Query 042373
Match_columns 494
No_of_seqs 479 out of 2989
Neff 6.9
Searched_HMMs 13730
Date Mon Mar 25 09:21:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042373.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/042373hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2j0sa1 c.37.1.19 (A:22-243) P 100.0 2.6E-39 1.9E-43 310.9 15.9 171 111-290 7-216 (222)
2 d1veca_ c.37.1.19 (A:) DEAD bo 100.0 7.8E-39 5.7E-43 303.9 18.4 161 120-289 2-202 (206)
3 d2g9na1 c.37.1.19 (A:21-238) I 100.0 8.6E-39 6.3E-43 306.3 18.0 170 114-292 5-214 (218)
4 d1qdea_ c.37.1.19 (A:) Initiat 100.0 1.2E-38 9E-43 303.9 18.0 171 113-292 2-210 (212)
5 d1t6na_ c.37.1.19 (A:) Spliceo 100.0 7.8E-38 5.7E-42 297.2 15.2 155 121-284 1-197 (207)
6 d1wrba1 c.37.1.19 (A:164-401) 100.0 1.5E-36 1.1E-40 294.3 15.0 176 114-292 14-235 (238)
7 d1hv8a1 c.37.1.19 (A:3-210) Pu 100.0 3E-35 2.2E-39 279.2 16.1 155 120-284 3-196 (208)
8 d1s2ma1 c.37.1.19 (A:46-251) P 100.0 3.2E-35 2.4E-39 278.3 15.9 163 121-292 1-202 (206)
9 d1q0ua_ c.37.1.19 (A:) Probabl 100.0 4.2E-34 3E-38 270.2 15.9 157 121-286 1-200 (209)
10 d2bmfa2 c.37.1.14 (A:178-482) 99.9 1.1E-26 8E-31 229.0 9.7 170 155-339 6-298 (305)
11 d1oywa2 c.37.1.19 (A:1-206) Re 99.9 1.2E-24 9E-29 204.0 10.7 148 121-284 2-195 (206)
12 d1gkub1 c.37.1.16 (B:1-250) He 99.9 4E-25 2.9E-29 212.1 5.4 143 120-279 21-219 (237)
13 d2p6ra3 c.37.1.19 (A:1-202) He 99.9 4.6E-24 3.3E-28 199.8 12.3 144 128-284 10-191 (202)
14 d1wp9a1 c.37.1.19 (A:1-200) pu 99.8 1.3E-18 9.8E-23 160.9 13.3 128 142-281 8-173 (200)
15 d1fuka_ c.37.1.19 (A:) Initiat 99.7 7.8E-19 5.7E-23 159.2 7.4 103 265-367 52-160 (162)
16 d2j0sa2 c.37.1.19 (A:244-411) 99.7 2.5E-18 1.8E-22 156.8 9.5 80 285-364 82-164 (168)
17 d1s2ma2 c.37.1.19 (A:252-422) 99.7 1.1E-17 8.2E-22 152.6 11.6 102 264-365 56-163 (171)
18 d1oywa3 c.37.1.19 (A:207-406) 99.6 4.4E-16 3.2E-20 145.7 12.7 65 285-349 78-145 (200)
19 d1hv8a2 c.37.1.19 (A:211-365) 99.6 3.8E-16 2.8E-20 139.9 11.7 74 285-358 76-152 (155)
20 d2rb4a1 c.37.1.19 (A:307-474) 99.6 3.3E-16 2.4E-20 142.4 11.4 97 265-361 57-165 (168)
21 d1yksa1 c.37.1.14 (A:185-324) 99.6 8.8E-16 6.4E-20 132.1 9.0 106 156-275 5-140 (140)
22 d1t5la2 c.37.1.19 (A:415-595) 99.6 1.7E-15 1.2E-19 139.4 10.1 77 264-340 55-139 (181)
23 d1t5ia_ c.37.1.19 (A:) Spliceo 99.5 1.7E-14 1.2E-18 130.9 10.3 101 264-364 51-158 (168)
24 d1c4oa2 c.37.1.19 (A:410-583) 99.4 1.7E-13 1.2E-17 124.7 11.4 79 264-342 55-143 (174)
25 d2fz4a1 c.37.1.19 (A:24-229) D 99.4 1.3E-13 9.4E-18 128.7 9.8 109 143-274 70-205 (206)
26 d1rifa_ c.37.1.23 (A:) DNA hel 99.4 1.9E-13 1.4E-17 133.8 9.3 116 143-276 113-264 (282)
27 d1a1va1 c.37.1.14 (A:190-325) 99.4 3.3E-13 2.4E-17 117.0 6.9 98 158-274 8-136 (136)
28 d1jr6a_ c.37.1.14 (A:) HCV hel 99.4 4.2E-13 3E-17 117.9 7.2 56 285-342 76-137 (138)
29 d1wp9a2 c.37.1.19 (A:201-486) 99.4 6.8E-13 5E-17 129.4 9.6 59 285-343 217-277 (286)
30 d2eyqa3 c.37.1.19 (A:546-778) 99.3 1.4E-11 1E-15 117.0 17.5 144 127-284 39-223 (233)
31 d1gm5a3 c.37.1.19 (A:286-549) 99.2 1.6E-11 1.2E-15 118.7 12.0 141 134-290 75-256 (264)
32 d2p6ra4 c.37.1.19 (A:203-403) 99.2 1E-10 7.6E-15 108.5 13.4 133 195-343 40-188 (201)
33 d1gm5a4 c.37.1.19 (A:550-755) 99.1 1.1E-11 8.1E-16 115.7 4.0 87 263-349 63-156 (206)
34 d1gkub2 c.37.1.16 (B:251-498) 99.0 3E-11 2.2E-15 115.5 -0.1 62 285-350 67-136 (248)
35 d2fwra1 c.37.1.19 (A:257-456) 98.8 3.4E-09 2.5E-13 97.4 7.6 88 250-341 102-198 (200)
36 d1a1va2 c.37.1.14 (A:326-624) 98.5 2.2E-08 1.6E-12 97.0 3.9 70 285-354 94-171 (299)
37 d2eyqa5 c.37.1.19 (A:779-989) 98.4 6.7E-07 4.9E-11 82.6 12.5 84 258-341 51-141 (211)
38 d1z3ix2 c.37.1.19 (X:92-389) R 98.1 1.5E-05 1.1E-09 76.9 12.8 127 143-275 55-231 (298)
39 d1w36d1 c.37.1.19 (D:2-360) Ex 97.8 2.7E-05 1.9E-09 77.5 9.4 120 143-271 148-295 (359)
40 d1z63a1 c.37.1.19 (A:432-661) 97.8 5.6E-05 4.1E-09 69.7 10.5 115 143-274 12-162 (230)
41 d1yksa2 c.37.1.14 (A:325-623) 97.7 2.7E-05 2E-09 75.5 8.2 69 268-339 65-155 (299)
42 d1z3ix1 c.37.1.19 (X:390-735) 97.3 0.0012 8.8E-08 64.8 13.7 77 265-341 143-230 (346)
43 d1z5za1 c.37.1.19 (A:663-906) 97.2 0.00046 3.3E-08 64.1 8.6 75 267-341 113-197 (244)
44 d1tf5a4 c.37.1.19 (A:396-570) 96.7 0.0021 1.6E-07 56.8 8.6 57 286-342 81-148 (175)
45 d1tf5a3 c.37.1.19 (A:1-226,A:3 96.6 0.0033 2.4E-07 59.1 9.7 96 139-246 77-213 (273)
46 d1uaaa1 c.37.1.19 (A:2-307) DE 96.5 0.0011 8.2E-08 62.3 5.1 62 143-211 1-62 (306)
47 d1l8qa2 c.37.1.20 (A:77-289) C 96.2 0.0044 3.2E-07 56.3 7.4 85 160-261 38-126 (213)
48 d1ixza_ c.37.1.20 (A:) AAA dom 95.9 0.022 1.6E-06 52.7 11.1 108 119-247 4-115 (247)
49 d1sxjc2 c.37.1.20 (C:12-238) R 95.8 0.013 9.5E-07 52.6 8.6 47 121-183 11-59 (227)
50 d1sxje2 c.37.1.20 (E:4-255) Re 95.6 0.0082 6E-07 54.6 6.5 50 121-183 8-57 (252)
51 d1pjra1 c.37.1.19 (A:1-318) DE 95.4 0.01 7.5E-07 56.0 6.9 62 143-211 11-72 (318)
52 d1a5ta2 c.37.1.20 (A:1-207) de 95.4 0.014 9.9E-07 52.4 7.3 121 144-269 3-143 (207)
53 d1nkta3 c.37.1.19 (A:-15-225,A 95.4 0.02 1.5E-06 54.0 8.5 96 139-246 94-230 (288)
54 d1njfa_ c.37.1.20 (A:) delta p 95.3 0.077 5.6E-06 48.1 12.3 49 121-185 9-60 (239)
55 d1sxjb2 c.37.1.20 (B:7-230) Re 95.1 0.018 1.3E-06 51.7 7.2 127 121-273 12-140 (224)
56 d1lv7a_ c.37.1.20 (A:) AAA dom 95.1 0.016 1.2E-06 54.0 7.0 107 120-247 8-118 (256)
57 d2gnoa2 c.37.1.20 (A:11-208) g 95.0 0.042 3E-06 48.9 9.2 111 148-272 2-117 (198)
58 d1d2na_ c.37.1.20 (A:) Hexamer 94.6 0.059 4.3E-06 49.5 9.5 74 159-248 41-115 (246)
59 d1g6oa_ c.37.1.11 (A:) Hexamer 94.3 0.027 2E-06 54.2 6.3 66 134-209 138-207 (323)
60 d1j8yf2 c.37.1.10 (F:87-297) G 93.9 0.13 9.2E-06 46.3 9.8 113 161-282 15-146 (211)
61 d1ls1a2 c.37.1.10 (A:89-295) G 93.9 0.054 4E-06 48.7 7.2 54 231-284 90-144 (207)
62 d1r6bx2 c.37.1.20 (X:169-436) 93.9 0.078 5.7E-06 49.5 8.6 94 159-259 40-140 (268)
63 d1iqpa2 c.37.1.20 (A:2-232) Re 93.7 0.11 7.7E-06 46.4 9.0 43 121-176 21-63 (231)
64 d1ye8a1 c.37.1.11 (A:1-178) Hy 93.7 0.078 5.7E-06 44.8 7.6 40 231-271 97-136 (178)
65 d1r7ra3 c.37.1.20 (A:471-735) 93.6 0.079 5.7E-06 49.1 8.1 72 158-247 41-114 (265)
66 d2qy9a2 c.37.1.10 (A:285-495) 93.5 0.087 6.4E-06 47.4 7.9 113 161-282 12-147 (211)
67 d1e32a2 c.37.1.20 (A:201-458) 93.3 0.055 4E-06 50.0 6.4 71 159-247 39-111 (258)
68 d1ofha_ c.37.1.20 (A:) HslU {H 93.1 0.11 8.3E-06 49.1 8.4 19 157-175 48-66 (309)
69 g1qhh.1 c.37.1.19 (A:,B:,C:,D: 92.8 0.073 5.3E-06 54.3 7.0 64 141-211 9-72 (623)
70 d1sxjd2 c.37.1.20 (D:26-262) R 92.3 0.12 8.5E-06 46.0 7.0 15 160-174 35-49 (237)
71 d1sxja2 c.37.1.20 (A:295-547) 92.2 0.12 8.7E-06 46.4 7.0 53 121-175 11-69 (253)
72 d1ixsb2 c.37.1.20 (B:4-242) Ho 92.2 0.25 1.8E-05 44.0 9.2 44 121-176 6-53 (239)
73 d1in4a2 c.37.1.20 (A:17-254) H 92.1 0.12 8.5E-06 46.3 6.7 91 121-246 6-99 (238)
74 d1nkta4 c.37.1.19 (A:397-615) 92.0 0.24 1.7E-05 44.4 8.4 65 239-303 6-98 (219)
75 d1okkd2 c.37.1.10 (D:97-303) G 91.7 0.16 1.2E-05 45.4 7.1 115 159-282 7-144 (207)
76 d1vmaa2 c.37.1.10 (A:82-294) G 91.3 0.16 1.2E-05 45.6 6.7 110 161-279 14-146 (213)
77 d1t5la1 c.37.1.19 (A:2-414) Nu 91.3 0.12 8.7E-06 51.2 6.2 58 143-212 11-73 (413)
78 d1tf7a2 c.37.1.11 (A:256-497) 90.9 0.37 2.7E-05 42.7 8.9 36 158-202 26-61 (242)
79 d1qvra2 c.37.1.20 (A:149-535) 90.9 0.55 4E-05 45.8 10.7 84 159-249 44-131 (387)
80 d1jbka_ c.37.1.20 (A:) ClpB, A 90.6 0.11 8E-06 46.2 4.7 84 159-249 44-131 (195)
81 d2b8ta1 c.37.1.24 (A:11-149) T 89.4 0.58 4.2E-05 38.8 8.2 71 161-245 5-91 (139)
82 d1fnna2 c.37.1.20 (A:1-276) CD 89.0 0.5 3.6E-05 41.9 8.1 17 159-175 44-60 (276)
83 d1cr2a_ c.37.1.11 (A:) Gene 4 88.9 0.56 4.1E-05 42.5 8.5 37 158-202 35-71 (277)
84 d2i3ba1 c.37.1.11 (A:1-189) Ca 88.7 0.21 1.5E-05 41.6 4.9 27 159-186 2-28 (189)
85 d2fnaa2 c.37.1.20 (A:1-283) Ar 88.7 1.6 0.00012 38.4 11.4 40 117-173 5-44 (283)
86 d1g5ta_ c.37.1.11 (A:) ATP:cor 87.4 1.5 0.00011 37.2 9.6 51 232-282 93-145 (157)
87 d1e9ra_ c.37.1.11 (A:) Bacteri 87.4 0.24 1.7E-05 48.3 5.0 46 156-210 48-93 (433)
88 d1w44a_ c.37.1.11 (A:) NTPase 86.5 0.2 1.5E-05 47.9 3.7 100 159-275 123-235 (321)
89 d2pmka1 c.37.1.12 (A:467-707) 85.9 0.49 3.5E-05 43.1 6.0 17 157-173 28-44 (241)
90 d1p9ra_ c.37.1.11 (A:) Extrace 85.2 0.32 2.3E-05 47.6 4.6 51 117-184 131-183 (401)
91 d1g41a_ c.37.1.20 (A:) HslU {H 84.9 0.14 1.1E-05 51.0 1.9 26 157-184 48-73 (443)
92 d1xbta1 c.37.1.24 (A:18-150) T 83.7 0.28 2E-05 40.6 2.9 35 161-204 5-39 (133)
93 d3b60a1 c.37.1.12 (A:329-581) 83.5 0.63 4.6E-05 42.6 5.6 17 157-173 40-56 (253)
94 d2hyda1 c.37.1.12 (A:324-578) 82.4 0.48 3.5E-05 43.5 4.3 17 157-173 43-59 (255)
95 d1qvra3 c.37.1.20 (A:536-850) 82.1 0.55 4E-05 44.4 4.7 69 160-246 55-138 (315)
96 d1xx6a1 c.37.1.24 (A:2-142) Th 81.9 0.79 5.7E-05 38.1 5.1 71 161-246 10-93 (141)
97 d1mv5a_ c.37.1.12 (A:) Multidr 78.0 0.72 5.2E-05 41.9 3.8 37 233-269 157-193 (242)
98 d1tf7a1 c.37.1.11 (A:14-255) C 75.8 2 0.00015 36.8 6.2 18 158-175 26-43 (242)
99 d1c4oa1 c.37.1.19 (A:2-409) Nu 74.1 1.2 8.5E-05 43.6 4.4 59 143-213 8-71 (408)
100 d1kaga_ c.37.1.2 (A:) Shikimat 74.0 0.7 5.1E-05 37.2 2.3 18 158-175 2-19 (169)
101 d1sgwa_ c.37.1.12 (A:) Putativ 72.7 2.8 0.0002 36.5 6.3 17 157-173 26-42 (200)
102 d1um8a_ c.37.1.20 (A:) ClpX {H 72.4 1.2 9E-05 42.7 4.0 17 159-175 69-85 (364)
103 d1zp6a1 c.37.1.25 (A:6-181) Hy 70.9 0.56 4.1E-05 38.8 1.0 18 156-173 2-19 (176)
104 d1gvnb_ c.37.1.21 (B:) Plasmid 70.5 1.1 7.8E-05 39.9 2.9 16 159-174 33-48 (273)
105 d1np6a_ c.37.1.10 (A:) Molybdo 70.1 1.9 0.00014 35.0 4.3 24 161-185 5-28 (170)
106 d1nlfa_ c.37.1.11 (A:) Hexamer 69.7 9.1 0.00067 33.6 9.4 32 153-185 24-55 (274)
107 d1ly1a_ c.37.1.1 (A:) Polynucl 68.6 0.87 6.4E-05 36.8 1.7 13 161-173 5-17 (152)
108 d1y63a_ c.37.1.1 (A:) Probable 66.6 1.1 7.7E-05 37.0 1.9 17 158-174 5-21 (174)
109 d1lw7a2 c.37.1.1 (A:220-411) T 66.5 0.68 5E-05 38.2 0.6 15 159-173 8-22 (192)
110 d1viaa_ c.37.1.2 (A:) Shikimat 64.7 1.2 9.1E-05 37.0 1.9 17 159-175 1-17 (161)
111 d2bdta1 c.37.1.25 (A:1-176) Hy 64.5 1.2 8.7E-05 36.2 1.8 15 160-174 4-18 (176)
112 d1rkba_ c.37.1.1 (A:) Adenylat 64.3 1.2 9E-05 36.3 1.8 16 159-174 5-20 (173)
113 d1bg2a_ c.37.1.9 (A:) Kinesin 61.5 2.4 0.00017 39.6 3.5 25 151-175 67-93 (323)
114 d1mo6a1 c.37.1.11 (A:1-269) Re 60.8 11 0.00081 34.1 8.1 24 158-181 60-83 (269)
115 d1goja_ c.37.1.9 (A:) Kinesin 60.3 2.3 0.00017 40.3 3.2 23 152-174 72-96 (354)
116 d1w5sa2 c.37.1.20 (A:7-293) CD 59.4 1 7.5E-05 40.0 0.4 17 232-248 131-147 (287)
117 d1g8pa_ c.37.1.20 (A:) ATPase 58.3 1.8 0.00013 40.3 2.0 18 157-174 27-44 (333)
118 d1gkya_ c.37.1.1 (A:) Guanylat 57.6 1.8 0.00013 36.8 1.7 15 159-173 2-16 (186)
119 d1svma_ c.37.1.20 (A:) Papillo 57.3 3.8 0.00028 39.0 4.2 44 139-183 131-178 (362)
120 d1qhxa_ c.37.1.3 (A:) Chloramp 57.0 1.8 0.00013 35.3 1.5 19 156-174 1-19 (178)
121 d1htwa_ c.37.1.18 (A:) Hypothe 57.0 1.3 9.5E-05 37.5 0.6 39 161-211 36-74 (158)
122 d1w36b1 c.37.1.19 (B:1-485) Ex 56.8 7.2 0.00053 37.0 6.3 53 159-211 17-72 (485)
123 d2zfia1 c.37.1.9 (A:4-352) Kin 54.5 3.7 0.00027 38.7 3.6 25 151-175 78-104 (349)
124 d2ew1a1 c.37.1.8 (A:4-174) Rab 54.4 15 0.0011 29.7 7.3 20 161-185 8-27 (171)
125 d1m8pa3 c.37.1.15 (A:391-573) 53.9 1.2 9.1E-05 36.4 -0.1 20 156-175 4-23 (183)
126 d1knqa_ c.37.1.17 (A:) Glucona 53.8 2.3 0.00017 34.6 1.7 15 161-175 9-23 (171)
127 d1xjca_ c.37.1.10 (A:) Molybdo 53.6 5.8 0.00042 32.4 4.3 23 162-185 5-27 (165)
128 d1v8ka_ c.37.1.9 (A:) Kinesin 53.3 3.8 0.00028 38.9 3.5 24 152-175 106-131 (362)
129 d1sdma_ c.37.1.9 (A:) Kinesin 53.1 3.2 0.00024 39.5 2.9 25 151-175 66-92 (364)
130 d2ncda_ c.37.1.9 (A:) Kinesin 52.7 3.3 0.00024 39.4 2.9 26 150-175 115-142 (368)
131 d1x88a1 c.37.1.9 (A:18-362) Ki 52.1 3.8 0.00028 38.5 3.2 24 151-174 72-97 (345)
132 d1n0wa_ c.37.1.11 (A:) DNA rep 51.1 3.9 0.00028 33.8 2.8 24 158-182 23-46 (242)
133 d1yj5a2 c.37.1.1 (A:351-522) 5 51.0 2.7 0.0002 35.4 1.7 13 161-173 17-29 (172)
134 d1lvga_ c.37.1.1 (A:) Guanylat 50.7 3 0.00022 35.5 2.0 15 159-173 1-15 (190)
135 d1ak2a1 c.37.1.1 (A:14-146,A:1 49.9 2.9 0.00021 35.1 1.8 19 158-176 3-21 (190)
136 d1e6ca_ c.37.1.2 (A:) Shikimat 49.0 3.4 0.00024 34.2 2.0 18 158-175 2-19 (170)
137 d1zaka1 c.37.1.1 (A:3-127,A:15 48.0 3.1 0.00022 35.0 1.6 16 160-175 5-20 (189)
138 d1s96a_ c.37.1.1 (A:) Guanylat 47.3 3.5 0.00026 35.8 1.9 17 157-173 1-17 (205)
139 d1f9va_ c.37.1.9 (A:) Kinesin 47.2 3.9 0.00028 38.4 2.3 25 151-175 74-100 (342)
140 d1ry6a_ c.37.1.9 (A:) Kinesin 47.1 5.4 0.0004 37.1 3.4 19 157-175 82-102 (330)
141 d1szpa2 c.37.1.11 (A:145-395) 46.4 3.8 0.00028 35.1 2.0 16 158-173 34-49 (251)
142 d1znwa1 c.37.1.1 (A:20-201) Gu 45.8 3.9 0.00028 34.2 1.9 17 158-174 2-18 (182)
143 d1e4va1 c.37.1.1 (A:1-121,A:15 45.6 3.5 0.00026 34.2 1.6 16 160-175 2-17 (179)
144 d1zina1 c.37.1.1 (A:1-125,A:16 45.2 3.7 0.00027 33.9 1.6 16 160-175 2-17 (182)
145 d2cdna1 c.37.1.1 (A:1-181) Ade 44.9 3.5 0.00025 34.3 1.4 17 160-176 2-18 (181)
146 d1ukza_ c.37.1.1 (A:) Uridylat 44.8 3.7 0.00027 34.6 1.6 14 161-174 11-24 (196)
147 d1yrba1 c.37.1.10 (A:1-244) AT 44.6 8.6 0.00063 32.9 4.2 22 161-183 3-24 (244)
148 d1xp8a1 c.37.1.11 (A:15-282) R 44.5 14 0.001 33.3 5.8 23 158-180 57-79 (268)
149 d1s3ga1 c.37.1.1 (A:1-125,A:16 44.0 3.9 0.00028 34.1 1.6 15 161-175 3-17 (182)
150 d1pzna2 c.37.1.11 (A:96-349) D 43.9 5 0.00036 34.7 2.4 24 158-182 36-59 (254)
151 d1khta_ c.37.1.1 (A:) Adenylat 43.6 4.1 0.0003 33.2 1.7 15 159-173 2-16 (190)
152 d1qf9a_ c.37.1.1 (A:) UMP/CMP 43.5 4.1 0.0003 34.2 1.7 14 161-174 9-22 (194)
153 d1nksa_ c.37.1.1 (A:) Adenylat 42.5 9.9 0.00072 30.8 4.1 14 161-174 4-17 (194)
154 d1akya1 c.37.1.1 (A:3-130,A:16 42.4 4.2 0.00031 33.9 1.6 16 160-175 4-19 (180)
155 d1kgda_ c.37.1.1 (A:) Guanylat 41.7 4.8 0.00035 33.9 1.9 23 158-185 3-25 (178)
156 d1r6bx3 c.37.1.20 (X:437-751) 41.6 4.2 0.00031 37.7 1.6 23 160-184 54-76 (315)
157 d3adka_ c.37.1.1 (A:) Adenylat 41.0 5.3 0.00039 33.6 2.0 20 155-174 5-24 (194)
158 d1nija1 c.37.1.10 (A:2-223) Hy 41.0 12 0.00085 32.6 4.5 21 161-186 6-26 (222)
159 d1x6va3 c.37.1.4 (A:34-228) Ad 41.0 2.3 0.00017 35.4 -0.4 18 158-175 19-36 (195)
160 d2ak3a1 c.37.1.1 (A:0-124,A:16 40.9 4.6 0.00033 34.3 1.6 16 160-175 8-23 (189)
161 d1bifa1 c.37.1.7 (A:37-249) 6- 40.7 4.9 0.00036 33.7 1.7 15 161-175 5-19 (213)
162 d2iyva1 c.37.1.2 (A:2-166) Shi 40.4 5.2 0.00038 32.7 1.8 16 160-175 3-18 (165)
163 d1svia_ c.37.1.8 (A:) Probable 40.1 68 0.0049 25.9 9.4 13 161-173 26-38 (195)
164 d1ny5a2 c.37.1.20 (A:138-384) 39.1 7.8 0.00057 34.5 3.0 19 155-173 20-38 (247)
165 d1teva_ c.37.1.1 (A:) UMP/CMP 38.4 5.3 0.00039 33.4 1.6 15 161-175 4-18 (194)
166 d1wb9a2 c.37.1.12 (A:567-800) 38.0 24 0.0017 30.9 6.2 29 158-186 41-69 (234)
167 d1rz3a_ c.37.1.6 (A:) Hypothet 36.5 6.2 0.00045 32.5 1.7 15 159-173 22-37 (198)
168 d1byia_ c.37.1.10 (A:) Dethiob 35.9 13 0.00093 31.0 3.8 33 160-201 3-36 (224)
169 d1v5wa_ c.37.1.11 (A:) Meiotic 35.2 6.3 0.00046 33.9 1.6 18 158-175 37-54 (258)
170 d2f9la1 c.37.1.8 (A:8-182) Rab 34.7 17 0.0013 29.5 4.4 20 161-185 7-26 (175)
171 g1xew.1 c.37.1.12 (X:,Y:) Smc 34.7 6.6 0.00048 35.6 1.7 14 161-174 29-42 (329)
172 d1u94a1 c.37.1.11 (A:6-268) Re 33.3 19 0.0014 32.2 4.7 25 158-182 54-78 (263)
173 g1ii8.1 c.37.1.12 (A:,B:) Rad5 33.1 7.4 0.00054 34.6 1.7 15 161-175 26-40 (369)
174 d2fh5b1 c.37.1.8 (B:63-269) Si 32.9 7.7 0.00056 32.7 1.7 22 159-185 1-22 (207)
175 d1jj7a_ c.37.1.12 (A:) Peptide 32.9 9 0.00065 34.3 2.3 17 157-173 39-55 (251)
176 d1w1wa_ c.37.1.12 (A:) Smc hea 32.0 7.8 0.00057 36.1 1.8 15 161-175 28-42 (427)
177 d2bmea1 c.37.1.8 (A:6-179) Rab 31.8 55 0.004 26.0 7.3 20 161-185 8-27 (174)
178 d1uj2a_ c.37.1.6 (A:) Uridine- 31.4 8.3 0.00061 32.7 1.7 11 163-173 7-17 (213)
179 d2i1qa2 c.37.1.11 (A:65-322) D 31.4 11 0.00077 31.9 2.4 25 158-183 34-58 (258)
180 d1qhla_ c.37.1.12 (A:) Cell di 29.9 3.6 0.00026 33.7 -1.1 21 162-184 28-48 (222)
181 d1yzqa1 c.37.1.8 (A:14-177) Ra 29.0 91 0.0067 24.2 8.1 21 161-186 3-23 (164)
182 g1f2t.1 c.37.1.12 (A:,B:) Rad5 28.9 9.7 0.00071 33.3 1.7 15 161-175 26-40 (292)
183 d1l2ta_ c.37.1.12 (A:) MJ0796 27.1 11 0.00081 33.3 1.8 17 157-173 30-46 (230)
184 d1e69a_ c.37.1.12 (A:) Smc hea 26.3 12 0.00088 33.3 1.9 15 161-175 27-41 (308)
185 d1wmsa_ c.37.1.8 (A:) Rab9a {H 25.9 12 0.00087 30.5 1.7 17 157-173 1-21 (174)
186 d1r0wa_ c.37.1.12 (A:) Cystic 25.7 14 0.001 33.5 2.3 17 157-173 61-77 (281)
187 d1ckea_ c.37.1.1 (A:) CMP kina 25.3 12 0.00086 31.4 1.6 16 161-176 5-21 (225)
188 d1knxa2 c.91.1.2 (A:133-309) H 24.3 15 0.0011 31.1 2.1 19 157-175 14-32 (177)
189 d1odfa_ c.37.1.6 (A:) Hypothet 24.3 15 0.0011 33.6 2.1 11 163-173 32-42 (286)
190 d1sq5a_ c.37.1.6 (A:) Pantothe 24.3 35 0.0025 31.2 4.8 12 163-174 85-96 (308)
191 d1g2912 c.37.1.12 (1:1-240) Ma 24.2 14 0.001 32.8 1.9 17 157-173 28-44 (240)
192 d1tuea_ c.37.1.20 (A:) Replica 24.1 28 0.0021 30.1 3.9 51 130-183 23-77 (205)
193 d1u0la2 c.37.1.8 (A:69-293) Pr 24.0 18 0.0013 31.8 2.5 33 147-184 84-116 (225)
194 d3dhwc1 c.37.1.12 (C:1-240) Me 23.8 16 0.0012 32.4 2.2 17 157-173 30-46 (240)
195 d1v43a3 c.37.1.12 (A:7-245) Hy 23.5 15 0.0011 32.7 1.9 17 157-173 31-47 (239)
196 d1r8sa_ c.37.1.8 (A:) ADP-ribo 23.4 14 0.00099 29.0 1.5 13 161-173 3-15 (160)
197 d2onka1 c.37.1.12 (A:1-240) Mo 23.3 14 0.001 32.8 1.7 15 159-173 24-39 (240)
198 d2awna2 c.37.1.12 (A:4-235) Ma 22.9 18 0.0013 32.0 2.3 17 157-173 25-41 (232)
199 d1ko7a2 c.91.1.2 (A:130-298) H 22.4 18 0.0013 30.3 2.1 19 157-175 14-32 (169)
200 d1f6ba_ c.37.1.8 (A:) SAR1 {Ch 22.2 14 0.001 29.5 1.4 21 160-185 15-35 (186)
201 d1ji0a_ c.37.1.12 (A:) Branche 22.2 16 0.0012 32.2 1.9 17 157-173 31-47 (240)
202 d1kkma_ c.91.1.2 (A:) HPr kina 22.0 18 0.0013 30.5 2.1 19 157-175 13-31 (176)
203 d1ihua1 c.37.1.10 (A:1-296) Ar 21.4 40 0.0029 29.2 4.6 19 159-177 9-27 (296)
204 d1vhta_ c.37.1.1 (A:) Dephosph 21.3 17 0.0012 30.9 1.7 13 163-175 8-20 (208)
205 d2vp4a1 c.37.1.1 (A:12-208) De 21.3 17 0.0012 30.0 1.7 13 161-173 12-24 (197)
206 d1q3ta_ c.37.1.1 (A:) CMP kina 20.4 18 0.0013 30.3 1.8 14 163-176 8-21 (223)
207 d2a5ja1 c.37.1.8 (A:9-181) Rab 20.0 26 0.0019 28.2 2.7 21 161-186 6-26 (173)
No 1
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2.6e-39 Score=310.91 Aligned_cols=171 Identities=30% Similarity=0.431 Sum_probs=153.4
Q ss_pred eccCCCCCCCCCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCC
Q 042373 111 IREKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVV 190 (494)
Q Consensus 111 v~g~~~P~pi~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~ 190 (494)
.....-.....+|+++||++.++++|+++||..|||||+++||.++.|+|++++|+||||||+||++|+++++....
