BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042373
(494 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SF41|RH45_ARATH DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana
GN=RH45 PE=2 SV=1
Length = 989
Score = 283 bits (725), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/381 (45%), Positives = 217/381 (56%), Gaps = 90/381 (23%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNC-------FR------------------LGRRLPAEDS 49
EIDPLDAFMN M E +N F+ LGR + EDS
Sbjct: 250 EIDPLDAFMNTMVLPEVEKLSNIVIDGILDFKMNGKETGDQAKKGFNKAALGRIIQGEDS 309
Query: 50 HSASDYE---------------LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAR 94
S DY FMKR KK K +K + SKI +Y+ RKNFY + +
Sbjct: 310 DS--DYSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKI--EYEPFRKNFYIEVK 365
Query: 95 EITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAP 150
+I+RM+ AYRK+L+LK+ K P+PI+ W QTGLT+KIL+T KLN+E P+ IQA
Sbjct: 366 DISRMTQDAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQ 425
Query: 151 ASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ 210
A +I+SG D + + +TGSGKTL F+LPMLRHI +QPPV GD P+GLVMAPT ELV+Q
Sbjct: 426 ALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGD-GPIGLVMAPTRELVQQ 484
Query: 211 ------------------------------QVRRG---------RMIDLLCKNGVKITNL 231
+++RG RMID+LC + KITNL
Sbjct: 485 IYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNL 544
Query: 232 TRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLS 291
RVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQ VLFS TFP +VE LARK V N
Sbjct: 545 RRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARK--VLNKP 602
Query: 292 IANSVRARGLDEKELELVINF 312
+ V R + K++ ++
Sbjct: 603 VEIQVGGRSVVNKDITQLVEI 623
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/202 (53%), Positives = 134/202 (66%), Gaps = 9/202 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K++VCNL IA SV ARGLD KELELV+NFDAPN YEDYVH ++ K CA FISE
Sbjct: 661 KSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 720
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVKA ELSE V DD+KAVA+ F+AKV G+ Q HGTG+GG +
Sbjct: 721 DDAKYAPDLVKALELSEQPVPDDVKAVAEGFMAKVKQGIEQAHGTGYGGSGFKFNEEEDE 780
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIATIAAASNSKASAST 460
K +KAQAKEYGF E+KSDSED ++ RK+GGDIS Q +I A+ + A++
Sbjct: 781 VRKAAKKAQAKEYGFEEEKSDSEDENDVVRKAGGDISQQ----QITLAQIAAIASAASKA 836
Query: 461 PSLISVAQLLPNGGPSIPLPGV 482
P ++ QLLPNGG PG+
Sbjct: 837 P--VTANQLLPNGGGLATEPGI 856
>sp|Q84UQ1|RH42_ORYSJ DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp.
japonica GN=Os08g0159900 PE=2 SV=1
Length = 1049
Score = 279 bits (713), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/274 (55%), Positives = 183/274 (66%), Gaps = 46/274 (16%)
Query: 54 DYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLDL 109
D E FMKR KK K +K + SKI DYQ RKNFY + ++IT+M+ AYRKQL+L
Sbjct: 355 DDEEFMKRVKKTKAEKLAIVDHSKI--DYQPFRKNFYIEVKDITKMAAEEVAAYRKQLEL 412
Query: 110 KIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGS 169
K+ K PKPIKTW Q+GLT+K+L+T KL E P++IQA A +I+SG D + I +TGS
Sbjct: 413 KVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQALPIIMSGRDCIGIAKTGS 472
Query: 170 GKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------- 210
GKTLAF+LPMLRH+ +QP VVPG D P+GL+MAPT ELV Q
Sbjct: 473 GKTLAFVLPMLRHVKDQPAVVPG-DGPIGLIMAPTRELVVQIHSDIKKFSKALGINCVAI 531
Query: 211 -----------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
+++R GRMID+LC + KITNL RVT+LV+DEADRMFDMGF
Sbjct: 532 YGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGF 591
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
EPQITRIVQN RPDRQ VLFS TFP +VEILARK
Sbjct: 592 EPQITRIVQNTRPDRQTVLFSATFPRQVEILARK 625
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/157 (55%), Positives = 105/157 (66%), Gaps = 4/157 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+NVC+L IA SV ARGLD KELELV+N+D PN YEDYVH ++ K A FISE
Sbjct: 718 KSNVCSLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKGFAVTFISE 777
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E YA DLVKA ELSE V +DLK +AD F+AKV G Q HGTG+GG +
Sbjct: 778 EEERYAPDLVKALELSEQAVPEDLKGLADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDE 837
Query: 401 RGKQLRKAQAKEYGFGEDKSDSE-DVDEGTRKSGGDI 436
K +KAQA+EYG+ EDKSDS+ D + G RK+GGD+
Sbjct: 838 ARKSAKKAQAREYGYEEDKSDSDSDEEGGVRKAGGDL 874
>sp|Q8H0U8|RH42_ARATH DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana
GN=RH42 PE=1 SV=2
Length = 1166
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/394 (43%), Positives = 220/394 (55%), Gaps = 94/394 (23%)
Query: 11 VVQIEIDPLDAFMNDME-------CSFA--------------------EHPNNCFR--LG 41
V + EIDPLDAFMN M C+ A + P F LG
Sbjct: 375 VDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKESGDRPKKGFNKALG 434
Query: 42 RRLPAEDSHSASDYE---------------LFMKRAKKKKRDKNREIIKSKIKIDYQQLR 86
R + EDS S DY FMKR KK K +K + SKI +Y+ R
Sbjct: 435 RIIQGEDSDS--DYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKI--EYEPFR 490
Query: 87 KNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHE 142
KNFY + ++I+RM+ YRK+L+LK+ K P+PIK W QTGLT+KIL+T KLN+E
Sbjct: 491 KNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYE 550
Query: 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMA 202
P+ IQ A +I+SG D + + +TGSGKTL F+LPMLRHI +QPPV GD P+GLVMA
Sbjct: 551 KPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGD-GPIGLVMA 609
Query: 203 PTGELVRQ------------------------------QVRRG---------RMIDLLCK 223
PT ELV+Q +++RG RMID+LC
Sbjct: 610 PTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCT 669
Query: 224 NGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILAR 283
+ KITNL RVT+LV+DEADRMFDMGFEPQITRI+QNIRP+RQ VLFS TFP +VE LAR
Sbjct: 670 SSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLAR 729
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPND 317
K V N + V R + K++ ++ +D
Sbjct: 730 K--VLNKPVEIQVGGRSVVNKDITQLVEVRPESD 761
Score = 178 bits (452), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 143/210 (68%), Gaps = 5/210 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K +VCNL IA SV ARGLD KELELV+NFDAPN YEDYVH ++ K CA FISE
Sbjct: 823 KNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISE 882
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
++A YA DLVKA ELSE V DDLKA+AD F+ KV G+ Q HGTG+GG +
Sbjct: 883 DDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQGIEQAHGTGYGGSGFKFNEEEEE 942
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKS-GGDISHQD-SIAKIATIAAASNSKASA 458
K +KAQAKEYGF EDKSDSED ++ RK+ GG+IS Q + A+IA IAAA+ + A+A
Sbjct: 943 VRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQQQATFAQIAAIAAAAKAAAAA 1002
Query: 459 STPSLISVAQLLPNGGPSIPLPGVLGLSVP 488
+ ++ QLL NGG +PGVL ++VP
Sbjct: 1003 PVSAPVTANQLLANGGGLAAMPGVLPVTVP 1032
>sp|Q0J7Y8|RH45_ORYSJ DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp.
japonica GN=Os08g0154200 PE=3 SV=2
Length = 947
Score = 267 bits (683), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/274 (53%), Positives = 178/274 (64%), Gaps = 46/274 (16%)
Query: 54 DYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLDL 109
D E FMKR KK K +K + SKI +YQ RKN Y + ++IT M+ YRK L+L
Sbjct: 216 DDEEFMKRVKKTKVEKLAIVDHSKI--EYQPFRKNLYIEVKDITMMTGEEVATYRKNLEL 273
Query: 110 KIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGS 169
K+ K PKPIKTW Q+GLT+K+L+T KL E P+ IQA A +I+SG D + I +TGS
Sbjct: 274 KVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGS 333
Query: 170 GKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------- 210
GKTLAF+LPMLRH+ +QPPVVPG D P+GL+MAPT ELV Q
Sbjct: 334 GKTLAFVLPMLRHVKDQPPVVPG-DGPIGLIMAPTRELVVQIHSDIKKFAKSLGINCVAI 392
Query: 211 -----------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
+++R GRMID+LC + KITNL RVT+LV+DEADRMFDMGF
Sbjct: 393 YGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGF 452
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
EPQITRIVQN RPDRQ VLFS FP +VEILARK
Sbjct: 453 EPQITRIVQNTRPDRQTVLFSAIFPRQVEILARK 486
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/135 (50%), Positives = 85/135 (62%), Gaps = 4/135 (2%)
Query: 306 LELVINFDAPNDYEDYVHHCCQSW---LKSCAFRFISEENAIYATDLVKAFELSELVVRD 362
LELV+N+D PN YEDYVH ++ K A FIS+E YA DL KA ELSE V
Sbjct: 582 LELVVNYDVPNHYEDYVHRVGRTGHAGRKGFAVTFISDEEERYAPDLAKALELSEQAVPQ 641
Query: 363 DLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKAQAKEYGFGEDKSDS 422
DLK +AD F+AKV G Q HGTG+GG + + +KAQA+EYG+ EDKSDS
Sbjct: 642 DLKGLADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDEARRSAKKAQAREYGYEEDKSDS 701
Query: 423 E-DVDEGTRKSGGDI 436
+ D + G RK+GGD+
Sbjct: 702 DSDEEGGVRKAGGDL 716
>sp|Q4TVV3|DDX46_DANRE Probable ATP-dependent RNA helicase DDX46 OS=Danio rerio GN=ddx46
PE=2 SV=1
Length = 1018
Score = 216 bits (551), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 120/281 (42%), Positives = 165/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSPA----Y 103
+S+ + E+ ++ A + K R++++ KI Y+ RKNFY + E+ RMSP Y
Sbjct: 262 YSSEEEEVDLQTALTGFQTKQRKVLEPVDHQKIQYEPFRKNFYVEVPELARMSPEEVSEY 321
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +L+ + ++ K PKPIKTW Q G++ K+L K N+E P IQA A I+SG D +
Sbjct: 322 RLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDLI 381
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q PV + P+ ++M PT EL Q
Sbjct: 382 GIAKTGSGKTIAFLLPMFRHILDQRPVGEA-EGPLAVIMTPTRELALQITKECKKFSKSL 440
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+V+DEAD
Sbjct: 441 ALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEAD 500
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 501 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARR 541
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 23/206 (11%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K+L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 634 KNGACRLLVATSVAARGLDVKQLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 693
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQV--HGTGHGGVALNLMKRR 398
