSMEDGDGA-IAIIMAPTRELCMQIGKDI 59
Query: 211 -------------------------QVRRG---------RMIDLLCKNGVKITNLTRVTY 236
+++RG RMID+L N ++TNL RVTY
Sbjct: 60 RKFSKSLGLRPVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 119
Query: 237 LVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSV 296
+VLDEADRMFDMGFEPQ+ RI+ N+RPDRQ V+FS TFP ++E LAR+ + I V
Sbjct: 120 VVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARR--ILKKPIEVIV 177
Query: 297 RARGLDEKELE---LVINFDA 314
R + KE+E +++N DA
Sbjct: 178 GGRSVVCKEVEQHVVILNDDA 198
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I+ K+ L IA SV ARGLD K+L LV+N+D PN YEDYVH C ++ K A+
Sbjct: 256 IIDFKSGKVRLLIATSVAARGLDVKDLILVVNYDVPNHYEDYVHRCGRTGRAGKKGSAYT 315
Query: 337 FISEENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM- 395
FI+ E + YA D+++A +LS ++ +L+A+ + A VH G
Sbjct: 316 FITPEQSRYAGDIIRAMDLSGTLIPAELQALWTEYKALQEAEGKTVHTGGGFSGKGFKFD 375
Query: 396 KRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDE 427
++ K+ +K Q G D D ED+++
Sbjct: 376 EQEFNAAKESKKLQKAALGLA-DSDDEEDIEQ 406
>gi|194897089|ref|XP_001978588.1| GG17597 [Drosophila erecta]
gi|190650237|gb|EDV47515.1| GG17597 [Drosophila erecta]
Length = 955
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 52/266 (19%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFY-----TQAREITRMSPAYRKQLDLKIREKCAP 117
++K ++ R ++K K + + + K+FY T A+ +++ R++L++ + P
Sbjct: 180 REKAKNPGRNLVKPKWE-NLEPFHKDFYNIHPNTLAKSEQQVA-DIRRELEITVSGNELP 237
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
P+ ++ ++ L ++E + P AIQ+ + +SG D V I +TGSGKTLA++L
Sbjct: 238 HPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYML 297
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR--------- 214
P + HI QPP++ G + P+ LV+APT EL +Q ++R
Sbjct: 298 PAIVHIGNQPPIIRG-EGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSK 356
Query: 215 ------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
GR+ID L + TNL R TYLVLDEADRM DMGFEPQI +
Sbjct: 357 VPQARDLDRGVEVIIATPGRLIDFLEN---RNTNLQRCTYLVLDEADRMLDMGFEPQIRK 413
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILA 282
I++ IRPDRQ V++S T+P V+ LA
Sbjct: 414 IIEQIRPDRQVVMWSATWPKEVQALA 439
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 546 SNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 603
Query: 343 AIYATDLVKAFELSELVVRDDLKAVADSFIAKV---------NLGLGQVHGTGHGGV 390
A A +L+ E + L +A S + N G G + GH GV
Sbjct: 604 AKQARELISVLEEAGQTPSQALLDLARSMPSSGGYRGNKRWNNNGGGDRNTGGHNGV 660
>gi|195048170|ref|XP_001992482.1| GH24775 [Drosophila grimshawi]
gi|193893323|gb|EDV92189.1| GH24775 [Drosophila grimshawi]
Length = 977
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 138/265 (52%), Gaps = 50/265 (18%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFY-TQAREITRMSPA---YRKQLDLKIREKCAPK 118
++K ++ R ++K + + Q K+FY + R A R +L++ + P
Sbjct: 178 REKAKNPGRNLVKPHWE-NLQPFLKDFYIMHPNTLNRSEQAVAEMRHELEITVSGNDLPH 236
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + ++ L T +++ + P AIQ+ + +SG D V I +TGSGKTLA++LP
Sbjct: 237 PVANFEESSLPTHVIDEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLP 296
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------- 210
+ HI QPP++ G + P+ LV+APT EL +Q
Sbjct: 297 AIVHIGNQPPIMRG-EGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKV 355
Query: 211 -QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
QVR GR+ID L + TNL R TYLVLDEADRM DMGFEPQI +I
Sbjct: 356 PQVRDLERGVEVIIATPGRLIDFLEN---RNTNLQRCTYLVLDEADRMLDMGFEPQIRKI 412
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILA 282
++ IRPDRQ V++S T+P V+ LA
Sbjct: 413 IEQIRPDRQVVMWSATWPKEVQALA 437
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 544 SNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 601
Query: 343 AIYATDLVKAFELSELVVRDDLKAVA 368
A A +L+ E +E +L +A
Sbjct: 602 AKQARELISVLEEAEQTPSQELLDLA 627
>gi|449481826|ref|XP_002195734.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Taeniopygia
guttata]
Length = 655
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 141/286 (49%), Gaps = 67/286 (23%)
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIR--E 113
+R +KKK D N + + KNFY + E+ R++P R++ ++ IR E
Sbjct: 34 ERLRKKKWDLN----------ELPKFEKNFYVEHPEVARLTPYEVEELRRKKEITIRGME 83
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
C PKP+ + Q +++ N P IQ L +SG D V I +TGSGKTL
Sbjct: 84 GC-PKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTL 142
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
A+LLP + HI QP + GD P+ LV+APT EL +Q
Sbjct: 143 AYLLPAIVHINHQPYLERGD-GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGA 201
Query: 211 ----QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
Q+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI
Sbjct: 202 PKGPQIRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQI 258
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
+IV IRPDRQ +++S T+P V LA + NV NL ++
Sbjct: 259 RKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELS 304
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 392 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 451
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 452 LIKVLEEANQAINPKLMQLVD 472
>gi|326911972|ref|XP_003202329.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Meleagris gallopavo]
Length = 645
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 141/286 (49%), Gaps = 67/286 (23%)
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIR--E 113
+R +KKK D N + + KNFY + E+ R++P R++ ++ IR E
Sbjct: 24 ERLRKKKWDLN----------ELPKFEKNFYVEHPEVARLTPYEVEELRRKKEITIRGME 73
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
C PKP+ + Q +++ N P IQ L +SG D V I +TGSGKTL
Sbjct: 74 GC-PKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTL 132
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
A+LLP + HI QP + GD P+ LV+APT EL +Q
Sbjct: 133 AYLLPAIVHINHQPYLERGD-GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGA 191
Query: 211 ----QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
Q+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI
Sbjct: 192 PKGPQIRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQI 248
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
+IV IRPDRQ +++S T+P V LA + NV NL ++
Sbjct: 249 RKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELS 294
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 382 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 441
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 442 LIKVLEEANQAINPKLMQLVD 462
>gi|325183171|emb|CCA17628.1| putative RNA helicase [Albugo laibachii Nc14]
Length = 1157
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + E+ R + ++++ D+ K P+ + T+ + +LE +L
Sbjct: 713 FEKNFYYEHPEVARRTEKELERWKQEHDITTHGKNIPRCVYTFEEASFPAYVLEEVMRLG 772
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQ + +SG D V I+ TGSGKTLAFLLP + HI QP + PG D P+ L+
Sbjct: 773 FQKPTPIQCQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPHLEPG-DGPIVLI 831
Query: 201 MAPTGEL---VRQQVRR------------------------------------GRMIDLL 221
+APT EL ++Q+ + GRMIDLL
Sbjct: 832 IAPTRELAVQIQQEANKFGASSKIKNTCVYGGVPKYNQIMELRQGVEICICTPGRMIDLL 891
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQ+ +IV IRPDRQ +++S T+P + L
Sbjct: 892 SQGK---TNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEIVSL 948
Query: 282 AR 283
A
Sbjct: 949 AH 950
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V +RGLD K++ VINFD P + EDY+H ++ K A F + +N A+
Sbjct: 1053 VATDVASRGLDIKDIRYVINFDMPKNVEDYIHRIGRTARAGSKGTAISFFTSDNGRLASP 1112
Query: 349 LVKAFE 354
L++ E
Sbjct: 1113 LIRVLE 1118
>gi|170099095|ref|XP_001880766.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644291|gb|EDR08541.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 498
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 130/243 (53%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + + + +S +R+ ++K++ + P+P+ ++ Q G ++ +
Sbjct: 19 EHFEKNFYIEDKRVAALSDREIEEFRRIKEIKVQGRNVPRPVVSFDQVGFPEYLMSSIRA 78
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ A + ++G D VAI +TGSGKT++F LP + HI QP + PG D P+
Sbjct: 79 QGFDAPTPIQCQAWPMALTGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAPG-DGPIA 137
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL Q Q+R GR+ID
Sbjct: 138 LVLAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLID 197
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L + TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 198 ML---ETQKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQ 254
Query: 280 ILA 282
LA
Sbjct: 255 KLA 257
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ +K ++ + + +NA A +
Sbjct: 362 IATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGISYTYFTTDNAKSARE 421
Query: 349 LV 350
L+
Sbjct: 422 LI 423
>gi|118082784|ref|XP_416260.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Gallus
gallus]
Length = 655
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 141/286 (49%), Gaps = 67/286 (23%)
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIR--E 113
+R +KKK D N + + KNFY + E+ R++P R++ ++ IR E
Sbjct: 34 ERLRKKKWDLN----------ELPKFEKNFYVEHPEVARLTPYEVEELRRKKEITIRGME 83
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
C PKP+ + Q +++ N P IQ L +SG D V I +TGSGKTL
Sbjct: 84 GC-PKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTL 142
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
A+LLP + HI QP + GD P+ LV+APT EL +Q
Sbjct: 143 AYLLPAIVHINHQPYLERGD-GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGA 201
Query: 211 ----QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
Q+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI
Sbjct: 202 PKGPQIRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQI 258
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
+IV IRPDRQ +++S T+P V LA + NV NL ++
Sbjct: 259 RKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELS 304
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 392 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 451
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 452 LIKVLEEANQAINPKLMQLVD 472
>gi|18857967|ref|NP_572424.1| CG10777 [Drosophila melanogaster]
gi|7290853|gb|AAF46295.1| CG10777 [Drosophila melanogaster]
gi|16648356|gb|AAL25443.1| LD32873p [Drosophila melanogaster]
gi|220947598|gb|ACL86342.1| CG10777-PB [synthetic construct]
Length = 945
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 52/266 (19%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFY-----TQAREITRMSPAYRKQLDLKIREKCAP 117
++K ++ R ++K K + + + K+FY T A+ +++ R++L++ + P
Sbjct: 176 REKAKNPGRNLVKPKWE-NLEPFLKDFYNIHPNTLAKSEQQVA-EIRRELEITVSGNELP 233
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
P+ ++ ++ L ++E + P AIQ+ + +SG D V I +TGSGKTLA++L
Sbjct: 234 HPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYML 293
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR--------- 214
P + HI QPP++ G + P+ LV+APT EL +Q ++R
Sbjct: 294 PAIVHIGNQPPIIRG-EGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSK 352
Query: 215 ------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
GR+ID L + TNL R TYLVLDEADRM DMGFEPQI +
Sbjct: 353 VPQARDLDRGVEVIIATPGRLIDFLEN---RNTNLQRCTYLVLDEADRMLDMGFEPQIRK 409
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILA 282
I++ IRPDRQ V++S T+P V+ LA
Sbjct: 410 IIEQIRPDRQVVMWSATWPKEVQALA 435
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 542 SNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 599
Query: 343 AIYATDLVKAFE 354
A A +L+ E
Sbjct: 600 AKQARELISVLE 611
>gi|327279490|ref|XP_003224489.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Anolis
carolinensis]
Length = 600
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/263 (36%), Positives = 133/263 (50%), Gaps = 48/263 (18%)
Query: 64 KKKRDKNREIIKSKIKID-YQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPK 118
KK + ++ K K +D + KNFY + ++ R YR ++ ++ PK
Sbjct: 28 KKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVARRPMQEIEQYRGSKEITVKGHNCPK 87
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + ++E + N +P AIQA + +SGLD V + +TGSGKTL++LLP
Sbjct: 88 PVMNFYEANFPANVMEVIQRQNFTDPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLP 147
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------Q 211
+ HI QP + G D P+ LV+APT EL +Q Q
Sbjct: 148 AIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYGRACRLKSTCIYGGAPKGPQ 206
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV
Sbjct: 207 IRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 263
Query: 260 NIRPDRQAVLFSPTFPPRVEILA 282
IRPDRQ +++S T+P V LA
Sbjct: 264 QIRPDRQTLMWSATWPKEVRQLA 286
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N +D
Sbjct: 392 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSD 451
Query: 349 LV 350
L+
Sbjct: 452 LI 453
>gi|348532716|ref|XP_003453852.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Oreochromis niloticus]
Length = 653
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 127/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFYT+ E+ R++ +RK+ ++ IR PKP+ + +++ +
Sbjct: 54 KFEKNFYTEHLEVQRVNQYEVEDFRKRKEITIRGSGCPKPVTAFHHAQFPQYVMDVLMQQ 113
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N + P AIQ+ +SG D V I +TGSGKTLA+LLP + HI QP + G D P+ L
Sbjct: 114 NFKEPTAIQSQGFPAALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG-DGPICL 172
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 173 VLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDF 232
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V
Sbjct: 233 L---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRQ 289
Query: 281 LA 282
LA
Sbjct: 290 LA 291
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D P+ EDYVH +S K A+ F + N A D
Sbjct: 397 IATDVASRGLDVEDVKFVINYDYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARD 456
Query: 349 LVKAFELSELVVRDDLKAVADS 370
LV+ E + + L + DS
Sbjct: 457 LVRVLEEARQAINPKLLQLVDS 478
>gi|148229654|ref|NP_001084230.1| DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Xenopus laevis]
gi|8163810|gb|AAF73861.1|AF218580_1 p68 RNA helicase [Xenopus laevis]
Length = 608
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 129/254 (50%), Gaps = 48/254 (18%)
Query: 73 IIKSKIKID-YQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTG 127
++K K +D + KNFY + ++ R +P YR+ ++ +R PKPI + +
Sbjct: 39 LMKKKWNLDELPKFEKNFYQEHPDVVRRTPQECDQYRRSKEITVRGINCPKPILNFNEAS 98
Query: 128 LTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQP 187
++E + N P IQ + +SGLD V + TGSGKTL++LLP + HI QP
Sbjct: 99 FPANVMEAIKRQNFTEPTPIQGQGWPVALSGLDMVGVAMTGSGKTLSYLLPGIVHINHQP 158
Query: 188 PVVPGDDSPVGLVMAPTGELVRQ---------------------------QVRR------ 214
+ G D P+ LV+APT EL +Q Q+R
Sbjct: 159 FLQRG-DGPILLVLAPTRELAQQVQQVAAEYGRACRLRSTCIYGGAPKGPQIRDLERGVE 217
Query: 215 ------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAV 268
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +
Sbjct: 218 ICIATPGRLIDFL---EAGKTNLNRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTL 274
Query: 269 LFSPTFPPRVEILA 282
++S T+P V LA
Sbjct: 275 MWSATWPKEVRQLA 288
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H ++ S A+ F + N D
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSSKTGTAYTFFTPGNIKQVND 453
Query: 349 LVKAFELSELVVRDDL 364
L+ + + +L
Sbjct: 454 LISVLREANQAINPNL 469
>gi|348677782|gb|EGZ17599.1| hypothetical protein PHYSODRAFT_300617 [Phytophthora sojae]
Length = 841
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/246 (36%), Positives = 132/246 (53%), Gaps = 47/246 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
+ Y+ R+NFY+ E + +S R +L +K+ P P++++ G K+L T
Sbjct: 94 VRYEPFRRNFYSLHSETSSLSNQEVAKLRLELSVKVDGSDVPAPVQSFMHLGFDRKMLHT 153
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
KL E P AIQA A + +SG D + I +TGSGKTLAF LPM+ H+ +Q + G +
Sbjct: 154 LMKLGLEAPTAIQAQAFPVALSGRDLIGIAKTGSGKTLAFTLPMVCHVMDQRELQRG-EG 212
Query: 196 PVGLVMAPTGELVRQ---QVRR------------------------------------GR 216
P+ +V+APT EL Q Q ++ GR
Sbjct: 213 PIAVVLAPTRELAHQTYVQAKKFLAVYGASCAAIYGGAGKWEQVQALKKGVEVVVATPGR 272
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+I+++ K K + RVT++VLDEADRMF+MGFEPQ+ ++ IRPDRQ ++FS TF
Sbjct: 273 LIEMIRK---KTAPMNRVTFVVLDEADRMFEMGFEPQLRSVMGQIRPDRQTLMFSATFRR 329
Query: 277 RVEILA 282
R+E LA
Sbjct: 330 RIEALA 335
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 8/100 (8%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-------CQS 328
R E L++ K C + +A V ARGLD K+++ V+NFD + + +VH +
Sbjct: 425 RAEALSKFKHGECRVLVATDVAARGLDVKDVKNVVNFDVAKNIDTHVHRIGRTGRMGLEG 484
Query: 329 WLKSCAFRFISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+ A+ ++ + +A LV ++S V +L A+A
Sbjct: 485 FEPGTAYTLVTRNESQFAAQLVYNMDVSGQPVSAELLALA 524
>gi|294886917|ref|XP_002771918.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239875718|gb|EER03734.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 521
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 128/248 (51%), Gaps = 48/248 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKI-REKCAPKPIKTWRQTGLTTKILE 134
I + KNFY + +++R++P R++ D+ I + P+PI T+ Q G IL
Sbjct: 70 IQLTKFEKNFYIEHPDVSRLTPEEVDNIRRKHDITIVAGRNVPRPIVTFEQAGFPDYILH 129
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
++ P IQ + +SG D V I ETGSGKTLAFLLP + HI QP + G D
Sbjct: 130 ELAQAGFVAPTPIQIQGWPVAMSGRDMVGIAETGSGKTLAFLLPAIVHINAQPYLQRG-D 188
Query: 195 SPVGLVMAPTGELVRQ---------------------------QVRR------------G 215
P+ LVMAPT EL Q Q R G
Sbjct: 189 GPIVLVMAPTRELAVQIQEECNKFGKSSKIKNTCCYGGVPRGPQARDLSEGVEICIATPG 248
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID L + TNL RVTYLVLDEADRM DMGFEPQI +I IRPDRQ +L+S T+P
Sbjct: 249 RLIDFLES---QRTNLRRVTYLVLDEADRMLDMGFEPQIRKITSQIRPDRQTLLWSATWP 305
Query: 276 PRVEILAR 283
V+ LAR
Sbjct: 306 KEVQGLAR 313
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC---AFRFISE 340
K+ + IA V +RGLD K++ V+N+D P EDYVH ++ C A+ F +
Sbjct: 409 KSGKSPIMIATDVASRGLDVKDIRHVVNYDFPGQIEDYVHRIGRTGRAGCKGNAYTFFTA 468
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+ A LV+ + V +L+ ++
Sbjct: 469 DKIKMARGLVQILREANQTVSPELERLS 496
>gi|195565659|ref|XP_002106416.1| GD16140 [Drosophila simulans]
gi|194203792|gb|EDX17368.1| GD16140 [Drosophila simulans]
Length = 800
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 52/266 (19%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFY-----TQAREITRMSPAYRKQLDLKIREKCAP 117
++K ++ R ++K K + + + K+FY T A+ +++ R++L++ + P
Sbjct: 177 REKAKNPGRNLVKPKWE-NLEPFLKDFYNIHPNTLAKSEQQVADI-RRELEITVSGNELP 234
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
P+ ++ ++ L ++E + P AIQ+ + +SG D V I +TGSGKTLA++L
Sbjct: 235 HPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYML 294
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR--------- 214
P + HI QPP++ G + P+ LV+APT EL +Q ++R
Sbjct: 295 PAIVHIGNQPPIIRG-EGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSK 353
Query: 215 ------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
GR+ID L + TNL R TYLVLDEADRM DMGFEPQI +
Sbjct: 354 VPQARDLDRGVEVIIATPGRLIDFLEN---RNTNLQRCTYLVLDEADRMLDMGFEPQIRK 410
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILA 282
I++ IRPDRQ V++S T+P V+ LA
Sbjct: 411 IIEQIRPDRQVVMWSATWPKEVQALA 436
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 543 SNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 600
Query: 343 AIYATDLVKAFE 354
A A +L+ E
Sbjct: 601 AKQARELISVLE 612
>gi|52430509|gb|AAH82849.1| DDX5 protein [Xenopus laevis]
Length = 608
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 129/254 (50%), Gaps = 48/254 (18%)
Query: 73 IIKSKIKID-YQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTG 127
++K K +D + KNFY + ++ R +P YR+ ++ +R PKPI + +
Sbjct: 39 LMKKKWNLDELPKFEKNFYQEHPDVVRRTPQECDQYRRSKEITVRGINCPKPILNFNEAS 98
Query: 128 LTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQP 187
++E + N P IQ + +SGLD V + TGSGKTL++LLP + HI QP
Sbjct: 99 FPANVMEAIKRQNFTEPTPIQGQGWPVALSGLDMVGVAMTGSGKTLSYLLPGIVHINHQP 158
Query: 188 PVVPGDDSPVGLVMAPTGELVRQ---------------------------QVRR------ 214
+ G D P+ LV+APT EL +Q Q+R
Sbjct: 159 FLQRG-DGPILLVLAPTRELAQQVQQVAAEYGRACRLRSTCIYGGAPKGPQIRDLERGVE 217
Query: 215 ------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAV 268
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +
Sbjct: 218 ICIATPGRLIDFL---EAGKTNLNRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTL 274
Query: 269 LFSPTFPPRVEILA 282
++S T+P V LA
Sbjct: 275 MWSATWPKEVRQLA 288
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H ++ S A+ F + N D
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSSKTGTAYTFFTPGNIKQVND 453
Query: 349 LV 350
L+
Sbjct: 454 LI 455
>gi|195438679|ref|XP_002067260.1| GK16276 [Drosophila willistoni]
gi|194163345|gb|EDW78246.1| GK16276 [Drosophila willistoni]
Length = 950
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 136/265 (51%), Gaps = 50/265 (18%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFYT-QAREITRMSPA---YRKQLDLKIREKCAPK 118
++K ++ R ++K K + + KNFY + + A R +L++ + P
Sbjct: 180 REKAKNPGRNLVKPKWE-NLAPFHKNFYNIHPNTLNKTEQAVAEMRHELEITVSGNDLPH 238
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + L I++ + P AIQA + +SG D V I +TGSGKTLA++LP
Sbjct: 239 PVANFEEASLPPHIIDEMKRQGFTKPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLP 298
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR---------- 214
+ HI QPP++ G + PV LV+APT EL +Q ++R
Sbjct: 299 AIVHIGNQPPILRG-EGPVALVLAPTRELAQQIQSVVRDYGHLCQPEIRHTCIFGGSSKV 357
Query: 215 -----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
GR+ID L + TNL R TYLVLDEADRM DMGFEPQI +I
Sbjct: 358 PQARDLERGVEVIIATPGRLIDFLEN---RNTNLQRCTYLVLDEADRMLDMGFEPQIRKI 414
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILA 282
++ IRPDRQ V++S T+P V+ LA
Sbjct: 415 IEQIRPDRQVVMWSATWPKEVQALA 439
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 547 SNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 604
Query: 343 AIYATDLVKAFE 354
A A +L+ E
Sbjct: 605 AKQARELISVLE 616
>gi|242012227|ref|XP_002426835.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212511048|gb|EEB14097.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 678
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 126/245 (51%), Gaps = 47/245 (19%)
Query: 81 DYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETF 136
+ Q +KNFYT R+I+ S YR + + I K P PI +++ I+
Sbjct: 83 NLQPFKKNFYTPHRDISNRSNNEINQYRNDMAMTIIGKDIPYPITRFQEANFPDYIMNVI 142
Query: 137 SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSP 196
K P IQA + +SG D V I +TGSGKT+A++LP + HI QPP + +D P
Sbjct: 143 RKQGFTVPTPIQAQGWPIALSGKDIVGIAKTGSGKTIAYMLPAIVHIHNQPP-LELNDGP 201
Query: 197 VGLVMAPTGELVRQ------------QVRR---------------------------GRM 217
+ L++APT EL +Q ++R GR+
Sbjct: 202 IALILAPTRELAQQIQSVANDFGEATRIRNSCIFGGAPKGPQFRDLESGVEIVIATPGRL 261
Query: 218 IDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPR 277
ID L K TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P
Sbjct: 262 IDFLEKG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQVLMWSATWPKE 318
Query: 278 VEILA 282
V LA
Sbjct: 319 VRALA 323
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++++ VI FD P+ EDY+H +S A+ F + N +A
Sbjct: 429 VATDVAARGLDVEDVKFVIIFDYPSSLEDYIHRIGRTGRSEQTGTAYAFFTPHNVKHANA 488
Query: 349 LVKAFELSELVVRDDLKAVA 368
L+ E ++ +V L +A
Sbjct: 489 LINVLEEADQIVNPKLVEMA 508
>gi|195394063|ref|XP_002055665.1| GJ19487 [Drosophila virilis]
gi|194150175|gb|EDW65866.1| GJ19487 [Drosophila virilis]
Length = 953
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 138/265 (52%), Gaps = 50/265 (18%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFY-TQAREITRMSPA---YRKQLDLKIREKCAPK 118
++K ++ R ++K + + Q +K+FY + R A R +L++ + P
Sbjct: 176 REKAKNPGRNLVKPHWE-NLQPFQKDFYIMHPNTMNRSEQAVAEMRHELEITVSGNELPH 234
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + ++ L I++ + P AIQA + +SG D V I +TGSGKTLA++LP
Sbjct: 235 PVANFEESSLPPHIIDEMKRQGFTKPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLP 294
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR---------- 214
+ HI QPP++ G + P+ LV+APT EL +Q ++R
Sbjct: 295 AIVHIGNQPPIMRG-EGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKV 353
Query: 215 -----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
GR+ID L + TNL R TYLVLDEADRM DMGFEPQI +I
Sbjct: 354 PQARDLERGVEVIIATPGRLIDFLEN---RNTNLQRCTYLVLDEADRMLDMGFEPQIRKI 410
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILA 282
++ IRPDRQ V++S T+P V+ LA
Sbjct: 411 IEQIRPDRQVVMWSATWPKEVQALA 435
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 543 SNILIATDVASRGLDVEDLQFVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 600
Query: 343 AIYATDLVKAFE 354
A A +L+ E
Sbjct: 601 AKQARELISVLE 612
>gi|340520139|gb|EGR50376.1| predicted protein [Trichoderma reesei QM6a]
Length = 547
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 130/242 (53%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T SPA +R++ + I + PKP++T+ + G +++
Sbjct: 87 KFEKDFYKEHPDVTARSPAEVDEFRRKHQMTIAGRDVPKPVETFDEAGFPRYVMDEVKAQ 146
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 147 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 205
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 206 ILAPTRELAVQIQQEISKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 265
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 266 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRA 322
Query: 281 LA 282
LA
Sbjct: 323 LA 324
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ A +
Sbjct: 422 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGQHGTAITLFTT 481
Query: 341 ENAIYATDLVKAFE 354
+N A DLV +
Sbjct: 482 DNQKQARDLVNVLQ 495
>gi|294893710|ref|XP_002774608.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239880001|gb|EER06424.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 520
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/248 (40%), Positives = 127/248 (51%), Gaps = 48/248 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILE 134
I + KNFY + ++R++P R+Q D+ I + P+P+ T+ Q G IL
Sbjct: 65 IQLTKFEKNFYIEHPNVSRLTPEEVDNIRRQHDITIVAGRNVPRPVVTFEQAGFPDYILH 124
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
++ P IQ + +SG D V I ETGSGKTLAFLLP + HI QP + G D
Sbjct: 125 ELAQAGFVAPTPIQIQGWPVAMSGRDMVGIAETGSGKTLAFLLPAIVHINAQPYLQRG-D 183
Query: 195 SPVGLVMAPTGELVRQ---------------------------QVRR------------G 215
P+ LVMAPT EL Q Q R G
Sbjct: 184 GPIVLVMAPTRELAVQIQEECNKFGKSSKIKNTCCYGGVPRGPQARDLSEGVEICIATPG 243
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID L + TNL RVTYLVLDEADRM DMGFEPQI +I IRPDRQ +L+S T+P
Sbjct: 244 RLIDFLES---QRTNLRRVTYLVLDEADRMLDMGFEPQIRKITSQIRPDRQTLLWSATWP 300
Query: 276 PRVEILAR 283
V+ LAR
Sbjct: 301 KEVQGLAR 308
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC---AFRFISEENAIYA 346
+ IA V +RGLD K++ V+N+D P EDYVH ++ C A+ F + + A
Sbjct: 410 IMIATDVASRGLDVKDIRHVVNYDFPGQIEDYVHRIGRTGRAGCKGNAYTFFTPDKIKMA 469
Query: 347 TDLVKAFELSELVVRDDLKAVA 368
DLV+ + V +L+ ++
Sbjct: 470 RDLVQILREANQTVSPELERLS 491
>gi|50312211|ref|XP_456137.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660243|sp|Q6CIV2.1|DBP2_KLULA RecName: Full=ATP-dependent RNA helicase DBP2
gi|49645273|emb|CAG98845.1| KLLA0F23716p [Kluyveromyces lactis]
Length = 554
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 128/241 (53%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + ++ +MS + +RK+ ++ I PKPI+++ + G + +L+ +
Sbjct: 73 FEKNFYQEHPDVAQMSESEVIEFRKENEMTISGHDVPKPIRSFDEAGFPSYVLDEVKQEG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQ + +SG D + + TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 133 FAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPIVLV 191
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
+APT EL QQ+R GR+ID+L
Sbjct: 192 LAPTRELAVQIQKECSKFGASSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDML 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 252 E---IGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQL 308
Query: 282 A 282
A
Sbjct: 309 A 309
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYA 346
+ +A V ARG+D K + VIN+D P + EDYVH ++ A F +E N
Sbjct: 413 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLG 472
Query: 347 TDLVKAFELSELVVRDDLK 365
L+K ++ + ++L+
Sbjct: 473 AALIKIMREAKQDIPEELR 491
>gi|195480298|ref|XP_002101215.1| GE17497 [Drosophila yakuba]
gi|194188739|gb|EDX02323.1| GE17497 [Drosophila yakuba]
Length = 962
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 52/266 (19%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFY-----TQAREITRMSPAYRKQLDLKIREKCAP 117
++K ++ R ++K K + + + K+FY T A+ +++ R++L++ + P
Sbjct: 178 REKAKNPGRNLVKPKWE-NLEPFHKDFYNIHPNTLAKSEQQVA-DIRRELEITVSGNELP 235
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
P+ ++ ++ L ++E + P AIQ+ + +SG D V I +TGSGKTLA++L
Sbjct: 236 HPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYML 295
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR--------- 214
P + HI QPP++ G + P+ LV+APT EL +Q ++R
Sbjct: 296 PAIVHIGNQPPILRG-EGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSK 354
Query: 215 ------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
GR+ID L + TNL R TYLVLDEADRM DMGFEPQI +
Sbjct: 355 VPQARDLDRGVEVIIATPGRLIDFLEN---RNTNLQRCTYLVLDEADRMLDMGFEPQIRK 411
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILA 282
I++ IRPDRQ V++S T+P V+ LA
Sbjct: 412 IIEQIRPDRQVVMWSATWPKEVQALA 437
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 16/117 (13%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 544 SNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 601
Query: 343 AIYATDLVKAFELSELVVRDDLKAVADSFIAK---------VNLGLGQVHGTGHGGV 390
A A +L+ E + L +A S + N G G + GH GV
Sbjct: 602 AKQARELISVLEEAGQTPSQALLDLARSMPSSGGYRGNKRWNNNGGGDRNTGGHNGV 658
>gi|221483330|gb|EEE21649.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii GT1]
gi|221507816|gb|EEE33403.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 550
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 128/248 (51%), Gaps = 48/248 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKI-REKCAPKPIKTWRQTGLTTKILE 134
ID KNFY + + MS R+ ++ I PKP+ T+ T + IL+
Sbjct: 83 IDLVPFEKNFYVEHPAVANMSAEEAERIRRANEITIVHGHNVPKPVPTFEYTSFPSYILD 142
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
++ + P AIQ + +SG D + I ETGSGKTLAFLLP + HI QP + G D
Sbjct: 143 VINQTGFQKPTAIQVQGWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQPYLNKG-D 201
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ L++APT ELV Q Q R G
Sbjct: 202 GPIVLILAPTRELVEQIRAQCRTFAASSKIHHAVAYGGVPKRPQIMELERGAEICVACPG 261
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID L ++TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +++S T+P
Sbjct: 262 RLIDFLES---RVTNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWP 318
Query: 276 PRVEILAR 283
V+ LAR
Sbjct: 319 KEVQNLAR 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYA 346
+ +A V +RGLD K++ VIN+D PN EDY+H ++ K CA+ F + + A
Sbjct: 428 IMVATDVASRGLDVKDIRHVINYDMPNQIEDYIHRIGRTGRAGAKGCAYTFFTPDKPRLA 487
Query: 347 TDLVKAFELSELVVRDDLKAVA 368
+LV+ + V +L+++
Sbjct: 488 RELVRVLRGANQPVPPELESLG 509
>gi|237839461|ref|XP_002369028.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211966692|gb|EEB01888.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
Length = 550
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/248 (39%), Positives = 128/248 (51%), Gaps = 48/248 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKI-REKCAPKPIKTWRQTGLTTKILE 134
ID KNFY + + MS R+ ++ I PKP+ T+ T + IL+
Sbjct: 83 IDLVPFEKNFYVEHPAVANMSAEEAERIRRANEITIVHGHNVPKPVPTFEYTSFPSYILD 142
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
++ + P AIQ + +SG D + I ETGSGKTLAFLLP + HI QP + G D
Sbjct: 143 VINQTGFQKPTAIQVQGWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQPYLNKG-D 201
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ L++APT ELV Q Q R G
Sbjct: 202 GPIVLILAPTRELVEQIRAQCRTFAASSKIHHAVAYGGVPKRPQIMELERGAEICVACPG 261
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID L ++TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +++S T+P
Sbjct: 262 RLIDFLES---RVTNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWP 318
Query: 276 PRVEILAR 283
V+ LAR
Sbjct: 319 KEVQNLAR 326
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYA 346
+ +A V +RGLD K++ VIN+D PN EDY+H ++ K CA+ F + + A
Sbjct: 428 IMVATDVASRGLDVKDIRHVINYDMPNQIEDYIHRIGRTGRAGAKGCAYTFFTPDKPRLA 487
Query: 347 TDLVKAFELSELVVRDDLKAVA 368
+LV+ + V +L+++
Sbjct: 488 RELVRVLRGANQPVPPELESLG 509
>gi|50409637|ref|XP_456892.1| DEHA2A12958p [Debaryomyces hansenii CBS767]
gi|74659543|sp|Q6BY27.1|DBP2_DEBHA RecName: Full=ATP-dependent RNA helicase DBP2
gi|49652556|emb|CAG84869.1| DEHA2A12958p [Debaryomyces hansenii CBS767]
Length = 536
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 126/243 (51%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++T S A+RK+ D+K PKPI ++ + G +L+ +
Sbjct: 64 KFEKNFYNEHPDVTARSVQDVNAFRKEHDMKCDGTDIPKPITSFDEAGFPDYVLKEVKQQ 123
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P +IQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 124 GFPKPTSIQCQGWPMALSGRDMVGIASTGSGKTLSYCLPSIVHINAQPLLSPG-DGPIVL 182
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR+ID+
Sbjct: 183 VLAPTRELAVQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEICIATPGRLIDM 242
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 243 L---ETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQA 299
Query: 281 LAR 283
L R
Sbjct: 300 LTR 302
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
KT + +A V ARG+D K + VIN D P + EDYVH ++ A F ++
Sbjct: 399 KTGKSPIMVATDVAARGIDVKGISYVINLDMPGNIEDYVHRIGRTGRAGSTGTAVSFFTD 458
Query: 341 ENAIYATDLVK 351
N+ DL K
Sbjct: 459 NNSKLGGDLCK 469
>gi|401410444|ref|XP_003884670.1| hypothetical protein NCLIV_050680 [Neospora caninum Liverpool]
gi|325119088|emb|CBZ54640.1| hypothetical protein NCLIV_050680 [Neospora caninum Liverpool]
Length = 578
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/245 (38%), Positives = 128/245 (52%), Gaps = 42/245 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKI-REKCAPKPIKTWRQTGLTTKILE 134
+D KNFY + + MS R+ ++ I PKP+ T+ T + IL+
Sbjct: 81 VDLVPFEKNFYVEHPAVASMSTEEADRIRRANEITIVHGHNVPKPVPTFEYTSFPSYILD 140
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
++ + P AIQ + +SG D + I ETGSGKTLAFLLP + HI QP + G D
Sbjct: 141 VINQTGFQKPTAIQVQGWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQPYLSKG-D 199
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRRGRMIDLLCKN 224
P+ L++APT ELV Q ++ RG I + C
Sbjct: 200 GPIVLILAPTRELVEQIRTQCRTFAASSKIHHAVAYGGVPKRPQIMELERGAEICVACPG 259
Query: 225 GV------KITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRV 278
+ ++TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 260 RLIDFLESRVTNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEV 319
Query: 279 EILAR 283
+ LAR
Sbjct: 320 QNLAR 324
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYA 346
+ +A V +RGLD K++ VIN+D PN EDY+H ++ K CA+ F + + + A
Sbjct: 456 IMVATDVASRGLDVKDIRHVINYDMPNQIEDYIHRIGRTGRAGAKGCAYTFFTPDKSRLA 515
Query: 347 TDLVKAFELSELVVRDDLKAVA 368
+LV+ + V +L+++
Sbjct: 516 RELVRVLRGANQPVPPELESLG 537
>gi|396490503|ref|XP_003843351.1| hypothetical protein LEMA_P074610.1 [Leptosphaeria maculans JN3]
gi|312219930|emb|CBX99872.1| hypothetical protein LEMA_P074610.1 [Leptosphaeria maculans JN3]
Length = 1226
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S AYRK+ + ++ K PKP+ T+ + G + ++
Sbjct: 776 KFEKSFYKEDPAVTARSDAEVEAYRKEHQMTVQGKNIPKPVTTFDEAGFPSYVMNEVKAQ 835
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V + ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 836 GFAKPTAIQAQGWPMALSGRDVVGVAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 894
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 895 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLARGVEVCIATPGRLIDM 954
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 955 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 1011
Query: 281 LA 282
LA
Sbjct: 1012 LA 1013
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
KT + +A V +RG+D + + V N+D PN+ EDYVH ++ A +
Sbjct: 1098 KTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYVHRIGRTGRAGANGTAITLFTT 1157
Query: 341 ENAIYATDLVK 351
EN+ A DLV+
Sbjct: 1158 ENSKQARDLVQ 1168
>gi|281207583|gb|EFA81766.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 802
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + E+ M+ YR D+ + PKPI T+ Q+ I++
Sbjct: 357 KFEKNFYKEDEELASMTDQEVEQYRTSADMTVFGTNIPKPILTFSQSHFPPYIMKEIVAA 416
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + + + G D + + ETGSGKTLAFLLP + HI QP + P +D P+ L
Sbjct: 417 GFAAPTAIQAQSWPVALKGRDMIGLAETGSGKTLAFLLPGVVHINAQPFLEP-NDGPIML 475
Query: 200 VMAPTGELVRQ------------------------------QVRR---------GRMIDL 220
V+APT EL Q Q+R GR+IDL
Sbjct: 476 VLAPTRELAMQIQAECDKFGSSSKIKNCAVYGGVPKFQQTSQLRSGVEIVIATPGRLIDL 535
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLVLDEADRM DMGFE QI +I+ IRPDRQ ++FS T+P V+
Sbjct: 536 LE---TRKTNLKRVTYLVLDEADRMLDMGFEDQIRKILSQIRPDRQTLMFSATWPKVVQS 592
Query: 281 LA 282
LA
Sbjct: 593 LA 594
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD K+++ VIN+D PN E Y+H ++ AF + + A +
Sbjct: 697 IATDVASRGLDVKDIKYVINYDFPNTIESYIHRIGRTGRAGATGTAFTLFTTNDMRLAGE 756
Query: 349 LV 350
L+
Sbjct: 757 LI 758
>gi|169610529|ref|XP_001798683.1| hypothetical protein SNOG_08367 [Phaeosphaeria nodorum SN15]
gi|160702090|gb|EAT84643.2| hypothetical protein SNOG_08367 [Phaeosphaeria nodorum SN15]
Length = 668
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 127/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T +P AYRK+ + ++ PKP+ T+ + G + ++
Sbjct: 321 KFEKSFYKEDPAVTARTPEEVDAYRKEHQMTVQGTNIPKPVTTFDEAGFPSYVMSEVKAQ 380
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P AIQA + +SG D V + ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 381 GFDKPTAIQAQGWPMALSGRDVVGVAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 439
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 440 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLARGVEVCIATPGRLIDM 499
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R+TYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 500 LEAGK---TNLRRITYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 556
Query: 281 LA 282
LA
Sbjct: 557 LA 558
>gi|224121758|ref|XP_002318665.1| predicted protein [Populus trichocarpa]
gi|222859338|gb|EEE96885.1| predicted protein [Populus trichocarpa]
Length = 541
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 125/243 (51%), Gaps = 47/243 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + I +S YR + ++ + PKPI+ + + L+ +KL
Sbjct: 80 FEKNFYFENPSIRALSEHEVVMYRTRREITVEGHDVPKPIRLFHEANFPDYCLQVIAKLG 139
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQA + + G D + I ETGSGKTLA++LP H+ QP +V G D P+ LV
Sbjct: 140 FVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYMLPAFVHVAAQPRLVQG-DGPIVLV 198
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID+L
Sbjct: 199 LAPTRELAVQIQEEGLKFGSPANIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 258
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ + +S T+P VEIL
Sbjct: 259 ---EAQHTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLYWSATWPREVEIL 315
Query: 282 ARK 284
AR+
Sbjct: 316 ARQ 318
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P+ EDYVH ++ + AF F ++
Sbjct: 412 KSGRSAIMTATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGARGTAFTFFTD 471
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
NA +A L++ + S +V L A+A
Sbjct: 472 SNAKFARGLIRILQESGQIVPPALSALA 499
>gi|45361303|ref|NP_989229.1| DEAD (Asp-Glu-Ala-Asp) box helicase 5 [Xenopus (Silurana)
tropicalis]
gi|38969901|gb|AAH63223.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Xenopus (Silurana)
tropicalis]
gi|89271852|emb|CAJ81861.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Xenopus (Silurana)
tropicalis]
Length = 609
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 130/254 (51%), Gaps = 48/254 (18%)
Query: 73 IIKSKIKID-YQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTG 127
++K K +D + KNFY + ++ R +P YR+ ++ +R PKP+ + +
Sbjct: 39 LMKKKWNLDELPKFEKNFYQEHPDVVRRTPQECDQYRRSKEITVRGLNCPKPVLQFHEAS 98
Query: 128 LTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQP 187
++E + N +P IQ + +SGLD V + TGSGKTL++LLP + HI QP
Sbjct: 99 FPANLMEVVKRQNFTDPTPIQGQGWPVALSGLDMVGVAMTGSGKTLSYLLPGIVHINHQP 158
Query: 188 PVVPGDDSPVGLVMAPTGELVRQ---------------------------QVRR------ 214
+ G D P+ LV+APT EL +Q Q+R
Sbjct: 159 FLQRG-DGPILLVLAPTRELAQQVQQVAAEYGRACRLRSTCIYGGAPKGPQIRDLERGVE 217
Query: 215 ------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAV 268
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +
Sbjct: 218 ICIATPGRLIDFL---EAGKTNLNRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTL 274
Query: 269 LFSPTFPPRVEILA 282
++S T+P V LA
Sbjct: 275 MWSATWPKEVRQLA 288
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H ++ S A+ F + N D
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSSKTGTAYTFFTPGNIKQVND 453
Query: 349 LV 350
L+
Sbjct: 454 LI 455
>gi|330842567|ref|XP_003293247.1| hypothetical protein DICPUDRAFT_41749 [Dictyostelium purpureum]
gi|325076448|gb|EGC30233.1| hypothetical protein DICPUDRAFT_41749 [Dictyostelium purpureum]
Length = 551
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 135/264 (51%), Gaps = 52/264 (19%)
Query: 68 DKNREIIKSKIKID-----YQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPK 118
DK ++II+ ID Y + K FY + EIT ++ RK+LD++I+
Sbjct: 46 DKRKKIIEPLPPIDHSKEKYIEFNKYFYDEHEEITNLTEEKLFELRKELDIRIQGSDLVN 105
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ ++ G +L+ SK N + P IQ A + +SG D +AI +TGSGKT F+ P
Sbjct: 106 PVTSFGHYGFENLLLQAISKQNIDTPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWP 165
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELV---------------------------RQQ 211
+ HI +QP + G D P+ L +APT EL +QQ
Sbjct: 166 SIPHIMDQPYLEKG-DGPIALFLAPTRELAQQIYLETLKYSKYFKLRTTVLYGGVSKQQQ 224
Query: 212 VRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+ GR+ID++ +K T L RVTYLVLDEAD+MFD GF PQ+ IV
Sbjct: 225 CKELKAGCEIVVSTPGRLIDMI---KLKATKLNRVTYLVLDEADKMFDFGFGPQVLSIVN 281
Query: 260 NIRPDRQAVLFSPTFPPRVEILAR 283
++RPDRQ +LFS TF VE AR
Sbjct: 282 HVRPDRQTLLFSATFKQNVEDFAR 305
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K N+ IA V ARGLD ++ VINFD D E + H ++ K A+ I+
Sbjct: 400 KEGKVNILIATDVAARGLDIPLIKNVINFDPSRDIESHTHRIGRTGRAGAKGDAYTLITP 459
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
++ +A DLVK E + V DL +A
Sbjct: 460 KDVNFAADLVKNLEGANQYVSSDLIQIA 487
>gi|449542335|gb|EMD33314.1| hypothetical protein CERSUDRAFT_117934 [Ceriporiopsis subvermispora
B]
Length = 514
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 128/241 (53%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + ++ R +RK ++K++ + P+P+ ++ + G I+ T
Sbjct: 56 FEKNFYVEDKRVSARSDREIEEFRKAKEMKVQGRNIPRPVTSFDEIGFPEYIMSTIRAQG 115
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQ A + ++G D VAI +TGSGKT++F LP + HI QP + PG D P+ L+
Sbjct: 116 FPAPTPIQCQAWPMALTGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAPG-DGPIALI 174
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID+L
Sbjct: 175 LAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLIDML 234
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R+TYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+ L
Sbjct: 235 ---ETQKTNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQKL 291
Query: 282 A 282
A
Sbjct: 292 A 292
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ +K ++ + + +NA A +
Sbjct: 397 IATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTSYTYFTTDNAKQARE 456
Query: 349 LV 350
L+
Sbjct: 457 LL 458
>gi|195355988|ref|XP_002044465.1| GM11962 [Drosophila sechellia]
gi|194131630|gb|EDW53672.1| GM11962 [Drosophila sechellia]
Length = 946
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 52/266 (19%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFY-----TQAREITRMSPAYRKQLDLKIREKCAP 117
++K ++ R ++K K + + + K+FY T A+ +++ R++L++ + P
Sbjct: 177 REKAKNPGRNLVKPKWE-NLEPFLKDFYNIHPNTLAKSEQQVA-DIRRELEITVSGNELP 234
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
P+ ++ ++ L ++E + P AIQ+ + +SG D V I +TGSGKTLA++L
Sbjct: 235 HPVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYML 294
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR--------- 214
P + HI QPP++ G + P+ LV+APT EL +Q ++R
Sbjct: 295 PAIVHIGNQPPIIRG-EGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSK 353
Query: 215 ------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
GR+ID L + TNL R TYLVLDEADRM DMGFEPQI +
Sbjct: 354 VPQARDLDRGVEVIIATPGRLIDFLEN---RNTNLQRCTYLVLDEADRMLDMGFEPQIRK 410
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILA 282
I++ IRPDRQ V++S T+P V+ LA
Sbjct: 411 IIEQIRPDRQVVMWSATWPKEVQALA 436
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 543 SNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 600
Query: 343 AIYATDLVKAFE 354
A A +L+ E
Sbjct: 601 AKQARELISVLE 612
>gi|50293017|ref|XP_448941.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661092|sp|Q6FLF3.1|DBP2_CANGA RecName: Full=ATP-dependent RNA helicase DBP2
gi|49528254|emb|CAG61911.1| unnamed protein product [Candida glabrata]
Length = 544
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 141/292 (48%), Gaps = 50/292 (17%)
Query: 38 FRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQL---RKNFYTQAR 94
FR GR D + + + + D RE+IK + + L KNFY +
Sbjct: 20 FRGGRSSDRNDYNRDRNQGYSHGGLRGRHDDGPRELIKPDWESELPNLPPFEKNFYVEHE 79
Query: 95 EITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAP 150
+ S +RK+ ++ I PKPI T+ + G +L+ + P +IQ
Sbjct: 80 VVRNRSDQEVAQFRKESEMTITGHDIPKPITTFDEAGFPDYVLKEVKAEGFDKPTSIQCQ 139
Query: 151 ASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELV-- 208
+ +SG D V I TGSGKTL++ LP + HI QP + PG D P+ LV+APT EL
Sbjct: 140 GWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPIVLVLAPTRELAVQ 198
Query: 209 -------------------------RQQVRR------------GRMIDLLCKNGVKITNL 231
QQ+R GR+ID+L TNL
Sbjct: 199 IQKECSKFGKSSRIRNTCVYGGVPRGQQIRELIRGAEIVIATPGRLIDMLEAGK---TNL 255
Query: 232 TRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ LAR
Sbjct: 256 KRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQLAR 307
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V ARG+D K + V+N+D P + EDYVH ++ A F +E
Sbjct: 404 RTGNSPIMVATDVAARGIDVKGINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTE 463
Query: 341 ENAIYATDLV 350
+N L+
Sbjct: 464 DNKSLGASLI 473
>gi|403417986|emb|CCM04686.1| predicted protein [Fibroporia radiculosa]
Length = 755
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 129/243 (53%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
++ KNFY + + + +S +R+ ++K++ + P+P+ ++ + G I+ T
Sbjct: 285 ERFEKNFYIEDKRVAALSDREVEEFRRTKEMKVQGRSVPRPVSSFDELGFPEYIMSTIRA 344
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P IQ A + +SG D VAI +TGSGKT++F LP + HI QP + G D P+
Sbjct: 345 QGFPAPTPIQCQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLASG-DGPIA 403
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
L++APT EL Q Q+R GR+ID
Sbjct: 404 LILAPTRELAVQIQQECTKFGSNSKIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLID 463
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
+L + TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 464 ML---ETQKTNLRRVTYLVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKDVQ 520
Query: 280 ILA 282
LA
Sbjct: 521 KLA 523
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ +K ++ + + +NA A +
Sbjct: 628 IATDVASRGLDVKDVGYVINYDFPNNCEDYIHRIGRTGRAGMKGTSYTYFTTDNAKSARE 687
Query: 349 LVKAFELSELVVRDDLKAVA 368
L+ ++ +V L+ +A
Sbjct: 688 LISILREAKAIVPPQLEEMA 707
>gi|163915660|gb|AAI57684.1| LOC100135374 protein [Xenopus (Silurana) tropicalis]
Length = 898
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 127/249 (51%), Gaps = 47/249 (18%)
Query: 78 IKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKIL 133
+I+Y KNFY + EIT +P R +L+L++ P+ ++ G +++
Sbjct: 159 TEIEYTPFEKNFYEEHEEITSQTPQQITELRHKLNLRVSGAAPPRLCSSFAHFGFDEQLM 218
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K + P IQ + +SG D + I +TGSGKT AF+ P+L HI +Q + PG
Sbjct: 219 HQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPG- 277
Query: 194 DSPVGLVMAPTGELVRQ---QVRR------------------------------------ 214
D P+ +++ PT EL +Q + +R
Sbjct: 278 DGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 337
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+ID + K K TNL RVTYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 338 GRLIDHVKK---KATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPDRQTLLFSATF 394