T Consensus 7 ~~~~~~~~~~~sF~~l~L~~~l~~~L~~~g~~~pt~IQ~~aIp~il~g~dvi~~a~TGSGKTlayllPil~~l~~~~--- 83 (222)
T d2j0sa1 7 FETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV--- 83 (222)
T ss_dssp CCCCTTCCCCCSGGGGCCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHTCCTTS---
T ss_pred cccCCCCCCCCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCeEEEcCcchhhhhhhcccccccccccc---
Confidence 33444456677999999999999999999999999999999999999999999999999999999999999885432
Q ss_pred CCCCCCeEEEEccchhHHHhh---------------------------------------hhhhHHHHHHHhcCcceecc
Q 042373 191 PGDDSPVGLVMAPTGELVRQQ---------------------------------------VRRGRMIDLLCKNGVKITNL 231 (494)
Q Consensus 191 ~~~~~p~aLIl~PTreLa~Qi---------------------------------------~TPgrl~dll~~~~~~~~~l 231 (494)
.++++||++||||||.|+ +|||||.+++..+ ..++
T Consensus 84 ---~~~~~lil~PtreLa~Qi~~~~~~l~~~~~i~~~~~~g~~~~~~~~~~l~~~~~Ilv~TPgrl~~~~~~~---~~~~ 157 (222)
T d2j0sa1 84 ---RETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRR---SLRT 157 (222)
T ss_dssp ---CSCCEEEECSSHHHHHHHHHHHHHHTTTTTCCEEEECTTSCHHHHHHHHHHCCSEEEECHHHHHHHHHTT---SSCC
T ss_pred ---cCceeEEecchHHHHHHHHHHHHHHhCccceeEEEEeecccchhhHHHhccCCeEEeCCCCcHHhccccc---cccc
Confidence 378999999999999998 8999999998874 3578
Q ss_pred cceEEEEEcccchhcccCChhHHHHHHHhhcCCCcEEEecCCCChHHHHHHHhcCCccc
Q 042373 232 TRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNL 290 (494)
Q Consensus 232 ~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~~g~~~I 290 (494)
+++++||+||||+|+++||.+++..|++.+++.+|+++||||+|+++..++++.-..++
T Consensus 158 ~~l~~lVlDEaD~ll~~~f~~~i~~I~~~l~~~~Q~ilfSAT~~~~v~~l~~~~l~~Pv 216 (222)
T d2j0sa1 158 RAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPI 216 (222)
T ss_dssp TTCCEEEEETHHHHTSTTTHHHHHHHHTTSCTTCEEEEEESCCCHHHHTTGGGTCSSCE
T ss_pred ccceeeeecchhHhhhcCcHHHHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCE
Confidence 99999999999999999999999999999999999999999999999988876433333
No 2
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=7.8e-39 Score=303.88 Aligned_cols=161 Identities=29% Similarity=0.469 Sum_probs=148.6
Q ss_pred CCCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEE
Q 042373 120 IKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199 (494)
Q Consensus 120 i~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aL 199 (494)
.++|++++|++.|+++|.++||..|||+|++|||.+++|+|++++||||||||+||++|+++++.... .++.+|
T Consensus 2 ~~~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllP~l~~~~~~~------~~~~~l 75 (206)
T d1veca_ 2 GNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK------DNIQAM 75 (206)
T ss_dssp CSSGGGSCCCHHHHHHHHTTTCCSCCHHHHHHHHHHHTTCCEEEECCSSSTTHHHHHHHHHHHCCTTS------CSCCEE
T ss_pred CCChhccCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeeccCccccccccccchhhcccccc------cCcceE
Confidence 37899999999999999999999999999999999999999999999999999999999999875432 388999
Q ss_pred EEccchhHHHhh----------------------------------------hhhhHHHHHHHhcCcceecccceEEEEE
Q 042373 200 VMAPTGELVRQQ----------------------------------------VRRGRMIDLLCKNGVKITNLTRVTYLVL 239 (494)
Q Consensus 200 Il~PTreLa~Qi----------------------------------------~TPgrl~dll~~~~~~~~~l~~l~~lVl 239 (494)
|++||||||.|+ +||||+.+++..+ ..+++++++||+
T Consensus 76 il~pt~el~~q~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~ivv~TPgrl~~~~~~~---~~~~~~l~~lVl 152 (206)
T d1veca_ 76 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKG---VAKVDHVQMIVL 152 (206)
T ss_dssp EECSCHHHHHHHHHHHHHHTTTSSSCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTT---CSCCTTCCEEEE
T ss_pred EEeecchhhHHHHHHHHHHhhcccCcccccccCCccHHHHHHHHHhccCeEEeCCccccccccch---hccccccceEEE
Confidence 999999999998 7999999999874 357899999999
Q ss_pred cccchhcccCChhHHHHHHHhhcCCCcEEEecCCCChHHHHHHHhcCCcc
Q 042373 240 DEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCN 289 (494)
Q Consensus 240 DEaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~~g~~~ 289 (494)
||||+|+++||.+++..|++.+++++|+++||||+|+++..+++..-+.+
T Consensus 153 DEaD~ll~~~f~~~i~~I~~~~~~~~Q~~l~SAT~~~~v~~l~~~~l~~P 202 (206)
T d1veca_ 153 DEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLEKP 202 (206)
T ss_dssp ETHHHHTSTTTHHHHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSC
T ss_pred eccccccccchHHHHHHHHHhCCCCCEEEEEEecCCHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999998744333
No 3
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=8.6e-39 Score=306.35 Aligned_cols=170 Identities=31% Similarity=0.440 Sum_probs=155.7
Q ss_pred CCCCCCCCCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCC
Q 042373 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGD 193 (494)
Q Consensus 114 ~~~P~pi~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~ 193 (494)
.+.|.|+.+|++++|++.++++|.++||..|||+|++|||.++.|+|++++|+||||||+||++|+++++... .
T Consensus 5 ~~~~e~i~sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKTlayllp~l~~i~~~------~ 78 (218)
T d2g9na1 5 SNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELD------L 78 (218)
T ss_dssp CCCCCCCCCGGGSCCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCCEEEECCTTSSHHHHHHHHHHHHCCTT------C
T ss_pred CCCCCccCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEEEcccchhhhhhhhhhhhheeccc------c
Confidence 4578999999999999999999999999999999999999999999999999999999999999999998543 2
Q ss_pred CCCeEEEEccchhHHHhh----------------------------------------hhhhHHHHHHHhcCcceecccc
Q 042373 194 DSPVGLVMAPTGELVRQQ----------------------------------------VRRGRMIDLLCKNGVKITNLTR 233 (494)
Q Consensus 194 ~~p~aLIl~PTreLa~Qi----------------------------------------~TPgrl~dll~~~~~~~~~l~~ 233 (494)
.++++||++||||||.|+ +||+|+.+++.++ ...+++
T Consensus 79 ~~~~alil~Pt~eL~~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IvV~TP~rl~~~l~~~---~~~~~~ 155 (218)
T d2g9na1 79 KATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRR---YLSPKY 155 (218)
T ss_dssp CSCCEEEECSSHHHHHHHHHHHHHHHTTTTCCEEEECC--CCCSTTTSSSSCCCSEEEECHHHHHHHHHTT---SSCSTT
T ss_pred cCccEEEEcccchhhhhHHHHHhhhccccceeEEeeecccchhHHHHHHhcCCCEEEEeCChhHHHHHhcC---Cccccc
Confidence 389999999999999998 8999999999864 357899
Q ss_pred eEEEEEcccchhcccCChhHHHHHHHhhcCCCcEEEecCCCChHHHHHHHhcCCcccee
Q 042373 234 VTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSI 292 (494)
Q Consensus 234 l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~~g~~~ILV 292 (494)
+++||+||||+|++.+|.+++..|++.++.++|+++||||+|+.+..+++..-+-++.|
T Consensus 156 l~~lVlDEaD~ll~~~f~~~~~~Il~~~~~~~Q~il~SAT~~~~v~~~~~~~l~~pv~i 214 (218)
T d2g9na1 156 IKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI 214 (218)
T ss_dssp CCEEEEESHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESCCCHHHHHHHHHHCSSCEEE
T ss_pred ceEEEeeecchhhcCchHHHHHHHHHhCCCCCeEEEEEecCCHHHHHHHHHHCCCCEEE
Confidence 99999999999999999999999999999999999999999999999998744444443
No 4
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=1.2e-38 Score=303.94 Aligned_cols=171 Identities=31% Similarity=0.414 Sum_probs=158.2
Q ss_pred cCCCCCCCCCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCC
Q 042373 113 EKCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG 192 (494)
Q Consensus 113 g~~~P~pi~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~ 192 (494)
|.+.|.++.+|++++|++.++++|+++||++|||+|+++||.++.|+|++++||||||||++|++|+++++...
T Consensus 2 ~~~~~~~~~sF~~l~l~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvl~~a~TGsGKT~a~~lp~i~~l~~~------ 75 (212)
T d1qdea_ 2 QTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTS------ 75 (212)
T ss_dssp CBSCCCCCCCGGGGTCCHHHHHHHHHHTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHCCTT------
T ss_pred CCCCcccccChhhCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEeecccccchhhhhHhhhHhhhhcc------
Confidence 56889999999999999999999999999999999999999999999999999999999999999999998433
Q ss_pred CCCCeEEEEccchhHHHhh--------------------------------------hhhhHHHHHHHhcCcceecccce
Q 042373 193 DDSPVGLVMAPTGELVRQQ--------------------------------------VRRGRMIDLLCKNGVKITNLTRV 234 (494)
Q Consensus 193 ~~~p~aLIl~PTreLa~Qi--------------------------------------~TPgrl~dll~~~~~~~~~l~~l 234 (494)
..+|++||++||++|+.|+ +||+++..++..+. .+++++
T Consensus 76 ~~~~~~lil~pt~el~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~IvI~TP~~l~~~~~~~~---~~l~~l 152 (212)
T d1qdea_ 76 VKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRRR---FRTDKI 152 (212)
T ss_dssp CCSCCEEEECSSHHHHHHHHHHHHHHTTTSCCCEEEECC----------CTTCSEEEECHHHHHHHHHTTS---SCCTTC
T ss_pred CCCcceEEEcccHHHhhhhhhhhcccccccccceeeEeeccchhHHHHHhcCCcEEEECCCccccccccCc---eecCcc
Confidence 2389999999999999998 79999999988753 479999
Q ss_pred EEEEEcccchhcccCChhHHHHHHHhhcCCCcEEEecCCCChHHHHHHHhcCCcccee
Q 042373 235 TYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSI 292 (494)
Q Consensus 235 ~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~~g~~~ILV 292 (494)
+++|+||||+|++++|.+++..|++.+++.+|+++||||+|+.+..++++..+-++.|
T Consensus 153 ~~lVlDEad~lld~~f~~~v~~I~~~~~~~~Q~vl~SAT~~~~v~~l~~~~l~~Pv~i 210 (212)
T d1qdea_ 153 KMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRI 210 (212)
T ss_dssp CEEEEETHHHHHHTTCHHHHHHHHHHSCTTCEEEEEESSCCHHHHHHHHHHCSSCEEE
T ss_pred eEEeehhhhhhcccchHHHHHHHHHhCCCCCeEEEEEeeCCHHHHHHHHHHCCCCEEE
Confidence 9999999999999999999999999999999999999999999999998855555554
No 5
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=7.8e-38 Score=297.16 Aligned_cols=155 Identities=26% Similarity=0.413 Sum_probs=144.4
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEE
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLI 200 (494)
++|++|+|++.++++|.++||+.|||+|+++||.+++|+|++++||||||||+||++|+++++... ..+++++|
T Consensus 1 s~F~dl~L~~~l~~~l~~~g~~~pt~iQ~~aip~il~g~dvl~~A~TGsGKTla~~lp~l~~~~~~------~~~~~~li 74 (207)
T d1t6na_ 1 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV------TGQVSVLV 74 (207)
T ss_dssp CCSTTSCCCHHHHHHHHHTTCCCCCHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHCCCC------TTCCCEEE
T ss_pred CCccccCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCeEEEeccccccccccccceeeeeccc------CCCceEEE
Confidence 479999999999999999999999999999999999999999999999999999999999987443 23789999
Q ss_pred EccchhHHHhh-----------------------------------------hhhhHHHHHHHhcCcceecccceEEEEE
Q 042373 201 MAPTGELVRQQ-----------------------------------------VRRGRMIDLLCKNGVKITNLTRVTYLVL 239 (494)
Q Consensus 201 l~PTreLa~Qi-----------------------------------------~TPgrl~dll~~~~~~~~~l~~l~~lVl 239 (494)
++||||||.|+ +||+|+.+++..+ .+++++++++|+
T Consensus 75 l~PtreL~~qi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ilI~TP~rl~~~~~~~---~~~l~~l~~lVl 151 (207)
T d1t6na_ 75 MCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNK---SLNLKHIKHFIL 151 (207)
T ss_dssp ECSCHHHHHHHHHHHHHHTTTSTTCCEEEESCCSCHHHHHHHHHHSCCSEEEECHHHHHHHHHTT---SSCCTTCCEEEE
T ss_pred EeccchhhHHHHHHHHHHHhhCCCceeEEEeccccHHHHHHHHHhcCCCEEEeCcchhhhhccCC---ceeccccceeeh
Confidence 99999999998 7999999999874 357999999999
Q ss_pred cccchhcc-cCChhHHHHHHHhhcCCCcEEEecCCCChHHHHHHHh
Q 042373 240 DEADRMFD-MGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284 (494)
Q Consensus 240 DEaD~ml~-~gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~ 284 (494)
||||+|++ +||.+.+..|++.+++++|+++||||+++.++.+++.
T Consensus 152 DEaD~ll~~~~~~~~i~~I~~~~~~~~Q~il~SAT~~~~v~~l~~~ 197 (207)
T d1t6na_ 152 DECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRK 197 (207)
T ss_dssp ESHHHHHSSHHHHHHHHHHHHTSCSSSEEEEEESCCCTTTHHHHHT
T ss_pred hhhhhhhhcCCcHHHHHHHHHhCCCCCEEEEEeeeCCHHHHHHHHH
Confidence 99999998 5899999999999999999999999999999999876
No 6
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=100.00 E-value=1.5e-36 Score=294.29 Aligned_cols=176 Identities=36% Similarity=0.533 Sum_probs=154.2
Q ss_pred CCCCCCCCCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCC---C
Q 042373 114 KCAPKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPV---V 190 (494)
Q Consensus 114 ~~~P~pi~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~---~ 190 (494)
.+.|.++.+|++++|++.|+++|.++||..|||+|+++||.++.|+|++++||||||||+||++|+++++...... .
T Consensus 14 ~~~~~~~~~F~~l~l~~~l~~~L~~~g~~~pt~iQ~~~ip~il~g~dvvi~a~TGsGKTlayllp~l~~l~~~~~~~~~~ 93 (238)
T d1wrba1 14 YSATNVIENFDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIINHLVCQDLNQQRY 93 (238)
T ss_dssp SSCCSCCCSSGGGSCCCSTTTTTTTTTCCSCCHHHHHHHHHHHTTCCEEEECCTTSSHHHHHHHHHHHHHHTTCC-----
T ss_pred CCCCCccCCHHHCCCCHHHHHHHHHCCCCCCCHHHHHHhhhhhCCCCEEEECCCCCCcceeeHHHHHHHHHhcccccccc
Confidence 3456789999999999999999999999999999999999999999999999999999999999999999765321 1
Q ss_pred CCCCCCeEEEEccchhHHHhh---------------------------------------hhhhHHHHHHHhcCcceecc
Q 042373 191 PGDDSPVGLVMAPTGELVRQQ---------------------------------------VRRGRMIDLLCKNGVKITNL 231 (494)
Q Consensus 191 ~~~~~p~aLIl~PTreLa~Qi---------------------------------------~TPgrl~dll~~~~~~~~~l 231 (494)
....+|++|||+||+|||.|+ +||++|.+++..+ ...|
T Consensus 94 ~~~~~~~alil~pt~el~~q~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ivV~TP~~l~~~~~~~---~~~l 170 (238)
T d1wrba1 94 SKTAYPKCLILAPTRELAIQILSESQKFSLNTPLRSCVVYGGADTHSQIREVQMGCHLLVATPGRLVDFIEKN---KISL 170 (238)
T ss_dssp -CCBCCSEEEECSSHHHHHHHHHHHHHHHTTSSCCEEEECSSSCSHHHHHHHSSCCSEEEECHHHHHHHHHTT---SBCC
T ss_pred cCCCCceEEEeccchhhhcchheeeeecccCCCcEEEEEeccchhhHHHhhcccCCceeecCHHHHHhHHccC---ceec
Confidence 223489999999999999998 8999999999875 3479
Q ss_pred cceEEEEEcccchhcccCChhHHHHHHHhhc----CCCcEEEecCCCChHHHHHHHhcCCcccee
Q 042373 232 TRVTYLVLDEADRMFDMGFEPQITRIVQNIR----PDRQAVLFSPTFPPRVEILARKTNVCNLSI 292 (494)
Q Consensus 232 ~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~----~~~Q~ilfSAT~~~~v~~l~~~~g~~~ILV 292 (494)
++++++|+||||+|++.+|.+++..|++.++ .++|+++||||++..++.+++..-+..+.|
T Consensus 171 ~~v~~lViDEaD~ll~~~f~~~i~~Il~~~~~~~~~~~Q~il~SAT~~~~v~~l~~~~~~~p~~i 235 (238)
T d1wrba1 171 EFCKYIVLDEADRMLDMGFEPQIRKIIEESNMPSGINRQTLMFSATFPKEIQKLAADFLYNYIFM 235 (238)
T ss_dssp TTCCEEEEETHHHHHHTTCHHHHHHHHHSSCCCCGGGCEEEEEESSCCHHHHHHHHHHCSSCEEE
T ss_pred cccceeeeehhhhhhhhccHHHHHHHHHHhcCCCCCCCEEEEEeeeCCHHHHHHHHHHCCCCEEE
Confidence 9999999999999999999999999999764 267999999999999999998743334433
No 7
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=3e-35 Score=279.18 Aligned_cols=155 Identities=32% Similarity=0.553 Sum_probs=144.4
Q ss_pred CCCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCC-CEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeE
Q 042373 120 IKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGL-DSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198 (494)
Q Consensus 120 i~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~gr-dvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~a 198 (494)
.++|++++|++.|+++|.++||.+|||+|+++||.+++|+ |++++||||||||++|++|++++.... .+|++
T Consensus 3 ~msf~~l~l~~~l~~~l~~~g~~~pt~iQ~~~ip~~l~g~~d~iv~a~TGsGKT~~~~l~~~~~~~~~-------~~~~~ 75 (208)
T d1hv8a1 3 YMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVNEN-------NGIEA 75 (208)
T ss_dssp CCCGGGSSCCHHHHHHHHHHTCCSCCHHHHHHHHHHHHTCSEEEEECCSSSSHHHHHHHHHHHHSCSS-------SSCCE
T ss_pred ccCHHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCCeeeechhcccccceeecccccccccc-------cCcce
Confidence 3689999999999999999999999999999999999985 999999999999999999999876443 28999
Q ss_pred EEEccchhHHHhh--------------------------------------hhhhHHHHHHHhcCcceecccceEEEEEc
Q 042373 199 LVMAPTGELVRQQ--------------------------------------VRRGRMIDLLCKNGVKITNLTRVTYLVLD 240 (494)
Q Consensus 199 LIl~PTreLa~Qi--------------------------------------~TPgrl~dll~~~~~~~~~l~~l~~lVlD 240 (494)
||++||++||.|+ +||++|.+++.++. ++++++++||+|
T Consensus 76 lil~pt~~l~~q~~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~l~~~~IlV~TP~~l~~~l~~~~---~~~~~l~~lViD 152 (208)
T d1hv8a1 76 IILTPTRELAIQVADEIESLKGNKNLKIAKIYGGKAIYPQIKALKNANIVVGTPGRILDHINRGT---LNLKNVKYFILD 152 (208)
T ss_dssp EEECSCHHHHHHHHHHHHHHHCSSCCCEEEECTTSCHHHHHHHHHTCSEEEECHHHHHHHHHTTC---SCTTSCCEEEEE
T ss_pred EEEeeccccchhhhhhhhhhcccCCeEEEEeeCCCChHHHHHhcCCCCEEEEChHHHHHHHHcCC---CCcccCcEEEEE
Confidence 9999999999998 79999999998753 579999999999
Q ss_pred ccchhcccCChhHHHHHHHhhcCCCcEEEecCCCChHHHHHHHh
Q 042373 241 EADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284 (494)
Q Consensus 241 EaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~ 284 (494)
|||+|++.+|.+++..|++.+++++|+++||||+|+++..++++
T Consensus 153 Ead~l~~~~~~~~i~~I~~~~~~~~Q~i~~SAT~~~~v~~~~~~ 196 (208)
T d1hv8a1 153 EADEMLNMGFIKDVEKILNACNKDKRILLFSATMPREILNLAKK 196 (208)
T ss_dssp THHHHHTTTTHHHHHHHHHTSCSSCEEEEECSSCCHHHHHHHHH
T ss_pred ChHHhhcCCChHHHHHHHHhCCCCCeEEEEEccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999876
No 8
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00 E-value=3.2e-35 Score=278.31 Aligned_cols=163 Identities=31% Similarity=0.493 Sum_probs=149.1
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEE
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLI 200 (494)
.+|++|+|++.|+++|+++||..|||+|+++||.++.|+|+++.||||||||++|++|+++++..+. .++++++
T Consensus 1 ~sF~~l~L~~~l~~~L~~~g~~~pt~iQ~~aip~il~g~dvi~~a~tGsGKTlay~lp~i~~~~~~~------~~~~~~~ 74 (206)
T d1s2ma1 1 NTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKL------NKIQALI 74 (206)
T ss_dssp CCGGGGCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHCCTTS------CSCCEEE
T ss_pred CChHHcCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHcCCCEEEecCCcchhhhhhcccccccccccc------cccccee
Confidence 4799999999999999999999999999999999999999999999999999999999999875443 3788999
Q ss_pred EccchhHHHhh---------------------------------------hhhhHHHHHHHhcCcceecccceEEEEEcc
Q 042373 201 MAPTGELVRQQ---------------------------------------VRRGRMIDLLCKNGVKITNLTRVTYLVLDE 241 (494)
Q Consensus 201 l~PTreLa~Qi---------------------------------------~TPgrl~dll~~~~~~~~~l~~l~~lVlDE 241 (494)
++|+++++.|. +||++|.+++..+ .++|++++++|+||
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~Ili~TP~~l~~~l~~~---~~~l~~l~~lV~DE 151 (206)
T d1s2ma1 75 MVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRK---VADLSDCSLFIMDE 151 (206)
T ss_dssp ECSSHHHHHHHHHHHHHHTTTTTCCEEEECSSSCHHHHHHHTTSCCSEEEECHHHHHHHHHTT---CSCCTTCCEEEEES
T ss_pred eccchhhhhhhhhhhhhcccccCeeEEeecCccchhhHHHHhcccceEEEECCcccccccccc---eeecccceEEEeec
Confidence 99999999887 8999999999874 35799999999999
Q ss_pred cchhcccCChhHHHHHHHhhcCCCcEEEecCCCChHHHHHHHhcCCcccee
Q 042373 242 ADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNLSI 292 (494)
Q Consensus 242 aD~ml~~gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~~g~~~ILV 292 (494)
||+|++.+|.+++..|++.+++.+|+++||||+|+.+..++++.-..++.|
T Consensus 152 aD~l~~~~f~~~v~~I~~~l~~~~Q~il~SATl~~~v~~~~~~~l~~P~~I 202 (206)
T d1s2ma1 152 ADKMLSRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEI 202 (206)
T ss_dssp HHHHSSHHHHHHHHHHHTTSCSSCEEEEEESCCCHHHHHHHHHHCSSCEEE
T ss_pred hhhhhhhhhHHHHHHHHHhCCCCCEEEEEEEeCCHHHHHHHHHHCCCCEEE
Confidence 999999999999999999999999999999999999999998744444443
No 9
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=4.2e-34 Score=270.19 Aligned_cols=157 Identities=29% Similarity=0.456 Sum_probs=144.6
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEE
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLI 200 (494)
++|+++||++.|+++|+++||.+|||+|++|||.+++|+|++++||||||||+||++|+++++.... ..+..++
T Consensus 1 t~F~~l~L~~~l~~~l~~~g~~~pt~iQ~~aip~~l~G~dvii~a~TGSGKTlayllp~l~~~~~~~------~~~~~~~ 74 (209)
T d1q0ua_ 1 TQFTRFPFQPFIIEAIKTLRFYKPTEIQERIIPGALRGESMVGQSQTGTGKTHAYLLPIMEKIKPER------AEVQAVI 74 (209)
T ss_dssp CCGGGSCCCHHHHHHHHHTTCCSCCHHHHHHHHHHHHTCCEEEECCSSHHHHHHHHHHHHHHCCTTS------CSCCEEE
T ss_pred CccccCCcCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCeEeecccccccceeeeeeecccccccc------ccccccc
Confidence 5799999999999999999999999999999999999999999999999999999999999875432 2678999
Q ss_pred EccchhHHHhh-------------------------------------------hhhhHHHHHHHhcCcceecccceEEE
Q 042373 201 MAPTGELVRQQ-------------------------------------------VRRGRMIDLLCKNGVKITNLTRVTYL 237 (494)
Q Consensus 201 l~PTreLa~Qi-------------------------------------------~TPgrl~dll~~~~~~~~~l~~l~~l 237 (494)
++|+++++.+. +||+++.+++.+.. ..+++++++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ilv~TP~~l~~~~~~~~---~~~~~l~~l 151 (209)
T d1q0ua_ 75 TAPTRELATQIYHETLKITKFCPKDRMIVARCLIGGTDKQKALEKLNVQPHIVIGTPGRINDFIREQA---LDVHTAHIL 151 (209)
T ss_dssp ECSSHHHHHHHHHHHHHHHTTSCGGGCCCEEEECCCSHHHHTTCCCSSCCSEEEECHHHHHHHHHTTC---CCGGGCCEE
T ss_pred cccccchhHHHHHHHHhhhccccccccccccccccchhhHHHHHHhccCceEEEecCchhhhhhhhhc---cccccceEE
Confidence 99999998876 79999999988743 468999999
Q ss_pred EEcccchhcccCChhHHHHHHHhhcCCCcEEEecCCCChHHHHHHHhcC
Q 042373 238 VLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARKTN 286 (494)
Q Consensus 238 VlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~~g 286 (494)
|+||||+|++++|.+++..|+..+++++|+++||||+|+++..++++--
T Consensus 152 ViDEad~ll~~~f~~~v~~I~~~~~~~~Q~il~SATl~~~v~~l~~~~l 200 (209)
T d1q0ua_ 152 VVDEADLMLDMGFITDVDQIAARMPKDLQMLVFSATIPEKLKPFLKKYM 200 (209)
T ss_dssp EECSHHHHHHTTCHHHHHHHHHTSCTTCEEEEEESCCCGGGHHHHHHHC
T ss_pred EEeecccccccccHHHHHHHHHHCCCCCEEEEEEccCCHHHHHHHHHHC
Confidence 9999999999999999999999999999999999999999999987633
No 10
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus type 2 [TaxId: 11060]}
Probab=99.93 E-value=1.1e-26 Score=228.97 Aligned_cols=170 Identities=15% Similarity=0.155 Sum_probs=126.8
Q ss_pred HHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh-----------------------
Q 042373 155 IISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ----------------------- 211 (494)
Q Consensus 155 il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi----------------------- 211 (494)
+..|+++|+.||||||||++|++|++...... ++++||++|||+||.|+
T Consensus 6 ~~~~~~~lv~~~TGsGKT~~~l~~~~~~~~~~--------~~~~lvi~Ptr~La~q~~~~l~~~~~~~~~~~~~~~~~~~ 77 (305)
T d2bmfa2 6 FRKKRLTIMDLHPGAGKTKRYLPAIVREAIKR--------GLRTLILAPTRVVAAEMEEALRGLPIRYQTPAIRAEHTGR 77 (305)
T ss_dssp SSTTCEEEECCCTTSSTTTTHHHHHHHHHHHH--------TCCEEEEESSHHHHHHHHHHTTTSCCBCCC--------CC
T ss_pred hhcCCcEEEEECCCCCHHHHHHHHHHHHHHhc--------CCEEEEEccHHHHHHHHHHHHhcCCcceeeeEEeecccCc
Confidence 45789999999999999999999999877653 67899999999999998
Q ss_pred -----hhhhHHHHHHHhcCcceecccceEEEEEcccchhcccCChhHHHHHHHhh--cCCCcEEEecCCCChHHHHHHHh
Q 042373 212 -----VRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNI--RPDRQAVLFSPTFPPRVEILARK 284 (494)
Q Consensus 212 -----~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l--~~~~Q~ilfSAT~~~~v~~l~~~ 284 (494)
+|++.|..++... ..+.++++||+||||++..+++. +..++..+ +...|++++|||++.....+...