A Y+ D++KA ELS V +L+ + +F + G++ +G G +
Sbjct: 694 GQARYSGDILKALELSGSSVPAELEQLWTNF-KEQQKAEGKIIKSSSGFSGKGFKFDETE 752
Query: 399 IRRGKQLRKAQAKEYGFGEDKSDSE----DVDE------GTRKSGGDISHQDSIAK---- 444
+ +K Q ++ G SD E D+DE ++K D S S++
Sbjct: 753 HALANERKKLQ--KWALGLHDSDDEDTALDIDEQIESMFNSKKRVKDFSAPGSVSAGSAG 810
Query: 445 -IATIAAASNSKASASTPSLISVAQL 469
++ +A + S STPS ++ +L
Sbjct: 811 GVSGSVSAVSGLGSLSTPSAGNIQKL 836
>sp|Q1DHB2|PRP5_COCIM Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Coccidioides
immitis (strain RS) GN=PRP5 PE=3 SV=1
Length = 1197
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 181/328 (55%), Gaps = 60/328 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHS-----------ASDYEL--FMKR 61
EIDPLDAFM+ ++ S + +R P ++ + A D+E F+
Sbjct: 437 EIDPLDAFMSGLKDSVTVDASK-YRKNVSKPKQEPEAIFGDEDDVDLKAMDFEADDFLAI 495
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
K ++ K+ + + IDY+ RK+FYT+ ++ ++ A R +LD +K+R
Sbjct: 496 TSKTRKKKDLPTVNHET-IDYEPFRKSFYTEPVDLAELNDEEVAALRLELDGIKVRGVDV 554
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q GL + L+ KL +E P +IQ+ A I+SG D + + +TGSGKT+AFL
Sbjct: 555 PKPVQKWSQCGLGVQTLDVIRKLGYEQPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFL 614
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 615 LPMFRHIKDQRP-LENMEGPVGLIMTPTRELATQIHKECKPFLKALNLRAVCAYGGAPIK 673
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 674 DQIAELKRGAEIIVCTPGRMIDLLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 733
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT 285
+ NIRP RQ VLFS TFP +E LARKT
Sbjct: 734 ISNIRPSRQTVLFSATFPRNMEALARKT 761
Score = 83.2 bits (204), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++E
Sbjct: 858 KAGIFPVLIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 917
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 918 EQERYSVDIAKALKQSGQSVPEAVQKMVDSFLEKVKSGKEKASASGFGGKGLERL 972
>sp|Q2HAD8|PRP5_CHAGB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Chaetomium
globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 /
NBRC 6347 / NRRL 1970) GN=PRP5 PE=3 SV=1
Length = 1064
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 129/332 (38%), Positives = 179/332 (53%), Gaps = 62/332 (18%)
Query: 12 VQIEIDPLDAFMNDMECSFAEHPNNCF------RLGRRLPAEDSHSASDY---------E 56
V ++DPLDAFM D+E + + + G+ E S DY
Sbjct: 302 VDEDVDPLDAFMADLEQTGSAGGIGSVPARQKQKAGKGFEPEAYFSDDDYGYEEDKADPS 361
Query: 57 LFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKI 111
+ A KKK+ I SKI+++ Q+RKNF+ + +E+++M+ R +LD +K+
Sbjct: 362 SILAMASKKKKKDIPTIDYSKIELN--QIRKNFWVEPQELSQMTEDDIADLRLELDGIKV 419
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGK 171
K PKP++ W Q GLT IL+ L +E P +IQ A +I+SG D + + +TGSGK
Sbjct: 420 SGKNVPKPVQKWSQCGLTRPILDVVEGLGYEKPTSIQMQALPVIMSGRDVIGVAKTGSGK 479
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------- 210
T+AF+LPMLRHI +Q PV GDD + L+M PT EL Q
Sbjct: 480 TMAFVLPMLRHIKDQDPVT-GDDGAIALIMTPTRELCTQIYSDLLPFAKALKLRAIAAYG 538
Query: 211 ---------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252
+++R GRMIDLL N ++TNL R TYLVLDEADRMFDMGFEP
Sbjct: 539 GNAIKDQIAELKRGAEIIVATPGRMIDLLAANSGRVTNLKRATYLVLDEADRMFDMGFEP 598
Query: 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
Q+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 599 QVMKIFNNVRPDRQTILFSATMPRIIDALTKK 630
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 77/145 (53%), Gaps = 10/145 (6%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A FI+E
Sbjct: 726 KKGVCPIMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 785
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR--- 397
E A + KA E S V + L + ++ KV G + +G GG L + +
Sbjct: 786 EQENCAPGIAKALEQSGQPVPEQLNEMRKAWKEKVKTGKAK-DASGFGGKGLERLDKERE 844
Query: 398 --RIRRGKQLRKAQAKEYGFGEDKS 420
R+R ++ KA+ +E F E+++
Sbjct: 845 AARVRE-RKTHKAEGEEDDFKEEET 868
>sp|Q4IP34|PRP5_GIBZE Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Gibberella
zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL
31084) GN=PRP5 PE=3 SV=2
Length = 1207
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/373 (36%), Positives = 197/373 (52%), Gaps = 62/373 (16%)
Query: 2 PETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMK- 60
PE T+ + ++DPLDAFM D++ + P + E S +Y+ K
Sbjct: 445 PEPATQMEVDEEDDVDPLDAFMADLKQTDVRQPTKTSTTQKIQEPEAYFSDDEYDFNKKD 504
Query: 61 ----------RAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQ 106
AK+KK+D I SKI+I + +RKNF+ + E++ ++ A R +
Sbjct: 505 EGDASALLAITAKRKKKDIP-TIDYSKIEI--EPIRKNFWHEPAELSLLTEAEVADLRLE 561
Query: 107 LD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAIT 165
LD +K+ K PKP++ W Q GLT + L+ L +E P IQ A ++SG D + +
Sbjct: 562 LDGIKVNGKDVPKPVQKWAQCGLTRQTLDVVDNLGYEKPTPIQMQALPALMSGRDVIGVA 621
Query: 166 ETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL------------------ 207
+TGSGKT+AFLLPM RHI +QPP + D P+GL+M PT EL
Sbjct: 622 KTGSGKTVAFLLPMFRHIKDQPP-LKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLR 680
Query: 208 ---------VRQQVRR------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246
+R+Q+ GRMIDLL N ++TNL RVTY+VLDEADRMF
Sbjct: 681 AVCAYGGAPIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLKRVTYVVLDEADRMF 740
Query: 247 DMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKEL 306
DMGFEPQ+ +I N+RPDRQ +LFS T P ++ L +K V I +V R + KE+
Sbjct: 741 DMGFEPQVMKIFANMRPDRQTILFSATMPRIIDSLTKK--VLKNPIEVTVGGRSVVAKEI 798
Query: 307 ELVINF-DAPNDY 318
E ++ D P+ +
Sbjct: 799 EQIVEVRDEPSKF 811
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LVIN+DAPN EDYVH ++ A F++
Sbjct: 874 KKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTP 933
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A + KA E S + D L + + KV G + +G GG L+ + + R
Sbjct: 934 EQENCAPGIAKALEQSGQPIPDRLNEMRKAHREKVKSGKAK-DTSGFGGKGLDRLDQE-R 991
Query: 401 RGKQLRK 407
+LR+
Sbjct: 992 EAARLRE 998
>sp|A6RW79|PRP5_BOTFB Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Botryotinia
fuckeliana (strain B05.10) GN=prp5 PE=3 SV=1
Length = 1151
Score = 212 bits (540), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 130/329 (39%), Positives = 176/329 (53%), Gaps = 60/329 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRL---PAEDSHSASDYELFMKR---------- 61
EIDPLDAFM +M F+ NN + + P E D ++ +K
Sbjct: 430 EIDPLDAFMEEMGDPFSLPKNNATFIKDNIKSQPQEPEPLFGDDDVDLKALDADPDEILA 489
Query: 62 -AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKC 115
A K ++ K+ I +D RKNFYT+ E+ M+ A R +LD +K+ K
Sbjct: 490 IANKARKKKDIPTINYSA-LDLPPFRKNFYTEPTELAEMTEAEIADLRLELDGIKVAGKD 548
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP++ W Q GL K L+ +KL +E P +IQ A I+SG D + + +TGSGKT+AF
Sbjct: 549 VPKPVQKWSQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAF 608
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +Q P + G D P+GL+M PT EL Q
Sbjct: 609 LLPMFRHIRDQRP-LKGSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAII 667
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
++R GRMI+LL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +
Sbjct: 668 KDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMK 727
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+ NIRP+RQ +LFS T P ++ LA+KT
Sbjct: 728 VFNNIRPNRQTILFSATMPRIMDALAKKT 756
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+NFDAPN EDYVH ++ A FI+E
Sbjct: 851 KAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 910
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLG 378
E Y+ + KA E S V D L + S+ KV G
Sbjct: 911 EQEQYSVGIAKALEQSGQEVPDRLNEMRKSYKDKVKSG 948
>sp|A2QQA8|PRP5_ASPNC Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=prp5 PE=3 SV=2
Length = 1180
Score = 211 bits (538), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 144/378 (38%), Positives = 196/378 (51%), Gaps = 74/378 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSH-------SASDYELFMKR 61
EIDPLDAFM+++ S + R + D H D + F+
Sbjct: 424 EIDPLDAFMSELAESAPPKKKVGAKFSRTKEQQPEALFGDEHDIDMTAVGDGDADDFLAI 483
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
A K K+ K+ + K K++Y+ RK FYT+ ++ +MS + R +LD +K+R
Sbjct: 484 ANKAKKKKDIPAVDHK-KVEYETFRKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDV 542
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W Q GL + L+ KL +E +IQA A I+SG D + + +TGSGKT+AFL
Sbjct: 543 PKPVQKWSQCGLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFL 602
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+PM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 603 IPMFRHIKDQRP-LDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 661
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 662 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 721
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK- 304
+ NIRPDRQ VLFS TFP +E LARKT +V I V R D+K
Sbjct: 722 MANIRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEVRNDDQKF 781
Query: 305 --ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 782 VRLLELLGNLYSSDENED 799
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 846 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 905
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + D+F+ KV G + +G GG L +
Sbjct: 906 DQERYSVDIAKALKQSGQKVPEPVQKLVDAFLEKVKAGKEKASASGFGGKGLERL 960
>sp|Q9P7C7|PRP11_SCHPO Pre-mRNA-processing ATP-dependent RNA helicase prp11
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp11 PE=3 SV=1
Length = 1014
Score = 209 bits (533), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 132/352 (37%), Positives = 185/352 (52%), Gaps = 65/352 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE--DSHSASDYELFMKRAKKK------- 65
E+DPLDA+M + + + R G L E D ++ D + + ++
Sbjct: 301 EVDPLDAYMASLVGT-----TDTIRPGL-LNTEVIDPNANDDERMVISETLEEEENLLAL 354
Query: 66 --KRDKNREIIK-SKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAP 117
KR K +++I KI+Y+ +K+FY + E+ +SPA R LD +KIR P
Sbjct: 355 AAKRSKKKDVITVDHSKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCP 414