Query: 275 PPRVEILAR 283
++E LAR
Sbjct: 395 RKKIEKLAR 403
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A ++ +++ +A D
Sbjct: 506 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAHTLLTPKDSNFAGD 565
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +S+ K G+ GG L +R
Sbjct: 566 LVRNLEGANQYVSKELLDLAMQNSWFRKSRFKAGKGKKLNIGGGGLGYRER 616
>gi|432848351|ref|XP_004066302.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Oryzias
latipes]
Length = 648
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + E+ +S +R++ ++ IR PKP+ + Q +++ +
Sbjct: 55 KFEKNFYIEHPEVQHVSQFEVEEFRRKKEITIRGSGCPKPVTAFHQAHFPQYVMDVLMQQ 114
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N + P AIQ+ + +SG D V I +TGSGKTLA+LLP + HI QP + G D P+ L
Sbjct: 115 NFKEPTAIQSQGFPVALSGKDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERG-DGPICL 173
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 174 VLAPTRELAQQVQQVAYDYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDF 233
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 234 L---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 290
Query: 281 LA 282
LA
Sbjct: 291 LA 292
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RG+D ++++ VIN+D P+ EDYVH +S K A+ F + N A D
Sbjct: 398 IATDVASRGVDVEDVKFVINYDYPSSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARD 457
Query: 349 LVKAFELSELVVRDDLKAVADS 370
LV+ E + + L + DS
Sbjct: 458 LVRVLEEARQAINPKLLQLVDS 479
>gi|301612200|ref|XP_002935570.1| PREDICTED: ATP-dependent RNA helicase DDX42 [Xenopus (Silurana)
tropicalis]
Length = 943
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 127/249 (51%), Gaps = 47/249 (18%)
Query: 78 IKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKIL 133
+I+Y KNFY + EIT +P R +L+L++ P+ ++ G +++
Sbjct: 204 TEIEYTPFEKNFYEEHEEITSQTPQQITELRHKLNLRVSGAAPPRLCSSFAHFGFDEQLM 263
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K + P IQ + +SG D + I +TGSGKT AF+ P+L HI +Q + PG
Sbjct: 264 HQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPG- 322
Query: 194 DSPVGLVMAPTGELVRQ---QVRR------------------------------------ 214
D P+ +++ PT EL +Q + +R
Sbjct: 323 DGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 382
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+ID + K K TNL RVTYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 383 GRLIDHVKK---KATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPDRQTLLFSATF 439
Query: 275 PPRVEILAR 283
++E LAR
Sbjct: 440 RKKIEKLAR 448
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A ++ +++ +A D
Sbjct: 551 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAHTLLTPKDSNFAGD 610
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +S+ K G+ GG L +R
Sbjct: 611 LVRNLEGANQYVSKELLDLAMQNSWFRKSRFKAGKGKKLNIGGGGLGYRER 661
>gi|449265651|gb|EMC76814.1| putative ATP-dependent RNA helicase DDX17, partial [Columba livia]
Length = 481
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/286 (37%), Positives = 141/286 (49%), Gaps = 67/286 (23%)
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIR--E 113
+R +KKK D N + + KNFY + E+ R++P R++ ++ IR E
Sbjct: 19 ERLRKKKWDLN----------ELPKFEKNFYVEHPEVARLTPYEVEELRRKKEITIRGME 68
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
C PKP+ + Q +++ N P IQ L +SG D V I +TGSGKTL
Sbjct: 69 GC-PKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTL 127
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
A+LLP + HI QP + GD P+ LV+APT EL +Q
Sbjct: 128 AYLLPAIVHINHQPYLERGD-GPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGA 186
Query: 211 ----QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
Q+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI
Sbjct: 187 PKGPQIRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQI 243
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
+IV IRPDRQ +++S T+P V LA + NV NL ++
Sbjct: 244 RKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELS 289
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 377 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 436
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 437 LIKVLEEANQAINPKLMQLVD 457
>gi|62857657|ref|NP_001016781.1| DEAD (Asp-Glu-Ala-Asp) box helicase 17 [Xenopus (Silurana)
tropicalis]
Length = 609
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 130/260 (50%), Gaps = 54/260 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFYT+ E+ RM+ R++ ++ IR PKPI + Q +L+
Sbjct: 41 KFEKNFYTEHPEVARMTQHDVEELRRKKEITIRGVNCPKPIYGFHQANFPQYVLDVLIDQ 100
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+ L
Sbjct: 101 RFKEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAMVHINHQPYLERGD-GPICL 159
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 160 VLAPTRELAQQVQQVADDYGKSSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 219
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 220 L---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 276
Query: 281 LAR-------KTNVCNLSIA 293
LA + N+ NL ++
Sbjct: 277 LAEDFLRDYVQINIGNLELS 296
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F +
Sbjct: 376 RTGKAPILIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTP 435
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVAD 369
N A +LVK E + + L + D
Sbjct: 436 GNLKQARELVKVLEEANQTINPKLMQLVD 464
>gi|60501849|gb|AAX22124.1| DEAD-box RNA-dependent helicase p68 [Carassius auratus]
Length = 611
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q+ KNFY + E++R S YR+ ++ ++ + PKPI + + +++ K
Sbjct: 54 QKFEKNFYQEHPEVSRRSIQDVEHYRRTKEITVKGRDCPKPIVKFHEANFPNYVMDVIGK 113
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
N +P IQA + +SG D V I +TGSGKTL++LLP + HI QP + G+ P+
Sbjct: 114 QNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGE-GPIC 172
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 173 LVLAPTRELAQQVQQVAAEYGKASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 232
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L V TNL R TYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 233 FL---EVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKILDQIRPDRQTLMWSATWPKEVR 289
Query: 280 ILA 282
LA
Sbjct: 290 QLA 292
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN+ EDY+H +S A+ F + N A D
Sbjct: 398 IATDVASRGLDVEDIKFVINYDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHD 457
Query: 349 LVKAFELSELVVRDDLKAVAD 369
LV + + L +A+
Sbjct: 458 LVSVLREANQAINPKLIQMAE 478
>gi|183979315|dbj|BAG30754.1| DEAD box polypeptide 5 [Papilio xuthus]
Length = 539
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 126/243 (51%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q KNFY E+ + S YR + ++ + P PI+ + + +++ S
Sbjct: 65 QPFNKNFYNPPPEVLKRSSYEVEEYRNKHEITVSGLDIPNPIQHFEEGNFPDYVMQNISN 124
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ ++ P IQA + +SG + V I +TGSGKTLA++LP + HI QPP+ G D P+
Sbjct: 125 MGYKEPTPIQAQGWPIAMSGHNLVGIAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIA 183
Query: 199 LVMAPTGELV---------------------------RQQVRR------------GRMID 219
LV+APT EL R+Q R GR+ID
Sbjct: 184 LVLAPTRELAQQIQQVACDFGNASYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 243
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+
Sbjct: 244 FLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVK 300
Query: 280 ILA 282
LA
Sbjct: 301 KLA 303
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K ++ +A V ARGLD ++ VINFD PN EDY+H +S K ++ F +
Sbjct: 403 KQGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 462
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVAD 369
N+ A DLV + + + L+ +AD
Sbjct: 463 SNSRQAKDLVNVLQEANQTISPQLQTMAD 491
>gi|148228442|ref|NP_001082679.1| DEAD (Asp-Glu-Ala-Asp) box helicase 17 [Xenopus laevis]
gi|51704021|gb|AAH80992.1| LOC398649 protein [Xenopus laevis]
Length = 610
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 139/284 (48%), Gaps = 64/284 (22%)
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKC 115
+R +KK+ D N + + KNFYT+ E+ RM+ R++ ++ IR
Sbjct: 27 ERLRKKRWDLN----------ELPKFEKNFYTEHPEVARMTQHDVEELRRKKEITIRGVN 76
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP+ + Q +L+ + P IQ L +SG D V I +TGSGKTLA+
Sbjct: 77 CPKPLYAFHQANFPQYVLDVLLDQRFKEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAY 136
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLP + HI QP + GD P+ LV+APT EL +Q
Sbjct: 137 LLPAMVHINHQPYLERGD-GPICLVLAPTRELAQQVQQVADDYGKTSRLKSTCIYGGAPK 195
Query: 211 --QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
Q+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI +
Sbjct: 196 GPQIRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRK 252
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
IV IRPDRQ +++S T+P V LA + N+ NL ++
Sbjct: 253 IVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYSQINIGNLELS 296
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F +
Sbjct: 376 RTGKAPILIATDVASRGLDVEDIKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTP 435
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVAD 369
N A +LVK E + + L + D
Sbjct: 436 GNLKQARELVKVLEEANQTINPKLMQLVD 464
>gi|238493219|ref|XP_002377846.1| RNA helicase (Dbp), putative [Aspergillus flavus NRRL3357]
gi|317157028|ref|XP_001826178.2| ATP-dependent RNA helicase dbp2 [Aspergillus oryzae RIB40]
gi|220696340|gb|EED52682.1| RNA helicase (Dbp), putative [Aspergillus flavus NRRL3357]
gi|391864909|gb|EIT74201.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 556
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S +RK+ ++ ++ K P+P++T+ + G +L
Sbjct: 91 KFEKSFYKEHPDVANRSQRDVDEFRKKFEMSVQGKNIPRPVETFDEAGFPQYVLSEVKAQ 150
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ+ + +SG D V I ETGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 151 GFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPG-DGPIVL 209
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 210 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 269
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 270 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQ 326
Query: 281 LA 282
LA
Sbjct: 327 LA 328
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A F +
Sbjct: 426 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTT 485
Query: 341 ENAIYATDLV 350
+N+ A DLV
Sbjct: 486 DNSKQARDLV 495
>gi|225555683|gb|EEH03974.1| ATP-dependent RNA helicase DBP2 [Ajellomyces capsulatus G186AR]
Length = 544
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 127/243 (52%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +++ S A+RK+ ++ ++ K P+P++T+ + G ++
Sbjct: 85 KFEKSFYKEHPNVSQRSTQEVDAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQ 144
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 145 GFARPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 203
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 204 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDM 263
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++S T+P V
Sbjct: 264 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQ 320
Query: 281 LAR 283
LA+
Sbjct: 321 LAQ 323
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A +
Sbjct: 421 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTT 480
Query: 341 ENAIYATDLV 350
+NA A DLV
Sbjct: 481 DNAKQARDLV 490
>gi|310789728|gb|EFQ25261.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 551
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 136/264 (51%), Gaps = 54/264 (20%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + E+ SPA +R++ + + PKP++T+ + G +++
Sbjct: 87 KFEKSFYKEHEEVANRSPAEVESFRRKHQMAVSGNDVPKPVETFDEAGFPRYVMDEVKAQ 146
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 147 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 205
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 206 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 265
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 266 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRA 322
Query: 281 LAR-------KTNVCNLSIANSVR 297
LA + N+ +L +A + R
Sbjct: 323 LASDFLTDFIQVNIGSLELAANHR 346
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC---AFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ A F +
Sbjct: 422 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAVTFFTT 481
Query: 341 ENAIYATDLVKAF 353
+N+ A DLV
Sbjct: 482 DNSKQARDLVNVL 494
>gi|91206538|sp|Q2U070.1|DBP2_ASPOR RecName: Full=ATP-dependent RNA helicase dbp2
gi|83774922|dbj|BAE65045.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 554
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S +RK+ ++ ++ K P+P++T+ + G +L
Sbjct: 89 KFEKSFYKEHPDVANRSQRDVDEFRKKFEMSVQGKNIPRPVETFDEAGFPQYVLSEVKAQ 148
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ+ + +SG D V I ETGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 149 GFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPG-DGPIVL 207
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 208 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 267
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 268 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQ 324
Query: 281 LA 282
LA
Sbjct: 325 LA 326
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A F +
Sbjct: 424 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTT 483
Query: 341 ENAIYATDLV 350
+N+ A DLV
Sbjct: 484 DNSKQARDLV 493
>gi|261188002|ref|XP_002620418.1| ATP-dependent RNA helicase DBP2 [Ajellomyces dermatitidis SLH14081]
gi|239593429|gb|EEQ76010.1| ATP-dependent RNA helicase DBP2 [Ajellomyces dermatitidis SLH14081]
Length = 548
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 127/243 (52%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T+ S A+RK+ ++ ++ K P+P++T+ + G ++
Sbjct: 89 KFEKSFYKEHPSVTQRSSQEVDAFRKEQEMTVQGKNVPRPVETFDEAGFPQYVMSEVKAQ 148
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 149 GFAKPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 207
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 208 VLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDM 267
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++S T+P V
Sbjct: 268 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQ 324
Query: 281 LAR 283
LA+
Sbjct: 325 LAQ 327
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A +
Sbjct: 425 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTT 484
Query: 341 ENAIYATDLV 350
+NA A DLV
Sbjct: 485 DNAKQARDLV 494
>gi|239615016|gb|EEQ92003.1| ATP-dependent RNA helicase DBP2 [Ajellomyces dermatitidis ER-3]
gi|327357154|gb|EGE86011.1| ATP-dependent RNA helicase DBP2 [Ajellomyces dermatitidis ATCC
18188]
Length = 548
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 127/243 (52%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T+ S A+RK+ ++ ++ K P+P++T+ + G ++
Sbjct: 89 KFEKSFYKEHPSVTQRSSQEVDAFRKEQEMTVQGKNVPRPVETFDEAGFPQYVMSEVKAQ 148
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 149 GFAKPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 207
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 208 VLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDM 267
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++S T+P V
Sbjct: 268 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQ 324
Query: 281 LAR 283
LA+
Sbjct: 325 LAQ 327
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A +
Sbjct: 425 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTT 484
Query: 341 ENAIYATDLV 350
+NA A DLV
Sbjct: 485 DNAKQARDLV 494
>gi|449440640|ref|XP_004138092.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
sativus]
gi|449522189|ref|XP_004168110.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
sativus]
Length = 622
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 127/240 (52%), Gaps = 41/240 (17%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFYT+ + M+ + YR++ D+++ P+PI+++++ L+ +KL
Sbjct: 161 FEKNFYTECPSVRAMTESEVKIYRERRDIRVEGYDVPRPIRSFQEANFPAYCLDVIAKLG 220
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQA + + G D V I ETGSGKTLA+LLP + HI QP + G + P+ LV
Sbjct: 221 FVEPTPIQAQGWPMALKGRDLVGIAETGSGKTLAYLLPAVIHISAQPRLSRG-EGPIVLV 279
Query: 201 MAPTGELVRQQVRRGRMIDL------LC--------------KNGVKI------------ 228
+APT EL Q + L C KNGV+I
Sbjct: 280 LAPTRELAVQIQQEATKFGLHANIRSTCVYGGAPKGPQIRDLKNGVEIVIATPGRLIDML 339
Query: 229 ----TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
TNL RVTYLVLDEADRM DMGFEPQI IV IRPDRQ + +S T+P VE LAR+
Sbjct: 340 EAGHTNLRRVTYLVLDEADRMLDMGFEPQIRTIVSQIRPDRQTLYWSATWPREVEKLARQ 399
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATDL 349
A V ARGLD K+++ VINFD P+ EDYVH ++ K AF F + ENA +A DL
Sbjct: 502 ATDVAARGLDVKDIKCVINFDFPSSLEDYVHRIGRTGRAGAKGTAFTFFTHENAKHARDL 561
Query: 350 VKAFELSELVVRDDLKAVA 368
+K + +V L A+A
Sbjct: 562 IKILREAGQIVTPALSALA 580
>gi|392564654|gb|EIW57832.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 494
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 128/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY + + ++ S +R+ ++K++ + P+P+ ++ + G I+ T
Sbjct: 20 HFEKNFYVEDKRVSSRSDREIEEFRRLKEMKVQGRDIPRPVTSFEEIGFPDYIMSTIRAQ 79
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+P IQ A + ++G D VAI +TGSGKT++F LP + HI QP + PG D P+ L
Sbjct: 80 GFPSPTPIQCQAWPMALTGRDVVAIAQTGSGKTISFALPAMLHINAQPLLAPG-DGPIAL 138
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 139 ILAPTRELAVQIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEIVIATPGRLIDM 198
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R+TYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS T+P V+
Sbjct: 199 LESGK---TNLRRITYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFSATWPKDVQK 255
Query: 281 LA 282
LA
Sbjct: 256 LA 257
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATD 348
IA V +RGLD K++ VIN+D PN+ EDY+H ++ +F + + +NA A +
Sbjct: 362 IATDVASRGLDVKDVRYVINYDFPNNCEDYIHRIGRTGRAGTTGTSFTYFTTDNAKQARE 421
Query: 349 LVKAFELSELVVRDDLKAVA 368
L+ + ++ VV L+ ++
Sbjct: 422 LIGILKEAKAVVPPQLEEMS 441
>gi|325091997|gb|EGC45307.1| ATP-dependent RNA helicase DBP2 [Ajellomyces capsulatus H88]
Length = 544
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 127/243 (52%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +++ S A+RK+ ++ ++ K P+P++T+ + G ++
Sbjct: 85 KFEKSFYKEHPNVSQRSTQEVDAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQ 144
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 145 GFARPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 203
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 204 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDM 263
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++S T+P V
Sbjct: 264 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQ 320
Query: 281 LAR 283
LA+
Sbjct: 321 LAQ 323
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A +
Sbjct: 421 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTT 480
Query: 341 ENAIYATDLV 350
+NA A DLV
Sbjct: 481 DNAKQARDLV 490
>gi|154271069|ref|XP_001536388.1| hypothetical protein HCAG_08709 [Ajellomyces capsulatus NAm1]
gi|160380608|sp|A6RGE3.1|DBP2_AJECN RecName: Full=ATP-dependent RNA helicase DBP2
gi|150409611|gb|EDN05055.1| hypothetical protein HCAG_08709 [Ajellomyces capsulatus NAm1]
Length = 542
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 127/243 (52%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +++ S A+RK+ ++ ++ K P+P++T+ + G ++
Sbjct: 84 KFEKSFYKEHPNVSQRSTHEVDAFRKEHEITVQGKNVPRPVETFDEAGFPQYVMSEVKAQ 143
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 144 GFARPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 202
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 203 VLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDM 262
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++S T+P V
Sbjct: 263 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQ 319
Query: 281 LAR 283
LA+
Sbjct: 320 LAQ 322
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A +
Sbjct: 420 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTT 479
Query: 341 ENAIYATDLV 350
+NA A DLV
Sbjct: 480 DNAKQARDLV 489
>gi|322711331|gb|EFZ02905.1| ATP-dependent RNA helicase dbp-2 [Metarhizium anisopliae ARSEF 23]
Length = 545
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + E+ S A +R++ + I + PKP++T+ + G +L+
Sbjct: 95 KFEKSFYKEIPEVANRSSAEVDAFRRKHQMTIAGRDVPKPVETFDEAGFPRYVLDEVKAQ 154
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 155 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 213
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 214 VLAPTRELAVQIQQEITKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 273
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 274 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMYSATWPKEVRA 330
Query: 281 LA 282
+A
Sbjct: 331 MA 332
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 430 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 489
Query: 341 ENAIYATDLVKAFE 354
+N A +LV +
Sbjct: 490 DNQKQARELVNVLQ 503
>gi|32450205|gb|AAH54236.1| LOC398649 protein, partial [Xenopus laevis]
Length = 415
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 103/284 (36%), Positives = 139/284 (48%), Gaps = 64/284 (22%)
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKC 115
+R +KK+ D N + + KNFYT+ E+ RM+ R++ ++ IR
Sbjct: 27 ERLRKKRWDLN----------ELPKFEKNFYTEHPEVARMTQHDVEELRRKKEITIRGVN 76
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP+ + Q +L+ + P IQ L +SG D V I +TGSGKTLA+
Sbjct: 77 CPKPLYAFHQANFPQYVLDVLLDQRFKEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAY 136
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLP + HI QP + GD P+ LV+APT EL +Q
Sbjct: 137 LLPAMVHINHQPYLERGD-GPICLVLAPTRELAQQVQQVADDYGKTSRLKSTCIYGGAPK 195
Query: 211 --QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
Q+R GR+ID L TNL R TYLVLDEADRM DMGFEPQI +
Sbjct: 196 GPQIRDLERGVEICIATPGRLIDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRK 252
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
IV IRPDRQ +++S T+P V LA + N+ NL ++
Sbjct: 253 IVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYSQINIGNLELS 296
>gi|67539522|ref|XP_663535.1| hypothetical protein AN5931.2 [Aspergillus nidulans FGSC A4]
gi|74657087|sp|Q5B0J9.1|DBP2_EMENI RecName: Full=ATP-dependent RNA helicase dbp2
gi|40738604|gb|EAA57794.1| hypothetical protein AN5931.2 [Aspergillus nidulans FGSC A4]
gi|259479898|tpe|CBF70542.1| TPA: ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B0J9] [Aspergillus
nidulans FGSC A4]
Length = 563
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 127/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T R +RK+ ++ ++ + P+P++T+ + G +L
Sbjct: 99 KFEKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETFDEAGFPQYVLSEVKAQ 158
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ+ + +SG D V I ETGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 159 GFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPG-DGPIVL 217
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 218 ILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 277
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 278 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQ 334
Query: 281 LA 282
LA
Sbjct: 335 LA 336
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ VIN+D PN+ EDYVH ++ K A F +
Sbjct: 434 KTGKSPIMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTT 493
Query: 341 ENAIYATDLV 350
+NA A DLV
Sbjct: 494 DNAKQARDLV 503
>gi|429859673|gb|ELA34444.1| RNA helicase [Colletotrichum gloeosporioides Nara gc5]
Length = 522
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 127/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + E+ SPA +R++ + I PKP++T+ + G +++
Sbjct: 61 KFEKSFYKEHEEVATRSPAEVDSFRRKHQMTIAGNDVPKPVETFDEAGFPRYVMDEVKAQ 120
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 121 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 179
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 180 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 239
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 240 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRA 296
Query: 281 LA 282
LA
Sbjct: 297 LA 298
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A +
Sbjct: 396 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITLFTT 455
Query: 341 ENAIYATDLVKAF 353
+N+ A DLV
Sbjct: 456 DNSKQARDLVNVL 468
>gi|322700629|gb|EFY92383.1| ATP-dependent RNA helicase dbp-2 [Metarhizium acridum CQMa 102]
Length = 552
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + E+ S A +R++ + I + PKP++T+ + G +L+
Sbjct: 95 KFEKSFYKECPEVANRSSAEVDAFRRKHQMTIAGRDVPKPVETFDEAGFPRYVLDEVKAQ 154
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 155 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 213
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 214 VLAPTRELAVQIQQEITKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 273
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 274 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMYSATWPKEVRA 330
Query: 281 LA 282
+A
Sbjct: 331 MA 332
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 430 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 489
Query: 341 ENAIYATDLVKAFE 354
+N A +LV +
Sbjct: 490 DNQKQARELVNVLQ 503
>gi|406608126|emb|CCH40560.1| Pre-mRNA-processing ATP-dependent RNA helicase prp11
[Wickerhamomyces ciferrii]
Length = 912
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 160/325 (49%), Gaps = 58/325 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRL------GRRLPAEDSHS-ASDYELF-------MK 60
E DPLDAFM +E E ++ + G L ED++ YE +
Sbjct: 221 EDDPLDAFMRKIE-GVEEDDDDKPKTKQGENGGPTLDDEDNNDEVGQYEFNDDDEAGELL 279
Query: 61 RAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREIT-RMSPAYRKQLDLKIREKCAPKP 119
R K K+ KN I K +K + ++ KNF Q I +R ++ I K P
Sbjct: 280 RKLKTKKSKNLHIPKYNLK-EMEKFPKNFLVQLESIDPDEVINFRVMNNIFINNKSI-SP 337
Query: 120 IKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
+ + GL + L + +L+ +NP AIQ+ I+SG D + I TGSGKT+ FLL
Sbjct: 338 VMNFYHFGLDAQTLNVINNELSFDNPTAIQSQTIPAIMSGKDVIGIGRTGSGKTMCFLLS 397
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------- 210
ML+HI +Q P+ G+ P+GL+++PT EL Q
Sbjct: 398 MLKHIKQQRPLANGETGPLGLILSPTRELALQIFDACQVFLKNTNLKAICCTGGSELNKQ 457
Query: 211 --QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
++++ GR IDLL N K+ R+T++ LDEADR+FD+GFEPQI + ++
Sbjct: 458 INEIKKGIEIVVATPGRFIDLLTLNNGKLLKTDRITFVTLDEADRLFDLGFEPQINQTMK 517
Query: 260 NIRPDRQAVLFSPTFPPRVEILARK 284
IRPD+Q VLFS TFP +++ A K
Sbjct: 518 TIRPDKQCVLFSATFPSKLQQFAVK 542
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 13/181 (7%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAI 344
N+ I V +RGLD ++ LVI ++A + YVH + K A +S+
Sbjct: 638 SNILICTEVLSRGLDVPDVNLVILYNAARTFAQYVHTTGRTARGNTKGTAISLLSKGEDT 697
Query: 345 YATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQ 404
A L K E+ D+K +A SF ++ G ++ +G GG L+ + ++R +
Sbjct: 698 QAYILYKCMVEDEIPT--DIKDLAISFEKELKEGKKKI-SSGFGGKGLDHLD-KLR--DE 751
Query: 405 LRKAQAKEYGFGEDKSD-SEDVDEGTRKSGGDISHQDSIAKIAT---IAAASNSKASAST 460
K++ K+YG E K + E+ + +G D +++D ++ + NSK S
Sbjct: 752 TEKSERKKYGEDETKKNVKENGSDDNEFNGNDNTNEDDEIDSSSDLNLDIIYNSKIDGSA 811
Query: 461 P 461
P
Sbjct: 812 P 812
>gi|323448800|gb|EGB04694.1| hypothetical protein AURANDRAFT_70381 [Aureococcus anophagefferens]
Length = 544
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 132/251 (52%), Gaps = 50/251 (19%)
Query: 78 IKIDYQQL---RKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
I+ D QL KNFY + ++T S A+R +KI + PKP+ T+ + +
Sbjct: 99 IQWDLSQLPVFEKNFYIEHPDVTARSEGDADAWRTSKQIKIEGRGVPKPVSTFEEASMPD 158
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
+L K + P IQA + + G D + I+ TGSGKTLAFLLP + HI QP +
Sbjct: 159 YVLTEVMKQGFKEPSPIQAQGWPMALLGRDMIGISRTGSGKTLAFLLPGMIHINAQPYLQ 218
Query: 191 PGDDSPVGLVMAPTGELVRQ------------QVRR------------------------ 214
PG D P+ LV+APT EL Q Q++
Sbjct: 219 PG-DGPIVLVLAPTRELAVQIKVECDKFGASSQIKNTCVYGGAPKRTQTGDLQRGVEIVI 277
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID L ++GV TNL RVTYLVLDEADRM DMGFEPQ+ +IV IRPDRQ +++S
Sbjct: 278 ATPGRLIDFL-ESGV--TNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWS 334
Query: 272 PTFPPRVEILA 282
T+P V +A
Sbjct: 335 ATWPKEVRNMA 345
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 308 LVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATDLVK 351
+V+NFD P++ EDYVH C ++ K A F +++++ +A+ L K
Sbjct: 468 MVVNFDFPSNLEDYVHRIGRCGRAGQKGTALSFFTQKSSKWASGLCK 514
>gi|331217131|ref|XP_003321244.1| hypothetical protein PGTG_02286 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300234|gb|EFP76825.1| hypothetical protein PGTG_02286 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 547
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + IT S +R + ++++ K PKPI + + G I+
Sbjct: 72 KFEKNFYVEDPRITSRSERDINQFRAEKEIQVFGKNIPKPISNFSEAGFPDYIMSEIRNA 131
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ A + +SG D VA++ TGSGKT+AF +P + HI QP + PG D P+ L
Sbjct: 132 GFNAPSPIQCQAWPMALSGRDVVAVSATGSGKTIAFSIPAMIHINAQPLLAPG-DGPIVL 190
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
++APT EL QQ+R GR+ID+
Sbjct: 191 ILAPTRELAVQIQGECTKFGASSRIRNTCVYGGVPKGQQIRDLTRGAEIVIATPGRLIDM 250
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLV+DEADRM DMGFEPQI +IV+ IRPDRQ ++FS T+P V+
Sbjct: 251 LES---RKTNLHRVTYLVMDEADRMLDMGFEPQIKKIVEQIRPDRQTLMFSATWPKEVQR 307
Query: 281 LA 282
LA
Sbjct: 308 LA 309
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + IA V +RGLD K++ VIN+D PN EDY+H ++ A+ +IS
Sbjct: 406 KSGRSPIMIATDVASRGLDVKDIAYVINYDMPNGIEDYIHRIGRTGRAGRTGTAYSYISA 465
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+ + A +LVK ++ +V L +A
Sbjct: 466 DQSKLAKELVKILRDAKQIVPSALVEMA 493
>gi|255950466|ref|XP_002566000.1| Pc22g21030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593017|emb|CAP99391.1| Pc22g21030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 552
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 127/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +++ S A+RK+ ++ ++ P+P+KT+ + G +L
Sbjct: 85 KFEKSFYKEHPDVSERSEEEIQAFRKEKEMAVQGSNVPRPVKTFDEAGFPAYVLSEVKAQ 144
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P AIQ+ + +SG D V I ETGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 145 GFDAPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPG-DGPIVL 203
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 204 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 263
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 264 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKDVRQ 320
Query: 281 LA 282
LA
Sbjct: 321 LA 322
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A F + +N+ A
Sbjct: 426 IMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTARAGAKGTAITFFTTDNSKQA 485
Query: 347 TDLV 350
DL+
Sbjct: 486 RDLI 489
>gi|171687132|ref|XP_001908507.1| hypothetical protein [Podospora anserina S mat+]
gi|170943527|emb|CAP69180.1| unnamed protein product [Podospora anserina S mat+]
Length = 489
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 128/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T SPA +R++ + I K P+P++ + + G +++
Sbjct: 20 KFEKSFYKEHPDVTNRSPAEVEAFRREHSMAITGKDVPRPVQNFDEAGFPRYVMDEVKAQ 79
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 80 GFPAPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 138
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 139 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLQRGVEVCIATPGRLIDM 198
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 199 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKDVRN 255
Query: 281 LA 282
LA
Sbjct: 256 LA 257
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + VIN+D PN+ EDY+H ++ K A + +
Sbjct: 357 KTGKSPIMVATDVASRGIDVRNITHVINYDYPNNSEDYIHRIGRTGRAGAKGTAITYFTT 416
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+NA A DLV ++ V+ L+ +A
Sbjct: 417 DNAKQARDLVGVLREAKQVIDPRLEEMA 444
>gi|294898580|ref|XP_002776285.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239883195|gb|EER08101.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 654
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 130/252 (51%), Gaps = 44/252 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKC-APKPIKTWRQTGLTTKIL 133
K + +K+FY + + M+P R++LD++I P PI + + L I+
Sbjct: 152 KYTLTEFQKHFYVEHPRVAAMTPEEVELVRRRLDIEIIHGVDVPNPITQFEEACLPDYIM 211
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K +P IQ + +SG D V I ETGSGKTLAFLLP + HI QP + G
Sbjct: 212 VEIQKAGFVSPTPIQVQGWPVALSGRDMVGIAETGSGKTLAFLLPAVVHINAQPYLQKG- 270
Query: 194 DSPVGLVMAPTGELVRQQV-------RRGRMIDLLCKNGV-------------------- 226
D P+ LV+APT EL Q R R+ + C GV
Sbjct: 271 DGPIVLVLAPTRELALQIKEECDRFGRSSRISNTCCYGGVPRGPQARMLQNGVEICIATP 330
Query: 227 ---------KITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPR 277
++TNL RVTYLVLDEADRM DMGFEPQ+ +IV IRPDRQ +++S T+P
Sbjct: 331 GRLIDFLESEVTNLRRVTYLVLDEADRMLDMGFEPQVRKIVSQIRPDRQTLMWSATWPKD 390
Query: 278 VEILARKTNVCN 289
V+ LAR ++CN
Sbjct: 391 VQQLAR--DLCN 400
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + IA V +RGLD K+++ VIN+D P EDYVH ++ A+ F +
Sbjct: 497 KSGRMPIMIATDVASRGLDVKDVKYVINYDFPGTVEDYVHRIGRTGRAGAHGTAYSFFTA 556
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+ A A L+ + V + L+ +A
Sbjct: 557 DKAKLAKPLIGILREASQPVPEALERLA 584
>gi|400260696|pdb|4A4D|A Chain A, Crystal Structure Of The N-Terminal Domain Of The Human
Dead-Box Rna Helicase Ddx5 (P68)
Length = 253
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 126/243 (51%), Gaps = 49/243 (20%)
Query: 84 QLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + AR + YR+ ++ +R PKP+ + + +++ ++
Sbjct: 2 KFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQ 61
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N P AIQA + +SGLD V + +TGSGKTL++LLP + HI QP + G D P+ L
Sbjct: 62 NFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERG-DGPICL 120
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 121 VLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 180
Query: 221 L-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L C TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 181 LECGK----TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 236
Query: 280 ILA 282
LA
Sbjct: 237 QLA 239
>gi|403160809|ref|XP_003321253.2| hypothetical protein PGTG_02295 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170406|gb|EFP76834.2| hypothetical protein PGTG_02295 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 546
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + IT S +R + ++++ K PKPI + + G I+
Sbjct: 70 KFEKNFYVEDPRITSRSERDINQFRAEKEIQVFGKNIPKPISNFSEAGFPDYIMSEIRNA 129
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ A + +SG D VA++ TGSGKT+AF +P + HI QP + PG D P+ L
Sbjct: 130 GFNAPSPIQCQAWPMALSGRDVVAVSATGSGKTIAFSIPAMIHINAQPLLAPG-DGPIVL 188
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
++APT EL QQ+R GR+ID+
Sbjct: 189 ILAPTRELAVQIQGECTKFGASSRIRNTCVYGGVPKGQQIRDLTRGAEIVIATPGRLIDM 248
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLV+DEADRM DMGFEPQI +IV+ IRPDRQ ++FS T+P V+
Sbjct: 249 LES---RKTNLHRVTYLVMDEADRMLDMGFEPQIKKIVEQIRPDRQTLMFSATWPKEVQR 305
Query: 281 LA 282
LA
Sbjct: 306 LA 307
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + IA V +RGLD K++ VIN+D PN EDY+H ++ A+ +IS
Sbjct: 404 KSGRSPIMIATDVASRGLDVKDIAYVINYDMPNGIEDYIHRIGRTGRAGRTGTAYSYISA 463
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+ + A +LVK ++ +V L +A
Sbjct: 464 DQSKLARELVKILRDAKQIVPSALVEMA 491
>gi|39104531|dbj|BAC98030.2| mKIAA0801 protein [Mus musculus]
Length = 1044
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 147/281 (52%), Gaps = 52/281 (18%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 311 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 370
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 371 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 430
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 431 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 489
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N K +RV Y +
Sbjct: 490 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGK----SRVFYYLFSLL- 544
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+ DM F RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 545 FVLDMIFVEADLRIVDNVRPDRQTVMFSATFPRAMEALARR 585
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 678 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 737
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 738 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 768
>gi|367015284|ref|XP_003682141.1| hypothetical protein TDEL_0F01190 [Torulaspora delbrueckii]
gi|359749803|emb|CCE92930.1| hypothetical protein TDEL_0F01190 [Torulaspora delbrueckii]
Length = 549
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 132/258 (51%), Gaps = 50/258 (19%)
Query: 71 REIIKSKIKIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTW 123
+E+IK + + Q L KNFY + + S A +RK+ ++ I PKPI ++
Sbjct: 52 QELIKPNWEEELQNLPTFEKNFYVEHESVGNRSEAEIAQFRKENEMTISGHDIPKPITSF 111
Query: 124 RQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHI 183
+ G +L+ + P IQ + +SG D + + TGSGKTL++ LP + HI
Sbjct: 112 DEAGFPDYVLKEVKAEGFDKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPSIVHI 171
Query: 184 WEQPPVVPGDDSPVGLVMAPTGELV---------------------------RQQVRR-- 214
QP + PG D P+ LV+APT EL QQ+R
Sbjct: 172 NAQPLLAPG-DGPIVLVLAPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPRGQQIRDLA 230
Query: 215 ----------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPD 264
GR+ID+L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPD
Sbjct: 231 RGAEIVIATPGRLIDML---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 287
Query: 265 RQAVLFSPTFPPRVEILA 282
RQ +++S T+P V+ LA
Sbjct: 288 RQTLMWSATWPKEVKQLA 305
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V ARG+D K + VIN+D P + EDYVH ++ A F +E
Sbjct: 403 RTGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTE 462
Query: 341 ENAIYATDLV 350
N + L+
Sbjct: 463 ANKGLGSSLI 472
>gi|223590235|sp|A5DL80.3|DBP2_PICGU RecName: Full=ATP-dependent RNA helicase DBP2
Length = 554
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 126/243 (51%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY++ +++ S + +RK+ D+K PKPI ++ + G +L +
Sbjct: 84 KFEKNFYSEHPDVSARSESEVQSFRKEHDMKCVGTDIPKPITSFDEAGFPDYVLNEVKQQ 143
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ + +SG D + I TGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 144 GFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLGPG-DGPIVL 202
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR+ID+
Sbjct: 203 VLAPTRELAVQIQQECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDM 262
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 263 L---ETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQT 319
Query: 281 LAR 283
L R
Sbjct: 320 LTR 322
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V ARG+D K + VIN+D P + EDYVH ++ A +E
Sbjct: 419 KTGKSPIMVATDVAARGIDVKGISYVINYDMPGNIEDYVHRIGRTGRAGTTGTAVSLFTE 478
Query: 341 ENAIYATDLVK 351
N+ DL K
Sbjct: 479 ANSKLGGDLCK 489
>gi|452988994|gb|EME88749.1| hypothetical protein MYCFIDRAFT_58038 [Pseudocercospora fijiensis
CIRAD86]
Length = 481
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 126/243 (51%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ SPA +R+ + ++ K PKP++T+ + G ++ +
Sbjct: 20 KFEKSFYKEHPDVAARSPAAVEQFRRDNQITVQGKDVPKPVETFDEAGFPNYVMNEVKQQ 79
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + G D P+ L
Sbjct: 80 GFAKPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYTLPAIVHINAQPLLAQG-DGPIVL 138
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 139 ILAPTRELAVQIQEEVSKFGKSSRIRNTCVYGGVPKGGQIRDLARGVEVCIATPGRLIDM 198
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V+
Sbjct: 199 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVKA 255
Query: 281 LAR 283
LAR
Sbjct: 256 LAR 258
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D K++ V N+D PN+ EDYVH ++ A +
Sbjct: 355 KTGNSPIMVATDVASRGIDVKDITHVFNYDYPNNSEDYVHRIGRTARAGRTGTAITLFTT 414
Query: 341 ENAIYATDLVKAFE 354
ENA A DLV +
Sbjct: 415 ENAKQARDLVNILQ 428
>gi|451847658|gb|EMD60965.1| hypothetical protein COCSADRAFT_174289 [Cochliobolus sativus
ND90Pr]
Length = 1084
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S A YRK+ + ++ PKP+ T+ + G + ++
Sbjct: 634 KFEKSFYKEDPAVTARSEAEVAEYRKEHQMTVKGTNIPKPVTTFDEAGFPSYVMNEVKAQ 693
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V + ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 694 GFAKPTAIQAQGWPMALSGRDVVGVAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 752
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 753 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLARGVEVCIATPGRLIDM 812
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 813 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 869
Query: 281 LA 282
LA
Sbjct: 870 LA 871
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V N+D PN+ EDYVH ++ A +
Sbjct: 956 KTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYVHRIGRTGRAGANGTAITLFTT 1015
Query: 341 ENAIYATDLVK 351
EN+ A DLV+
Sbjct: 1016 ENSKQARDLVQ 1026
>gi|158293651|ref|XP_315003.3| AGAP004912-PB [Anopheles gambiae str. PEST]
gi|157016550|gb|EAA10492.4| AGAP004912-PB [Anopheles gambiae str. PEST]
Length = 705
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 147/286 (51%), Gaps = 58/286 (20%)
Query: 60 KRAKKKKRDKN--REIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIRE 113
KR + +R+ R I ++K+ + +KNF+ A + S A Y + ++ +
Sbjct: 39 KRFDRMERNGENLRSIRWDQVKL--EAFQKNFFQPASSVLTRSRAEVNQYLDKNEITVYG 96
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K P PI + ++G +L+ F + + P IQA ++ +SG D V I +TGSGKTL
Sbjct: 97 KDVPAPIMHFHESGFPQYMLDEFQRQAFKEPTFIQAVGWSIAMSGRDMVGIAKTGSGKTL 156
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
A++LP L HI QP + G D P+ LV+APT EL +Q
Sbjct: 157 AYILPALVHISNQPRIARG-DGPIALVLAPTRELAQQIKQVCDDFGRRMGIYNTCVFGGA 215
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
+RR GR+ID L + + TNL R TYLVLDEADRM DMGFEPQI
Sbjct: 216 SKYPQESDLRRGVEIVIATPGRLIDFLER---ETTNLRRCTYLVLDEADRMLDMGFEPQI 272
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
+I+ IRPDRQ +++S T+P + LA + N+ +L++A
Sbjct: 273 RKIISQIRPDRQVLMWSATWPKEIRKLAEEFLRDYIQINIGSLNLA 318
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 278 VEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCA 334
+ R TN + +A V +RGLD +++ VINFD PN+ EDYVH +S K +
Sbjct: 394 LNTFRRSTN--GILVATDVASRGLDVDDVKFVINFDFPNNTEDYVHRIGRTGRSTNKGTS 451
Query: 335 FRFISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+ F + N+ A DL+ + + + +L A
Sbjct: 452 YTFFTPANSSKAPDLITVLQDANQYINPELHEYA 485
>gi|348521007|ref|XP_003448018.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Oreochromis niloticus]
Length = 633
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 127/243 (52%), Gaps = 49/243 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ +KNFY + ++TR YR+ ++ ++ + PKPI + + + +++ K
Sbjct: 57 KFQKNFYQEHPDVTRRPLQEVEQYRRSKEVTVKGRDCPKPIVKFHEAAFPSYVMDVIVKQ 116
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N P IQ+ + +SG D V I +TGSGKTLA+LLP + HI QP + G D P+ L
Sbjct: 117 NWTEPTPIQSQGWPVALSGKDMVGIAQTGSGKTLAYLLPAIVHIQHQPFLEHG-DGPICL 175
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 176 VLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 235
Query: 221 L-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L C TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 236 LECGK----TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 291
Query: 280 ILA 282
LA
Sbjct: 292 QLA 294
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDY+H +S A+ F + N A+D
Sbjct: 400 IATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQASD 459
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+ + + L +A+
Sbjct: 460 LISVLREANQAINPKLIQMAE 480
>gi|294909743|ref|XP_002777840.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239885802|gb|EER09635.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 625
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/247 (38%), Positives = 131/247 (53%), Gaps = 44/247 (17%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKC-APKPIKTWRQTGLTTKILETFSK 138
+ +K+FY + + M+P R++LD++I P PI + + L I+ K
Sbjct: 135 EFQKHFYVEHPRVAAMTPEEVELVRRKLDIEIIHGVDVPNPITHFEEACLPDYIMVEIQK 194
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
NP IQ + + G D V I ETGSGKTLAFLLP + HI QP + G D P+
Sbjct: 195 AGFVNPTPIQVQGWPVALCGRDMVGIAETGSGKTLAFLLPAVVHINAQPYLQKG-DGPIV 253
Query: 199 LVMAPTGEL---VRQQVRR----GRMIDLLCKNGV------------------------- 226
LV+APT EL ++++ R R+ + C GV
Sbjct: 254 LVLAPTRELALQIKEECDRFGSSSRISNTCCYGGVPRGPQARMLQNGVEICIATPGRLID 313
Query: 227 ----KITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILA 282
++TNL RVTYLVLDEADRM DMGFEPQ+ +IV IRPDRQ +++S T+P V+ LA
Sbjct: 314 FLESEVTNLRRVTYLVLDEADRMLDMGFEPQVRKIVSQIRPDRQTLMWSATWPKDVQQLA 373
Query: 283 RKTNVCN 289
R ++CN
Sbjct: 374 R--DLCN 378
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + IA V +RGLD K+++ VIN+D P EDYVH ++ A+ F +
Sbjct: 475 KTGRMPIMIATDVASRGLDVKDVKYVINYDFPGTIEDYVHRIGRTGRAGAHGTAYSFFTA 534
Query: 341 ENAIYATDLV 350
+ A A L+
Sbjct: 535 DKAKLAKPLI 544
>gi|345569652|gb|EGX52517.1| hypothetical protein AOL_s00043g11 [Arthrobotrys oligospora ATCC
24927]
Length = 531
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 123/242 (50%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + + +PA YR Q +++ + PKP++++ + G ++
Sbjct: 87 KFEKSFYKPCDAVQKRTPAEVDAYRTQRQMRVSGRDVPKPVQSFDEAGFPAYVMNEVKAQ 146
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P IQA + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 147 GFKEPTPIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPG-DGPIVL 205
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR+ID+
Sbjct: 206 VLAPTRELAVQIQQEVTKFGKSSRIRNTCVYGGVPRGQQIRELARGVEVCIATPGRLIDM 265
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGF PQI +IV IRPDRQ +++S T+P V
Sbjct: 266 LEAGK---TNLRRVTYLVLDEADRMLDMGFAPQINKIVSQIRPDRQTLMWSATWPKEVRQ 322
Query: 281 LA 282
LA
Sbjct: 323 LA 324
>gi|294894930|ref|XP_002775023.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239880806|gb|EER06839.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 647
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 130/252 (51%), Gaps = 44/252 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKC-APKPIKTWRQTGLTTKIL 133
K + +K+FY + + M+P R++LD++I P PI + + L I+
Sbjct: 152 KYTLTEFQKHFYVEHPRVAAMTPEEVELVRRRLDIEIIHGVDVPNPITQFEEACLPDYIM 211
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K +P IQ + +SG D V I ETGSGKTLAFLLP + HI QP + G
Sbjct: 212 VEIQKAGFVSPTPIQVQGWPVALSGRDMVGIAETGSGKTLAFLLPAVVHINAQPYLQKG- 270
Query: 194 DSPVGLVMAPTGELVRQQV-------RRGRMIDLLCKNGV-------------------- 226
D P+ LV+APT EL Q R R+ + C GV
Sbjct: 271 DGPIVLVLAPTRELALQIKEECDRFGRSSRISNTCCYGGVPRGPQARMLQNGVEICIATP 330
Query: 227 ---------KITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPR 277
++TNL RVTYLVLDEADRM DMGFEPQ+ +IV IRPDRQ +++S T+P
Sbjct: 331 GRLIDFLESEVTNLRRVTYLVLDEADRMLDMGFEPQVRKIVSQIRPDRQTLMWSATWPKD 390
Query: 278 VEILARKTNVCN 289
V+ LAR ++CN
Sbjct: 391 VQQLAR--DLCN 400
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + IA V +RGLD K+++ VIN+D P EDYVH ++ A+ F +
Sbjct: 497 KSGRMPIMIATDVASRGLDVKDVKYVINYDFPGTIEDYVHRIGRTGRAGAHGTAYSFFTA 556
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+ A A L+ + V + L+ +A
Sbjct: 557 DKAKLAKPLIGILREASQPVPEALERLA 584
>gi|223649022|gb|ACN11269.1| Probable ATP-dependent RNA helicase DDX5 [Salmo salar]
Length = 614
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++TR SP YR + ++ + P PI + + T +++ +K
Sbjct: 53 KFEKNFYQEHPDVTRRSPQEVAQYRSTKAVTVKGRDCPNPIMKFHEASFPTYVMDVINKA 112
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQA L +SG D V I +TGSGKTL++LLP + HI QP + G D P+ L
Sbjct: 113 GWSEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERG-DGPICL 171
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 172 VLAPTRELAQQVQQVAAEYGRASRLKSVCVYGGAPKGPQLRDLDRGVEICIATPGRLIDF 231
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TN+ R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 232 L---EAGKTNMRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 288
Query: 281 LA 282
LA
Sbjct: 289 LA 290
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VINFD PN+ EDY+H +S A+ F + N A+D
Sbjct: 396 IATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQASD 455
Query: 349 LVKAFELSELVVRDDLKAVAD 369
LV + + L +AD
Sbjct: 456 LVAVLREANQAINPKLLQMAD 476
>gi|158293649|ref|XP_001688603.1| AGAP004912-PA [Anopheles gambiae str. PEST]
gi|157016549|gb|EDO63983.1| AGAP004912-PA [Anopheles gambiae str. PEST]