T Consensus 78 ~~i~~~t~~~l~~~~~~~----~~~~~~~~vViDE~H~~~~~~~~--~~~~l~~~~~~~~~~~v~~SAT~~~~~~~~~~~ 151 (305)
T d2bmfa2 78 EIVDLMCHATFTMRLLSP----IRVPNYNLIIMDEAHFTDPASIA--ARGYISTRVEMGEAAGIFMTATPPGSRDPFPQS 151 (305)
T ss_dssp CSEEEEEHHHHHHHHTSS----SCCCCCSEEEEESTTCCSHHHHH--HHHHHHHHHHHTSCEEEEECSSCTTCCCSSCCC
T ss_pred cccccCCcHHHHHHHhcC----ccccceeEEEeeeeeecchhhHH--HHHHHHHhhccccceEEEeecCCCcceeeeccc
Confidence 6778776665532 35788999999999999876532 22223222 46789999999976432211110
Q ss_pred ----------------------------------------------------------------------cCCccceeec
Q 042373 285 ----------------------------------------------------------------------TNVCNLSIAN 294 (494)
Q Consensus 285 ----------------------------------------------------------------------~g~~~ILVaT 294 (494)
.+..+++|||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvf~~~~~~~~~l~~~L~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lvaT 231 (305)
T d2bmfa2 152 NAPIMDEEREIPERSWNSGHEWVTDFKGKTVWFVPSIKAGNDIAACLRKNGKKVIQLSRKTFDSEYIKTRTNDWDFVVTT 231 (305)
T ss_dssp SSCEEEEECCCCCSCCSSCCHHHHSSCSCEEEECSCHHHHHHHHHHHHHHTCCCEECCTTCHHHHGGGGGTSCCSEEEEC
T ss_pred CCcceEEEEeccHHHHHHHHHHHHhhCCCEEEEeccHHHHHHHHHHHHhCCCCEEEeCCcChHHHHhhhhccchhhhhhh
Confidence 6888999999
Q ss_pred cccccCCCCCCceEE----------EecCC----------CCCHhHHHhhhccCCCcc---eEEEEec
Q 042373 295 SVRARGLDEKELELV----------INFDA----------PNDYEDYVHHCCQSWLKS---CAFRFIS 339 (494)
Q Consensus 295 dv~~rGlDi~~v~~V----------Inyd~----------P~s~~~yvhR~GRaGr~G---~aitfv~ 339 (494)
+++++|+|++ +++| ++||. |.|..+|+||+||+||.| .+..++.
T Consensus 232 ~~~~~G~~~~-~~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~Qr~GR~GR~~~~~~~~~~~~ 298 (305)
T d2bmfa2 232 DISEMGANFK-AERVIDPRRCMKPVILTDGEERVILAGPMPVTHSSAAQRRGRVGRNPKNENDQYIYM 298 (305)
T ss_dssp GGGGTTCCCC-CSEEEECCEEEEEEEECSSSCEEEEEEEEECCHHHHHHHHTTSSCSSSCCCEEEEEC
T ss_pred HHHHhcCCCC-ccEEEEcCCceeeeEecCCCCceEEeccccCCHHHHhhhhcCcCcCCCCceEEEEEC
Confidence 9999999994 3444 45554 457899999999988844 3444444
No 11
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.90 E-value=1.2e-24 Score=204.00 Aligned_cols=148 Identities=18% Similarity=0.243 Sum_probs=116.0
Q ss_pred CCcccCCCCHHHHHHHHhC-CCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEE
Q 042373 121 KTWRQTGLTTKILETFSKL-NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~-g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aL 199 (494)
...+.++|++.+.+.|++. ||+.++|+|.++|+.+++|+|+++++|||||||++|.+|++.. ...++
T Consensus 2 ~~~e~~~l~~~~~~~l~~~fg~~~~rp~Q~~ai~~~l~g~~vlv~apTGsGKT~~~~~~~~~~------------~~~~~ 69 (206)
T d1oywa2 2 AQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLL------------NGLTV 69 (206)
T ss_dssp CCCCCSSHHHHHHHHHHHTTCCSSCCTTHHHHHHHHHTTCCEEEECSCHHHHHHHHHHHHHHS------------SSEEE
T ss_pred CchhhCCCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCCCcchhhhhhhhc------------cCceE
Confidence 4568899999999999886 9999999999999999999999999999999999999999853 55899
Q ss_pred EEccchhHHHhh---------------------------------------hhhhHHHHHHHhcCcceecccceEEEEEc
Q 042373 200 VMAPTGELVRQQ---------------------------------------VRRGRMIDLLCKNGVKITNLTRVTYLVLD 240 (494)
Q Consensus 200 Il~PTreLa~Qi---------------------------------------~TPgrl~dll~~~~~~~~~l~~l~~lVlD 240 (494)
+++|+++|+.|+ +||.++...... ......++.++|+|
T Consensus 70 ~v~P~~~L~~q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~t~~~~~~~~~~---~~~~~~~v~~lviD 146 (206)
T d1oywa2 70 VVSPLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFL---EHLAHWNPVLLAVD 146 (206)
T ss_dssp EECSCHHHHHHHHHHHHHTTCCEEEECTTSCHHHHHHHHHHHHHTCCSEEEECHHHHTSTTHH---HHHTTSCEEEEEES
T ss_pred EeccchhhhhhHHHHHHhhcccccccccccccccchhHHHHHhcCCceEEEEechhhhchhhc---ccchhheeeeeeee
Confidence 999999999998 234433221111 12346689999999
Q ss_pred ccchhcccCCh--hH---HHHHHHhhcCCCcEEEecCCCChHHHH-HHHh
Q 042373 241 EADRMFDMGFE--PQ---ITRIVQNIRPDRQAVLFSPTFPPRVEI-LARK 284 (494)
Q Consensus 241 EaD~ml~~gf~--~~---i~~Il~~l~~~~Q~ilfSAT~~~~v~~-l~~~ 284 (494)
|||++.++++. .. +..+...+ ++.|+++||||+++.+.+ +++.
T Consensus 147 EaH~~~~~~~~~~~~~~~~~~l~~~~-~~~~ii~lSATl~~~v~~di~~~ 195 (206)
T d1oywa2 147 EAHCISQWGHDFRPEYAALGQLRQRF-PTLPFMALTATADDTTRQDIVRL 195 (206)
T ss_dssp SGGGGCTTSSCCCHHHHGGGGHHHHC-TTSCEEEEESCCCHHHHHHHHHH
T ss_pred eeeeeeccccchHHHHHHHHHHHHhC-CCCceEEEEeCCCHHHHHHHHHH
Confidence 99999988743 22 22333333 579999999999998754 4443
No 12
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.90 E-value=4e-25 Score=212.11 Aligned_cols=143 Identities=17% Similarity=0.103 Sum_probs=107.4
Q ss_pred CCCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEE
Q 042373 120 IKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGL 199 (494)
Q Consensus 120 i~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aL 199 (494)
+..|.+..+.+.+. .+.+.+|.+|+++|+.+|+.++.|+|++++||||||||++|+++++..... +.++|
T Consensus 21 ~~~~~~~~~~~~~~-~~~~~~~~~p~~~Q~~~i~~~l~g~~~~i~apTGsGKT~~~~~~~~~~~~~---------~~rvl 90 (237)
T d1gkub1 21 LCLFPEDFLLKEFV-EFFRKCVGEPRAIQKMWAKRILRKESFAATAPTGVGKTSFGLAMSLFLALK---------GKRCY 90 (237)
T ss_dssp CSCCTTHHHHHHHH-HHHHTTTCSCCHHHHHHHHHHHTTCCEECCCCBTSCSHHHHHHHHHHHHTT---------SCCEE
T ss_pred cccCccchhHHHHH-HHHHhccCCCCHHHHHHHHHHHCCCCEEEEecCCChHHHHHHHHHHHHHHh---------cCeEE
Confidence 34455544455544 455668999999999999999999999999999999999999999877643 56899
Q ss_pred EEccchhHHHhh---------------------------------------------hhhhHHHHHHHhcCcceecccce
Q 042373 200 VMAPTGELVRQQ---------------------------------------------VRRGRMIDLLCKNGVKITNLTRV 234 (494)
Q Consensus 200 Il~PTreLa~Qi---------------------------------------------~TPgrl~dll~~~~~~~~~l~~l 234 (494)
||+||++|+.|+ +||++|.+. ...++++
T Consensus 91 iv~Pt~~La~Q~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Ilv~Tp~~l~~~-------~~~~~~~ 163 (237)
T d1gkub1 91 VIFPTSLLVIQAAETIRKYAEKAGVGTENLIGYYHGRIPKREKENFMQNLRNFKIVITTTQFLSKH-------YRELGHF 163 (237)
T ss_dssp EEESCHHHHHHHHHHHHHHHTTTCCSGGGSEEECCSSCCSHHHHHHHHSGGGCSEEEEEHHHHHHC-------STTSCCC
T ss_pred EEeccHHHHHHHHHHHHHHHHHcCCceEEEEeeeecccchhhhhhhhccccccceeccChHHHHHh-------hhhcCCC
Confidence 999999999997 456554332 2346789
Q ss_pred EEEEEcccchhcccCC-----------hhHHHHHHHhhcCCCcEEEecCCCChHHH
Q 042373 235 TYLVLDEADRMFDMGF-----------EPQITRIVQNIRPDRQAVLFSPTFPPRVE 279 (494)
Q Consensus 235 ~~lVlDEaD~ml~~gf-----------~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~ 279 (494)
++|||||||.|++.+. ...+..+....+...|++++|||+++.+.
T Consensus 164 ~~vVvDE~d~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~SAT~~~~~~ 219 (237)
T d1gkub1 164 DFIFVDDVDAILKASKNVDKLLHLLGFHYDLKTKSWVGEARGCLMVSTATAKKGKK 219 (237)
T ss_dssp SEEEESCHHHHHTSTHHHHHHHHHTTEEEETTTTEEEECCSSEEEECCCCSCCCTT
T ss_pred CEEEEEChhhhhhcccchhHHHHhcCChHHHHHHHhhCCCCCeEEEEeCCCCcccH
Confidence 9999999999987542 22222222223457899999999987543
No 13
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.90 E-value=4.6e-24 Score=199.78 Aligned_cols=144 Identities=19% Similarity=0.215 Sum_probs=118.8
Q ss_pred CCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhH
Q 042373 128 LTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL 207 (494)
Q Consensus 128 L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreL 207 (494)
+++.++..|++.||.+|+|+|.++++.+++|+|+++++|||||||++++++++..+.. ++++||++||++|
T Consensus 10 ~~~~~~~~l~~~g~~~l~~~Q~~ai~~l~~~~~~il~apTGsGKT~~a~l~i~~~~~~---------~~~vl~l~P~~~L 80 (202)
T d2p6ra3 10 ISSYAVGILKEEGIEELFPPQAEAVEKVFSGKNLLLAMPTAAGKTLLAEMAMVREAIK---------GGKSLYVVPLRAL 80 (202)
T ss_dssp HHHHHHHHHHCC---CCCCCCHHHHHHHTTCSCEEEECSSHHHHHHHHHHHHHHHHHT---------TCCEEEEESSHHH
T ss_pred hhHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCEEEEcCCCCchhHHHHHHHHHHhhc---------cCcceeecccHHH
Confidence 6788999999999999999999999999999999999999999999999999988764 5579999999999
Q ss_pred HHhh-----------------------------------hhhhHHHHHHHhcCcceecccceEEEEEcccchhcccCChh
Q 042373 208 VRQQ-----------------------------------VRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEP 252 (494)
Q Consensus 208 a~Qi-----------------------------------~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~~gf~~ 252 (494)
+.|+ +||..+..++.... ..+.++++||+||+|++.+.++..
T Consensus 81 ~~q~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~---~~~~~~~~ii~DE~h~~~~~~r~~ 157 (202)
T d2p6ra3 81 AGEKYESFKKWEKIGLRIGISTGDYESRDEHLGDCDIIVTTSEKADSLIRNRA---SWIKAVSCLVVDEIHLLDSEKRGA 157 (202)
T ss_dssp HHHHHHHHTTTTTTTCCEEEECSSCBCCSSCSTTCSEEEEEHHHHHHHHHTTC---SGGGGCCEEEETTGGGGGCTTTHH
T ss_pred HHHHHHHHHHHhhccccceeeccCcccccccccccceeeeccHHHHHHHhccc---hhhhhhhhccccHHHHhcccccch
Confidence 9997 67777777666532 468899999999999999887766
Q ss_pred HHHHHHH---hhcCCCcEEEecCCCChHHHHHHHh
Q 042373 253 QITRIVQ---NIRPDRQAVLFSPTFPPRVEILARK 284 (494)
Q Consensus 253 ~i~~Il~---~l~~~~Q~ilfSAT~~~~v~~l~~~ 284 (494)
.+..++. ..++..|++++|||+++ ...+++.
T Consensus 158 ~~~~~l~~i~~~~~~~~~l~lSATl~n-~~~~~~~ 191 (202)
T d2p6ra3 158 TLEILVTKMRRMNKALRVIGLSATAPN-VTEIAEW 191 (202)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEECCCTT-HHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcEEEEcCCCCc-HHHHHHH
Confidence 6555544 44678899999999976 4555543
No 14
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.76 E-value=1.3e-18 Score=160.92 Aligned_cols=128 Identities=21% Similarity=0.151 Sum_probs=101.7
Q ss_pred CCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh----------
Q 042373 142 ENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ---------- 211 (494)
Q Consensus 142 ~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi---------- 211 (494)
-+|.++|..++..+. ++|+|+++|||||||+++++++...+... +.++||++|+++|+.|+
T Consensus 8 ~~pr~~Q~~~~~~~~-~~n~lv~~pTGsGKT~i~~~~~~~~~~~~--------~~~il~i~P~~~L~~q~~~~~~~~~~~ 78 (200)
T d1wp9a1 8 IQPRIYQEVIYAKCK-ETNCLIVLPTGLGKTLIAMMIAEYRLTKY--------GGKVLMLAPTKPLVLQHAESFRRLFNL 78 (200)
T ss_dssp HCCCHHHHHHHHHGG-GSCEEEECCTTSCHHHHHHHHHHHHHHHS--------CSCEEEECSSHHHHHHHHHHHHHHBCS
T ss_pred CCCCHHHHHHHHHHh-cCCeEEEeCCCCcHHHHHHHHHHHHHHhc--------CCcEEEEcCchHHHHHHHHHHHHhhcc
Confidence 379999999998875 67899999999999999999888776543 45799999999999997
Q ss_pred ----------------------------hhhhHHHHHHHhcCcceecccceEEEEEcccchhcccCChhHHHHHHHhhcC
Q 042373 212 ----------------------------VRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRP 263 (494)
Q Consensus 212 ----------------------------~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~ 263 (494)
+||.++...+... ...++++++||+||||++........+...+.....
T Consensus 79 ~~~~v~~~~~~~~~~~~~~~~~~~~i~i~t~~~~~~~~~~~---~~~~~~~~~vIiDE~H~~~~~~~~~~~~~~~~~~~~ 155 (200)
T d1wp9a1 79 PPEKIVALTGEKSPEERSKAWARAKVIVATPQTIENDLLAG---RISLEDVSLIVFDEAHRAVGNYAYVFIAREYKRQAK 155 (200)
T ss_dssp CGGGEEEECSCSCHHHHHHHHHHCSEEEECHHHHHHHHHTT---SCCTTSCSEEEEETGGGCSTTCHHHHHHHHHHHHCS
T ss_pred cccceeeeecccchhHHHHhhhcccccccccchhHHHHhhh---hhhccccceEEEEehhhhhcchhHHHHHHHHHhcCC
Confidence 6888888777664 346789999999999998865544444444455566
Q ss_pred CCcEEEecCCCChHHHHH
Q 042373 264 DRQAVLFSPTFPPRVEIL 281 (494)
Q Consensus 264 ~~Q~ilfSAT~~~~v~~l 281 (494)
.++++++|||.+.....+
T Consensus 156 ~~~~l~~SATp~~~~~~~ 173 (200)
T d1wp9a1 156 NPLVIGLTASPGSTPEKI 173 (200)
T ss_dssp SCCEEEEESCSCSSHHHH
T ss_pred CCcEEEEEecCCCcHHHH
Confidence 789999999986554443
No 15
>d1fuka_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.74 E-value=7.8e-19 Score=159.22 Aligned_cols=103 Identities=22% Similarity=0.357 Sum_probs=83.8
Q ss_pred CcEEEecCCCChHHHHHHHh---cCCccceeeccccccCCCCCCceEEEecCCCCCHhHHHhhhccCCC---cceEEEEe
Q 042373 265 RQAVLFSPTFPPRVEILARK---TNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFI 338 (494)
Q Consensus 265 ~Q~ilfSAT~~~~v~~l~~~---~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~s~~~yvhR~GRaGr---~G~aitfv 338 (494)
..+..+.+-++..-..-+.. .|..+||||||+++||+|+++|++|||||+|.+.+.|+||+||+|| .|.|++|+
T Consensus 52 ~~~~~~~~~~~~~~r~~~l~~f~~~~~~iLv~Tdv~~rGiDi~~v~~VI~~d~P~~~~~yihR~GR~gR~g~~g~~i~~~ 131 (162)
T d1fuka_ 52 FTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFV 131 (162)
T ss_dssp CCEEEECTTSCHHHHHHHHHHHHTTSCSEEEEEGGGTTTCCCCSCSEEEESSCCSSGGGGGGSSCSCC-----CEEEEEE
T ss_pred ceEEEeccCCchhhHHHHHHHHhhcccceeeccccccccccCCCceEEEEeccchhHHHHHhhccccccCCCccEEEEEc
Confidence 34444555555443322211 8999999999999999999999999999999999999999999655 77799999
Q ss_pred cccCHHHHHHHHHHHHhccCcchHHHHHH
Q 042373 339 SEENAIYATDLVKAFELSELVVRDDLKAV 367 (494)
Q Consensus 339 ~~~~~~~~~~i~~~l~~~~~~vp~~l~~~ 367 (494)
++.+...+..|++.++...+++|.++.++
T Consensus 132 ~~~d~~~~~~i~~~~~~~~~~ip~~~~~l 160 (162)
T d1fuka_ 132 TNEDVGAMRELEKFYSTQIEELPSDIATL 160 (162)
T ss_dssp ETTTHHHHHHHHHHSSCCCEECCSCCTTT
T ss_pred CHHHHHHHHHHHHHHcCcCCCCChHHHHh
Confidence 99999999999999999999999876543
No 16
>d2j0sa2 c.37.1.19 (A:244-411) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=2.5e-18 Score=156.75 Aligned_cols=80 Identities=26% Similarity=0.420 Sum_probs=74.0
Q ss_pred cCCccceeeccccccCCCCCCceEEEecCCCCCHhHHHhhhccCCC---cceEEEEecccCHHHHHHHHHHHHhccCcch
Q 042373 285 TNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATDLVKAFELSELVVR 361 (494)
Q Consensus 285 ~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~s~~~yvhR~GRaGr---~G~aitfv~~~~~~~~~~i~~~l~~~~~~vp 361 (494)
.|+.+||||||+++||||+|+|++|||||+|.+.+.|+||+||+|| .|.+|+|+++.+...+..|.+.++...+++|
T Consensus 82 ~g~~~iLv~Td~~~rGiDi~~v~~VIn~d~P~~~~~yihR~GR~gR~g~~G~~i~~~~~~d~~~~~~i~~~~~~~i~e~p 161 (168)
T d2j0sa2 82 SGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMP 161 (168)
T ss_dssp HTSSCEEEECGGGSSSCCCTTEEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEEGGGHHHHHHHHHHTTCCCEECC
T ss_pred cCCccEEeccchhcccccccCcceEEEecCCcCHHHHHhhhccccccCCCcEEEEEECHHHHHHHHHHHHHHcCcCCCCC
Confidence 8999999999999999999999999999999999999999999655 6899999999999999999999988888888
Q ss_pred HHH
Q 042373 362 DDL 364 (494)
Q Consensus 362 ~~l 364 (494)
..+
T Consensus 162 ~~~ 164 (168)
T d2j0sa2 162 MNV 164 (168)
T ss_dssp SCC
T ss_pred cCh
Confidence 543
No 17
>d1s2ma2 c.37.1.19 (A:252-422) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.72 E-value=1.1e-17 Score=152.56 Aligned_cols=102 Identities=15% Similarity=0.195 Sum_probs=86.2
Q ss_pred CCcEEEecCCCChHHHHHHHh---cCCccceeeccccccCCCCCCceEEEecCCCCCHhHHHhhhccCC---CcceEEEE
Q 042373 264 DRQAVLFSPTFPPRVEILARK---TNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSW---LKSCAFRF 337 (494)
Q Consensus 264 ~~Q~ilfSAT~~~~v~~l~~~---~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~s~~~yvhR~GRaG---r~G~aitf 337 (494)
+..+..+.+.++..-...+.. .|..+|||||++++||+|++++++|||||+|.++..|+||+||+| +.|.+|+|
T Consensus 56 g~~~~~~h~~~~~~~r~~~~~~f~~~~~~ilv~Td~~~~Gid~~~v~~VI~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~ 135 (171)
T d1s2ma2 56 GYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINL 135 (171)
T ss_dssp TCCEEEECTTSCHHHHHHHHHHHHTTSSSEEEESSCSSSSCCCTTEEEEEESSCCSSHHHHHHHHCBSSCTTCCEEEEEE
T ss_pred cccccccccccchhhhhhhhhhcccCccccccchhHhhhccccceeEEEEecCCcchHHHHHHHhhhcccCCCccEEEEE
Confidence 455666677666544332222 899999999999999999999999999999999999999999954 58899999
Q ss_pred ecccCHHHHHHHHHHHHhccCcchHHHH
Q 042373 338 ISEENAIYATDLVKAFELSELVVRDDLK 365 (494)
Q Consensus 338 v~~~~~~~~~~i~~~l~~~~~~vp~~l~ 365 (494)
+++.+...+..|.+.++....++|..+.
T Consensus 136 v~~~e~~~~~~i~~~l~~~~~~~p~~~d 163 (171)
T d1s2ma2 136 INWNDRFNLYKIEQELGTEIAAIPATID 163 (171)
T ss_dssp ECGGGHHHHHHHHHHHTCCCEECCSSCC
T ss_pred eCHHHHHHHHHHHHHHCCCCCCCCcccc
Confidence 9999999999999999988888887653
No 18
>d1oywa3 c.37.1.19 (A:207-406) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=99.64 E-value=4.4e-16 Score=145.65 Aligned_cols=65 Identities=15% Similarity=0.307 Sum_probs=59.3
Q ss_pred cCCccceeeccccccCCCCCCceEEEecCCCCCHhHHHhhhccCCC---cceEEEEecccCHHHHHHH
Q 042373 285 TNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEENAIYATDL 349 (494)
Q Consensus 285 ~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~s~~~yvhR~GRaGr---~G~aitfv~~~~~~~~~~i 349 (494)
.|+.+|||||++++||||+|+|++|||||+|.++.+|+||+||+|| .|.|++|+++.+..++..+
T Consensus 78 ~g~~~ilvaTd~~~~GiD~p~v~~VI~~~~P~~~~~y~qr~GR~gR~g~~g~ai~~~~~~d~~~l~~~ 145 (200)
T d1oywa3 78 RDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRC 145 (200)
T ss_dssp TTSCSEEEECTTSCTTTCCTTCCEEEESSCCSSHHHHHHHHTTSCTTSSCEEEEEEECHHHHHHHHHH
T ss_pred cccceEEEecchhhhccCCCCCCEEEECCCccchHHHHHHhhhhhcCCCCceEEEecCHHHHHHHHhh
Confidence 8999999999999999999999999999999999999999999655 7899999999877666544
No 19
>d1hv8a2 c.37.1.19 (A:211-365) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.64 E-value=3.8e-16 Score=139.90 Aligned_cols=74 Identities=26% Similarity=0.357 Sum_probs=67.7
Q ss_pred cCCccceeeccccccCCCCCCceEEEecCCCCCHhHHHhhhccCC---CcceEEEEecccCHHHHHHHHHHHHhccC
Q 042373 285 TNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSW---LKSCAFRFISEENAIYATDLVKAFELSEL 358 (494)
Q Consensus 285 ~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~s~~~yvhR~GRaG---r~G~aitfv~~~~~~~~~~i~~~l~~~~~ 358 (494)
.|..+|||||++++||||+++|++|||||+|.++..|+||+||+| +.|.+|+|+++.+...+..|.+.++....
T Consensus 76 ~~~~~ilv~T~~~~~Gid~~~v~~Vi~~d~p~~~~~y~qr~GR~gR~g~~g~~i~~~~~~d~~~~~~i~~~~~~~i~ 152 (155)
T d1hv8a2 76 QKKIRILIATDVMSRGIDVNDLNCVINYHLPQNPESYMHRIGRTGRAGKKGKAISIINRREYKKLRYIERAMKLKIK 152 (155)
T ss_dssp TTSSSEEEECTTHHHHCCCSCCSEEEESSCCSCHHHHHHHSTTTCCSSSCCEEEEEECTTSHHHHHHHHHHHTCCCC
T ss_pred cccceeeeehhHHhhhhhhccCcEEEEecCCCCHHHHHHHHHhcCcCCCCceEEEEEchHHHHHHHHHHHHHCCCcc
Confidence 899999999999999999999999999999999999999999955 57889999999999999999888876543
No 20
>d2rb4a1 c.37.1.19 (A:307-474) ATP-dependent RNA helicase DDX25 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.64 E-value=3.3e-16 Score=142.43 Aligned_cols=97 Identities=27% Similarity=0.363 Sum_probs=78.9
Q ss_pred CcEEEecCCCChHHHHHHHh---cCCccceeeccccccCCCCCCceEEEecCCCC------CHhHHHhhhccC---CCcc
Q 042373 265 RQAVLFSPTFPPRVEILARK---TNVCNLSIANSVRARGLDEKELELVINFDAPN------DYEDYVHHCCQS---WLKS 332 (494)
Q Consensus 265 ~Q~ilfSAT~~~~v~~l~~~---~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~------s~~~yvhR~GRa---Gr~G 332 (494)
..+..++.-++..-...+.. .|..++||||++++||||+++|++|||||+|. +.++|+||+||+ |+.|
T Consensus 57 ~~~~~~hg~~~~~~R~~~~~~F~~g~~~ilv~Td~~~~Gid~~~v~~Vi~yd~P~~~~~~~~~~~yihR~GR~gR~g~~g 136 (168)
T d2rb4a1 57 HQVSLLSGELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRFGKKG 136 (168)
T ss_dssp CCEEEECSSCCHHHHHHHHHHHHTTSCSEEEECCSCCTTTCCTTEEEEEESSCCC--CCSCCHHHHHHHHCBC----CCE
T ss_pred CcceecccchhhHHHHHHhhhhcCCceeeeechhhhhhhhccccccEEEeecCCCcccccCCHHHHHHHhhhcccCCCce
Confidence 44555555555544332222 89999999999999999999999999999998 578999999994 5578
Q ss_pred eEEEEecccCHHHHHHHHHHHHhccCcch
Q 042373 333 CAFRFISEENAIYATDLVKAFELSELVVR 361 (494)
Q Consensus 333 ~aitfv~~~~~~~~~~i~~~l~~~~~~vp 361 (494)
.||+|+++.+...+..|.+.++....++|
T Consensus 137 ~~i~~~~~~d~~~l~~i~~~~~~~i~el~ 165 (168)
T d2rb4a1 137 LAFNMIEVDELPSLMKIQDHFNSSIKQLN 165 (168)
T ss_dssp EEEEEECGGGHHHHHHHHHHHTCCCEEEC
T ss_pred EEEEEEcHHHHHHHHHHHHHHCCCCCcCC
Confidence 99999999999999999999888777666
No 21
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=99.60 E-value=8.8e-16 Score=132.14 Aligned_cols=106 Identities=20% Similarity=0.249 Sum_probs=77.2
Q ss_pred HcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh------------------------
Q 042373 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ------------------------ 211 (494)
Q Consensus 156 l~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi------------------------ 211 (494)
..|+++++++|||||||..++..++...... +.++||++|+++|+.|.