Query: 118 KPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLL 177
KP+ +W Q GL+ + + + L +E P +IQA A I SG D + + +TGSGKT+AFLL
Sbjct: 415 KPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLL 474
Query: 178 PMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR----------------------- 214
PM RHI +Q P+ G + P+ ++M PT EL Q R
Sbjct: 475 PMFRHIKDQRPLKTG-EGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKD 533
Query: 215 ----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
GRMID+L N ++TNL R TYLVLDEADRMFD+GFEPQ+ RI+
Sbjct: 534 QIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRII 593
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
NIRPDRQ VLFS TFP +E LARK V + +V R + E+E ++
Sbjct: 594 NNIRPDRQTVLFSATFPRAMEALARK--VLKKPVEITVGGRSVVASEVEQIV 643
Score = 79.0 bits (193), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V ++ IA SV ARGLD K L+LV+N+D PN EDYVH ++ A FI+
Sbjct: 715 KAGVFDVLIATSVVARGLDVKSLQLVVNYDCPNHMEDYVHRVGRTGRAGHTGVAVTFITP 774
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN-LMKRRI 399
E YA D+ KA ++S+ V +L+ +A F+ KV G + G G GG L+ L + R
Sbjct: 775 EQEKYAVDIAKALKMSKQPVPKELQTLASQFLEKVKAGKEKAAGGGFGGKGLSRLDETRN 834
Query: 400 RRGKQLRKAQAKEYGFGEDKSDSEDVDEGT--------RKSGGDISHQDSIAKIATIAAA 451
K RKA +GED+ D E E KS GD + A + IAA
Sbjct: 835 AERKMQRKA------YGEDEEDVETEAEAKSPLEKITPEKSTGDPTLDRVRAAVGGIAAR 888
Query: 452 SNSKASASTPSLISVAQLLPNGG 474
+ + +A + L ++ G
Sbjct: 889 AFANQTAQSNKLTQPISIIKTDG 911
>sp|Q0D1K3|PRP5_ASPTN Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
terreus (strain NIH 2624 / FGSC A1156) GN=prp5 PE=3 SV=1
Length = 1181
Score = 208 bits (530), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 122/301 (40%), Positives = 169/301 (56%), Gaps = 60/301 (19%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
K++Y+ RK FYT+ ++ +MS + R +LD +K+R PKP++ W Q GL + L
Sbjct: 502 KMEYEPFRKKFYTEPSDLAQMSEGELASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTL 561
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +L +ENP +IQ+ A I+SG D + + +TGSGKT+AFL+PM RHI +Q P +
Sbjct: 562 DVIDRLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRP-LENM 620
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ P+GL+M PT EL Q +++R
Sbjct: 621 EGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIAELKRGAEIVVCTP 680
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ N+RPDRQ VLFS TF
Sbjct: 681 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANVRPDRQTVLFSATF 740
Query: 275 PPRVEILARKT------------NVCNLSIANSVRARGLDEK---ELELVINFDAPNDYE 319
P +E LARKT +V I V R D+K LEL+ N + ++ E
Sbjct: 741 PRNMEALARKTLNKPVEIVVGGKSVVAPEITQIVEVRNEDKKFVRLLELLGNLYSSDENE 800
Query: 320 D 320
D
Sbjct: 801 D 801
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 848 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 907
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ ++ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 908 DQERFSVDIAKALKQSGQKVPEPVQQMVDSFLEKVKAGKEKASASGFGGKGLERL 962
>sp|Q7SH33|PRP5_NEUCR Pre-mRNA-processing ATP-dependent RNA helicase prp-5 OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=prp-5 PE=3 SV=1
Length = 1194
Score = 208 bits (529), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 130/332 (39%), Positives = 172/332 (51%), Gaps = 62/332 (18%)
Query: 12 VQIEIDPLDAFMNDME--CSFAEHPNNCFRLGRR----LPAEDSHSASDYEL-------- 57
V E+DPLDAFM +E S E + L + +P E S DY
Sbjct: 434 VDDEVDPLDAFMAGLEQTASGEESHSKADTLTEKKNGNIPPEAYFSDDDYGYEADGTDPT 493
Query: 58 -FMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQL-----DLKI 111
+ A KKK+ I SK+ D +RKNF+ + E++ MS +L +K+
Sbjct: 494 SILAMASKKKKKDIPTIDYSKL--DLNPIRKNFWVEPYELSHMSEEELAELRLELDGIKV 551
Query: 112 REKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGK 171
K PKP++ W Q GLT IL+T L E P IQ A +I+SG D + + +TGSGK
Sbjct: 552 SGKNIPKPVQKWSQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGK 611
Query: 172 TLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ--------------------- 210
T+AF LPMLRH+ +Q PV GDD + L+M PT EL Q
Sbjct: 612 TMAFALPMLRHVKDQDPVT-GDDGAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYG 670
Query: 211 ---------QVRRG---------RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252
+++RG R+IDLL NG ++TNL R TYLVLDEADRMFDMGFEP
Sbjct: 671 GNAIKDQIAELKRGAEIIVATPGRLIDLLAANGGRVTNLKRATYLVLDEADRMFDMGFEP 730
Query: 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
Q+ +I N+RPDRQ +LFS T P ++ L +K
Sbjct: 731 QVMKIFNNVRPDRQTILFSATMPRIIDALTKK 762
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 4/167 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K VC + IA S+ ARGLD K+L+LVIN+DAPN EDYVH ++ A FI+E
Sbjct: 858 KKGVCPILIATSIAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 917
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
E A+ + KA E S V D L + ++ KV G + +G GG L + +
Sbjct: 918 EQENCASGIAKALEQSGQPVPDRLNEMRKAWKEKVKAGKAK-DASGFGGKGLEKLDKDRE 976
Query: 401 RGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGGDISHQDSIAKIAT 447
+ + K G +D + ++G +K ++ Q +++ I +
Sbjct: 977 AARMRERKTHKAEGEEDDVKEDAPAEDGEKKDKTKVAIQSAVSAIVS 1023
>sp|Q4WT99|PRP5_ASPFU Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=prp5 PE=3 SV=1
Length = 1211
Score = 208 bits (529), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/340 (37%), Positives = 183/340 (53%), Gaps = 59/340 (17%)
Query: 3 ETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSHSA---- 52
E+ ++ + E+DPLDAFM+++ + R + + D H
Sbjct: 440 ESEKMEVDAAEEEVDPLDAFMSELAETAPPKKTTGARFTKAKDQQPEAMFGDEHDVDLTA 499
Query: 53 ---SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRK 105
D + F+ A K K+ K+ + + K++Y+ RK FYT+ + M+ + R
Sbjct: 500 VGEGDADDFLAIANKAKKKKDIPTVDHE-KMEYEPFRKKFYTEPSNLAEMTDEEAASLRL 558
Query: 106 QLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAI 164
+LD +K+R PKP+ W Q GL + L+ KL +ENP +IQ+ A I+SG D + +
Sbjct: 559 ELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIQKLGYENPTSIQSQAIPAIMSGRDVIGV 618
Query: 165 TETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------- 210
+TGSGKT+AFL+PM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 619 AKTGSGKTIAFLIPMFRHIRDQRP-LENMEGPIGLIMTPTRELATQIHKDCKPFLKALNL 677
Query: 211 ----------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRM 245
+++R GRMIDLL N ++TNL RVTY+VLDEADRM
Sbjct: 678 RAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRM 737
Query: 246 FDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
FDMGFEPQ+ +I+ NIRPDRQ VLFS TFP +E LARK+
Sbjct: 738 FDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKS 777
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 874 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 933
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 934 EQERYSVDIAKALRQSGQKVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERL 988
>sp|A1D373|PRP5_NEOFI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=prp5 PE=3 SV=1
Length = 1193
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 127/340 (37%), Positives = 183/340 (53%), Gaps = 59/340 (17%)
Query: 3 ETTTKQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE------DSHSA---- 52
E+ ++ + E+DPLDAFM+++ + R + + D H
Sbjct: 422 ESEKMEVDAAEEEVDPLDAFMSELAETAPPKKTTGARFAKAKEQQPEAMFGDEHDVDLTA 481
Query: 53 ---SDYELFMKRAKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRK 105
D + F+ A K K+ K+ + + K++Y+ RK FYT+ + M+ + R
Sbjct: 482 VGEGDADDFLAIANKAKKKKDIPAVDHE-KMEYEPFRKKFYTEPSNLAEMTDEEAASLRL 540
Query: 106 QLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAI 164
+LD +K+R PKP+ W Q GL + L+ +L +ENP +IQ+ A I+SG D + +
Sbjct: 541 ELDGIKVRGVDVPKPVMKWSQCGLGVQTLDVIHRLGYENPTSIQSQAIPAIMSGRDVIGV 600
Query: 165 TETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------- 210
+TGSGKT+AFL+PM RHI +Q P + + P+GL+M PT EL Q
Sbjct: 601 AKTGSGKTIAFLIPMFRHIRDQRP-LENMEGPIGLIMTPTRELATQIHKDCKPFLKALNL 659
Query: 211 ----------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRM 245
+++R GRMIDLL N ++TNL RVTY+VLDEADRM
Sbjct: 660 RAVCAYGGAPIKDQIAELKRGAEIVVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRM 719
Query: 246 FDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKT 285
FDMGFEPQ+ +I+ NIRPDRQ VLFS TFP +E LARK+
Sbjct: 720 FDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKS 759
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 856 KAGIFPILIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 915
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 916 EQERYSVDIAKALRQSGQKVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERL 970
>sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus
GN=Ddx46 PE=1 SV=1
Length = 1032
Score = 206 bits (525), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus GN=Ddx46
PE=1 SV=2
Length = 1032
Score = 206 bits (524), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46
PE=1 SV=2
Length = 1031
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 164/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E LAR+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARR 573
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>sp|Q2U2J6|PRP5_ASPOR Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=prp5 PE=3 SV=1
Length = 1186
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 194/378 (51%), Gaps = 74/378 (19%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE-------------DSHSASDYELFMKR 61
E+DPLDAFM+++ S + + P + + D + F+
Sbjct: 431 EVDPLDAFMSELAESAPPKKTAGAKFAKAKPQQPEALFGDENDMDMTAVGDGDADDFLAI 490
Query: 62 AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCA 116
A K K+ K+ + K K++Y+ RK FYT+ ++ MS + R +LD +K+R
Sbjct: 491 ANKAKKKKDIPTVDHK-KVEYEPFRKKFYTEPSDLAAMSEEEAASLRLELDGIKVRGVEV 549
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
P+P+ W Q GL + L+ +L + P +IQA A I+SG D + + +TGSGKT+AFL
Sbjct: 550 PRPVSKWSQCGLGVQTLDVIDRLGYSAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFL 609
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
+PM RHI +Q P + + PVGL+M PT EL Q