Length = 679
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 147/286 (51%), Gaps = 58/286 (20%)
Query: 60 KRAKKKKRDKN--REIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIRE 113
KR + +R+ R I ++K+ + +KNF+ A + S A Y + ++ +
Sbjct: 13 KRFDRMERNGENLRSIRWDQVKL--EAFQKNFFQPASSVLTRSRAEVNQYLDKNEITVYG 70
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K P PI + ++G +L+ F + + P IQA ++ +SG D V I +TGSGKTL
Sbjct: 71 KDVPAPIMHFHESGFPQYMLDEFQRQAFKEPTFIQAVGWSIAMSGRDMVGIAKTGSGKTL 130
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
A++LP L HI QP + G D P+ LV+APT EL +Q
Sbjct: 131 AYILPALVHISNQPRIARG-DGPIALVLAPTRELAQQIKQVCDDFGRRMGIYNTCVFGGA 189
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
+RR GR+ID L + + TNL R TYLVLDEADRM DMGFEPQI
Sbjct: 190 SKYPQESDLRRGVEIVIATPGRLIDFLER---ETTNLRRCTYLVLDEADRMLDMGFEPQI 246
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
+I+ IRPDRQ +++S T+P + LA + N+ +L++A
Sbjct: 247 RKIISQIRPDRQVLMWSATWPKEIRKLAEEFLRDYIQINIGSLNLA 292
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 278 VEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCA 334
+ R TN + +A V +RGLD +++ VINFD PN+ EDYVH +S K +
Sbjct: 368 LNTFRRSTN--GILVATDVASRGLDVDDVKFVINFDFPNNTEDYVHRIGRTGRSTNKGTS 425
Query: 335 FRFISEENAIYATDLVKAFELSELVVRDDLKAVA 368
+ F + N+ A DL+ + + + +L A
Sbjct: 426 YTFFTPANSSKAPDLITVLQDANQYINPELHEYA 459
>gi|189205174|ref|XP_001938922.1| ATP-dependent RNA helicase dbp2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187986021|gb|EDU51509.1| ATP-dependent RNA helicase dbp2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 573
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S A YRK+ + ++ + PKP+ T+ + G + ++
Sbjct: 88 KFEKSFYKEDPAVTARSAAEVAEYRKEHQMTVKGENIPKPVTTFDEAGFPSYVMNEVKAQ 147
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V + ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 148 GFAKPTAIQAQGWPMALSGRDVVGVAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 206
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 207 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLARGVEVCIATPGRLIDM 266
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 267 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 323
Query: 281 LA 282
LA
Sbjct: 324 LA 325
>gi|190347623|gb|EDK39933.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 126/243 (51%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY++ +++ S + +RK+ D+K PKPI ++ + G +L +
Sbjct: 84 KFEKNFYSEHPDVSARSESEVQSFRKEHDMKCVGTDIPKPITSFDEAGFPDYVLNEVKQQ 143
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ + +SG D + I TGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 144 GFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLGPG-DGPIVL 202
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR+ID+
Sbjct: 203 VLAPTRELAVQIQQECSKFGASSRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDM 262
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 263 L---ETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQT 319
Query: 281 LAR 283
L R
Sbjct: 320 LTR 322
>gi|45709504|gb|AAH67585.1| Ddx5 protein [Danio rerio]
Length = 496
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++ R S YR+ ++ ++ + PKPI + + +++ +K
Sbjct: 55 KFEKNFYQENPDVARRSAQEVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQ 114
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N +P IQA + +SG D V I +TGSGKTL++LLP + HI QP + GD P+ L
Sbjct: 115 NWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGD-GPICL 173
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 174 VLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 233
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 234 LEAGK---TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 290
Query: 281 LA 282
LA
Sbjct: 291 LA 292
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VINFD PN+ EDY+H +S A+ F + N A D
Sbjct: 398 IATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHD 457
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGL 379
LV + + L +A+ K N
Sbjct: 458 LVSVLREANQAINPKLIQMAEDRGGKSNWSF 488
>gi|380483343|emb|CCF40681.1| ATP-dependent RNA helicase DBP2, partial [Colletotrichum
higginsianum]
Length = 420
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 127/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + E+ SP A+R++ + I PKP++T+ + G +++
Sbjct: 91 KFEKSFYKEHDEVANRSPEDVEAFRRKHQIAIAGSDVPKPVETFDEAGFPRYVMDEVKAQ 150
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 151 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 209
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 210 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 269
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 270 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRA 326
Query: 281 LA 282
LA
Sbjct: 327 LA 328
>gi|307191879|gb|EFN75298.1| Probable ATP-dependent RNA helicase DDX5 [Harpegnathos saltator]
Length = 627
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 131/255 (51%), Gaps = 49/255 (19%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
LRK+FY + + S +R+ ++ ++ + P PI+ + + ++E +
Sbjct: 85 LRKDFYVEHPAVRNRSKEEVSQFRENTEITVKGENVPNPIQYFEEGNFPPYVMEGIRRQG 144
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQA + +SG D VAI +TGSGKTL ++LP + HI QP + G D P+ L+
Sbjct: 145 YSQPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQPRLSNG-DGPIALI 203
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q VR GR+ID L
Sbjct: 204 LAPTRELAQQIQEVANCFGESAAVRNTCIFGGAPKGPQAHDLDRGVEICIATPGRLIDFL 263
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 264 EKG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRAL 320
Query: 282 ARK--TNVCNLSIAN 294
A T+ +L+I +
Sbjct: 321 AEDFLTDYTHLNIGS 335
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD +++ VINFD P+ EDY+H ++ + A+ F + N +A D
Sbjct: 427 VATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGD 486
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L++ + V L +A+
Sbjct: 487 LIEVLREAGQNVNPRLSEMAE 507
>gi|157119649|ref|XP_001653435.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875244|gb|EAT39469.1| AAEL008738-PA [Aedes aegypti]
Length = 911
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 153/313 (48%), Gaps = 59/313 (18%)
Query: 18 PLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAK---KKKRDKNREII 74
P DAF + + PN+ P D ++ S E RAK K + + ++
Sbjct: 126 PFDAFGGPKK--YNTMPNSYGNRNGYGPKPDFNNMSKEE----RAKIQSLKAKFPGQGLV 179
Query: 75 KSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
K K D + K+FY + +P A+R+++ + + P P + + +
Sbjct: 180 KPIWK-DLEPFEKDFYVPHPNVMARTPEEVQAFRERMQITVMGNSVPHPSQDFEEGNFPD 238
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
++ +K+ NP AIQA + +SG D V I +TGSGKTLA++LP + HI Q P+
Sbjct: 239 FVMNEINKMGFPNPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLPGIVHIAHQKPLQ 298
Query: 191 PGDDSPVGLVMAPTGELVRQ-----------------------------QVRR------- 214
G + PV LV+APT EL +Q QVR
Sbjct: 299 RG-EGPVVLVLAPTRELAQQIQTVVRDFGTHSKPLIRYTCIFGGALKGPQVRDLERGVEV 357
Query: 215 -----GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVL 269
GR+ID L + ITNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ ++
Sbjct: 358 VIATPGRLIDFLERG---ITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLM 414
Query: 270 FSPTFPPRVEILA 282
+S T+P V+ LA
Sbjct: 415 WSATWPKEVQALA 427
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEENAIYA 346
+A V ARGLD ++++ VINFD PN EDY+H C S+ A+ F + N A
Sbjct: 533 VATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCSSY--GTAYTFFTPGNGRQA 590
Query: 347 TDLVKAFE 354
+L+ E
Sbjct: 591 RELLSVLE 598
>gi|427779853|gb|JAA55378.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 686
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 123/241 (51%), Gaps = 47/241 (19%)
Query: 85 LRKNFY----TQAREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY T A A+RKQ D+ IR K P PI T+ + L + +
Sbjct: 54 FQKDFYKEHPTTAHRPKHEVDAFRKQHDITIRGKDVPNPILTFEEANLPDFCMSAIRQAQ 113
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQA + +SG D V I +TGSGKTLA++LP + HI QP + G D P+ LV
Sbjct: 114 YNTPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAILHISHQPYLERG-DGPIALV 172
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q+R GR+ID L
Sbjct: 173 VAPTRELAQQIQQVASEFGRASRIRNTCVFGGAPKGPQIRDLERGVEICIATPGRLIDFL 232
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V L
Sbjct: 233 ---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRSL 289
Query: 282 A 282
A
Sbjct: 290 A 290
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 4/139 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD +++ VIN+D PN EDYVH +S A+ F + N+ A +
Sbjct: 396 VATDVAARGLDVDDIKFVINYDYPNCSEDYVHRIGRTARSNKTGTAYTFFTPGNSKQAQE 455
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKA 408
L+ + + VV L + + + G T GG N R G +
Sbjct: 456 LISVLKEANQVVNPKLFEMFEMSRSYGGRGGRNRWRTSGGGGRRNDYDDDNRHGGRRYAT 515
Query: 409 QAKEYGFG-EDKSDSEDVD 426
A Y G D S S + D
Sbjct: 516 GANAYNPGNNDYSTSNNSD 534
>gi|121715524|ref|XP_001275371.1| RNA helicase (Dbp), putative [Aspergillus clavatus NRRL 1]
gi|134034064|sp|A1C6C4.1|DBP2_ASPCL RecName: Full=ATP-dependent RNA helicase dbp2
gi|119403528|gb|EAW13945.1| RNA helicase (Dbp), putative [Aspergillus clavatus NRRL 1]
Length = 549
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T R +R++ + ++ K P+P++T+ + G +L
Sbjct: 84 KFEKSFYKEHPDVTARSQREVDEFRQEHKMTVQGKNVPRPVETFDEAGFPQYVLSEVKSQ 143
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 144 GFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 202
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 203 VLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 262
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 263 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQ 319
Query: 281 LA 282
LA
Sbjct: 320 LA 321
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V +RG+D +++ V+N+D PN+ EDY+H ++ K A F + +N+ A
Sbjct: 425 IMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQA 484
Query: 347 TDLV 350
DLV
Sbjct: 485 RDLV 488
>gi|146414664|ref|XP_001483302.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 450
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 126/243 (51%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY++ +++ S + +RK+ D+K PKPI ++ + G +L +
Sbjct: 84 KFEKNFYSEHPDVSARSESEVQSFRKEHDMKCVGTDIPKPITSFDEAGFPDYVLNEVKQQ 143
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ + +SG D + I TGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 144 GFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPLLGPG-DGPIVL 202
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR+ID+
Sbjct: 203 VLAPTRELAVQIQQECSKFGASLRIRNTCIYGGAPKGQQIRDLARGVEICIATPGRLIDM 262
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 263 L---ETGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQT 319
Query: 281 LAR 283
L R
Sbjct: 320 LTR 322
>gi|427781447|gb|JAA56175.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 681
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 123/241 (51%), Gaps = 47/241 (19%)
Query: 85 LRKNFY----TQAREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY T A A+RKQ D+ IR K P PI T+ + L + +
Sbjct: 49 FQKDFYKEHPTTAHRPKHEVDAFRKQHDITIRGKDVPNPILTFEEANLPDFCMSAIRQAQ 108
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQA + +SG D V I +TGSGKTLA++LP + HI QP + G D P+ LV
Sbjct: 109 YNTPTPIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAILHISHQPYLERG-DGPIALV 167
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q+R GR+ID L
Sbjct: 168 VAPTRELAQQIQQVASEFGRASRIRNTCVFGGAPKGPQIRDLERGVEICIATPGRLIDFL 227
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V L
Sbjct: 228 ---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRSL 284
Query: 282 A 282
A
Sbjct: 285 A 285
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 4/139 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD +++ VIN+D PN EDYVH +S A+ F + N+ A +
Sbjct: 391 VATDVAARGLDVDDIKFVINYDYPNCSEDYVHRIGRTARSNKTGTAYTFFTPGNSKQAQE 450
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKA 408
L+ + + VV L + + + G T GG N R G +
Sbjct: 451 LISVLKEANQVVNPKLFEMFEMSRSYGGRGGRNRWRTSGGGGRRNDYDDDNRHGGRRYAT 510
Query: 409 QAKEYGFG-EDKSDSEDVD 426
A Y G D S S + D
Sbjct: 511 GANAYNPGNNDYSTSNNSD 529
>gi|330923164|ref|XP_003300130.1| hypothetical protein PTT_11286 [Pyrenophora teres f. teres 0-1]
gi|311325925|gb|EFQ91808.1| hypothetical protein PTT_11286 [Pyrenophora teres f. teres 0-1]
Length = 483
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S A YRK+ + ++ + PKP+ T+ + G + ++
Sbjct: 20 KFEKSFYKEDPAVTARSAAEVAEYRKEHQMTVKGENIPKPVTTFDEAGFPSYVMNEVKAQ 79
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V + ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 80 GFAKPTAIQAQGWPMALSGRDVVGVAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 138
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 139 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLARGVEVCIATPGRLIDM 198
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 199 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 255
Query: 281 LA 282
LA
Sbjct: 256 LA 257
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V N+D PN+ EDYVH ++ A +
Sbjct: 355 KTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYVHRIGRTGRAGANGTAITLFTT 414
Query: 341 ENAIYATDLVKAFELSE 357
+N+ A DLV+ S+
Sbjct: 415 DNSKQARDLVQILTESK 431
>gi|242787406|ref|XP_002481000.1| RNA helicase (Dbp), putative [Talaromyces stipitatus ATCC 10500]
gi|218721147|gb|EED20566.1| RNA helicase (Dbp), putative [Talaromyces stipitatus ATCC 10500]
Length = 543
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T S A+RK+ + + + P+P++T+ + G +L
Sbjct: 75 KFEKSFYKEHEDVTNRSQKDVDAFRKEHQMAVTGRNVPRPVETFDEAGFPNYVLSEVKAQ 134
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 135 GFAKPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLSPG-DGPIVL 193
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 194 ILAPTRELAVQIQTEISKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 253
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 254 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQ 310
Query: 281 LA 282
LA
Sbjct: 311 LA 312
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V +RG+D +++ VIN+D PN+ EDYVH ++ K A F + +N+ A
Sbjct: 416 IMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQA 475
Query: 347 TDLV 350
DLV
Sbjct: 476 RDLV 479
>gi|448111328|ref|XP_004201815.1| Piso0_002019 [Millerozyma farinosa CBS 7064]
gi|359464804|emb|CCE88509.1| Piso0_002019 [Millerozyma farinosa CBS 7064]
Length = 561
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/243 (39%), Positives = 125/243 (51%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + +T A+RK+ ++ PKPI T+ + G +L K
Sbjct: 87 RFEKNFYKEDPNVTARPDEEVDAFRKENQMQCTGSDIPKPITTFDEAGFPDYVLTEVKKQ 146
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+P AIQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 147 GFPSPTAIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPIVL 205
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 206 VLAPTRELAVQIQQECSKFGRTSRIRNTCIYGGAPKGPQIRDLARGVEICIATPGRLIDM 265
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 266 LEMNK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQN 322
Query: 281 LAR 283
LAR
Sbjct: 323 LAR 325
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
KT + +A V ARG+D K + VIN D P + EDYVH ++ A +E
Sbjct: 422 KTGKSPIMVATDVAARGIDVKGISYVINLDMPGNIEDYVHRIGRTGRAGTTGTAVSLFTE 481
Query: 341 ENAIYATDLVK 351
N+ DL K
Sbjct: 482 ANSKLGGDLCK 492
>gi|47086809|ref|NP_997777.1| probable ATP-dependent RNA helicase DDX5 [Danio rerio]
gi|37362204|gb|AAQ91230.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Danio rerio]
Length = 518
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++ R S YR+ ++ ++ + PKPI + + +++ +K
Sbjct: 55 KFEKNFYQENPDVARRSAQEVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQ 114
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N +P IQA + +SG D V I +TGSGKTL++LLP + HI QP + GD P+ L
Sbjct: 115 NWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGD-GPICL 173
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 174 VLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPQGPQIRDLERGVEICIATPGRLIDF 233
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 234 LEAGK---TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 290
Query: 281 LA 282
LA
Sbjct: 291 LA 292
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VINFD PN+ EDY+H +S A+ F + N A D
Sbjct: 398 IATDVASRGLDVEDVKFVINFDYPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAHD 457
Query: 349 LVKAFELSELVVRDDLKAVAD 369
LV + + L +A+
Sbjct: 458 LVSVLREAHQAINPKLIQMAE 478
>gi|425771138|gb|EKV09591.1| RNA helicase (Dbp), putative [Penicillium digitatum Pd1]
gi|425776662|gb|EKV14870.1| RNA helicase (Dbp), putative [Penicillium digitatum PHI26]
Length = 561
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T S A+RK ++ I+ P+P++T+ + G +L
Sbjct: 91 KFEKSFYKEHPDVTARSEEDVQAFRKSKEMAIQGTNVPRPVETFDEAGFPAYVLSEVKAQ 150
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P AIQ+ + +SG D V I ETGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 151 GFDAPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPG-DGPIVL 209
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 210 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 269
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 270 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 326
Query: 281 LA 282
LA
Sbjct: 327 LA 328
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A F + EN+ A
Sbjct: 432 IMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTARAGAKGTAITFFTTENSKQA 491
Query: 347 TDLV 350
DLV
Sbjct: 492 RDLV 495
>gi|294901515|ref|XP_002777392.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239885023|gb|EER09208.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 531
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/251 (39%), Positives = 127/251 (50%), Gaps = 44/251 (17%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKI-REKCAPKPIKTWRQTGLTTKIL 133
++ + KNFY + ++ MS RK + + K PKPI T+ Q G IL
Sbjct: 70 QVTLSKFEKNFYVEHPDVASMSQDEVDKVRKDRQITVVHGKGVPKPIVTFEQAGFPDYIL 129
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ E P IQ + +SG D V I ETGSGKTLAFLLP + HI QP + G
Sbjct: 130 HEIKQAGFEKPSPIQVQGWPVAMSGRDMVGIAETGSGKTLAFLLPAIVHINAQPYLQRG- 188
Query: 194 DSPVGLVMAPTGELVRQ------QVRRGRMIDLLC--------------KNGVKI----- 228
D P+ LV+APT EL Q + R I C NGV+I
Sbjct: 189 DGPIVLVLAPTRELAVQTQEECNRFGRSSRIRNTCVYGGTPRGPQARALANGVEICIATP 248
Query: 229 -----------TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPR 277
TNL RVTYLVLDEADRM DMGFEPQI +I +RPDRQ +L+S T+P
Sbjct: 249 GRLIDFLESGRTNLRRVTYLVLDEADRMLDMGFEPQIRKITSQVRPDRQTLLWSATWPKE 308
Query: 278 VEILARKTNVC 288
++ LAR ++C
Sbjct: 309 IQGLAR--DLC 317
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + IA V +RGLD K+L VIN+D P EDYVH ++ K A+ F +
Sbjct: 410 KSGKSPIMIATDVASRGLDVKDLRHVINYDFPGQIEDYVHRIGRTGRAGAKGSAYSFFTP 469
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+ A DL+ +E V +L+ +A
Sbjct: 470 DKYKLAKDLIGVLREAEQAVPPELEKIA 497
>gi|299117107|emb|CBN73878.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 467
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 124/244 (50%), Gaps = 47/244 (19%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q+ KNFY + +T S A+R+ + + I+ PKP+ T+ + + +L K
Sbjct: 19 QKFEKNFYIEHPHVTSRSQEEGDAWRRSVGITIQGDGIPKPVMTFEEASMPEYVLREVLK 78
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P IQ+ + + G D V I+ TGSGKTLAFLLP + HI QP + GD P+
Sbjct: 79 QGFPKPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQGD-GPIV 137
Query: 199 LVMAPTGELV---------------------------RQQVRR------------GRMID 219
LV+APT EL R QV GR+ID
Sbjct: 138 LVVAPTRELAVQIKEECDKFGGSSDIKNTCVYGGVPKRSQVYDLSRGVEIVIATPGRLID 197
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
LL TNL RVTYLVLDEADRM DMGFEPQI IV IRPDRQ +++S T+P VE
Sbjct: 198 LLESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRSIVSQIRPDRQTLMWSATWPKEVE 254
Query: 280 ILAR 283
LAR
Sbjct: 255 GLAR 258
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 11/83 (13%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD K++ +VINFD P + E YVH C ++ K A F + +N+ A +
Sbjct: 361 VATDVAARGLDVKDIRMVINFDFPKEMESYVHRIGRCGRAGHKGTAISFFAGKNSKCARE 420
Query: 349 LVKAFELS--------ELVVRDD 363
L++ + + +LVV DD
Sbjct: 421 LIRILKQANQKPRRPRQLVVYDD 443
>gi|295662382|ref|XP_002791745.1| ATP-dependent RNA helicase DBP2 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226279871|gb|EEH35437.1| ATP-dependent RNA helicase DBP2 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 547
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 127/243 (52%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T S ++R+Q ++ ++ K P+P++T+ + G ++
Sbjct: 88 KFEKSFYKEHPDVTARSSQQVDSFRRQHEITVQGKNVPRPVETFDEAGFPQYVMTEVKAQ 147
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 148 GFARPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 206
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 207 VLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDM 266
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++S T+P V
Sbjct: 267 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQ 323
Query: 281 LAR 283
LA+
Sbjct: 324 LAQ 326
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A +
Sbjct: 423 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTT 482
Query: 341 ENAIYATDLVKAFELSE 357
+NA A DLV S+
Sbjct: 483 DNAKQARDLVAILNESK 499
>gi|170064174|ref|XP_001867417.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
gi|167881558|gb|EDS44941.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
Length = 663
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 166/329 (50%), Gaps = 80/329 (24%)
Query: 66 KRDKNREIIKSKIKIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPK 118
++++N E +++ I+ D ++L KNF+ A + S AY + ++ + K P
Sbjct: 17 RQERNGENLRA-IRWDQEKLDAFAKNFFKPASSVLDRSRAEVNAYLDKNEITVIGKNIPA 75
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
PI + + G + IL ++ ++ P IQA ++ SG D V I +TGSGKTLA++LP
Sbjct: 76 PILYFEEGGFPSSILAEITRQGYKEPTQIQAVGWSIATSGRDMVGIAKTGSGKTLAYILP 135
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------- 210
L HI QP ++ G D P+ LV+APT EL +Q
Sbjct: 136 ALIHISNQPRLMRG-DGPIALVLAPTRELAQQIQQVCDDFGRRMSVMNTCIFGGASKMGQ 194
Query: 211 --QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+RR GR+ID L ++G TNL R TYLVLDEADRM DMGFEPQI +I+
Sbjct: 195 ANDLRRGVEIVIATPGRLIDFL-ESGT--TNLRRTTYLVLDEADRMLDMGFEPQIRKIIS 251
Query: 260 NIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIANSVRARGLDEKELELVINF 312
IRPDRQ +++S T+P + LA + N+ +L++A +E L+++
Sbjct: 252 QIRPDRQVLMWSATWPKEIRKLAEEFLRDYIQINIGSLNLA-------ANENILQII--- 301
Query: 313 DAPNDYEDYVHHCCQSWLK-SCAFRFISE 340
CCQ + K S F+ ++E
Sbjct: 302 -----------ECCQEYEKESRLFKLLAE 319
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V +RGLD +++ VINFD PN+ EDY+H +S K A+ F + N+ A D
Sbjct: 380 VATDVASRGLDVDDVKYVINFDFPNNTEDYIHRIGRTGRSTNKGTAYTFFTPANSSKAND 439
Query: 349 LVKAFELSELVVRDDLKAVA 368
L++ + + V +L+ A
Sbjct: 440 LIQVLKTANQYVNPELQEYA 459
>gi|156835836|ref|XP_001642179.1| hypothetical protein Kpol_165p1 [Vanderwaltozyma polyspora DSM
70294]
gi|160380610|sp|A7TTT5.1|DBP2_VANPO RecName: Full=ATP-dependent RNA helicase DBP2
gi|156112620|gb|EDO14321.1| hypothetical protein Kpol_165p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 441
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 123/241 (51%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY +A + S +R++ ++ I PKPI ++ + G +LE
Sbjct: 73 FEKNFYQEAESVKARSDQEINEFRREHEMTITGHDIPKPITSFDEAGFPDYVLEEVKAEG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
E P IQ + +SG D + + TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 133 FEKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPIVLV 191
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
+APT EL QQ+R GR+ID+L
Sbjct: 192 LAPTRELAVQIQKECSKFGSSSRIRNSCVYGGVPRGQQIRELSRGAEIVIATPGRLIDML 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 252 ---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQL 308
Query: 282 A 282
A
Sbjct: 309 A 309
>gi|170058665|ref|XP_001865019.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167877695|gb|EDS41078.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 686
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 127/247 (51%), Gaps = 47/247 (19%)
Query: 81 DYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETF 136
D KNFY + +I +S AY +L++ ++ + P+P T+ GL ILE
Sbjct: 72 DLTPFEKNFYKPSEQIMALSETDFNAYLAKLEITLKGRDIPRPCITFGDCGLPDYILEET 131
Query: 137 SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSP 196
K P AIQA + ++G D V I +TGSGKTLA++ P L HI Q V G D P
Sbjct: 132 VKQGFTKPTAIQAQGMPIAMTGRDMVGIAQTGSGKTLAYVAPALVHIQHQETVHRG-DGP 190
Query: 197 VGLVMAPTGELVRQ---------------------------QVRR------------GRM 217
+ L++APT EL +Q Q+R GR+
Sbjct: 191 IALILAPTRELAQQIQQVANDFGQRTNTNNTCVFGGAPKGPQIRDLERGAEIVIATPGRL 250
Query: 218 IDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPR 277
ID L + ITNL R TYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P
Sbjct: 251 IDFLERG---ITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKE 307
Query: 278 VEILARK 284
V LA +
Sbjct: 308 VRNLAEE 314
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN+D P++ EDYVH ++ + A+ + NA A D
Sbjct: 418 VATDVAARGLDVEDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTNSNANKAGD 477
Query: 349 LVKAFELSELVVRDDL 364
L+ + V+ L
Sbjct: 478 LINVLREANQVINPKL 493
>gi|380027508|ref|XP_003697465.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 607
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 124/241 (51%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
LRK+FY + + S +R+ ++ I+ P PI+ + + +LE K
Sbjct: 73 LRKDFYIEHPTVRSRSKEEVCQFRENAEITIKGDNIPNPIQYFEEGNFPPYVLEEIHKQG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P AIQA + +SG D VAI +TGSGKTL ++LP + HI QP + G D P+ L+
Sbjct: 133 YSQPTAIQAQGWPIALSGRDLVAIAQTGSGKTLGYVLPAIVHIIHQPRLSNG-DGPIALI 191
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q VR GR+ID L
Sbjct: 192 LAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERGVEICIATPGRLIDFL 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 252 ERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRAL 308
Query: 282 A 282
A
Sbjct: 309 A 309
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD +++ VINFD P+ EDY+H ++ + A+ F + N +A D
Sbjct: 415 VATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGD 474
Query: 349 LVKAF 353
L++
Sbjct: 475 LIEVL 479
>gi|389614656|dbj|BAM20360.1| DEAD box ATP-dependent RNA helicase [Papilio polytes]
Length = 539
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 125/243 (51%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q KNFY E+ S YR + ++ + P PI+ + + +++ S
Sbjct: 64 QPFNKNFYNPPPEVLNRSAYEVEEYRNKHEITVSGLDIPNPIQHFVEGNFPDYVMQNISN 123
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ ++ P IQA + +SG + V I +TGSGKTLA++LP + HI QPP+ G D P+
Sbjct: 124 MGYKEPTPIQAQGWPIAMSGHNLVGIAQTGSGKTLAYILPAIVHINNQPPIRRG-DGPIA 182
Query: 199 LVMAPTGELV---------------------------RQQVRR------------GRMID 219
LV+APT EL R+Q R GR+ID
Sbjct: 183 LVLAPTRELAQQIQQVACDFGNASYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 242
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+
Sbjct: 243 FLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVK 299
Query: 280 ILA 282
LA
Sbjct: 300 KLA 302
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++ VINFD PN EDY+H +S K ++ F + N+ A D
Sbjct: 410 VATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSNSRQAKD 469
Query: 349 LVKAFELSELVVRDDLKAVAD 369
LV + + + L+ +AD
Sbjct: 470 LVNVLQEANQTISPQLQTMAD 490
>gi|449662055|ref|XP_002163251.2| PREDICTED: ATP-dependent RNA helicase DDX42-like [Hydra
magnipapillata]
Length = 790
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 125/249 (50%), Gaps = 47/249 (18%)
Query: 78 IKIDYQQLRKNFYTQAREITRMS-PA---YRKQLDLKIREKCAPKPIKTWRQTGLTTKIL 133
++IDY NFY +I ++ PA R++L LK+ +P ++ G ++
Sbjct: 229 LEIDYPPFESNFYEDHPDIKALTEPAVKNLREKLGLKVMGADPARPAISFGHFGFDDHLM 288
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
N+ P IQ+ A + +SG D + I TGSGKT AF+ PML HI QP + GD
Sbjct: 289 GVIRSSNYSKPTPIQSQAVPVALSGRDIIGIARTGSGKTAAFVWPMLVHIMAQPVLKEGD 348
Query: 194 DSPVGLVMAPTGELVRQ---QVRR------------------------------------ 214
P+ L+ APT EL +Q + +R
Sbjct: 349 -GPIALICAPTRELCQQINSECKRFGKCYNLRSVACYGGGSKWEQTKGLQQGAEIVVCTP 407
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+IDL+ K TNL RVTYLV DEADRMFDMGFEPQ+ I N+RPDRQ +LFS T
Sbjct: 408 GRLIDLI---KAKATNLLRVTYLVFDEADRMFDMGFEPQVRSIANNVRPDRQCLLFSATM 464
Query: 275 PPRVEILAR 283
+VE L R
Sbjct: 465 KKKVEWLCR 473
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 22/125 (17%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + H ++ K A+ I+ ++ +A D
Sbjct: 576 VATDVAARGLDIPSIKTVINYDVARDITTHTHRIGRTGRAGEKGIAYTLITPQDTHFAAD 635
Query: 349 LVKAFELSELVVRDDL-------------------KAVADSFIAKVNLGLGQVHGTGHGG 389
LV+ E + V D+L KA F + GLG G G G
Sbjct: 636 LVRNLEGANQRVPDELLDLALKNPWFRKTRAKRGRKAANKEFTPRDRPGLGLPEGKGGGN 695
Query: 390 VALNL 394
NL
Sbjct: 696 DEGNL 700
>gi|224135925|ref|XP_002322195.1| predicted protein [Populus trichocarpa]
gi|222869191|gb|EEF06322.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 123/246 (50%), Gaps = 47/246 (19%)
Query: 81 DYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETF 136
D KN Y + I MS +R + ++ + P+PI+ + + L+
Sbjct: 24 DLVPFEKNLYFENPSIRAMSEHEVVTFRARREITVEGHDVPRPIRIFHEANFPDYCLQVI 83
Query: 137 SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSP 196
+KL P IQA + + G D + I ETGSGKTLA+LLP H+ QP +V G D P
Sbjct: 84 AKLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAFVHVAAQPRLVHG-DGP 142
Query: 197 VGLVMAPTGELVRQ---------------------------QVRR------------GRM 217
+ LV+APT EL Q Q+R GR+
Sbjct: 143 IVLVLAPTRELAVQIQEEALKFGSKANIRSTCIYGGAPKGPQIRDLQRGVEIVIATPGRL 202
Query: 218 IDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPR 277
ID+L G + NL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S T+P
Sbjct: 203 IDML---GAQHVNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLYWSATWPRE 259
Query: 278 VEILAR 283
VE LAR
Sbjct: 260 VEALAR 265
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + A V ARGLD K+++ V+N+D P+ EDYVH ++ + A F +E
Sbjct: 360 KSGRSPIMTATDVAARGLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGARGTALTFFTE 419
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADS 370
NA +A DL+K + + +V L A+ S
Sbjct: 420 SNAKFARDLIKILQEAGQIVPPSLSAMTRS 449
>gi|444318435|ref|XP_004179875.1| hypothetical protein TBLA_0C05580 [Tetrapisispora blattae CBS 6284]
gi|387512916|emb|CCH60356.1| hypothetical protein TBLA_0C05580 [Tetrapisispora blattae CBS 6284]
Length = 540
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 122/242 (50%), Gaps = 47/242 (19%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + S +RK+ ++ I PKPI + + G +L
Sbjct: 73 FEKNFYVEHEVVKNRSDEEISKFRKENEMTISGHDIPKPITNFDEAGFPDYVLNEVKAEG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
NP AIQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 133 FANPTAIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPG-DGPIVLV 191
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
++PT EL QQ+R GR+ID+L
Sbjct: 192 LSPTRELAVQIQKECSKFGKSSRIRNTCVYGGVPKGQQIRDLSRGSEIVIATPGRLIDML 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 252 ---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQNL 308
Query: 282 AR 283
AR
Sbjct: 309 AR 310
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARG+D K + VIN+D P + EDYVH ++ A F +EEN
Sbjct: 413 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEENKSLG 472
Query: 347 TDLV 350
L+
Sbjct: 473 ASLI 476
>gi|340725165|ref|XP_003400944.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
terrestris]
Length = 605
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 130/254 (51%), Gaps = 49/254 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
LRK+FY + + S +R+ ++ I+ P PI+ + + +L+ K
Sbjct: 73 LRKDFYIEHPTVRSRSKEEVCQFRENAEITIKGDNIPNPIQYFEEGNFPPYVLDEIHKQG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P AIQA + +SG D VAI +TGSGKTL ++LP + HI QP + G D P+ L+
Sbjct: 133 YSQPTAIQAQGWPIALSGRDLVAIAQTGSGKTLGYVLPAIVHIIHQPRLGNG-DGPIALI 191
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q VR GR+ID L
Sbjct: 192 LAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERGVEICIATPGRLIDFL 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 252 ERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRAL 308
Query: 282 ARK--TNVCNLSIA 293
A T+ +L+I
Sbjct: 309 AEDFLTDYTHLNIG 322
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD +++ VINFD P+ EDY+H ++ + A+ F + N +A D
Sbjct: 415 VATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHAGD 474
Query: 349 LVKAF 353
L++
Sbjct: 475 LIEVL 479
>gi|451996737|gb|EMD89203.1| hypothetical protein COCHEDRAFT_1141168 [Cochliobolus
heterostrophus C5]
Length = 539
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S A YRK+ + ++ PKP+ T+ + G + ++
Sbjct: 76 KFEKSFYKEDPAVTARSEAEVAEYRKEHQMTVKGTNIPKPVTTFDEAGFPSYVMNEVKAQ 135
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V + ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 136 GFAKPTAIQAQGWPMALSGRDVVGVAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 194
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 195 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLARGVEVCIATPGRLIDM 254
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 255 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 311
Query: 281 LA 282
LA
Sbjct: 312 LA 313
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V N+D PN+ EDYVH ++ A +
Sbjct: 411 KTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYVHRIGRTGRAGANGTAITLFTT 470
Query: 341 ENAIYATDLVKAFELSE 357
EN+ A DLV+ S+
Sbjct: 471 ENSKQARDLVQILTESK 487
>gi|327284970|ref|XP_003227208.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Anolis
carolinensis]
Length = 647
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 133/262 (50%), Gaps = 57/262 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIR--EKCAPKPIKTWRQTGLTTKILETFS 137
+ KNFY++ E+ R++P R++ ++ IR + C PKP+ + Q +++
Sbjct: 44 KFEKNFYSEHPEVARLTPYEVDELRRKKEITIRGSDGC-PKPVFAFHQCNFPQYVMDVLM 102
Query: 138 KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPV 197
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 103 DQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPI 161
Query: 198 GLVMAPTGELVRQ---------------------------QVRR------------GRMI 218
LV+APT EL +Q Q+R GR+I
Sbjct: 162 CLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLI 221
Query: 219 DLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRV 278
D L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 222 DFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEV 278
Query: 279 EILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 279 RQLAEDFLHDYVQINVGNLELS 300
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 388 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 447
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 448 LIKVLEEANQAINPKLMQLVD 468
>gi|432867546|ref|XP_004071236.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oryzias latipes]
Length = 903
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + E++ ++ + R++L+L++ PK ++ G +++
Sbjct: 205 EIDYPPFEKNFYNEHEELSSLTGSQVVELRQKLNLRVSGAAPPKLCTSFAHFGFDEQLMH 264
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG +
Sbjct: 265 QIRKSEYTQPTPIQCQGVPIALSGRDMIGIAKTGSGKTAAFIWPMLVHIMDQKELEPG-E 323
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 324 GPIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 383
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K T+L RVTYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 384 RLIDHVKK---KATSLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 440
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 441 KKIERLAR 448
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD + V+N+D D + + H ++ K A+ ++ ++ +A D
Sbjct: 551 VATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTNKDTSFAGD 610
Query: 349 LVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ + + K G+ GG L +R
Sbjct: 611 LVRNLEGANQAVSKELMDLAMQNPWFRKSRFKGGKGKRLNIGGGGLGYKER 661
>gi|328779178|ref|XP_623193.3| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Apis
mellifera]
Length = 588
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 124/241 (51%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
LRK+FY + + S +R+ ++ I+ P PI+ + + +LE K
Sbjct: 73 LRKDFYIEHPTVRSRSKEEVCQFRENAEITIKGDNIPNPIQYFEEGNFPPYVLEEIHKQG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P AIQA + +SG D VAI +TGSGKTL ++LP + HI QP + G D P+ L+
Sbjct: 133 YSQPTAIQAQGWPIALSGRDLVAIAQTGSGKTLGYVLPAIVHIIHQPRLSNG-DGPIALI 191
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q VR GR+ID L
Sbjct: 192 LAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERGVEICIATPGRLIDFL 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 252 ERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRAL 308
Query: 282 A 282
A
Sbjct: 309 A 309
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD +++ VINFD P+ EDY+H ++ + A+ F + N +A D
Sbjct: 415 VATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGD 474
Query: 349 LVKAF 353
L++
Sbjct: 475 LIEVL 479
>gi|358382238|gb|EHK19911.1| hypothetical protein TRIVIDRAFT_83250 [Trichoderma virens Gv29-8]
Length = 549
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 130/242 (53%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY ++ +++ S A +R++ + I + PKP++T+ + G +++
Sbjct: 93 KFEKDFYKESPDVSARSSAEVDDFRRKHQMTIAGREVPKPVETFDEAGFPRYVMDEVKAQ 152
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 153 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 211
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 212 ILAPTRELAVQIQQEISKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 271
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 272 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRA 328
Query: 281 LA 282
LA
Sbjct: 329 LA 330
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ A +
Sbjct: 428 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGQHGTAITLFTT 487
Query: 341 ENAIYATDLVKAFE 354
+N A DLV +
Sbjct: 488 DNQKQARDLVNVLQ 501
>gi|340905419|gb|EGS17787.1| ATP-dependent RNA helicase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 615
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 147/298 (49%), Gaps = 60/298 (20%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S A +R+ ++ + + PKP++T+ + G +++
Sbjct: 88 KFEKSFYKEHPNVTARSMAEVEKFRRDHNITVSGRDVPKPVETFDEAGFPRYVMDEVKAQ 147
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 148 GFPAPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 206
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
V+APT EL ++Q++ + GR+ID+
Sbjct: 207 VLAPTRELAVQIQQEINKFGKSSRIRNTCIYGGVPKGPQIRDLQRGVEVCIATPGRLIDM 266
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 267 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMWSATWPKEVRN 323
Query: 281 LAR-------KTNVCNLSIANSVRARGL------DEKELELVINFDAPNDYEDYVHHC 325
LA + N+ +L +A + R + EK L+ + + D D + C
Sbjct: 324 LAADFLTDFIQVNIGSLDLAANHRITQIVEVISESEKRDRLIKHLEKIMDSRDTQNKC 381
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 304 KELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATDLVKAFE 354
+ + VIN+D PN+ EDY+H ++ K A F + ENA A DLV +
Sbjct: 504 RNITHVINYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENAKQARDLVSVLQ 557
>gi|350412504|ref|XP_003489670.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Bombus
impatiens]
Length = 605
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 130/254 (51%), Gaps = 49/254 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
LRK+FY + + S +R+ ++ I+ P PI+ + + +L+ K
Sbjct: 73 LRKDFYIEHPTVRSRSKEEVCQFRENAEITIKGDNIPNPIQYFEEGNFPPYVLDEIHKQG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P AIQA + +SG D VAI +TGSGKTL ++LP + HI QP + G D P+ L+
Sbjct: 133 YSQPTAIQAQGWPIALSGRDLVAIAQTGSGKTLGYVLPAIVHIIHQPRLGNG-DGPIALI 191
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q VR GR+ID L
Sbjct: 192 LAPTRELAQQIQEVANCFGEAAGVRNTCIFGGAPKGPQAHDLERGVEICIATPGRLIDFL 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 252 ERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRAL 308
Query: 282 ARK--TNVCNLSIA 293
A T+ +L+I
Sbjct: 309 AEDFLTDYTHLNIG 322
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD +++ VINFD P+ EDY+H ++ + A+ F + N +A D
Sbjct: 415 VATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTTHNMKHAGD 474
Query: 349 LVKAF 353
L++
Sbjct: 475 LIEVL 479
>gi|134025992|gb|AAI35356.1| LOC549535 protein [Xenopus (Silurana) tropicalis]
Length = 420
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 129/260 (49%), Gaps = 54/260 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFYT+ E+ RM+ R++ ++ IR PKPI + Q +L+
Sbjct: 41 KFEKNFYTEHPEVARMTQHDVEELRRKKEITIRGVNCPKPIYGFHQANFPQYVLDVLIDQ 100
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P IQ L +SG D V I +TGSGKTLA LLP + HI QP + GD P+ L
Sbjct: 101 RFKEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAHLLPAMVHINHQPYLERGD-GPICL 159
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 160 VLAPTRELAQQVQQVADDYGKSSRLKSTCIYGGAPKGPQIRYLERGVEICIATPGRLIDF 219
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 220 L---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 276
Query: 281 LAR-------KTNVCNLSIA 293
LA + N+ NL ++
Sbjct: 277 LAEDFLRDYVQINIGNLELS 296
>gi|209878704|ref|XP_002140793.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209556399|gb|EEA06444.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 562
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 98/261 (37%), Positives = 136/261 (52%), Gaps = 47/261 (18%)
Query: 69 KNREIIKSKIKIDYQQ-----LRKNFYTQAREITRMSP----AYRKQLDLK-IREKCAPK 118
++ E+ +ID++ KNFY + + IT++S RK + I PK
Sbjct: 85 RHHELDDRLARIDWKSQYLIPFEKNFYFEHQNITKLSEDEANEIRKSKRITLIAGSNVPK 144
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
PI ++ ++ +++ + P AIQ + +SG D + I ETGSGKTL FLLP
Sbjct: 145 PITSFDESSFPDFLIDALYRAGFTEPTAIQVQGWPVALSGRDMIGIAETGSGKTLGFLLP 204
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELV---RQQVRR-----------------GRMI 218
+ HI QP + G D P+ L++APT ELV R+Q R R
Sbjct: 205 SMVHISAQPRLRYG-DGPICLILAPTRELVEQIREQANRFGNILRIRNTAVYGGVPKRSQ 263
Query: 219 DLLCKNGVKI----------------TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIR 262
+ +NGV+I TNL+RVTYLVLDEADRM DMGFEPQI ++V IR
Sbjct: 264 QISLRNGVEICIACPGRLIDFLEEGCTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIR 323
Query: 263 PDRQAVLFSPTFPPRVEILAR 283
PDRQ +L+S T+P V+ LAR
Sbjct: 324 PDRQTLLWSATWPKEVQKLAR 344
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 4/90 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ IA V ARGLD K++ V+N+D PN EDY+H ++ + F + + A
Sbjct: 449 IMIATDVAARGLDVKDITFVVNYDFPNQMEDYIHRIGRTGRAGASGVSLSFFTADKCRLA 508
Query: 347 TDLVKAFELSELVVRDDLKAVADSFIAKVN 376
DLV+ ++ + +L + S KVN
Sbjct: 509 NDLVRVLREAKQDIPPELTKLGTSHY-KVN 537
>gi|157126319|ref|XP_001654592.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882564|gb|EAT46789.1| AAEL002083-PA [Aedes aegypti]
Length = 699
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 126/243 (51%), Gaps = 47/243 (19%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
K+FY + I+ +S Y +L++ ++ + P+P + Q GL ILE +K
Sbjct: 82 FEKDFYKPSEFISNLSETDVKGYLAKLEITLKGRNIPRPSMEFEQGGLPDYILEEANKQG 141
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQA + +SG D V I +TGSGKTLA++ P L HI Q + G D P+ LV
Sbjct: 142 FSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALVHITHQDQLRRG-DGPIALV 200
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q+R GR+ID L
Sbjct: 201 LAPTRELAQQIQQVATDFGQRINANNTCVFGGAPKGPQIRDLERGAEIVIATPGRLIDFL 260
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ ITNL R TYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V L
Sbjct: 261 ERG---ITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKEVRNL 317
Query: 282 ARK 284
A +
Sbjct: 318 AEE 320
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN+D P++ EDYVH ++ + A+ + NA A D
Sbjct: 424 VATDVAARGLDVEDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTNSNANKAGD 483
Query: 349 LVKAFELSELVVRDDLKAVA 368
L+ + V+ L +A
Sbjct: 484 LINVLREANQVINPKLAEMA 503
>gi|126644118|ref|XP_001388195.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117268|gb|EAZ51368.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
Length = 586
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 126/244 (51%), Gaps = 50/244 (20%)
Query: 85 LRKNFYTQAREITRMSPAYRKQLDLK-----IREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY + ++ +S Q+ + I + PKPI ++ +G +++ +
Sbjct: 127 FEKNFYHEHESVSSLSNEQVDQIRKERKITIIAGENVPKPITSFVTSGFPNFLVDALYRT 186
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ + +SG D + I ETGSGKTL FLLP + HI QP + GD P+ L
Sbjct: 187 GFTEPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFLLPAMIHIRAQPLLRYGD-GPICL 245
Query: 200 VMAPTGELVRQQVRR----------------------------------------GRMID 219
V+APT ELV +Q+R GR+ID
Sbjct: 246 VLAPTRELV-EQIREQANQFGSIFKLRNTAIYGGVPKRPQQASIRNGVEICIACPGRLID 304
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
LL + TNL+RVTYLVLDEADRM DMGFEPQI ++V IRPDRQ +L+S T+P V+
Sbjct: 305 LLEEG---YTNLSRVTYLVLDEADRMLDMGFEPQIRKLVSQIRPDRQTLLWSATWPKEVQ 361
Query: 280 ILAR 283
LAR
Sbjct: 362 KLAR 365
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
+T + IA V ARGLD K++ VINFD PN EDY+H ++ + F +
Sbjct: 464 RTGASPIMIATDVAARGLDIKDINFVINFDFPNQIEDYIHRIGRTGRAGATGVSLSFFTP 523
Query: 341 ENAIYATDLVKAFE 354
+ A+DL+K +
Sbjct: 524 DKYRMASDLIKVLK 537
>gi|414879082|tpg|DAA56213.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 571
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 130/252 (51%), Gaps = 50/252 (19%)
Query: 79 KIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D++ L KNFY + + MS A YR+ D+ I + PKP++ +++
Sbjct: 104 KPDFRSLIPFEKNFYVECPSVQAMSEADVAQYRRLRDITIEGRDVPKPVRYFQEANFPDY 163
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
++ +K P IQ+ + + G D + I +TGSGKTL++LLP L H+ QP +
Sbjct: 164 CMQAIAKSGFVEPTPIQSQGWPMALKGRDLIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQ 223
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ L++APT EL Q Q+R
Sbjct: 224 G-DGPIVLILAPTRELAVQIQEESTKFGSYSRTRSTCVYGGAPKGPQIRDLRRGVEIVIA 282
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S
Sbjct: 283 TPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSA 339
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 340 TWPREVEALARQ 351
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDY+H ++ AF F +
Sbjct: 445 KSGKSPIMAATDVAARGLDVKDIKCVINYDFPTTLEDYIHRIGRTGRAGASGTAFTFFTH 504
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADS 370
NA ++ +LVK + VV L++++ S
Sbjct: 505 ANAKFSRNLVKILREAGQVVNPALESMSRS 534
>gi|295669632|ref|XP_002795364.1| pre-mRNA-processing ATP-dependent RNA helicase prp5
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226285298|gb|EEH40864.1| pre-mRNA-processing ATP-dependent RNA helicase prp5
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 532
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 101/169 (59%), Gaps = 40/169 (23%)
Query: 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----- 210
+SG D + + +TGSGKT+AFLLPM RHI +Q P+ + P+GLVM PT EL Q
Sbjct: 1 MSGRDVIGVAKTGSGKTIAFLLPMFRHIKDQRPL-ENMEGPIGLVMTPTRELATQIHKEC 59
Query: 211 -------------------------QVRRG---------RMIDLLCKNGVKITNLTRVTY 236
+++RG RMIDLL N ++TNL RVTY
Sbjct: 60 KPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTY 119
Query: 237 LVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+VLDEADRMFDMGFEPQ+ +I+ N+RP RQ VLFS TFP +E LARKT
Sbjct: 120 VVLDEADRMFDMGFEPQVMKILGNVRPQRQTVLFSATFPRNMEALARKT 168
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++E
Sbjct: 265 KAGVFPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 324
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
Y+ D+ KA + S V + ++ + +SFI KV G + G+G GG L
Sbjct: 325 VQERYSVDISKALKQSGQQVPEAVQKMVNSFIEKVKAGKEKASGSGFGGKGL 376
>gi|256273812|gb|EEU08734.1| Dbp2p [Saccharomyces cerevisiae JAY291]
Length = 547
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 122/241 (50%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + S + +RK+ ++ I PKPI T+ + G +L
Sbjct: 73 FEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 133 FDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPG-DGPIVLV 191
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
+APT EL QQ+R GR+ID+L