T Consensus 5 ~~~~~~il~~~tGsGKT~~~~~~~~~~~~~~--------~~~vli~~p~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (140)
T d1yksa1 5 KKGMTTVLDFHPGAGKTRRFLPQILAECARR--------RLRTLVLAPTRVVLSEMKEAFHGLDVKFHTQAFSAHGSGRE 76 (140)
T ss_dssp STTCEEEECCCTTSSTTTTHHHHHHHHHHHT--------TCCEEEEESSHHHHHHHHHHTTTSCEEEESSCCCCCCCSSC
T ss_pred HcCCcEEEEcCCCCChhHHHHHHHHHHhhhc--------CceeeeeecchhHHHHHHHHhhhhhhhhccccccccccccc
Confidence 3689999999999999999887777776553 56899999999999998
Q ss_pred ----hhhhHHHHHHHhcCcceecccceEEEEEcccchhcccCCh--hHHHHHHHhhcCCCcEEEecCCCC
Q 042373 212 ----VRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFE--PQITRIVQNIRPDRQAVLFSPTFP 275 (494)
Q Consensus 212 ----~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~~gf~--~~i~~Il~~l~~~~Q~ilfSAT~~ 275 (494)
++...+..... ....+.++++||+||||++...++. ..+..+. . .+..+++++|||.|
T Consensus 77 ~~~~~~~~~l~~~~~----~~~~~~~~~lvIiDEaH~~~~~~~~~~~~~~~~~-~-~~~~~~l~lTATPp 140 (140)
T d1yksa1 77 VIDAMCHATLTYRML----EPTRVVNWEVIIMDEAHFLDPASIAARGWAAHRA-R-ANESATILMTATPP 140 (140)
T ss_dssp CEEEEEHHHHHHHHT----SSSCCCCCSEEEETTTTCCSHHHHHHHHHHHHHH-H-TTSCEEEEECSSCT
T ss_pred chhhhhHHHHHHHHh----ccccccceeEEEEccccccChhhHHHHHHHHHHh-h-CCCCCEEEEEcCCC
Confidence 33344333322 2346789999999999987544322 2222222 2 35789999999987
No 22
>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=99.58 E-value=1.7e-15 Score=139.39 Aligned_cols=77 Identities=12% Similarity=0.115 Sum_probs=62.7
Q ss_pred CCcEEEecCCCChHHHHHHHh---cCCccceeeccccccCCCCCCceEEEecCCCC-----CHhHHHhhhccCCCcceEE
Q 042373 264 DRQAVLFSPTFPPRVEILARK---TNVCNLSIANSVRARGLDEKELELVINFDAPN-----DYEDYVHHCCQSWLKSCAF 335 (494)
Q Consensus 264 ~~Q~ilfSAT~~~~v~~l~~~---~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~-----s~~~yvhR~GRaGr~G~ai 335 (494)
+..+..+++-++..-..-+.. .|+++|||||++++||||+|+|++|||||+|. +...|+||+||+||.|.+.
T Consensus 55 g~~~~~~hg~~~~~eR~~~l~~Fr~g~~~vLVaTdv~~rGiDip~v~~VI~~d~p~~~~~~s~~~yi~R~GRagR~g~~~ 134 (181)
T d1t5la2 55 GIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNANGH 134 (181)
T ss_dssp TCCEEEECSSCCHHHHHHHHHHHHHTSCSEEEESCCCSSSCCCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTTCE
T ss_pred CcceeEecCCccHHHHHHHHHHHHCCCCCEEEehhHHHccCCCCCCCEEEEecCCcccccccHHHHHHHHHhhccccCce
Confidence 556677777777654333322 99999999999999999999999999999996 6899999999999987666
Q ss_pred EEecc
Q 042373 336 RFISE 340 (494)
Q Consensus 336 tfv~~ 340 (494)
+++..
T Consensus 135 ~~~~~ 139 (181)
T d1t5la2 135 VIMYA 139 (181)
T ss_dssp EEEEC
T ss_pred eEeec
Confidence 55543
No 23
>d1t5ia_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.51 E-value=1.7e-14 Score=130.90 Aligned_cols=101 Identities=23% Similarity=0.411 Sum_probs=82.3
Q ss_pred CCcEEEecCCCChHHHHHHH---hcCCccceeeccccccCCCCCCceEEEecCCCCCHhHHHhhhccC---CCcceEEEE
Q 042373 264 DRQAVLFSPTFPPRVEILAR---KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQS---WLKSCAFRF 337 (494)
Q Consensus 264 ~~Q~ilfSAT~~~~v~~l~~---~~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~s~~~yvhR~GRa---Gr~G~aitf 337 (494)
...+..+.+-++..-....- +.|.++|||||+++++|+|+|++++|||||+|.+...|+||+||+ |+.|.||+|
T Consensus 51 ~~~~~~ihg~~~~~~r~~~l~~F~~g~~~iLv~T~~~~~Gid~~~~~~vi~~~~p~~~~~yiqr~GR~gR~g~~g~~i~l 130 (168)
T d1t5ia_ 51 NFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITF 130 (168)
T ss_dssp TCCEEEECTTSCHHHHHHHHHHHHTTSCSEEEESSCCSTTCCGGGCSEEEESSCCSSHHHHHHHHHHHTGGGCCCEEEEE
T ss_pred cccccccccccchhhhhhhhhhhccccceeeeccccccchhhcccchhhhhhhcccchhhHhhhhhhcccCCCccEEEEE
Confidence 45667777777765433222 289999999999999999999999999999999999999999885 457889999
Q ss_pred eccc-CHHHHHHHHHHHHhccCcchHHH
Q 042373 338 ISEE-NAIYATDLVKAFELSELVVRDDL 364 (494)
Q Consensus 338 v~~~-~~~~~~~i~~~l~~~~~~vp~~l 364 (494)
+++. +...+..+.+.++....++|+++
T Consensus 131 ~~~~~~~~~~~~i~~~~~~~~~elp~~~ 158 (168)
T d1t5ia_ 131 VSDENDAKILNDVQDRFEVNISELPDEI 158 (168)
T ss_dssp ECSHHHHHHHHHHHHHHCCCEEECC---
T ss_pred ECchHHHHHHHHHHHHHcCCcccCCchh
Confidence 9875 56788889999998888899876
No 24
>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=99.44 E-value=1.7e-13 Score=124.74 Aligned_cols=79 Identities=11% Similarity=0.089 Sum_probs=59.7
Q ss_pred CCcEEEecCCCChHHHHHHHh---cCCccceeeccccccCCCCCCceEEEecCCCC-----CHhHHHhhhccCCCc--ce
Q 042373 264 DRQAVLFSPTFPPRVEILARK---TNVCNLSIANSVRARGLDEKELELVINFDAPN-----DYEDYVHHCCQSWLK--SC 333 (494)
Q Consensus 264 ~~Q~ilfSAT~~~~v~~l~~~---~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~-----s~~~yvhR~GRaGr~--G~ 333 (494)
+.....+++-++..-..-+.. .|+++|||||++++||||+|+|++|||||.|. +.+.|+||+||+||. |.
T Consensus 55 Gi~a~~~Hg~~~~~eR~~~l~~F~~G~~~vLVaT~v~~~GiDip~V~~Vi~~~~~~~~~~~~~~~~iq~~GR~gR~~~g~ 134 (174)
T d1c4oa2 55 GIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNARGE 134 (174)
T ss_dssp TCCEEEECTTCCHHHHHHHHHHHHTTSCSEEEESCCCCTTCCCTTEEEEEETTTTSCSGGGSHHHHHHHHGGGTTSTTCE
T ss_pred CCceEEEecccchHHHHHHHHHHHCCCeEEEEeeeeeeeeccCCCCcEEEEeccccccccchhHHHHHHhhhhhhcCCCe
Confidence 455566666666544332222 89999999999999999999999999999765 568899999999885 55
Q ss_pred EEEEecccC
Q 042373 334 AFRFISEEN 342 (494)
Q Consensus 334 aitfv~~~~ 342 (494)
++.+.....
T Consensus 135 ~~~~~~~~~ 143 (174)
T d1c4oa2 135 VWLYADRVS 143 (174)
T ss_dssp EEEECSSCC
T ss_pred eEEeecCCC
Confidence 555555443
No 25
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.43 E-value=1.3e-13 Score=128.70 Aligned_cols=109 Identities=21% Similarity=0.156 Sum_probs=79.7
Q ss_pred CCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh-----------
Q 042373 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ----------- 211 (494)
Q Consensus 143 ~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi----------- 211 (494)
+|.++|.+++..++.++..++.+|||+|||+.++..+ ..+ +.++||+||++.|+.|.
T Consensus 70 ~Lr~yQ~eav~~~~~~~~~ll~~~tG~GKT~~a~~~~-~~~-----------~~~~Liv~p~~~L~~q~~~~~~~~~~~~ 137 (206)
T d2fz4a1 70 SLRDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAAI-NEL-----------STPTLIVVPTLALAEQWKERLGIFGEEY 137 (206)
T ss_dssp CCCHHHHHHHHHHTTTSEEEEEESSSTTHHHHHHHHH-HHS-----------CSCEEEEESSHHHHHHHHHHHGGGCGGG
T ss_pred CcCHHHHHHHHHHHhCCCcEEEeCCCCCceehHHhHH-HHh-----------cCceeEEEcccchHHHHHHHHHhhcccc
Confidence 6899999999999999999999999999998765433 322 34689999999999997
Q ss_pred ----------------hhhhHHHHHHHhcCcceecccceEEEEEcccchhcccCChhHHHHHHHhhcCCCcEEEecCCC
Q 042373 212 ----------------VRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPTF 274 (494)
Q Consensus 212 ----------------~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfSAT~ 274 (494)
+|...+...... ...++.+||+||||++.. +....++..++ .+..+++|||+
T Consensus 138 ~~~~~~~~~~~~~i~i~t~~~~~~~~~~------~~~~~~lvIiDEaH~~~a----~~~~~i~~~~~-~~~~lgLTATl 205 (206)
T d2fz4a1 138 VGEFSGRIKELKPLTVSTYDSAYVNAEK------LGNRFMLLIFDEVHHLPA----ESYVQIAQMSI-APFRLGLTATF 205 (206)
T ss_dssp EEEESSSCBCCCSEEEEEHHHHHHTHHH------HTTTCSEEEEECSSCCCT----TTHHHHHHTCC-CSEEEEEEESC
T ss_pred hhhcccccccccccccceehhhhhhhHh------hCCcCCEEEEECCeeCCc----HHHHHHHhccC-CCcEEEEecCC
Confidence 222222211111 145788999999999753 34556666553 44568899997
No 26
>d1rifa_ c.37.1.23 (A:) DNA helicase UvsW {Bacteriophage T4 [TaxId: 10665]}
Probab=99.40 E-value=1.9e-13 Score=133.85 Aligned_cols=116 Identities=17% Similarity=0.112 Sum_probs=85.3
Q ss_pred CCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhhh----------
Q 042373 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQV---------- 212 (494)
Q Consensus 143 ~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi~---------- 212 (494)
+|.++|..++..++..+..++.+|||+|||+....-+ ..+.... ..++|||+|+++|+.|.+
T Consensus 113 ~~rdyQ~~av~~~l~~~~~il~~pTGsGKT~i~~~i~-~~~~~~~-------~~k~Liivp~~~Lv~Q~~~~f~~~~~~~ 184 (282)
T d1rifa_ 113 EPHWYQKDAVFEGLVNRRRILNLPTSAGRSLIQALLA-RYYLENY-------EGKILIIVPTTALTTQMADDFVDYRLFS 184 (282)
T ss_dssp CCCHHHHHHHHHHHHHSEEEECCCTTSCHHHHHHHHH-HHHHHHC-------SSEEEEECSSHHHHHHHHHHHHHHTSCC
T ss_pred ccchHHHHHHHHHHhcCCceeEEEcccCccHHHHHHH-HHhhhcc-------cceEEEEEcCchhHHHHHHHHHHhhccc
Confidence 6999999999999999999999999999998765533 3333321 347999999999999982
Q ss_pred --------------------------hhhHHHHHHHhcCcceecccceEEEEEcccchhcccCChhHHHHHHHhhcCCCc
Q 042373 213 --------------------------RRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQ 266 (494)
Q Consensus 213 --------------------------TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q 266 (494)
|...+ ... ....++++++||+||||++- .+.+..|+..+.+...
T Consensus 185 ~~~~~~~~~g~~~~~~~~~~~~i~i~t~qs~----~~~--~~~~~~~f~~VIvDEaH~~~----a~~~~~il~~~~~~~~ 254 (282)
T d1rifa_ 185 HAMIKKIGGGASKDDKYKNDAPVVVGTWQTV----VKQ--PKEWFSQFGMMMNDECHLAT----GKSISSIISGLNNCMF 254 (282)
T ss_dssp GGGEEECSTTCSSTTCCCTTCSEEEECHHHH----TTS--CGGGGGGEEEEEEETGGGCC----HHHHHHHTTTCTTCCE
T ss_pred cccceeecceecccccccccceEEEEeeehh----hhh--cccccCCCCEEEEECCCCCC----chhHHHHHHhccCCCe
Confidence 21111 110 11235689999999999865 3566777777755555
Q ss_pred EEEecCCCCh
Q 042373 267 AVLFSPTFPP 276 (494)
Q Consensus 267 ~ilfSAT~~~ 276 (494)
.++||||++.
T Consensus 255 rlGlTaT~~~ 264 (282)
T d1rifa_ 255 KFGLSGSLRD 264 (282)
T ss_dssp EEEECSSCCT
T ss_pred EEEEEeecCC
Confidence 6899999864
No 27
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.36 E-value=3.3e-13 Score=117.01 Aligned_cols=98 Identities=17% Similarity=0.028 Sum_probs=65.6
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh--------------------------
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ-------------------------- 211 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi-------------------------- 211 (494)
.+..++.+|||||||+.+...+ ... +.++||++||++|+.|+
T Consensus 8 ~~~~ll~apTGsGKT~~~~~~~----~~~--------~~~vli~~P~~~l~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (136)
T d1a1va1 8 FQVAHLHAPTGSGKSTKVPAAY----AAQ--------GYKVLVLNPSVAATLGFGAYMSKAHGVDPNIRTGVRTITTGSP 75 (136)
T ss_dssp CEEEEEECCTTSCTTTHHHHHH----HTT--------TCCEEEEESCHHHHHHHHHHHHHHHSCCCEEECSSCEECCCCS
T ss_pred CCEEEEEeCCCCCHHHHHHHHH----HHc--------CCcEEEEcChHHHHHHHHHHHHHHhhccccccccccccccccc
Confidence 3567999999999997543222 221 66899999999999998
Q ss_pred ---hhhhHHHHHHHhcCcceecccceEEEEEcccchhcccCChhHHHHHHHhhc--CCCcEEEecCCC
Q 042373 212 ---VRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIR--PDRQAVLFSPTF 274 (494)
Q Consensus 212 ---~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~--~~~Q~ilfSAT~ 274 (494)
+|.+.+.... ...++++++||+||+|++-. .....+..+++.++ +...++++|||.
T Consensus 76 ~~~~~~~~~~~~~------~~~~~~~~~vIiDE~H~~~~-~~~~~~~~~l~~~~~~~~~~~l~~TATP 136 (136)
T d1a1va1 76 ITYSTYGKFLADG------GCSGGAYDIIICDECHSTDA-TSILGIGTVLDQAETAGARLVVLATATP 136 (136)
T ss_dssp EEEEEHHHHHHTT------GGGGCCCSEEEEETTTCCSH-HHHHHHHHHHHHTTTTTCSEEEEEESSC
T ss_pred eEEEeeeeecccc------chhhhcCCEEEEecccccCH-HHHHHHHHHHHHHHHCCCCcEEEEeCCC
Confidence 2333322111 12478899999999997632 12223555555543 466789999993
No 28
>d1jr6a_ c.37.1.14 (A:) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=99.35 E-value=4.2e-13 Score=117.86 Aligned_cols=56 Identities=18% Similarity=0.281 Sum_probs=50.2
Q ss_pred cCCccceeeccccccCCCCCCceEEEecC----CCCCHhHHHhhhccCCC--cceEEEEecccC
Q 042373 285 TNVCNLSIANSVRARGLDEKELELVINFD----APNDYEDYVHHCCQSWL--KSCAFRFISEEN 342 (494)
Q Consensus 285 ~g~~~ILVaTdv~~rGlDi~~v~~VInyd----~P~s~~~yvhR~GRaGr--~G~aitfv~~~~ 342 (494)
.++.+||||||+++|||| ++|++||||| +|.+.++|+||+||+|| .| .++|+++.+
T Consensus 76 ~~~~~vlvaTd~~~~GiD-~~v~~Vi~~~~~~~~P~~~~~y~qr~GR~gRg~~G-~~~~i~~~e 137 (138)
T d1jr6a_ 76 TNGDVVVVATDALMTGFT-GDFDSVIDCNTSDGKPQDAVSRTQRRGRTGRGKPG-IYRFVAPGE 137 (138)
T ss_dssp TSSCEEEEESSSSCSSSC-CCBSEEEECSEETTEECCHHHHHHHHTTBCSSSCE-EEEECCSSC
T ss_pred hhhcceeehhHHHHhccc-cccceEEEEEecCCCCCCHHHHHhHhccccCCCCc-EEEEEcCCC
Confidence 789999999999999999 9999999865 69999999999999887 66 578988875
No 29
>d1wp9a2 c.37.1.19 (A:201-486) putative ATP-dependent RNA helicase PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Probab=99.35 E-value=6.8e-13 Score=129.44 Aligned_cols=59 Identities=17% Similarity=0.221 Sum_probs=55.1
Q ss_pred cCCccceeeccccccCCCCCCceEEEecCCCCCHhHHHhhhccCCC--cceEEEEecccCH
Q 042373 285 TNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWL--KSCAFRFISEENA 343 (494)
Q Consensus 285 ~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~s~~~yvhR~GRaGr--~G~aitfv~~~~~ 343 (494)
.|.++|||||+++++|||+|+|++|||||+|.++..|+||+||+|| .|.+++|+++...
T Consensus 217 ~g~~~vLv~T~~~~~Gld~~~~~~Vi~~d~~~~~~~~~Qr~GR~gR~~~~~~~~l~~~~~~ 277 (286)
T d1wp9a2 217 RGEFNVLVATSVGEEGLDVPEVDLVVFYEPVPSAIRSIQRRGRTGRHMPGRVIILMAKGTR 277 (286)
T ss_dssp HTSCSEEEECGGGGGGGGSTTCCEEEESSCCHHHHHHHHHHTTSCSCCCSEEEEEEETTSH
T ss_pred cCCCcEEEEccceeccccCCCCCEEEEeCCCCCHHHHHHHHHhCCCCCCCEEEEEEeCCCH
Confidence 7899999999999999999999999999999999999999999877 5889999998743
No 30
>d2eyqa3 c.37.1.19 (A:546-778) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=99.34 E-value=1.4e-11 Score=116.95 Aligned_cols=144 Identities=17% Similarity=0.216 Sum_probs=102.9
Q ss_pred CCCHHHHHHHHhCCCCCCChhHHHHHHHHHc----C--CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEE
Q 042373 127 GLTTKILETFSKLNHENPVAIQAPASALIIS----G--LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLV 200 (494)
Q Consensus 127 ~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~----g--rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLI 200 (494)
..+....+.+.+.-.-.+|+-|.+++..|.+ + .+.+++|.||||||.+|+..+...+.. |.++++
T Consensus 39 ~~~~~~~~~~~~~lP~~lt~~Q~~~~~~i~~~~~~~~~~~~LL~GdvGsGKT~V~~~a~~~~~~~---------g~qv~~ 109 (233)
T d2eyqa3 39 KHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDN---------HKQVAV 109 (233)
T ss_dssp CCCHHHHHHHHHTCCSCCCHHHHHHHHHHHHHHHSSSCCEEEEECCCCTTTHHHHHHHHHHHHTT---------TCEEEE
T ss_pred CCCHHHHHhhhhccccccchhHHHHHHHHHHHHhccCccCeEEEcCCCCCcHHHHHHHHHHHHHc---------CCceEE
Confidence 3455666665543334799999999988763 3 378999999999999999999988743 779999
Q ss_pred EccchhHHHhh---------------------hhh---hHHHHHHHhcCcc-----------eecccceEEEEEcccchh
Q 042373 201 MAPTGELVRQQ---------------------VRR---GRMIDLLCKNGVK-----------ITNLTRVTYLVLDEADRM 245 (494)
Q Consensus 201 l~PTreLa~Qi---------------------~TP---grl~dll~~~~~~-----------~~~l~~l~~lVlDEaD~m 245 (494)
|+||..|+.|+ .+. ...+.-+..+... .+.++++.+||+||-|+
T Consensus 110 l~Pt~~La~Q~~~~~~~~~~~~~~~v~~l~~~~~~~~~~~~~~~~~~g~~~iviGths~l~~~~~f~~LgLiIiDEeH~- 188 (233)
T d2eyqa3 110 LVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHR- 188 (233)
T ss_dssp ECSSHHHHHHHHHHHHHHSTTTTCCEEEESTTSCHHHHHHHHHHHHTTCCSEEEECTHHHHSCCCCSSEEEEEEESGGG-
T ss_pred EccHHHhHHHHHHHHHHHHhhCCCEEEeccCcccchhHHHHHHHHhCCCCCEEEeehhhhccCCccccccceeeechhh-
Confidence 99999999998 011 1233334433322 13578999999999997
Q ss_pred cccCChhHHHHHHHhhcCCCcEEEecCCCChHHHHHHHh
Q 042373 246 FDMGFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284 (494)
Q Consensus 246 l~~gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~ 284 (494)
.|+. |- ..+.....+..++++|||..++...++..
T Consensus 189 --fg~k-Q~-~~l~~~~~~~~~l~~SATPiprtl~~~~~ 223 (233)
T d2eyqa3 189 --FGVR-HK-ERIKAMRANVDILTLTATPIPRTLNMAMS 223 (233)
T ss_dssp --SCHH-HH-HHHHHHHTTSEEEEEESSCCCHHHHHHHT
T ss_pred --hhhH-HH-HHHHhhCCCCCEEEEecchhHHHHHHHHH
Confidence 3332 22 23344456789999999998887766643
No 31
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.24 E-value=1.6e-11 Score=118.67 Aligned_cols=141 Identities=20% Similarity=0.183 Sum_probs=97.8
Q ss_pred HHHHhCCCCCCChhHHHHHHHHHc----C--CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhH
Q 042373 134 ETFSKLNHENPVAIQAPASALIIS----G--LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL 207 (494)
Q Consensus 134 ~~l~~~g~~~ptpiQ~~aip~il~----g--rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreL 207 (494)
..+..+.| ++|.-|.+|+..|.. + .+.+++|.||||||..|+..++..+.. |-++++++||..|
T Consensus 75 ~f~~~LPF-eLT~~Q~~ai~ei~~d~~~~~~m~rLL~GdvGSGKT~Va~~a~~~~~~~---------g~q~~~m~Pt~~L 144 (264)
T d1gm5a3 75 EFIKSLPF-KLTNAQKRAHQEIRNDMISEKPMNRLLQGDVGSGKTVVAQLAILDNYEA---------GFQTAFMVPTSIL 144 (264)
T ss_dssp HHHHHSSS-CCCHHHHHHHHHHHHHHHSSSCCCCEEECCSSSSHHHHHHHHHHHHHHH---------TSCEEEECSCHHH
T ss_pred HHHhhccc-cCCchHHHHHHHHHHHhhccCcceeeeeccccccccHHHHHHHHHHHhc---------ccceeEEeehHhh
Confidence 34466777 699999999999863 3 478999999999999999999988865 6789999999999
Q ss_pred HHhh---------------------hhh---hHHHHHHHhcCcce-----------ecccceEEEEEcccchhcccCChh
Q 042373 208 VRQQ---------------------VRR---GRMIDLLCKNGVKI-----------TNLTRVTYLVLDEADRMFDMGFEP 252 (494)
Q Consensus 208 a~Qi---------------------~TP---grl~dll~~~~~~~-----------~~l~~l~~lVlDEaD~ml~~gf~~ 252 (494)
|.|. .++ ..++.-+..+.... +.++++.++|+||-|+..-.+.
T Consensus 145 a~Qh~~~~~~~f~~~~~~v~~l~~~~~~~~r~~~~~~~~~g~~~iiIGThsl~~~~~~f~~LglviiDEqH~fgv~Qr-- 222 (264)
T d1gm5a3 145 AIQHYRRTVESFSKFNIHVALLIGATTPSEKEKIKSGLRNGQIDVVIGTHALIQEDVHFKNLGLVIIDEQHRFGVKQR-- 222 (264)
T ss_dssp HHHHHHHHHHHHTCSSCCEEECCSSSCHHHHHHHHHHHHSSCCCEEEECTTHHHHCCCCSCCCEEEEESCCCC-------
T ss_pred hHHHHHHHHHhhhhccccceeeccccchHHHHHHHHHHHCCCCCEEEeehHHhcCCCCccccceeeeccccccchhhH--
Confidence 9998 111 12333333333221 3467999999999998542221
Q ss_pred HHHHHHHhhcCCCcEEEecCCCChHHHHHHHhcCCccc
Q 042373 253 QITRIVQNIRPDRQAVLFSPTFPPRVEILARKTNVCNL 290 (494)
Q Consensus 253 ~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~~g~~~I 290 (494)
..+..-..+..++++|||..++...++. .|..++
T Consensus 223 ---~~l~~~~~~~~~l~~SATPiprtl~~~~-~g~~~~ 256 (264)
T d1gm5a3 223 ---EALMNKGKMVDTLVMSATPIPRSMALAF-YGDLDV 256 (264)
T ss_dssp ---CCCCSSSSCCCEEEEESSCCCHHHHHHH-TCCSSC
T ss_pred ---HHHHHhCcCCCEEEEECCCCHHHHHHHH-cCCCCe
Confidence 1111222467899999998777666553 344443
No 32
>d2p6ra4 c.37.1.19 (A:203-403) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.17 E-value=1e-10 Score=108.53 Aligned_cols=133 Identities=8% Similarity=0.125 Sum_probs=88.9
Q ss_pred CCeEEEEccchhHHHhhhhhhHHHHHHHhcCcceecccceEEEEEcccch-hcccCChhHHHHHHHhhcCCCcEEEecCC
Q 042373 195 SPVGLVMAPTGELVRQQVRRGRMIDLLCKNGVKITNLTRVTYLVLDEADR-MFDMGFEPQITRIVQNIRPDRQAVLFSPT 273 (494)
Q Consensus 195 ~p~aLIl~PTreLa~Qi~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~-ml~~gf~~~i~~Il~~l~~~~Q~ilfSAT 273 (494)
+-.+||.||||..|...+. .|...+.... .. ++... +........-..+...+.. -+.+..+-
T Consensus 40 ~~~~LVF~~sRk~~~~~A~--~L~~~~~~~~----~~--------~~~~~~~~~~~~~~~~~~L~~~l~~--GIa~hh~~ 103 (201)
T d2p6ra4 40 NGGVLVFESTRRGAEKTAV--KLSAITAKYV----EN--------EGLEKAILEENEGEMSRKLAECVRK--GAAFHHAG 103 (201)
T ss_dssp TCCEEEECSSHHHHHHHHH--HHHHHHHTTC----CC--------SSHHHHHHTTCCSHHHHHHHHHHHT--TCCEECTT
T ss_pred CCcEEEEeCCHHHHHHHHH--HHHHHHHhhh----ch--------hHHHHHHHHhhhhhhhHHHHHHHhc--cHHHHHHH
Confidence 3469999999988876532 3444333211 00 11111 1111111222223333322 24566788
Q ss_pred CChHHHHHHHh---cCCccceeeccccccCCCCCCceEEEe-------cCCCCCHhHHHhhhccCCC-----cceEEEEe
Q 042373 274 FPPRVEILARK---TNVCNLSIANSVRARGLDEKELELVIN-------FDAPNDYEDYVHHCCQSWL-----KSCAFRFI 338 (494)
Q Consensus 274 ~~~~v~~l~~~---~g~~~ILVaTdv~~rGlDi~~v~~VIn-------yd~P~s~~~yvhR~GRaGr-----~G~aitfv 338 (494)
+++....++.. .|.++|||||+.+++|||+|.+.+||+ ++.|.+..+|+||+||||| .|.++.++
T Consensus 104 l~~~~r~~ie~~f~~g~i~vlvaT~~l~~Gin~p~~~vvi~~~~~~d~~~~~~~~~~~~q~~GRAGR~g~~~~G~~~l~~ 183 (201)
T d2p6ra4 104 LLNGQRRVVEDAFRRGNIKVVVATPTLAAGVNLPARRVIVRSLYRFDGYSKRIKVSEYKQMAGRAGRPGMDERGEAIIIV 183 (201)
T ss_dssp SCHHHHHHHHHHHHTTSCCEEEECSTTTSSSCCCBSEEEECCSEEESSSEEECCHHHHHHHHTTBSCTTTCSCEEEEEEC
T ss_pred hhhhhHHHHHHHHhCCCceEEEechHHHhhcCCCCceEEEecceeccCCcCCCCHHHHHHHhcccCCCCCCCeeEEEEEe
Confidence 88887766654 899999999999999999999999996 7789999999999999988 45678777
Q ss_pred cccCH
Q 042373 339 SEENA 343 (494)
Q Consensus 339 ~~~~~ 343 (494)
.+.+.