Sbjct: 610 IPMFRHIKDQRP-LENMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIK 668
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 669 DQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKI 728
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARKT------------NVCNLSIANSVRARGLDEK- 304
+ N+RPD+Q VLFS TFP +E LARKT +V I V R D+K
Sbjct: 729 LANVRPDKQTVLFSATFPRNMEALARKTLNKPVEIVVGGRSVVAPEITQIVEVRSEDKKF 788
Query: 305 --ELELVINFDAPNDYED 320
LEL+ N + ++ ED
Sbjct: 789 IRLLELLGNLYSTDENED 806
Score = 81.6 bits (200), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 853 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 912
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 913 DQERYSVDIAKALKQSGQSVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERL 967
>sp|Q5BDW4|PRP5_EMENI Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=prp5 PE=3 SV=1
Length = 1173
Score = 206 bits (523), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 128/326 (39%), Positives = 177/326 (54%), Gaps = 57/326 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAE----DSHSAS-------DYELFMKRAK 63
E+DPLDAFM+++ S + + E D H S D E F+ A
Sbjct: 420 ELDPLDAFMSELAESAPPKKKAGAKFSKAQEPEAIFGDEHDVSMTAVGEGDAEDFLAIAS 479
Query: 64 KKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPK 118
K K+ K+ + K++Y+ R+ FYT+ ++ +MS R +LD +K+R PK
Sbjct: 480 KAKKKKDIPTVDHN-KVEYEPFRRKFYTEPSDLAQMSEEEAANLRLELDGIKVRGLDVPK 538
Query: 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLP 178
P++ W Q GL + L+ KL + +IQA A I+SG D + + +TGSGKT+AFL+P
Sbjct: 539 PVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIP 598
Query: 179 MLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ---------------------------- 210
M RHI +Q P + + P+GL+M PT EL Q
Sbjct: 599 MFRHIKDQRP-LENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQ 657
Query: 211 --QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQ 259
+++R GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+
Sbjct: 658 IAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKILS 717
Query: 260 NIRPDRQAVLFSPTFPPRVEILARKT 285
N+RPDRQ VLFS TFP +E LARKT
Sbjct: 718 NVRPDRQTVLFSATFPRNMEALARKT 743
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 840 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 899
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
+ Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 900 DQERYSVDIAKALKQSGQEVPEAVQKLVDSFLEKVKAGKEKASNSGFGGKGLERL 954
>sp|A4RN46|PRP5_MAGO7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Magnaporthe
oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
GN=PRP5 PE=3 SV=1
Length = 1012
Score = 204 bits (520), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 172/327 (52%), Gaps = 58/327 (17%)
Query: 15 EIDPLDAFMNDM-ECSF--AEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNR 71
E+DPLDAFM D+ E SF A P + LP +++ + D E +
Sbjct: 254 EVDPLDAFMADLTEPSFGPASKPVKTLSSAKVLPTPEAYFSDDDEFGASTKEGVDAKAIM 313
Query: 72 EIIKSKIK-----IDYQQL-----RKNFYTQAREITRMSPA----YRKQLD-LKIREKCA 116
+ + K IDY +L RKNF+ + E++ M+ A R +LD +K+ K
Sbjct: 314 AMAAKRKKKEIPTIDYSKLDIVPVRKNFWVEPYELSEMTEAEVAELRLELDGIKVSGKDV 373
Query: 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
PKP++ W GLT IL+ +KL ++ P AIQ A +I+SG D V + +TGSGKT+AFL
Sbjct: 374 PKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFL 433
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVR----------------------- 213
LPM RHI +Q P V ++ P+GL++ PT EL Q R
Sbjct: 434 LPMFRHIKDQEP-VKDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPPIK 492
Query: 214 ----------------RGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
GRMIDLL N ++ +L R TY+VLDEADRMFDMGFEPQ+ +I
Sbjct: 493 DQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQVMKI 552
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
N+RPDRQ VLFS T P ++ L +K
Sbjct: 553 FANVRPDRQTVLFSATMPKIMDALVKK 579
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 4/117 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K+ VC + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 675 KSGVCPVMIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFVTE 734
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
E A + KA E S V + L + +F KV G + +G GG L + +
Sbjct: 735 EQENCAIGIAKALEQSGQPVPEKLIEMRKAFREKVKAGKAKDQ-SGFGGKGLEKLDK 790
>sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii GN=DDX46
PE=2 SV=1
Length = 1032
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 163/281 (58%), Gaps = 47/281 (16%)
Query: 50 HSASDYELFMKRAKKKKRDKNREIIK--SKIKIDYQQLRKNFYTQAREITRMSP----AY 103
+S+ + E+ ++ A + K R++++ KI+Y+ RKNFY + E+ +MS +
Sbjct: 294 YSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVF 353
Query: 104 RKQLD-LKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSV 162
R +++ + ++ K PKPIK+W Q G++ KIL + K +E P IQ A I+SG D +
Sbjct: 354 RLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLI 413
Query: 163 AITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------ 210
I +TGSGKT+AFLLPM RHI +Q + G + P+ ++M PT EL Q
Sbjct: 414 GIAKTGSGKTIAFLLPMFRHIMDQRSLEEG-EGPIAVIMTPTRELALQITKECKKFSKTL 472
Query: 211 ------------------QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEAD 243
+++R GRMID+L N ++TNL RVTY+VLDEAD
Sbjct: 473 GLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEAD 532
Query: 244 RMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284
RMFDMGFEPQ+ RIV N+RPDRQ V+FS TFP +E L R+
Sbjct: 533 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALVRR 573
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K C L +A SV ARGLD K L LV+N+ PN YEDYVH ++ K A+ FI+E
Sbjct: 666 KNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITE 725
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSF 371
+ A YA D++KA ELS V DL+ + F
Sbjct: 726 DQARYAGDIIKALELSGTAVPPDLEKLWSDF 756
>sp|A7ENE0|PRP5_SCLS1 Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=prp5
PE=3 SV=1
Length = 1114
Score = 203 bits (516), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/329 (38%), Positives = 175/329 (53%), Gaps = 60/329 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRL---GRRLPAEDSHSASDYELFMKR---------- 61
EIDPLDAFM +M F+ +N + + P E D ++ +K
Sbjct: 359 EIDPLDAFMEEMGDPFSLPKSNTTFVKNNTKSQPQEPEALFGDDDVDLKALDADPDEILA 418
Query: 62 -AKKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKC 115
A K ++ K+ I + ++ RKNFYT+ E+ M+ A R +LD +K+ K
Sbjct: 419 IANKARKKKDIPTI-NYANLNLPPFRKNFYTEPAELVDMTEAEINDLRLELDGIKVAGKD 477
Query: 116 APKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAF 175
PKP++ W Q GL K L+ KL ++ P +IQ A I+SG D + + +TGSGKT+AF
Sbjct: 478 VPKPVQKWSQCGLDVKSLDVIKKLGYDKPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAF 537
Query: 176 LLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ------------------------- 210
LLPM RHI +Q P + D P+GL+M PT EL Q
Sbjct: 538 LLPMFRHIRDQRP-LKNSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAII 596
Query: 211 -----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITR 256
++R GRMI+LL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +
Sbjct: 597 KDQIADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMK 656
Query: 257 IVQNIRPDRQAVLFSPTFPPRVEILARKT 285
+ NIRP+RQ +LFS T P ++ LA+KT
Sbjct: 657 VFNNIRPNRQTILFSATMPRIMDALAKKT 685
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA SV ARGLD K+L+LV+NFDAPN EDYVH ++ A FI+E
Sbjct: 780 KAGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITE 839
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
E Y+ + KA E S V + L + S+ KV G + +G GG L
Sbjct: 840 EQEQYSVGIAKALEQSGQEVPERLNEMRKSYKDKVKSG-AKKESSGFGGKGL 890
>sp|Q0UN57|PRP5_PHANO Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 /
FGSC 10173) GN=PRP5 PE=3 SV=2
Length = 1184
Score = 201 bits (512), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 133/381 (34%), Positives = 195/381 (51%), Gaps = 67/381 (17%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAED---SHSASDYELFMKRAKKKKRDKNR 71
++DPLDAFM D+ S + P+ G + +D +A + E + KK+ K
Sbjct: 433 DVDPLDAFMADL--SVPQQPSRAAPQGETMFNDDLEPEQTAVEGEDLLALRAAKKKKKEV 490
Query: 72 EIIKSKIKIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQT 126
I + K++Y+ RK+FYT+ EIT+MS R +LD +K++ P+P+ W Q
Sbjct: 491 PTINHE-KVEYEPFRKDFYTEPAEITQMSAEDVADLRHELDGIKVKPDDVPRPVTKWAQM 549
Query: 127 GLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQ 186
GL + ++ F+++ + P AIQA A + SG D + + +TGSGKTLAF +PM+RH+ +Q
Sbjct: 550 GLLQQTMDVFTRVGYARPTAIQAQAIPIAESGRDLIGVAKTGSGKTLAFGIPMIRHVLDQ 609
Query: 187 PPVVPGDDSPVGLVMAPTGELVRQQVRR-------------------------------- 214
P+ P D P+GL++APT EL Q V
Sbjct: 610 RPLKPA-DGPIGLILAPTRELSLQIVNELKPFLNASGITIKCAYGGQPISDQIAMIKRGG 668
Query: 215 --------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQ 266
GR+IDLL N ++ + R+TY+VLDEADRMFDMGFEPQ+ +I+ +IRPDRQ
Sbjct: 669 IHILCATAGRLIDLLQSNSGRVLSFRRITYVVLDEADRMFDMGFEPQVMKILASIRPDRQ 728
Query: 267 AVLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYV---- 322
+LFS TFP + LARK + R++ E + I P YE +
Sbjct: 729 TILFSATFPKTMAALARKALDKPAEVIIGGRSKVAPEITQHITI---VPPSYEKKIAKLL 785
Query: 323 HHCCQSWLKSCAFRFISEENA 343
HH Q+ F +ENA
Sbjct: 786 HHLGQT--------FSDDENA 798
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + N+ IA SV ARGLD L LV NFD P EDYVH C ++ K A I
Sbjct: 845 KQGLLNILIATSVAARGLDVPGLALVYNFDCPTHLEDYVHRCGRTGRAGNKGLAVTLIEN 904
Query: 341 ENAI-YATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALN------ 393
+A +VKA + S V DDL+A+A++F KV G + + G G L+
Sbjct: 905 PGQERFAVHIVKALKESGAEVPDDLQAMANAFHEKVKSGTEKYYNVGFKGKGLDELDASR 964
Query: 394 -LMKRRIRRGKQL 405
L K+R +R +L
Sbjct: 965 ALDKKREKRALKL 977
>sp|Q553B1|DDX46_DICDI ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum
GN=helB1 PE=2 SV=1
Length = 1151
Score = 201 bits (512), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 110/248 (44%), Positives = 142/248 (57%), Gaps = 44/248 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
I Y + +KNFY + + M+ +R +L +KI K PKPI++W Q GLT K+