Sbjct: 192 LAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDML 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 252 ---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQL 308
Query: 282 A 282
A
Sbjct: 309 A 309
>gi|345497627|ref|XP_001602045.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Nasonia
vitripennis]
Length = 634
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 122/245 (49%), Gaps = 47/245 (19%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q RK+FY + P AYR ++ I+ P P + + G +L +
Sbjct: 83 QPFRKDFYQPHSNVDSRGPHVVEAYRSDKEITIKGTNVPGPNIYFEEGGFPDYVLNEIRR 142
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P AIQA + +SG D V I +TGSGKTLA++LP + HI QP + G D P+
Sbjct: 143 QGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINNQPRLQRG-DGPIA 201
Query: 199 LVMAPTGELVRQ------------QVRR---------------------------GRMID 219
LV+APT EL +Q QVR GR+ID
Sbjct: 202 LVLAPTRELAQQIQQVAADFGVSSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRLID 261
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L + TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 262 FLERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVR 318
Query: 280 ILARK 284
LA +
Sbjct: 319 NLAEE 323
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN D P++ EDYVH +S A+ F + NA A D
Sbjct: 427 VATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKAND 486
Query: 349 LVKAFELSELVVRDDL 364
L++ E ++ VV L
Sbjct: 487 LIQVLEEAKQVVNPKL 502
>gi|1183961|emb|CAA93395.1| RNA elicase [Saccharomyces cerevisiae]
Length = 547
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 122/241 (50%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + S + +RK+ ++ I PKPI T+ + G +L
Sbjct: 73 FEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 133 FDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPG-DGPIVLV 191
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
+APT EL QQ+R GR+ID+L
Sbjct: 192 LAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDML 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 252 ---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQL 308
Query: 282 A 282
A
Sbjct: 309 A 309
>gi|166797029|gb|AAI59199.1| Ddx5 protein [Danio rerio]
Length = 488
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++ R S YR+ ++ ++ + PKPI + + +++ +K
Sbjct: 55 KFEKNFYQENPDVARRSAQEVEHYRRSKEITVKGRDGPKPIVKFHEANFPKYVMDVITKQ 114
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N +P IQA + +SG D V I +TGSGKTL++LLP + HI QP + GD P+ L
Sbjct: 115 NWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGD-GPICL 173
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q+R GR+ID
Sbjct: 174 VLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDF 233
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 234 L---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQ 290
Query: 281 LA 282
LA
Sbjct: 291 LA 292
>gi|448509275|ref|XP_003866103.1| Dbp2 protein [Candida orthopsilosis Co 90-125]
gi|380350441|emb|CCG20663.1| Dbp2 protein [Candida orthopsilosis Co 90-125]
Length = 562
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 123/243 (50%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFYT+ + S A+R + ++ ++ P PI T+ + G +L
Sbjct: 84 KFEKNFYTEHPNVAARSDADIEAFRNKNEMSVQGHDIPHPITTFDEAGFPDYVLNELKAQ 143
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ + +SG D V I TGSGKTL++ LP + HI QP + PGD P+ L
Sbjct: 144 GFPKPTAIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLKPGD-GPIVL 202
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 203 VLAPTRELACQIQTECSKFGSSSRIRNTCVYGGAPKGPQIRDLAKGVEICIATPGRLIDM 262
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 263 LEAGK---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQA 319
Query: 281 LAR 283
LAR
Sbjct: 320 LAR 322
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVH 323
++ +A V ARG+D K + VIN+D P + EDYVH
Sbjct: 424 SIMVATDVAARGIDVKGITHVINYDMPGNIEDYVH 458
>gi|300120970|emb|CBK21212.2| unnamed protein product [Blastocystis hominis]
Length = 617
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 141/265 (53%), Gaps = 52/265 (19%)
Query: 78 IKIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTT 130
I+ D QL KNFY + IT+M + +R + + + PKP+ ++ +
Sbjct: 142 IQWDMNQLIKFEKNFYHEHPAITKMPDSEVEQWRHDNQIICQGENIPKPVLSFDVSPFPA 201
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
+L+ + + P IQ+ + +SG D V I TGSGKTLAF+LP + HI QP +
Sbjct: 202 DVLDVIHRAGFKAPTPIQSQGWPMALSGRDVVGIAATGSGKTLAFILPAIIHIRAQPMLR 261
Query: 191 PGDDSPVGLVMAPTGELV---------------------------RQQ---VRRG----- 215
PGD P+ LV++PT EL RQQ +RRG
Sbjct: 262 PGD-GPICLVLSPTRELANQTQEECARFGTSSGIRNTCVYGGVPRRQQAYDLRRGAEIVI 320
Query: 216 ----RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
R++D L ++GV TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +++S
Sbjct: 321 ATPGRLLDFL-ESGV--TNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWS 377
Query: 272 PTFPPRVEILARK--TNVCNLSIAN 294
T+P V+ LAR TN ++I +
Sbjct: 378 ATWPKEVQALARDFLTNPIQVNIGS 402
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC-------AFR 336
K+ + +A V +RGLD K++ +VIN+D P+ EDY+H ++ K+ A
Sbjct: 484 KSGRVTIMVATDVASRGLDVKDIRVVINYDFPSCVEDYIHRVGRAGRKTADGYSEGMAVS 543
Query: 337 FISEENAIYATDLVKAF 353
F ++ +A +L+K
Sbjct: 544 FFTDTSAKVTRELIKVL 560
>gi|160380611|sp|A6ZRX0.1|DBP2_YEAS7 RecName: Full=ATP-dependent RNA helicase DBP2; AltName: Full=DEAD
box protein 2; AltName: Full=p68-like protein
gi|151944424|gb|EDN62702.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae YJM789]
gi|190409099|gb|EDV12364.1| ATP dependent RNA helicase [Saccharomyces cerevisiae RM11-1a]
gi|259149249|emb|CAY82491.1| Dbp2p [Saccharomyces cerevisiae EC1118]
gi|349580827|dbj|GAA25986.1| K7_Dbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 546
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 122/241 (50%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + S + +RK+ ++ I PKPI T+ + G +L
Sbjct: 73 FEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 133 FDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPG-DGPIVLV 191
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
+APT EL QQ+R GR+ID+L
Sbjct: 192 LAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDML 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 252 ---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQL 308
Query: 282 A 282
A
Sbjct: 309 A 309
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARG+D K + VIN+D P + EDYVH ++ A F +E+N
Sbjct: 413 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLG 472
Query: 347 TDLV 350
L+
Sbjct: 473 AKLI 476
>gi|398364809|ref|NP_014287.3| Dbp2p [Saccharomyces cerevisiae S288c]
gi|118284|sp|P24783.1|DBP2_YEAST RecName: Full=ATP-dependent RNA helicase DBP2; AltName: Full=DEAD
box protein 2; AltName: Full=p68-like protein
gi|5272|emb|CAA36874.1| p68 protein [Saccharomyces cerevisiae]
gi|1302034|emb|CAA95991.1| DBP2 [Saccharomyces cerevisiae]
gi|285814541|tpg|DAA10435.1| TPA: Dbp2p [Saccharomyces cerevisiae S288c]
Length = 546
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 122/241 (50%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + S + +RK+ ++ I PKPI T+ + G +L
Sbjct: 73 FEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 133 FDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPG-DGPIVLV 191
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
+APT EL QQ+R GR+ID+L
Sbjct: 192 LAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDML 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 252 ---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQL 308
Query: 282 A 282
A
Sbjct: 309 A 309
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARG+D K + VIN+D P + EDYVH ++ A F +E+N
Sbjct: 413 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLG 472
Query: 347 TDLV 350
L+
Sbjct: 473 AKLI 476
>gi|348509262|ref|XP_003442169.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Oreochromis
niloticus]
Length = 909
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 127/248 (51%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + E++ ++ R +L+L++ PKP ++ +++
Sbjct: 206 EIDYPPFEKNFYEEHEELSSLTGTQVLELRHKLNLRVSGAAPPKPCTSFAHFNFDEQLMH 265
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG +
Sbjct: 266 QIRKSEYTQPTPIQCQGVPIALSGRDMIGIAKTGSGKTAAFIWPMLVHIMDQKELEPG-E 324
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 325 GPIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 384
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K T+L RVTYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 385 RLIDHVKK---KATSLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 441
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 442 KKIERLAR 449
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD + V+N+D D + + H ++ K A+ ++ ++ +A D
Sbjct: 552 VATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTNKDTSFAGD 611
Query: 349 LVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ + + K G+ GG L +R
Sbjct: 612 LVRNLEGANQSVSKELMDLAMQNPWFRKSRFKGGKGKKLNIGGGGLGYRER 662
>gi|270004664|gb|EFA01112.1| hypothetical protein TcasGA2_TC010324 [Tribolium castaneum]
Length = 574
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 49/242 (20%)
Query: 85 LRKNFYTQAREITRMSPAY-----RKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+K+FY +T P+Y R++ ++ ++ KC P + T+ + G ++ K+
Sbjct: 91 FKKDFYVPHPNVTN-RPSYEVEEWRREKEITLKGKCIPDLVFTFEEAGFPDYVMSEIRKM 149
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
++P IQ+ + +SG D V I TGSGKTL+++LP + HI QP ++ G D P+ L
Sbjct: 150 GFKHPTPIQSQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINHQPRLLRG-DGPIAL 208
Query: 200 VMAPTGELVRQ------------QVRR---------------------------GRMIDL 220
V+APT EL +Q ++R GR+ID
Sbjct: 209 VLAPTRELAQQIQQVATDFGRSSKIRNTCVFGGAPKGPQANDLMDGVEIVIATPGRLIDF 268
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+
Sbjct: 269 LESNR---TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVQA 325
Query: 281 LA 282
LA
Sbjct: 326 LA 327
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 10/133 (7%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V ARGLD ++++ VINFD P++ EDYVH +S A+ F +
Sbjct: 425 RTGKAPILVATDVAARGLDVEDVKFVINFDYPSNSEDYVHRIGRTGRSQRTGTAYTFFTP 484
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVA---LNLMKR 397
NA A DLV + ++ V+ L+ +AD+ N G G G +A + R
Sbjct: 485 ANANKAADLVSVLKEAKQVINPKLQEMADN----RNWSSNGSSGRGRGLLAEEDATEVDR 540
Query: 398 RIRRGKQLRKAQA 410
G++ R AQA
Sbjct: 541 ETEIGERSRVAQA 553
>gi|342889601|gb|EGU88639.1| hypothetical protein FOXB_00888 [Fusarium oxysporum Fo5176]
Length = 1045
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T S A+R++ + I K P+P++T+ + G +++
Sbjct: 557 KFEKSFYKEHPDVTNRSDADVEAFRRKHQMTIAGKDVPRPVETFDEAGFPRYVMDEVKAQ 616
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 617 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPG-DGPIVL 675
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 676 VLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 735
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 736 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRA 792
Query: 281 LA 282
LA
Sbjct: 793 LA 794
>gi|47217820|emb|CAG07234.1| unnamed protein product [Tetraodon nigroviridis]
Length = 737
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/247 (35%), Positives = 127/247 (51%), Gaps = 47/247 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
IDY KNFY + E++ ++ R++L+L++ PKP ++ G +++
Sbjct: 56 IDYPPFEKNFYNEHEELSSLNGTQVIELRQKLNLRVSGAAPPKPSTSFAHFGFDEQLMHQ 115
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + G +
Sbjct: 116 IRKSEYTQPTPIQCQGVPIALSGRDMIGIAKTGSGKTAAFIWPMLVHIMDQKELEAG-EG 174
Query: 196 PVGLVMAPTGELVRQ---QVRR------------------------------------GR 216
P+ +++ PT EL +Q + +R GR
Sbjct: 175 PIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPGR 234
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID + K K T+L RVTYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 235 LIDHVKK---KATSLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 291
Query: 277 RVEILAR 283
++E LAR
Sbjct: 292 KIERLAR 298
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 283 RKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFIS 339
+K+N+ L +A V ARGLD + V+N+D D + + H ++ K A+ ++
Sbjct: 393 KKSNMPIL-VATDVAARGLDIPSIRTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLT 451
Query: 340 EENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
+++ +A DLV+ E + V +L A+ + + K G+ GG L +R
Sbjct: 452 SKDSSFAGDLVRNLEGANQAVSKELMDLAMQNPWFRKSRFKAGKGKKPNIGGGGLGYKER 511
>gi|407927140|gb|EKG20043.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 462
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 123/242 (50%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ + YRK + ++ + PKP+ T+ + G + ++
Sbjct: 20 KFEKSFYKEHPDVAARTAQEVDEYRKAHQIAVQGRDVPKPVTTFDEAGFPSYVMNEVKAQ 79
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQA + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 80 GFEKPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 138
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 139 ILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGGQIRDLARGVEVCIATPGRLIDM 198
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 199 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 255
Query: 281 LA 282
LA
Sbjct: 256 LA 257
>gi|159463584|ref|XP_001690022.1| DEAD-box RNA helicase [Chlamydomonas reinhardtii]
gi|158284010|gb|EDP09760.1| DEAD-box RNA helicase [Chlamydomonas reinhardtii]
Length = 513
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 128/243 (52%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K FY + ++ +P YR++ + + PKP+KT+ + +LE +
Sbjct: 68 KFEKCFYLEHPAVSGRTPEEVEQYRREKQIHVYGDGVPKPVKTFEEASFPEYVLEEVLRA 127
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P IQ + + G D + + ETGSGKTLA+LLP + HI QP + GD P+ L
Sbjct: 128 GFKEPTPIQCQGWPMALLGRDLIGLAETGSGKTLAYLLPAVVHINAQPYLQSGD-GPIVL 186
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
V+APT EL ++Q+ +R GR+ID+
Sbjct: 187 VLAPTRELAVQIQQECQRFGASSRIKNTVVYGGAPKGPQARDLRGGVEIVIATPGRLIDM 246
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L +ITNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +L+S T+P V+
Sbjct: 247 LDS---RITNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLLWSATWPKEVQA 303
Query: 281 LAR 283
+AR
Sbjct: 304 IAR 306
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K + +A V ARGLD K++++V+N+D P EDYVH ++ A+ F +
Sbjct: 401 KNGTHPIMLATDVAARGLDVKDIKVVVNYDMPKTAEDYVHRIGRTGRAGATGTAYSFFTN 460
Query: 341 ENAIYATDLVKAFE 354
+A A +V +
Sbjct: 461 GDARLARQVVDVMQ 474
>gi|85682863|gb|ABC73407.1| CG10777 [Drosophila miranda]
Length = 346
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/261 (34%), Positives = 133/261 (50%), Gaps = 50/261 (19%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPK 118
++K ++ R ++K K + Q KNFY MS R++L++ + P
Sbjct: 91 REKAKNPGRNLVKPKWE-QLQPFPKNFYVIHPNTLNMSEQAVAELRRELEITVSGNDLPH 149
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P+ + + L +++ + P AIQ+ + +SG D V I +TGSGKTLA++LP
Sbjct: 150 PVANFEECSLPAHVIDEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLP 209
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR---------- 214
+ HI +QPP++ G + P+ LV+APT EL +Q ++R
Sbjct: 210 AIVHISKQPPILRG-EGPIALVLAPTRELAQQIQSVVRDYGHLCQPEIRHTCIFGGSSKV 268
Query: 215 -----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +I
Sbjct: 269 PQARDLERGVEVIIATPGRLIDFLENRN---TNLARCTYLVLDEADRMLDMGFEPQIRKI 325
Query: 258 VQNIRPDRQAVLFSPTFPPRV 278
++ IRPDRQ V++S T+P V
Sbjct: 326 IEQIRPDRQVVMWSATWPKEV 346
>gi|366999326|ref|XP_003684399.1| hypothetical protein TPHA_0B02930 [Tetrapisispora phaffii CBS 4417]
gi|357522695|emb|CCE61965.1| hypothetical protein TPHA_0B02930 [Tetrapisispora phaffii CBS 4417]
Length = 427
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + +++ +RK+ ++ I PKPI + + G +LE
Sbjct: 74 FEKNFYHEHESVSKRDDNEIREFRKENEMTITGHDIPKPITNFDEAGFPDYVLEEVKAEG 133
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P AIQ + +SG D + + TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 134 FDKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPIVLV 192
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
++PT EL QQ+R GR+ID+L
Sbjct: 193 LSPTRELAVQIQKECSKFGQSSRIRNTCVYGGVPRGQQIRDLIRGAEIVIATPGRLIDML 252
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 253 ---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQL 309
Query: 282 AR 283
AR
Sbjct: 310 AR 311
>gi|393216665|gb|EJD02155.1| RNA helicase [Fomitiporia mediterranea MF3/22]
Length = 416
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/251 (37%), Positives = 128/251 (50%), Gaps = 50/251 (19%)
Query: 78 IKIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
I +QQL KNFY + ++ S +R++ + + + PKPI ++ + G
Sbjct: 44 IDWGHQQLTKFEKNFYVEDERVSARSDRDVQEFRREKQVIVSGRNVPKPIFSFEEAGFPE 103
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
++ T +P IQ A + +SG D V I +TG GKT+AF LP + HI QP +
Sbjct: 104 YLMSTIRAQGFPSPTPIQCQAWPMALSGRDMVGIAQTGIGKTIAFALPAILHINAQPLLA 163
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ LV+APT EL Q Q+R
Sbjct: 164 PG-DGPIALVLAPTRELAVQIQQECAKFGSNSRIRNIAVYGGAPKGPQIRDLQRGVEIVI 222
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ ++FS
Sbjct: 223 ATPGRLIDMLESGK---TNLRRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLMFS 279
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 280 ATWPKDVQKLA 290
>gi|254578784|ref|XP_002495378.1| ZYRO0B09856p [Zygosaccharomyces rouxii]
gi|238938268|emb|CAR26445.1| ZYRO0B09856p [Zygosaccharomyces rouxii]
Length = 540
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 122/242 (50%), Gaps = 47/242 (19%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + S +RK+ ++ I PKPI ++ + G +L+
Sbjct: 70 FEKNFYVEHEGVRNRSDEDIAKFRKENEMTITGHDIPKPITSFDEAGFPDYVLKEVKAEG 129
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P IQ + +SG D V + TGSGKTL++ LP + HI QP + PG D PV LV
Sbjct: 130 FAAPTGIQCQGWPMALSGRDMVGVAATGSGKTLSYCLPAIVHINAQPLLAPG-DGPVVLV 188
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
+APT EL QQ+R GR+ID+L
Sbjct: 189 LAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPRGQQIRDLARGAEIVIATPGRLIDML 248
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
N TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 249 EINK---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQL 305
Query: 282 AR 283
AR
Sbjct: 306 AR 307
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARG+D K + VIN+D P + EDYVH ++ K A F +E N
Sbjct: 410 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGAKGTAISFFTEGNKGLG 469
Query: 347 TDLVKAFELSELVVRDDL 364
L+ ++ + DL
Sbjct: 470 ASLISIMREAKQEIPADL 487
>gi|242023199|ref|XP_002432023.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212517381|gb|EEB19285.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 755
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 129/257 (50%), Gaps = 54/257 (21%)
Query: 87 KNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHE 142
KNFY + + + YR+ +++ + K P P +T+ ++ ++ K
Sbjct: 105 KNFYIPHPNVLKRTDDEVNEYRELMEITVNGKNVPNPNQTFEESNFPANVMAVIKKQGFL 164
Query: 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMA 202
P AIQA + +SG D V I +TGSGKTLA+ LP HI Q P+ G D P+ LV+A
Sbjct: 165 KPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYALPATVHITNQKPLSKG-DGPIALVLA 223
Query: 203 PTGELVRQ---------------------------QVRR------------GRMIDLLCK 223
PT EL +Q Q R GR+ID L K
Sbjct: 224 PTRELAQQIQSVAKDFGASCSIRNTCIFGGAPKGSQARDLERGVEIVIATPGRLIDFLDK 283
Query: 224 NGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+ LA
Sbjct: 284 G---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQTLAE 340
Query: 284 -------KTNVCNLSIA 293
+ N+ +LS+A
Sbjct: 341 DFLHDYIQINIGSLSLA 357
>gi|156375512|ref|XP_001630124.1| predicted protein [Nematostella vectensis]
gi|156217139|gb|EDO38061.1| predicted protein [Nematostella vectensis]
Length = 446
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 126/244 (51%), Gaps = 49/244 (20%)
Query: 83 QQLRKNFY-----TQAREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFS 137
Q+ KNFY QAR + AYR+ DL + + PKP+ T+ ++ I F
Sbjct: 16 QKFEKNFYREHPVVQARGQHEVD-AYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFK 74
Query: 138 KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPV 197
+ P IQA + ++G + V I +TGSGKTL+F+LP + HI QP + PG D P+
Sbjct: 75 REGFTEPTMIQAQGWPVALTGRNLVGIAQTGSGKTLSFILPGIVHINHQPLLQPG-DGPI 133
Query: 198 GLVMAPTGELVRQ---------------------------QVRR------------GRMI 218
LV+ PT EL +Q Q+R GR+I
Sbjct: 134 VLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKGPQIRELERGVEICIATPGRLI 193
Query: 219 DLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRV 278
D+L + TNL R TYLVLDEADRM DMGFEPQI I+ IRPDRQ +++S T+P V
Sbjct: 194 DML---ESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEV 250
Query: 279 EILA 282
+ LA
Sbjct: 251 QGLA 254
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V +RGLD +++ VINFD PN EDYVH +S ++ F + NA A +
Sbjct: 360 VATDVASRGLDISDIKFVINFDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAKE 419
Query: 349 LVKAFELSELVVRDDLKAVAD 369
LV + ++ V L + D
Sbjct: 420 LVSVLQEAKQHVNPKLLNLQD 440
>gi|194763631|ref|XP_001963936.1| GF20995 [Drosophila ananassae]
gi|190618861|gb|EDV34385.1| GF20995 [Drosophila ananassae]
Length = 996
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 140/266 (52%), Gaps = 52/266 (19%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFY-----TQAREITRMSPAYRKQLDLKIREKCAP 117
++K ++ R ++K + + + K+FY T A+ +++ R++L++ + P
Sbjct: 184 REKAKNPGRNLVKP-VWSNLEPFNKDFYNIHPNTLAKTEQQVADM-RRELEITVSGNDLP 241
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
P+ + + L +++ + P AIQ+ + +SG D V I +TGSGKTLA++L
Sbjct: 242 HPVANFEECSLPAHVIDEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYML 301
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR--------- 214
P + HI QPP++ G + PV LV+APT EL +Q ++R
Sbjct: 302 PAIVHIGNQPPILRG-EGPVALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSK 360
Query: 215 ------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
GR+ID L + TNL R TYLVLDEADRM DMGFEPQI +
Sbjct: 361 VPQARDLERGVEVIIATPGRLIDFLEN---RNTNLQRCTYLVLDEADRMLDMGFEPQIRK 417
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILA 282
I++ IRPDRQ V++S T+P V+ LA
Sbjct: 418 IIEQIRPDRQVVMWSATWPKEVQALA 443
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 551 SNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 608
Query: 343 AIYATDLVKAFE 354
A A +L+ E
Sbjct: 609 AKQARELISVLE 620
>gi|410903051|ref|XP_003965007.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Takifugu
rubripes]
Length = 872
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 128/248 (51%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + E++ ++ R++L+L++ PKP ++ G +++
Sbjct: 200 EIDYPPFEKNFYNEHEELSSLNGTQVVELRQKLNLRVSGAAPPKPSTSFAHFGFDEQLMH 259
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + G +
Sbjct: 260 QIRKSEYTQPTPIQCQGVPIALSGRDMIGIAKTGSGKTAAFIWPMLVHIMDQKELEAG-E 318
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 319 GPIAVIVCPTRELCQQIHAECKRFGKAYSLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 378
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K T+L RVTYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 379 RLIDHVKK---KATSLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 435
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 436 KKIERLAR 443
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K N + +A V ARGLD + VIN+D D + + H ++ K A+ ++
Sbjct: 538 KKNNMPVLVATDVAARGLDIPSIRTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTN 597
Query: 341 ENAIYATDLVKAFELSELVVRDDLK--AVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
+++ +A DLV+ E + V +L A+ + + K G+ GG L +R
Sbjct: 598 KDSTFAGDLVRNLEGANQAVSKELMDLAMQNPWFRKSRFKAGKGKRLHIGGGGLGYKER 656
>gi|429329582|gb|AFZ81341.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 518
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 123/240 (51%), Gaps = 42/240 (17%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKC-APKPIKTWRQTGLTTKILETFSKL 139
KNFY++ E+ + RK+ ++ I PKP+ + T IL +
Sbjct: 62 FEKNFYSEHPEVAALGFRDVENIRKEKEITIISGANVPKPVTKFEYTSFPNYILRAIESV 121
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P IQ + +SG D + I ETGSGKTLAFLLP + HI Q + PGD P+ L
Sbjct: 122 GFQAPTPIQVQGWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQHLLRPGD-GPIVL 180
Query: 200 VMAPTGELVRQ------------------------------QVRRGRMIDLLCKNGV--- 226
V+APT ELV Q ++R+G I L C +
Sbjct: 181 VLAPTRELVEQIRQQCLQFGSSSKIKSSVAYGGVPKRPQIVELRKGVEILLACPGRLIDF 240
Query: 227 ---KITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
+TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ LAR
Sbjct: 241 LESDVTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMWSATWPKEVQSLAR 300
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYA 346
+ IA V +RGLD +++ VIN+D PN EDYVH ++ K ++ F++ + A
Sbjct: 402 IMIATDVASRGLDVHDVKYVINYDFPNQIEDYVHRIGRTGRAGTKGASYTFLTPDKNRIA 461
Query: 347 TDLVKAFELSELVVRDDLKAVA 368
DLV+ + V +L +A
Sbjct: 462 RDLVRVLREANQPVSPELSRLA 483
>gi|56784388|dbj|BAD82427.1| putative DEAD box RNA helicase [Oryza sativa Japonica Group]
gi|56785381|dbj|BAD82339.1| putative DEAD box RNA helicase [Oryza sativa Japonica Group]
gi|222619731|gb|EEE55863.1| hypothetical protein OsJ_04500 [Oryza sativa Japonica Group]
Length = 571
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 129/252 (51%), Gaps = 50/252 (19%)
Query: 79 KIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D++ L KNFY + + MS YR+Q D+ + PKP++ +++
Sbjct: 107 KPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDY 166
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
++ +K P IQ+ + + G D + I +TGSGKTL++LLP L H+ QP +
Sbjct: 167 CMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQ 226
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ L++APT EL Q Q+R
Sbjct: 227 G-DGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 285
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S
Sbjct: 286 TPGRLIDMLEGGH---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSA 342
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 343 TWPREVESLARQ 354
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VINFD P EDY+H ++ AF F +
Sbjct: 448 KSGKSPIMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTL 507
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVA 391
NA ++ +LVK + VV L+++A S ++G G G GG
Sbjct: 508 SNAKFSRNLVKILREAGQVVNPALESMAKS---ASSMGGGNFRSRGRGGFG 555
>gi|332025702|gb|EGI65860.1| ATP-dependent RNA helicase DDX42 [Acromyrmex echinatior]
Length = 752
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 126/248 (50%), Gaps = 63/248 (25%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y+ KNFY EI +S +K L +K+ P P+ ++ G +++
Sbjct: 208 EIEYESFEKNFYNVHEEIASLSKQQIDDLKKTLGIKVSGPSPPNPVTSFGHFGFDDALIK 267
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K +SG D + I +TGSGKT AF+ PML HI +Q + GD
Sbjct: 268 AIRK----------------NLSGRDIIGIAKTGSGKTAAFIWPMLVHIMDQRELKAGD- 310
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------G 215
P+GL++APT EL + Q+ ++ G
Sbjct: 311 GPIGLILAPTRELSQQIYQEAKKFGKVYNIQVCCCYGGGSKWEQSKALESGAEIVVATPG 370
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
RMIDL+ +K TNLTRVT+LVLDEADRMFDMGFEPQ+ I ++RPDRQ +LFS TF
Sbjct: 371 RMIDLVK---MKATNLTRVTFLVLDEADRMFDMGFEPQVRSICNHVRPDRQTLLFSATFK 427
Query: 276 PRVEILAR 283
+VE LAR
Sbjct: 428 KKVEKLAR 435
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 5/123 (4%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I A K + +A V ARGLD ++ V+N+D D + + H ++ K A+
Sbjct: 527 ITAFKKKEVSTLVATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKGTAYT 586
Query: 337 FISEENAIYATDLVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNL 394
++E++ +A LV+ E + V L A+ S+ K G+ GG L
Sbjct: 587 LVTEKDKEFAGHLVRNLEGANQEVPKSLIDLAMQSSWFRKSRFKGGKGKSLNVGGAGLGF 646
Query: 395 MKR 397
R
Sbjct: 647 RGR 649
>gi|212543663|ref|XP_002151986.1| RNA helicase (Dbp), putative [Talaromyces marneffei ATCC 18224]
gi|210066893|gb|EEA20986.1| RNA helicase (Dbp), putative [Talaromyces marneffei ATCC 18224]
Length = 554
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T S A+RK+ + + + P+P++++ + G +L
Sbjct: 84 KFEKSFYKEHEDVTNRSQKDVDAFRKEHQMAVTGRNVPRPVESFDEAGFPNYVLSEVKAQ 143
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 144 GFAKPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLSPG-DGPIVL 202
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 203 ILAPTRELAVQIQTEISKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 262
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 263 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 319
Query: 281 LA 282
LA
Sbjct: 320 LA 321
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYA 346
+ +A V +RG+D +++ VIN+D PN+ EDYVH ++ K A F + +N+ A
Sbjct: 425 IMVATDVASRGIDVRDITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQA 484
Query: 347 TDLV 350
DLV
Sbjct: 485 RDLV 488
>gi|414879081|tpg|DAA56212.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 473
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 130/252 (51%), Gaps = 50/252 (19%)
Query: 79 KIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D++ L KNFY + + MS A YR+ D+ I + PKP++ +++
Sbjct: 104 KPDFRSLIPFEKNFYVECPSVQAMSEADVAQYRRLRDITIEGRDVPKPVRYFQEANFPDY 163
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
++ +K P IQ+ + + G D + I +TGSGKTL++LLP L H+ QP +
Sbjct: 164 CMQAIAKSGFVEPTPIQSQGWPMALKGRDLIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQ 223
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ L++APT EL Q Q+R
Sbjct: 224 G-DGPIVLILAPTRELAVQIQEESTKFGSYSRTRSTCVYGGAPKGPQIRDLRRGVEIVIA 282
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S
Sbjct: 283 TPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSA 339
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 340 TWPREVEALARQ 351
>gi|91092124|ref|XP_972501.1| PREDICTED: similar to DEAD-box RNA-dependent helicase p68
[Tribolium castaneum]
Length = 540
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 49/242 (20%)
Query: 85 LRKNFYTQAREITRMSPAY-----RKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+K+FY +T P+Y R++ ++ ++ KC P + T+ + G ++ K+
Sbjct: 51 FKKDFYVPHPNVTN-RPSYEVEEWRREKEITLKGKCIPDLVFTFEEAGFPDYVMSEIRKM 109
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
++P IQ+ + +SG D V I TGSGKTL+++LP + HI QP ++ G D P+ L
Sbjct: 110 GFKHPTPIQSQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINHQPRLLRG-DGPIAL 168
Query: 200 VMAPTGELVRQ------------QVRR---------------------------GRMIDL 220
V+APT EL +Q ++R GR+ID
Sbjct: 169 VLAPTRELAQQIQQVATDFGRSSKIRNTCVFGGAPKGPQANDLMDGVEIVIATPGRLIDF 228
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+
Sbjct: 229 LESNR---TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVQA 285
Query: 281 LA 282
LA
Sbjct: 286 LA 287
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 69/135 (51%), Gaps = 8/135 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V ARGLD ++++ VINFD P++ EDYVH +S A+ F +
Sbjct: 385 RTGKAPILVATDVAARGLDVEDVKFVINFDYPSNSEDYVHRIGRTGRSQRTGTAYTFFTP 444
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVAD--SFIAKVNLGLGQVHGTGHGGVA---LNLM 395
NA A DLV + ++ V+ L+ +AD ++ + + G G G G +A +
Sbjct: 445 ANANKAADLVSVLKEAKQVINPKLQEMADNRNWSSNGSSGRGLSPAPGRGLLAEEDATEV 504
Query: 396 KRRIRRGKQLRKAQA 410
R G++ R AQA
Sbjct: 505 DRETEIGERSRVAQA 519
>gi|357620336|gb|EHJ72566.1| DEAD box polypeptide 5 [Danaus plexippus]
Length = 592
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 123/243 (50%), Gaps = 47/243 (19%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q K+FY + SP YR + ++ + P PI+ + + ++++ S
Sbjct: 113 QPFNKDFYNPPPSVLNRSPYEVEEYRNKHEVSVSGADVPNPIQHFEEGNFPDYVMKSISS 172
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ + P IQA + +SG + V I +TGSGKTLA++LP + HI Q PV G D PV
Sbjct: 173 MGYNEPTPIQAQGWPIAMSGKNLVGIAQTGSGKTLAYILPAIVHINNQQPVRRG-DGPVA 231
Query: 199 LVMAPTGELV---------------------------RQQVRR------------GRMID 219
LV+APT EL R+Q R GR+ID
Sbjct: 232 LVLAPTRELAQQIQQVATDFGNAAYVRNTCVFGGAPKREQARDLERGVEIVIATPGRLID 291
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 292 FLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVR 348
Query: 280 ILA 282
LA
Sbjct: 349 KLA 351
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K N+ +A V ARGLD ++ VINFD PN EDY+H +S K ++ F +
Sbjct: 451 KQGRANILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTP 510
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVAD 369
N+ A DLV + + VV L+ +AD
Sbjct: 511 SNSRQAKDLVSVLQEANQVVSPQLQTMAD 539
>gi|358365783|dbj|GAA82405.1| RNA helicase Dbp [Aspergillus kawachii IFO 4308]
Length = 558
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S +RK+ ++ ++ + P+P++T+ + G +L
Sbjct: 93 KFEKSFYKEHADVAERSQRDVDEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQ 152
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 153 GFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 211
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 212 ILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 271
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 272 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQ 328
Query: 281 LA 282
LA
Sbjct: 329 LA 330
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A F +
Sbjct: 428 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTT 487
Query: 341 ENAIYATDLV 350
+N+ A DLV
Sbjct: 488 DNSKQARDLV 497
>gi|440467823|gb|ELQ37019.1| phosphomethylpyrimidine kinase [Magnaporthe oryzae Y34]
gi|440484756|gb|ELQ64783.1| phosphomethylpyrimidine kinase [Magnaporthe oryzae P131]
Length = 1039
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T S A +R++ + ++ PKP++T+ + G +++
Sbjct: 552 KFEKHFYKEHPDVTNRSQAEVDKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQ 611
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 612 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 670
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 671 ILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 730
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 731 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRN 787
Query: 281 LA 282
+A
Sbjct: 788 MA 789
>gi|226289750|gb|EEH45234.1| ATP-dependent RNA helicase DBP2 [Paracoccidioides brasiliensis
Pb18]
Length = 482
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 126/243 (51%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S ++R+Q ++ ++ K P+P++T+ + G ++
Sbjct: 88 KFEKSFYKEHPDVAARSSQEVDSFRRQHEITVQGKNVPRPVETFDEAGFPQYVMTEVKAQ 147
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 148 GFSRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 206
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 207 VLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPKGPQIRDLTRGVEVCIATPGRLIDM 266
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++S T+P V
Sbjct: 267 L---EAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKDVRQ 323
Query: 281 LAR 283
LA+
Sbjct: 324 LAQ 326
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH 323
KT + +A V +RG+D +++ V+N+D PN+ EDYVH
Sbjct: 423 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVH 462
>gi|241118310|ref|XP_002402175.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215493275|gb|EEC02916.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 332
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 123/240 (51%), Gaps = 42/240 (17%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKC-APKPIKTWRQTGLTTKILETFSKL 139
KNFY++ E+ + RK+ ++ I PKP+ + T IL +
Sbjct: 59 FEKNFYSEHPEVAALGFRDVENIRKEKEITIISGANVPKPVTKFEYTSFPNYILRAIESV 118
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P IQ + +SG D + I ETGSGKTLAFLLP + HI Q + PGD P+ L
Sbjct: 119 GFQAPTPIQVQGWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQHLLRPGD-GPIVL 177
Query: 200 VMAPTGELVRQ------------------------------QVRRGRMIDLLCKNGV--- 226
V+APT ELV Q ++R+G I L C +
Sbjct: 178 VLAPTRELVEQIRQQCLQFGSSSKIKSSVAYGGVPKRPQIVELRKGVEILLACPGRLIDF 237
Query: 227 ---KITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
+TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ LAR
Sbjct: 238 LESDVTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMWSATWPKEVQSLAR 297
>gi|20072320|gb|AAH26492.1| Ddx46 protein [Mus musculus]
Length = 626
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 100/168 (59%), Gaps = 40/168 (23%)
Query: 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----- 210
+SG D + I +TGSGKT+AFLLPM RHI +Q + G+ P+ ++M PT EL Q
Sbjct: 1 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGE-GPIAVIMTPTRELALQITKEC 59
Query: 211 -------------------------QVRRG---------RMIDLLCKNGVKITNLTRVTY 236
+++RG RMID+L N ++TNL RVTY
Sbjct: 60 KKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTY 119
Query: 237 LVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+VLDEADRMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 120 VVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 167
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 260 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 319
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 320 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 350
>gi|317026711|ref|XP_001399394.2| ATP-dependent RNA helicase dbp2 [Aspergillus niger CBS 513.88]
Length = 564
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S +RK+ ++ ++ + P+P++T+ + G +L
Sbjct: 96 KFEKSFYKEHADVAERSQRDVDEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQ 155
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 156 GFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 214
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 215 ILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 274
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 275 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQ 331
Query: 281 LA 282
LA
Sbjct: 332 LA 333
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A F +
Sbjct: 431 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTT 490
Query: 341 ENAIYATDLV 350
+N+ A DLV
Sbjct: 491 DNSKQARDLV 500
>gi|296412374|ref|XP_002835899.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629696|emb|CAZ80056.1| unnamed protein product [Tuber melanosporum]
Length = 547
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY +A + +PA +R + ++++ + PKP+ + + G + ++
Sbjct: 85 KFEKSFYKEAPTVASRTPAEIEAFRLEKQMRVQGRDVPKPVVDFDEAGFPSYVMNEVKAQ 144
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 145 GFAAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 203
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q QVR GR+ID+
Sbjct: 204 VLAPTRELAVQIQQEVAKFGKSSRIRNTCVYGGVPKGPQVRDLSRGVEVLIATPGRLIDM 263
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 264 LETNK---TNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRQ 320
Query: 281 LA 282
LA
Sbjct: 321 LA 322
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH 323
KT + +A V +RG+D + + VINFD PN+ EDYVH
Sbjct: 420 KTGKSPIMVATDVASRGIDVRNITHVINFDYPNNSEDYVH 459
>gi|242059637|ref|XP_002458964.1| hypothetical protein SORBIDRAFT_03g043450 [Sorghum bicolor]
gi|241930939|gb|EES04084.1| hypothetical protein SORBIDRAFT_03g043450 [Sorghum bicolor]
Length = 578
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 130/252 (51%), Gaps = 50/252 (19%)
Query: 79 KIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D++ L KNFY + + MS A YR+ D+ + + PKP++ +++
Sbjct: 110 KPDFRSLIPFEKNFYVECPSVQAMSEADVAQYRRLRDITVEGRDVPKPVRYFQEANFPDY 169
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
++ +K P IQ+ + + G D + I +TGSGKTL++LLP L H+ QP +
Sbjct: 170 CMQAIAKSGFVEPTPIQSQGWPMALKGRDLIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQ 229
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ L++APT EL Q Q+R
Sbjct: 230 G-DGPIVLILAPTRELAVQIQEESTKFGSYSRTRSTCVYGGAPKGPQIRDLRRGVEIVIA 288
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S
Sbjct: 289 TPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSA 345
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 346 TWPREVEALARQ 357
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDY+H ++ AF F +
Sbjct: 451 KSGKSPIMAATDVAARGLDVKDIKCVINYDFPTTLEDYIHRIGRTGRAGASGTAFTFFTH 510
Query: 341 ENAIYATDLVK 351
NA ++ +LVK
Sbjct: 511 ANAKFSRNLVK 521
>gi|406607618|emb|CCH41089.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 568
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 139/280 (49%), Gaps = 58/280 (20%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + + S A+R ++ + PKPI+ + + G + +L+
Sbjct: 103 RFEKNFYKEHEVVRNRSEEAVQAFRNSHEMTVIGTNIPKPIEEFDEAGFPSYVLDEVKAQ 162
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ + +SG D + + TGSGKTL++ LP + HI QPP+ GD P+ L
Sbjct: 163 GFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYALPGILHINAQPPLSHGD-GPIVL 221
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
++APT EL QQ+R GR+ID+
Sbjct: 222 ILAPTRELAVQIQTECSKFGHTSRIRNTCVYGGVPKGQQIRDLARGSEICIATPGRLIDM 281
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V+
Sbjct: 282 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIDQIRPDRQTLMWSATWPKEVQT 338
Query: 281 LAR-------KTNVCNLSIANSVRARGLDEKELELVINFD 313
LAR + NV +L +A S + L +E+V +F+
Sbjct: 339 LARDYLHDYIQVNVGSLELAASHTIKQL----VEVVSDFE 374
>gi|358397215|gb|EHK46590.1| hypothetical protein TRIATDRAFT_291734 [Trichoderma atroviride IMI
206040]
Length = 549
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 136/264 (51%), Gaps = 54/264 (20%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY +A E+ A +R++ + I PKP++T+ + G +++
Sbjct: 100 KFEKDFYKEAPEVAARDAAEVEAFRRKHQMTIAGSDVPKPVETFDEAGFPRYVMDEVKAQ 159
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 160 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLSPG-DGPIVL 218
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 219 ILAPTRELAVQIQQEISKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 278
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 279 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRA 335
Query: 281 LAR-------KTNVCNLSIANSVR 297
LA + N+ ++ +A + R
Sbjct: 336 LASDFLQDFIQVNIGSMELAANHR 359
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ A +
Sbjct: 435 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGQNGTAITLFTT 494
Query: 341 ENAIYATDLVKAFE 354
+N A DLV +
Sbjct: 495 DNQKQARDLVNVLQ 508
>gi|126134271|ref|XP_001383660.1| DEAD box RNA helicase [Scheffersomyces stipitis CBS 6054]
gi|146286100|sp|A3LQW7.1|DBP2_PICST RecName: Full=ATP-dependent RNA helicase DBP2
gi|126095809|gb|ABN65631.1| DEAD box RNA helicase [Scheffersomyces stipitis CBS 6054]
Length = 530
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 123/243 (50%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFYT+ ++ S A+R + + P PI T+ + G +L
Sbjct: 56 KFEKNFYTEHPDVAARSDKDIAAFRNEHQMSCLGSDIPHPITTFDEAGFPEYVLNEVKAQ 115
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+P AIQ + +SG D V I TGSGKTL++ LP + HI QP + PG D PV L
Sbjct: 116 GFPSPTAIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPAIVHINAQPLLSPG-DGPVVL 174
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR+ID+
Sbjct: 175 VLAPTRELAVQIQQECSKFGSSSRIRNTCVYGGAPKGQQIRDLARGVEIVIATPGRLIDM 234
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 235 L---EMGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQN 291
Query: 281 LAR 283
LAR
Sbjct: 292 LAR 294
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH 323
KT + +A V ARG+D K + VINFD P + EDYVH
Sbjct: 391 KTGKSPIMVATDVAARGIDVKGINFVINFDMPGNIEDYVH 430
>gi|207341737|gb|EDZ69711.1| YNL112Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|392296879|gb|EIW07980.1| Dbp2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 434
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 122/241 (50%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + S + +RK+ ++ I PKPI T+ + G +L
Sbjct: 73 FEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 133 FDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPG-DGPIVLV 191
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
+APT EL QQ+R GR+ID+L
Sbjct: 192 LAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDML 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 252 ---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQL 308
Query: 282 A 282
A
Sbjct: 309 A 309
>gi|134034065|sp|A2QC74.1|DBP2_ASPNC RecName: Full=ATP-dependent RNA helicase dbp2
gi|134056301|emb|CAK37534.1| unnamed protein product [Aspergillus niger]
Length = 565
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S +RK+ ++ ++ + P+P++T+ + G +L
Sbjct: 96 KFEKSFYKEHADVAERSQRDVDEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQ 155
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 156 GFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 214
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 215 ILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 274
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 275 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQ 331
Query: 281 LA 282
LA
Sbjct: 332 LA 333
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A F +
Sbjct: 431 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTT 490
Query: 341 ENAIYATDLV 350
+N+ A DLV
Sbjct: 491 DNSKQARDLV 500
>gi|350634363|gb|EHA22725.1| ATP-dependent RNA helicase of the DEAD-box protein family
[Aspergillus niger ATCC 1015]
Length = 547
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S +RK+ ++ ++ + P+P++T+ + G +L
Sbjct: 88 KFEKSFYKEHADVAERSQRDVDEFRKKHEMAVQGRNVPRPVETFDEAGFPQYVLSEVKAQ 147
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 148 GFDRPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 206
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 207 ILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 266
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 267 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQ 323
Query: 281 LA 282
LA
Sbjct: 324 LA 325
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A F +
Sbjct: 423 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTT 482
Query: 341 ENAIYATDLV 350
+N+ A DLV
Sbjct: 483 DNSKQARDLV 492
>gi|389630386|ref|XP_003712846.1| ATP-dependent RNA helicase DBP2 [Magnaporthe oryzae 70-15]
gi|152013478|sp|A4QSS5.1|DBP2_MAGO7 RecName: Full=ATP-dependent RNA helicase DBP2
gi|351645178|gb|EHA53039.1| ATP-dependent RNA helicase DBP2 [Magnaporthe oryzae 70-15]
Length = 548
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T S A +R++ + ++ PKP++T+ + G +++
Sbjct: 84 KFEKHFYKEHPDVTNRSQAEVDKFRREHSMAVQGSDVPKPVETFDEAGFPRYVMDEVKAQ 143
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 144 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 202
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 203 ILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 262
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 263 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRN 319
Query: 281 LA 282
+A
Sbjct: 320 MA 321
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 421 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 480
Query: 341 ENAIYATDLVKAFE 354
EN+ A DL+ +
Sbjct: 481 ENSKQARDLLGVLQ 494
>gi|91206537|sp|Q4X195.2|DBP2_ASPFU RecName: Full=ATP-dependent RNA helicase dbp2
Length = 547
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ R +RK+ ++ ++ + P+P++ + + G +L
Sbjct: 80 KFEKSFYKEHPDVAARSEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQ 139
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 140 GFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 198
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 199 ILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 258
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++S T+P V
Sbjct: 259 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKEVRQ 315
Query: 281 LA 282
LA
Sbjct: 316 LA 317
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDY+H ++ K A F +
Sbjct: 415 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 474
Query: 341 ENAIYATDLV 350
EN+ A DLV
Sbjct: 475 ENSKQARDLV 484
>gi|8444|emb|CAA37037.1| unnamed protein product [Drosophila melanogaster]
Length = 575
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR++ ++ +R + P PI+ + + L +
Sbjct: 90 VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEVHLPDYV 148
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 149 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 208
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 209 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 267
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 268 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 324