T Consensus 184 ~~~~~ 188 (201)
T d2p6ra4 184 GKRDR 188 (201)
T ss_dssp CGGGH
T ss_pred CCCCh
Confidence 77654
No 33
>d1gm5a4 c.37.1.19 (A:550-755) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.12 E-value=1.1e-11 Score=115.66 Aligned_cols=87 Identities=9% Similarity=0.063 Sum_probs=61.8
Q ss_pred CCCcEEEecCCCChHHHHHHH---hcCCccceeeccccccCCCCCCceEEEecCCCCCHhHHHh-hhcc---CCCcceEE
Q 042373 263 PDRQAVLFSPTFPPRVEILAR---KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVH-HCCQ---SWLKSCAF 335 (494)
Q Consensus 263 ~~~Q~ilfSAT~~~~v~~l~~---~~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~s~~~yvh-R~GR---aGr~G~ai 335 (494)
++..+.++.+-|++.-..-+. .+|+++|||||+++++|||+|++++||+|+.|..-..|+| +.|| +|+.|.||
T Consensus 63 p~~~v~~lHG~m~~~eke~~m~~F~~g~~~iLVaTtViE~GIDip~a~~iii~~a~~fglsqlhQlrGRvGR~~~~~~~~ 142 (206)
T d1gm5a4 63 PEFKLGLMHGRLSQEEKDRVMLEFAEGRYDILVSTTVIEVGIDVPRANVMVIENPERFGLAQLHQLRGRVGRGGQEAYCF 142 (206)
T ss_dssp ---CBCCCCSSSCCSCSHHHHHHHTTTSSSBCCCSSCCCSCSCCTTCCEEEBCSCSSSCTTHHHHHHHTSCCSSTTCEEE
T ss_pred CCCeEEEEeecccHHHHHHHHHHHHCCCEEEEEEehhhhccccccCCcEEEEEccCCccHHHHHhhhhheeeccccceeE
Confidence 445556666666654322222 2999999999999999999999999999999985444544 3455 66689999
Q ss_pred EEecccCHHHHHHH
Q 042373 336 RFISEENAIYATDL 349 (494)
Q Consensus 336 tfv~~~~~~~~~~i 349 (494)
+|+.+.+......+
T Consensus 143 l~~~~~~~~~~~rl 156 (206)
T d1gm5a4 143 LVVGDVGEEAMERL 156 (206)
T ss_dssp CCCCSCCHHHHHHH
T ss_pred eeeccccccchhhh
Confidence 99987665444444
No 34
>d1gkub2 c.37.1.16 (B:251-498) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=98.96 E-value=3e-11 Score=115.47 Aligned_cols=62 Identities=15% Similarity=0.096 Sum_probs=47.8
Q ss_pred cCCccceeec----cccccCCCCCC-ceEEEecCCCCCHhHHHhhhcc---CCCcceEEEEecccCHHHHHHHH
Q 042373 285 TNVCNLSIAN----SVRARGLDEKE-LELVINFDAPNDYEDYVHHCCQ---SWLKSCAFRFISEENAIYATDLV 350 (494)
Q Consensus 285 ~g~~~ILVaT----dv~~rGlDi~~-v~~VInyd~P~s~~~yvhR~GR---aGr~G~aitfv~~~~~~~~~~i~ 350 (494)
.|.++||||| ++++||||+|+ |++|||||+|. |+||+|| +|+.|.+++++...+......+.
T Consensus 67 ~g~~~vLVaT~a~~~v~~rGlDip~~v~~VI~~d~P~----~~~r~gR~~R~g~~~~~~~~~~~~~~~~~~~l~ 136 (248)
T d1gkub2 67 EGEIDHLIGTAHYYGTLVRGLDLPERIRFAVFVGCPS----FRVTIEDIDSLSPQMVKLLAYLYRNVDEIERLL 136 (248)
T ss_dssp HTSCSEEEEECC------CCSCCTTTCCEEEEESCCE----EEEECSCGGGSCHHHHHHHHTTTSCHHHHHTTC
T ss_pred hCCCeEEEEeccccchhhhccCccccccEEEEeCCCc----chhhhhhhhccCcceEeeeeccHhhHHHHHHHH
Confidence 8999999999 89999999996 99999999994 8898888 55577788888877766554433
No 35
>d2fwra1 c.37.1.19 (A:257-456) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=98.79 E-value=3.4e-09 Score=97.38 Aligned_cols=88 Identities=13% Similarity=0.173 Sum_probs=63.1
Q ss_pred ChhHHHHHHHhhcCCCcEEEecCCCChHH-HHHHH--hcCCccceeeccccccCCCCCCceEEEecCCCCCHhHHHhhhc
Q 042373 250 FEPQITRIVQNIRPDRQAVLFSPTFPPRV-EILAR--KTNVCNLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCC 326 (494)
Q Consensus 250 f~~~i~~Il~~l~~~~Q~ilfSAT~~~~v-~~l~~--~~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~s~~~yvhR~G 326 (494)
+...+..|.+.+... .+.+.++..- ..+.. +.|.++|||||+++++|||+|.+++||+|+.|.+...|+||+|
T Consensus 102 ~~~~~~~l~~~l~~~----~i~g~~~~~~R~~~l~~F~~~~~~vLv~~~~~~~Gidl~~~~~vi~~~~~~s~~~~~Q~iG 177 (200)
T d2fwra1 102 HNELVYRISKVFLIP----AITHRTSREEREEILEGFRTGRFRAIVSSQVLDEGIDVPDANVGVIMSGSGSAREYIQRLG 177 (200)
T ss_dssp CHHHHHHHHHHTTCC----BCCSSSCSHHHHTHHHHHHHSSCSBCBCSSCCCSSSCSCCBSEEEEECCSSCCHHHHHHHH
T ss_pred cHHHHHHHHhhcCcc----eeeCCCCHHHHHHHHHHhhcCCeeeeeecchhhcccCCCCCCEEEEeCCCCCHHHHHHHHH
Confidence 445566666666322 2344444432 22221 2789999999999999999999999999999999999999999
Q ss_pred cCCCcc------eEEEEeccc
Q 042373 327 QSWLKS------CAFRFISEE 341 (494)
Q Consensus 327 RaGr~G------~aitfv~~~ 341 (494)
|++|.| ..+.|++.+
T Consensus 178 R~~R~~~~k~~~~i~~~v~~~ 198 (200)
T d2fwra1 178 RILRPSKGKKEAVLYELISRG 198 (200)
T ss_dssp HSBCCCTTTCCEEEEEEEECS
T ss_pred hcCCCCCCCcEEEEEEEecCC
Confidence 976643 456666643
No 36
>d1a1va2 c.37.1.14 (A:326-624) HCV helicase domain {Human hepatitis C virus (HCV), different isolates [TaxId: 11103]}
Probab=98.50 E-value=2.2e-08 Score=97.01 Aligned_cols=70 Identities=7% Similarity=-0.034 Sum_probs=52.6
Q ss_pred cCCccceeecccccc---CCCCCCceEEEecCCCCCHhHHHhhhccCCC--cceEEEEec---ccCHHHHHHHHHHHH
Q 042373 285 TNVCNLSIANSVRAR---GLDEKELELVINFDAPNDYEDYVHHCCQSWL--KSCAFRFIS---EENAIYATDLVKAFE 354 (494)
Q Consensus 285 ~g~~~ILVaTdv~~r---GlDi~~v~~VInyd~P~s~~~yvhR~GRaGr--~G~aitfv~---~~~~~~~~~i~~~l~ 354 (494)
.|+.++||+|+++++ |+|++.|.+|||||+|.|.++|+||+||+|| .|....++. +...-..-.|.+..+
T Consensus 94 ~G~~dvVVaT~~~a~g~~giDid~V~~VI~~d~P~SvesyIQRiGRTGRGr~G~~~~l~~~t~p~~~l~s~al~~~~~ 171 (299)
T d1a1va2 94 TGDFDSVIDCNTCVTQTVDFSLDPTFTIETTTLPQDAVSRTQRRGRTGRGKPGIYRFVAPGERPSGMFDSSVLCECYD 171 (299)
T ss_dssp CCCBSEEEECCEEEEEEEECCCSSSCEEEEEEEECBHHHHHHHHTTBCSSSCEEEEESCSCCBCSCBCCHHHHHHHHH
T ss_pred cCCCcEEEEEeehhccCCCCCCCcceEEEeCCCCCCHHHHHhhccccCCCCCceEEEEecCCCHHHHHHHHHHHHHHH
Confidence 789999999999998 6788888899999999999999999999887 454433332 223333334444444
No 37
>d2eyqa5 c.37.1.19 (A:779-989) Transcription-repair coupling factor, TRCF {Escherichia coli [TaxId: 562]}
Probab=98.45 E-value=6.7e-07 Score=82.57 Aligned_cols=84 Identities=11% Similarity=0.124 Sum_probs=65.3
Q ss_pred HHhhcCCCcEEEecCCCChHHHHHHHh---cCCccceeeccccccCCCCCCceEEEecCCCC-CHhHHHh---hhccCCC
Q 042373 258 VQNIRPDRQAVLFSPTFPPRVEILARK---TNVCNLSIANSVRARGLDEKELELVINFDAPN-DYEDYVH---HCCQSWL 330 (494)
Q Consensus 258 l~~l~~~~Q~ilfSAT~~~~v~~l~~~---~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P~-s~~~yvh---R~GRaGr 330 (494)
+..+-++..+.++...|++.-..-... .|+++|||||.+.+.|||||+++++|.++... -+.++-| |+||.++
T Consensus 51 l~~~~p~~~i~~lHGkm~~~eke~im~~F~~g~~~ILv~TtvIEvGiDvpnA~~iiI~~a~rfGLaQLhQLRGRVGR~~~ 130 (211)
T d2eyqa5 51 LAELVPEARIAIGHGQMRERELERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHH 130 (211)
T ss_dssp HHHHCTTSCEEECCSSCCHHHHHHHHHHHHTTSCCEEEESSTTGGGSCCTTEEEEEETTTTSSCHHHHHHHHTTCCBTTB
T ss_pred HHHhCCceEEEEEEeccCHHHHHHHHHHHHcCCcceEEEehhhhhccCCCCCcEEEEecchhccccccccccceeeecCc
Confidence 333446778888899998765443322 99999999999999999999999999999987 4555555 6666777
Q ss_pred cceEEEEeccc
Q 042373 331 KSCAFRFISEE 341 (494)
Q Consensus 331 ~G~aitfv~~~ 341 (494)
.|.||.++...
T Consensus 131 ~s~c~l~~~~~ 141 (211)
T d2eyqa5 131 QAYAWLLTPHP 141 (211)
T ss_dssp CEEEEEEECCG
T ss_pred cceEEEEecCC
Confidence 89999888653
No 38
>d1z3ix2 c.37.1.19 (X:92-389) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=98.05 E-value=1.5e-05 Score=76.90 Aligned_cols=127 Identities=19% Similarity=0.300 Sum_probs=73.5
Q ss_pred CCChhHHHHHHHHH---------cCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh--
Q 042373 143 NPVAIQAPASALII---------SGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ-- 211 (494)
Q Consensus 143 ~ptpiQ~~aip~il---------~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi-- 211 (494)
.+.|+|.+++.-+. .+..+|+.-..|.|||+..+. ++..+..+..... .....+|||||.. |..|.
T Consensus 55 ~Lr~hQ~~gv~~l~~~~~~~~~~~~~g~iLaDemGlGKT~qaia-~l~~l~~~~~~~~-~~~~~~LIV~P~s-l~~qW~~ 131 (298)
T d1z3ix2 55 VLRPHQREGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCIT-LIWTLLKQSPDCK-PEIDKVIVVSPSS-LVRNWYN 131 (298)
T ss_dssp TCCHHHHHHHHHHHHHHTTSSSTTCCEEEECCCTTSCHHHHHHH-HHHHHHHCCTTSS-CSCSCEEEEECHH-HHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHhhhhccCCceEEEeCCCCCHHHHHHH-HHHHHHHhccccc-CCCCcEEEEccch-hhHHHHH
Confidence 57899999987553 345688888999999986443 4444444322111 1134699999985 66665
Q ss_pred ----hhh-------------h----HHHHHHHhcCc------------------ceecccceEEEEEcccchhcccCChh
Q 042373 212 ----VRR-------------G----RMIDLLCKNGV------------------KITNLTRVTYLVLDEADRMFDMGFEP 252 (494)
Q Consensus 212 ----~TP-------------g----rl~dll~~~~~------------------~~~~l~~l~~lVlDEaD~ml~~gf~~ 252 (494)
.++ . .+...+..... ....-.+..+||+||+|++-..+ .
T Consensus 132 Ei~k~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~sy~~~~~~~~~l~~~~~~~vI~DEaH~ikn~~--s 209 (298)
T d1z3ix2 132 EVGKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNSD--N 209 (298)
T ss_dssp HHHHHHGGGCCEEEECSSCHHHHHHHHHHHHCCCSSCCSCCEEEEEHHHHHHHTTTTTTSCCCEEEETTGGGCCTTC--H
T ss_pred HHHhhcCCceeEEEEeCchHHHHHHHHHHhhhccCccccceEEEEeecccccchhcccccceeeeeccccccccccc--c
Confidence 111 0 11111111110 00112246789999999987543 3
Q ss_pred HHHHHHHhhcCCCcEEEecCCCC
Q 042373 253 QITRIVQNIRPDRQAVLFSPTFP 275 (494)
Q Consensus 253 ~i~~Il~~l~~~~Q~ilfSAT~~ 275 (494)
+....+..+. ....+++|||.-
T Consensus 210 ~~~~a~~~l~-~~~rllLTGTPi 231 (298)
T d1z3ix2 210 QTYLALNSMN-AQRRVLISGTPI 231 (298)
T ss_dssp HHHHHHHHHC-CSEEEEECSSCS
T ss_pred hhhhhhhccc-cceeeeecchHH
Confidence 3444445553 455688899963
No 39
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=97.79 E-value=2.7e-05 Score=77.49 Aligned_cols=120 Identities=19% Similarity=0.246 Sum_probs=77.5
Q ss_pred CCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhhh----------
Q 042373 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQV---------- 212 (494)
Q Consensus 143 ~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi~---------- 212 (494)
..+..|.+|+..++.++-+++.++.|||||... .-++..+.... ...+.++++++||..-|..+.
T Consensus 148 ~~~~~Q~~A~~~al~~~~~vI~G~pGTGKTt~i-~~~l~~l~~~~----~~~~~~I~l~ApTgkAA~~L~e~~~~~~~~~ 222 (359)
T d1w36d1 148 DEINWQKVAAAVALTRRISVISGGPGTGKTTTV-AKLLAALIQMA----DGERCRIRLAAPTGKAAARLTESLGKALRQL 222 (359)
T ss_dssp TSCCHHHHHHHHHHTBSEEEEECCTTSTHHHHH-HHHHHHHHHTC----SSCCCCEEEEBSSHHHHHHHHHHHTHHHHHS
T ss_pred ccccHHHHHHHHHHcCCeEEEEcCCCCCceehH-HHHHHHHHHHH----hccCCeEEEecCcHHHHHHHHHHHHHHHhhc
Confidence 457789999999999999999999999999763 23334443321 112668999999987776651
Q ss_pred ---------------hhhHHHHHHHhcC---cceecccceEEEEEcccchhcccCChhHHHHHHHhhcCCCcEEEec
Q 042373 213 ---------------RRGRMIDLLCKNG---VKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271 (494)
Q Consensus 213 ---------------TPgrl~dll~~~~---~~~~~l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfS 271 (494)
|..++........ ....+...+++||+|||-.+- .+.+..++..++...++|++.
T Consensus 223 ~~~~~~~~~~~~~~~t~~~ll~~~~~~~~~~~~~~~~l~~d~lIIDEaSmv~----~~l~~~ll~~~~~~~~lILvG 295 (359)
T d1w36d1 223 PLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMID----LPMMSRLIDALPDHARVIFLG 295 (359)
T ss_dssp SCCSCCCCSCSCCCBTTTSCC-----------CTTSCCSCSEEEECSGGGCB----HHHHHHHHHTCCTTCEEEEEE
T ss_pred CchhhhhhhhhhhhhHHHHHHhhhhcchHHHHhhhcccccceeeehhhhccC----HHHHHHHHHHhcCCCEEEEEC
Confidence 1111111110000 001123457899999998543 456778888888888888764
No 40
>d1z63a1 c.37.1.19 (A:432-661) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.75 E-value=5.6e-05 Score=69.71 Aligned_cols=115 Identities=17% Similarity=0.249 Sum_probs=69.0
Q ss_pred CCChhHHHHHHHHH----cCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh-------
Q 042373 143 NPVAIQAPASALII----SGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ------- 211 (494)
Q Consensus 143 ~ptpiQ~~aip~il----~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi------- 211 (494)
++.|+|.+++.-+. .+..+|+.-.+|.|||+..+. ++.++....+ ...+||+||.. +..|.
T Consensus 12 ~L~~yQ~~~v~~~~~~~~~~~g~iLaDe~GlGKT~~~i~-~~~~~~~~~~------~~~~LIv~p~~-l~~~W~~e~~~~ 83 (230)
T d1z63a1 12 NLRPYQIKGFSWMRFMNKLGFGICLADDMGLGKTLQTIA-VFSDAKKENE------LTPSLVICPLS-VLKNWEEELSKF 83 (230)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCCEEECCCTTSCHHHHHHH-HHHHHHHTTC------CSSEEEEECST-THHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhhhcCCCEEEEeCCCCChHHHHHH-hhhhhhhccc------ccccceecchh-hhhHHHHHHHhh
Confidence 57899999986543 356789999999999998654 4455544321 34689999953 44443
Q ss_pred -------------------------hhhhHHHHHHHhcCcceecccceEEEEEcccchhcccCChhHHHHHHHhhcCCCc
Q 042373 212 -------------------------VRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQ 266 (494)
Q Consensus 212 -------------------------~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q 266 (494)
.+... +... ..+.--...+||+||+|++-... ......+..+. ...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~vvi~~~~~----~~~~--~~l~~~~~~~vI~DEah~~k~~~--s~~~~~~~~l~-a~~ 154 (230)
T d1z63a1 84 APHLRFAVFHEDRSKIKLEDYDIILTTYAV----LLRD--TRLKEVEWKYIVIDEAQNIKNPQ--TKIFKAVKELK-SKY 154 (230)
T ss_dssp CTTSCEEECSSSTTSCCGGGSSEEEEEHHH----HTTC--HHHHTCCEEEEEEETGGGGSCTT--SHHHHHHHTSC-EEE
T ss_pred cccccceeeccccchhhccCcCEEEeeHHH----HHhH--HHHhcccceEEEEEhhhcccccc--hhhhhhhhhhc-cce
Confidence 01111 1100 00011256789999999987543 23333344443 334
Q ss_pred EEEecCCC
Q 042373 267 AVLFSPTF 274 (494)
Q Consensus 267 ~ilfSAT~ 274 (494)
.+++|+|.
T Consensus 155 r~~LTgTP 162 (230)
T d1z63a1 155 RIALTGTP 162 (230)
T ss_dssp EEEECSSC
T ss_pred EEEEecch
Confidence 67889985
No 41
>d1yksa2 c.37.1.14 (A:325-623) YFV helicase domain {Yellow fever virus [TaxId: 11089]}
Probab=97.73 E-value=2.7e-05 Score=75.53 Aligned_cols=69 Identities=14% Similarity=0.101 Sum_probs=45.5
Q ss_pred EEecCCCChHHHHHHHhcCCccceeeccccccCCCCCCceEEEecCCC-------------------CCHhHHHhhhccC
Q 042373 268 VLFSPTFPPRVEILARKTNVCNLSIANSVRARGLDEKELELVINFDAP-------------------NDYEDYVHHCCQS 328 (494)
Q Consensus 268 ilfSAT~~~~v~~l~~~~g~~~ILVaTdv~~rGlDi~~v~~VInyd~P-------------------~s~~~yvhR~GRa 328 (494)
++-+.|...+...+ +.+..+|||||+++++||++ +|.+||++.++ -+..+-.||.||+
T Consensus 65 ~l~~~~~~~e~~~~--~~~~~~~~~~t~~~~~~~~~-~~~~vid~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~qr~gr~ 141 (299)
T d1yksa2 65 VLNRKTFEREYPTI--KQKKPDFILATDIAEMGANL-CVERVLDCRTAFKPVLVDEGRKVAIKGPLRISASSAAQRRGRI 141 (299)
T ss_dssp ECCSSSCC----------CCCSEEEESSSTTCCTTC-CCSEEEECCEEEEEEEETTTTEEEEEEEEECCHHHHHHHHTTS
T ss_pred EEcCcCcHhHHhhh--hcCCcCEEEEechhhhceec-CceEEEecCceeceeeecCCCCeeEEeeeecCHHHHHHhcccc
Confidence 34445555554443 37889999999999999999 69999976642 3566778999999
Q ss_pred CCcc---eEEEEec
Q 042373 329 WLKS---CAFRFIS 339 (494)
Q Consensus 329 Gr~G---~aitfv~ 339 (494)
||.+ .++.++.
T Consensus 142 gr~~~~~~~~~~y~ 155 (299)
T d1yksa2 142 GRNPNRDGDSYYYS 155 (299)
T ss_dssp SCCTTCCCEEEEEC
T ss_pred cccCCCceEEEEeC
Confidence 9843 2444544
No 42
>d1z3ix1 c.37.1.19 (X:390-735) Rad54-like, Rad54L {Zebra fish (Danio rerio) [TaxId: 7955]}
Probab=97.29 E-value=0.0012 Score=64.79 Aligned_cols=77 Identities=12% Similarity=0.166 Sum_probs=55.7
Q ss_pred CcEEEecCCCChHH-HHHHHh--cC--Cc-cceeeccccccCCCCCCceEEEecCCCCCHhHHHhhhccCCCcc-----e
Q 042373 265 RQAVLFSPTFPPRV-EILARK--TN--VC-NLSIANSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS-----C 333 (494)
Q Consensus 265 ~Q~ilfSAT~~~~v-~~l~~~--~g--~~-~ILVaTdv~~rGlDi~~v~~VInyd~P~s~~~yvhR~GRaGr~G-----~ 333 (494)
...+.+..+.+..- ..+... .+ .. -+|++|.+.+.|||+..+++||+||++.++..+.|++||+.|-| .
T Consensus 143 ~~~~~l~G~~~~~~R~~~i~~F~~~~~~~~vlLls~~agg~GlnL~~a~~vi~~d~~wnp~~~~Qa~~R~~R~GQ~~~V~ 222 (346)
T d1z3ix1 143 YLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCY 222 (346)
T ss_dssp CCEEEECSSCCHHHHHHHHHHHHSTTCCCCEEEEEGGGSCTTCCCTTEEEEEECSCCSSHHHHHHHHTTSSSTTCCSCEE
T ss_pred ccccccccchhHHHHHHHHHhhhcccccceeeeecchhhhhccccccceEEEEecCCCccchHhHhhhcccccCCCCceE
Confidence 34555666666432 222222 22 22 36778889999999999999999999999999999999965544 4
Q ss_pred EEEEeccc
Q 042373 334 AFRFISEE 341 (494)
Q Consensus 334 aitfv~~~ 341 (494)
.|.|+...
T Consensus 223 v~rli~~~ 230 (346)
T d1z3ix1 223 IYRLLSTG 230 (346)
T ss_dssp EEEEEETT
T ss_pred EEEEEeCC
Confidence 67777765
No 43
>d1z5za1 c.37.1.19 (A:663-906) Helicase of the SNF2/Rad54 hamily {Sulfolobus solfataricus [TaxId: 2287]}
Probab=97.16 E-value=0.00046 Score=64.09 Aligned_cols=75 Identities=11% Similarity=0.053 Sum_probs=45.2
Q ss_pred EEEecCCCChHHH-HHHHh---cCCccceee-ccccccCCCCCCceEEEecCCCCCHhHHHhhhccCCCcc-----eEEE
Q 042373 267 AVLFSPTFPPRVE-ILARK---TNVCNLSIA-NSVRARGLDEKELELVINFDAPNDYEDYVHHCCQSWLKS-----CAFR 336 (494)
Q Consensus 267 ~ilfSAT~~~~v~-~l~~~---~g~~~ILVa-Tdv~~rGlDi~~v~~VInyd~P~s~~~yvhR~GRaGr~G-----~ait 336 (494)
+..+..+.+..-. ..... .....+||+ |...+.|||+..+++||+||+|.++..+.|++||..|-| ..+.