Sbjct: 464 IKYAEFQKNFYIEVPVLANMTETEVLDFRSELGVKITGKDCPKPIQSWAQAGLTEKVHLL 523
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E P +IQA I++G D + I TGSGKTLAFLLPM RHI QP PG +
Sbjct: 524 LKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHILAQPKSAPG-EG 582
Query: 196 PVGLVMAPTGELVRQ------------------------------QVRR---------GR 216
+ L+M+PT EL Q +++R GR
Sbjct: 583 MIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGASISEQIAELKRGADIVVCTPGR 642
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
MID+LC N +ITNL RVT+LVLDEADRMFDMGF PQI IV +IRPDRQ ++FS TFPP
Sbjct: 643 MIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQINCIVDSIRPDRQTIMFSATFPP 702
Query: 277 RVEILARK 284
+VE +A+K
Sbjct: 703 KVENVAKK 710
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 10/134 (7%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K V + IA + +RGLD K+L LV+NFD P+ EDYVH ++ + A+ FI+
Sbjct: 803 KNKVKTILIATPLASRGLDIKDLNLVVNFDCPDHLEDYVHRVGRTGRAGNRGTAYTFITP 862
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAK------VNLGLGQVHGTGHGGVALNL 394
+ +++ ++KA E S V D+L+ + D++ K V L G GH A
Sbjct: 863 DEERFSSSIIKALEQSGSKVPDELRKLNDTYEKKRKEGKDVLLAPTGFTGRGHKFDAAEE 922
Query: 395 MKRRIRRGKQLRKA 408
K+ I R KQ RKA
Sbjct: 923 DKKNIER-KQQRKA 935
>sp|A1CQA9|PRP5_ASPCL Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=prp5 PE=3 SV=1
Length = 1192
Score = 201 bits (511), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 108/250 (43%), Positives = 148/250 (59%), Gaps = 45/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
K++Y+ RK FYT+ + +M+ + R +LD +K+R PKP++ W Q GL + L
Sbjct: 510 KVEYEPFRKKFYTEPSNLAQMTDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQAL 569
Query: 134 ETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ +L +E+P +IQ+ A I+SG D + + +TGSGKT+AFL+PM RHI +Q P +
Sbjct: 570 DVIERLGYESPTSIQSQAIPAIMSGRDVIGVAKTGSGKTVAFLIPMFRHIKDQRP-LDNM 628
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRR--------- 214
+ P+GL+M PT EL Q ++R
Sbjct: 629 EGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIVVCTP 688
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GRMIDLL N ++TNL RVTY+VLDEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TF
Sbjct: 689 GRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATF 748
Query: 275 PPRVEILARK 284
P +E LARK
Sbjct: 749 PRNMEALARK 758
Score = 82.8 bits (203), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISE 340
K + + IA SV ARGLD K+L+LV+N+DAPN EDYVH ++ A F++E
Sbjct: 856 KAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTE 915
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLM 395
E Y+ D+ KA + S V + ++ + DSF+ KV G + +G GG L +
Sbjct: 916 EQERYSVDIAKALKQSGQQVPEPVQKMVDSFLEKVKAGKEKASASGFGGKGLERL 970
>sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=PRP5 PE=3 SV=1
Length = 1156
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/275 (41%), Positives = 148/275 (53%), Gaps = 46/275 (16%)
Query: 80 IDYQQLRKNFYTQAREITRMSPAYRKQLDLK-----IREKCAPKPIKTWRQTGLTTKILE 134
IDY+ K FY EI MS Q+ L+ +R + PKP+ W GL L+
Sbjct: 430 IDYEPFNKAFYHPPAEIQDMSEELANQIRLEMDAITVRGRDCPKPLTKWSHCGLPASCLD 489
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+L + P IQ+ A I+SG D + + +TGSGKT+AFLLPM RHI +Q PV P +
Sbjct: 490 VIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHIKDQRPVEPSE- 548
Query: 195 SPVGLVMAPTGELVRQQVRR---------------------------------------G 215
PVG++M PT EL Q R G
Sbjct: 549 GPVGIIMTPTRELAVQIYREMRPFIKALGLRAACVYGGAPISEQIAEMKKTADIVVATPG 608
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+IDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+ +I+ NIRPDRQ VLFS TFP
Sbjct: 609 RLIDLLTANSGRVTNLYRVTYLVLDEADRMFDMGFEPQVMKILNNIRPDRQTVLFSATFP 668
Query: 276 PRVEILARKTNVCNLSIANSVRARGLDEKELELVI 310
++E LARK + N + +V R + E+E ++
Sbjct: 669 KQMESLARKV-LKNKPLEITVGGRSVVAAEIEQIV 702
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 70/125 (56%), Gaps = 6/125 (4%)
Query: 293 ANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIYATDL 349
A SV ARGLD K+L+LVIN+D PN EDYVH ++ K FI+ E YA D+
Sbjct: 783 ATSVAARGLDVKQLKLVINYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDI 842
Query: 350 VKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQLRKAQ 409
+ A + S V +L+A+A SF K+ G + G+G GG L+ + + R K L KAQ
Sbjct: 843 IAALKASAAHVPPELEAMAASFKEKLAAGKAKAAGSGFGGKGLDRFE--LDREKTL-KAQ 899
Query: 410 AKEYG 414
YG
Sbjct: 900 KSAYG 904
>sp|Q6BML1|PRP5_DEBHA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=PRP5 PE=3 SV=2
Length = 913
Score = 197 bits (502), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/251 (43%), Positives = 150/251 (59%), Gaps = 46/251 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+I Y RK+FYT+ EI+++ R +LD +K+R +PI W Q GL + I+
Sbjct: 269 QIQYHPFRKDFYTEPTEISKLPEEEVANLRLKLDGIKVRGVNCTRPIIRWSQLGLPSTIM 328
Query: 134 ETF-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
+LN+ +P +IQA A I+SG D + + +TGSGKTL+F+LP+LRHI +QPP+ G
Sbjct: 329 SIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHIQDQPPLKKG 388
Query: 193 DDSPVGLVMAPTGELVRQ------------------------------QVRR-------- 214
D P+GL+M PT EL Q ++++
Sbjct: 389 -DGPIGLIMTPTRELALQIHKELNHFTKKLNISSCCCFGGSSIESQIAELKKGAQIIVGT 447
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+IDLL N ++TNL RVTYLVLDEADRMFDMGFEPQ+T++ +RPDRQ VLFS T
Sbjct: 448 PGRIIDLLAANSGRVTNLQRVTYLVLDEADRMFDMGFEPQVTKVFTRVRPDRQTVLFSAT 507
Query: 274 FPPRVEILARK 284
FP ++E+LA+K
Sbjct: 508 FPRKMELLAKK 518
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 12/140 (8%)
Query: 288 CNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAI 344
N+ IA S+ ARGLD K L LVIN++A + EDYVH ++ K A F+S +
Sbjct: 627 VNILIATSIAARGLDVKGLNLVINYEAASHMEDYVHRVGRTGRAGRKGTAITFVSSKQGR 686
Query: 345 YATDLVKAFELSELVVRDDLK----AVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIR 400
TDLVKA LS+ V D++ ++ F+ V G + + G G L+ + + IR
Sbjct: 687 AITDLVKAMRLSK-VSEDEINPRLIEISTKFLEGVKSG-KEKYNFGFSGKGLDNL-QEIR 743
Query: 401 RGKQLRKAQAKEYGFGEDKS 420
R + K YG D S
Sbjct: 744 ESN--RDLERKVYGEENDSS 761
>sp|P0CQ98|PRP5_CRYNJ Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=PRP5 PE=3 SV=1
Length = 1072
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 176/346 (50%), Gaps = 61/346 (17%)
Query: 18 PLDAFMNDMECSFAE-HPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREIIKS 76
PLDAFM D E + + R+G R+ AED + +++ K + + + +
Sbjct: 284 PLDAFMRDNVQQVVEVNKADAKRMGLRV-AEDGSDDENQGQVVEKDKLAEAEALLQQAAA 342
Query: 77 KI-----------KIDYQQLRKNFYTQAREITRM----SPAYRKQLD-LKIREKCAPKPI 120
K KIDY+ RK FY E+ M + R ++D +KIR + APKP+
Sbjct: 343 KSRKKDLPPPDHSKIDYEPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPV 402
Query: 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPML 180
+ W GL L+ E P +IQA A I+SG D + I +TGSGKT+AFLLPML
Sbjct: 403 RNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPML 462
Query: 181 RHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR-------------------------- 214
RH+ +Q PV G + P+ +VM+PT EL Q +
Sbjct: 463 RHVRDQRPVS-GSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIA 521
Query: 215 -------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI 261
GRMIDLL N ++TN+ R TY+V+DEADRMFDMGFEPQ+ +I+ N+
Sbjct: 522 AMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNV 581
Query: 262 RPDRQAVLFSPTFPPRVEILARKTNVCNLSI---ANSVRARGLDEK 304
RP Q VLFS TFP +E LAR+ V L I SV A +D++
Sbjct: 582 RPSAQKVLFSATFPKTMESLARRILVKPLEITVGGRSVVAPEIDQR 627
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A SV ARGLD KEL+LVIN+DAPN EDYVH ++ K FI+ E ++ D
Sbjct: 711 VATSVAARGLDVKELKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVD 770
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+V+A E S+ + DDLK ++DSF+ K+ G + G+G+ G L
Sbjct: 771 IVRALEASKAFIPDDLKKMSDSFLGKIKSGKARAAGSGYSGKGL 814
>sp|P0CQ99|PRP5_CRYNB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=PRP5 PE=3 SV=1
Length = 1072
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/346 (36%), Positives = 176/346 (50%), Gaps = 61/346 (17%)
Query: 18 PLDAFMNDMECSFAE-HPNNCFRLGRRLPAEDSHSASDYELFMKRAKKKKRDKNREIIKS 76
PLDAFM D E + + R+G R+ AED + +++ K + + + +
Sbjct: 284 PLDAFMRDNVQQVVEVNKADAKRMGLRV-AEDGSDDENQGQVVEKDKLAEAEALLQQAAA 342
Query: 77 KI-----------KIDYQQLRKNFYTQAREITRM----SPAYRKQLD-LKIREKCAPKPI 120
K KIDY+ RK FY E+ M + R ++D +KIR + APKP+
Sbjct: 343 KSRKKDLPPPDHSKIDYEPFRKAFYVPPVEVLEMDEEEAELVRLEMDGIKIRGQDAPKPV 402
Query: 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPML 180
+ W GL L+ E P +IQA A I+SG D + I +TGSGKT+AFLLPML
Sbjct: 403 RNWGAFGLPQGCLDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPML 462
Query: 181 RHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR-------------------------- 214
RH+ +Q PV G + P+ +VM+PT EL Q +
Sbjct: 463 RHVRDQRPVS-GSEGPIAVVMSPTRELASQIYKECQPFLKVLNIRASCCVGGSSISEDIA 521
Query: 215 -------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI 261
GRMIDLL N ++TN+ R TY+V+DEADRMFDMGFEPQ+ +I+ N+
Sbjct: 522 AMKKGAEVVICTPGRMIDLLTANNGRVTNVRRTTYIVMDEADRMFDMGFEPQVMKIINNV 581
Query: 262 RPDRQAVLFSPTFPPRVEILARKTNVCNLSI---ANSVRARGLDEK 304
RP Q VLFS TFP +E LAR+ V L I SV A +D++
Sbjct: 582 RPSAQKVLFSATFPKTMESLARRILVKPLEITVGGRSVVAPEIDQR 627
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A SV ARGLD KEL+LVIN+DAPN EDYVH ++ K FI+ E ++ D
Sbjct: 711 VATSVAARGLDVKELKLVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVD 770
Query: 349 LVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL 392
+V+A E S+ + DDLK ++DSF+ K+ G + G+G+ G L
Sbjct: 771 IVRALEASKAFIPDDLKKMSDSFLGKIKSGKARAAGSGYSGKGL 814
>sp|A5DDF4|PRP5_PICGU Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PRP5 PE=3 SV=2
Length = 862
Score = 189 bits (480), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 144/250 (57%), Gaps = 46/250 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAPKPIKTWRQTGLTTKIL 133
+++Y +RK FYT E+ + P A R +D +K+R P PI+ W Q GL + I+
Sbjct: 219 QMEYTSVRKKFYTPPEELKDVPPEKVTALRTAMDGIKVRGSDCPMPIQKWAQLGLPSSIM 278