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 325 WPKEVKQLA 333
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 433 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 492
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 493 NNAKQAKALV 502
>gi|414879080|tpg|DAA56211.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 397
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 130/252 (51%), Gaps = 50/252 (19%)
Query: 79 KIDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D++ L KNFY + + MS A YR+ D+ I + PKP++ +++
Sbjct: 104 KPDFRSLIPFEKNFYVECPSVQAMSEADVAQYRRLRDITIEGRDVPKPVRYFQEANFPDY 163
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
++ +K P IQ+ + + G D + I +TGSGKTL++LLP L H+ QP +
Sbjct: 164 CMQAIAKSGFVEPTPIQSQGWPMALKGRDLIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQ 223
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ L++APT EL Q Q+R
Sbjct: 224 G-DGPIVLILAPTRELAVQIQEESTKFGSYSRTRSTCVYGGAPKGPQIRDLRRGVEIVIA 282
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S
Sbjct: 283 TPGRLIDMLEAGH---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSA 339
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 340 TWPREVEALARQ 351
>gi|448097299|ref|XP_004198636.1| Piso0_002019 [Millerozyma farinosa CBS 7064]
gi|359380058|emb|CCE82299.1| Piso0_002019 [Millerozyma farinosa CBS 7064]
Length = 534
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 124/243 (51%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + +T A+RK+ ++ PKPI T+ + +L K
Sbjct: 60 RFEKNFYQEDPNVTARPDEEVGAFRKENQMQCTGSDIPKPITTFDEASFPDYVLTEVKKQ 119
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+P AIQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ L
Sbjct: 120 GFPSPTAIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPIVL 178
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 179 VLAPTRELAVQIQQECSKFGRTSRIRNTCIYGGAPKGPQIRDLARGVEICIATPGRLIDM 238
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L N TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 239 LEMNK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQN 295
Query: 281 LAR 283
LAR
Sbjct: 296 LAR 298
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V ARG+D K + VIN D P + EDYVH ++ A F +E
Sbjct: 395 KTGKSPIMVATDVAARGIDVKGISYVINLDMPGNIEDYVHRIGRTGRAGTTGTAVSFFTE 454
Query: 341 ENAIYATDLVK 351
N+ DL K
Sbjct: 455 ANSKLGGDLCK 465
>gi|71001454|ref|XP_755408.1| RNA helicase (Dbp) [Aspergillus fumigatus Af293]
gi|66853046|gb|EAL93370.1| RNA helicase (Dbp), putative [Aspergillus fumigatus Af293]
gi|159129480|gb|EDP54594.1| RNA helicase (Dbp), putative [Aspergillus fumigatus A1163]
Length = 565
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ R +RK+ ++ ++ + P+P++ + + G +L
Sbjct: 80 KFEKSFYKEHPDVAARSEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQ 139
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 140 GFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 198
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 199 ILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 258
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++S T+P V
Sbjct: 259 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKEVRQ 315
Query: 281 LA 282
LA
Sbjct: 316 LA 317
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 302 DEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATDLV 350
D +++ V+N+D PN+ EDY+H ++ K A F + EN+ A DLV
Sbjct: 451 DVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLV 502
>gi|395538171|ref|XP_003771058.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Sarcophilus
harrisii]
Length = 699
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 99 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 158
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
N P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 159 QNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 217
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 218 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 277
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 278 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 334
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 335 QLAEDFLRDYTQINVGNLELS 355
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 443 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 502
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 503 LIKVLEEANQAINPKLMQLVD 523
>gi|24644481|ref|NP_731031.1| Rm62, isoform D [Drosophila melanogaster]
gi|281361218|ref|NP_001163528.1| Rm62, isoform H [Drosophila melanogaster]
gi|23175946|gb|AAN14331.1| Rm62, isoform D [Drosophila melanogaster]
gi|51092049|gb|AAT94438.1| RE56857p [Drosophila melanogaster]
gi|272476832|gb|ACZ94826.1| Rm62, isoform H [Drosophila melanogaster]
Length = 575
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR++ ++ +R + P PI+ + + L +
Sbjct: 90 VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEVHLPDYV 148
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 149 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 208
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 209 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 267
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 268 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 324
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 325 WPKEVKQLA 333
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 433 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 492
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 493 NNAKQAKALV 502
>gi|195131547|ref|XP_002010212.1| GI14822 [Drosophila mojavensis]
gi|193908662|gb|EDW07529.1| GI14822 [Drosophila mojavensis]
Length = 963
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 137/269 (50%), Gaps = 52/269 (19%)
Query: 59 MKRAKKKKRDKNREIIKSKIKIDYQQLRKNFY-TQAREITRMSPA---YRKQLDLKIREK 114
++R K K +N E + + +Q K+FY + R A R +L++ +
Sbjct: 173 LQREKAKNPGRNLEKPQWENLAPFQ---KDFYIMHPNTMNRSEQAVAEMRHELEITVSGN 229
Query: 115 CAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLA 174
P P+ + ++ L I++ + P AIQA + +SG D V I +TGSGKTLA
Sbjct: 230 ELPHPVANFEESSLPPHIIDEMKRQGFTKPTAIQAQGWPIALSGRDLVGIAQTGSGKTLA 289
Query: 175 FLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------QVRR------ 214
++LP + HI QPP++ G + P+ LV+APT EL +Q ++R
Sbjct: 290 YMLPAIVHISNQPPLMRG-EGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGG 348
Query: 215 ---------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQ 253
GR+ID L + TNL R TYLVLDEADRM DMGFEPQ
Sbjct: 349 SSKVPQARDLERGVEVIIATPGRLIDFLEN---RNTNLQRCTYLVLDEADRMLDMGFEPQ 405
Query: 254 ITRIVQNIRPDRQAVLFSPTFPPRVEILA 282
I +I++ IRPDRQ V++S T+P V+ LA
Sbjct: 406 IRKIIEQIRPDRQVVMWSATWPKEVQALA 434
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEEN 342
N+ IA V +RGLD ++L+ VIN+D PN E+YVH CQ A+ F + +N
Sbjct: 540 SNILIATDVASRGLDVEDLQYVINYDYPNSSENYVHRIGRTGRCQQL--GTAYTFFTPDN 597
Query: 343 AIYATDLVKAFE 354
A A +L+ E
Sbjct: 598 AKQARELISVLE 609
>gi|383852806|ref|XP_003701916.1| PREDICTED: probable ATP-dependent RNA helicase DDX5-like [Megachile
rotundata]
Length = 615
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 124/245 (50%), Gaps = 47/245 (19%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q RK+FY +T S AYR ++ ++ P P + + G +L +
Sbjct: 71 QPFRKDFYEPHPNVTTRSTHVVEAYRSDKEITVKGTNIPSPNIFFEEGGFPEYVLNEIRR 130
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P AIQA + +SG D V I +TGSGKTLA++LP + HI +QP + GD P+
Sbjct: 131 QGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINQQPRLNRGD-GPIA 189
Query: 199 LVMAPTGELVRQ------------QVRR---------------------------GRMID 219
L++APT EL +Q QVR GR+ID
Sbjct: 190 LILAPTRELAQQIQQVASDFGVSSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRLID 249
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L + TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V
Sbjct: 250 FLERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVR 306
Query: 280 ILARK 284
LA +
Sbjct: 307 NLAEE 311
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN D P++ EDYVH +S A+ F + NA A+D
Sbjct: 415 VATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKASD 474
Query: 349 LVKAFELSELVVRDDLKAVA 368
L++ E ++ VV L ++
Sbjct: 475 LIQVLEEAKQVVNPKLYELS 494
>gi|56784389|dbj|BAD82428.1| putative DEAD box RNA helicase [Oryza sativa Japonica Group]
gi|56785382|dbj|BAD82340.1| putative DEAD box RNA helicase [Oryza sativa Japonica Group]
Length = 477
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 129/252 (51%), Gaps = 50/252 (19%)
Query: 79 KIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D++ L KNFY + + MS YR+Q D+ + PKP++ +++
Sbjct: 107 KPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDY 166
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
++ +K P IQ+ + + G D + I +TGSGKTL++LLP L H+ QP +
Sbjct: 167 CMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQ 226
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ L++APT EL Q Q+R
Sbjct: 227 G-DGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 285
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S
Sbjct: 286 TPGRLIDMLEGGH---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSA 342
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 343 TWPREVESLARQ 354
>gi|24644483|ref|NP_731032.1| Rm62, isoform E [Drosophila melanogaster]
gi|320542448|ref|NP_001189182.1| Rm62, isoform I [Drosophila melanogaster]
gi|10727150|gb|AAF51927.2| Rm62, isoform E [Drosophila melanogaster]
gi|257286223|gb|ACV53058.1| LP18603p [Drosophila melanogaster]
gi|318068719|gb|ADV37273.1| Rm62, isoform I [Drosophila melanogaster]
Length = 578
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR++ ++ +R + P PI+ + + L +
Sbjct: 93 VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEVHLPDYV 151
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 152 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 211
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 212 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 270
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 271 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 327
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 328 WPKEVKQLA 336
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 436 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 495
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 496 NNAKQAKALV 505
>gi|126339554|ref|XP_001367967.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like
[Monodelphis domestica]
Length = 772
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 172 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 231
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
N P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 232 QNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 290
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 291 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 350
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 351 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 407
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 408 QLAEDFLRDYTQINVGNLELS 428
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 516 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 575
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 576 LIKVLEEANQAINPKLMQLVD 596
>gi|366995463|ref|XP_003677495.1| hypothetical protein NCAS_0G02560 [Naumovozyma castellii CBS 4309]
gi|342303364|emb|CCC71143.1| hypothetical protein NCAS_0G02560 [Naumovozyma castellii CBS 4309]
Length = 556
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 122/241 (50%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + + A +RK+ ++ I PKPI T+ + G +L
Sbjct: 75 FEKNFYVEHETVQNRTEAEIAQFRKENEMTISGHDIPKPITTFDEAGFPDYVLNEVKAEG 134
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQ + +SG D + + TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 135 FDKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLAPG-DGPIVLV 193
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
+APT EL QQ+R GR+ID+L
Sbjct: 194 LAPTRELAVQIQKECSKFGHSSRIRNTCVYGGVPRGQQIRDLSRGSEIVIATPGRLIDML 253
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 254 E---IGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQL 310
Query: 282 A 282
A
Sbjct: 311 A 311
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARG+D K + VIN+D P + EDYVH ++ A F +E N
Sbjct: 415 IMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEGNKSLG 474
Query: 347 TDLVKAFELSELVVRDDL 364
L+ ++ + +DL
Sbjct: 475 APLISIMREAKQNIPEDL 492
>gi|24644485|ref|NP_731033.1| Rm62, isoform C [Drosophila melanogaster]
gi|24644487|ref|NP_731034.1| Rm62, isoform F [Drosophila melanogaster]
gi|45551833|ref|NP_731035.2| Rm62, isoform B [Drosophila melanogaster]
gi|10727151|gb|AAG22212.1| Rm62, isoform F [Drosophila melanogaster]
gi|23175947|gb|AAN14332.1| Rm62, isoform C [Drosophila melanogaster]
gi|25012758|gb|AAN71471.1| RE68337p [Drosophila melanogaster]
gi|45446365|gb|AAF51926.2| Rm62, isoform B [Drosophila melanogaster]
gi|220950572|gb|ACL87829.1| Rm62-PB [synthetic construct]
Length = 578
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR++ ++ +R + P PI+ + + L +
Sbjct: 93 VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEVHLPDYV 151
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 152 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 211
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 212 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 270
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 271 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 327
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 328 WPKEVKQLA 336
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 436 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 495
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 496 NNAKQAKALV 505
>gi|307173398|gb|EFN64357.1| Probable ATP-dependent RNA helicase DDX5 [Camponotus floridanus]
Length = 639
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 131/255 (51%), Gaps = 49/255 (19%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
LRK+FY + + S +R+ ++ ++ + P PI+ + + ++E +
Sbjct: 98 LRKDFYIEHPAVRNRSNEEVSQFRENAEITVKGENVPNPIQYFEEGNFPPYVMEGIRRQG 157
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQA + +SG D VAI +TGSGKTL ++LP + HI QP + G D P+ LV
Sbjct: 158 YSQPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQPRLSNG-DGPIVLV 216
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q VR GR+ID L
Sbjct: 217 LAPTRELAQQIQEVANCFGETAAVRNTCIFGGAPKGPQAHDLERGIEICIATPGRLIDFL 276
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 277 ERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRAL 333
Query: 282 ARK--TNVCNLSIAN 294
A T+ +L+I +
Sbjct: 334 AEDFLTDYVHLNIGS 348
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD +++ VINFD P+ EDY+H ++ + A+ F + N +A D
Sbjct: 440 VATDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGD 499
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L++ + V L +A+
Sbjct: 500 LIEVLREAGQNVNPRLSEMAE 520
>gi|354544992|emb|CCE41717.1| hypothetical protein CPAR2_802670 [Candida parapsilosis]
Length = 562
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/243 (38%), Positives = 122/243 (50%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFYT+ + S A+R + ++ ++ P PI + + G +L
Sbjct: 84 KFEKNFYTEHPNVAARSDADIEAFRAENEMSVQGHDIPHPITNFDEAGFPDYVLSELKAQ 143
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ + +SG D V I TGSGKTL++ LP + HI QP + PGD P+ L
Sbjct: 144 GFPKPTAIQCQGWPMALSGRDMVGIAATGSGKTLSYALPGIVHINAQPLLKPGD-GPIVL 202
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q QVR GR+ID+
Sbjct: 203 VLAPTRELACQIQTECSKFGSSSRIRNTCVYGGAPKGPQVRDLARGVEICIATPGRLIDM 262
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 263 LEAGK---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQA 319
Query: 281 LAR 283
LAR
Sbjct: 320 LAR 322
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC---CQSWLKSCAFRFISEENAIY 345
++ +A V ARG+D K + VINFD P + EDYVH + A F ++ N
Sbjct: 424 SIMVATDVAARGIDVKGITHVINFDMPGNIEDYVHRIGRTGRGGATGMAISFFTDNNKKL 483
Query: 346 ATDLVK 351
DL K
Sbjct: 484 GGDLCK 489
>gi|195125432|ref|XP_002007182.1| GI12524 [Drosophila mojavensis]
gi|193918791|gb|EDW17658.1| GI12524 [Drosophila mojavensis]
Length = 602
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/345 (32%), Positives = 162/345 (46%), Gaps = 65/345 (18%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q +KNFY + + SP AYR Q + +R AP PI+++ +T + +
Sbjct: 68 QPFQKNFYQEHPKTRNRSPEEVAAYRSQHQITVR-GMAPNPIRSFDETCFPDYCMNEIRR 126
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQA A +++SG + V I +TGSGKTLAF+LP + HI QP + G D P+
Sbjct: 127 QRYIEPTPIQAQAWPIVLSGNNLVGIAKTGSGKTLAFILPAIVHINGQPTLKRG-DGPIA 185
Query: 199 LVMAPTGELVRQ------------QVRR---------------------------GRMID 219
LV+APT EL +Q VR GR++D
Sbjct: 186 LVVAPTRELAQQIQTVANDFGSSSYVRNTCIFGGAPRSKQASDLQNGVEIVIATPGRLLD 245
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L TNL R TYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 246 FLQSG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKILSQIRPDRQILMWSATWPKEVR 302
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSCAFRFIS 339
LA + N ++ ++ LEL N ++ YV C + S +S
Sbjct: 303 QLAEDF------LGNYIQ---INIGSLELSAN----HNIRQYVDVCAEHEKGSKLKDLLS 349
Query: 340 EENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHG 384
IY + + + + + +A FI +G+G +HG
Sbjct: 350 H---IYDQSGMPGKIIIFVATKKKVDELA-RFINAFGVGVGSIHG 390
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P EDY+H ++ K ++ F +
Sbjct: 405 RSGRANILVATDVAARGLDVDGIKYVINFDFPQSSEDYIHRIGRTGRKHSTGTSYAFFTR 464
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+NA A L++ + + +L+ +A
Sbjct: 465 KNAKCARALIEILREANQNINPELEHIA 492
>gi|221059537|ref|XP_002260414.1| helicase [Plasmodium knowlesi strain H]
gi|193810487|emb|CAQ41681.1| helicase, putative [Plasmodium knowlesi strain H]
Length = 528
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 136/258 (52%), Gaps = 53/258 (20%)
Query: 75 KSKIKIDYQQLR-----KNFYTQAREITRMSPAYRKQLDLKIR-----EKCAPKPIKTWR 124
K+ ++ID+ ++ KNFY + +I+ +S K++ K R + P P+++
Sbjct: 57 KNLMQIDWSNVKLVPFEKNFYKEHHDISNLSSKEVKEIRDKHRITILEGEGVPNPVESIS 116
Query: 125 QTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIW 184
+ G +L++ N P IQ + +SG D + ETGSGKTLAF+LP HI
Sbjct: 117 KIGFPDYVLKSLKNNNIVTPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHIL 176
Query: 185 EQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR--------------------------- 214
QP + GD P+ LV+APT EL +RQ+ +
Sbjct: 177 AQPSLKYGD-GPIVLVLAPTRELAEQIRQECVKFSVESKIRNTCAYGGVPKSGQIYALKQ 235
Query: 215 ---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDR 265
GR+IDLL +N +TNL RVTYLVLDEAD+M DMGFE QI +IV+ IRPDR
Sbjct: 236 GVHILIACPGRLIDLLEQN---VTNLMRVTYLVLDEADKMLDMGFEIQIRKIVEQIRPDR 292
Query: 266 QAVLFSPTFPPRVEILAR 283
Q +++S T+P V+ LAR
Sbjct: 293 QTLMWSATWPKEVQSLAR 310
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
KT + IA V +RGLD K+++ V+NFD PN EDYVH ++ +F F++
Sbjct: 407 KTGKSPILIATDVASRGLDIKDVKYVVNFDFPNQIEDYVHRIGRTGRAGAHGASFTFLTS 466
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+ A DLVK SE V L+ ++
Sbjct: 467 DKYRLARDLVKILRESEQPVPPQLEKIS 494
>gi|242023201|ref|XP_002432024.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212517382|gb|EEB19286.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 610
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 125/241 (51%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY+ ++ + S + + ++ I+ K P PI ++ +TGL ++ KLN
Sbjct: 161 FEKNFYSPHPDVLKRSKQEIQDFLNKNEIVIKGKNCPAPIFSFEETGLADDVINIVRKLN 220
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQ+ + +SG + V I TGSGKTL F+LP + HI QP + G D P+ LV
Sbjct: 221 YFAPTPIQSQGWPIALSGQNMVGIARTGSGKTLGFVLPAVIHIQHQPKLERG-DGPIALV 279
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT ELV+Q Q R GR++D L
Sbjct: 280 LAPTRELVQQTQNVAIPFARASGIRSVAVYGGSDKYGQDRHLRNGTEICVATPGRLLDFL 339
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
TNL R TYLVLDEADRMFDMGFEPQI I+ IRPDRQ +++S T+P ++ L
Sbjct: 340 NSG---TTNLERCTYLVLDEADRMFDMGFEPQIRSIIDQIRPDRQVLMWSATWPKEIKRL 396
Query: 282 A 282
A
Sbjct: 397 A 397
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC---AFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D PN+ EDY+H ++ + ++ F+++E+A A D
Sbjct: 499 VATDVAARGLDVSDIRYVINYDYPNNMEDYIHRIGRTGRHNATGTSYTFLTDEDASKAGD 558
Query: 349 LVKAFELSELVVRDDLKAVADS 370
L+ + V DL+ +A S
Sbjct: 559 LISVLREANQNVDPDLENLAMS 580
>gi|119178046|ref|XP_001240731.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 542
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 123/242 (50%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S A+RK+ ++ + K P+P++T+ + G ++
Sbjct: 84 KFEKHFYKEHPNVTNRSAQDVEAFRKEHEMTVYGKNVPRPVETFDEAGFPQYVISEVKAQ 143
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 144 GFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLGPG-DGPIVL 202
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 203 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLSRGVEVCIATPGRLIDM 262
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 263 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 319
Query: 281 LA 282
LA
Sbjct: 320 LA 321
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A +
Sbjct: 419 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTT 478
Query: 341 ENAIYATDLVKAFELSE 357
+NA A DLV S+
Sbjct: 479 DNAKQARDLVNILTESK 495
>gi|24644479|ref|NP_524243.2| Rm62, isoform A [Drosophila melanogaster]
gi|30923187|sp|P19109.3|DDX17_DROME RecName: Full=ATP-dependent RNA helicase p62
gi|23175945|gb|AAG22213.2| Rm62, isoform A [Drosophila melanogaster]
gi|41058179|gb|AAR99134.1| RE11923p [Drosophila melanogaster]
Length = 719
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR++ ++ +R + P PI+ + + L +
Sbjct: 234 VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEVHLPDYV 292
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 293 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 352
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 353 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 411
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 412 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 468
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 469 WPKEVKQLA 477
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 577 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 636
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 637 NNAKQAKALV 646
>gi|143454263|sp|Q5N7W4.2|RH30_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 30
Length = 666
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 129/252 (51%), Gaps = 50/252 (19%)
Query: 79 KIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTK 131
K D++ L KNFY + + MS YR+Q D+ + PKP++ +++
Sbjct: 202 KPDFRSLIPFEKNFYVECPAVQAMSDMDVSQYRRQRDITVEGHDVPKPVRYFQEANFPDY 261
Query: 132 ILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVP 191
++ +K P IQ+ + + G D + I +TGSGKTL++LLP L H+ QP +
Sbjct: 262 CMQAIAKSGFVEPTPIQSQGWPMALKGRDMIGIAQTGSGKTLSYLLPGLVHVGAQPRLEQ 321
Query: 192 GDDSPVGLVMAPTGELVRQ---------------------------QVRR---------- 214
G D P+ L++APT EL Q Q+R
Sbjct: 322 G-DGPIVLILAPTRELAVQIQQESGKFGSYSRTRSTCIYGGAPKGPQIRDLRRGVEIVIA 380
Query: 215 --GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272
GR+ID+L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S
Sbjct: 381 TPGRLIDMLEGGH---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDRQTLYWSA 437
Query: 273 TFPPRVEILARK 284
T+P VE LAR+
Sbjct: 438 TWPREVESLARQ 449
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VINFD P EDY+H ++ AF F +
Sbjct: 543 KSGKSPIMAATDVAARGLDVKDIKCVINFDFPTTLEDYIHRIGRTGRAGASGTAFTFFTL 602
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVA 391
NA ++ +LVK + VV L+++A S ++G G G GG
Sbjct: 603 SNAKFSRNLVKILREAGQVVNPALESMAKS---ASSMGGGNFRSRGRGGFG 650
>gi|322796814|gb|EFZ19232.1| hypothetical protein SINV_01003 [Solenopsis invicta]
Length = 1201
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/254 (35%), Positives = 130/254 (51%), Gaps = 49/254 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
LRK+FY + + S +R+ ++ ++ + P PI+ + + ++E +
Sbjct: 72 LRKDFYIEHPAVRNRSNEEMNRFRENTEITVKGEHVPNPIQYFEEGNFPPYVMENIHREG 131
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQA + +SG D VAI +TGSGKTL ++LP + HI QP + GD P+ L+
Sbjct: 132 YLRPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQPRISSGD-GPIVLI 190
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q VR GR+ID L
Sbjct: 191 LAPTRELAQQIQEVANSFGEMAAVRNTCIFGGAPKGPQAHDLEKGIEICIATPGRLIDFL 250
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 251 EKG---TTNLYRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRAL 307
Query: 282 ARK--TNVCNLSIA 293
A T+ +L+I
Sbjct: 308 AEDFLTDYIHLNIG 321
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 122/243 (50%), Gaps = 49/243 (20%)
Query: 84 QLRKNFY-----TQAREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q RK+FY AR I + YR ++ ++ P P + + G +L +
Sbjct: 664 QFRKDFYQPHPNVMARSIHAVE-GYRSNKEITVKGANVPGPNIYFEEGGFPDYVLNEIRR 722
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P AIQA + +SG D V I +TGSGKTLA++LP + HI QP + +D P+
Sbjct: 723 QGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPRLSR-NDGPIA 781
Query: 199 LVMAPTGELVRQ------------QVRR---------------------------GRMID 219
L++APT EL +Q QVR GR+ID
Sbjct: 782 LILAPTRELAQQIQQVASDFGMSSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRLID 841
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L + TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V
Sbjct: 842 FLERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVR 898
Query: 280 ILA 282
LA
Sbjct: 899 NLA 901
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN D P++ EDYVH +S A+ F + NA A D
Sbjct: 1007 VATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKAGD 1066
Query: 349 LVKAFELSELVVRDDL 364
L++ E ++ VV L
Sbjct: 1067 LIQVLEEAKQVVNPKL 1082
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD +++ VINFD P+ EDY+H ++ K A+ F + N +A D
Sbjct: 414 VATDVAARGLDVDDVKYVINFDFPSSSEDYIHRIGRTGRKRQTGTAYAFFTTHNMKHAGD 473
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGG 389
L++ + V L +A+ +AK G +G GG
Sbjct: 474 LIEVLREAGQNVNPRLSEMAE--MAKAG-NFGGRNGKRFGG 511
>gi|157123872|ref|XP_001653950.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882852|gb|EAT47077.1| AAEL001769-PA [Aedes aegypti]
Length = 718
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 147/286 (51%), Gaps = 58/286 (20%)
Query: 60 KRAKKKKRDKN--REIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIRE 113
KR K++R+ R + ++K+ + +K+F+T A + S Y + ++ +
Sbjct: 36 KRFDKQERNGENLRPVRWDQVKL--EPFKKDFFTPASSVLERSRTEVCQYLDKNEITMIG 93
Query: 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173
K P PI + ++G + L+ + + P +IQA ++ +SG D V I +TGSGKTL
Sbjct: 94 KNVPAPIMQFGESGFPSVFLDEMGRQGFQEPTSIQAVGWSIAMSGRDMVGIAKTGSGKTL 153
Query: 174 AFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------------- 210
A++LP L HI QP ++ G D P+ LV+APT EL +Q
Sbjct: 154 AYILPALIHISNQPRLLRG-DGPIALVLAPTRELAQQIQQVCNDFGRRMSIMNTCIFGGA 212
Query: 211 -------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQI 254
+RR GR+ID L TNL R TYLVLDEADRM DMGFEPQI
Sbjct: 213 SKHPQADDLRRGVEIVIATPGRLIDFLESG---TTNLRRTTYLVLDEADRMLDMGFEPQI 269
Query: 255 TRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
+I+ IRPDRQ +++S T+P + LA + N+ +L++A
Sbjct: 270 RKIISQIRPDRQVLMWSATWPKEIRKLAEEFLREYIQINIGSLNLA 315
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V +RGLD +++ VINFD PN+ EDY+H +S K ++ F + N A D
Sbjct: 403 VATDVASRGLDVDDVKYVINFDFPNNTEDYIHRIGRTGRSTNKGTSYTFFTPANGAKAGD 462
Query: 349 LVKAFELSELVVRDDLKAVA 368
L+ + V +L+ A
Sbjct: 463 LIGVLREANQFVNPELEQYA 482
>gi|303315651|ref|XP_003067830.1| ATP-dependent RNA helicase DBP2, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|442570094|sp|Q1DP69.2|DBP2_COCIM RecName: Full=ATP-dependent RNA helicase DBP2
gi|240107506|gb|EER25685.1| ATP-dependent RNA helicase DBP2, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320034056|gb|EFW16002.1| ATP-dependent RNA helicase DBP2 [Coccidioides posadasii str.
Silveira]
gi|392867306|gb|EJB11300.1| ATP-dependent RNA helicase DBP2 [Coccidioides immitis RS]
Length = 545
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 123/242 (50%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S A+RK+ ++ + K P+P++T+ + G ++
Sbjct: 87 KFEKHFYKEHPNVTNRSAQDVEAFRKEHEMTVYGKNVPRPVETFDEAGFPQYVISEVKAQ 146
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 147 GFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLGPG-DGPIVL 205
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 206 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLSRGVEVCIATPGRLIDM 265
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 266 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 322
Query: 281 LA 282
LA
Sbjct: 323 LA 324
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ K A +
Sbjct: 422 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITLFTT 481
Query: 341 ENAIYATDLVKAFELSE 357
+NA A DLV S+
Sbjct: 482 DNAKQARDLVNILTESK 498
>gi|218192669|gb|EEC75096.1| hypothetical protein OsI_11255 [Oryza sativa Indica Group]
Length = 1023
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 131/248 (52%), Gaps = 45/248 (18%)
Query: 103 YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
Y K L +++ P+ IK++ G +++ +K +E P IQ A +++SG D +
Sbjct: 213 YMKSLAIRVSGFDVPRSIKSFADCGFPVQLMNAIAKQGYEKPTTIQCQALPIVLSGRDII 272
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT AF+LPM+ HI +QP + ++ P+G+V APT EL Q
Sbjct: 273 GIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEGPIGVVCAPTRELAHQIYLEAKKFAKPY 331
Query: 211 ---------------QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
Q + GR+IDLL +K + R TYLVLDEAD
Sbjct: 332 NLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALK---MFRATYLVLDEAD 388
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDE 303
RMFD+GFEPQI IV IRPDRQ +LFS T P +VE LAR+ + I +V G
Sbjct: 389 RMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLARE--ILTDPIRVTVGQVGSAN 446
Query: 304 KELELVIN 311
++++ V+N
Sbjct: 447 EDIKQVVN 454
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---- 331
R+E L + K+ V ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 515 RMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 574
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ +A +LV EL +L ++D
Sbjct: 575 GTAYTLITQKEVRFAGELVHCLIAAGQDVPNELMDLAMKD 614
>gi|147904603|ref|NP_001080569.1| ATP-dependent RNA helicase DDX42 [Xenopus laevis]
gi|82209788|sp|Q7ZY47.1|DDX42_XENLA RecName: Full=ATP-dependent RNA helicase DDX42; AltName: Full=DEAD
box protein 42
gi|27696431|gb|AAH43977.1| Ddx42-prov protein [Xenopus laevis]
Length = 947
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/249 (35%), Positives = 125/249 (50%), Gaps = 47/249 (18%)
Query: 78 IKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKIL 133
+I+Y KNFY + IT +P R +L+L++ P+ ++ G ++L
Sbjct: 203 TEIEYPPFEKNFYEEHEAITSQTPQQITELRHKLNLRVSGAAPPRLCSSFAHFGFDEQLL 262
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
K + P IQ + +SG D + I +TGSGKT AF+ P+L HI +Q + P
Sbjct: 263 HQIRKSEYTQPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPA- 321
Query: 194 DSPVGLVMAPTGELVRQ---QVRR------------------------------------ 214
D P+ +++ PT EL +Q + +R
Sbjct: 322 DGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTP 381
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+ID + K K TNL RVTYLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 382 GRLIDHVKK---KATNLQRVTYLVFDEADRMFDMGFEYQVRSIANHVRPDRQTLLFSATF 438
Query: 275 PPRVEILAR 283
++E LAR
Sbjct: 439 RKKIEKLAR 447
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ V+N+D D + + H ++ K A+ ++ + + +A D
Sbjct: 550 VATDVAARGLDIPSIKTVVNYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTSKESNFAGD 609
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +S+ K G+ GG L +R
Sbjct: 610 LVRNLEGANQYVSKELLDLAMQNSWFRKSRFKAGKGKKLNIGGGGLGYRER 660
>gi|302891875|ref|XP_003044819.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256725744|gb|EEU39106.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 551
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 127/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREI-TRMSP---AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ TR A+R++ + I PKP++T+ + G +++
Sbjct: 95 KFEKSFYKEHEDVATRTDAEVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQ 154
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 155 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPG-DGPIVL 213
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
V+APT EL ++Q++ + GR+ID+
Sbjct: 214 VLAPTRELAVQIKQEIDKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 273
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 274 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMWSATWPKEVRA 330
Query: 281 LA 282
LA
Sbjct: 331 LA 332
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F + +N A
Sbjct: 436 IMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNQKQA 495
Query: 347 TDLVKAFE 354
DLV +
Sbjct: 496 RDLVNVLQ 503
>gi|119481045|ref|XP_001260551.1| RNA helicase (Dbp), putative [Neosartorya fischeri NRRL 181]
gi|134034066|sp|A1DGZ7.1|DBP2_NEOFI RecName: Full=ATP-dependent RNA helicase dbp2
gi|119408705|gb|EAW18654.1| RNA helicase (Dbp), putative [Neosartorya fischeri NRRL 181]
Length = 545
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREIT----RMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ R +RK+ ++ ++ + P+P++ + + G +L
Sbjct: 78 KFEKSFYKEHPDVAARSEREVEEFRKKHEMTVQGRNVPRPVENFDEAGFPQYVLSEVKAQ 137
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 138 GFERPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 196
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 197 ILAPTRELAVQIQTEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 256
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 257 LEAGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKEVRQ 313
Query: 281 LA 282
LA
Sbjct: 314 LA 315
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDY+H ++ K A F +
Sbjct: 413 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 472
Query: 341 ENAIYATDLV 350
EN+ A DLV
Sbjct: 473 ENSKQARDLV 482
>gi|241958200|ref|XP_002421819.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
gi|223645164|emb|CAX39763.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 557
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 128/249 (51%), Gaps = 50/249 (20%)
Query: 81 DYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKIL 133
D +QL KNFY++ ++ S A+RK+ ++ ++ P PI T+ + G +L
Sbjct: 70 DLEQLPKFEKNFYSEHPDVAARSDRDIEAFRKENEMTVKGHDIPHPITTFDEAGFPDYVL 129
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ P AIQ + +SG D + I TGSGKTL++ LP + HI QP + G
Sbjct: 130 QEVKDQGFPKPTAIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHINAQPQLQYG- 188
Query: 194 DSPVGLVMAPTGELVRQ---------------------------QVRR------------ 214
D P+ LV+APT EL Q Q+R
Sbjct: 189 DGPIVLVLAPTRELAVQIQTECAKFGKSSRIRNTCVYGGAPKGPQIRDLARGVEICIATP 248
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+ID+L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+
Sbjct: 249 GRLIDMLEAGK---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATW 305
Query: 275 PPRVEILAR 283
P V+ LAR
Sbjct: 306 PKEVQQLAR 314
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIY 345
++ +A V ARG+D K + VIN+D P + EDYVH ++ A F ++ N+
Sbjct: 416 SIMVATDVAARGIDVKGITHVINYDMPGNIEDYVHRIGRTGRGGASGTAISFFTDGNSKL 475
Query: 346 ATDLVK 351
DL K
Sbjct: 476 GGDLCK 481
>gi|328779158|ref|XP_001122489.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
mellifera]
Length = 616
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 123/245 (50%), Gaps = 47/245 (19%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q RK+FY +T S AYR ++ ++ P P + + G +L +
Sbjct: 68 QPFRKDFYQPHPNVTTRSSHVVEAYRSDKEITVKGTNVPGPNIYFEEGGFPDYVLNEIHR 127
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P AIQA + +SG D V I +TGSGKTLA++LP + HI QP + +D P+
Sbjct: 128 QGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPRLNR-NDGPIA 186
Query: 199 LVMAPTGELVRQ------------QVRR---------------------------GRMID 219
L++APT EL +Q QVR GR+ID
Sbjct: 187 LILAPTRELAQQIQQVASDFGISSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRLID 246
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L + TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V
Sbjct: 247 FLERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVR 303
Query: 280 ILARK 284
LA +
Sbjct: 304 NLAEE 308
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN D P++ EDYVH +S A+ F + NA A+D
Sbjct: 412 VATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKASD 471
Query: 349 LVKAFELSELVVRDDLKAVA 368
L++ E ++ VV L ++
Sbjct: 472 LIQVLEEAKQVVNPKLYELS 491
>gi|380027510|ref|XP_003697466.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 623
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 123/245 (50%), Gaps = 47/245 (19%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q RK+FY +T S AYR ++ ++ P P + + G +L +
Sbjct: 69 QPFRKDFYQPHPNVTTRSSHVVEAYRSDKEITVKGTNVPGPNIYFEEGGFPDYVLNEIHR 128
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P AIQA + +SG D V I +TGSGKTLA++LP + HI QP + +D P+
Sbjct: 129 QGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPRLNR-NDGPIA 187
Query: 199 LVMAPTGELVRQ------------QVRR---------------------------GRMID 219
L++APT EL +Q QVR GR+ID
Sbjct: 188 LILAPTRELAQQIQQVASDFGISSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRLID 247
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L + TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V
Sbjct: 248 FLERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVR 304
Query: 280 ILARK 284
LA +
Sbjct: 305 NLAEE 309
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN D P++ EDYVH +S A+ F + NA A+D
Sbjct: 413 VATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKASD 472
Query: 349 LVKAFELSELVVRDDLKAVA 368
L++ E ++ VV L ++
Sbjct: 473 LIQVLEEAKQVVNPKLYELS 492
>gi|298704856|emb|CBJ28373.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 519
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/244 (38%), Positives = 125/244 (51%), Gaps = 47/244 (19%)
Query: 83 QQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + ++++ S A+R + + I+ + PKP T+ + + +L K
Sbjct: 84 HKFEKNFYIEHPDVSKRSEEETSAWRHKCGIVIQGEGIPKPAMTFEEASMPEYVLREVMK 143
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P IQ+ + + G D V I+ TGSGKTLAFLLP + HI QP + G D P+
Sbjct: 144 QGFSAPTPIQSQGWPMALLGRDMVGISATGSGKTLAFLLPAMIHINAQPYLEQG-DGPIV 202
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL Q QV GR+ID
Sbjct: 203 LVVAPTRELAVQIKEECDKFGRSSEIKNTCVYGGVPKRIQVNDLNRGVEIVIATPGRLID 262
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
LL TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 263 LLESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVQ 319
Query: 280 ILAR 283
LAR
Sbjct: 320 ALAR 323
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD K++++VINFD PN+ EDY+H C ++ K A F +N+ +
Sbjct: 426 VATDVAARGLDVKDIQMVINFDFPNNMEDYIHRIGRCGRAGAKGVAVSFFGSKNSRNGRE 485
Query: 349 LVKAFELSE 357
L+K SE
Sbjct: 486 LIKILTESE 494
>gi|260809021|ref|XP_002599305.1| hypothetical protein BRAFLDRAFT_64339 [Branchiostoma floridae]
gi|229284582|gb|EEN55317.1| hypothetical protein BRAFLDRAFT_64339 [Branchiostoma floridae]
Length = 709
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/244 (36%), Positives = 126/244 (51%), Gaps = 47/244 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++ MS Y + + +R + PKP+ T+ + ++E ++
Sbjct: 95 RFEKNFYREHPNVSNMSQVAAEQYLTERQITVRGREVPKPVTTFAEGSFPDYVMEEIARS 154
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
N E P IQA + +SG D V I +TGSGKTLA++LP + HI QP + G D P+ +
Sbjct: 155 NFEFPTPIQAQGWPIALSGKDLVGIAQTGSGKTLAYMLPAIVHINHQPFLERG-DGPICV 213
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+ PT EL +Q Q+R GR+ID
Sbjct: 214 VLCPTRELAQQVQEVAVQFGHSSRIKNTCVYGGAPKGPQLRDLERGVEICIATPGRLIDF 273
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 274 LEAGK---TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRQ 330
Query: 281 LARK 284
LA +
Sbjct: 331 LAEE 334
>gi|427788853|gb|JAA59878.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 744
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 127/247 (51%), Gaps = 47/247 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I Q +KNFY + S +R+Q ++ +R + P+PI T+++ +
Sbjct: 76 RIQLQPFQKNFYQEHPNTANRSEDEIEQHRRQHEMTLRGRDPPRPILTFQEGCFPDYCMR 135
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
N++ P AIQ+ + +SG D V I +TGSGKTLA++LP + HI QP + GD
Sbjct: 136 MIEAQNYKTPTAIQSQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHITHQPYLQRGD- 194
Query: 195 SPVGLVMAPTGELVRQ---------------------------QVRR------------G 215
PV LV+APT EL +Q Q+R G
Sbjct: 195 GPVALVLAPTRELAQQIQQVASDFGKASRIRNTCVFGGAPKGAQLRDLERGVEICIATPG 254
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID L V NL R TYLVLDEADRM DMGFEPQI +IV+ IRPD Q +++S T+P
Sbjct: 255 RLIDFLEAGKV---NLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDCQTLMWSATWP 311
Query: 276 PRVEILA 282
V LA
Sbjct: 312 KEVRSLA 318
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D P+ EDY+H +S A+ F + N A +
Sbjct: 424 VATDVAARGLDVDDIRFVINYDYPHCSEDYIHRIGRTARSNKTGTAYTFFTPNNMKQAKE 483
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+ + + V L +A+
Sbjct: 484 LIAVLKEANQAVNPKLYEMAN 504
>gi|386765194|ref|NP_001246938.1| Rm62, isoform J [Drosophila melanogaster]
gi|383292518|gb|AFH06257.1| Rm62, isoform J [Drosophila melanogaster]
Length = 458
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR++ ++ +R + P PI+ + + L +
Sbjct: 90 VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEVHLPDYV 148
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 149 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 208
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 209 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 267
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 268 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 324
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 325 WPKEVKQLA 333
>gi|326531018|dbj|BAK04860.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531744|dbj|BAJ97876.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 415
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/258 (35%), Positives = 135/258 (52%), Gaps = 50/258 (19%)
Query: 103 YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
Y K L +++ P+P+K + G ++ +K +E P IQ A +++SG D +
Sbjct: 22 YMKSLAIRVSGFDVPRPVKNFEDCGFPVPLMNAIAKQGYEKPTTIQCQALPIVLSGRDII 81
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT AF+LPM+ HI +QP + ++ P+G++ APT EL Q
Sbjct: 82 GIAKTGSGKTAAFVLPMIVHIMDQPE-LQKEEGPIGVICAPTRELAHQIYLEAKKFAKPY 140
Query: 211 ---------------QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
Q + GR+IDLL +K + R TY VLDEAD
Sbjct: 141 NLQVAAVYGGVSKFEQFKELKSGCEIVVATPGRLIDLL---KMKALRMFRATYSVLDEAD 197
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK--TNVCNLSIANSVRARGL 301
RMFD+GFEPQI IV IRPDRQ +LFS T P +VE LAR+ T++ +++ G
Sbjct: 198 RMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLAREILTDLIRVTVGQV----GS 253
Query: 302 DEKELELVINFDAPNDYE 319
++++ V+N P+D E
Sbjct: 254 ANEDIKQVVNV-LPSDAE 270
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---- 331
R+E L + K+ + ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 324 RMETLQKFKSGIYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 383
Query: 332 SCAFRFISEENAIYATDLVKAF 353
A+ I+++ + +A +LV +
Sbjct: 384 GTAYTLITQKESRFAGELVHSL 405
>gi|195343855|ref|XP_002038506.1| GM10578 [Drosophila sechellia]
gi|194133527|gb|EDW55043.1| GM10578 [Drosophila sechellia]
Length = 724
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR++ ++ +R + P PI+ + + L +
Sbjct: 238 VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEVHLPDYV 296
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 297 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 356
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 357 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 415
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 416 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 472
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 473 WPKEVKQLA 481
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 581 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 640
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 641 NNAKQAKALV 650
>gi|339232568|ref|XP_003381401.1| ATP-dependent RNA helicase DDX42 [Trichinella spiralis]
gi|316979810|gb|EFV62545.1| ATP-dependent RNA helicase DDX42 [Trichinella spiralis]
Length = 741
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/248 (35%), Positives = 123/248 (49%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
KIDY+ KNFY + +I +++ R+++DLK+ APK + ++ G K++
Sbjct: 157 KIDYEPFEKNFYIEHADIAKLTQPQVNELREKMDLKVTGDRAPKLVTSFAHFGFDEKLMS 216
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K P IQA +++SG D + I +TGSGKT A+L P + HI Q + +
Sbjct: 217 LIRKYEFSQPTPIQAQGIPVVMSGRDIIGIAKTGSGKTAAYLWPAIYHIISQRH-LDEKE 275
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
P+ L++ PT EL Q G
Sbjct: 276 GPICLIVVPTRELAIQVYNEAKKYGKYFDIRVVCAYGGGSKWEQSKALAEGAEVVVCTPG 335
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+IDL+ K TN RVTY VLDEADRMFD+GFE Q+ I +IRPDRQ ++FS TF
Sbjct: 336 RIIDLI---KAKATNFERVTYFVLDEADRMFDLGFEAQVRSIADHIRPDRQCLMFSATFK 392
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 393 KKIERLAR 400
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 280 ILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFR 336
I A K + + IA V ARGLD ++ VIN+D D + +VH ++ K A+
Sbjct: 491 IHAFKKDDVPILIATDVAARGLDIPTIKTVINYDVAKDLDTHVHRIGRTGRAGEKGFAYT 550
Query: 337 FISEENAIYATDLVKAFE 354
+++++ +A LVK+ E
Sbjct: 551 LVTDKDKEFAGHLVKSLE 568
>gi|378733552|gb|EHY60011.1| ATP-dependent RNA helicase dbp2 [Exophiala dermatitidis NIH/UT8656]
Length = 538
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S +R++ ++ ++ + P+P++T+ + G + ++
Sbjct: 74 KFEKSFYKEDPAVTARSQRDVDEFRRKHEITVQGRNVPRPVETFDEAGFPSYVMNEVKAQ 133
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 134 GFTHPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 192
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 193 VLAPTRELAVQIQQEMTKFGKSSRIRNTCVYGGVPKGGQIRDLARGVEVCIATPGRLIDM 252
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 253 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 309
Query: 281 LA 282
LA
Sbjct: 310 LA 311
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V N+D PN+ EDYVH ++ K A +
Sbjct: 409 KTGKSPVMVATDVASRGIDVRDITHVFNYDYPNNSEDYVHRIGRTGRAGRKGTAITLFTT 468
Query: 341 ENAIYATDLVKAFELSE 357
ENA A DL+ + S+
Sbjct: 469 ENAKQARDLLHILQESK 485
>gi|365988008|ref|XP_003670835.1| hypothetical protein NDAI_0F02740 [Naumovozyma dairenensis CBS 421]
gi|343769606|emb|CCD25592.1| hypothetical protein NDAI_0F02740 [Naumovozyma dairenensis CBS 421]
Length = 561
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 123/241 (51%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + + S A +RK+ ++ I PKPI ++ + G +L+
Sbjct: 78 FEKNFYVEHETVRNRSDAEVAEFRKKNEMTISGHDIPKPITSFDEAGFPDYVLKEVKAEG 137
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQ + +SG D + + TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 138 FDAPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPIVLV 196
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
+APT EL QQ+R GR+ID+L
Sbjct: 197 LAPTRELAVQIQKECSKFGHSSRIRNTCVYGGVPRGQQIRDLSRGSEIVIATPGRLIDML 256
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ L
Sbjct: 257 ---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQL 313
Query: 282 A 282
A
Sbjct: 314 A 314
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARG+D K + VIN+D P + EDYVH ++ K A F +E+N
Sbjct: 418 IMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGAKGTAISFFTEDNKSLG 477
Query: 347 TDLV 350
L+
Sbjct: 478 ASLI 481
>gi|440797060|gb|ELR18155.1| ATPdependent RNA helicase DBP2, putative, partial [Acanthamoeba
castellanii str. Neff]
Length = 536
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/292 (35%), Positives = 142/292 (48%), Gaps = 58/292 (19%)
Query: 46 AEDSHSASDYELFMKRAKKKKRDKNREIIKSKIKIDYQQL---RKNFYTQAREITRM--- 99
+DS SA+ F + + D + K K + +L +K+FY + ++ M
Sbjct: 14 GDDSGSAASGSFFDRIKNSRFEDLVGSLAKPKWEAKAGKLAHFKKDFYVEHPDVASMPEA 73