T Consensus 113 ~~~i~G~~~~~~R~~~i~~F~~~~~~~vll~~~~~~g~Glnl~~a~~vi~~~~~wn~~~~~Qa~~R~~R~Gq~~~v~i~~ 192 (244)
T d1z5za1 113 VPFLYGELSKKERDDIISKFQNNPSVKFIVLSVKAGGFGINLTSANRVIHFDRWWNPAVEDQATDRVYRIGQTRNVIVHK 192 (244)
T ss_dssp CCEECTTSCHHHHHHHHHHHHHCTTCCEEEEECCTTCCCCCCTTCSEEEECSCCSCTTTC--------------CCEEEE
T ss_pred EEEEecccchhccchhhhhhhccccchhccccccccccccccchhhhhhhcCchhhhHHHhhhcceeeecCCCCceEEEE
Confidence 3444555555432 22222 445566655 578899999999999999999999999999999955544 4667
Q ss_pred Eeccc
Q 042373 337 FISEE 341 (494)
Q Consensus 337 fv~~~ 341 (494)
|+..+
T Consensus 193 l~~~~ 197 (244)
T d1z5za1 193 LISVG 197 (244)
T ss_dssp EEETT
T ss_pred EeeCC
Confidence 77766
No 44
>d1tf5a4 c.37.1.19 (A:396-570) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=96.73 E-value=0.0021 Score=56.80 Aligned_cols=57 Identities=18% Similarity=0.074 Sum_probs=44.3
Q ss_pred CCccceeeccccccCCCCC--------CceEEEecCCCCCHhHHHhhhccCCC---cceEEEEecccC
Q 042373 286 NVCNLSIANSVRARGLDEK--------ELELVINFDAPNDYEDYVHHCCQSWL---KSCAFRFISEEN 342 (494)
Q Consensus 286 g~~~ILVaTdv~~rGlDi~--------~v~~VInyd~P~s~~~yvhR~GRaGr---~G~aitfv~~~~ 342 (494)
..-.|.|||+.+.||.||. +-=|||.-..|.+.....|-.||+|| .|.+..|++-+|
T Consensus 81 ~~g~VtIATNmAGRGtDikl~~~v~~~GGLhVI~t~~~~s~Rid~Ql~GR~gRQGdpGs~~~~~sleD 148 (175)
T d1tf5a4 81 QKGAVTIATNMAGRGTDIKLGEGVKELGGLAVVGTERHESRRIDNQLRGRSGRQGDPGITQFYLSMED 148 (175)
T ss_dssp STTCEEEEETTSSTTCCCCCCTTSGGGTSEEEEESSCCSSHHHHHHHHTTSSGGGCCEEEEEEEETTS
T ss_pred CCCceeehhhHHHcCCCccchHHHHhCCCcEEEEeccCcchhHHHHHhcchhhhCCCcccEEEEEcCH
Confidence 3446999999999999974 22368888899999988887777665 677888886554
No 45
>d1tf5a3 c.37.1.19 (A:1-226,A:349-395) Translocation ATPase SecA, nucleotide-binding domains {Bacillus subtilis [TaxId: 1423]}
Probab=96.64 E-value=0.0033 Score=59.09 Aligned_cols=96 Identities=22% Similarity=0.263 Sum_probs=69.1
Q ss_pred CCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh-------
Q 042373 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ------- 211 (494)
Q Consensus 139 ~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi------- 211 (494)
+|. .|++.|...--.+..|+ |+...||=|||++..+|+.-..+. |..+=|++..--||..=
T Consensus 77 lG~-RhyDVQLiGgi~L~~G~--iaem~TGEGKTL~a~l~a~l~al~---------g~~vhvvTvNdyLA~RDae~m~~i 144 (273)
T d1tf5a3 77 TGM-FPFKVQLMGGVALHDGN--IAEMKTGEGKTLTSTLPVYLNALT---------GKGVHVVTVNEYLASRDAEQMGKI 144 (273)
T ss_dssp HSC-CCCHHHHHHHHHHHTTS--EEECCTTSCHHHHHHHHHHHHHTT---------SSCEEEEESSHHHHHHHHHHHHHH
T ss_pred hce-EEehhHHHHHHHHHhhh--heeecCCCcchhHHHHHHHHHHhc---------CCCceEEecCccccchhhhHHhHH
Confidence 555 78999998888888885 889999999999999999877654 45577788887787542
Q ss_pred ------------------------------hhhhHH-HHHHHhcC---cceecccceEEEEEcccchhc
Q 042373 212 ------------------------------VRRGRM-IDLLCKNG---VKITNLTRVTYLVLDEADRMF 246 (494)
Q Consensus 212 ------------------------------~TPgrl-~dll~~~~---~~~~~l~~l~~lVlDEaD~ml 246 (494)
+|...+ .|+|..+- ......+.+.+.|+||+|.|+
T Consensus 145 y~~lGlsvg~~~~~~~~~~r~~~Y~~di~Ygt~~e~~fDyLrd~~~~~~~~~~~r~~~~aIvDEvDsil 213 (273)
T d1tf5a3 145 FEFLGLTVGLNLNSMSKDEKREAYAADITYSTNNELGFDYLRDNMVLYKEQMVQRPLHFAVIDEVDSIL 213 (273)
T ss_dssp HHHTTCCEEECCTTSCHHHHHHHHHSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEEETHHHHH
T ss_pred HHHcCCCccccccccCHHHHHHHhhCCceecchhhhhhhhcchhhhcChhhhccCCCCEEEEEcchhhh
Confidence 233322 24444321 112235678999999999977
No 46
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia coli, RepD [TaxId: 562]}
Probab=96.45 E-value=0.0011 Score=62.28 Aligned_cols=62 Identities=16% Similarity=0.041 Sum_probs=43.9
Q ss_pred CCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh
Q 042373 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ 211 (494)
Q Consensus 143 ~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi 211 (494)
+++|-|.+++-. ....+++.|+.|||||.+.+.-+...+.... . ...++||+++|+.+|..+
T Consensus 1 ~L~~eQ~~av~~--~~~~~lI~g~aGTGKTt~l~~rv~~ll~~~~-~----~~~~ILvlt~tn~a~~~i 62 (306)
T d1uaaa1 1 RLNPGQQQAVEF--VTGPCLVLAGAGSGKTRVITNKIAHLIRGCG-Y----QARHIAAVTFTNKAAREM 62 (306)
T ss_dssp CCCHHHHHHHHC--CSSEEEECCCTTSCHHHHHHHHHHHHHHHHC-C----CGGGEEEEESSHHHHHHH
T ss_pred CcCHHHHHHHhC--CCCCEEEEeeCCccHHHHHHHHHHHHHHhcC-C----ChhHEEEEeCcHHHHHHH
Confidence 478999999954 3456999999999999875544433332211 1 123699999999999875
No 47
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=96.17 E-value=0.0044 Score=56.26 Aligned_cols=85 Identities=14% Similarity=0.172 Sum_probs=47.3
Q ss_pred CEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhhh---hhhHHHHHHHhcCcceecccceEE
Q 042373 160 DSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQV---RRGRMIDLLCKNGVKITNLTRVTY 236 (494)
Q Consensus 160 dvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi~---TPgrl~dll~~~~~~~~~l~~l~~ 236 (494)
.++++|++|+|||-. +..+.+.+... +..++++ +...+..+.. ..+.+.++.. .+..+++
T Consensus 38 ~l~l~G~~G~GKTHL-l~A~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~dl 100 (213)
T d1l8qa2 38 PIFIYGSVGTGKTHL-LQAAGNEAKKR--------GYRVIYS-SADDFAQAMVEHLKKGTINEFRN-------MYKSVDL 100 (213)
T ss_dssp SEEEECSSSSSHHHH-HHHHHHHHHHT--------TCCEEEE-EHHHHHHHHHHHHHHTCHHHHHH-------HHHTCSE
T ss_pred cEEEECCCCCcHHHH-HHHHHHHhccC--------ccceEEe-chHHHHHHHHHHHHccchhhHHH-------HHhhccc
Confidence 489999999999952 22344444432 3444444 4545444331 1111112221 2557889
Q ss_pred EEEcccchhcccC-ChhHHHHHHHhh
Q 042373 237 LVLDEADRMFDMG-FEPQITRIVQNI 261 (494)
Q Consensus 237 lVlDEaD~ml~~g-f~~~i~~Il~~l 261 (494)
|++|++|.+.... ....+..++..+
T Consensus 101 l~iDDi~~i~~~~~~~~~lf~lin~~ 126 (213)
T d1l8qa2 101 LLLDDVQFLSGKERTQIEFFHIFNTL 126 (213)
T ss_dssp EEEECGGGGTTCHHHHHHHHHHHHHH
T ss_pred hhhhhhhhhcCchHHHHHHHHHHHHH
Confidence 9999999987432 233455555554
No 48
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=95.92 E-value=0.022 Score=52.73 Aligned_cols=108 Identities=14% Similarity=0.075 Sum_probs=56.0
Q ss_pred CCCCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHH--HcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCC
Q 042373 119 PIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALI--ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSP 196 (494)
Q Consensus 119 pi~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~i--l~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p 196 (494)
|=.+|++++-.+.+.+.|++. . .+ ..+.+.+..+ -..+.+|+.||+|+|||+.. -.+.+-. +-
T Consensus 4 p~~~~~di~G~~~~k~~l~~~-i-~~-l~~~~~~~~~g~~~~~giLl~GppGtGKT~la--~aia~~~----------~~ 68 (247)
T d1ixza_ 4 PKVTFKDVAGAEEAKEELKEI-V-EF-LKNPSRFHEMGARIPKGVLLVGPPGVGKTHLA--RAVAGEA----------RV 68 (247)
T ss_dssp CSCCGGGCCSCHHHHHHHHHH-H-HH-HHCHHHHHHTTCCCCSEEEEECCTTSSHHHHH--HHHHHHT----------TC
T ss_pred CCCcHHHHccHHHHHHHHHHH-H-HH-HHCHHHHHHcCCCCCceEEEecCCCCChhHHH--HHHHHHc----------CC
Confidence 336899997777766666431 0 00 0001111111 01256999999999999732 2222211 33
Q ss_pred eEEEEccchhHHHh-h-hhhhHHHHHHHhcCcceecccceEEEEEcccchhcc
Q 042373 197 VGLVMAPTGELVRQ-Q-VRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFD 247 (494)
Q Consensus 197 ~aLIl~PTreLa~Q-i-~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~ 247 (494)
..+.+.++ .|... + .|..++..++..-. -..=.+|++||+|.++.
T Consensus 69 ~~~~i~~~-~l~~~~~g~~~~~l~~~f~~a~-----~~~p~Ii~iDeid~l~~ 115 (247)
T d1ixza_ 69 PFITASGS-DFVEMFVGVGAARVRDLFETAK-----RHAPCIVFIDEIDAVGR 115 (247)
T ss_dssp CEEEEEHH-HHHHSCTTHHHHHHHHHHHHHT-----TSSSEEEEEETHHHHHC
T ss_pred CEEEEEhH-HhhhccccHHHHHHHHHHHHHH-----HcCCEEEEEEChhhhCc
Confidence 44555444 33332 2 24445555554321 11224899999999874
No 49
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.76 E-value=0.013 Score=52.58 Aligned_cols=47 Identities=21% Similarity=0.299 Sum_probs=30.6
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCC--CEEEEcCCCCCchhhhHHHHHHHH
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGL--DSVAITETGSGKTLAFLLPMLRHI 183 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~gr--dvi~~a~TGSGKTlafllpil~~l 183 (494)
++|+++-.++.+++.|+.. +.+++ ++|++||+|+|||....+ +++.+
T Consensus 11 ~~~~divg~~~~~~~L~~~---------------i~~~~~~~lLl~Gp~G~GKttl~~~-la~~l 59 (227)
T d1sxjc2 11 ETLDEVYGQNEVITTVRKF---------------VDEGKLPHLLFYGPPGTGKTSTIVA-LAREI 59 (227)
T ss_dssp SSGGGCCSCHHHHHHHHHH---------------HHTTCCCCEEEECSSSSSHHHHHHH-HHHHH
T ss_pred CCHHHccCcHHHHHHHHHH---------------HHcCCCCeEEEECCCCCChhHHHHH-HHHHh
Confidence 5677777777777777542 12222 589999999999954332 34444
No 50
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.58 E-value=0.0082 Score=54.58 Aligned_cols=50 Identities=16% Similarity=0.255 Sum_probs=33.7
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHH
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHI 183 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l 183 (494)
++|+++-.++.+.+.|+.+ +... .....+++.||.|+|||... ..+.+.+
T Consensus 8 ~~~~diig~~~~~~~L~~~-~~~~-----------~~~~~lll~Gp~G~GKTt~~-~~la~~l 57 (252)
T d1sxje2 8 KSLNALSHNEELTNFLKSL-SDQP-----------RDLPHLLLYGPNGTGKKTRC-MALLESI 57 (252)
T ss_dssp CSGGGCCSCHHHHHHHHTT-TTCT-----------TCCCCEEEECSTTSSHHHHH-HTHHHHH
T ss_pred CCHHHccCcHHHHHHHHHH-HHcC-----------CCCCeEEEECCCCCCHHHHH-HHHHHhh
Confidence 4688888899999988764 2111 01235999999999999644 3445554
No 51
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=95.45 E-value=0.01 Score=55.97 Aligned_cols=62 Identities=19% Similarity=0.077 Sum_probs=45.5
Q ss_pred CCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh
Q 042373 143 NPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ 211 (494)
Q Consensus 143 ~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi 211 (494)
.+++-|.+++-. .+..++|.|+.|||||.+.+--+...+... ... .-++|++++|+.++..+
T Consensus 11 ~L~~eQ~~~v~~--~~g~~lV~g~aGSGKTt~l~~ri~~ll~~~-~~~----p~~il~lt~t~~aa~~~ 72 (318)
T d1pjra1 11 HLNKEQQEAVRT--TEGPLLIMAGAGSGKTRVLTHRIAYLMAEK-HVA----PWNILAITFTNKAAREM 72 (318)
T ss_dssp TSCHHHHHHHHC--CSSCEEEEECTTSCHHHHHHHHHHHHHHTT-CCC----GGGEEEEESSHHHHHHH
T ss_pred hCCHHHHHHHhC--CCCCEEEEecCCccHHHHHHHHHHHHHHcC-CCC----HHHeEeEeccHHHHHHH
Confidence 478999999874 355799999999999987655554444332 111 23699999999999876
No 52
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=95.42 E-value=0.014 Score=52.45 Aligned_cols=121 Identities=12% Similarity=0.099 Sum_probs=58.8
Q ss_pred CChhHHHHHHHHH----cCC---CEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCC-------------CCCCeEEEEcc
Q 042373 144 PVAIQAPASALII----SGL---DSVAITETGSGKTLAFLLPMLRHIWEQPPVVPG-------------DDSPVGLVMAP 203 (494)
Q Consensus 144 ptpiQ~~aip~il----~gr---dvi~~a~TGSGKTlafllpil~~l~~~~~~~~~-------------~~~p~aLIl~P 203 (494)
.+|+|..++..+. +++ -+|++||.|+|||.... -+...++........ ...+...++.+
T Consensus 3 ~yPw~~~~~~~l~~~~~~~~l~h~lLl~Gp~G~GKtt~a~-~~a~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 81 (207)
T d1a5ta2 3 WYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIY-ALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAP 81 (207)
T ss_dssp CCGGGHHHHHHHHHHHHTTCCCSEEEEECCTTSCHHHHHH-HHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECC
T ss_pred CCcccHHHHHHHHHHHHcCCcCeEEEEECCCCCcHHHHHH-HHHHhcccccccccccccccchhhhhhhccccccchhhh
Confidence 3578877776553 443 48999999999997443 344555432211100 01334455544
Q ss_pred chhHHHhhhhhhHHHHHHHhcCcceecccceEEEEEcccchhcccCChhHHHHHHHhhcCCCcEEE
Q 042373 204 TGELVRQQVRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVL 269 (494)
Q Consensus 204 TreLa~Qi~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~il 269 (494)
...--. ..-..+..+...-. ........+++|+||+|.|.... ...+.++++.-+....+++
T Consensus 82 ~~~~~~--i~~~~ir~l~~~~~-~~~~~~~~kviIide~d~l~~~a-~n~Llk~lEep~~~~~fIl 143 (207)
T d1a5ta2 82 EKGKNT--LGVDAVREVTEKLN-EHARLGGAKVVWVTDAALLTDAA-ANALLKTLEEPPAETWFFL 143 (207)
T ss_dssp CTTCSS--BCHHHHHHHHHHTT-SCCTTSSCEEEEESCGGGBCHHH-HHHHHHHHTSCCTTEEEEE
T ss_pred hhcccc--cccchhhHHhhhhh-hccccCccceEEechhhhhhhhh-hHHHHHHHHhhcccceeee
Confidence 321100 00011222222211 11124567899999999987432 2334444444333333333
No 53
>d1nkta3 c.37.1.19 (A:-15-225,A:350-396) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=95.40 E-value=0.02 Score=53.95 Aligned_cols=96 Identities=24% Similarity=0.330 Sum_probs=66.0
Q ss_pred CCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh-------
Q 042373 139 LNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ------- 211 (494)
Q Consensus 139 ~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi------- 211 (494)
+|. .|.+.|...--.+..| -|+...||=|||++..+|+.-..+. |..+-|++..--||..=
T Consensus 94 lGm-RhyDVQLiGgi~l~~g--~iaem~TGEGKTL~a~l~a~l~al~---------g~~vhvvTvNdyLA~RDa~~m~~~ 161 (288)
T d1nkta3 94 LDQ-RPFDVQVMGAAALHLG--NVAEMKTGEGKTLTCVLPAYLNALA---------GNGVHIVTVNDYLAKRDSEWMGRV 161 (288)
T ss_dssp HSC-CCCHHHHHHHHHHHTT--EEEECCTTSCHHHHTHHHHHHHHTT---------TSCEEEEESSHHHHHHHHHHHHHH
T ss_pred ccc-eeeeehhHHHHHHhhh--hhhcccCCCchhHHHHHHHHHHHhc---------CCCeEEEecCchhhhhhHHHHHHH
Confidence 444 6888888776555554 5889999999999999999877765 55677888888887642
Q ss_pred ------------------------------hhhhHH-HHHHHhcC---cceecccceEEEEEcccchhc
Q 042373 212 ------------------------------VRRGRM-IDLLCKNG---VKITNLTRVTYLVLDEADRMF 246 (494)
Q Consensus 212 ------------------------------~TPgrl-~dll~~~~---~~~~~l~~l~~lVlDEaD~ml 246 (494)
+|...+ .|+|..+- ......+.+.+.|+||+|.|+
T Consensus 162 y~~lGlsvg~~~~~~~~~~~~~~Y~~di~Y~t~~e~gfDyLrd~~~~~~~~~~~r~~~~aIvDEvDsiL 230 (288)
T d1nkta3 162 HRFLGLQVGVILATMTPDERRVAYNADITYGTNNEFGFDYLRDNMAHSLDDLVQRGHHYAIVDEVDSIL 230 (288)
T ss_dssp HHHTTCCEEECCTTCCHHHHHHHHHSSEEEEEHHHHHHHHHHHTTCSSGGGCCCCCCCEEEETTHHHHH
T ss_pred HHHhCCCcCcccccCChHHHHHHhhcccccccHHHHhhhhhhhhhccChhhhcccCCcEEEEEcccccc
Confidence 233222 24443321 111235678999999999977
No 54
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=95.30 E-value=0.077 Score=48.06 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=33.9
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcC---CCEEEEcCCCCCchhhhHHHHHHHHHc
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISG---LDSVAITETGSGKTLAFLLPMLRHIWE 185 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~g---rdvi~~a~TGSGKTlafllpil~~l~~ 185 (494)
++|+++-.++.+.+.|... +.++ +.+|++||+|+|||.+.. -+...+..
T Consensus 9 ~~~~dlig~~~~~~~L~~~---------------i~~~~~~~~~Ll~Gp~G~GKtt~a~-~~~~~l~~ 60 (239)
T d1njfa_ 9 QTFADVVGQEHVLTALANG---------------LSLGRIHHAYLFSGTRGVGKTSIAR-LLAKGLNC 60 (239)
T ss_dssp SSGGGSCSCHHHHHHHHHH---------------HHTTCCCSEEEEECSTTSSHHHHHH-HHHHHHHC
T ss_pred CCHHHccChHHHHHHHHHH---------------HHcCCCCeeEEEECCCCCcHHHHHH-HHHHHhcC
Confidence 5788888888888877542 2223 348999999999997544 45555554
No 55
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.13 E-value=0.018 Score=51.70 Aligned_cols=127 Identities=12% Similarity=0.111 Sum_probs=61.0
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcC--CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeE
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISG--LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVG 198 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~g--rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~a 198 (494)
++|+++=.++.+++.|+.. +..+ .++|++||+|+|||.+.-+ +.+.+..... ....
T Consensus 12 ~~~~d~ig~~~~~~~L~~~---------------~~~~~~~~~ll~Gp~G~GKTt~a~~-la~~l~~~~~------~~~~ 69 (224)
T d1sxjb2 12 QVLSDIVGNKETIDRLQQI---------------AKDGNMPHMIISGMPGIGKTTSVHC-LAHELLGRSY------ADGV 69 (224)
T ss_dssp SSGGGCCSCTHHHHHHHHH---------------HHSCCCCCEEEECSTTSSHHHHHHH-HHHHHHGGGH------HHHE
T ss_pred CCHHHhcCCHHHHHHHHHH---------------HHcCCCCeEEEECCCCCCchhhHHH-HHHHHhcccc------cccc
Confidence 4566665666666666532 1223 2689999999999975433 2333321100 1112
Q ss_pred EEEccchhHHHhhhhhhHHHHHHHhcCcceecccceEEEEEcccchhcccCChhHHHHHHHhhcCCCcEEEecCC
Q 042373 199 LVMAPTGELVRQQVRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSPT 273 (494)
Q Consensus 199 LIl~PTreLa~Qi~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfSAT 273 (494)
+.+.....-.... .-..+..+.... ......+.+++|+||+|.|.... ...+...+...+....+++.+..
T Consensus 70 ~~~n~~~~~~~~~-i~~~~~~~~~~~--~~~~~~~~kviiiDe~d~~~~~~-~~~ll~~~e~~~~~~~~i~~~~~ 140 (224)
T d1sxjb2 70 LELNASDDRGIDV-VRNQIKHFAQKK--LHLPPGKHKIVILDEADSMTAGA-QQALRRTMELYSNSTRFAFACNQ 140 (224)
T ss_dssp EEECTTSCCSHHH-HHTHHHHHHHBC--CCCCTTCCEEEEEESGGGSCHHH-HHTTHHHHHHTTTTEEEEEEESC
T ss_pred ccccccccCCcee-hhhHHHHHHHhh--ccCCCcceEEEEEecccccchhH-HHHHhhhccccccceeeeeccCc
Confidence 2222221111000 011122223221 12334567899999999988542 22333344444444455554443
No 56
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=95.12 E-value=0.016 Score=54.01 Aligned_cols=107 Identities=16% Similarity=0.130 Sum_probs=56.6
Q ss_pred CCCcccCCCCHHHHHHHHhC--CCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCe
Q 042373 120 IKTWRQTGLTTKILETFSKL--NHENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPV 197 (494)
Q Consensus 120 i~~f~~l~L~~~ll~~l~~~--g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~ 197 (494)
-.+|++++-.+.+.+.|.+. -+..|..+|... +-..+.+++++|+|||||+.. -.+.+-. +..
T Consensus 8 ~~t~~Di~Gl~~~k~~l~e~v~~~~~~~~~~~~g---~~~~~~iLL~GppGtGKT~la--~~iA~~~----------~~~ 72 (256)
T d1lv7a_ 8 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLG---GKIPKGVLMVGPPGTGKTLLA--KAIAGEA----------KVP 72 (256)
T ss_dssp CCCGGGSCSCHHHHHHTHHHHHHHHCGGGC--------CCCCEEEEECCTTSCHHHHH--HHHHHHH----------TCC
T ss_pred CCCHHHHhchHHHHHHHHHHHHHHHCHHHHHHcC---CCCCCeEEeeCCCCCCccHHH--HHHHHHc----------CCC
Confidence 35799988777777666431 022222222211 112377999999999999742 2333322 222
Q ss_pred EEEEccchhHHHhh--hhhhHHHHHHHhcCcceecccceEEEEEcccchhcc
Q 042373 198 GLVMAPTGELVRQQ--VRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMFD 247 (494)
Q Consensus 198 aLIl~PTreLa~Qi--~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml~ 247 (494)
.+.+.+ ..|.... .|+.++..++..- .-..=.+|++||+|.++.
T Consensus 73 ~~~i~~-~~l~~~~~g~~~~~l~~~f~~A-----~~~~P~il~iDeiD~l~~ 118 (256)
T d1lv7a_ 73 FFTISG-SDFVEMFVGVGASRVRDMFEQA-----KKAAPCIIFIDEIDAVGR 118 (256)
T ss_dssp EEEECS-CSSTTSCCCCCHHHHHHHHHHH-----HTTCSEEEEETTHHHHTC
T ss_pred EEEEEh-HHhhhcchhHHHHHHHHHHHHH-----HHcCCEEEEEEChhhhCc
Confidence 344333 3333221 3455555555431 112335788999999874
No 57
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]}
Probab=94.99 E-value=0.042 Score=48.94 Aligned_cols=111 Identities=18% Similarity=0.172 Sum_probs=64.7
Q ss_pred HHHHHHHHHc---CCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhH--HHhhhhhhHHHHHHH
Q 042373 148 QAPASALIIS---GLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL--VRQQVRRGRMIDLLC 222 (494)
Q Consensus 148 Q~~aip~il~---grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreL--a~Qi~TPgrl~dll~ 222 (494)
|.+.+..+.. +..++++++.|+|||..... +...+.... ...|-.+++.|...- ..|+ ..+.+.+.
T Consensus 2 ~~~~l~~~i~~~~~~~~l~~G~~g~gk~~~a~~-l~~~i~~~~-----~~h~D~~~i~~~~~~I~Id~I---R~i~~~~~ 72 (198)
T d2gnoa2 2 QLETLKRIIEKSEGISILINGEDLSYPREVSLE-LPEYVEKFP-----PKASDVLEIDPEGENIGIDDI---RTIKDFLN 72 (198)
T ss_dssp HHHHHHHHHHTCSSEEEEEECSSSSHHHHHHHH-HHHHHHTSC-----CCTTTEEEECCSSSCBCHHHH---HHHHHHHT
T ss_pred HHHHHHHHHhcCCCceEEEECCCCCCHHHHHHH-HHHHHhccc-----cCCCCEEEEeCCcCCCCHHHH---HHHHHHHh
Confidence 5555555553 35899999999999965443 334443221 126778999885321 2222 12444444
Q ss_pred hcCcceecccceEEEEEcccchhcccCChhHHHHHHHhhcCCCcEEEecC
Q 042373 223 KNGVKITNLTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFSP 272 (494)
Q Consensus 223 ~~~~~~~~l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfSA 272 (494)
... .....+++|+||||+|-... ...+.++++.-+....+++.+.
T Consensus 73 ~~~----~~~~~KviIId~ad~l~~~a-qNaLLK~LEEPp~~t~fiLit~ 117 (198)
T d2gnoa2 73 YSP----ELYTRKYVIVHDCERMTQQA-ANAFLKALEEPPEYAVIVLNTR 117 (198)
T ss_dssp SCC----SSSSSEEEEETTGGGBCHHH-HHHTHHHHHSCCTTEEEEEEES
T ss_pred hCc----ccCCCEEEEEeCccccchhh-hhHHHHHHhCCCCCceeeeccC
Confidence 321 24567899999999997432 3344455554455556665544
No 58
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=94.63 E-value=0.059 Score=49.53 Aligned_cols=74 Identities=15% Similarity=0.173 Sum_probs=37.7
Q ss_pred CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhhhh-hhHHHHHHHhcCcceecccceEEE
Q 042373 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVR-RGRMIDLLCKNGVKITNLTRVTYL 237 (494)
Q Consensus 159 rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi~T-Pgrl~dll~~~~~~~~~l~~l~~l 237 (494)
+.+|++||+|+|||...- .+..-.. .|..-+-+|..-....-.+ ...+..++... .-..-.+|
T Consensus 41 ~~vLL~GppGtGKT~la~--alA~~~~---------~~~~~i~~~~~~~g~~~~~~~~~i~~if~~A-----~~~~p~il 104 (246)
T d1d2na_ 41 VSVLLEGPPHSGKTALAA--KIAEESN---------FPFIKICSPDKMIGFSETAKCQAMKKIFDDA-----YKSQLSCV 104 (246)
T ss_dssp EEEEEECSTTSSHHHHHH--HHHHHHT---------CSEEEEECGGGCTTCCHHHHHHHHHHHHHHH-----HTSSEEEE
T ss_pred eEEEEECcCCCCHHHHHH--HHhhccc---------ccccccccccccccccccchhhhhhhhhhhh-----hhccccee
Confidence 469999999999997432 2222221 3344444443111100011 12233343321 11233689
Q ss_pred EEcccchhccc
Q 042373 238 VLDEADRMFDM 248 (494)
Q Consensus 238 VlDEaD~ml~~ 248 (494)
++||+|.++..
T Consensus 105 ~iDEid~l~~~ 115 (246)
T d1d2na_ 105 VVDDIERLLDY 115 (246)
T ss_dssp EECCHHHHTTC
T ss_pred ehhhhhhHhhh
Confidence 99999998753
No 59
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=94.25 E-value=0.027 Score=54.25 Aligned_cols=66 Identities=23% Similarity=0.188 Sum_probs=38.0
Q ss_pred HHHHhCCCCCC---ChhHHHH-HHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHH
Q 042373 134 ETFSKLNHENP---VAIQAPA-SALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVR 209 (494)
Q Consensus 134 ~~l~~~g~~~p---tpiQ~~a-ip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~ 209 (494)
..+...|+-.. .+-+... ..++..+++++++++||||||.. +-.++..+-. .-+.+++--+.||..
T Consensus 138 ~~l~~~g~~~~~~~~~~~~~~l~~~v~~~~nili~G~tgSGKTT~-l~al~~~i~~---------~~rivtiEd~~El~l 207 (323)
T d1g6oa_ 138 SFFEEQGFYNLLDNKEQAISAIKDGIAIGKNVIVCGGTGSGKTTY-IKSIMEFIPK---------EERIISIEDTEEIVF 207 (323)
T ss_dssp HHHHHTTTTTTCSSHHHHHHHHHHHHHHTCCEEEEESTTSSHHHH-HHHHGGGSCT---------TCCEEEEESSCCCCC
T ss_pred HHHHHHhhhcccccHHHHHHHHHHHHHhCCCEEEEeeccccchHH-HHHHhhhccc---------ccceeeccchhhhhc
Confidence 34455555432 2333333 33455779999999999999963 3334333211 335666667777643
No 60
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=93.89 E-value=0.13 Score=46.32 Aligned_cols=113 Identities=17% Similarity=0.167 Sum_probs=59.1
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccch-hHH-Hhh--------------hhhhHHHHHHHhc
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTG-ELV-RQQ--------------VRRGRMIDLLCKN 224 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTr-eLa-~Qi--------------~TPgrl~dll~~~ 224 (494)
+++++|||+|||.+-.= +-.++..+. ...+||-+-|. .=+ .|. .++..+...+...
T Consensus 15 i~lvGptGvGKTTTiAK-LA~~~~~~g-------~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~~~~~~~~~~~a 86 (211)
T d1j8yf2 15 IMLVGVQGTGKATTAGK-LAYFYKKKG-------FKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPGEKDVVGIAKRG 86 (211)
T ss_dssp EEEECSCCC----HHHH-HHHHHHHTT-------CCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTTCCCHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH-HHHHHHHCC-------CceEEEEeeccccchhHHHHHhccccCcceeecccchhhhHHHHHH
Confidence 55689999999975432 223333221 34677777653 333 333 1233333322211
Q ss_pred CcceecccceEEEEEcccchhccc---CChhHHHHHHHhhcCCCcEEEecCCCChHHHHHH
Q 042373 225 GVKITNLTRVTYLVLDEADRMFDM---GFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILA 282 (494)
Q Consensus 225 ~~~~~~l~~l~~lVlDEaD~ml~~---gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~ 282 (494)
.........+++++|=+-+.-.. ....++..+...+++..-.+.++|+...+....+
T Consensus 87 -~~~~~~~~~d~IlIDTaGr~~~~~~~~~~~el~~~~~~~~~~~~~LVl~a~~~~~~~~~~ 146 (211)
T d1j8yf2 87 -VEKFLSEKMEIIIVDTAGRHGYGEEAALLEEMKNIYEAIKPDEVTLVIDASIGQKAYDLA 146 (211)
T ss_dssp -HHHHHHTTCSEEEEECCCSCCTTCHHHHHHHHHHHHHHHCCSEEEEEEEGGGGGGHHHHH
T ss_pred -HHHhhccCCceEEEecCCcCccchhhHHHHHHHHHHhhcCCceEEEEEecccCcchHHHH
Confidence 00112456789999998764321 1234566777777777777888998866554433
No 61
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence recognition protein Ffh {Thermus aquaticus [TaxId: 271]}
Probab=93.87 E-value=0.054 Score=48.68 Aligned_cols=54 Identities=17% Similarity=0.237 Sum_probs=38.7
Q ss_pred ccceEEEEEcccchhccc-CChhHHHHHHHhhcCCCcEEEecCCCChHHHHHHHh
Q 042373 231 LTRVTYLVLDEADRMFDM-GFEPQITRIVQNIRPDRQAVLFSPTFPPRVEILARK 284 (494)
Q Consensus 231 l~~l~~lVlDEaD~ml~~-gf~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~~~ 284 (494)
++..+++++|=+-+.... ....++..+.+.+.+..-+++++|+........+..