Query: 134 ETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192
KL ++ P IQ+ A I+SG D + + TGSGKTLAF++P++RHI +QPP+ G
Sbjct: 279 TVLEEKLGYDTPSPIQSQALPAIMSGRDIIGVANTGSGKTLAFVIPLIRHIMDQPPLKSG 338
Query: 193 DDSPVGLVMAPTGELVRQ------------------------------QVRR-------- 214
D P+G+++ PT EL Q ++R
Sbjct: 339 -DGPIGVILTPTRELALQIQKELVNFTQAVELSVCCCYGGSPIESQIADLKRGTEIIVGT 397
Query: 215 -GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273
GR+IDLL NG ++TNL R T+LVLDEADRMFDMGFEPQ+ +++ IRPD+Q VLFS T
Sbjct: 398 PGRVIDLLAANGGRVTNLRRTTFLVLDEADRMFDMGFEPQVNKVLSQIRPDKQMVLFSAT 457
Query: 274 FPPRVEILAR 283
FP ++E LAR
Sbjct: 458 FPKKLESLAR 467
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 286 NVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL-----KSCAFRFISE 340
N + IA S+ ARGLD + L LVIN+DAP+ EDYVH ++ + S+
Sbjct: 572 NGLRVLIATSIAARGLDVRGLNLVINYDAPSHMEDYVHRVGRTGRAGATGTAVTLVLSSQ 631
Query: 341 ENAIYATDLVKAFELSELV--VRDDLKAVADSFIAKVNLGLGQVHGTGHGGVAL-NLMKR 397
E I DLV+A ++S V + +L+++AD F+ KV G + + +G GG L NL +R
Sbjct: 632 EREIR--DLVRAMKMSGKVDDIPAELQSIADKFLKKVKSGEEKFN-SGFGGKGLENLQER 688
Query: 398 RIRRGKQLRKAQAKEYG 414
R +R+ + + YG
Sbjct: 689 R----DNVREIEMQMYG 701
>sp|Q6CCZ1|PRP5_YARLI Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PRP5 PE=3 SV=1
Length = 974
Score = 185 bits (470), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 119/326 (36%), Positives = 165/326 (50%), Gaps = 60/326 (18%)
Query: 15 EIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDSHSASDYELFMKRAKK----KKRDKN 70
E+DPLDA+M+ + + P E+ + + K K
Sbjct: 266 EVDPLDAYMSSLTLPT----TTSVSIADSTPLENLNVWEQVDTLEKSQDPTLDLSALSKR 321
Query: 71 REI-IKSKIKIDYQQLRKNFYTQAREITRMSPAYRKQLDL-----KIREKCAPKPIKTWR 124
+EI I K Y+ R+ FY ++ E+ M+ A +L L KIR K PKPI W
Sbjct: 322 KEIAIVDHSKQVYEDFRRQFYVESSELADMTEAETNELRLSLDGIKIRGKDCPKPISKWT 381
Query: 125 QTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIW 184
Q GL + + L ++ P +IQA A ++SG D +++ +TGSGKTLAFLLPMLRHI
Sbjct: 382 QLGLPGPTMGVLNDLRYDKPTSIQAQAIPAVMSGRDVISVAKTGSGKTLAFLLPMLRHIK 441
Query: 185 EQPPV------VPGDDS-PVGLVMAPTGELVRQQVRR----------------------- 214
+ V + G S P+G+++ PT EL Q R
Sbjct: 442 HRVGVETHTTTLSGASSHPLGVIITPTRELCVQIYRDLRPFLAALELTAVCAYGGSPIKD 501
Query: 215 ----------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIV 258
GRMIDLL N ++ +L+RVT+LV+DEADRMFDMGFEPQ+ ++
Sbjct: 502 QIAALKKGTHIIVCTPGRMIDLLAANQGRVLSLSRVTFLVIDEADRMFDMGFEPQVLKLT 561
Query: 259 QNIRPDRQAVLFSPTFPPRVEILARK 284
Q+IRPDRQ VLFS TFP ++E LAR+
Sbjct: 562 QSIRPDRQTVLFSATFPKKMEQLARR 587
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISE 340
K+ + ++ IA SV ARGLD K L LV+N+D+PN EDYVH ++ K A F+
Sbjct: 711 KSGLVSVLIATSVAARGLDVKGLGLVVNWDSPNHMEDYVHRVGRTGRAGQKGTALTFLLS 770
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMK--RR 398
+ A ++ +A + S ++ + + F KV G + H G G L ++ R
Sbjct: 771 DQERLAAEISRAIKSSGNAPPAPVQLMTERFEFKVRSGTEKRHMYGFSGKGLERLQDERD 830
Query: 399 IRRGKQLRKAQAKEYGFGEDKSDS 422
R + R + E G E +S +
Sbjct: 831 ATREHERRAYEGDEAGEAETESST 854
>sp|A3LQ55|PRP5_PICST Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=PRP5 PE=3 SV=2
Length = 875
Score = 181 bits (460), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 172/327 (52%), Gaps = 60/327 (18%)
Query: 15 EIDPLDAF---MNDMECSFAEHPNNCFRLGRRLPAEDSHSASD---------YELFMKRA 62
+ID LD F ++ E S + P+ +L E+ + D EL +
Sbjct: 151 KIDELDDFIASLSKQESSSNDIPSQIIE-DEQLEVENEGDSEDEEIDQDKKQQELLSSKF 209
Query: 63 KKKKRDKNREIIKSKIKIDYQQLRKNFYTQAREITRMSP----AYRKQLD-LKIREKCAP 117
+K + +K E I ++Y RKNFY + EI + + R +LD +K+ P
Sbjct: 210 QKLQNEKQLETIDHST-MNYSDFRKNFYQEPSEIQNWTAEQVESIRLELDGIKVAGSNVP 268
Query: 118 KPIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176
+P+ W GL + KL ++ P +IQ+ A I+SG D + + +TGSGKTL+F+
Sbjct: 269 RPVLKWSHLGLPASYMNIIEDKLEYKAPTSIQSQALPAIMSGRDIIGVAKTGSGKTLSFV 328
Query: 177 LPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-------------------------- 210
LPMLRHI +QP + G + P+GL+++PT EL Q
Sbjct: 329 LPMLRHIQDQPDLKDG-EGPIGLILSPTRELAVQIHKEITNFTKRLGMTACCCYGGSPIE 387
Query: 211 ----QVRR---------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRI 257
++++ GR+I+LL N +ITNL RVTY+VLDEADRMFD+GFEPQ+T+I
Sbjct: 388 SQIAELKKGAQILVGTPGRIIELLAANSGRITNLRRVTYVVLDEADRMFDLGFEPQVTKI 447
Query: 258 VQNIRPDRQAVLFSPTFPPRVEILARK 284
IRP+ Q VLFS TFP ++E+LA++
Sbjct: 448 SSQIRPESQTVLFSATFPRKIELLAKR 474
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 84/160 (52%), Gaps = 14/160 (8%)
Query: 281 LARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRF 337
+ K + ++ IA S+ ARGLD K L+LVIN+D PN EDYVH ++ +K A F
Sbjct: 576 FSSKDSGVDILIATSIAARGLDVKGLDLVINYDPPNHMEDYVHRVGRTGRAGMKGTAITF 635
Query: 338 ISEENAIYATDLVKAFELSEL---VVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNL 394
+S + TDLV+A +S++ + L + + F+ KV G + + G GG L
Sbjct: 636 VSSDQERSVTDLVRAMTMSKIPEDEIPSRLIEIRNQFLEKVKAGKFK-YSFGFGGKGLEK 694
Query: 395 MKRRIRRGKQLRKAQAKEYGFGEDKSDSEDVDEGTRKSGG 434
+ ++IR R Q KEYG +D +DV+ K+ G
Sbjct: 695 L-QQIR--DSTRSLQKKEYG----PNDDDDVNFVADKTNG 727
>sp|Q5ADL0|PRP5_CANAL Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=PRP5 PE=3
SV=1
Length = 884
Score = 172 bits (435), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 138/250 (55%), Gaps = 47/250 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSPAY----RKQLD-LKIREKCAPKPIKTWRQTGLTTKILET 135
+YQ+ RK FY +A E++ +S R+ LD +K++ P+PI W L T +
Sbjct: 248 NYQEFRKVFYREAYELSALSDEQVELIRQDLDNIKVKGTDVPRPILKWSHLALPTNLSSV 307
Query: 136 F-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
KL E P AIQ+ A I+SG D + I +TGSGKTL+++LPMLRHI +Q +
Sbjct: 308 IHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHIQDQ-QFSKDNQ 366
Query: 195 SPVGLVMAPTGELVRQ----------------------------QVRR------------ 214
P+GL+++PT EL Q Q+
Sbjct: 367 GPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIVGTP 426
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+IDLL N ++ NL R T++VLDEADRMFD+GFEPQ+ +I+ IRPDRQ VLFS TF
Sbjct: 427 GRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEPQVNKILTQIRPDRQTVLFSATF 486
Query: 275 PPRVEILARK 284
P ++E LA++
Sbjct: 487 PRKMETLAKQ 496
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRFISEENAIY 345
N+ IA S+ ARGLD + L LVINFD PN EDYVH ++ K A F+S
Sbjct: 608 NILIATSIAARGLDVRNLGLVINFDPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKE 667
Query: 346 ATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGK-Q 404
+LVKA +LS + L+ +A+ F+ KV G ++ +G GG L+ ++ +R K +
Sbjct: 668 VFNLVKALKLSHSDIDPKLEEIANKFVTKVKAGKEKI-SSGFGGKGLDNLQ-EVRDNKLK 725
Query: 405 LRKAQAKEYGFGEDKSDSEDVDEGTRKSGGD 435
L K + FG+ + + + T+KS +
Sbjct: 726 LEKQR-----FGDQQPQRQQEETETKKSNDE 751
>sp|O22907|RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana
GN=RH24 PE=1 SV=2
Length = 760
Score = 169 bits (427), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 154/283 (54%), Gaps = 50/283 (17%)
Query: 80 IDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILET 135
IDY+ + K+FY + I+ M+ YR++L +++ +P+KT+ G +++I+
Sbjct: 183 IDYEPINKDFYEELESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSA 242
Query: 136 FSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDS 195
K +E P AIQ A +++SG D + I +TGSGKT AF+LPM+ HI +QP + D+
Sbjct: 243 IKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPE-LQRDEG 301
Query: 196 PVGLVMAPTGELVRQ---------------------------QVRR------------GR 216
P+G++ APT EL Q Q + GR
Sbjct: 302 PIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGR 361
Query: 217 MIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPP 276
+ID+L +K + R +YLVLDEADRMFD+GFEPQ+ IV IRPDRQ +LFS T P
Sbjct: 362 LIDMLK---MKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPW 418
Query: 277 RVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAPNDYE 319
+VE LAR+ + + I +V G+ +++ V+N P+D E
Sbjct: 419 KVEKLARE--ILSDPIRVTVGEVGMANEDITQVVNV-IPSDAE 458
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSW----LK 331
R+E L + K+ V ++ IA V ARGLD K L+ V+N+D D + +VH ++
Sbjct: 512 RMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRD 571
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ +++ A +A +LV + EL++L ++D
Sbjct: 572 GVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDLAMKD 611
>sp|A5E058|PRP5_LODEL Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=PRP5 PE=3 SV=1
Length = 994
Score = 167 bits (422), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 138/250 (55%), Gaps = 46/250 (18%)
Query: 80 IDYQQLRKNFYTQAREITRMS----PAYRKQLD-LKIREKCAPKPIKTWRQTGLTTKILE 134
I+Y + RK+FY E++ M R +LD ++ R K P P TW Q + ++
Sbjct: 341 IEYPKFRKHFYQVPFEMSTMDNRELDMLRLELDNVRARGKNVPPPFLTWGQLLMPESVMS 400
Query: 135 TF-SKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193
+ L P IQ A +++SG D + + +TGSGKTL+++LPM+RHI +Q PG+
Sbjct: 401 VIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHIQDQLFPKPGE 460
Query: 194 DSPVGLVMAPTGELVRQ------------------------------QVRRG-------- 215
P+GLV++PT EL Q +++RG
Sbjct: 461 -GPIGLVLSPTRELALQIEKEILKFSSTMDLKVCCCYGGSNIENQISELKRGVNVIVATP 519
Query: 216 -RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
R+IDLL NG +IT L R T++VLDEADRMFDMGFEPQI +I IRPD+Q VLFS TF
Sbjct: 520 GRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGFEPQIQKIFTQIRPDKQTVLFSATF 579
Query: 275 PPRVEILARK 284
P ++E LA+K
Sbjct: 580 PRKLEQLAKK 589
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 289 NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKSC---AFRFISEENAIY 345
N+ IA S+ ARGLD + L+LV+NF+ P+ EDYVH ++ A F+
Sbjct: 698 NVLIATSIAARGLDVRNLDLVVNFEPPSHLEDYVHRVGRTGRAGKHGEAITFVDNTQEKE 757
Query: 346 ATDLVKAFELSELVVRDDLKAVADSFIAKVNLGLGQVHGTGHGGVALNLMKRRIRRGKQL 405
+ LVKA ++S V L+ +AD F+ K+ G + +G GG L ++ QL
Sbjct: 758 ISILVKALKMSSRAVDSKLQEIADKFMKKIESG-EEKRSSGFGGKGLEKLQNVRETNMQL 816
Query: 406 RKAQ----AKEYGFGEDKSDSEDVD 426
+K KE G + SE VD
Sbjct: 817 QKKMFGNFKKEDGKKSHRDLSEQVD 841
>sp|Q755N4|DBP2_ASHGO ATP-dependent RNA helicase DBP2 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=DBP2
PE=3 SV=2
Length = 557