Query: 100 ------SPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASA 153
A K +D+K P+PI + Q GL +++ S+ P +IQ A
Sbjct: 74 EVARILEEAQIKVVDIKPGATPPPRPIVEFSQAGLPRAMVDRLSRNGITRPSSIQTQAIP 133
Query: 154 LIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--- 210
+ +SG D V +TGSGKTLAF LP HI QPP+ G D PVGLV+APT EL Q
Sbjct: 134 IALSGRDMVGRAQTGSGKTLAFALPACVHIGAQPPLRSG-DGPVGLVLAPTRELALQIQA 192
Query: 211 ------------------------------QVRR---------GRMIDLLCKNGVKITNL 231
+RR GR++DLL + +TNL
Sbjct: 193 EVARYALLPDGSPLRSACVYGGASKVPQIKDLRRGVHMLIATPGRLLDLLQ---MGVTNL 249
Query: 232 TRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
RVTYLV+DEADRM DMGFE QI IV IRPDRQ +++S T+P VE LA+
Sbjct: 250 ERVTYLVMDEADRMLDMGFEQQIRAIVDQIRPDRQTLMWSATWPKEVESLAQ 301
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K + IA V ARGLD K +E V+NFD P + EDYVH ++ K A+ F++
Sbjct: 397 KRGHVDFLIATDVAARGLDVKNIECVVNFDFPGNLEDYVHRIGRTGRAGAKGTAYSFLTN 456
Query: 341 ENAIYATDLVK 351
+ LVK
Sbjct: 457 SHDKMIPKLVK 467
>gi|336469239|gb|EGO57401.1| ATP-dependent RNA helicase dbp-2 [Neurospora tetrasperma FGSC 2508]
gi|350291128|gb|EGZ72342.1| ATP-dependent RNA helicase dbp-2 [Neurospora tetrasperma FGSC 2509]
Length = 558
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + + SPA +R + I PKP++T+ + G +++
Sbjct: 87 KFEKSFYQEHPSVANRSPAEVDKFRADHSIAIFGNNVPKPVETFDEAGFPRYVMDEVKAQ 146
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 147 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 205
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 206 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 265
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 266 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRN 322
Query: 281 LA 282
LA
Sbjct: 323 LA 324
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 424 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 483
Query: 341 ENAIYATDLVKAFE 354
+N+ A +LV +
Sbjct: 484 DNSKQARELVGVLQ 497
>gi|294934696|ref|XP_002781195.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239891530|gb|EER12990.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 584
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 143/283 (50%), Gaps = 46/283 (16%)
Query: 87 KNFYTQAREITRMS----PAYRKQLDLKIR-EKCAPKPIKTWRQTGLTTKILETFSKLNH 141
KNFY + ++ + A+ + D+ ++ PKPI+T+ Q +++ F K +
Sbjct: 135 KNFYKEHPDVAAFTDEDCAAFLAEADITVQGTPPIPKPIRTFEQGQFPEVLMKEFEKAGY 194
Query: 142 ENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVM 201
P IQ + +SG D V + +TGSGKT+AF+LP + H+ Q P+ G D PV LV+
Sbjct: 195 TEPTNIQKIGWPVALSGRDMVGVAQTGSGKTVAFMLPAIIHVNAQAPLKHG-DGPVVLVL 253
Query: 202 APTGELVRQ----QVRRGRMIDLL----------------CKNGVKI------------- 228
PT EL Q R G+M L+ + GV+I
Sbjct: 254 VPTRELAMQVQAEATRFGKMAGLMNTAIFGGVPRYNQANDLRRGVEICIATPGRLLDFLE 313
Query: 229 ---TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR-- 283
TNL RVTYLVLDEADRM DMGFEPQI RIV IRPDRQ ++S T+P V+ +AR
Sbjct: 314 TGVTNLKRVTYLVLDEADRMLDMGFEPQIRRIVSQIRPDRQTTMWSATWPKEVQSMARDF 373
Query: 284 -KTNVCNLSIANSVRARGLDEKE-LELVINFDAPNDYEDYVHH 324
+ L++ N+ D K+ +E+V D + D++
Sbjct: 374 CREEPIRLTVGNTQLQANPDVKQRVEVVSEMDKRQMFFDWLKE 416
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHH 324
KT CN+ +A V RGLD K +E V+N+D P EDYVH
Sbjct: 468 KTGRCNVLVATDVAQRGLDIKNVEWVVNYDMPKTVEDYVHR 508
>gi|158530232|gb|ABW71831.1| putative RNA helicase [Phytophthora infestans]
Length = 544
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 132/255 (51%), Gaps = 50/255 (19%)
Query: 74 IKSKIKIDYQQL---RKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQT 126
+ + I+ D +L KNFY + ++T+ S +++ + + K PK + ++ +
Sbjct: 87 LDTHIQWDLSKLPVFEKNFYYEHPDVTKRSEDEYEKWKRDNQIIVSGKGVPKCVLSFEEA 146
Query: 127 GLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQ 186
+LE +L + P IQ + +SG D V I+ TGSGKTLAFLLP + HI Q
Sbjct: 147 SFPEYVLEEVVRLGFDKPTPIQCQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQ 206
Query: 187 PPVVPGDDSPVGLVMAPTGELVRQ------------------------------QVRR-- 214
P + PG D P+ L++APT EL Q +RR
Sbjct: 207 PYLQPG-DGPIVLMIAPTRELAVQIQAECNKFGASSKIKNTCVYGGVPKGGQIADLRRGV 265
Query: 215 -------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQA 267
GRMID+L + TNL RVTYLVLDEADRM DMGFEPQ+ +IV IRPDRQ
Sbjct: 266 EICICTPGRMIDML---SMGKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQT 322
Query: 268 VLFSPTFPPRVEILA 282
+++S T+P + LA
Sbjct: 323 LMWSATWPKEIVALA 337
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILAR-KTNVCNLSIANSVRARGLDEKELELVIN 311
+++R ++N R +A+ + + R +L K + +A V +RGLD K++ V+N
Sbjct: 401 ELSRNLRNTRYICKAIHGNKSQEERDYVLREFKDGRTQILVATDVASRGLDIKDIRYVVN 460
Query: 312 FDAPNDYEDYVHHCCQSWL-----KSCAFRFISEENAIYATDLVKAFELSELVVRDDLK 365
FD P + EDY+H ++ S +F F + N A LVK E +E V +L+
Sbjct: 461 FDMPKNIEDYIHRIGRTARAGNKGTSISF-FTASNNGRLAGPLVKIMEEAEQEVPRELR 518
>gi|189242416|ref|XP_001811064.1| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 1142
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 148/296 (50%), Gaps = 56/296 (18%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIKSKI--KIDYQQLRKNFYTQAREI----TRMSPAY 103
H+ + + F + KK+ +++++I + I+ + RKNFY + T+ ++
Sbjct: 473 HTMAPVQDFGGPKQYKKKQEDQQLINLSLWNGIELKPFRKNFYIPHNNVKNRATQDVDSF 532
Query: 104 RKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVA 163
R+ D+ +R P P + + I++ K P AIQ+ +++SG D V
Sbjct: 533 REVKDIIVRGNDVPSPNLCFDEGNFPEYIMQVILKQGFAEPTAIQSQGWPVVLSGRDLVG 592
Query: 164 ITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------- 210
I +TGSGKTLA++LP + HI Q G+ PV L++APT EL +Q
Sbjct: 593 IAQTGSGKTLAYMLPAVVHINNQQRPQRGE-GPVALILAPTRELAQQIQKVAHEFGSTTM 651
Query: 211 --------------QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADR 244
Q R GR+ID L K TNL R TYLVLDEADR
Sbjct: 652 VRNTCIFGGSPKGPQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADR 708
Query: 245 MFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
M DMGFEPQI +I+Q IRPDRQ +++S T+P +V+ LA + N+ LS+A
Sbjct: 709 MLDMGFEPQIRKIIQQIRPDRQVLMWSATWPKQVQALAEEFLVDYIQVNIGGLSLA 764
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 275 PPRVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQS 328
P R +L+ +T ++ +A V ARGLD ++++ VINFD PN EDYVH CQ
Sbjct: 834 PERDYVLSEFRTGKSSILVATDVAARGLDVEDVKYVINFDYPNSSEDYVHRIGRTGRCQQ 893
Query: 329 WLKSCAFRFISEENAIYATDLVKAFELSELVVRDDLKAVADS 370
A+ F + N A DL+ E + V +L+ +A +
Sbjct: 894 --AGTAYAFFTSNNQRQAKDLIAVLEEAGQNVSAELRDLAQN 933
>gi|386765198|ref|NP_001246940.1| Rm62, isoform L [Drosophila melanogaster]
gi|383292520|gb|AFH06259.1| Rm62, isoform L [Drosophila melanogaster]
Length = 473
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR++ ++ +R + P PI+ + + L +
Sbjct: 90 VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEVHLPDYV 148
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 149 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 208
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 209 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 267
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 268 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 324
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 325 WPKEVKQLA 333
>gi|428183429|gb|EKX52287.1| hypothetical protein GUITHDRAFT_161357 [Guillardia theta CCMP2712]
Length = 593
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 133/267 (49%), Gaps = 66/267 (24%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTG--LTTKI 132
K D +KNFY + ++ +SP + ++L++++ + AP+PI T+ Q G +
Sbjct: 85 KWDLPVFQKNFYKEHPQVAALSPEEVQSITERLEIRMEGEDAPRPILTFEQVGGGFPQYV 144
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
L ++ P +Q+ + +SG D V I ETGSGKTL+FLLP + H+ QP + PG
Sbjct: 145 LTQIAQEGFVEPTPVQSIGWPIALSGRDGVCIAETGSGKTLSFLLPAIVHVNAQPALRPG 204
Query: 193 DDSPVGLVMAPTGELVRQ------------------------------------------ 210
D P+ LV+APT EL +Q
Sbjct: 205 -DGPIVLVLAPTRELAQQIQDVAYKFGRSSRLRSTCGEREGEVDIFLSSWTGAVFGGAPK 263
Query: 211 -----QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
+RRG R+ID L TNL RVTYLVLDEADRM DMGFEPQI
Sbjct: 264 GPQAGSLRRGIDICVGTPGRLIDFLETG---TTNLRRVTYLVLDEADRMLDMGFEPQIRS 320
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILAR 283
IV IRPDRQ ++F+ T+P V+ +A+
Sbjct: 321 IVSQIRPDRQTLMFTATWPTEVQAMAQ 347
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K C + +A V +RGLD ++ LV+N+D P DYVH ++ A+ F +
Sbjct: 446 KRGDCQILVATDVASRGLDVNDVLLVVNYDMPGQISDYVHRIGRTGRAGRSGTAYSFFTR 505
Query: 341 ENAIYAT---DLVKA 352
+A T L+KA
Sbjct: 506 NDAAIGTLGPALIKA 520
>gi|386765200|ref|NP_001246941.1| Rm62, isoform M [Drosophila melanogaster]
gi|383292521|gb|AFH06260.1| Rm62, isoform M [Drosophila melanogaster]
Length = 478
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR++ ++ +R + P PI+ + + L +
Sbjct: 90 VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQV-PNPIQDFSEVHLPDYV 148
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 149 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 208
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 209 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 267
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 268 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 324
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 325 WPKEVKQLA 333
>gi|332025289|gb|EGI65460.1| Putative ATP-dependent RNA helicase DDX17 [Acromyrmex echinatior]
Length = 706
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/318 (32%), Positives = 151/318 (47%), Gaps = 61/318 (19%)
Query: 48 DSHSASDYELFMKRAKKKKRDKNREIIKSKIKI-DYQQLRKNFYTQAREITRMSP----A 102
+S S E K+ + K+ + K + + ++ KN Y I +P
Sbjct: 29 NSQQQSQKEFGTKKQQNHKKTPGDLLKKPSWDLTNMPKITKNLYVPHVNILNRTPDEISK 88
Query: 103 YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
Y ++ ++ P PI+ + ++ ++E K P AIQA + +SG D V
Sbjct: 89 YHAGKEITVKGNNTPSPIQAFEESNFPDYVMEEIRKQGFAEPTAIQAQGWPIALSGRDLV 148
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKTLA++LP HI QP + GD P+ L++APT EL +Q
Sbjct: 149 GIAQTGSGKTLAYILPATVHINHQPRLSRGD-GPIVLILAPTRELAQQIQTVARDFGSSS 207
Query: 211 ---------------QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
Q R GR+ID L K TNL R TYLVLDEAD
Sbjct: 208 CIRNTCIFGGSPKGPQARDLERGVEICIATPGRLIDFLEKG---TTNLRRCTYLVLDEAD 264
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIANSV 296
RM DMGFEPQI +I++ IRPDRQ +++S T+P V+ LA + N+ +L++A +
Sbjct: 265 RMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLSDYIQINIGSLTLAANH 324
Query: 297 RARGL------DEKELEL 308
R + EKE++L
Sbjct: 325 NIRQIVEICQEHEKEMKL 342
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEENAIYA 346
+A V ARGLD ++++ VINFD PN EDY+H CQS A+ + + NA A
Sbjct: 409 VATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCQS--AGTAYAYFTPNNARQA 466
Query: 347 TDLVKAFELSELVVRDDLKAVADS 370
+L+ E + + L +A+S
Sbjct: 467 KELIAVLEEAGQAINPQLADMANS 490
>gi|50554139|ref|XP_504478.1| YALI0E27715p [Yarrowia lipolytica]
gi|74659776|sp|Q6C4D4.1|DBP2_YARLI RecName: Full=ATP-dependent RNA helicase DBP2
gi|49650347|emb|CAG80081.1| YALI0E27715p [Yarrowia lipolytica CLIB122]
Length = 552
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/260 (36%), Positives = 132/260 (50%), Gaps = 50/260 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
Q KNFY + +T + A+RK+ + + PKP+ + + G +L+ +
Sbjct: 75 QFEKNFYKEDPAVTERTDEEVTAFRKENQMTLHGDGIPKPVTNFDEAGFPPYVLKEVKQQ 134
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ + ++G D + I TGSGKTL++ LP + HI QP + G D P+ L
Sbjct: 135 GFEKPTAIQCQGWPMALTGRDVIGIASTGSGKTLSYCLPAIVHINAQPMLSHG-DGPIVL 193
Query: 200 VMAPTGELVRQ---------------------QVRRGRMIDLLCKNGVKI---------- 228
V+APT EL Q V RG+ I L + GV+I
Sbjct: 194 VLAPTRELAVQIQQECSKFGKSSKIRNTCVYGGVPRGQQIRDLAR-GVEIVIATPGRLLD 252
Query: 229 ------TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILA 282
TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+ LA
Sbjct: 253 MLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQRLA 312
Query: 283 R-------KTNVCNLSIANS 295
+ N+ +L ++ S
Sbjct: 313 HDYLKDQIQVNIGSLELSAS 332
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V +RG+D K + VIN+D P++ EDYVH ++ K A+ + +E+N A
Sbjct: 416 IMVATDVASRGIDVKGINFVINYDYPSNSEDYVHRIGRTGRAGTKGTAYTYFTEDNRKQA 475
Query: 347 TDLV 350
DL+
Sbjct: 476 RDLL 479
>gi|338721130|ref|XP_001916530.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Equus
caballus]
Length = 793
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 147/304 (48%), Gaps = 56/304 (18%)
Query: 42 RRLPAEDSHSASDYELFMKRAKKKKRDKNREIIKSKIKI-DYQQLRKNFYTQAREITRMS 100
RRLPA + A KK + + K K + + + KNFY + E+ R++
Sbjct: 148 RRLPAAPTAEAFGARGGGGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHPEVARLT 207
Query: 101 P----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALI 155
P R++ ++ +R PKP+ + +++ + P IQ L
Sbjct: 208 PYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLA 267
Query: 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----- 210
+SG D V I +TGSGKTLA+LLP + HI QP + GD P+ LV+APT EL +Q
Sbjct: 268 LSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPICLVLAPTRELAQQVQQVA 326
Query: 211 ----------------------QVRR------------GRMIDLLCKNGVKITNLTRVTY 236
Q+R GR+ID L ++G TNL R TY
Sbjct: 327 DDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFL-ESGK--TNLRRCTY 383
Query: 237 LVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCN 289
LVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V LA + NV N
Sbjct: 384 LVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGN 443
Query: 290 LSIA 293
L ++
Sbjct: 444 LELS 447
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 535 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 594
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 595 LIKVLEEANQAINPKLMQLVD 615
>gi|367051040|ref|XP_003655899.1| hypothetical protein THITE_2120154 [Thielavia terrestris NRRL 8126]
gi|347003163|gb|AEO69563.1| hypothetical protein THITE_2120154 [Thielavia terrestris NRRL 8126]
Length = 568
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S A +R+ + + + PKP++T+ + G +++
Sbjct: 99 KFEKSFYQEHPNVSNRSQAEVDKFRRDHAITVSGRDVPKPVETFDEAGFPRYVMDEVKAQ 158
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 159 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 217
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 218 VLAPTRELAVQIQQEMTKFGKSSRIRNTCVYGGVPKGPQIRDLQRGVEVCIATPGRLIDM 277
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 278 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRN 334
Query: 281 LA 282
LA
Sbjct: 335 LA 336
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 436 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 495
Query: 341 ENAIYATDLVKAFE 354
+NA A DLV +
Sbjct: 496 DNAKQARDLVSVLQ 509
>gi|410076612|ref|XP_003955888.1| hypothetical protein KAFR_0B04560 [Kazachstania africana CBS 2517]
gi|372462471|emb|CCF56753.1| hypothetical protein KAFR_0B04560 [Kazachstania africana CBS 2517]
Length = 543
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 123/241 (51%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + ++ S A +R++ ++ I PKPI + + G +L+
Sbjct: 70 FEKNFYVEHEDVRNRSDADVAKFRQENEMTISGHDIPKPITNFEEAGFPDYVLKEVKAEG 129
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P +IQ + +SG D V I TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 130 FDKPTSIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPIVLV 188
Query: 201 MAPTGELV---------------------------RQQVRR------------GRMIDLL 221
++PT EL QQ+R GR+ID++
Sbjct: 189 LSPTRELAVQIQKECSKFGHSSRIRNTCVYGGVPKGQQIRDLVRGAEIVIATPGRLIDMM 248
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V L
Sbjct: 249 ---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 305
Query: 282 A 282
A
Sbjct: 306 A 306
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARG+D K + VIN+D P + EDYVH ++ K A F +E+N
Sbjct: 410 IMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGAKGTAISFFTEDNKSLG 469
Query: 347 TDLVKAFELSELVVRDDL 364
L+ ++ + ++L
Sbjct: 470 AKLISIMREAKQTIPNEL 487
>gi|296423641|ref|XP_002841362.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637599|emb|CAZ85553.1| unnamed protein product [Tuber melanosporum]
Length = 568
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 97/168 (57%), Gaps = 40/168 (23%)
Query: 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR- 214
+SG + + + +TGSGKT+AFLLPM RHI +Q P+ + P+ L+M PT EL Q +
Sbjct: 1 MSGRNVIGVAKTGSGKTIAFLLPMFRHIKDQRPL-ESQEGPISLIMTPTRELAVQIFKEC 59
Query: 215 --------------------------------------GRMIDLLCKNGVKITNLTRVTY 236
GRMIDLL N ++TNL RVTY
Sbjct: 60 KPFLKALNLRAVCAYGGSPIKDQIADLKRGAEIIVCTPGRMIDLLAANSGRVTNLKRVTY 119
Query: 237 LVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
+VLDEADRMFDMGFEPQ+ +I+ N+RPDRQ VLFS TFP +E LARK
Sbjct: 120 IVLDEADRMFDMGFEPQVMKIISNVRPDRQTVLFSATFPRNMEALARK 167
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 306 LELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATDLVKAFELSELVVRD 362
L+LV+N+D PN EDYVH ++ A FI+EE YA D+ KA S V +
Sbjct: 266 LKLVVNYDCPNHMEDYVHRVGRTGRAGNTGTAVTFITEEQDRYAVDIAKALRQSGQKVPE 325
Query: 363 DLKAVADSFIAKVNLGLGQVHGTGHGGVAL-------NLMKRRIRR 401
++ + D F KV G + G+G GG L +L +RR R+
Sbjct: 326 PVQRLVDDFNEKVKTGKEKASGSGFGGKGLEKLDQERDLARRRERK 371
>gi|255722413|ref|XP_002546141.1| hypothetical protein CTRG_00923 [Candida tropicalis MYA-3404]
gi|240136630|gb|EER36183.1| hypothetical protein CTRG_00923 [Candida tropicalis MYA-3404]
Length = 464
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 123/242 (50%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFYT+ A R +R++ ++ I + P PI ++ + G +L +L
Sbjct: 86 KFEKNFYTEHPNVASRSDREIDQFRRENEMTIEGRDIPHPITSFDEAGFPDYVLSELKEL 145
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ + +SG D V I TGSGKTL++ LP + HI QP + GD P+ L
Sbjct: 146 GFPKPTAIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPSIVHINAQPELQYGD-GPIVL 204
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 205 VLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKGPQIRDLNKGVEICIATPGRLIDM 264
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P VE
Sbjct: 265 LEAGK---TNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVER 321
Query: 281 LA 282
LA
Sbjct: 322 LA 323
>gi|343959846|dbj|BAK63780.1| probable ATP-dependent RNA helicase DDX17 [Pan troglodytes]
Length = 642
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 42 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 101
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 102 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 160
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 161 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 220
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 221 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 277
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 278 QLAEDFLRDYTQINVGNLELS 298
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 386 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 445
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 446 LIKVLEEANQAINPKLMQLVD 466
>gi|194898941|ref|XP_001979021.1| GG10666 [Drosophila erecta]
gi|190650724|gb|EDV47979.1| GG10666 [Drosophila erecta]
Length = 720
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 130/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR + ++ +R + P PI+ + + L +
Sbjct: 234 VDFSNLAPFKKNFYQEHPNVANRSPYDVQRYRDEQEITVRGQV-PNPIQDFSEVYLPDYV 292
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 293 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 352
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 353 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 411
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 412 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 468
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 469 WPKEVKQLA 477
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 577 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 636
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 637 NNAKQAKALV 646
>gi|346318212|gb|EGX87816.1| ATP-dependent RNA helicase dbp-2 [Cordyceps militaris CM01]
Length = 576
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 125/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY ++ S A+R + + I PKP++T+ + G +++
Sbjct: 114 KFEKDFYKVNSDVENRSDAEVEAFRAKHQMTIAGSAVPKPVETFDEAGFPRYVMDEVKAQ 173
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 174 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 232
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
V+APT EL ++Q++ + GR+ID+
Sbjct: 233 VLAPTRELAVQIQQEITKFGRSSRIRNTCVYGGVPKGPQTRDLARGVEVCIATPGRLIDM 292
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 293 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRA 349
Query: 281 LA 282
+A
Sbjct: 350 MA 351
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KTN + +A V +RG+D + + V+N+D PN+ EDY+H ++ A +
Sbjct: 449 KTNKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGATGTAITLFTT 508
Query: 341 ENAIYATDLVKAFE 354
+N A +LV +
Sbjct: 509 DNQKQARELVNVLQ 522
>gi|410055921|ref|XP_003953938.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 1 [Pan
troglodytes]
Length = 642
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 42 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 101
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 102 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 160
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 161 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 220
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 221 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 277
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 278 QLAEDFLRDYTQINVGNLELS 298
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 386 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 445
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 446 LIKVLEEANQAINPKLMQLVD 466
>gi|386765196|ref|NP_001246939.1| Rm62, isoform K [Drosophila melanogaster]
gi|383292519|gb|AFH06258.1| Rm62, isoform K [Drosophila melanogaster]
Length = 485
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 131/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR++ ++ +R + P PI+ + + L +
Sbjct: 90 VDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQ-VPNPIQDFSEVHLPDYV 148
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 149 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 208
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 209 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 267
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 268 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 324
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 325 WPKEVKQLA 333
>gi|84996983|ref|XP_953213.1| DEAD-box family RNA-dependent helicase [Theileria annulata strain
Ankara]
gi|65304209|emb|CAI76588.1| DEAD-box family RNA-dependent helicase, putative [Theileria
annulata]
Length = 616
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 129/252 (51%), Gaps = 51/252 (20%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKI-REKCAPKPIKTWRQTGLTTKIL 133
+++ + KNFY + E+ MS + R++ ++ + + PKP+ + T IL
Sbjct: 141 QVELVKFEKNFYVEHPEVKAMSYSEADKIRREKEITVVHGRDVPKPVVKFEYTSFPRYIL 200
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETG---SGKTLAFLLPMLRHIWEQPPVV 190
+ + P IQ A + +SG D + I ETG SGKTLAFLLP + HI Q +
Sbjct: 201 SSIESAGFKEPTPIQVQAWPIALSGRDMIGIAETGITRSGKTLAFLLPAIVHINAQALLR 260
Query: 191 PGDDSPVGLVMAPTGELVRQ------------------------------QVRRG----- 215
PGD P+ LV+APT EL Q +RRG
Sbjct: 261 PGD-GPIVLVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKKFQTIALRRGVEILI 319
Query: 216 ----RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
R+ID L N +TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++FS
Sbjct: 320 ACPGRLIDFLESN---VTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFS 376
Query: 272 PTFPPRVEILAR 283
T+P V L+R
Sbjct: 377 ATWPKEVISLSR 388
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + IA V +RGLD ++++ VIN+D P EDYVH ++ +K ++ F++
Sbjct: 484 KTGKHPIMIATDVASRGLDVRDVKYVINYDFPGQIEDYVHRIGRTGRAGMKGSSYTFLTP 543
Query: 341 ENAIYATDLVK 351
+ A +LVK
Sbjct: 544 DKFKSARELVK 554
>gi|315040958|ref|XP_003169856.1| ATP-dependent RNA helicase DBP2 [Arthroderma gypseum CBS 118893]
gi|311345818|gb|EFR05021.1| ATP-dependent RNA helicase DBP2 [Arthroderma gypseum CBS 118893]
Length = 558
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +++ S A+RK+ ++ + K P+P++T+ + G ++
Sbjct: 100 KFEKSFYKEHPDVSARSTQEVEAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQ 159
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 160 GFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 218
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 219 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLTRGVEVCIATPGRLIDM 278
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 279 LESGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKDVRQ 335
Query: 281 LA 282
LA
Sbjct: 336 LA 337
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N D PN+ EDYVH ++ A +
Sbjct: 435 KTGKSPIMVATDVASRGIDVRDITHVLNHDYPNNSEDYVHRIGRTGRAGANGTAITLFTT 494
Query: 341 ENAIYATDLVK 351
ENA A DLVK
Sbjct: 495 ENAKQARDLVK 505
>gi|93587673|ref|NP_001035277.1| probable ATP-dependent RNA helicase DDX17 isoform 4 [Mus musculus]
gi|76364169|sp|Q501J6.1|DDX17_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX17; AltName:
Full=DEAD box protein 17
gi|63146347|gb|AAH96036.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Mus musculus]
Length = 650
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|40068493|ref|NP_951062.1| probable ATP-dependent RNA helicase DDX17 isoform 1 [Mus musculus]
gi|74181626|dbj|BAE30078.1| unnamed protein product [Mus musculus]
gi|74220643|dbj|BAE31531.1| unnamed protein product [Mus musculus]
gi|148672698|gb|EDL04645.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_a [Mus
musculus]
Length = 652
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|297261056|ref|XP_001092491.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Macaca
mulatta]
gi|297708870|ref|XP_002831174.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Pongo abelii]
gi|1592565|gb|AAC50787.1| DEAD-box protein p72 [Homo sapiens]
gi|119580650|gb|EAW60246.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_f [Homo
sapiens]
Length = 650
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|91206541|sp|Q7SBC6.2|DBP2_NEUCR RecName: Full=ATP-dependent RNA helicase dbp-2
Length = 562
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + + SPA +R + + PKP++T+ + G +++
Sbjct: 91 KFEKSFYQEHPSVANRSPAEVDKFRADHSIAVFGNNVPKPVETFDEAGFPRYVMDEVKAQ 150
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 151 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 209
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 210 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 269
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 270 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRN 326
Query: 281 LA 282
LA
Sbjct: 327 LA 328
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 428 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 487
Query: 341 ENAIYATDLVKAFE 354
+N+ A +LV +
Sbjct: 488 DNSKQARELVGVLQ 501
>gi|397501955|ref|XP_003821639.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Pan paniscus]
gi|402884232|ref|XP_003905591.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Papio anubis]
gi|410055919|ref|XP_525595.4| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 2 [Pan
troglodytes]
gi|426394473|ref|XP_004063520.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Gorilla
gorilla gorilla]
gi|47678395|emb|CAG30318.1| DDX17 [Homo sapiens]
gi|109451124|emb|CAK54423.1| DDX17 [synthetic construct]
gi|109451702|emb|CAK54722.1| DDX17 [synthetic construct]
gi|119580647|gb|EAW60243.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_c [Homo
sapiens]
gi|208967743|dbj|BAG72517.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [synthetic construct]
Length = 652
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|440492144|gb|ELQ74738.1| ATP-dependent RNA helicase [Trachipleistophora hominis]
Length = 482
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 126/241 (52%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY ++ ++ MS +R + +KI + PKPI + +L F K +
Sbjct: 35 FEKNFYRESARVSEMSEKEVSEFRAKNQMKIIGEGVPKPIIDFEDINFGEGVLNYFRKKD 94
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
++P+AIQA + +SG D V I +TGSGKT++F LP L H Q P+ P +D P+ L+
Sbjct: 95 FKSPMAIQAQGWPMALSGRDMVGIAQTGSGKTISFALPALVHAAAQVPLRP-NDGPIALI 153
Query: 201 MAPTGELV------------------------------RQQVRR---------GRMIDLL 221
+APT EL RQ +RR GR+IDL+
Sbjct: 154 LAPTRELCMQIQEVVEEYDRFFNMRSLAVYGGVSAFPQRQAIRRGVEVLVATPGRLIDLM 213
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ + +L+RVTYLVLDEADRM DMGFEPQ+ I+ PDRQ +++S T+P V L
Sbjct: 214 EQGCI---HLSRVTYLVLDEADRMLDMGFEPQLRSIIPRTNPDRQTLMWSATWPQEVRDL 270
Query: 282 A 282
A
Sbjct: 271 A 271
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS----WLKSCAFRFIS 339
K+ N+ IA V ARGLD K+++ VINFD P + + Y+H ++ + A F +
Sbjct: 365 KSGRKNILIATDVAARGLDVKDVQAVINFDFPPNCDSYIHRIGRTARGNQKEGLAIAFFT 424
Query: 340 EENAIYATDLVKAFELSELVVRDDLKAV 367
+E+ A +LV + + V +DL +
Sbjct: 425 QEDRGNAAELVNILKNAGQSVPEDLAQI 452
>gi|52545677|emb|CAH10627.2| hypothetical protein [Homo sapiens]
Length = 652
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 292 IANSVRARGL--DEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
IA V +RGL D ++++ VIN+D PN EDYVH +S K A+ F + N A
Sbjct: 394 IATDVASRGLGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQA 453
Query: 347 TDLVKAFELSELVVRDDLKAVAD 369
+L+K E + + L + D
Sbjct: 454 RELIKVLEEANQAINPKLMQLVD 476
>gi|345777025|ref|XP_860668.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 11
[Canis lupus familiaris]
gi|431905181|gb|ELK10228.1| Putative ATP-dependent RNA helicase DDX17 [Pteropus alecto]
Length = 652
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|328697410|ref|XP_001948642.2| PREDICTED: probable ATP-dependent RNA helicase DDX5-like
[Acyrthosiphon pisum]
Length = 718
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/256 (37%), Positives = 129/256 (50%), Gaps = 46/256 (17%)
Query: 83 QQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q +K+FY + SP YR + IR P P + + + +++ K
Sbjct: 65 QPFKKDFYAPHVDTVSRSPDEVNLYRVDKAITIRGANVPDPSQFFIEGNFPESVVQELKK 124
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P AIQA + +SG D V I +TGSGKTLA++LP HI Q P+ GD P+
Sbjct: 125 QGFSEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLPAAVHISNQEPLQRGD-GPIA 183
Query: 199 LVMAPTGELVRQQVRRGRM----IDLLC--------------KNGVKI------------ 228
LV+APT EL +Q +M I C +NGV+I
Sbjct: 184 LVLAPTRELAQQIQSVAKMFSSSIRNTCIFGGTPKGPQAHDLQNGVEIVIATPGRLIDFL 243
Query: 229 ----TNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR- 283
TNL RVTYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+ LA
Sbjct: 244 ERGSTNLKRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAAD 303
Query: 284 ------KTNVCNLSIA 293
+ NV +L +A
Sbjct: 304 FLVDYIQINVGSLELA 319
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD +++ VINFD PN EDYVH +S A+ F S N A D
Sbjct: 407 VATDVAARGLDVDDVKYVINFDYPNSSEDYVHRIGRTGRSKQAGIAYTFFSTNNMRQAKD 466
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+ E + VV ++L +A+
Sbjct: 467 LISILEEAHQVVPEELIEMAN 487
>gi|149065924|gb|EDM15797.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_a [Rattus
norvegicus]
gi|344257977|gb|EGW14081.1| putative ATP-dependent RNA helicase DDX17 [Cricetulus griseus]
Length = 652
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|344304120|gb|EGW34369.1| ATP-dependent RNA helicase DBP2 [Spathaspora passalidarum NRRL
Y-27907]
Length = 545
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 148/308 (48%), Gaps = 52/308 (16%)
Query: 24 NDMECSFAEHPNNCFRLGRRLPAEDSHS----ASDYELFMKRAKKKKRDKNREIIKSKIK 79
N+ + + +N +R G R + S + + + +KK D+ E++ +
Sbjct: 4 NNNSSEYRNNDHNGYRGGNRDGGYGNRSHGYQGGNRDGGFRGGYQKKFDEPIELVAPEWD 63
Query: 80 ID-YQQLRKNFYTQ----AREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
++ + KNFY + A R +R++ ++ + P PI T+ + G +L+
Sbjct: 64 LETLPKFEKNFYVEHPNVAARTDREIEEFRRKNEMSVIGNDIPHPITTFEEAGFPDYVLK 123
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+P AIQ + SG D V I TGSGKTL++ LP + HI QP + PG D
Sbjct: 124 EVIAQGFPSPTAIQCQGWPMASSGRDMVGIAATGSGKTLSYCLPAIVHINAQPLLSPG-D 182
Query: 195 SPVGLVMAPTGELVRQ---------------------------QVRR------------G 215
P+ LV+APT EL Q Q+R G
Sbjct: 183 GPIALVLAPTRELACQIQQECSKFGRSSRIRNTCVYGGAPRGPQIRDLARGVEICIATPG 242
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID+L TNL RVTYLVLDEADRM DMGFEP I +IV+ IRPDRQ +++S T+P
Sbjct: 243 RLIDMLESGK---TNLKRVTYLVLDEADRMLDMGFEPVIRKIVEQIRPDRQTLMWSATWP 299
Query: 276 PRVEILAR 283
V+ LAR
Sbjct: 300 KEVQALAR 307
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH 323
KT + +A V ARG+D K + VIN+D P + EDYVH
Sbjct: 404 KTGKSPIMVATDVAARGIDVKGITFVINYDMPGNIEDYVH 443
>gi|332231227|ref|XP_003264799.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 1
[Nomascus leucogenys]
Length = 644
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 42 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 101
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 102 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 160
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 161 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 220
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 221 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 277
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 278 QLAEDFLRDYTQINVGNLELS 298
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 386 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 445
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 446 LIKVLEEANQAINPKLMQLVD 466
>gi|410965551|ref|XP_004001562.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17 [Felis catus]
Length = 650
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|361128048|gb|EHL00001.1| putative ATP-dependent RNA helicase dbp2 [Glarea lozoyensis 74030]
Length = 625
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S A +RK+ ++ ++ P+P++T+ + G ++
Sbjct: 106 KFEKSFYKEDPLVTNRSEADVAKFRKEHNIAVQGSDVPRPVETFDEAGFPAYVMSEVKAQ 165
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 166 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 224
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 225 VLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDM 284
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 285 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRA 341
Query: 281 LA 282
LA
Sbjct: 342 LA 343
>gi|335287568|ref|XP_003126098.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Sus
scrofa]
Length = 652
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|198282005|ref|NP_001095463.1| probable ATP-dependent RNA helicase DDX17 [Bos taurus]
gi|154757449|gb|AAI51649.1| DDX17 protein [Bos taurus]
gi|296487004|tpg|DAA29117.1| TPA: DEAD box polypeptide 17 [Bos taurus]
Length = 650
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|270016294|gb|EFA12740.1| hypothetical protein TcasGA2_TC002367 [Tribolium castaneum]
Length = 668
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/284 (35%), Positives = 141/284 (49%), Gaps = 54/284 (19%)
Query: 60 KRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREI----TRMSPAYRKQLDLKIREKC 115
K+ KKK+ D+ + I+ + RKNFY + T+ ++R+ D+ +R
Sbjct: 11 KQYKKKQEDQQLINLSLWNGIELKPFRKNFYIPHNNVKNRATQDVDSFREVKDIIVRGND 70
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
P P + + I++ K P AIQ+ +++SG D V I +TGSGKTLA+
Sbjct: 71 VPSPNLCFDEGNFPEYIMQVILKQGFAEPTAIQSQGWPVVLSGRDLVGIAQTGSGKTLAY 130
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
+LP + HI Q G+ PV L++APT EL +Q
Sbjct: 131 MLPAVVHINNQQRPQRGE-GPVALILAPTRELAQQIQKVAHEFGSTTMVRNTCIFGGSPK 189
Query: 211 --QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
Q R GR+ID L K TNL R TYLVLDEADRM DMGFEPQI +
Sbjct: 190 GPQARDLERGVEIVIATPGRLIDFLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRK 246
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
I+Q IRPDRQ +++S T+P +V+ LA + N+ LS+A
Sbjct: 247 IIQQIRPDRQVLMWSATWPKQVQALAEEFLVDYIQVNIGGLSLA 290
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 275 PPRVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQS 328
P R +L+ +T ++ +A V ARGLD ++++ VINFD PN EDYVH CQ
Sbjct: 360 PERDYVLSEFRTGKSSILVATDVAARGLDVEDVKYVINFDYPNSSEDYVHRIGRTGRCQQ 419
Query: 329 WLKSCAFRFISEENAIYATDLVKAFELSELVVRDDLKAVADS 370
A+ F + N A DL+ E + V +L+ +A +
Sbjct: 420 --AGTAYAFFTSNNQRQAKDLIAVLEEAGQNVSAELRDLAQN 459
>gi|326435582|gb|EGD81152.1| ATP-dependent RNA helicase DBP2 [Salpingoeca sp. ATCC 50818]
Length = 553
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/257 (35%), Positives = 129/257 (50%), Gaps = 47/257 (18%)
Query: 71 REIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQT 126
RE+ ++I KNFY + M+ A+R + + + + P+P+ +
Sbjct: 76 RELNWAEILPTLPVFHKNFYKEHEATLNMTDSDVQAFRSESKITVHGREVPRPVTRFEHA 135
Query: 127 GLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQ 186
I++ S E P IQA + + G + + I +TGSGKTL+F+LP + HI Q
Sbjct: 136 NFPRYIMDVLSSQGFEKPTPIQAQGWPMALKGRNMIGIADTGSGKTLSFILPGIVHINHQ 195
Query: 187 PPVVPGDDSPVGLVMAPTGELVRQ---------------------------QVRR----- 214
P + PGD P+ LV+APT EL +Q Q R
Sbjct: 196 PLLKPGD-GPIVLVLAPTRELAQQIGQVAFQYGSSSRIQSTCVFGGAPRGRQARELQRGV 254
Query: 215 -------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQA 267
GR+ID L +NG TNL R TYLVLDEADRM DMGFEPQ+ +IV IRPDRQ
Sbjct: 255 EILIATPGRLIDFL-ENGT--TNLKRCTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQT 311
Query: 268 VLFSPTFPPRVEILARK 284
+++S T+P V+ LA +
Sbjct: 312 LMWSATWPKEVQSLAHE 328
>gi|327302680|ref|XP_003236032.1| ATP-dependent RNA helicase DBP2 [Trichophyton rubrum CBS 118892]
gi|326461374|gb|EGD86827.1| ATP-dependent RNA helicase DBP2 [Trichophyton rubrum CBS 118892]
Length = 538
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +++ S A+RK+ ++ + K P+P++T+ + G ++
Sbjct: 81 KFEKSFYKEHPDVSARSTQEVEAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQ 140
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 141 GFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 199
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 200 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLTRGVEVCIATPGRLIDM 259
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 260 LESGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKDVRQ 316
Query: 281 LA 282
LA
Sbjct: 317 LA 318
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N D PN+ EDYVH ++ A +
Sbjct: 416 KTGKSPIMVATDVASRGIDVRDITHVLNHDYPNNSEDYVHRIGRTGRAGANGTAITLFTT 475
Query: 341 ENAIYATDLVKAFELSE 357
ENA A DLVK S+
Sbjct: 476 ENAKQARDLVKILTESK 492
>gi|444717657|gb|ELW58482.1| putative ATP-dependent RNA helicase DDX17 [Tupaia chinensis]
Length = 653
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 51 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 110
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 111 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 169
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 170 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 229
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 230 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 286
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 287 QLAEDFLRDYTQINVGNLELS 307
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 395 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 454
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 455 LIKVLEEANQAINPKLMQLVD 475
>gi|395819770|ref|XP_003783252.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Otolemur
garnettii]
Length = 652
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|351699283|gb|EHB02202.1| Putative ATP-dependent RNA helicase DDX17 [Heterocephalus glaber]
Length = 650
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|32880087|gb|AAP88874.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 17, 72kDa [synthetic
construct]
gi|61372130|gb|AAX43789.1| DEAD box polypeptide 17 [synthetic construct]
gi|61372139|gb|AAX43790.1| DEAD box polypeptide 17 [synthetic construct]
Length = 651
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|312376779|gb|EFR23772.1| hypothetical protein AND_12284 [Anopheles darlingi]
Length = 1243
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/249 (36%), Positives = 131/249 (52%), Gaps = 47/249 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+++ + +KNF+ A + S A Y + ++ + K P PI ++++G +L+
Sbjct: 34 QLNLEAFQKNFFQPASSVLNRSRAEVNQYLDKNEITVIGKNVPSPILHFQESGFPQFMLD 93
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
++ P IQA ++ +SG D V I +TGSGKTLA++LP L HI QP + G D
Sbjct: 94 EIARQGFLEPTFIQAVGWSIAMSGRDMVGIAKTGSGKTLAYILPALVHISNQPRLARG-D 152
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ LV+APT EL +Q +RR G
Sbjct: 153 GPIALVLAPTRELAQQIKQVSDDFGRRMGVHNTCVFGGAAKYPQENDLRRGVEIVIATPG 212
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID L + + TNL R TYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P
Sbjct: 213 RLIDFLER---ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQVLMWSATWP 269
Query: 276 PRVEILARK 284
+ LA +
Sbjct: 270 KEIRKLAEE 278
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 305 ELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATDLVKAFELSELVVR 361
+++ VINFD PN+ EDYVH +S K ++ F + NA A+DL+ + + +
Sbjct: 389 DVKFVINFDFPNNTEDYVHRIGRTGRSTNKGTSYTFFTPANASKASDLIAVLQDANQYIN 448
Query: 362 DDLKAVADS 370
+L A S
Sbjct: 449 PELHEYARS 457
>gi|282158103|ref|NP_001164095.1| ATP-dependent RNA helicase p62 [Tribolium castaneum]
Length = 549
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 123/242 (50%), Gaps = 48/242 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + S YR+ ++ I + AP PI+ + + + K
Sbjct: 74 FKKDFYVPHPAVANRSKYEVEQYRRSKEITI-DGDAPNPIQNFEEACFPDYVQHEIQKQG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
++ P AIQA + +SG D V I +TGSGKTLA++LP + HI QP + GD P+ LV
Sbjct: 133 YDTPTAIQAQGWPIAMSGKDLVGIAQTGSGKTLAYILPAIVHINNQPSIARGD-GPIALV 191
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q R GR+ID L
Sbjct: 192 LAPTRELAQQIQQVAHDFGSSSYVRNTCIFGGAPKGPQARDLERGVEICIATPGRLIDFL 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 252 EKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRKL 308
Query: 282 AR 283
A+
Sbjct: 309 AQ 310
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V ARGLD + ++ VIN+D PN EDY+H +S ++ F + N A D
Sbjct: 417 IATDVAARGLDVEGIKYVINYDYPNSSEDYIHRIGRTGRSDTTGTSYAFFTPSNFRQAKD 476
Query: 349 LVKAFELSELVVRDDLKAVAD 369
LV + + + L +A+
Sbjct: 477 LVSVLKEANQAINPRLSEMAN 497
>gi|390458842|ref|XP_002743821.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Callithrix
jacchus]
Length = 652
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 394 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 453
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 454 LIKVLEEANQAINPKLMQLVD 474
>gi|312373567|gb|EFR21282.1| hypothetical protein AND_17289 [Anopheles darlingi]
Length = 744
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 134/267 (50%), Gaps = 52/267 (19%)
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA------YRKQLDLKIREKCA 116
++ + KN IK + + D KNFY + + +S + Q+ LK RE
Sbjct: 57 RQSQNGKNLRNIKWEPQ-DLTPFEKNFYQPSATLVGLSETEIEGYLNKHQITLKGRE--V 113
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
P+P + GL + I+E + P AIQA + +SG D V I +TGSGKTLA++
Sbjct: 114 PRPSMDFEDGGLPSYIMEELKRQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYV 173
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+P L HI Q + GD P+ L++APT EL +Q
Sbjct: 174 VPSLVHIQHQESIRRGD-GPIALILAPTRELAQQIQQVATDFGSRVSANNTCVFGGAPKG 232
Query: 211 -QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
Q+R GR+ID L + ITNL R TYLVLDEADRM DMGFEPQI +I
Sbjct: 233 PQIRDLERGAEIVIATPGRLIDFLERG---ITNLKRCTYLVLDEADRMLDMGFEPQIRKI 289
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
+ IRPDRQ +++S T+P V LA +
Sbjct: 290 MGQIRPDRQVLMWSATWPKEVRQLAEE 316
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN+D P++ EDYVH ++ + A+ + NA A D
Sbjct: 420 VATDVAARGLDVEDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTHSNANKAND 479
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQ 381
L+ + V+ L +AK N+G G+
Sbjct: 480 LINVLREANQVINPRLVE-----LAKPNMGKGR 507
>gi|403223854|dbj|BAM41984.1| DEAD-box family RNA-dependent helicase [Theileria orientalis strain
Shintoku]
Length = 587
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/243 (37%), Positives = 124/243 (51%), Gaps = 48/243 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLDLKI-REKCAPKPIKTWRQTGLTTKILE 134
++ + KNFY + ++ ++ A R Q ++ + K P P+ + QT IL
Sbjct: 104 VELVKFEKNFYVEHPDVKALTWKDAEAIRSQKEITVVSGKDVPNPVVKFEQTSFPKYILS 163
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+ + + P IQ + + +SG D + I ETGSGKTLAFLLP + HI Q + PG D
Sbjct: 164 SIEQAGFKEPTPIQVQSWPVALSGRDMIGIAETGSGKTLAFLLPAIVHINAQSLLRPG-D 222
Query: 195 SPVGLVMAPTGELVRQ------------------------------QVRR---------G 215
P+ LV+APT EL Q ++R G
Sbjct: 223 GPIVLVLAPTRELAEQIKDTAVTFGKSSKIKTSVAYGGVPKKLQIINLKRGVEILIACPG 282
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID L + ITNL RVTYLVLDEADRM DMGFEPQI +I IRPDRQ ++FS T+P
Sbjct: 283 RLIDFLENH---ITNLKRVTYLVLDEADRMLDMGFEPQIRKITSQIRPDRQTLMFSATWP 339
Query: 276 PRV 278
V
Sbjct: 340 KEV 342
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ IA V +RGLD +++ VIN+D P EDYVH ++ +K ++ F++ + A
Sbjct: 449 IMIATDVASRGLDVHDVKYVINYDFPAQIEDYVHRIGRTGRAGMKGSSYTFLTADKFKVA 508
Query: 347 TDLVKAFELSELVVRDDLKAVAD 369
DLVK + V ++L+ +A+
Sbjct: 509 RDLVKLLREANQPVPEELQKLAN 531
>gi|332020302|gb|EGI60733.1| Putative ATP-dependent RNA helicase DDX5 [Acromyrmex echinatior]
Length = 570
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 124/245 (50%), Gaps = 49/245 (20%)
Query: 84 QLRKNFY-----TQAREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q RK+FY AR I + AYR ++ ++ P P + + G +L +
Sbjct: 73 QFRKDFYQPHPNVMARSIHAVE-AYRSNKEITVKGANVPGPNIYFEEGGFPDYVLNEIRR 131
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
P AIQA + +SG D V I +TGSGKTLA++LP + HI QP + +D P+
Sbjct: 132 QGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPRL-SRNDGPIA 190
Query: 199 LVMAPTGELVRQ------------QVRR---------------------------GRMID 219
L++APT EL +Q QVR GR+ID
Sbjct: 191 LILAPTRELAQQIQQVASDFGMSSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRLID 250
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L + TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V
Sbjct: 251 FLERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVR 307
Query: 280 ILARK 284
LA +
Sbjct: 308 NLAEE 312
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN D P++ EDYVH +S A+ F + NA A D
Sbjct: 416 VATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKAGD 475
Query: 349 LVKAFELSELVVRDDL 364
L++ E ++ VV L
Sbjct: 476 LIQVLEEAKQVVNPKL 491
>gi|384251995|gb|EIE25472.1| DEAD-box RNA helicase [Coccomyxa subellipsoidea C-169]
Length = 461
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/242 (39%), Positives = 122/242 (50%), Gaps = 49/242 (20%)
Query: 85 LRKNFYT-----QAREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY Q+R + + AYR ++ I PKP+ T+ + +L
Sbjct: 3 FEKNFYVEHPAVQSRSLEEVK-AYRHAREIHIDGHDIPKPVTTFEEASFPEYVLTEVKHA 61
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQA + + G D V + ETGSGKTLA+LLP + HI QP + PG D P+ L
Sbjct: 62 GFTQPTPIQAQGWPMALLGRDLVGLAETGSGKTLAYLLPAIVHINAQPYLEPG-DGPIVL 120
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 121 VLAPTRELAVQIQQECAKFGTSSRIKNTCVYGGAPKGPQMRDLRNGVEIVIATPGRLIDM 180
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L ++TNL RVTYLVLDEADRM DMGFEPQI IV IRPDRQ +L+S T+P V+
Sbjct: 181 LES---RVTNLRRVTYLVLDEADRMLDMGFEPQIRNIVSQIRPDRQTLLWSATWPKDVQS 237
Query: 281 LA 282
+A
Sbjct: 238 IA 239
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ +A V ARGLD K++++V+N+D PN EDYVH ++ A F + N A
Sbjct: 341 IMLATDVAARGLDVKDIKMVVNYDMPNTAEDYVHRIGRTARAGASGLAVSFFTSANGRMA 400
Query: 347 TDLVKAFELSELVVRDDLKAVA 368
+V + V D L+ A
Sbjct: 401 RQIVDILSEAHQTVPDQLRQYA 422
>gi|367026670|ref|XP_003662619.1| hypothetical protein MYCTH_2303449 [Myceliophthora thermophila ATCC
42464]
gi|347009888|gb|AEO57374.1| hypothetical protein MYCTH_2303449 [Myceliophthora thermophila ATCC
42464]
Length = 552
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 122/242 (50%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + + S A +R+ + + + PKP++T+ + G +++