T Consensus 90 ~~~~d~vlIDTaGr~~~d~~~~~el~~~~~~~~~~~~llv~~a~~~~~~~~~~~~ 144 (207)
T d1ls1a2 90 LEARDLILVDTAGRLQIDEPLMGELARLKEVLGPDEVLLVLDAMTGQEALSVARA 144 (207)
T ss_dssp HHTCCEEEEECCCCSSCCHHHHHHHHHHHHHHCCSEEEEEEEGGGTHHHHHHHHH
T ss_pred hccCcceeecccccchhhhhhHHHHHHHHhhcCCceEEEEeccccchhHHHHHHH
Confidence 567789999999876532 234556666777777777888999988877666643
No 62
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=93.86 E-value=0.078 Score=49.55 Aligned_cols=94 Identities=16% Similarity=0.116 Sum_probs=48.0
Q ss_pred CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh---hhhhHHHHHHHhcCcceecccceE
Q 042373 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ---VRRGRMIDLLCKNGVKITNLTRVT 235 (494)
Q Consensus 159 rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi---~TPgrl~dll~~~~~~~~~l~~l~ 235 (494)
+|++++|+.|.|||.. +--+.+.+....- .....+...+.+.+.+=++-.. ..-.|+..++..-. ...+ -
T Consensus 40 ~n~lLVG~~GvGKTal-v~~la~ri~~~~v-p~~l~~~~i~~l~~~~liag~~~~g~~e~r~~~i~~~~~----~~~~-i 112 (268)
T d1r6bx2 40 NNPLLVGESGVGKTAI-AEGLAWRIVQGDV-PEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLE----QDTN-S 112 (268)
T ss_dssp CEEEEECCTTSSHHHH-HHHHHHHHHHTCS-CGGGTTCEEEECCCC---CCCCCSSCHHHHHHHHHHHHS----SSSC-E
T ss_pred CCcEEECCCCCcHHHH-HHHHHHHHHhCCc-ccccccceeEEeeechHhccCccchhHHHHHHHHHHHhh----ccCC-c
Confidence 5899999999999953 3334444443221 1111133445554444443221 12234444444311 1122 3
Q ss_pred EEEEcccchhcccCC----hhHHHHHHH
Q 042373 236 YLVLDEADRMFDMGF----EPQITRIVQ 259 (494)
Q Consensus 236 ~lVlDEaD~ml~~gf----~~~i~~Il~ 259 (494)
++++||+|.|+..|. ...+..+++
T Consensus 113 IlfiDeih~l~~~g~~~g~~~d~a~~Lk 140 (268)
T d1r6bx2 113 ILFIDEIHTIIGAGAASGGQVDAANLIK 140 (268)
T ss_dssp EEEETTTTTTTTSCCSSSCHHHHHHHHS
T ss_pred eEEecchHHHhcCCCCCCccccHHHHhh
Confidence 788999999987653 234555554
No 63
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.71 E-value=0.11 Score=46.41 Aligned_cols=43 Identities=19% Similarity=0.128 Sum_probs=28.3
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhH
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTLAFL 176 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafl 176 (494)
++|+++-.++.+.+.|... ++. -.-.++|++||+|+|||.+.-
T Consensus 21 ~~~~diig~~~~~~~l~~~-------i~~------~~~~~lll~Gp~G~GKTtla~ 63 (231)
T d1iqpa2 21 QRLDDIVGQEHIVKRLKHY-------VKT------GSMPHLLFAGPPGVGKTTAAL 63 (231)
T ss_dssp CSTTTCCSCHHHHHHHHHH-------HHH------TCCCEEEEESCTTSSHHHHHH
T ss_pred CCHHHccCcHHHHHHHHHH-------HHc------CCCCeEEEECCCCCcHHHHHH
Confidence 3677777777777776542 000 012469999999999996543
No 64
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Probab=93.65 E-value=0.078 Score=44.84 Aligned_cols=40 Identities=15% Similarity=0.135 Sum_probs=23.5
Q ss_pred ccceEEEEEcccchhcccCChhHHHHHHHhhcCCCcEEEec
Q 042373 231 LTRVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVLFS 271 (494)
Q Consensus 231 l~~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~ilfS 271 (494)
..+.+++++||++...... ...+..+.+.+.....+++++
T Consensus 97 ~~~~~vlllDE~~~~~~~~-~~~~~~l~~~l~~~~~~il~~ 136 (178)
T d1ye8a1 97 KDRRKVIIIDEIGKMELFS-KKFRDLVRQIMHDPNVNVVAT 136 (178)
T ss_dssp HCTTCEEEECCCSTTGGGC-HHHHHHHHHHHTCTTSEEEEE
T ss_pred hcCCCceeecCCCccchhh-HHHHHHHHHHhccCCCEEEEE
Confidence 4567899999987655432 334444455554444555543
No 65
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.61 E-value=0.079 Score=49.12 Aligned_cols=72 Identities=17% Similarity=0.150 Sum_probs=40.9
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHh-h-hhhhHHHHHHHhcCcceecccceE
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ-Q-VRRGRMIDLLCKNGVKITNLTRVT 235 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Q-i-~TPgrl~dll~~~~~~~~~l~~l~ 235 (494)
.+.+|++||+|+|||+.. -.+...+ +...+.+.+ -.++.. . .+...+..++..- ....=.
T Consensus 41 ~~giLL~Gp~GtGKT~l~-~ala~~~-----------~~~~~~~~~-~~l~~~~~~~~~~~l~~~f~~A-----~~~~p~ 102 (265)
T d1r7ra3 41 SKGVLFYGPPGCGKTLLA-KAIANEC-----------QANFISIKG-PELLTMWFGESEANVREIFDKA-----RQAAPC 102 (265)
T ss_dssp CCEEEEBCCTTSSHHHHH-HHHHHHT-----------TCEEEEECH-HHHHTSCTTTHHHHHHHHHHHH-----HHTCSE
T ss_pred CCeEEEECCCCCcchhHH-HHHHHHh-----------CCcEEEEEH-HHhhhccccchHHHHHHHHHHH-----HhcCCc
Confidence 367999999999999632 1222221 334444443 333322 2 3445555555431 122337
Q ss_pred EEEEcccchhcc
Q 042373 236 YLVLDEADRMFD 247 (494)
Q Consensus 236 ~lVlDEaD~ml~ 247 (494)
+|++||+|.++.
T Consensus 103 il~ideid~l~~ 114 (265)
T d1r7ra3 103 VLFFDELDSIAK 114 (265)
T ss_dssp EEEESSGGGTCC
T ss_pred ceeHHhhhhccc
Confidence 899999999884
No 66
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=93.49 E-value=0.087 Score=47.45 Aligned_cols=113 Identities=16% Similarity=0.181 Sum_probs=61.8
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccc-hhHHH-hh--------------hhhhHHHHHHHhc
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPT-GELVR-QQ--------------VRRGRMIDLLCKN 224 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PT-reLa~-Qi--------------~TPgrl~dll~~~ 224 (494)
+++++|||+|||.+-.= +-.++..+ +...+||-+-| |.=|. |. -++..+..++...
T Consensus 12 i~lvGptGvGKTTTiAK-LA~~~~~~-------g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~d~~~~l~~~ 83 (211)
T d2qy9a2 12 ILMVGVNGVGKTTTIGK-LARQFEQQ-------GKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIFDA 83 (211)
T ss_dssp EEEECCTTSCHHHHHHH-HHHHHHTT-------TCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTCCHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH-HHHHHHHC-------CCcEEEEecccccccchhhhhhhhhhcCCcccccccCCCHHHHHHHH
Confidence 45689999999976442 22333322 13456666666 44333 33 2333333333321
Q ss_pred CcceecccceEEEEEcccchhccc-CChhHHHHHHHhhc------CCCcEEEecCCCChHHHHHH
Q 042373 225 GVKITNLTRVTYLVLDEADRMFDM-GFEPQITRIVQNIR------PDRQAVLFSPTFPPRVEILA 282 (494)
Q Consensus 225 ~~~~~~l~~l~~lVlDEaD~ml~~-gf~~~i~~Il~~l~------~~~Q~ilfSAT~~~~v~~l~ 282 (494)
. .....+..+++++|=+-|+-.. ....++..+.+.++ +..-++.++|+........+
T Consensus 84 ~-~~a~~~~~d~ilIDTaGr~~~d~~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~ 147 (211)
T d2qy9a2 84 I-QAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQA 147 (211)
T ss_dssp H-HHHHHTTCSEEEECCCCCGGGHHHHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHH
T ss_pred H-HHHHHcCCCEEEeccCCCccccHHHHHHHHHHHHHHhhhcccCcceeeeehhcccCcchHHHH
Confidence 0 0112456789999999875432 23345555555553 34456778898876554433
No 67
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.34 E-value=0.055 Score=49.99 Aligned_cols=71 Identities=11% Similarity=0.127 Sum_probs=39.0
Q ss_pred CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh--hhhhHHHHHHHhcCcceecccceEE
Q 042373 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ--VRRGRMIDLLCKNGVKITNLTRVTY 236 (494)
Q Consensus 159 rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi--~TPgrl~dll~~~~~~~~~l~~l~~ 236 (494)
+.+|+.+|+|||||+. .-.+.+-. +-..+++.++. +.... .+...+..++... ....-.+
T Consensus 39 ~giLL~GppGtGKT~l--~~ala~~~----------~~~~~~i~~~~-l~~~~~g~~~~~l~~~f~~A-----~~~~p~i 100 (258)
T d1e32a2 39 RGILLYGPPGTGKTLI--ARAVANET----------GAFFFLINGPE-IMSKLAGESESNLRKAFEEA-----EKNAPAI 100 (258)
T ss_dssp CEEEEECCTTSSHHHH--HHHHHHHT----------TCEEEEECHHH-HTTSCTTHHHHHHHHHHHHH-----HHTCSEE
T ss_pred ceeEEecCCCCCchHH--HHHHHHHh----------CCeEEEEEchh-hcccccccHHHHHHHHHHHH-----HhcCCeE
Confidence 6799999999999973 22222211 33445554433 33322 1223333333221 1223468
Q ss_pred EEEcccchhcc
Q 042373 237 LVLDEADRMFD 247 (494)
Q Consensus 237 lVlDEaD~ml~ 247 (494)
|++||+|.++.
T Consensus 101 l~iDeid~l~~ 111 (258)
T d1e32a2 101 IFIDELDAIAP 111 (258)
T ss_dssp EEESSGGGTCC
T ss_pred EEehhhhhhcc
Confidence 99999999874
No 68
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=93.06 E-value=0.11 Score=49.08 Aligned_cols=19 Identities=32% Similarity=0.286 Sum_probs=16.5
Q ss_pred cCCCEEEEcCCCCCchhhh
Q 042373 157 SGLDSVAITETGSGKTLAF 175 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTlaf 175 (494)
..+.+++++|||+|||+..
T Consensus 48 ~~~~iLl~GPpG~GKT~lA 66 (309)
T d1ofha_ 48 TPKNILMIGPTGVGKTEIA 66 (309)
T ss_dssp CCCCEEEECCTTSSHHHHH
T ss_pred CCceEEEECCCCCCHHHHH
Confidence 4689999999999999754
No 69
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus stearothermophilus, PcrA [TaxId: 1422]}
Probab=92.76 E-value=0.073 Score=54.32 Aligned_cols=64 Identities=19% Similarity=0.068 Sum_probs=45.6
Q ss_pred CCCCChhHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh
Q 042373 141 HENPVAIQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ 211 (494)
Q Consensus 141 ~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi 211 (494)
...+|+-|..+|- -...+++|+|..|||||.+.+--+...+... ... .-..|+|+.||..|.++
T Consensus 9 ~~~L~~eQ~~~v~--~~~~~~lV~A~AGSGKT~~lv~ri~~ll~~~-~~~----p~~Il~ltft~~Aa~ei 72 (623)
T g1qhh.1 9 LAHLNKEQQEAVR--TTEGPLLIMAGAGSGKTRVLTHRIAYLMAEK-HVA----PWNILAITFTNKAAREM 72 (623)
T ss_dssp HTTSCHHHHHHHH--CCSSCEEEEECTTSCHHHHHHHHHHHHHHTT-CCC----GGGEEEEESSHHHHHHH
T ss_pred HHhcCHHHHHHHc--CCCCCEEEEEeCchHHHHHHHHHHHHHHHcC-CCC----cccEEEEeccHHHHHHH
Confidence 3578999999885 2356799999999999987765554444332 111 22589999999887765
No 70
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.30 E-value=0.12 Score=45.97 Aligned_cols=15 Identities=27% Similarity=0.339 Sum_probs=13.3
Q ss_pred CEEEEcCCCCCchhh
Q 042373 160 DSVAITETGSGKTLA 174 (494)
Q Consensus 160 dvi~~a~TGSGKTla 174 (494)
+++++||+|+|||..
T Consensus 35 ~lll~Gp~G~GKTtl 49 (237)
T d1sxjd2 35 HMLFYGPPGTGKTST 49 (237)
T ss_dssp CEEEECSTTSSHHHH
T ss_pred eEEEECCCCCChHHH
Confidence 589999999999964
No 71
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.18 E-value=0.12 Score=46.45 Aligned_cols=53 Identities=13% Similarity=-0.064 Sum_probs=29.5
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHH-HHHH-----HHcCCCEEEEcCCCCCchhhh
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAP-ASAL-----IISGLDSVAITETGSGKTLAF 175 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~-aip~-----il~grdvi~~a~TGSGKTlaf 175 (494)
++|+++-.++..++.|+.. +.. ...... .++. ....+.++++||+|+|||.+.
T Consensus 11 ~~~~dlig~~~~~~~L~~~-l~~-~~~~~~~~~~~~~~~~~~~~~~lll~GPpG~GKTt~a 69 (253)
T d1sxja2 11 TNLQQVCGNKGSVMKLKNW-LAN-WENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAA 69 (253)
T ss_dssp SSGGGCCSCHHHHHHHHHH-HHT-HHHHHHTTTCCCCTTSTTSCSEEEEECSTTSSHHHHH
T ss_pred CCHHHhcCCHHHHHHHHHH-HHh-hhhcchhhhhhhcccCCCCCceEEEECCCCCCHHHHH
Confidence 4688888888887777542 000 000000 0000 001246999999999999643
No 72
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=92.16 E-value=0.25 Score=44.04 Aligned_cols=44 Identities=14% Similarity=-0.020 Sum_probs=28.4
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHc----CCCEEEEcCCCCCchhhhH
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIIS----GLDSVAITETGSGKTLAFL 176 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~----grdvi~~a~TGSGKTlafl 176 (494)
++|+++--.+.+.+.|+.. +..... -.++|++||+|+|||...-
T Consensus 6 ~~~ddivGq~~~~~~L~~~------------i~~~~~~~~~~~~~Ll~GPpG~GKTtla~ 53 (239)
T d1ixsb2 6 KTLDEYIGQERLKQKLRVY------------LEAAKARKEPLEHLLLFGPPGLGKTTLAH 53 (239)
T ss_dssp CSGGGSCSCHHHHHHHHHH------------HHHHTTSSSCCCCEEEECCTTSCHHHHHH
T ss_pred CCHHHhCCHHHHHHHHHHH------------HHHHHhcCCCCCeEEEECCCCCCHHHHHH
Confidence 3688876667776666432 111111 2579999999999997543
No 73
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=92.05 E-value=0.12 Score=46.28 Aligned_cols=91 Identities=20% Similarity=0.164 Sum_probs=50.1
Q ss_pred CCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcC---CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCe
Q 042373 121 KTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISG---LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPV 197 (494)
Q Consensus 121 ~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~g---rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~ 197 (494)
.+|+++--.+.+++.|+.. . + -....+ .++|++||+|+|||.+.-+ +...+ +..
T Consensus 6 ~~~~divGqe~~~~~l~~~-i------~----~~~~~~~~~~~~L~~GPpGtGKT~lA~~-la~~~-----------~~~ 62 (238)
T d1in4a2 6 KSLDEFIGQENVKKKLSLA-L------E----AAKMRGEVLDHVLLAGPPGLGKTTLAHI-IASEL-----------QTN 62 (238)
T ss_dssp SSGGGCCSCHHHHHHHHHH-H------H----HHHHHTCCCCCEEEESSTTSSHHHHHHH-HHHHH-----------TCC
T ss_pred CcHHHcCChHHHHHHHHHH-H------H----HHHhcCCCCCeEEEECCCCCcHHHHHHH-HHhcc-----------CCC
Confidence 4688887777777666532 0 0 011122 4799999999999975433 33333 212
Q ss_pred EEEEccchhHHHhhhhhhHHHHHHHhcCcceecccceEEEEEcccchhc
Q 042373 198 GLVMAPTGELVRQQVRRGRMIDLLCKNGVKITNLTRVTYLVLDEADRMF 246 (494)
Q Consensus 198 aLIl~PTreLa~Qi~TPgrl~dll~~~~~~~~~l~~l~~lVlDEaD~ml 246 (494)
.+++..+.. .+++.+...+.... .-..+++||+|++.
T Consensus 63 ~~~~~~~~~-----~~~~~~~~~~~~~~-------~~~~~~ide~~~~~ 99 (238)
T d1in4a2 63 IHVTSGPVL-----VKQGDMAAILTSLE-------RGDVLFIDEIHRLN 99 (238)
T ss_dssp EEEEETTTC-----CSHHHHHHHHHHCC-------TTCEEEEETGGGCC
T ss_pred cccccCccc-----ccHHHHHHHHHhhc-------cCCchHHHHHHHhh
Confidence 333332211 23344444454321 22467899999875
No 74
>d1nkta4 c.37.1.19 (A:397-615) Translocation ATPase SecA, nucleotide-binding domains {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=91.99 E-value=0.24 Score=44.39 Aligned_cols=65 Identities=11% Similarity=0.206 Sum_probs=39.1
Q ss_pred Ecccchhccc---CChhHHHHHHHhhcCCCcEEEecCCCCh--HHHHHHHh-----------------------cCCccc
Q 042373 239 LDEADRMFDM---GFEPQITRIVQNIRPDRQAVLFSPTFPP--RVEILARK-----------------------TNVCNL 290 (494)
Q Consensus 239 lDEaD~ml~~---gf~~~i~~Il~~l~~~~Q~ilfSAT~~~--~v~~l~~~-----------------------~g~~~I 290 (494)
.|..|.++.. .|...+..|.......+.+++.+.++-. .+..+..+ ...-.|
T Consensus 6 ~D~~D~Vy~T~~~K~~Avv~ei~~~h~~GqPVLVGT~SVe~SE~lS~lL~~~gi~h~vLNAK~herEAeIIAqAG~~GaV 85 (219)
T d1nkta4 6 EDQSDLIYKTEEAKYIAVVDDVAERYAKGQPVLIGTTSVERSEYLSRQFTKRRIPHNVLNAKYHEQEATIIAVAGRRGGV 85 (219)
T ss_dssp EECCCEEESCHHHHHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEECSSCHHHHHHHHHTTTSTTCE
T ss_pred cCCCCeEEcCHHHHHHHHHHHHHHHHhcCCCEEEeeCcHHHHHHHHHHHHHhccchhccchhhHHHHHHHHHhcccCCcE
Confidence 4566666632 1334455555555567777777776532 22222222 334568
Q ss_pred eeeccccccCCCC
Q 042373 291 SIANSVRARGLDE 303 (494)
Q Consensus 291 LVaTdv~~rGlDi 303 (494)
-|||+.|.||-||
T Consensus 86 TIATNMAGRGTDI 98 (219)
T d1nkta4 86 TVATNMAGRGTDI 98 (219)
T ss_dssp EEEETTCSTTCCC
T ss_pred EeeccccCCCCce
Confidence 8999999999999
No 75
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=91.66 E-value=0.16 Score=45.41 Aligned_cols=115 Identities=17% Similarity=0.151 Sum_probs=59.1
Q ss_pred CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccc-hhHH-HhhhhhhH--------------HHHHHH
Q 042373 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPT-GELV-RQQVRRGR--------------MIDLLC 222 (494)
Q Consensus 159 rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PT-reLa-~Qi~TPgr--------------l~dll~ 222 (494)
+=+++++|||+|||.+-.= +-.++... + ...+||-+-| |.=| .|..+-++ +...+.
T Consensus 7 ~vi~lvGptGvGKTTTiaK-LA~~~~~~-----g--~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~ 78 (207)
T d1okkd2 7 RVVLVVGVNGVGKTTTIAK-LGRYYQNL-----G--KKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAY 78 (207)
T ss_dssp SEEEEECSTTSSHHHHHHH-HHHHHHTT-----T--CCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHH-HHHHHHHC-----C--CcEEEEEeccccccchhhHhhcccccCceEEeccCCccHHHHHH
Confidence 4467899999999976432 22333221 1 3355666665 4444 33322211 222221
Q ss_pred hcCcceecccceEEEEEcccchhccc-CChhHHHHHHHhh------cCCCcEEEecCCCChHHHHHH
Q 042373 223 KNGVKITNLTRVTYLVLDEADRMFDM-GFEPQITRIVQNI------RPDRQAVLFSPTFPPRVEILA 282 (494)
Q Consensus 223 ~~~~~~~~l~~l~~lVlDEaD~ml~~-gf~~~i~~Il~~l------~~~~Q~ilfSAT~~~~v~~l~ 282 (494)
.. ......++.++|++|=+-++... ....++..+.+.+ .+..-++.++||...+....+
T Consensus 79 ~~-~~~~~~~~~d~ilIDTaGr~~~d~~l~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~ 144 (207)
T d1okkd2 79 DA-VQAMKARGYDLLFVDTAGRLHTKHNLMEELKKVKRAIAKADPEEPKEVWLVLDAVTGQNGLEQA 144 (207)
T ss_dssp HH-HHHHHHHTCSEEEECCCCCCTTCHHHHHHHHHHHHHHHHHCTTCCSEEEEEEETTBCTHHHHHH
T ss_pred HH-HHHHHHCCCCEEEcCccccchhhHHHHHHHHHHHHHhhhcccCCCceEEEEeecccCchHHHHH
Confidence 10 00112456789999999876532 1223344444333 234456778898876544333
No 76
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal recognition particle receptor FtsY {Thermotoga maritima [TaxId: 2336]}
Probab=91.29 E-value=0.16 Score=45.61 Aligned_cols=110 Identities=14% Similarity=0.135 Sum_probs=58.0
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhH-HH-hhhh--------------hhHHHHHHHhc
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGEL-VR-QQVR--------------RGRMIDLLCKN 224 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreL-a~-Qi~T--------------Pgrl~dll~~~ 224 (494)
+++++|||+|||..-.= +..++..+. ...+||-+-|.-. |. |.-+ +..+...+...
T Consensus 14 i~lvGptGvGKTTTiAK-LAa~~~~~~-------~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~ 85 (213)
T d1vmaa2 14 IMVVGVNGTGKTTSCGK-LAKMFVDEG-------KSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDA 85 (213)
T ss_dssp EEEECCTTSSHHHHHHH-HHHHHHHTT-------CCEEEEEECTTCHHHHHHHHHHHHHHTCEEECCSTTCCHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH-HHHHHHHCC-------CceEEEeecccccchhHHHHHHhhhcCccccccCCCCcHHHHHHHH
Confidence 56689999999976432 223333321 4467777776433 32 3311 11111111110
Q ss_pred CcceecccceEEEEEcccchhccc-CChhHHHHHHHhhc------CCCcEEEecCCCChHHH
Q 042373 225 GVKITNLTRVTYLVLDEADRMFDM-GFEPQITRIVQNIR------PDRQAVLFSPTFPPRVE 279 (494)
Q Consensus 225 ~~~~~~l~~l~~lVlDEaD~ml~~-gf~~~i~~Il~~l~------~~~Q~ilfSAT~~~~v~ 279 (494)
......++.++|++|=+-+.... ....++..+...+. +...++.++||......
T Consensus 86 -~~~~~~~~~d~ilIDTaGr~~~d~~~~~el~~~~~~~~~~~~~~p~~~~LVl~a~~~~~~~ 146 (213)
T d1vmaa2 86 -VAHALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATTGQNGL 146 (213)
T ss_dssp -HHHHHHTTCSEEEEEECCCCSCHHHHHHHHHHHHHHGGGTCTTCCSEEEEEEEGGGHHHHH
T ss_pred -HHHHHHcCCCEEEEeccccccchHHHHHHHHHHHhhhhhccccccceeEEeeccccCcchh
Confidence 00112456789999999875432 12334555555443 34457788998766543
No 77
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=91.27 E-value=0.12 Score=51.24 Aligned_cols=58 Identities=26% Similarity=0.358 Sum_probs=42.9
Q ss_pred CCChhHHHHHHHHHcC-----CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhhh
Q 042373 143 NPVAIQAPASALIISG-----LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQV 212 (494)
Q Consensus 143 ~ptpiQ~~aip~il~g-----rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi~ 212 (494)
.|+--|=+||..+..| ++.++.|-||||||+... -++... +..+|||+|+..+|.|++
T Consensus 11 ~p~gDQP~aI~~l~~~l~~g~~~q~l~GltGS~ka~~iA-~l~~~~-----------~rp~LVVt~n~~~A~qL~ 73 (413)
T d1t5la1 11 EPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTIS-NVIAQV-----------NKPTLVIAHNKTLAGQLY 73 (413)
T ss_dssp CCCTTHHHHHHHHHHHHHHTCSEEEEEECTTSCHHHHHH-HHHHHH-----------TCCEEEECSSHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhcCCCcEEEeCCCCcHHHHHHH-HHHHHh-----------CCCEEEEeCCHHHHHHHH
Confidence 5777887877776654 678999999999996432 233332 334899999999999864
No 78
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=90.94 E-value=0.37 Score=42.70 Aligned_cols=36 Identities=22% Similarity=0.279 Sum_probs=23.6
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEc
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMA 202 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~ 202 (494)
|.-+++.+++|+|||.. ++-++..+..+ +..+++++
T Consensus 26 gsl~li~G~pGsGKT~l-~~qia~~~~~~--------~~~~~~is 61 (242)
T d1tf7a2 26 DSIILATGATGTGKTLL-VSRFVENACAN--------KERAILFA 61 (242)
T ss_dssp SCEEEEEECTTSSHHHH-HHHHHHHHHTT--------TCCEEEEE
T ss_pred CeEEEEEeCCCCCHHHH-HHHHHHHHHHh--------ccccceee
Confidence 46788899999999964 44444444332 44566665
No 79
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=90.87 E-value=0.55 Score=45.82 Aligned_cols=84 Identities=19% Similarity=0.171 Sum_probs=35.7
Q ss_pred CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhhhhh----hHHHHHHHhcCcceecccce
Q 042373 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRR----GRMIDLLCKNGVKITNLTRV 234 (494)
Q Consensus 159 rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi~TP----grl~dll~~~~~~~~~l~~l 234 (494)
.|+|++|+.|.|||.. +--+.+.+....- ...-.+.+.+.|-+.+=+| -.... .|+..++..- .....-
T Consensus 44 ~n~llvG~~GvGKtai-v~~la~~i~~~~v-p~~l~~~~i~~ld~~~l~a-g~~~~g~~e~r~~~i~~~~----~~~~~~ 116 (387)
T d1qvra2 44 NNPVLIGEPGVGKTAI-VEGLAQRIVKGDV-PEGLKGKRIVSLQMGSLLA-GAKYRGEFEERLKAVIQEV----VQSQGE 116 (387)
T ss_dssp CCCEEEECTTSCHHHH-HHHHHHHHHHTCS-CTTSTTCEEEEECC------------CHHHHHHHHHHHH----HTTCSS
T ss_pred CCCeEECCCCCCHHHH-HHHHHHHHHhCCC-CHHHcCceEEEeeHhhhhc-ccCcchhHHHHHHHHHHHh----ccCCCc
Confidence 5899999999999963 2233444444321 1111134455554544443 22222 3444444321 011112
Q ss_pred EEEEEcccchhcccC
Q 042373 235 TYLVLDEADRMFDMG 249 (494)
Q Consensus 235 ~~lVlDEaD~ml~~g 249 (494)
-.|++||+|.++..|
T Consensus 117 ~ilfide~h~l~~~g 131 (387)
T d1qvra2 117 VILFIDELHTVVGAG 131 (387)
T ss_dssp EEEEECCC-------
T ss_pred eEEEeccHHHHhcCC
Confidence 368999999998754
No 80
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=90.62 E-value=0.11 Score=46.20 Aligned_cols=84 Identities=25% Similarity=0.278 Sum_probs=44.4
Q ss_pred CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhhhhhh----HHHHHHHhcCcceecccce
Q 042373 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVRRG----RMIDLLCKNGVKITNLTRV 234 (494)
Q Consensus 159 rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi~TPg----rl~dll~~~~~~~~~l~~l 234 (494)
.|++++++.|.|||..- --+.+.+....- ...-.+.. ++.+-.-.|.......| |+..++..- .....=
T Consensus 44 ~n~lLvG~pGVGKTalv-~~LA~ri~~~~v-p~~L~~~~-i~~ld~~~LiAg~~~rG~~E~rl~~il~e~----~~~~~~ 116 (195)
T d1jbka_ 44 NNPVLIGEPGVGKTAIV-EGLAQRIINGEV-PEGLKGRR-VLALDMGALVAGAKYRGEFEERLKGVLNDL----AKQEGN 116 (195)
T ss_dssp CEEEEECCTTSCHHHHH-HHHHHHHHHTCS-CGGGTTCE-EEEECHHHHHTTTCSHHHHHHHHHHHHHHH----HHSTTT
T ss_pred CCeEEEecCCcccHHHH-HHHHHHHHhCCC-CHHHcCce-EEEeeHHHHhccCCccHHHHHHHHHHHHHH----hcCCCc
Confidence 59999999999999632 334444443221 11111333 55555555554443333 344444321 001111
Q ss_pred EEEEEcccchhcccC
Q 042373 235 TYLVLDEADRMFDMG 249 (494)
Q Consensus 235 ~~lVlDEaD~ml~~g 249 (494)
-.|++||+|.++..|
T Consensus 117 iILfIDeih~l~~~g 131 (195)
T d1jbka_ 117 VILFIDELHTMVGAG 131 (195)
T ss_dssp EEEEEETGGGGTT--
T ss_pred EEEEcchHHHHhcCC
Confidence 378999999998754
No 81
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal domain {Ureaplasma urealyticum [TaxId: 2130]}
Probab=89.43 E-value=0.58 Score=38.84 Aligned_cols=71 Identities=17% Similarity=0.174 Sum_probs=42.9
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccc---hhHHHhh-------------hhhhHHHHHHHhc
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPT---GELVRQQ-------------VRRGRMIDLLCKN 224 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PT---reLa~Qi-------------~TPgrl~dll~~~ 224 (494)
-++++|-.||||.- ++-.+++.... +.+++++-|. |.- ..+ .....+.+++...