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 147/280 (52%), Gaps = 58/280 (20%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY + ++ +MS +RK+ ++KI PKPI+T+ + G +L+ +
Sbjct: 73 KFEKNFYVEHEDVQKMSTDEVEQFRKENEMKIVGHDVPKPIRTFDEAGFPEYVLKEVKEE 132
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
E P AIQ + +SG D + + TGSGKTL++ LP + HI QP + PG D PV L
Sbjct: 133 GFEKPTAIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLSPG-DGPVVL 191
Query: 200 VMAPTGELV---------------------------RQQVRR------------GRMIDL 220
V+APT EL QQ+R GR+ID+
Sbjct: 192 VLAPTRELAVQIQKECSKFGRSSRIRNTCVYGGVPKSQQIRDLQRGVEILIATPGRLIDM 251
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
L + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +++S T+P V+
Sbjct: 252 L---EIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVQQ 308
Query: 281 LAR-------KTNVCNLSIANSVRARGLDEKELELVINFD 313
LAR + N+ +L +A S L +E+V +FD
Sbjct: 309 LARDYLHDPIQVNIGSLELAASHTITQL----VEVVSDFD 344
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V ARG+D K + VIN+D P + EDYVH ++ A F +E
Sbjct: 408 RTGRSPIMVATDVAARGIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTE 467
Query: 341 ENAIYATDLVKAFELSELVVRDDL 364
N L+ ++ + DL
Sbjct: 468 ANKTLGAQLISIMREAKQEIPQDL 491
>sp|P0CQ76|DBP2_CRYNJ ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP2 PE=3 SV=1
Length = 540
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 134/251 (53%), Gaps = 52/251 (20%)
Query: 80 IDYQ-----QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
ID+Q + KNFY Q +T S A+R + ++KI+ K P+PI T+ + G
Sbjct: 60 IDWQNQSLAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPD 119
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
I+ ++ P +IQ A + +SG D VAI ETGSGKT++F LP + HI QP +
Sbjct: 120 YIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLA 179
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ L++APT EL Q Q+R
Sbjct: 180 PG-DGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICV 238
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS
Sbjct: 239 ATPGRLIDMLETGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFS 295
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 296 ATWPKEVQRLA 306
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + +A V +RGLD +++ VIN+D PN+ EDY+H ++ K ++ + +
Sbjct: 403 KSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTM 462
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+N+ A +LV+ S+ + +L+ +A
Sbjct: 463 DNSKAARELVQILRESKADIPPELEEMA 490
>sp|P0CQ77|DBP2_CRYNB ATP-dependent RNA helicase DBP2-A OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP2 PE=3 SV=1
Length = 540
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/251 (40%), Positives = 134/251 (53%), Gaps = 52/251 (20%)
Query: 80 IDYQ-----QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTT 130
ID+Q + KNFY Q +T S A+R + ++KI+ K P+PI T+ + G
Sbjct: 60 IDWQNQSLAKFEKNFYVQDPRVTARSDAEVEAFRAEKEMKIQGKNVPRPITTFEEAGFPD 119
Query: 131 KILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190
I+ ++ P +IQ A + +SG D VAI ETGSGKT++F LP + HI QP +
Sbjct: 120 YIMSEIRRMGFTAPSSIQCQAWPMALSGRDLVAIAETGSGKTISFCLPAMVHINAQPLLA 179
Query: 191 PGDDSPVGLVMAPTGELVRQ---------------------------QVRR--------- 214
PG D P+ L++APT EL Q Q+R
Sbjct: 180 PG-DGPIVLILAPTRELAVQIQTEATKFGQSSRIRNTAIYGGAPKGPQIRDLQRGVEICV 238
Query: 215 ---GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271
GR+ID+L TNL RVTYLV+DEADRM DMGFEPQI +IV IRPDRQ +LFS
Sbjct: 239 ATPGRLIDMLETGK---TNLKRVTYLVMDEADRMLDMGFEPQIRKIVSQIRPDRQTLLFS 295
Query: 272 PTFPPRVEILA 282
T+P V+ LA
Sbjct: 296 ATWPKEVQRLA 306
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + +A V +RGLD +++ VIN+D PN+ EDY+H ++ K ++ + +
Sbjct: 403 KSGRSPIMLATDVASRGLDVRDIGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTM 462
Query: 341 ENAIYATDLVKAFELSELVVRDDLKAVA 368
+N+ A +LV+ S+ + +L+ +A
Sbjct: 463 DNSKAARELVQILRESKADIPPELEEMA 490
>sp|Q10MH8|RH24_ORYSJ DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp.
japonica GN=Os03g0308500 PE=2 SV=1
Length = 770
Score = 162 bits (410), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 125/390 (32%), Positives = 184/390 (47%), Gaps = 92/390 (23%)
Query: 15 EIDPLDAFMNDMECSF-------------------AEHPNNCFRLGRR-----LPAEDSH 50
EIDPLDAFM +++ + P F ++ L A+ H
Sbjct: 67 EIDPLDAFMAEIQEEIRAPPPAPKPEALRRADSDDEDDPVESFLRAKKDSGLALAADAMH 126
Query: 51 SASDYELFMKRAKKK--------KRDKNREII-KSKIK---------IDYQQLRKNFYTQ 92
+ D + + A K D N ++ K KI+ I+Y+ K+FY +
Sbjct: 127 AGYDSDEEVYAAAKAVDAGMMEYDSDDNPIVVDKKKIEPIPPLDHSTIEYEPFNKDFYEE 186
Query: 93 AREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQ 148
++ MS Y K L +++ P+PIK++ G +++ +K +E P IQ
Sbjct: 187 KPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAKQGYEKPTTIQ 246
Query: 149 APASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELV 208
A +++SG D + I +TGSGKT AF+LPM+ HI +QP + ++ P+G+V APT EL
Sbjct: 247 CQALPIVLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPE-LEKEEGPIGVVCAPTRELA 305
Query: 209 RQ---------------------------QVRR------------GRMIDLLCKNGVKIT 229
Q Q + GR+IDLL +K
Sbjct: 306 HQIYLEAKKFAKPYNLRVAAVYGGVSKFDQFKELKAGCEIVIATPGRLIDLLKMKALK-- 363
Query: 230 NLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCN 289
+ R TYLVLDEADRMFD+GFEPQI IV IRPDRQ +LFS T P +VE LAR+ +
Sbjct: 364 -MFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLLFSATMPYKVERLARE--ILT 420
Query: 290 LSIANSVRARGLDEKELELVINFDAPNDYE 319
I +V G ++++ V+N P+D E
Sbjct: 421 DPIRVTVGQVGSANEDIKQVVNV-LPSDAE 449
Score = 41.2 bits (95), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 14/100 (14%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL----K 331
R+E L + K+ V ++ +A V ARGLD K ++ V+NFD + + ++H ++
Sbjct: 503 RMETLQKFKSGVYHVLVATDVAARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDKD 562
Query: 332 SCAFRFISEENAIYATDLVKAF---------ELSELVVRD 362
A+ I+++ +A +LV EL +L ++D
Sbjct: 563 GTAYTLITQKEVRFAGELVHCLIAAGQDVPNELMDLAMKD 602
>sp|A7TJK8|PRP5_VANPO Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
70294) GN=PRP5 PE=3 SV=1
Length = 872
Score = 162 bits (410), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/248 (36%), Positives = 139/248 (56%), Gaps = 46/248 (18%)
Query: 81 DYQQLRKNFYTQAREITRMSPAYRKQLDL-----KIREKCAPKPIKTWRQTGLTTKILET 135
D + K+FY++ E+ M+ +++ L K++ K PK I W Q GL T I+
Sbjct: 231 DLEPFPKSFYSEPDEVKLMTDDEVEEMRLSLGGIKVKGKHCPKLITRWSQLGLPTDIMNL 290
Query: 136 FSK-LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
+K L ++ P AIQ+ A I+SG D + I++TGSGKT++++LPMLR I Q + +
Sbjct: 291 ITKELKYDEPTAIQSQAIPAIMSGRDLIGISKTGSGKTISYILPMLRQIKAQRTLSKNET 350
Query: 195 SPVGLVMAPTGEL---VRQQVRR------------------------------------- 214
P+GL++APT EL + ++V +
Sbjct: 351 GPLGLILAPTRELALQINEEVEKFTKQDRSIRTICCTGGSEMKKQINDLKRGVEIVVATP 410
Query: 215 GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274
GR+ID+L N K+ + R+T++V+DEADR+FDMGFEPQIT+I++ +RPD+Q VLFS TF
Sbjct: 411 GRLIDILTLNSGKLISTKRITFVVMDEADRLFDMGFEPQITQIMKTVRPDKQCVLFSATF 470
Query: 275 PPRVEILA 282
P ++ A
Sbjct: 471 PNKLRSFA 478
>sp|Q8W4R3|RH30_ARATH DEAD-box ATP-dependent RNA helicase 30 OS=Arabidopsis thaliana
GN=RH30 PE=2 SV=2
Length = 591
Score = 162 bits (409), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/245 (40%), Positives = 130/245 (53%), Gaps = 49/245 (20%)
Query: 84 QLRKNFYTQAREITRMS----PAYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
KNFY ++ + M+ YR + D+ + + PKP+K ++ ILE +KL
Sbjct: 124 HFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMKMFQDANFPDNILEAIAKL 183
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQA + + G D + I ETGSGKTLA+LLP L H+ Q P + DD P+ L
Sbjct: 184 GFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVHVSAQ-PRLGQDDGPIVL 242
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
++APT EL Q Q+R GR+ID+
Sbjct: 243 ILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRRGVEIVIATPGRLIDM 302
Query: 221 L-CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVE 279
L C++ TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ +L+S T+P VE
Sbjct: 303 LECQH----TNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREVE 358
Query: 280 ILARK 284
LAR+
Sbjct: 359 TLARQ 363
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 277 RVEILAR-KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKS 332
R +LA K+ + A V ARGLD K+++ V+N+D PN EDY+H ++ K
Sbjct: 449 RDRVLAEFKSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKG 508
Query: 333 CAFRFISEENAIYATDLVKAFELSELVVRDDLKAV 367
AF F + +NA +A +LVK + + VV L A+
Sbjct: 509 MAFTFFTHDNAKFARELVKILQEAGQVVPPTLSAL 543
>sp|P24782|DBP2_SCHPO ATP-dependent RNA helicase dbp2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp2 PE=2 SV=2
Length = 550
Score = 161 bits (408), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 98/242 (40%), Positives = 129/242 (53%), Gaps = 47/242 (19%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
+K+FY + + S A YRK+ ++ + PKP+ T+ + G +L+ +L
Sbjct: 82 FQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHGLNVPKPVTTFEEAGFPNYVLKEVKQLG 141
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
E P IQ A + +SG D V I+ TGSGKTL++ LP + HI QP + PG D P+ LV
Sbjct: 142 FEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLSPG-DGPIVLV 200
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR++D+L
Sbjct: 201 LAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIRDLIRGVEICIATPGRLLDML 260
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
N TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ V+FS T+P V+ L
Sbjct: 261 DSNK---TNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTVMFSATWPKEVQRL 317
Query: 282 AR 283
AR
Sbjct: 318 AR 319
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
+T + +A V +RG+D K + V N+D P + EDYVH ++ K A+ + +
Sbjct: 416 RTGKSPIMVATDVASRGIDVKGITHVFNYDFPGNTEDYVHRIGRTGRAGAKGTAYTYFTS 475
Query: 341 ENAIYATDLV 350
+NA A +LV
Sbjct: 476 DNAKQARELV 485
>sp|Q5QMN3|RH20_ORYSJ DEAD-box ATP-dependent RNA helicase 20 OS=Oryza sativa subsp.