Sbjct: 86 KFEKSFYREHPNVAARSAAEVEKFRRDHAITVSGRDVPKPVETFDEAGFPRYVMDEVKAQ 145
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQA + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 146 GFPAPTAIQAQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 204
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 205 VLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGPQIRDLQRGVEVCIATPGRLIDM 264
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++S T+P V
Sbjct: 265 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTCMWSATWPKEVRA 321
Query: 281 LA 282
LA
Sbjct: 322 LA 323
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 423 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGIAITFFTT 482
Query: 341 ENAIYATDLVKAFE 354
+NA A DLV +
Sbjct: 483 DNAKQARDLVSVLQ 496
>gi|219110339|ref|XP_002176921.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411456|gb|EEC51384.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 529
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/247 (37%), Positives = 126/247 (51%), Gaps = 47/247 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
K + Q K+FY + ++ S A+R + +R PKP+ T+ + + +L
Sbjct: 84 KTELVQFEKDFYIEHPDVRARSDQEADAWRASKQIVVRGHDVPKPVMTFDEASMPEYVLN 143
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ+ + + G + V ++ TGSGKTLAFLLP + HI QP + PG D
Sbjct: 144 EVLKCGFDKPTPIQSQGWPMALKGRNMVGVSATGSGKTLAFLLPAMIHINAQPYLKPG-D 202
Query: 195 SPVGLVMAPTGELVRQ---------------------------QVRR------------G 215
P+ LV+APT EL Q Q+R G
Sbjct: 203 GPIVLVLAPTRELAVQIKEECDKFGSSSEIKNTVVYGGVKKHTQLRELRAGAEICIATPG 262
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID L + TNL RVTYLVLDEADRM DMGFEPQ+ +IV IRPDRQ +++S T+P
Sbjct: 263 RLIDHLEQGN---TNLKRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQVLMWSATWP 319
Query: 276 PRVEILA 282
V+ LA
Sbjct: 320 KEVQALA 326
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK-----SCAFRFISEENA 343
L +A V ARGLD ++ +V+NFD P + + Y+H ++ + +F F+ ++NA
Sbjct: 428 TLLVATDVAARGLDVDDIRIVVNFDFPKEMDSYIHRVGRTGRAGKKGFAVSF-FVPDKNA 486
Query: 344 IYATDLVKAFELSELVVRDDLKAV 367
A +LV + V +L+A+
Sbjct: 487 RLARELVDILNRTSQNVPQELQAL 510
>gi|270016295|gb|EFA12741.1| Rm62 [Tribolium castaneum]
Length = 776
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 123/242 (50%), Gaps = 48/242 (19%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + S YR+ ++ I + AP PI+ + + + K
Sbjct: 88 FKKDFYVPHPAVANRSKYEVEQYRRSKEITI-DGDAPNPIQNFEEACFPDYVQHEIQKQG 146
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
++ P AIQA + +SG D V I +TGSGKTLA++LP + HI QP + GD P+ LV
Sbjct: 147 YDTPTAIQAQGWPIAMSGKDLVGIAQTGSGKTLAYILPAIVHINNQPSIARGD-GPIALV 205
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q R GR+ID L
Sbjct: 206 LAPTRELAQQIQQVAHDFGSSSYVRNTCIFGGAPKGPQARDLERGVEICIATPGRLIDFL 265
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 266 EKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRKL 322
Query: 282 AR 283
A+
Sbjct: 323 AQ 324
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V ARGLD + ++ VIN+D PN EDY+H +S ++ F + N A D
Sbjct: 431 IATDVAARGLDVEGIKYVINYDYPNSSEDYIHRIGRTGRSDTTGTSYAFFTPSNFRQAKD 490
Query: 349 LV 350
LV
Sbjct: 491 LV 492
>gi|307202009|gb|EFN81574.1| Probable ATP-dependent RNA helicase DDX17 [Harpegnathos saltator]
Length = 724
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 137/280 (48%), Gaps = 60/280 (21%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
++KN Y + +P Y ++ ++ P PI+ + ++ ++E K
Sbjct: 68 IKKNLYAPHINVLNRTPDEINKYHAGKEITVKGNNTPSPIQAFEESNFPDYVMEEIRKQG 127
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQA + +SG D V I +TGSGKTLA++LP HI QP + GD P+ L+
Sbjct: 128 FAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPATVHINHQPRLSRGD-GPIVLI 186
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q R GR+ID L
Sbjct: 187 LAPTRELAQQIQTVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPGRLIDFL 246
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+ L
Sbjct: 247 EKG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQAL 303
Query: 282 AR-------KTNVCNLSIANSVRARGL------DEKELEL 308
A + N+ +L++A + R + EKE +L
Sbjct: 304 AEDFLTDYIQINIGSLTLAANHNIRQIVEICQEHEKETKL 343
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 8/102 (7%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEENAIYA 346
+A V ARGLD ++++ VINFD PN EDY+H CQS A+ + + NA A
Sbjct: 410 VATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCQS--AGTAYAYFTPNNARQA 467
Query: 347 TDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQ-VHGTGH 387
+L+ E + + L +A+S + G + HG G+
Sbjct: 468 KELIAVLEEAGQAINPQLADMANSIRNQYGKGRQRWSHGRGN 509
>gi|71029108|ref|XP_764197.1| RNA helicase [Theileria parva strain Muguga]
gi|68351151|gb|EAN31914.1| RNA helicase, putative [Theileria parva]
Length = 635
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 127/249 (51%), Gaps = 48/249 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKI-REKCAPKPIKTWRQTGLTTKIL 133
+I+ + KNFY + E+ M+ R+ ++ + + PKP+ + T IL
Sbjct: 163 QIELVKFEKNFYVEHPEVKAMTQQEADEIRRAKEITVVHGRDVPKPVVKFEYTSFPRYIL 222
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ + P IQ + + +SG D + I ETGSGKTLAFLLP + HI Q + PGD
Sbjct: 223 SSIEAAGFKEPTPIQVQSWPIALSGRDMIGIAETGSGKTLAFLLPAIVHINAQALLRPGD 282
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRRG-------- 215
P+ LV+APT EL Q +RRG
Sbjct: 283 -GPIVLVLAPTRELAEQIKETALVFGRSSKLKTSVAYGGVPKRFQTIALRRGVEILIACP 341
Query: 216 -RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
R+ID L + +TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ ++FS T+
Sbjct: 342 GRLIDFLESS---VTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATW 398
Query: 275 PPRVEILAR 283
P V L+R
Sbjct: 399 PKEVIALSR 407
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + IA V +RGLD ++++ VIN+D P EDYVH ++ +K ++ F++
Sbjct: 503 KSGKHPIMIATDVASRGLDVRDVKYVINYDFPGQIEDYVHRIGRTGRAGMKGSSYTFLTP 562
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVAD 369
+ A +LVK + + +L+ +A+
Sbjct: 563 DKFKSARELVKLMREANQEIPPELQKLAN 591
>gi|387542724|gb|AFJ71989.1| putative ATP-dependent RNA helicase DDX17 isoform 3 [Macaca
mulatta]
Length = 731
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 129 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 188
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 189 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 247
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 248 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 307
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 308 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 364
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 365 QLAEDFLRDYTQINVGNLELS 385
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 533 LIKVLEEANQAINPKLMQLVD 553
>gi|387540018|gb|AFJ70636.1| putative ATP-dependent RNA helicase DDX17 isoform 1 [Macaca
mulatta]
Length = 729
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 129 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 188
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 189 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 247
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 248 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 307
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 308 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 364
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 365 QLAEDFLRDYTQINVGNLELS 385
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 533 LIKVLEEANQAINPKLMQLVD 553
>gi|326479821|gb|EGE03831.1| ATP-dependent RNA helicase DBP2 [Trichophyton equinum CBS 127.97]
Length = 536
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +++ S A+RK+ ++ + K P+P++T+ + G ++
Sbjct: 79 KFEKSFYKEHPDVSARSTQEVEAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQ 138
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 139 GFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 197
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 198 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLTRGVEVCIATPGRLIDM 257
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 258 LESGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKDVRQ 314
Query: 281 LA 282
LA
Sbjct: 315 LA 316
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N D PN+ EDYVH ++ A +
Sbjct: 414 KTGKSPIMVATDVASRGIDVRDITHVLNHDYPNNSEDYVHRIGRTGRAGANGTAITLFTT 473
Query: 341 ENAIYATDLVKAFELSE 357
ENA A DLVK S+
Sbjct: 474 ENAKQARDLVKILTESK 490
>gi|148613856|ref|NP_001091974.1| probable ATP-dependent RNA helicase DDX17 isoform 3 [Homo sapiens]
Length = 731
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 129 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 188
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 189 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 247
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 248 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 307
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 308 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 364
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 365 QLAEDFLRDYTQINVGNLELS 385
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 533 LIKVLEEANQAINPKLMQLVD 553
>gi|38201710|ref|NP_006377.2| probable ATP-dependent RNA helicase DDX17 isoform 1 [Homo sapiens]
gi|380865374|sp|Q92841.2|DDX17_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX17; AltName:
Full=DEAD box protein 17; AltName: Full=DEAD box protein
p72; AltName: Full=RNA-dependent helicase p72
gi|110611789|gb|AAH00595.2| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Homo sapiens]
Length = 729
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 129 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 188
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 189 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 247
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 248 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 307
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 308 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 364
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 365 QLAEDFLRDYTQINVGNLELS 385
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 533 LIKVLEEANQAINPKLMQLVD 553
>gi|441617835|ref|XP_004088478.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 isoform 2
[Nomascus leucogenys]
Length = 420
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 42 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 101
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 102 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 160
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 161 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 220
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 221 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 277
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 278 QLAEDFLRDYTQINVGNLELS 298
>gi|408400620|gb|EKJ79698.1| hypothetical protein FPSE_00152 [Fusarium pseudograminearum CS3096]
Length = 558
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S A+R++ + I PKP++T+ + G +++
Sbjct: 96 KFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQ 155
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 156 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPG-DGPIVL 214
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 215 VLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 274
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 275 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRA 331
Query: 281 LA 282
LA
Sbjct: 332 LA 333
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ A +
Sbjct: 431 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTT 490
Query: 341 ENAIYATDLVKAFE 354
+N A DLV +
Sbjct: 491 DNQKQARDLVNVLQ 504
>gi|355784988|gb|EHH65839.1| hypothetical protein EGM_02689, partial [Macaca fascicularis]
Length = 731
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 129 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 188
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 189 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 247
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 248 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 307
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 308 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 364
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 365 QLAEDFLRDYTQINVGNLELS 385
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 533 LIKVLEEANQAINPKLMQLVD 553
>gi|164424171|ref|XP_962960.2| ATP-dependent RNA helicase dbp-2 [Neurospora crassa OR74A]
gi|157070404|gb|EAA33724.2| ATP-dependent RNA helicase dbp-2 [Neurospora crassa OR74A]
Length = 546
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + + SPA +R + + PKP++T+ + G +++
Sbjct: 75 KFEKSFYQEHPSVANRSPAEVDKFRADHSIAVFGNNVPKPVETFDEAGFPRYVMDEVKAQ 134
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 135 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 193
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 194 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 253
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 254 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRN 310
Query: 281 LA 282
LA
Sbjct: 311 LA 312
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 412 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 471
Query: 341 ENAIYATDLVKAFE 354
+N+ A +LV +
Sbjct: 472 DNSKQARELVGVLQ 485
>gi|452821541|gb|EME28570.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 540
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 132/244 (54%), Gaps = 47/244 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++++ S A +R++ ++ + P+P+ ++ + +LE +
Sbjct: 83 KFEKNFYVEHPQVSKRSEAEVRAFREEQEITTEGENVPRPVVSFEEASFPDYVLEQIRRC 142
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P AIQA A + + G D +A+ ETGSGKT +LLP + HI QP + PG D P+ L
Sbjct: 143 GFKAPTAIQAQAWPIALKGRDLIAVAETGSGKTCGYLLPAIVHINAQPYLSPG-DGPIVL 201
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
V+APT EL ++Q+ R GR+ID
Sbjct: 202 VLAPTRELAVQIQQEATRFGASSRIKNTCVYGGVSRGPQARDLSRGVEIVIATPGRLIDF 261
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L ++G TNL RVTY+VLDEADRM DMGFEPQ+ +I+ +RPDRQ ++F+ T+P V
Sbjct: 262 L-ESGR--TNLKRVTYVVLDEADRMLDMGFEPQLRQIISQVRPDRQTLMFTATWPKEVRE 318
Query: 281 LARK 284
+A +
Sbjct: 319 IAHE 322
>gi|238615138|ref|XP_002398810.1| hypothetical protein MPER_00506 [Moniliophthora perniciosa FA553]
gi|215476192|gb|EEB99740.1| hypothetical protein MPER_00506 [Moniliophthora perniciosa FA553]
Length = 195
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 110/194 (56%), Gaps = 42/194 (21%)
Query: 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR- 214
+SG D + + +TGSGKT+AFLLP+ RHI +Q P+ P + P+ +VM PT EL Q R
Sbjct: 1 MSGRDVIGVAKTGSGKTIAFLLPLFRHIKDQRPLEPME-GPIAIVMTPTRELAVQIHREC 59
Query: 215 --------------------------------------GRMIDLLCKNGVKITNLTRVTY 236
GRMIDLL N ++TNL RVTY
Sbjct: 60 KPFLKVLNLRAVCAYGGSPIKDQIAELKKGAEIIVCTPGRMIDLLTANSGRVTNLKRVTY 119
Query: 237 LVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSV 296
+VLDEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TFP +++ LARK L I +V
Sbjct: 120 VVLDEADRMFDMGFEPQVMKIINNIRPDRQTVLFSATFPKQMDSLARKILRKPLEI--TV 177
Query: 297 RARGLDEKELELVI 310
R + E+E ++
Sbjct: 178 GGRSVVAAEIEQIV 191
>gi|355563672|gb|EHH20234.1| hypothetical protein EGK_03044 [Macaca mulatta]
Length = 800
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 218 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 277
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 278 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 336
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 337 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 396
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 397 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 453
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 454 QLAEDFLRDYTQINVGNLELS 474
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 302 DEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATDLVKAFELSEL 358
D ++++ VIN+D PN EDYVH +S K A+ F + N A +L+K E +
Sbjct: 552 DVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQ 611
Query: 359 VVRDDLKAVAD 369
+ L + D
Sbjct: 612 AINPKLMQLVD 622
>gi|322785598|gb|EFZ12253.1| hypothetical protein SINV_05205 [Solenopsis invicta]
Length = 725
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 138/280 (49%), Gaps = 60/280 (21%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
L+KNFY + +P Y ++ ++ P P++ + ++ ++ K
Sbjct: 69 LKKNFYDPHHNVLNRTPDEISKYYAGKEITVKGNNTPFPVQAFEESNFPDYVMNEIKKQG 128
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQA + +SG D V I +TGSGKTLA++LP + HI QP + GD P+ L+
Sbjct: 129 FAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPAIVHINNQPRLSRGD-GPIVLI 187
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q R GR+ID L
Sbjct: 188 LAPTRELAQQIQTVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPGRLIDFL 247
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+ L
Sbjct: 248 EKG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQAL 304
Query: 282 AR-------KTNVCNLSIANSVRARGL------DEKELEL 308
A + N+ +L++A + R + EKE +L
Sbjct: 305 AEDFLTDYIQINIGSLTLAANHNIRQIIEICQEHEKETKL 344
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEENAIYA 346
+A V ARGLD ++++ VINFD PN EDY+H CQS A+ + + NA A
Sbjct: 410 VATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCQS--AGTAYAYFTPNNARQA 467
Query: 347 TDLVKAFELSELVVRDDLKAVADS 370
+L+ E + + L +A+S
Sbjct: 468 KELIAVLEEAGQAINPQLAEMANS 491
>gi|301757526|ref|XP_002914626.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17-like [Ailuropoda melanoleuca]
Length = 775
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 173 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 232
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 233 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 291
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 292 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 351
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 352 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 408
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 409 QLAEDFLRDYTQINVGNLELS 429
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 517 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 576
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 577 LIKVLEEANQAINPKLMQLVD 597
>gi|429964896|gb|ELA46894.1| hypothetical protein VCUG_01592 [Vavraia culicis 'floridensis']
Length = 482
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 131/252 (51%), Gaps = 50/252 (19%)
Query: 74 IKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLT 129
+K ID++ KNFY ++ ++ M ++R++ +KI + PKPI +
Sbjct: 27 VKDNGSIDFE---KNFYRESARVSEMGDNEVNSFREKNQMKIIGEGVPKPIIGFEDVDFG 83
Query: 130 TKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPV 189
+ F K ++P+AIQA + +SG D V I +TGSGKT++F LP L H Q P+
Sbjct: 84 AGVQNYFKKKEFKSPMAIQAQGWPMALSGRDMVGIAQTGSGKTISFALPALVHAAAQEPL 143
Query: 190 VPGDDSPVGLVMAPTGELV------------------------------RQQVRR----- 214
PG D P+ L++APT EL RQ +RR
Sbjct: 144 RPG-DGPIALILAPTRELCLQIQEVVEEYDRFFKMRSLAVYGGVSAFPQRQGIRRGVEVL 202
Query: 215 ----GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLF 270
GR+IDL+ + + +L+RVTYLVLDEADRM DMGFEPQ+ I+ P+RQ +++
Sbjct: 203 VATPGRLIDLMEQGCI---HLSRVTYLVLDEADRMLDMGFEPQLRNIIPKTNPERQTLMW 259
Query: 271 SPTFPPRVEILA 282
S T+P V LA
Sbjct: 260 SATWPREVRDLA 271
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS----WLKSCAFRFIS 339
K+ N+ IA V ARGLD K+++ VINFD P + + Y+H ++ + A F +
Sbjct: 365 KSGRKNILIATDVAARGLDVKDVQAVINFDFPPNCDSYIHRIGRTARGNQKEGLAIAFFT 424
Query: 340 EENAIYATDLVKAFELSELVVRDDLKAV 367
+E+ A +LV + + V DDL +
Sbjct: 425 QEDRGNAAELVNILKNAGQSVPDDLAQI 452
>gi|345308872|ref|XP_003428757.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX17-like [Ornithorhynchus anatinus]
Length = 842
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 129/261 (49%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 242 KFEKNFYVEHPEVARLTPYEVEELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLID 301
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
N P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 302 QNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 360
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 361 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 420
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 421 FLESGK---TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 477
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 478 QLAEDFLREYTQINVGNLELS 498
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 586 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 645
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 646 LIKVLEEANQAINPKLMQLVD 666
>gi|5059027|gb|AAD38874.1|AF110007_1 p68 RNA helicase [Molgula oculata]
gi|5059032|gb|AAD38877.1|AF110009_1 p68 RNA helicase [Molgula oculata]
Length = 618
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 122/241 (50%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K FY ++ + +P AY + + ++ KPI + + G I T SK
Sbjct: 107 FQKEFYVESPAVANRNPVEVQAYYNEKHISVQGALVRKPIFKFEEAGFPDYIYGTLSKQG 166
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+P IQA +SG D V I +TGSGKTLAF+LP + HI QP + PG D P+ LV
Sbjct: 167 FSDPTPIQAIGWPNAMSGHDCVGIAKTGSGKTLAFILPAIVHINAQPYLDPG-DGPIVLV 225
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+ PT EL +Q Q+R GR+ID L
Sbjct: 226 LCPTRELAQQVQQVAAEFGSSSHIKNTCVYGGASKGPQLRDLERGCEIVIATPGRLIDFL 285
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ K TNL R TYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V L
Sbjct: 286 EQ---KKTNLRRCTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMWSATWPKEVSKL 342
Query: 282 A 282
A
Sbjct: 343 A 343
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V +RGLD +++ VIN+D P+ EDYVH ++ K A+ F + +NA A D
Sbjct: 449 VATDVASRGLDVSDVKFVINYDFPSQCEDYVHRIGRTARAEQKGTAYTFFTYDNAKQAKD 508
Query: 349 LVKAFELSELVVRDDLKAVADSF 371
L+ + ++ V L + +F
Sbjct: 509 LIAILQEAKQAVNPKLMELGMTF 531
>gi|426227120|ref|XP_004007674.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Ovis aries]
Length = 774
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 172 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 231
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 232 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 290
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 291 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 350
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 351 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 407
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 408 QLAEDFLRDYTQINVGNLELS 428
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 516 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 575
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 576 LIKVLEEANQAINPKLMQLVD 596
>gi|46116580|ref|XP_384308.1| hypothetical protein FG04132.1 [Gibberella zeae PH-1]
gi|91206540|sp|Q4IF76.1|DBP2_GIBZE RecName: Full=ATP-dependent RNA helicase DBP2
Length = 555
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S A+R++ + I PKP++T+ + G +++
Sbjct: 93 KFEKSFYKEHPDVETRSDADVEAFRRKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQ 152
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 153 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPG-DGPIVL 211
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 212 VLAPTRELAVQIQEEMKKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 271
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 272 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRA 328
Query: 281 LA 282
LA
Sbjct: 329 LA 330
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC---AFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ A +
Sbjct: 428 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTT 487
Query: 341 ENAIYATDLVKAFE 354
+N A DLV +
Sbjct: 488 DNQKQARDLVNVLQ 501
>gi|440903013|gb|ELR53727.1| Putative ATP-dependent RNA helicase DDX17, partial [Bos grunniens
mutus]
Length = 731
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 129 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 188
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 189 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 247
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 248 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 307
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 308 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 364
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 365 QLAEDFLRDYTQINVGNLELS 385
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 473 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 532
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 533 LIKVLEEANQAINPKLMQLVD 553
>gi|258577027|ref|XP_002542695.1| ATP-dependent RNA helicase p62 [Uncinocarpus reesii 1704]
gi|237902961|gb|EEP77362.1| ATP-dependent RNA helicase p62 [Uncinocarpus reesii 1704]
Length = 1336
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 122/243 (50%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +T S A+RK ++ + K P+P++++ + G ++
Sbjct: 878 KFEKHFYKENPIVTNRSTQEVDAFRKTHEMTVYGKNVPRPVESFDEAGFPQYVISEVKAQ 937
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 938 GFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 996
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 997 VLAPTRELAVQIQTEITKFGKSSRIRNTCVYGGVPRGPQIRDLARGVEVCIATPGRLIDM 1056
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 1057 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 1113
Query: 281 LAR 283
LA
Sbjct: 1114 LAH 1116
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D +++ V+N+D PN+ EDYVH ++ A +
Sbjct: 1213 KTGKSPIMVATDVASRGIDVRDITHVLNYDYPNNSEDYVHRIGRTGRAGANGTAITLFTT 1272
Query: 341 ENAIYATDLV 350
+NA A DLV
Sbjct: 1273 DNAKQARDLV 1282
>gi|355683242|gb|AER97060.1| DEAD box polypeptide 17 [Mustela putorius furo]
Length = 730
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 131 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 190
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 191 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 249
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 250 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 309
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 310 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 366
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 367 QLAEDFLRDYTQINVGNLELS 387
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 475 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 534
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 535 LIKVLEEANQAINPKLMQLVD 555
>gi|345493218|ref|XP_001605403.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Nasonia
vitripennis]
Length = 574
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/241 (36%), Positives = 125/241 (51%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + P YR + ++ ++ K P P+ T+ + G ++ + N
Sbjct: 69 FKKDFYVPCDSVQNRDPRSVEQYRSEKEITLKGKGIPNPVFTFEEAGFPEYVMREIKRQN 128
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P +IQA + +SG D V I TGSGKTL+++LP + HI QP + D P+ LV
Sbjct: 129 FKEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPKLC-RKDGPIALV 187
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q R GR++D L
Sbjct: 188 LAPTRELAQQIQQVADDFGHSSGIKNTCLYGGAPKGSQARDLDNGVEIVIATPGRLLDFL 247
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
++G TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+ L
Sbjct: 248 -ESGR--TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 304
Query: 282 A 282
A
Sbjct: 305 A 305
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD ++++ VINFD P+ EDYVH ++ + A+ F + NA A D
Sbjct: 411 VATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPSNAGKAND 470
Query: 349 LVKAFELSELVVRDDLKAVAD 369
LV+ + + V+ L +AD
Sbjct: 471 LVQVLKEANQVINPKLLELAD 491
>gi|400599489|gb|EJP67186.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 568
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 123/242 (50%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY ++ S A+R + + I PKP++T+ + G +++
Sbjct: 108 KFEKDFYKVNSDVENRSDAEVQAFRTKHQMTIAGNNVPKPVETFDEAGFPRYVMDEVKAQ 167
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 168 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 226
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 227 VLAPTRELAVQIQQEITKFGRSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 286
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 287 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVRA 343
Query: 281 LA 282
+A
Sbjct: 344 MA 345
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
KTN + +A V +RG+D + + V+N+D PN+ EDY+H ++ A F +
Sbjct: 443 KTNKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGANGTAITFFTT 502
Query: 341 ENAIYATDLVKAFE 354
+N A +LV +
Sbjct: 503 DNQKQARELVNVLQ 516
>gi|147904944|ref|NP_001086205.1| MGC84147 protein [Xenopus laevis]
gi|49522819|gb|AAH74323.1| MGC84147 protein [Xenopus laevis]
Length = 450
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 122/239 (51%), Gaps = 47/239 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+I+Y KNFY + EIT +P R +L+L++ AP+ ++ G +++
Sbjct: 205 EIEYPPFEKNFYEEHEEITSQTPQQITELRHKLNLRVSGAAAPRLCSSFAHFGFDEQLMH 264
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ P+L HI +Q + PG D
Sbjct: 265 QIRKSEYTKPTPIQCQGIPVALSGRDMIGIAKTGSGKTAAFIWPILVHIMDQKELQPG-D 323
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 324 GPIAVIVCPTRELCQQIHNECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 383
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
R+ID + K K TNL RVTYLV DEADRMFDMGFE Q+ + ++RPDRQ +LFS TF
Sbjct: 384 RLIDHVKK---KATNLQRVTYLVFDEADRMFDMGFEYQVRSVANHVRPDRQTLLFSATF 439
>gi|62088770|dbj|BAD92832.1| DEAD box polypeptide 17 isoform p82 variant [Homo sapiens]
Length = 737
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 131 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 190
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 191 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 249
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 250 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 309
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 310 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 366
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 367 QLAEDFLRDYTQINVGNLELS 387
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 475 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 534
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 535 LIKVLEEANQAINPKLMQLVD 555
>gi|218681960|pdb|3FE2|A Chain A, Human Dead-Box Rna Helicase Ddx5 (P68), Conserved Domain I
In Complex With Adp
gi|218681961|pdb|3FE2|B Chain B, Human Dead-Box Rna Helicase Ddx5 (P68), Conserved Domain I
In Complex With Adp
Length = 242
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 45/220 (20%)
Query: 103 YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
YR+ ++ +R PKP+ + + +++ ++ N P AIQA + +SGLD V
Sbjct: 11 YRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMV 70
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
+ +TGSGKTL++LLP + HI QP + G D P+ LV+APT EL +Q
Sbjct: 71 GVAQTGSGKTLSYLLPAIVHINHQPFLERG-DGPICLVLAPTRELAQQVQQVAAEYCRAC 129
Query: 211 ---------------QVRR------------GRMIDLL-CKNGVKITNLTRVTYLVLDEA 242
Q+R GR+ID L C TNL R TYLVLDEA
Sbjct: 130 RLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGK----TNLRRTTYLVLDEA 185
Query: 243 DRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILA 282
DRM DMGFEPQI +IV IRPDRQ +++S T+P V LA
Sbjct: 186 DRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLA 225
>gi|452839385|gb|EME41324.1| hypothetical protein DOTSEDRAFT_73654 [Dothistroma septosporum
NZE10]
Length = 551
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/239 (37%), Positives = 122/239 (51%), Gaps = 47/239 (19%)
Query: 87 KNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHE 142
K+FY +A + SPA +R+ + I+ + PKP++T+ + G ++
Sbjct: 88 KSFYKEAPTVAARSPAEVDEFRRVNQITIQGRDVPKPVETFDEAGFPNYVMSEVKAQGFP 147
Query: 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMA 202
P AIQ+ + +SG D V + ETGSGKTL + LP + HI QP + G D P+ L++A
Sbjct: 148 KPTAIQSQGWPMALSGRDVVGVAETGSGKTLTYTLPAIVHINAQPLLAQG-DGPIVLILA 206
Query: 203 PTGELVRQ---------------------------QVRR------------GRMIDLLCK 223
PT EL Q Q+R GR+ID+L
Sbjct: 207 PTRELAVQIQEEVSKFGKSSRIRNTCVYGGVPKGGQIRDLARGVEVCIATPGRLIDMLES 266
Query: 224 NGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILA 282
TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V LA
Sbjct: 267 GK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQLA 322
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISE 340
KT + +A V +RG+D K++ V N+D PN+ EDYVH ++ A +
Sbjct: 420 KTGKSPIMVATDVASRGIDVKDITHVFNYDYPNNSEDYVHRIGRTGRAGRLGTAITLFTT 479
Query: 341 ENAIYATDLV 350
+N+ A +LV
Sbjct: 480 DNSKQARELV 489
>gi|320589963|gb|EFX02419.1| RNA helicase [Grosmannia clavigera kw1407]
Length = 537
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + + S A +R++ + + + PKP++T+ + G +++
Sbjct: 76 KFEKDFYKEHPTVAERSAAEVEKFRREHAMAVTGRDVPKPVETFDEAGFPRYVIDEVKAQ 135
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 136 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPSIVHINAQPLLAPG-DGPIVL 194
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 195 VLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 254
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 255 LESGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKILSQIRPDRQTLMWSATWPKEVRN 311
Query: 281 LA 282
LA
Sbjct: 312 LA 313
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + VIN+D PN+ EDY+H ++ A +
Sbjct: 413 KTGKSPIMVATDVASRGIDVRNITHVINYDYPNNSEDYIHRIGRTGRAGANGTAITLFTT 472
Query: 341 ENAIYATDLVKAFE 354
+NA A DLV +
Sbjct: 473 DNAKQARDLVSVLQ 486
>gi|291222373|ref|XP_002731189.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 670
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 129/252 (51%), Gaps = 50/252 (19%)
Query: 77 KIKIDYQQL---RKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLT 129
KIK D + L KNFY + ++ R A++ + + + + PKP+ + +
Sbjct: 69 KIKWDLESLPRFEKNFYREHPDVARREQHELEAFQNEKQITTKGRGVPKPVFHFGECSFP 128
Query: 130 TKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPV 189
IL T + N + P AIQA + ++G D V I +TGSGKT+A++LP + HI QP +
Sbjct: 129 DYILATVKRNNFKEPTAIQAQGWPMALTGRDVVGIAQTGSGKTIAYMLPAIVHINHQPFL 188
Query: 190 VPGDDSPVGLVMAPTGELVRQ---------------------------QVRR-------- 214
G D P+ LV+ PT EL +Q Q+R
Sbjct: 189 DRG-DGPICLVLCPTRELAQQVAHVAVDFGKSSRIKNTCVYGGAPKGSQIRDLERGVEIC 247
Query: 215 ----GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLF 270
GR++D L TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++
Sbjct: 248 IATPGRLLDFL---EAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMW 304
Query: 271 SPTFPPRVEILA 282
S T+P V LA
Sbjct: 305 SATWPKEVRGLA 316
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V +RGLD +++ VINFD P+ EDY+H +S A+ F + N A +
Sbjct: 422 LATDVASRGLDVTDIKFVINFDYPSSTEDYIHRIGRTARSERTGTAYTFFTAGNMKQAPE 481
Query: 349 LVKAFELSELVVRDDLKAVADS 370
L+ + V+ L +A++
Sbjct: 482 LIDVLREANQVINPKLINMAEA 503
>gi|124430723|ref|NP_001037582.1| DEAD box polypeptide 5 isoform 1 [Bombyx mori]
gi|95102742|gb|ABF51312.1| DEAD box polypeptide 5 isoform 1 [Bombyx mori]
Length = 539
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 123/246 (50%), Gaps = 47/246 (19%)
Query: 80 IDYQQLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
+ Q KNFY + + SP YR ++ + PI+ + + + +
Sbjct: 62 VSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEEANFPDYVQQG 121
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
+ ++ P IQA + +SG + V + +TGSGKTLA++LP + HI QPP+ GD
Sbjct: 122 VKTMGYKEPTPIQAQGWPIAMSGKNLVGVAQTGSGKTLAYILPAIVHINNQPPIRRGD-G 180
Query: 196 PVGLVMAPTGELV---------------------------RQQVRR------------GR 216
P+ LV+APT EL R+Q R GR
Sbjct: 181 PIALVLAPTRELAQQIQQVAADFGHTSYVRNTCVFGGAPKREQARDLERGVEIVIATPGR 240
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID L K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P
Sbjct: 241 LIDFLEKG---TTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPK 297
Query: 277 RVEILA 282
V+ LA
Sbjct: 298 EVKKLA 303
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 4/97 (4%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKS 332
R E+L + K ++ +A V ARGLD ++ VINFD PN EDY+H +S K
Sbjct: 395 RDEVLYQFKEGRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKG 454
Query: 333 CAFRFISEENAIYATDLVKAFELSELVVRDDLKAVAD 369
++ F + N+ A DLV + + ++ L+++AD
Sbjct: 455 TSYAFFTPSNSRQAKDLVSVLQEANQIISPQLQSMAD 491
>gi|350424793|ref|XP_003493914.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
impatiens]
Length = 566
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 133/260 (51%), Gaps = 56/260 (21%)
Query: 85 LRKNFYT-----QAREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+K+FY Q R++ R+ YR + ++ ++ K P P+ T+ +TG +L+ +
Sbjct: 67 FKKDFYVPHEAVQNRDL-RIVEQYRSEKEITLKGKNIPNPVFTFEETGFPDYVLKEIKRQ 125
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P +IQA + +SG D V I TGSGKTL+++LP + HI QP + D P+ L
Sbjct: 126 GFTEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPK-LGRKDGPIAL 184
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL +Q Q R GR++D
Sbjct: 185 VLAPTRELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGGVEIVIATPGRLLDF 244
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+
Sbjct: 245 LESGR---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKN 301
Query: 281 LAR-------KTNVCNLSIA 293
LA + NV +L +A
Sbjct: 302 LAEDFLKDYAQINVGSLQLA 321
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD ++++ VINFD P+ EDYVH ++ + A+ F + N+ A D
Sbjct: 409 VATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKAND 468
Query: 349 LVKAFELSELVVRDDLKAVADS 370
L++ + + V+ L +ADS
Sbjct: 469 LIQVLKEANQVINPKLLELADS 490
>gi|156100409|ref|XP_001615932.1| helicase [Plasmodium vivax Sal-1]
gi|148804806|gb|EDL46205.1| helicase, putative [Plasmodium vivax]
Length = 528
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/259 (36%), Positives = 135/259 (52%), Gaps = 55/259 (21%)
Query: 75 KSKIKIDYQQLR-----KNFYTQAREITRMSPAYRKQLDLKIR-----EKCAPKPIKTWR 124
K+ ++ID+ ++ KNFY + +I+ ++ K + K R + P P+++
Sbjct: 57 KNLMQIDWTNVKLVPFEKNFYKEHDDISNLTTKEVKDIRDKHRITILEGEGVPNPVESIN 116
Query: 125 QTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIW 184
+ G +L++ N P IQ + +SG D + ETGSGKTLAF+LP HI
Sbjct: 117 KIGFPDYVLKSLKNNNIVTPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHIL 176
Query: 185 EQPPVVPGDDSPVGLVMAPTGELVRQQVRR------------------------------ 214
QP + GD P+ LVMAPT EL +Q+R+
Sbjct: 177 AQPSLKYGD-GPIVLVMAPTRELA-EQIRQECIKFSIESKIRNTCAYGGVPKSGQIYALK 234
Query: 215 ----------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPD 264
GR+IDLL +N +TNL RVTYLVLDEAD+M DMGFE QI +IV+ IRPD
Sbjct: 235 QGVHILIACPGRLIDLLEQN---VTNLMRVTYLVLDEADKMLDMGFEIQIRKIVEQIRPD 291
Query: 265 RQAVLFSPTFPPRVEILAR 283
RQ +++S T+P V+ LAR
Sbjct: 292 RQTLMWSATWPKEVQSLAR 310
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
KT + IA V +RGLD K+++ VINFD PN EDYVH ++ +F F++
Sbjct: 407 KTGKSPILIATDVASRGLDIKDVKYVINFDFPNQIEDYVHRIGRTGRAGAHGASFTFLTS 466
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN 393
+ A DLVK SE V L+ + S+ A N +G G +N
Sbjct: 467 DKYRLARDLVKILRESEQPVPPQLEKI--SYTAVNNPRRNPYYGYGRSSHNVN 517
>gi|154757438|gb|AAI51769.1| DDX17 protein [Bos taurus]
Length = 341
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
>gi|170053024|ref|XP_001862487.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
gi|167873709|gb|EDS37092.1| ATP-dependent RNA helicase p62 [Culex quinquefasciatus]
Length = 935
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 133/262 (50%), Gaps = 58/262 (22%)
Query: 85 LRKNFYT-----QAREITRMSPAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
K+FY AR + + +R+ + + + P P +T+ + ++ +K
Sbjct: 213 FEKDFYVPHPSVMARSVDEVQ-LFRENMQVTVMGNTVPHPTQTFDEGNFPEFVINEINKQ 271
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+P AIQA + +SG D V I +TGSGKTLA++LP + HI Q P+ GD P+ L
Sbjct: 272 GFPSPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYMLPAIVHIAHQKPLQRGD-GPIVL 330
Query: 200 VMAPTGELVRQ-----------------------------QVRR------------GRMI 218
V+APT EL +Q QVR GR+I
Sbjct: 331 VLAPTRELAQQIQTVVRDFGTHSKPNIRYTCIFGGALKGPQVRDLERGVEVVIATPGRLI 390
Query: 219 DLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRV 278
D L + ITNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 391 DFLERG---ITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEV 447
Query: 279 EILAR-------KTNVCNLSIA 293
+ LA + NV +L+++
Sbjct: 448 QALAEDFLHDYIQINVGSLNLS 469
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEENAIYA 346
+A V ARGLD ++++ VINFD PN EDY+H C S+ A+ F + N A
Sbjct: 557 VATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCSSF--GTAYTFFTPGNGRQA 614
Query: 347 TDLVKAFELSELVVRDDLKAVADS 370
+L+ E + +L ++A S
Sbjct: 615 RELLSVLEEAGQQPTPELISMAKS 638
>gi|350412507|ref|XP_003489671.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Bombus
impatiens]
Length = 619
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/243 (37%), Positives = 122/243 (50%), Gaps = 47/243 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
RK+FY +T S AYR ++ ++ P P + + G +L +
Sbjct: 74 FRKDFYQPHPNVTTRSSHLVEAYRSDKEITVKGTNVPGPNIFFEEGGFPDYVLNEIRRQG 133
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQA + +SG D V I +TGSGKTLA++LP + HI QP + +D P+ L+
Sbjct: 134 FGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPRLNR-NDGPIALI 192
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q QVR GR+ID L
Sbjct: 193 LAPTRELAQQIQQVASDFGISSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRLIDFL 252
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V L
Sbjct: 253 ERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRNL 309
Query: 282 ARK 284
A +
Sbjct: 310 AEE 312
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN D P++ EDYVH +S A+ F + NA A+D
Sbjct: 416 VATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKASD 475
Query: 349 LVKAFELSELVVRDDL 364
L++ E ++ VV L
Sbjct: 476 LIQVLEEAKQVVNPKL 491
>gi|303279012|ref|XP_003058799.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459959|gb|EEH57254.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 485
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 134/285 (47%), Gaps = 60/285 (21%)
Query: 81 DYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETF 136
D KNFY + +++ A +R + + + + P PI T+ + +L
Sbjct: 16 DADVFEKNFYLEHPDVSSRDAAAVASHRAKHAIAVSGRDPPSPITTFEEASFPDYVLSEL 75
Query: 137 SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSP 196
P IQ+ A ++SG D VA+ ETGSGKTL+FLLP + H+ QP + PG D P
Sbjct: 76 RAAGFPTPTPIQSQAWPTVLSGRDVVAVAETGSGKTLSFLLPAVVHVNAQPYLEPG-DGP 134
Query: 197 VGLVMAPTGELVRQ---------------------------QVRR------------GRM 217
+ LV+APT EL Q QV GR+
Sbjct: 135 IALVLAPTRELAVQIQAEAAIFGASSKIKSACVYGGAPKGPQVSALRDGVEICAATPGRL 194
Query: 218 IDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPR 277
ID + V +L RVTY VLDEADRM DMGFEPQI +I IRPDRQ +LF+ T+P
Sbjct: 195 IDFIETRAV---SLRRVTYFVLDEADRMLDMGFEPQIRKISDRIRPDRQTLLFTATWPKE 251
Query: 278 VEILAR-------------KTNVCNLSIANSVRARGLDEKELELV 309
VE +A + N++IA SV DEK +LV
Sbjct: 252 VEGVAADFLHDPVTVRVGDASLKANVNIAQSVDVMDEDEKYGKLV 296
>gi|346971073|gb|EGY14525.1| ATP-dependent RNA helicase DBP2 [Verticillium dahliae VdLs.17]
Length = 581
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 123/242 (50%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++ S A +RK+ + I PKP++T+ + +++
Sbjct: 98 KFEKSFYKEHPDVAARSDAEVESFRKKHQMTIAGNNIPKPVETFDEANFPRYVIDEVKAQ 157
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 158 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 216
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 217 VLAPTRELAVQIQQEIAKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 276
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPD+Q V++S T+P V
Sbjct: 277 LEAGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDKQTVMWSATWPKEVRA 333
Query: 281 LA 282
LA
Sbjct: 334 LA 335
>gi|336271291|ref|XP_003350404.1| hypothetical protein SMAC_02116 [Sordaria macrospora k-hell]
Length = 602
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 129/256 (50%), Gaps = 49/256 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + + S A +R + I PKP++T+ + G +++
Sbjct: 130 KFEKSFYQEHPSVANRSAAEVDKFRADHSIAIFGNDVPKPVETFDEAGFPRYVMDEVKAQ 189
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 190 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 248
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 249 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 308
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 309 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRN 365
Query: 281 LARK--TNVCNLSIAN 294
LA TN ++I +
Sbjct: 366 LASDFLTNFIQVNIGS 381
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 467 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 526
Query: 341 ENAIYATDLVKAFE 354
+N+ A +LV +
Sbjct: 527 DNSKQARELVGVLQ 540
>gi|158300606|ref|XP_320481.4| AGAP012045-PA [Anopheles gambiae str. PEST]
gi|157013241|gb|EAA00456.4| AGAP012045-PA [Anopheles gambiae str. PEST]
Length = 910
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 147/298 (49%), Gaps = 62/298 (20%)
Query: 53 SDYELFMK--RAK---KKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AY 103
SDY F K RAK K + + ++K + + + +K+FY + + +
Sbjct: 149 SDYNGFNKDDRAKIQSLKAKYPGQNLMKPMWE-NLEPFQKDFYVPHPSVMGRAAEEVQTF 207
Query: 104 RKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVA 163
R+Q+ + + P P + + + ++ K P AIQ+ + +SG D V
Sbjct: 208 REQMQITVMGNNVPHPCQNFEEGNFPEYVMTEIKKQGFPRPTAIQSQGWPIALSGRDMVG 267
Query: 164 ITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------- 210
I +TGSGKTLA++LP L HI Q P+ G+ P+ LV+APT EL +Q
Sbjct: 268 IAQTGSGKTLAYMLPGLVHISHQKPLSRGE-GPIVLVLAPTRELAQQIQTVVRDFGNHSK 326
Query: 211 ----------------QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEA 242
QVR GR+ID L + ITNL R TYLVLDEA
Sbjct: 327 PNIRYTCVFGGALKGPQVRDLERGVEVVIATPGRLIDFLERG---ITNLRRCTYLVLDEA 383
Query: 243 DRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
DRM DMGFEPQI +IV+ IRPDRQ +++S T+P V+ LA + N+ +LS+A
Sbjct: 384 DRMLDMGFEPQIRKIVEQIRPDRQVLMWSATWPKEVQTLAEDFLRDYIQINIGSLSLA 441
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH------HCCQSWLKSCAFRFISEENAIY 345
+A V ARGLD ++++ VINFD PN EDY+H C Q A+ F + N
Sbjct: 530 VATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCSQY---GTAYTFFTPNNGRQ 586
Query: 346 ATDLVKAFE 354
A +L+ E
Sbjct: 587 ARELLSVLE 595
>gi|119580649|gb|EAW60245.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_e [Homo
sapiens]
Length = 334
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
>gi|348569510|ref|XP_003470541.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Cavia
porcellus]
Length = 407
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
>gi|119580646|gb|EAW60242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_b [Homo
sapiens]
Length = 418
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
>gi|74145393|dbj|BAE36146.1| unnamed protein product [Mus musculus]
Length = 418
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
>gi|40068491|ref|NP_951061.1| probable ATP-dependent RNA helicase DDX17 isoform 2 [Mus musculus]
gi|354505333|ref|XP_003514725.1| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Cricetulus
griseus]
gi|26333513|dbj|BAC30474.1| unnamed protein product [Mus musculus]
gi|148672699|gb|EDL04646.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, isoform CRA_b [Mus
musculus]
Length = 407
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
>gi|50292193|ref|XP_448529.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661134|sp|Q6FML5.1|PRP5_CANGA RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|49527841|emb|CAG61490.1| unnamed protein product [Candida glabrata]
Length = 816
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 129/250 (51%), Gaps = 45/250 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
ID + K Y + EI + R LD +KI K P+P+ W Q G+ I+
Sbjct: 205 IDLDPISKCLYNEPEEIKSYTEDEIADLRLDLDNIKIEGKDCPRPVTKWSQLGIPYDIIR 264
Query: 135 TFSKL-NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ ++++ IQ I+SG D + I++TGSGKT+++LLPM+RH+ Q + G+
Sbjct: 265 FIKDVFSYKSLTPIQTQTIPAIMSGRDVIGISKTGSGKTISYLLPMIRHVKAQKKLRNGE 324
Query: 194 DSPVGLVMAPTGEL---VRQQVRR------------------------------------ 214
P+ ++ APT EL + ++V++
Sbjct: 325 TGPIAVIFAPTRELAVQINEEVQKLISDLDISSICCTGGSDLKKQIDKLKTGVEIAIATP 384
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR IDLL NG + + R++++V+DEADR+FD GFEPQI +++ +RPDRQ VLFS TF
Sbjct: 385 GRFIDLLSLNGGNLVSTLRISFVVMDEADRLFDFGFEPQIASVLRTVRPDRQCVLFSATF 444
Query: 275 PPRVEILARK 284
P +V A +
Sbjct: 445 PSKVSNFASR 454
>gi|194745414|ref|XP_001955183.1| GF18634 [Drosophila ananassae]
gi|190628220|gb|EDV43744.1| GF18634 [Drosophila ananassae]
Length = 704
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 130/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR + ++ +R + A PI+ + + L +
Sbjct: 219 VDFSNLAPFKKNFYQEHPNVASRSPYEVQRYRDEHEITVRGQ-AQNPIQDFTEVHLPDYV 277
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 278 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 337
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 338 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGSQMRDLQRGCEIVIAT 396
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 397 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 453
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 454 WPKEVKQLA 462
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 562 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 621
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 622 NNAKQAKALV 631
>gi|328876634|gb|EGG24997.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 806
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 129/255 (50%), Gaps = 55/255 (21%)
Query: 79 KIDYQ-----QLRKNFYTQAREITRMSP----AYRKQLDLKI---REKCAPKPIKTWRQT 126
KIDY + KNFY + E++ MS YR++ ++ + + P PI ++ +
Sbjct: 348 KIDYSTIELTKFEKNFYKEDSEVSAMSQDEVRQYREKHEITVFSAKNNDIPNPITSFGFS 407
Query: 127 GLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQ 186
+ I+ + L P +IQ + + + G D + + ETGSGKTLAFLLP + HI Q
Sbjct: 408 HFPSYIMSEIAVLGFTAPTSIQCQSWPIALKGRDMIGLAETGSGKTLAFLLPAIVHINAQ 467
Query: 187 PPVVPGDDSPVGLVMAPTGELVRQ-----------------------------QVRR--- 214
P + GD P+ LV+ PT EL Q Q R
Sbjct: 468 PYLETGD-GPIVLVLTPTRELAMQIQNECDKFGSSSKIKNCCIYGGVPKYQQAQALRSGV 526
Query: 215 -------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQA 267
GR+ID L + G TNL RVTYLVLDEADRM DMGFE QI +I+ IRPD+Q
Sbjct: 527 EIVVATPGRLIDFLERGG---TNLRRVTYLVLDEADRMLDMGFEDQIRKILGQIRPDKQT 583
Query: 268 VLFSPTFPPRVEILA 282
++FS T+P V+ LA
Sbjct: 584 LMFSATWPKSVQSLA 598
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD K+++ VIN+D PN E Y+H ++ A+ + ++ A+D
Sbjct: 702 IATDVASRGLDVKDIKYVINYDFPNTIESYIHRIGRTGRAGATGTAYTLFTLDDMRLASD 761
Query: 349 LVKAF-ELSELV 359
LV E S+ V
Sbjct: 762 LVTVLAEASQYV 773
>gi|398406623|ref|XP_003854777.1| hypothetical protein MYCGRDRAFT_36977 [Zymoseptoria tritici IPO323]
gi|339474661|gb|EGP89753.1| hypothetical protein MYCGRDRAFT_36977 [Zymoseptoria tritici IPO323]
Length = 529
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 123/242 (50%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + + S A +RK+ + I+ + PKP++T+ + G ++
Sbjct: 64 KFEKSFYKEDPAVAARSQAEVDEFRKKAQITIQGRDVPKPVETFDEAGFPNYVMSEVKAQ 123
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
+ P AIQ+ + +SG D V + ETGSGKTL + LP + HI QP + G D P+ L
Sbjct: 124 GFDKPTAIQSQGWPMSLSGRDVVGVAETGSGKTLTYTLPAIVHINAQPLLAQG-DGPIVL 182
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 183 ILAPTRELAVQIQEEVSKFGKSSRIRNTCVYGGVPKGGQIRDLSRGVEVVIATPGRLIDM 242
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 243 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTCMWSATWPKEVRQ 299
Query: 281 LA 282
LA
Sbjct: 300 LA 301
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D K++ V N+D PN+ EDYVH ++ A +
Sbjct: 399 KTGKSPIMVATDVASRGIDVKDITHVFNYDYPNNSEDYVHRIGRTGRAGRTGTAITLFTT 458
Query: 341 ENAIYATDLV 350
+N+ A DLV
Sbjct: 459 DNSKQARDLV 468
>gi|326471136|gb|EGD95145.1| ATP-dependent RNA helicase DBP2 [Trichophyton tonsurans CBS 112818]
Length = 350
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +++ S A+RK+ ++ + K P+P++T+ + G ++
Sbjct: 20 KFEKSFYKEHPDVSARSTQEVEAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQ 79
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 80 GFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 138
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 139 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLTRGVEVCIATPGRLIDM 198
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 199 LESGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKDVRQ 255
Query: 281 LA 282
LA
Sbjct: 256 LA 257
>gi|302663759|ref|XP_003023517.1| hypothetical protein TRV_02264 [Trichophyton verrucosum HKI 0517]
gi|291187520|gb|EFE42899.1| hypothetical protein TRV_02264 [Trichophyton verrucosum HKI 0517]
Length = 475
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +++ S A+RK+ ++ + K P+P++T+ + G ++
Sbjct: 79 KFEKSFYKEHPDVSARSTQEVEAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQ 138
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 139 GFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 197
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 198 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLTRGVEVCIATPGRLIDM 257
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 258 LESGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKDVRQ 314
Query: 281 LA 282
LA
Sbjct: 315 LA 316
>gi|38566035|gb|AAH62910.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 17 [Mus musculus]
Length = 407
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 50 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 109
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 110 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 168
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 169 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 228
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 229 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 285
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 286 QLAEDFLRDYTQINVGNLELS 306
>gi|66800707|ref|XP_629279.1| hypothetical protein DDB_G0293168 [Dictyostelium discoideum AX4]
gi|74896763|sp|Q54CE0.1|DDX17_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx17; AltName:
Full=DEAD box protein 17
gi|60462734|gb|EAL60936.1| hypothetical protein DDB_G0293168 [Dictyostelium discoideum AX4]
Length = 785
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 123/243 (50%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++++ + +R + ++ + P PI + Q +++
Sbjct: 343 RFEKNFYLEHPDVSKFTQEEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGA 402
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
NP IQ+ A + + G D + + +TGSGKTLAFLLP + HI QP V+ DD P+ L
Sbjct: 403 GFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQP-VLREDDGPIVL 461
Query: 200 VMAPTGELVRQ------------QVRR---------------------------GRMIDL 220
V+APT EL Q Q+ GR+ID+
Sbjct: 462 VLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDI 521
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++FS T+P V+
Sbjct: 522 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQA 578
Query: 281 LAR 283
LA
Sbjct: 579 LAH 581
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 275 PPRVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWL 330
P R +L++ K + + IA V +RGLD K+++ V+N+D PN E Y+H ++
Sbjct: 666 PERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGA 725
Query: 331 KSCAFRFISEENAIYATDLVKAF---------ELSELVV 360
++ ++ +NA A +L+K ELS L V
Sbjct: 726 SGVSYSLLTTDNARLANELIKVLTEAKQKIPIELSNLSV 764
>gi|396081911|gb|AFN83525.1| DEAD box RNA helicase-like protein [Encephalitozoon romaleae
SJ-2008]
Length = 493
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 126/242 (52%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ +KNFY +A I++M+ + +RK ++ ++ P PI + G +++E +
Sbjct: 46 EFQKNFYKEAESISKMNASEVASFRKASEMVVKGMNIPHPIHKFEDVGFPHRVVEDLVRK 105
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P IQA + +SG D V I +TGSGKTL+F+LP L H +QPP+ G D P+ L
Sbjct: 106 GFEGPTPIQAQGWPMALSGRDMVGIAQTGSGKTLSFILPALVHAKDQPPLRRG-DGPIVL 164
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT ELV Q Q+R GR+IDL
Sbjct: 165 VLAPTRELVMQIKKVADEFCEMFDLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDL 224
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
+ L RVT+LVLDEADRM DMGFEPQ+ +I+ P+RQ +++S T+P V
Sbjct: 225 HEQGHAP---LGRVTFLVLDEADRMLDMGFEPQLRKIIPKTNPNRQTLMWSATWPKEVRG 281
Query: 281 LA 282
LA
Sbjct: 282 LA 283
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----KSCAFRFISEENAIYAT 347
IA V RGLD +++LVINFD P EDYVH ++ + + F + + A
Sbjct: 386 IATEVAGRGLDVNDIKLVINFDFPGSCEDYVHRIGRTARGNTKEGISHTFFTINDKGNAR 445
Query: 348 DLVKAFELSELVVRDDLK 365
+L++ + ++ VV DL+
Sbjct: 446 ELIRMLKEAKQVVPSDLE 463
>gi|302509942|ref|XP_003016931.1| hypothetical protein ARB_05225 [Arthroderma benhamiae CBS 112371]
gi|291180501|gb|EFE36286.1| hypothetical protein ARB_05225 [Arthroderma benhamiae CBS 112371]
Length = 475
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/242 (37%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + +++ S A+RK+ ++ + K P+P++T+ + G ++
Sbjct: 79 KFEKSFYKEHPDVSARSTQEVEAFRKENEMTVYGKDVPRPVQTFDEAGFPQYVMSEVKAQ 138
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 139 GFAKPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 197
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 198 VLAPTRELAVQIQAEITKFGKSSRIRNTCVYGGVPRGPQIRDLTRGVEVCIATPGRLIDM 257
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 258 LESGR---TNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTCMWSATWPKDVRQ 314
Query: 281 LA 282
LA
Sbjct: 315 LA 316
>gi|66555009|ref|XP_395774.2| PREDICTED: probable ATP-dependent RNA helicase DDX17 [Apis
mellifera]
Length = 566
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 129/259 (49%), Gaps = 54/259 (20%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + P YR + ++ ++ K P P+ T+ +TG +L+ +
Sbjct: 67 FKKDFYVPHEAVQNRDPRIVEQYRSEKEITLKGKNIPNPVFTFEETGFPDYVLKEIKRQG 126
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P +IQA + +SG D V I TGSGKTL+++LP + HI QP + D P+ LV
Sbjct: 127 FTEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPK-LGRKDGPIALV 185
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q R GR++D L
Sbjct: 186 LAPTRELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGGVEIVIATPGRLLDFL 245
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+ L
Sbjct: 246 ESGR---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 302
Query: 282 AR-------KTNVCNLSIA 293
A + NV +L +A
Sbjct: 303 AEDFLKDYAQINVGSLQLA 321
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD ++++ VINFD P+ EDYVH ++ + A+ F + N+ A D
Sbjct: 409 VATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKAND 468
Query: 349 LVKAFELSELVVRDDLKAVADS 370
L++ + + V+ L +ADS
Sbjct: 469 LIQVLKEANQVINPKLLELADS 490
>gi|321467260|gb|EFX78251.1| hypothetical protein DAPPUDRAFT_213150 [Daphnia pulex]
Length = 487
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 123/245 (50%), Gaps = 47/245 (19%)
Query: 83 QQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSK 138
Q KNFY +T S YR D+ IR + P PI ++ + ++ +
Sbjct: 18 QPFEKNFYKPHPNLTVKSVHDIEQYRASKDITIRGRDVPFPITSFDEASFPDYVMTEIRR 77
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P +IQA + +SG + V I +TGSGKTLA+ LP + HI QP + PG D P+
Sbjct: 78 QGFKEPTSIQAQGWPIALSGSNMVGIAQTGSGKTLAYTLPAIVHINHQPYLEPG-DGPIA 136
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
L++APT EL +Q Q+R GR+ID
Sbjct: 137 LILAPTRELAQQISSTAKDFGSSSRIRNTCVFGGAPKGPQLRDIERGVEIMIATPGRLID 196
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V
Sbjct: 197 FLEAGK---TNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVR 253
Query: 280 ILARK 284
LA +
Sbjct: 254 QLAEE 258
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD +++ VINFD PN EDYVH +S A+ F + N+ A D
Sbjct: 362 VATDVAARGLDVDDVKFVINFDYPNCSEDYVHRIGRTGRSQRTGTAYTFFTPNNSKQAQD 421
Query: 349 LVKAFELSELVVRDDLKAVADS 370
LV + VV L +A S
Sbjct: 422 LVNVLTEANQVVNPKLYELASS 443
>gi|195502160|ref|XP_002098101.1| GE24123 [Drosophila yakuba]
gi|194184202|gb|EDW97813.1| GE24123 [Drosophila yakuba]
Length = 719
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 130/249 (52%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +K+FY + + SP YR + ++ +R + P PI+ + + L +
Sbjct: 236 VDFSNLAPFKKDFYQEHPNVANRSPYDVQRYRDEQEITVRGQ-VPNPIQDFSEVYLPDYV 294
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 295 MKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 354
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 355 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 413
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 414 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 470
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 471 WPKEVKQLA 479
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 579 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 638
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 639 NNAKQAKALV 648
>gi|291389880|ref|XP_002711450.1| PREDICTED: DEAD box polypeptide 17 [Oryctolagus cuniculus]
Length = 835
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 132/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 233 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 292
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 293 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 351
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 352 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 411
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V
Sbjct: 412 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVR 468
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 469 QLAEDFLRDYTQINVGNLELS 489
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
IA V +RGLD ++++ VIN+D PN EDYVH +S K A+ F + N A +
Sbjct: 577 IATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARE 636
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L+K E + + L + D
Sbjct: 637 LIKVLEEANQAINPKLMQLVD 657
>gi|195109284|ref|XP_001999217.1| GI23184 [Drosophila mojavensis]
gi|193915811|gb|EDW14678.1| GI23184 [Drosophila mojavensis]
Length = 724
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 129/249 (51%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR + ++ +R + A PI+ + + L +
Sbjct: 229 VDFSNLTPFKKNFYQEHPTVANRSPYEVQRYRDEQEITVRGQAA-NPIQDFSEAYLPDYV 287
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
L+ + ++ P IQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 288 LKEIRRQGYKAPTPIQAQGWPIAMSGANFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 347
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 348 -DGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 406
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 407 PGRLIDFLSAGA---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 463
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 464 WPKEVKQLA 472
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 572 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 631
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 632 NNAKQAKALV 641
>gi|289724644|gb|ADD18300.1| ATP-dependent RNA helicase [Glossina morsitans morsitans]
Length = 652
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 130/262 (49%), Gaps = 49/262 (18%)
Query: 66 KRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIK 121
+ D II S+I + +KNFYT + S + + ++ ++ P P
Sbjct: 61 RNDDTPNIIWSEISL--TPFKKNFYTPCASVKDRSQSEVDNFLTNNEITLKGSSIPMPSF 118
Query: 122 TWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLR 181
+ + G ++ KL P AIQA + +SG D V + +TGSGKTLA++LP +
Sbjct: 119 EFNEGGFPDYVMTGIKKLGFAKPTAIQAQGWPIALSGRDMVGVAQTGSGKTLAYVLPAVV 178
Query: 182 HIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------QVRR--------------- 214
HI QP + D P+ L++APT EL +Q QVR
Sbjct: 179 HINNQP-RLEHSDGPIALILAPTRELAQQIQQVANEFGSQIQVRNTCIFGGAPKQPQSRD 237
Query: 215 ------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIR 262
GR+ID L + +TNL R TYLVLDEADRM DMGFEPQI +I++ IR
Sbjct: 238 LERGVEIVIATPGRLIDFLERG---VTNLRRCTYLVLDEADRMLDMGFEPQIRKIIKQIR 294
Query: 263 PDRQAVLFSPTFPPRVEILARK 284
PDRQ +++S T+P V LA +
Sbjct: 295 PDRQVLMWSATWPKEVRNLAEE 316
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
+A V ARGLD +++ VIN+D P++ EDYVH ++ + A+ + NA A D
Sbjct: 420 VATDVAARGLDVDDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTTANANKAND 479
Query: 349 LVKAFELSELVVRDDLKAVA 368
L++ ++ V+ L +A
Sbjct: 480 LIQVLREAKQVINPRLVDMA 499
>gi|380011998|ref|XP_003690078.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 566
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 129/259 (49%), Gaps = 54/259 (20%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + P YR + ++ ++ K P P+ T+ +TG +L+ +
Sbjct: 67 FKKDFYVPHEAVQNRDPRIVEQYRSEKEITLKGKNIPNPVFTFEETGFPDYVLKEIKRQG 126
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P +IQA + +SG D V I TGSGKTL+++LP + HI QP + D P+ LV
Sbjct: 127 FTEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPK-LGRKDGPIALV 185
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q R GR++D L
Sbjct: 186 LAPTRELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDGGVEIVIATPGRLLDFL 245
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+ L
Sbjct: 246 ESGR---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 302
Query: 282 AR-------KTNVCNLSIA 293
A + NV +L +A
Sbjct: 303 AEDFLKDYAQINVGSLQLA 321
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD ++++ VINFD P+ EDYVH ++ + A+ F + N+ A D
Sbjct: 409 VATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKAND 468
Query: 349 LVKAFELSELVVRDDLKAVADS 370
L++ + + V+ L +ADS
Sbjct: 469 LIQVLKEANQVINPKLLELADS 490
>gi|340725185|ref|XP_003400954.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX5-like [Bombus terrestris]
Length = 607
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/241 (37%), Positives = 121/241 (50%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
RK+FY +T S AYR ++ ++ P P + + G +L +
Sbjct: 74 FRKDFYQPHPNVTTRSSHLVEAYRSDKEITVKGTNVPGPNIFFEEGGFPDYVLNEIRRQG 133
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQA + +SG D V I +TGSGKTLA++LP + HI QP + +D P+ L+
Sbjct: 134 FGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQP-RLNRNDGPIALI 192
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q QVR GR+ID L
Sbjct: 193 LAPTRELAQQIQQVASDFGISSQVRNTCIFGGAPKGPQARDLERGVEICIATPGRLIDFL 252
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V L
Sbjct: 253 ERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKEVRNL 309
Query: 282 A 282
A
Sbjct: 310 A 310
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN D P++ EDYVH +S A+ F + NA A+D
Sbjct: 416 VATDVAARGLDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKASD 475
Query: 349 LVKAFELSELVVRDDLKAVA 368
L++ E ++ VV L ++
Sbjct: 476 LIQVLEEAKQVVNPKLYELS 495
>gi|332020300|gb|EGI60731.1| Putative ATP-dependent RNA helicase DDX5 [Acromyrmex echinatior]
Length = 462
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 130/255 (50%), Gaps = 49/255 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+RK+FY + + S +R+ ++ ++ P PI+ + + ++E +
Sbjct: 109 IRKDFYIEHLAVRNRSNEEVYHFRENAEITVKGDNIPNPIQYFEEGNFPPYVMEGIRREG 168
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQA + +SG D VAI +TGSGKTL ++LP + HI QP + GD P+ L+
Sbjct: 169 YSQPTPIQAQGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHIIHQPRINTGD-GPIVLI 227
Query: 201 MAPTGELVRQ------------QVRR---------------------------GRMIDLL 221
+APT EL +Q VR GR+ID L
Sbjct: 228 LAPTRELAQQIQEVANSFGETAAVRNTCIFGGAPKGPQAHDLERGIEICIATPGRLIDFL 287
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
K TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V L
Sbjct: 288 EKG---TTNLCRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRAL 344
Query: 282 ARK--TNVCNLSIAN 294
A T+ +L+I +
Sbjct: 345 AEDFLTDYVHLNIGS 359
>gi|156554399|ref|XP_001604593.1| PREDICTED: ATP-dependent RNA helicase p62-like [Nasonia
vitripennis]
Length = 551
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 123/241 (51%), Gaps = 47/241 (19%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FYT ++ P +R+ + ++ P PI+ + + +++ K
Sbjct: 85 FKKDFYTPHPNVSNRHPREVNEFRETHKITLKGDKVPNPIQFFEEGNFPDYVMQGIKKQG 144
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+ P IQA + +SG + V I +TGSGKTLA++LP + HI Q P+ GD P+ L+
Sbjct: 145 YSEPTPIQAQGWPIAMSGKNMVGIAQTGSGKTLAYILPAIVHINSQQPLNRGD-GPIALI 203
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q R GR+ID L
Sbjct: 204 LAPTRELAQQIQTVASDFGSLSYVRNTCIFGGAPKGGQARDLERGVEIVIATPGRLIDFL 263
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V +L
Sbjct: 264 ERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRML 320
Query: 282 A 282
A
Sbjct: 321 A 321
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++ VINFD P+ EDY+H +S ++ F + +N A D
Sbjct: 429 VATDVAARGLDVDDVRYVINFDYPSSSEDYIHRIGRTGRSQSSGTSYAFFTPQNGRQAKD 488
Query: 349 LVKAFELSELVVRDDLKAVA 368
L+ + ++ L +A
Sbjct: 489 LINVLREANQIINPKLSELA 508
>gi|307215190|gb|EFN89962.1| Probable ATP-dependent RNA helicase DDX17 [Harpegnathos saltator]
Length = 540
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 128/259 (49%), Gaps = 54/259 (20%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + P YR + ++ +R K P P+ + + G +L+ +K
Sbjct: 42 FKKDFYIPNEAVQNRDPRVVEQYRSEKEITLRGKNIPNPVFNFGEAGFPEYVLKEITKQG 101
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P +IQA + +SG D V I TGSGKTL+++LP + HI QP + D P+ LV
Sbjct: 102 FNEPTSIQAQGWPIALSGRDMVGIASTGSGKTLSYILPAIVHINSQPK-LSRKDGPIALV 160
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q R GR++D L
Sbjct: 161 LAPTRELAQQIQQVADDFGHSSGIRNTCLYGGAPKGAQARDLDSGVEIVIATPGRLLDFL 220
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+ L
Sbjct: 221 ESGK---TNLKRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKNL 277
Query: 282 AR-------KTNVCNLSIA 293
A + NV +L +A
Sbjct: 278 AEDFLKDYAQINVGSLQLA 296
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD ++++ VINFD P+ EDYVH ++ + A+ F + N+ A D
Sbjct: 384 VATDVAARGLDVEDVKFVINFDYPSCSEDYVHRIGRTGRRQKTGTAYTFFTPNNSNKAND 443
Query: 349 LVKAFELSELVVRDDLKAVAD 369
L++ + + V+ L +AD
Sbjct: 444 LIQVLKEANQVINPKLLELAD 464
>gi|312375424|gb|EFR22803.1| hypothetical protein AND_14200 [Anopheles darlingi]
Length = 971
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 129/261 (49%), Gaps = 56/261 (21%)
Query: 85 LRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + S +R+ + + P P +++ + ++ K
Sbjct: 227 FQKDFYVPHPNVMARSDEEVQVFRESTQVTVMGNNVPHPCQSFEEGNFPEYVMNEIKKQG 286
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQ+ + +SG D V I +TGSGKTLA++LP L HI Q P+ GD P+ LV
Sbjct: 287 FPRPTAIQSQGWPIALSGRDMVGIAQTGSGKTLAYMLPGLVHISHQKPLTRGD-GPIVLV 345
Query: 201 MAPTGELVRQ-----------------------------QVRR------------GRMID 219
+APT EL +Q QVR GR+ID
Sbjct: 346 LAPTRELAQQIQTVVREFGNHSKPNIRYTCIFGGALKGPQVRDLERGVEVVIATPGRLID 405
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L + ITNL R TYLVLDEADRM DMGFEPQI +IV+ IRPDRQ +++S T+P V+
Sbjct: 406 FLERG---ITNLHRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQVLMWSATWPKEVQ 462
Query: 280 ILAR-------KTNVCNLSIA 293
LA + N+ +LS+A
Sbjct: 463 TLAEDFLRDYIQINIGSLSLA 483
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH------HCCQSWLKSCAFRFISEENAIY 345
+A V ARGLD ++++ VINFD PN EDY+H C Q A+ F + N
Sbjct: 572 VATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCSQY---GTAYSFFTPNNGRQ 628
Query: 346 ATDLVKAFE 354
A +L+ E
Sbjct: 629 ARELLSVLE 637
>gi|340500096|gb|EGR26997.1| hypothetical protein IMG5_203370 [Ichthyophthirius multifiliis]
Length = 661
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 143/283 (50%), Gaps = 59/283 (20%)
Query: 53 SDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSPA----YRKQ 106
SD E+ + K+ K+ KN +++ K+ YQQ KNFY + +I + +K
Sbjct: 231 SDGEIDFAKLKENKK-KNFKLLDKFDHSKVKYQQFTKNFYIEHPDIQSLQQTQIEKIKKD 289
Query: 107 LDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITE 166
++K++ C P P+ ++ G +++ SK + P IQ+ A +SG D V + +
Sbjct: 290 FEIKVKGYCIPAPLVSFGYLGFDEQLINQISKQGFQKPTPIQSQALPCALSGRDVVGVAK 349
Query: 167 TGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------- 210
TGSGKT++++ P+L HI +Q + + P+GL++APT EL +Q
Sbjct: 350 TGSGKTVSYVWPLLIHILDQQE-LEKNQGPIGLILAPTRELCQQIYLECKKYAKIYNISV 408
Query: 211 -----------QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFD 247
Q R GR+I+++ K K TN+ R TYLV+DEAD+MF
Sbjct: 409 GALLGGENKHEQWRMLKTGVEILVATPGRLIEMIQK---KATNMIRCTYLVIDEADKMFS 465
Query: 248 MGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNL 290
MGFE QI IVQ IRPDRQ +LF+ T K N+ NL
Sbjct: 466 MGFEKQIRSIVQQIRPDRQTLLFTATL---------KKNILNL 499
>gi|195453112|ref|XP_002073643.1| GK14214 [Drosophila willistoni]
gi|194169728|gb|EDW84629.1| GK14214 [Drosophila willistoni]
Length = 745
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/249 (36%), Positives = 129/249 (51%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR + ++ +R + A PI+ + + L +
Sbjct: 257 VDFSNLTPFKKNFYQEHTTVANRSPYEVQRYRDEHEITVRGQ-AQNPIQDFNEVYLPDYV 315
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
++ + ++ P IQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 316 MKEIRRQGYKEPTPIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 375
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 376 D-GPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 434
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 435 PGRLIDFLSAGS---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 491
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 492 WPKEVKQLA 500
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 600 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 659
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 660 NNAKQAKALV 669
>gi|283854609|gb|ADB44900.1| DEAD(Asp-Glu-Ala-Asp) box polypeptide 5 [Macrobrachium nipponense]
Length = 540
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 128/259 (49%), Gaps = 54/259 (20%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY ++ SP YR + ++ +R K P PI+ + ++ +
Sbjct: 60 FEKNFYQPTPQVLNRSPYEVEQYRNEKEITLRGKNIPNPIQYFTDYNFPDYVMAEIRRQG 119
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
+E P IQA + + G D V I +TGSGKTL ++LP + HI QP + GD P+ LV
Sbjct: 120 YEIPTPIQAQGWPISLQGRDFVGIAQTGSGKTLGYILPAIVHINHQPYLERGD-GPIALV 178
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q+R GR+ID L
Sbjct: 179 LAPTRELAQQILTVSQDFGTSSKIRSTCVFGGAPKGPQIRDLERGVEICIAIPGRLIDFL 238
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V L
Sbjct: 239 EASK---TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRNL 295
Query: 282 AR-------KTNVCNLSIA 293
A + NV +LS++
Sbjct: 296 AEDFLKDYIQLNVGSLSLS 314
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISEENAIYATD 348
+A V ARGLD +++ VIN+D P+ EDYVH ++ A+ F + +N A D
Sbjct: 402 VATDVAARGLDVDDVKFVINYDYPSCSEDYVHRIGRTGRSDKTGTAYTFFTADNCKQAKD 461
Query: 349 LVKAFELSELVV 360
L+ + + VV
Sbjct: 462 LIDVLKEANQVV 473
>gi|307110010|gb|EFN58247.1| hypothetical protein CHLNCDRAFT_30080, partial [Chlorella
variabilis]
Length = 551
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 122/244 (50%), Gaps = 47/244 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + +T S YR+ ++ + + PKP+ + + +L +
Sbjct: 87 KFEKNFYYEHPAVTARSEEEVRRYREMREIHVTGEGIPKPVSNFEEASFPEYVLAEIQRA 146
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQA + + G D V I ETGSGKTLA+LLP + HI Q + PGD P+ L
Sbjct: 147 GFTEPSPIQAQGWPMALLGRDLVGIAETGSGKTLAYLLPGVVHINAQAHLSPGD-GPIVL 205
Query: 200 VMAPTGELVRQ------------------------------QVRRG---------RMIDL 220
+APT EL Q +RRG R+ID
Sbjct: 206 CLAPTRELAVQIQNECARFGSTSRIKSTCVYGGAPKGPQANDLRRGVEIVIATPGRLIDF 265
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +L+S T+P ++
Sbjct: 266 LES---RTTNLRRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDRQTLLWSATWPKEIQT 322
Query: 281 LARK 284
LAR+
Sbjct: 323 LARE 326
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYA 346
+ IA V ARGLD K++++VIN+D P+ EDYVH ++ A+ F + N A
Sbjct: 426 IMIATDVAARGLDVKDIKMVINYDMPSCAEDYVHRIGRTGRAGASGAAYSFFTAANGRMA 485
Query: 347 TDLVKAFELSELVVRDDLKAVA 368
LV+ E + V +L+ A
Sbjct: 486 RQLVQILEEASQAVPPELRQFA 507
>gi|380014980|ref|XP_003691490.1| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
florea]
Length = 728
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 129/253 (50%), Gaps = 56/253 (22%)
Query: 108 DLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITET 167
++ ++ P PI+ + ++ ++E K P AIQA + +SG D V I +T
Sbjct: 95 EITVKGNNTPSPIQAFEESNFPDYVMEEIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQT 154
Query: 168 GSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------- 210
GSGKTLA++LP HI QP + GD P+ L++APT EL +Q
Sbjct: 155 GSGKTLAYILPATVHINHQPRLSRGD-GPIVLILAPTRELAQQIQSVARDFGSSSCIRNT 213
Query: 211 ----------QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDM 248
Q R GR+ID L K TNL R TYLVLDEADRM DM
Sbjct: 214 CIFGGSPKGPQARDLERGVEICIATPGRLIDFLEKG---TTNLRRCTYLVLDEADRMLDM 270
Query: 249 GFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIANSVRARGL 301
GFEPQI +I++ IRPDRQ +++S T+P V+ LA + N+ +L++A + R +
Sbjct: 271 GFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLSDYIQINIGSLTLAANHNIRQI 330
Query: 302 ------DEKELEL 308
EKE++L
Sbjct: 331 VEICQEHEKEMKL 343
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEENAIYA 346
+A V ARGLD ++++ VINFD PN EDY+H CQS A+ + + NA A
Sbjct: 410 VATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCQS--AGTAYAYFTPNNARQA 467
Query: 347 TDLVKAFELSELVVRDDLKAVADSF 371
+L+ E + + L +A+S
Sbjct: 468 KELISVLEEAGQAINPQLADLANSI 492
>gi|66805957|ref|XP_636700.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
gi|74896924|sp|Q54IV3.1|DDX42_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx42; AltName:
Full=DEAD box protein 42
gi|60465098|gb|EAL63199.1| hypothetical protein DDB_G0288501 [Dictyostelium discoideum AX4]
Length = 986
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/248 (35%), Positives = 126/248 (50%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
K +Y + K FY + +I ++ RK LD+++ P+ ++ G +L+
Sbjct: 259 KEEYIEFNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQ 318
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+K + E P IQ A + +SG D +AI +TGSGKT F+ P + HI +QP + GD
Sbjct: 319 AIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGD- 377
Query: 195 SPVGLVMAPTGELV---------------------------RQQVRR------------G 215
P+ L +APT EL +QQ + G
Sbjct: 378 GPIALFLAPTRELAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPG 437
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID++ +K T L RV+YLVLDEAD+MFD GF PQ+ IV ++RPDRQ +LFS TF
Sbjct: 438 RLIDMI---KLKATKLNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFK 494
Query: 276 PRVEILAR 283
P VE AR
Sbjct: 495 PNVEEFAR 502
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K N+ IA V ARGLD ++ V+N+D D E + H ++ A+ I+
Sbjct: 597 KEGKINILIATDVAARGLDIPLIKNVVNYDTSRDIESHTHRIGRTGRAGNTGVAYTLITP 656
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
++ ++ DL+K E + V +L VA
Sbjct: 657 KDIHFSVDLIKNLESASQFVPPELIDVA 684
>gi|357625037|gb|EHJ75591.1| hypothetical protein KGM_15102 [Danaus plexippus]
Length = 452
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/238 (37%), Positives = 125/238 (52%), Gaps = 50/238 (21%)
Query: 102 AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDS 161
AYR Q + ++ + P P + + G ++ K NP IQA + +SG D
Sbjct: 9 AYRSQHQITVKGRDVPAPSMFFDEGGFPDYAMKEILKQGFPNPTPIQAQGWPIALSGRDM 68
Query: 162 VAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------- 210
V I +TGSGKTLA++LP + HI QP ++ D+ P+ LV+APT EL +Q
Sbjct: 69 VGIAQTGSGKTLAYILPAIVHIINQPRLLR-DEGPIVLVLAPTRELAQQIQTVANEFGQS 127
Query: 211 -QVRR---------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEA 242
QVR GR+ID L K+ TNL R TYLVLDEA
Sbjct: 128 VQVRNTCIFGGAPKGPQGRTLERGVEIVIATPGRLIDFLEKD---TTNLRRCTYLVLDEA 184
Query: 243 DRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIA 293
DRM DMGFEPQI +I++ IRPDRQ +++S T+P V+ LA + N+ +LS++
Sbjct: 185 DRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQNLAEEFLHDYIQINIGSLSLS 242
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN+D PN+ EDYVH +S A+ + N+ A D
Sbjct: 330 VATDVAARGLDVEDVKFVINYDYPNNSEDYVHRIGRTGRSHNTGTAYTLFTPNNSAKAKD 389
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTG 386
L+ + + VV L +A+ +G +G G
Sbjct: 390 LLSVLQEANQVVNPKLLE-----LAQCGMGFKGKYGRG 422
>gi|406861821|gb|EKD14874.1| putative ATP-dependent RNA helicase dbp2 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 582
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 122/242 (50%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T S A +R ++ ++ P+P++ + + G ++
Sbjct: 116 KFEKSFYKEDPQVTARSEADVQKFRASHNIAVQGSDVPRPVENFDEAGFPAYVMSEVKAQ 175
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 176 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 234
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q Q+R GR+ID+
Sbjct: 235 VLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDM 294
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ ++S T+P V
Sbjct: 295 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRA 351
Query: 281 LA 282
LA
Sbjct: 352 LA 353
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 451 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 510
Query: 341 ENAIYATDLVKAF 353
+N+ A DLV
Sbjct: 511 DNSKQARDLVNVL 523
>gi|194381202|dbj|BAG64169.1| unnamed protein product [Homo sapiens]
Length = 420
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 131/261 (50%), Gaps = 55/261 (21%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIRE-KCAPKPIKTWRQTGLTTKILETFSK 138
+ KNFY + E+ R++P R++ ++ +R PKP+ + +++
Sbjct: 42 KFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMD 101
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
+ P IQ L +SG D V I +TGSGKTLA+LLP + HI QP + GD P+
Sbjct: 102 QHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGD-GPIC 160
Query: 199 LVMAPTGELVRQ---------------------------QVRR------------GRMID 219
LV+APT EL +Q Q+R GR+ID
Sbjct: 161 LVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLID 220
Query: 220 LLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L ++G TNL R TYLVLDEADRM DMGFEPQI + V IRPDRQ +++S T+P V
Sbjct: 221 FL-ESGK--TNLRRCTYLVLDEADRMLDMGFEPQIRKTVDQIRPDRQTLMWSATWPKEVR 277
Query: 280 ILAR-------KTNVCNLSIA 293
LA + NV NL ++
Sbjct: 278 QLAEDFLRDYTQINVGNLELS 298
>gi|328780921|ref|XP_394723.3| PREDICTED: probable ATP-dependent RNA helicase DDX17-like [Apis
mellifera]
Length = 726
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 129/253 (50%), Gaps = 56/253 (22%)
Query: 108 DLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITET 167
++ ++ P PI+ + ++ ++E K P AIQA + +SG D V I +T
Sbjct: 93 EITVKGNNTPSPIQAFEESNFPDYVMEEIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQT 152
Query: 168 GSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ----------------- 210
GSGKTLA++LP HI QP + GD P+ L++APT EL +Q
Sbjct: 153 GSGKTLAYILPATVHINHQPRLSRGD-GPIVLILAPTRELAQQIQSVARDFGSSSCIRNT 211
Query: 211 ----------QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDM 248
Q R GR+ID L K TNL R TYLVLDEADRM DM
Sbjct: 212 CIFGGSPKGPQARDLERGVEICIATPGRLIDFLEKG---TTNLRRCTYLVLDEADRMLDM 268
Query: 249 GFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIANSVRARGL 301
GFEPQI +I++ IRPDRQ +++S T+P V+ LA + N+ +L++A + R +
Sbjct: 269 GFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLSDYIQINIGSLTLAANHNIRQI 328
Query: 302 ------DEKELEL 308
EKE++L
Sbjct: 329 VEICQEHEKEMKL 341
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEENAIYA 346
+A V ARGLD ++++ VINFD PN EDY+H CQS A+ + + NA A
Sbjct: 408 VATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCQS--AGTAYAYFTPNNARQA 465
Query: 347 TDLVKAFELSELVVRDDLKAVADSF 371
+L+ E + + L +A+S
Sbjct: 466 KELISVLEEAGQAINPQLADLANSI 490
>gi|440636496|gb|ELR06415.1| ATP-dependent RNA helicase dbp2 [Geomyces destructans 20631-21]
Length = 548
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 124/242 (51%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + ++T S A +R ++ I PKP++T+ + G ++
Sbjct: 96 KFEKSFYKEDPQVTNRSDADVAKFRALHNIAITGTNVPKPVETFDEAGFPAYVINEVKAQ 155
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 156 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 214
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
V+APT EL ++Q++ + GR+ID+
Sbjct: 215 VLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDM 274
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPD+Q ++S T+P V
Sbjct: 275 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDKQTCMWSATWPKEVRA 331
Query: 281 LA 282
LA
Sbjct: 332 LA 333
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLK---SCAFRFISE 340
KT + +A V +RG+D + + V N+D PN+ EDY+H ++ A +
Sbjct: 431 KTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQMGTAITLFTT 490
Query: 341 ENAIYATDLVKAF 353
+N A DLV
Sbjct: 491 DNQKQARDLVNVL 503
>gi|198452778|ref|XP_001358938.2| GA10214 [Drosophila pseudoobscura pseudoobscura]
gi|198132073|gb|EAL28081.2| GA10214 [Drosophila pseudoobscura pseudoobscura]
Length = 738
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/249 (36%), Positives = 129/249 (51%), Gaps = 51/249 (20%)
Query: 80 IDYQQL---RKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKI 132
+D+ L +KNFY + + SP YR + ++ +R + A PI+ + + L +
Sbjct: 249 VDFSNLTPFKKNFYQEHATVAARSPYEVQRYRDEHEITVRGQ-AQNPIQDFGEVYLPEYV 307
Query: 133 LETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
+ + ++ P IQA + +SG + V I +TGSGKTL ++LP + HI Q P+ G
Sbjct: 308 TKEIRRQGYKEPTPIQAQGWPIAMSGANFVGIAKTGSGKTLGYILPAIVHINNQQPLQRG 367
Query: 193 DDSPVGLVMAPTGELVRQ---------------------------QVRR----------- 214
D P+ LV+APT EL +Q Q+R
Sbjct: 368 D-GPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 426
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+ID L G TNL R TYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T
Sbjct: 427 PGRLIDFLSSGG---TNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 483
Query: 274 FPPRVEILA 282
+P V+ LA
Sbjct: 484 WPKEVKQLA 492
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
++ N+ +A V ARGLD ++ VINFD P + EDY+H +S K +F F ++
Sbjct: 592 RSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTK 651
Query: 341 ENAIYATDLV 350
NA A LV
Sbjct: 652 NNAKQAKALV 661
>gi|350399327|ref|XP_003485490.1| PREDICTED: ATP-dependent RNA helicase p62-like [Bombus impatiens]
Length = 519
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 123/240 (51%), Gaps = 44/240 (18%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + P +R++ + ++ + P PI+ + + +++ K
Sbjct: 60 FKKDFYIPHPNVQSRHPQEIDIFRQENQITLKGEKIPNPIQHFEEGNFPDHVMQCIRKQG 119
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ GD P+ LV
Sbjct: 120 FSEPTAIQAQGWPIAMSGQNMVGIAQTGSGKTLGYILPAIVHISSQQPLNHGD-GPIALV 178
Query: 201 MAPTGELVRQ------------------------QVRR------------GRMIDLLCKN 224
+APT EL +Q Q R GR+ID L +
Sbjct: 179 LAPTRELAQQIQKVTYNFGYVRSTCIFGGAPKGSQARDLEQGVEICIATPGRLIDFLERG 238
Query: 225 GVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
ITNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V LA +
Sbjct: 239 ---ITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRNLAEE 295
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISE 340
+ N ++ +A V ARGLD +++ VINFD P EDY+H ++ + ++ F +
Sbjct: 393 RRNKDSILVATDVAARGLDVDDVKYVINFDYPTSSEDYIHRIGRTGRSNNSGTSYAFFTP 452
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVAD 369
+N+ A L+ + ++ V+ L +AD
Sbjct: 453 QNSRQAKGLINVLKEAKQVINPKLMELAD 481
>gi|380090926|emb|CCC11459.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 610
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 129/256 (50%), Gaps = 49/256 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ K+FY + + S A +R + I PKP++T+ + G +++
Sbjct: 138 KFEKSFYQEHPSVANRSAAEVDKFRADHSIAIFGNDVPKPVETFDEAGFPRYVMDEVKAQ 197
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ+ + +SG D V I ETGSGKTL + LP + HI QP + PG D P+ L
Sbjct: 198 GFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPG-DGPIVL 256
Query: 200 VMAPTGEL---VRQQVRR------------------------------------GRMIDL 220
++APT EL ++Q++ + GR+ID+
Sbjct: 257 ILAPTRELAVQIQQEISKFGKSSRIRNTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDM 316
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L TNL RVTYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P V
Sbjct: 317 LESGK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQTLMWSATWPKEVRN 373
Query: 281 LARK--TNVCNLSIAN 294
LA TN ++I +
Sbjct: 374 LASDFLTNFIQVNIGS 389
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
KT + +A V +RG+D + + V+N+D PN+ EDY+H ++ K A F +
Sbjct: 475 KTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTT 534
Query: 341 ENAIYATDLVKAFE 354
+N+ A +LV +
Sbjct: 535 DNSKQARELVGVLQ 548
>gi|345493220|ref|XP_001605420.2| PREDICTED: probable ATP-dependent RNA helicase DDX17-like isoform 1
[Nasonia vitripennis]
Length = 777
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 137/282 (48%), Gaps = 60/282 (21%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+ KN Y I +P Y ++ ++ P PI+ + ++ ++E K
Sbjct: 73 ITKNLYVPHVNIMSRTPDEVSKYYSGKEITVKGNNTPFPIQAFEESNFPDYVMEEIRKQG 132
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQA + +SG D V I +TGSGKTLA++LP HI QP + GD P+ LV
Sbjct: 133 FLEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPATVHINNQPRLSRGD-GPIVLV 191
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL +Q Q R GR+ID L
Sbjct: 192 LAPTRELAQQIQSVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPGRLIDFL 251
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
+ TNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V+ L
Sbjct: 252 ERG---TTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQAL 308
Query: 282 AR-------KTNVCNLSIANSVRARGL------DEKELELVI 310
A + N+ +L++A + R + EKE +L +
Sbjct: 309 AEDFLTDYIQINIGSLNLAANHNIRQIIEICQEHEKENKLAV 350
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 7/84 (8%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEENAIYA 346
+A V ARGLD ++++ V+NFD PN EDY+H CQS A+ + + NA A
Sbjct: 415 VATDVAARGLDVEDVKYVVNFDYPNSSEDYIHRIGRTGRCQS--AGTAYAYFTPNNARQA 472
Query: 347 TDLVKAFELSELVVRDDLKAVADS 370
+L+ E + ++ L +A+S
Sbjct: 473 KELISVLEEAGQIINPQLAEMANS 496
>gi|19173435|ref|NP_597238.1| P68-LIKE PROTEIN (DEAD BOX FAMILY OF RNA HELICASES)
[Encephalitozoon cuniculi GB-M1]
gi|74664187|sp|Q8SRB2.1|DBP2_ENCCU RecName: Full=ATP-dependent RNA helicase DBP2
gi|19171024|emb|CAD26414.1| P68-LIKE PROTEIN (DEAD BOX FAMILY OF RNA HELICASES)
[Encephalitozoon cuniculi GB-M1]
gi|449328762|gb|AGE95038.1| p68-like protein [Encephalitozoon cuniculi]
Length = 495
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 129/242 (53%), Gaps = 47/242 (19%)
Query: 84 QLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ +KNFY +A I+RM+P+ +RK ++ ++ P PI+ + + G +++++ + +
Sbjct: 46 EFQKNFYQEAESISRMTPSEVSSFRKTNEMIVKGTNVPHPIQKFEEAGFSSEVVSSLVEK 105
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P AIQ + +SG D V I +TGSGKTL+F+LP L H +Q P+ G D P+ L
Sbjct: 106 GFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPALVHAKDQQPLRRG-DGPIVL 164
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT ELV Q Q+R GR+IDL
Sbjct: 165 VLAPTRELVMQIKKVVDEFCGMFNLRSTAVYGGASSQPQIRALHEGAEVVIATPGRLIDL 224
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
+ L+RVT+LVLDEADRM DMGFEPQ+ +I+ +RQ +++S T+P V
Sbjct: 225 HDQGHAP---LSRVTFLVLDEADRMLDMGFEPQLRKIIPKTNANRQTLMWSATWPREVRG 281
Query: 281 LA 282
LA
Sbjct: 282 LA 283
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----KSCAFRFISEENAIYAT 347
IA V RGLD +++LVINFD P EDYVH ++ + + F + + A
Sbjct: 386 IATEVAGRGLDVNDVKLVINFDFPGSCEDYVHRIGRTARGNTKEGISHTFFTVGDKANAR 445
Query: 348 DLVKAFELSELVVRDDLK 365
+L++ + V DL+
Sbjct: 446 ELIRMLREANQTVPSDLE 463
>gi|307183175|gb|EFN70084.1| Probable ATP-dependent RNA helicase DDX17 [Camponotus floridanus]
Length = 705
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 129/258 (50%), Gaps = 56/258 (21%)
Query: 103 YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
Y ++ ++ P PI+ + ++ ++E K P AIQA + +SG D V
Sbjct: 91 YHAGKEITVKGNNTPSPIQAFEESNFPDYVMEEIKKQGFAEPTAIQAQGWPIALSGRDLV 150
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKTLA++LP HI QP + GD P+ L++APT EL +Q
Sbjct: 151 GIAQTGSGKTLAYILPATVHINHQPRLNRGD-GPIVLILAPTRELAQQIQTVARDFGSSS 209
Query: 211 ---------------QVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
Q R GR+ID L K TNL R TYLVLDEAD
Sbjct: 210 CIRNTCIFGGSPKGPQARDLERGVEICIATPGRLIDFLEKG---TTNLRRCTYLVLDEAD 266
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR-------KTNVCNLSIANSV 296
RM DMGFEPQI +I++ IRPDRQ +++S T+P V+ LA + N+ +LS+A +
Sbjct: 267 RMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQALAEDFLTDYIQINIGSLSLAANH 326
Query: 297 RARGL------DEKELEL 308
R + EKE +L
Sbjct: 327 NIRQIIEICQEHEKEYKL 344
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHC-----CQSWLKSCAFRFISEENAIYA 346
+A V ARGLD ++++ VINFD PN EDY+H CQS A+ + + NA A
Sbjct: 411 VATDVAARGLDVEDVKYVINFDYPNSSEDYIHRIGRTGRCQS--AGTAYAYFTPNNARQA 468
Query: 347 TDLVKAFELSELVVRDDLKAVADSF 371
+L+ E + + L +A+S
Sbjct: 469 KELIAVLEEAGQTINPQLADIANSM 493
>gi|158294546|ref|XP_315671.4| AGAP005652-PA [Anopheles gambiae str. PEST]
gi|157015613|gb|EAA11703.5| AGAP005652-PA [Anopheles gambiae str. PEST]
Length = 728
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/247 (36%), Positives = 124/247 (50%), Gaps = 47/247 (19%)
Query: 81 DYQQLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETF 136
D KNFY + + +S +Y + + ++ + P+P + GL I+E
Sbjct: 67 DLTPFEKNFYQPSAGLMGLSVSDIDSYLDKHQITLKGRDVPRPSMEFEDGGLPVYIMEEL 126
Query: 137 SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSP 196
+ P AIQA + +SG D V I +TGSGKTLA+++P L HI Q + G D P
Sbjct: 127 KRQGFAKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYVVPSLVHIQHQATIRRG-DGP 185
Query: 197 VGLVMAPTGELVRQ---------------------------QVRR------------GRM 217
+ L++APT EL +Q Q+R GR+
Sbjct: 186 IALILAPTRELAQQIQQVATDFGSRVSANNTCVFGGAPKGPQIRDLERGAEIVIATPGRL 245
Query: 218 IDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPR 277
ID L + ITNL R TYLVLDEADRM DMGFEPQI +I+ IRPDRQ +++S T+P
Sbjct: 246 IDFLERG---ITNLRRCTYLVLDEADRMLDMGFEPQIRKIMGQIRPDRQVLMWSATWPKE 302
Query: 278 VEILARK 284
V LA +
Sbjct: 303 VRNLAEE 309
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISEENAIYATD 348
+A V ARGLD ++++ VIN+D P++ EDYVH ++ + A+ + NA A D
Sbjct: 413 VATDVAARGLDVEDVKFVINYDYPSNSEDYVHRIGRTGRSNNTGTAYTLFTNSNANKAND 472
Query: 349 LVKAFELSELVVRDDLKAVADSFIAK 374
L+ + V+ L +A + K
Sbjct: 473 LINVLREANQVINPRLVELAKPSMGK 498
>gi|340721213|ref|XP_003399019.1| PREDICTED: ATP-dependent RNA helicase p62-like [Bombus terrestris]
Length = 533
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/240 (35%), Positives = 123/240 (51%), Gaps = 44/240 (18%)
Query: 85 LRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + P +R++ + ++ + P PI+ + + +++ K
Sbjct: 74 FKKDFYIPHPNVQSRHPQEIDTFRQENQITLKGEKIPNPIQHFEEGNFPDHVMQCIRKQG 133
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQA + +SG + V I +TGSGKTL ++LP + HI Q P+ GD P+ LV
Sbjct: 134 FSEPTAIQAQGWPIAMSGQNMVGIAQTGSGKTLGYILPAIVHISSQQPLNRGD-GPIALV 192
Query: 201 MAPTGELVRQ------------------------QVRR------------GRMIDLLCKN 224
+APT EL +Q Q R GR+ID L +
Sbjct: 193 LAPTRELAQQIQKVTYNFGYVRSTCIFGGAPKGNQARDLEHGVEICIATPGRLIDFLERG 252
Query: 225 GVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
ITNL R TYLVLDEADRM DMGFEPQI +I++ IRPDRQ +++S T+P V LA +
Sbjct: 253 ---ITNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVRNLAEE 309
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS---CAFRFISE 340
+ N ++ +A V ARGLD +++ VINFD P EDY+H ++ + ++ F +
Sbjct: 407 RRNKDSILVATDVAARGLDVDDVKYVINFDYPTSSEDYIHRIGRTGRSNNSGTSYAFFTP 466
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVAD 369
+N+ A L+ + ++ V+ L +AD
Sbjct: 467 QNSRQAKGLINVLKEAKQVINPKLMELAD 495
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,754,921,602
Number of Sequences: 23463169
Number of extensions: 328803458
Number of successful extensions: 1075761
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 20563
Number of HSP's successfully gapped in prelim test: 3552
Number of HSP's that attempted gapping in prelim test: 1000487
Number of HSP's gapped (non-prelim): 70363
length of query: 494
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 347
effective length of database: 8,910,109,524
effective search space: 3091808004828
effective search space used: 3091808004828
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)