japonica GN=Os01g0197200 PE=3 SV=2
Length = 494
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/243 (39%), Positives = 130/243 (53%), Gaps = 47/243 (19%)
Query: 84 QLRKNFYTQAREITRMSP----AYRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKL 139
+ KNFY ++ + M+ AYR++ ++ + + PKP++ +R G +L+ +K
Sbjct: 50 RFEKNFYVESPSVAGMTEEEVEAYRRRREITVEGRDVPKPVREFRDVGFPEYVLQEITKA 109
Query: 140 NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199
P IQ+ + + G D + I ETGSGKTLA+LLP + H+ QP + PG D P+ L
Sbjct: 110 GFVEPTPIQSQGWPMALRGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILAPG-DGPIVL 168
Query: 200 VMAPTGELVRQ---------------------------QVRR------------GRMIDL 220
V+APT EL Q QVR GR+ID+
Sbjct: 169 VLAPTRELAVQIQQEATKFGASSKIKSTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDM 228
Query: 221 LCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEI 280
+ + TNL RVTYLVLDEADRM DMGFEPQI +IV IRPDRQ + +S T+P VE
Sbjct: 229 IESHH---TNLRRVTYLVLDEADRMLDMGFEPQIKKIVSQIRPDRQTLYWSATWPKEVEQ 285
Query: 281 LAR 283
LAR
Sbjct: 286 LAR 288
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH---HCCQSWLKSCAFRFISE 340
K+ + A V ARGLD K+++ VIN+D P EDYVH ++ K A+ F +
Sbjct: 383 KSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTA 442
Query: 341 ENAIYATDLVKAFE 354
NA +A DL+ E
Sbjct: 443 ANARFAKDLINILE 456
>sp|A6ZLH6|PRP5_YEAS7 Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Saccharomyces cerevisiae (strain YJM789) GN=PRP5 PE=3
SV=1
Length = 849
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 176/351 (50%), Gaps = 58/351 (16%)
Query: 7 KQLPVVQIEIDPLDAFMNDMECSFAEHPNNCFRLGRRLPAEDS----HSASDYELFMKRA 62
+++P E DPLD FM ++ + + G L ED D ++
Sbjct: 126 QKVPEHDNEKDPLDEFMTSLKEEKMSNSKGMYDRGDILDVEDQLFELGGTDDEDVEDNTD 185
Query: 63 KKKKRDKNREIIKSKIKIDY------QQLRKNFYTQAREITRMSPAYRKQL-----DLKI 111
+ K ++K Y + +KNFY ++ ++ MS ++L ++KI
Sbjct: 186 NSNIAKIAKLKAKKRVKQIYYSPEELEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKI 245
Query: 112 REKCAPKPIKTWRQTGLTTKILETFS-KLNHENPVAIQAPASALIISGLDSVAITETGSG 170
+ PKP+ W Q GL+T + + KL+ + IQ+ A I+SG D + I++TGSG
Sbjct: 246 KGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSG 305
Query: 171 KTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL---VRQQVRR------------- 214
KT+++LLP+LR + Q P+ + P+GL++APT EL + ++V +
Sbjct: 306 KTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCC 365
Query: 215 ------------------------GRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGF 250
GR ID+L N K+ + R+T++V+DEADR+FD+GF
Sbjct: 366 TGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGF 425
Query: 251 EPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSIANSVRARGL 301
EPQIT+I++ +RPD+Q VLFS TFP ++ A V + I+ ++ ++G+
Sbjct: 426 EPQITQIMKTVRPDKQCVLFSATFPNKLRSFA--VRVLHSPISITINSKGM 474
>sp|P21372|PRP5_YEAST Pre-mRNA-processing ATP-dependent RNA helicase PRP5
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP5 PE=1 SV=1
Length = 849
Score = 160 bits (405), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/263 (33%), Positives = 147/263 (55%), Gaps = 48/263 (18%)
Query: 85 LRKNFYTQAREITRMSPAYRKQL-----DLKIREKCAPKPIKTWRQTGLTTKILETFS-K 138
+KNFY ++ ++ MS ++L ++KI+ PKP+ W Q GL+T + + K
Sbjct: 214 FQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGTGCPKPVTKWSQLGLSTDTMVLITEK 273
Query: 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198
L+ + IQ+ A I+SG D + I++TGSGKT+++LLP+LR + Q P+ + P+G
Sbjct: 274 LHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMG 333
Query: 199 LVMAPTGEL---VRQQVRR-------------------------------------GRMI 218
L++APT EL + ++V + GR I
Sbjct: 334 LILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFI 393
Query: 219 DLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRV 278
D+L N K+ + R+T++V+DEADR+FD+GFEPQIT+I++ +RPD+Q VLFS TFP ++
Sbjct: 394 DILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKL 453
Query: 279 EILARKTNVCNLSIANSVRARGL 301
A V + I+ ++ ++G+
Sbjct: 454 RSFA--VRVLHSPISITINSKGM 474
>sp|Q810A7|DDX42_MOUSE ATP-dependent RNA helicase DDX42 OS=Mus musculus GN=Ddx42 PE=1 SV=3
Length = 929
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>sp|Q86XP3|DDX42_HUMAN ATP-dependent RNA helicase DDX42 OS=Homo sapiens GN=DDX42 PE=1 SV=1
Length = 938
Score = 159 bits (402), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
>sp|Q4PHU9|DBP2_USTMA ATP-dependent RNA helicase DBP2 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP2 PE=3 SV=2
Length = 552
Score = 159 bits (401), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 142/275 (51%), Gaps = 50/275 (18%)
Query: 85 LRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILETFSKLN 140
KNFY + ++ S + YR + I+ + PKP+ ++ + G IL K+
Sbjct: 90 FEKNFYVEDPRVSNRSDSEVQQYRASKQMTIQGQNVPKPVTSFDEAGFPDYILSEIKKMG 149
Query: 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200
P AIQ+ A + +SG D VAI ETGSGKT+ F LP + HI QP + PG D P+ L+
Sbjct: 150 FSEPSAIQSQAWPMALSGRDLVAIAETGSGKTIGFALPAMVHINAQPLLKPG-DGPIALI 208
Query: 201 MAPTGELVRQ---------------------------QVRR------------GRMIDLL 221
+APT EL Q Q+R GR+ID++
Sbjct: 209 LAPTRELANQIQVECNRFGGSSRLRTCAVYGGVPKGPQIRDLQRGAEICIATPGRLIDMV 268
Query: 222 CKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEIL 281
TNL RVTYLV+DEADRM DMGFEPQI +I+Q IRPDRQ ++FS T+P V+ L
Sbjct: 269 DAGK---TNLRRVTYLVMDEADRMLDMGFEPQIRKILQQIRPDRQTLMFSATWPKEVQRL 325
Query: 282 ARK--TNVCNLSIANSVRARGLDEKE-LELVINFD 313
A N ++I ++ A + K+ +E+ F+
Sbjct: 326 AGDFLNNYAQVNIGSTELAANHNVKQIIEVCTEFE 360
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 284 KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHH---CCQSWLKSCAFRFISE 340
K+ + +A +V +RGLD K++ VIN+D P + EDYVH ++ A+ + +
Sbjct: 423 KSGRSPIMVATAVASRGLDVKDISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTP 482
Query: 341 ENAIYATDLV 350
EN+ A +L+
Sbjct: 483 ENSKSARELI 492
>sp|Q5R7D1|DDX42_PONAB ATP-dependent RNA helicase DDX42 OS=Pongo abelii GN=DDX42 PE=2 SV=1
Length = 942
Score = 158 bits (399), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 129/248 (52%), Gaps = 47/248 (18%)
Query: 79 KIDYQQLRKNFYTQAREITRMSPA----YRKQLDLKIREKCAPKPIKTWRQTGLTTKILE 134
+IDY KNFY + EIT ++P R +L+L++ P+P ++ G +++
Sbjct: 207 EIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQLMH 266
Query: 135 TFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD 194
K + P IQ + +SG D + I +TGSGKT AF+ PML HI +Q + PG D
Sbjct: 267 QIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEPG-D 325
Query: 195 SPVGLVMAPTGELVRQ---QVRR------------------------------------G 215
P+ +++ PT EL +Q + +R G
Sbjct: 326 GPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCTPG 385
Query: 216 RMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFP 275
R+ID + K K TNL RV+YLV DEADRMFDMGFE Q+ I ++RPDRQ +LFS TF
Sbjct: 386 RLIDHVKK---KATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFR 442
Query: 276 PRVEILAR 283
++E LAR
Sbjct: 443 KKIEKLAR 450
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 292 IANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATD 348
+A V ARGLD ++ VIN+D D + + H ++ K A+ ++ +++ +A D
Sbjct: 553 VATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYTLLTPKDSNFAGD 612
Query: 349 LVKAFELSELVVRDDL--KAVADSFIAKVNLGLGQVHGTGHGGVALNLMKR 397
LV+ E + V +L A+ +++ K G+ GG L +R
Sbjct: 613 LVRNLEGANQHVSKELLDLAMQNAWFRKSRFKGGKGKKLNIGGGGLGYRER 663
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,519,119
Number of Sequences: 539616
Number of extensions: 7953965
Number of successful extensions: 27493
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1115
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 23303
Number of HSP's gapped (non-prelim): 3631
length of query: 494
length of database: 191,569,459
effective HSP length: 122
effective length of query: 372
effective length of database: 125,736,307
effective search space: 46773906204
effective search space used: 46773906204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)