T Consensus 5 ~~i~GpMfsGKTte-Li~~~~~~~~~--------~~kv~~ikp~~D~R~~-~~i~s~~g~~~~~~~~~~~~~~~~~~~~~ 74 (139)
T d2b8ta1 5 EFITGPMFAGKTAE-LIRRLHRLEYA--------DVKYLVFKPKIDTRSI-RNIQSRTGTSLPSVEVESAPEILNYIMSN 74 (139)
T ss_dssp EEEECSTTSCHHHH-HHHHHHHHHHT--------TCCEEEEEECCCGGGC-SSCCCCCCCSSCCEEESSTHHHHHHHHST
T ss_pred EEEEccccCHHHHH-HHHHHHHHHHC--------CCcEEEEEEccccccc-ceEEcccCceeeeEEeccchhhHHHHHhh
Confidence 46789999999964 44444444332 4568888886 421 112 2223444555432
Q ss_pred CcceecccceEEEEEcccchh
Q 042373 225 GVKITNLTRVTYLVLDEADRM 245 (494)
Q Consensus 225 ~~~~~~l~~l~~lVlDEaD~m 245 (494)
. ...+.+++.+|||+-+
T Consensus 75 ~----~~~~~dvI~IDE~QFf 91 (139)
T d2b8ta1 75 S----FNDETKVIGIDEVQFF 91 (139)
T ss_dssp T----SCTTCCEEEECSGGGS
T ss_pred c----cccCcCEEEechhhhc
Confidence 1 2357889999999864
No 82
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=88.98 E-value=0.5 Score=41.93 Aligned_cols=17 Identities=24% Similarity=0.477 Sum_probs=14.8
Q ss_pred CCEEEEcCCCCCchhhh
Q 042373 159 LDSVAITETGSGKTLAF 175 (494)
Q Consensus 159 rdvi~~a~TGSGKTlaf 175 (494)
..+++.||+|+|||.+.
T Consensus 44 ~~lll~GppGtGKT~l~ 60 (276)
T d1fnna2 44 PRATLLGRPGTGKTVTL 60 (276)
T ss_dssp CEEEEECCTTSSHHHHH
T ss_pred CceEEECCCCCCHHHHH
Confidence 68999999999999643
No 83
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=88.91 E-value=0.56 Score=42.50 Aligned_cols=37 Identities=14% Similarity=0.030 Sum_probs=24.1
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEc
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMA 202 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~ 202 (494)
|.=+++.|+||+|||. |++-+..++.... +-.+++++
T Consensus 35 G~l~vi~G~~G~GKT~-~~~~la~~~a~~~-------g~~v~~~s 71 (277)
T d1cr2a_ 35 GEVIMVTSGSGMGKST-FVRQQALQWGTAM-------GKKVGLAM 71 (277)
T ss_dssp TCEEEEECSTTSSHHH-HHHHHHHHHHHTS-------CCCEEEEE
T ss_pred CeEEEEEeCCCCCHHH-HHHHHHHhhhhhc-------ccceeEee
Confidence 5667888999999995 4444554443221 44677776
No 84
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.69 E-value=0.21 Score=41.59 Aligned_cols=27 Identities=15% Similarity=0.103 Sum_probs=20.6
Q ss_pred CCEEEEcCCCCCchhhhHHHHHHHHHcC
Q 042373 159 LDSVAITETGSGKTLAFLLPMLRHIWEQ 186 (494)
Q Consensus 159 rdvi~~a~TGSGKTlafllpil~~l~~~ 186 (494)
|++++.+|+|||||. .+--++..+...
T Consensus 2 k~v~ItG~~GtGKTt-l~~~i~~~l~~~ 28 (189)
T d2i3ba1 2 RHVFLTGPPGVGKTT-LIHKASEVLKSS 28 (189)
T ss_dssp CCEEEESCCSSCHHH-HHHHHHHHHHHT
T ss_pred cEEEEECCCCCcHHH-HHHHHHHHHHHC
Confidence 789999999999997 444566666543
No 85
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=88.66 E-value=1.6 Score=38.38 Aligned_cols=40 Identities=15% Similarity=0.127 Sum_probs=26.2
Q ss_pred CCCCCCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcCCCEEEEcCCCCCchh
Q 042373 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISGLDSVAITETGSGKTL 173 (494)
Q Consensus 117 P~pi~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~grdvi~~a~TGSGKTl 173 (494)
|.|+.+-++|-=-...++.|.+. .++.+++.|+.|+|||.
T Consensus 5 ~~p~~~~~~f~GR~~el~~l~~~-----------------~~~~i~i~G~~G~GKTs 44 (283)
T d2fnaa2 5 TSPKDNRKDFFDREKEIEKLKGL-----------------RAPITLVLGLRRTGKSS 44 (283)
T ss_dssp SSCCCSGGGSCCCHHHHHHHHHT-----------------CSSEEEEEESTTSSHHH
T ss_pred CCCCCChhhCCChHHHHHHHHhc-----------------cCCEEEEEcCCCCcHHH
Confidence 45555555554444555555431 34678999999999996
No 86
>d1g5ta_ c.37.1.11 (A:) ATP:corrinoid adenosyltransferase CobA {Salmonella typhimurium [TaxId: 90371]}
Probab=87.42 E-value=1.5 Score=37.19 Aligned_cols=51 Identities=14% Similarity=0.160 Sum_probs=41.1
Q ss_pred cceEEEEEcccchhcccCC--hhHHHHHHHhhcCCCcEEEecCCCChHHHHHH
Q 042373 232 TRVTYLVLDEADRMFDMGF--EPQITRIVQNIRPDRQAVLFSPTFPPRVEILA 282 (494)
Q Consensus 232 ~~l~~lVlDEaD~ml~~gf--~~~i~~Il~~l~~~~Q~ilfSAT~~~~v~~l~ 282 (494)
..+++|||||+-..+..|+ .+.+..+++.-|...-+|+..-..|+++..++
T Consensus 93 ~~~dllILDEi~~Ai~~gli~~~~v~~ll~~rp~~~evVlTGr~~p~~L~e~A 145 (157)
T d1g5ta_ 93 PLLDMVVLDELTYMVAYDYLPLEEVISALNARPGHQTVIITGRGCHRDILDLA 145 (157)
T ss_dssp TTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCTTCEEEEECSSCCHHHHHHC
T ss_pred CccCEEeHHHHHHHHHcCCCCHHHHHHHHHhCCCCCEEEEECCCCCHHHHHhc
Confidence 4589999999999998886 45777788877777778887777888887765
No 87
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=87.37 E-value=0.24 Score=48.26 Aligned_cols=46 Identities=13% Similarity=0.222 Sum_probs=32.6
Q ss_pred HcCCCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHh
Q 042373 156 ISGLDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQ 210 (494)
Q Consensus 156 l~grdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Q 210 (494)
...++++++|+||||||.++ ..++..++.. +..++|+=|.-+++..
T Consensus 48 ~~~~H~~I~G~tGsGKT~~l-~~li~~~~~~--------g~~~iiiD~kge~~~~ 93 (433)
T d1e9ra_ 48 AEPRHLLVNGATGTGKSVLL-RELAYTGLLR--------GDRMVIVDPNGDMLSK 93 (433)
T ss_dssp GGGGCEEEEECTTSSHHHHH-HHHHHHHHHT--------TCEEEEEEETTHHHHH
T ss_pred cccceEEEEeCCCCcHHHHH-HHHHHHHHhC--------CCCEEEEeCChhHHHH
Confidence 44579999999999999764 4455555443 4567777888777654
No 88
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=86.51 E-value=0.2 Score=47.87 Aligned_cols=100 Identities=12% Similarity=0.064 Sum_probs=49.7
Q ss_pred CC-EEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh-hhhhHHHHHHHhcCcceecccceEE
Q 042373 159 LD-SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ-VRRGRMIDLLCKNGVKITNLTRVTY 236 (494)
Q Consensus 159 rd-vi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi-~TPgrl~dll~~~~~~~~~l~~l~~ 236 (494)
+. +++.+|+|+|||+..- .+-..+..+ -+. +.|..+.-+..-+ -+..++.+++..-. .-.+
T Consensus 123 ~g~~l~~G~pG~GKT~la~-ala~~~~~~--------~~~-~~~~~~~~~~~~~G~~e~~~~~~f~~a~-------~~~i 185 (321)
T d1w44a_ 123 SGMVIVTGKGNSGKTPLVH-ALGEALGGK--------DKY-ATVRFGEPLSGYNTDFNVFVDDIARAML-------QHRV 185 (321)
T ss_dssp SEEEEEECSSSSCHHHHHH-HHHHHHHTT--------SCC-EEEEBSCSSTTCBCCHHHHHHHHHHHHH-------HCSE
T ss_pred CceEEEECCCCccHHHHHH-HHHHHhcCC--------CCe-EEEEhhHhhhcccchHHHHHHHHHHHHh-------hccE
Confidence 44 4558999999997432 122222111 111 1122221111111 34566777766421 1248
Q ss_pred EEEcccchhcccC--------ChhHHHHHHHhh---cCCCcEEEecCCCC
Q 042373 237 LVLDEADRMFDMG--------FEPQITRIVQNI---RPDRQAVLFSPTFP 275 (494)
Q Consensus 237 lVlDEaD~ml~~g--------f~~~i~~Il~~l---~~~~Q~ilfSAT~~ 275 (494)
|++||+|.+.... -...+..++..+ .....++++.||-|
T Consensus 186 lf~DEid~~~~~r~~~~~~~~~~r~v~~lL~e~dg~~~~~~v~viaatN~ 235 (321)
T d1w44a_ 186 IVIDSLKNVIGAAGGNTTSGGISRGAFDLLSDIGAMAASRGCVVIASLNP 235 (321)
T ss_dssp EEEECCTTTC-----------CCHHHHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred EEeehhhhhccccccCCCCCcchhhhhhhhhhccccccCCCeEEEEeCCC
Confidence 9999999987422 123344444332 23345777778865
No 89
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=85.87 E-value=0.49 Score=43.10 Aligned_cols=17 Identities=29% Similarity=0.352 Sum_probs=14.9
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.-+.+++++|||||.
T Consensus 28 ~Ge~vaIvG~sGsGKST 44 (241)
T d2pmka1 28 QGEVIGIVGRSGSGKST 44 (241)
T ss_dssp TTCEEEEECSTTSSHHH
T ss_pred CCCEEEEECCCCCCHHH
Confidence 46778999999999996
No 90
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=85.17 E-value=0.32 Score=47.65 Aligned_cols=51 Identities=20% Similarity=0.203 Sum_probs=32.7
Q ss_pred CCCCCCcccCCCCHHHHHHHHhCCCCCCChhHHHHHHHHHcC--CCEEEEcCCCCCchhhhHHHHHHHHH
Q 042373 117 PKPIKTWRQTGLTTKILETFSKLNHENPVAIQAPASALIISG--LDSVAITETGSGKTLAFLLPMLRHIW 184 (494)
Q Consensus 117 P~pi~~f~~l~L~~~ll~~l~~~g~~~ptpiQ~~aip~il~g--rdvi~~a~TGSGKTlafllpil~~l~ 184 (494)
..+..++.++|+++..+..++ .++.. -=+|+.+|||||||... ..++..+.
T Consensus 131 ~~~~~~l~~LG~~~~~~~~l~----------------~l~~~~~GliLvtGpTGSGKSTTl-~~~l~~~~ 183 (401)
T d1p9ra_ 131 NATRLDLHSLGMTAHNHDNFR----------------RLIKRPHGIILVTGPTGSGKSTTL-YAGLQELN 183 (401)
T ss_dssp TTTCCCGGGSCCCHHHHHHHH----------------HHHTSSSEEEEEECSTTSCHHHHH-HHHHHHHC
T ss_pred cccchhhhhhcccHHHHHHHH----------------HHHhhhhceEEEEcCCCCCccHHH-HHHhhhhc
Confidence 344556777777766655554 33433 23788899999999654 44666664
No 91
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=84.95 E-value=0.14 Score=51.05 Aligned_cols=26 Identities=27% Similarity=0.217 Sum_probs=19.3
Q ss_pred cCCCEEEEcCCCCCchhhhHHHHHHHHH
Q 042373 157 SGLDSVAITETGSGKTLAFLLPMLRHIW 184 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTlafllpil~~l~ 184 (494)
..+|+|+++|||||||+.. =.|..+.
T Consensus 48 ~ksNILliGPTGvGKTlLA--r~LAk~l 73 (443)
T d1g41a_ 48 TPKNILMIGPTGVGKTEIA--RRLAKLA 73 (443)
T ss_dssp CCCCEEEECCTTSSHHHHH--HHHHHHT
T ss_pred ccccEEEECCCCCCHHHHH--HHHHHHh
Confidence 4689999999999999733 3444443
No 92
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.75 E-value=0.28 Score=40.61 Aligned_cols=35 Identities=23% Similarity=0.132 Sum_probs=24.0
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccc
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPT 204 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PT 204 (494)
-++++|-.||||. .++-.+...... +..++++-|.
T Consensus 5 ~li~GpMfsGKTt-~Li~~~~~~~~~--------g~~v~~ikp~ 39 (133)
T d1xbta1 5 QVILGPMFSGKST-ELMRRVRRFQIA--------QYKCLVIKYA 39 (133)
T ss_dssp EEEECCTTSCHHH-HHHHHHHHHHTT--------TCCEEEEEET
T ss_pred EEEEecccCHHHH-HHHHHHHHHHHc--------CCcEEEEecc
Confidence 4778999999996 455555554332 4467888775
No 93
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=83.47 E-value=0.63 Score=42.57 Aligned_cols=17 Identities=29% Similarity=0.515 Sum_probs=15.2
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.-+.+++|+|||||.
T Consensus 40 ~Ge~iaivG~sGsGKST 56 (253)
T d3b60a1 40 AGKTVALVGRSGSGKST 56 (253)
T ss_dssp TTCEEEEEECTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 57788999999999996
No 94
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=82.37 E-value=0.48 Score=43.52 Aligned_cols=17 Identities=24% Similarity=0.378 Sum_probs=15.1
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.-+.+++++|||||.
T Consensus 43 ~Ge~vaivG~sGsGKST 59 (255)
T d2hyda1 43 KGETVAFVGMSGGGKST 59 (255)
T ss_dssp TTCEEEEECSTTSSHHH
T ss_pred CCCEEEEECCCCCcHHH
Confidence 57788999999999996
No 95
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=82.10 E-value=0.55 Score=44.37 Aligned_cols=69 Identities=14% Similarity=0.213 Sum_probs=36.8
Q ss_pred CEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh------hhh---------hHHHHHHHhc
Q 042373 160 DSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ------VRR---------GRMIDLLCKN 224 (494)
Q Consensus 160 dvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi------~TP---------grl~dll~~~ 224 (494)
.+++++|||+|||...- .+...+.. ....++-....+..... ++| +.|...+...
T Consensus 55 ~~lf~Gp~G~GKt~lak--~la~~l~~--------~~~~~~~~~~~~~~~~~~~~~L~g~~~gyvG~~~~~~l~~~~~~~ 124 (315)
T d1qvra3 55 SFLFLGPTGVGKTELAK--TLAATLFD--------TEEAMIRIDMTEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRR 124 (315)
T ss_dssp EEEEBSCSSSSHHHHHH--HHHHHHHS--------SGGGEEEECTTTCCSSGGGGGC--------------CHHHHHHHC
T ss_pred EEEEECCCcchHHHHHH--HHHHHhcC--------CCcceEEEeccccccchhhhhhcCCCCCCcCcccCChHHHHHHhC
Confidence 47888999999997543 34333311 11123333443333221 222 3455555442
Q ss_pred CcceecccceEEEEEcccchhc
Q 042373 225 GVKITNLTRVTYLVLDEADRMF 246 (494)
Q Consensus 225 ~~~~~~l~~l~~lVlDEaD~ml 246 (494)
.-.+|++||+|.+-
T Consensus 125 --------p~~Vvl~DEieK~~ 138 (315)
T d1qvra3 125 --------PYSVILFDEIEKAH 138 (315)
T ss_dssp --------SSEEEEESSGGGSC
T ss_pred --------CCcEEEEehHhhcC
Confidence 23589999999865
No 96
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal domain {Clostridium acetobutylicum [TaxId: 1488]}
Probab=81.92 E-value=0.79 Score=38.14 Aligned_cols=71 Identities=17% Similarity=0.083 Sum_probs=39.9
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccc---hhHHHhhhhh----------hHHHHHHHhcCcc
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPT---GELVRQQVRR----------GRMIDLLCKNGVK 227 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PT---reLa~Qi~TP----------grl~dll~~~~~~ 227 (494)
-++++|-.||||.- |+-.+++.... +..++++.|. |--...+.|- ..+.++...
T Consensus 10 ~lI~GpMfSGKTte-Li~~~~~~~~~--------g~~vl~i~~~~D~Ry~~~~i~sh~g~~~~a~~~~~~~~~~~~---- 76 (141)
T d1xx6a1 10 EVIVGPMYSGKSEE-LIRRIRRAKIA--------KQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIKNSREILKY---- 76 (141)
T ss_dssp EEEECSTTSSHHHH-HHHHHHHHHHT--------TCCEEEEEEC-------CEEECTTSCEEECEEESSSTHHHHH----
T ss_pred EEEEeccccHHHHH-HHHHHHHhhhc--------CCcEEEEEeccccccccceeeecccceEEEEEecchhhhhhh----
Confidence 47789999999964 44455444332 5578888885 4333333111 011122211
Q ss_pred eecccceEEEEEcccchhc
Q 042373 228 ITNLTRVTYLVLDEADRMF 246 (494)
Q Consensus 228 ~~~l~~l~~lVlDEaD~ml 246 (494)
...+.+++.+|||+-+-
T Consensus 77 --~~~~~dvI~IDE~QFf~ 93 (141)
T d1xx6a1 77 --FEEDTEVIAIDEVQFFD 93 (141)
T ss_dssp --CCTTCSEEEECSGGGSC
T ss_pred --hcccccEEEEeehhhcc
Confidence 13467899999998643
No 97
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=77.95 E-value=0.72 Score=41.90 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=26.7
Q ss_pred ceEEEEEcccchhcccCChhHHHHHHHhhcCCCcEEE
Q 042373 233 RVTYLVLDEADRMFDMGFEPQITRIVQNIRPDRQAVL 269 (494)
Q Consensus 233 ~l~~lVlDEaD~ml~~gf~~~i~~Il~~l~~~~Q~il 269 (494)
+-+++|+||+-.-+|......+...+..+..++-+|+
T Consensus 157 ~p~ililDEpts~LD~~~~~~i~~~l~~l~~~~Tvi~ 193 (242)
T d1mv5a_ 157 NPKILMLDEATASLDSESESMVQKALDSLMKGRTTLV 193 (242)
T ss_dssp CCSEEEEECCSCSSCSSSCCHHHHHHHHHHTTSEEEE
T ss_pred CCCEEEecCCccccCHHHHHHHHHHHHHHcCCCEEEE
Confidence 4568999999888888777788877777754433333
No 98
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=75.76 E-value=2 Score=36.75 Aligned_cols=18 Identities=33% Similarity=0.484 Sum_probs=15.0
Q ss_pred CCCEEEEcCCCCCchhhh
Q 042373 158 GLDSVAITETGSGKTLAF 175 (494)
Q Consensus 158 grdvi~~a~TGSGKTlaf 175 (494)
|.=+++.|++|+|||...
T Consensus 26 G~~~~I~G~~G~GKT~la 43 (242)
T d1tf7a1 26 GRSTLVSGTSGTGKTLFS 43 (242)
T ss_dssp TSEEEEEESTTSSHHHHH
T ss_pred CeEEEEEeCCCCCHHHHH
Confidence 577899999999999643
No 99
>d1c4oa1 c.37.1.19 (A:2-409) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}
Probab=74.08 E-value=1.2 Score=43.62 Aligned_cols=59 Identities=27% Similarity=0.345 Sum_probs=38.0
Q ss_pred CCChhHHHHHHHHH----cCC-CEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhhhh
Q 042373 143 NPVAIQAPASALII----SGL-DSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQVR 213 (494)
Q Consensus 143 ~ptpiQ~~aip~il----~gr-dvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi~T 213 (494)
+|+.-|-+||..++ .|+ .+.+.+-+||+|++... .++... +..+|||+|+.+.|.+++.
T Consensus 8 ~p~~dqp~aI~~l~~~L~~g~~~~~L~GlsgS~ka~~~A-~l~~~~-----------~rp~LvVt~~~~~A~~l~~ 71 (408)
T d1c4oa1 8 SPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMA-KVIEAL-----------GRPALVLAPNKILAAQLAA 71 (408)
T ss_dssp CCCTTHHHHHHHHHHHHHTTCSEEEEEECTTSCHHHHHH-HHHHHH-----------TCCEEEEESSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhcCCCcEEEecCCCCHHHHHHH-HHHHHh-----------CCCEEEEeCCHHHHHHHHH
Confidence 34445555666654 444 57888999999985321 222222 2347999999999998743
No 100
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]}
Probab=73.97 E-value=0.7 Score=37.24 Aligned_cols=18 Identities=17% Similarity=0.161 Sum_probs=15.4
Q ss_pred CCCEEEEcCCCCCchhhh
Q 042373 158 GLDSVAITETGSGKTLAF 175 (494)
Q Consensus 158 grdvi~~a~TGSGKTlaf 175 (494)
.|+++++|+.|||||...
T Consensus 2 ~k~I~l~G~~GsGKSTva 19 (169)
T d1kaga_ 2 KRNIFLVGPMGAGKSTIG 19 (169)
T ss_dssp CCCEEEECCTTSCHHHHH
T ss_pred CCeEEEECCCCCCHHHHH
Confidence 478999999999999743
No 101
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=72.70 E-value=2.8 Score=36.48 Aligned_cols=17 Identities=29% Similarity=0.155 Sum_probs=14.7
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.=+.+++|+|+|||.
T Consensus 26 ~Gei~~l~G~NGsGKST 42 (200)
T d1sgwa_ 26 KGNVVNFHGPNGIGKTT 42 (200)
T ss_dssp TTCCEEEECCTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 46677899999999997
No 102
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=72.37 E-value=1.2 Score=42.72 Aligned_cols=17 Identities=47% Similarity=0.509 Sum_probs=14.9
Q ss_pred CCEEEEcCCCCCchhhh
Q 042373 159 LDSVAITETGSGKTLAF 175 (494)
Q Consensus 159 rdvi~~a~TGSGKTlaf 175 (494)
.++++++|||+|||...
T Consensus 69 ~niLfiGPTGvGKTElA 85 (364)
T d1um8a_ 69 SNILLIGPTGSGKTLMA 85 (364)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred cceeeeCCCCccHHHHH
Confidence 68999999999999744
No 103
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=70.93 E-value=0.56 Score=38.80 Aligned_cols=18 Identities=28% Similarity=0.333 Sum_probs=15.6
Q ss_pred HcCCCEEEEcCCCCCchh
Q 042373 156 ISGLDSVAITETGSGKTL 173 (494)
Q Consensus 156 l~grdvi~~a~TGSGKTl 173 (494)
|.|+=+++.+++|||||.
T Consensus 2 ~~g~iI~l~G~~GsGKST 19 (176)
T d1zp6a1 2 LGGNILLLSGHPGSGKST 19 (176)
T ss_dssp CTTEEEEEEECTTSCHHH
T ss_pred CCCeEEEEECCCCCCHHH
Confidence 457778899999999997
No 104
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=70.53 E-value=1.1 Score=39.89 Aligned_cols=16 Identities=31% Similarity=0.214 Sum_probs=13.8
Q ss_pred CCEEEEcCCCCCchhh
Q 042373 159 LDSVAITETGSGKTLA 174 (494)
Q Consensus 159 rdvi~~a~TGSGKTla 174 (494)
+.+|+.||+|||||..
T Consensus 33 ~~ilL~GpPGtGKT~l 48 (273)
T d1gvnb_ 33 TAFLLGGQPGSGKTSL 48 (273)
T ss_dssp EEEEEECCTTSCTHHH
T ss_pred EEEEEECCCCCCHHHH
Confidence 3589999999999974
No 105
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]}
Probab=70.09 E-value=1.9 Score=35.02 Aligned_cols=24 Identities=21% Similarity=0.290 Sum_probs=16.5
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHc
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWE 185 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~ 185 (494)
+.++++.|||||. ++--++.++..
T Consensus 5 i~itG~~GSGKTT-L~~~L~~~l~~ 28 (170)
T d1np6a_ 5 LAFAAWSGTGKTT-LLKKLIPALCA 28 (170)
T ss_dssp EEEECCTTSCHHH-HHHHHHHHHHH
T ss_pred EEEEcCCCCCHHH-HHHHHHHHHHH
Confidence 5678999999995 44445555443
No 106
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=69.71 E-value=9.1 Score=33.64 Aligned_cols=32 Identities=19% Similarity=0.386 Sum_probs=22.1
Q ss_pred HHHHcCCCEEEEcCCCCCchhhhHHHHHHHHHc
Q 042373 153 ALIISGLDSVAITETGSGKTLAFLLPMLRHIWE 185 (494)
Q Consensus 153 p~il~grdvi~~a~TGSGKTlafllpil~~l~~ 185 (494)
+-++.|.=+++.|++|+|||. |++-+..++..
T Consensus 24 ~G~~pg~~~~i~G~~G~GKS~-l~l~la~~ia~ 55 (274)
T d1nlfa_ 24 PNMVAGTVGALVSPGGAGKSM-LALQLAAQIAG 55 (274)
T ss_dssp TTEETTSEEEEEESTTSSHHH-HHHHHHHHHHT
T ss_pred CCccCCcEEEEEeCCCCCHHH-HHHHHHHHHHc
Confidence 444567778899999999995 44445555543
No 107
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=68.58 E-value=0.87 Score=36.81 Aligned_cols=13 Identities=38% Similarity=0.498 Sum_probs=11.7
Q ss_pred EEEEcCCCCCchh
Q 042373 161 SVAITETGSGKTL 173 (494)
Q Consensus 161 vi~~a~TGSGKTl 173 (494)
++++|++|||||.
T Consensus 5 Iii~G~pGsGKTT 17 (152)
T d1ly1a_ 5 ILTIGCPGSGKST 17 (152)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6788999999997
No 108
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]}
Probab=66.59 E-value=1.1 Score=36.96 Aligned_cols=17 Identities=29% Similarity=0.524 Sum_probs=14.6
Q ss_pred CCCEEEEcCCCCCchhh
Q 042373 158 GLDSVAITETGSGKTLA 174 (494)
Q Consensus 158 grdvi~~a~TGSGKTla 174 (494)
+.+++++|++|||||..
T Consensus 5 ~~~I~i~G~~GsGKTT~ 21 (174)
T d1y63a_ 5 GINILITGTPGTGKTSM 21 (174)
T ss_dssp SCEEEEECSTTSSHHHH
T ss_pred CCEEEEEeCCCCCHHHH
Confidence 45799999999999973
No 109
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]}
Probab=66.53 E-value=0.68 Score=38.21 Aligned_cols=15 Identities=20% Similarity=0.284 Sum_probs=13.8
Q ss_pred CCEEEEcCCCCCchh
Q 042373 159 LDSVAITETGSGKTL 173 (494)
Q Consensus 159 rdvi~~a~TGSGKTl 173 (494)
|.++++|++|||||.
T Consensus 8 K~I~i~G~~GsGKTT 22 (192)
T d1lw7a2 8 KTVAILGGESSGKSV 22 (192)
T ss_dssp EEEEEECCTTSHHHH
T ss_pred eEEEEECCCCCCHHH
Confidence 679999999999997
No 110
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]}
Probab=64.68 E-value=1.2 Score=36.95 Aligned_cols=17 Identities=35% Similarity=0.258 Sum_probs=14.7
Q ss_pred CCEEEEcCCCCCchhhh
Q 042373 159 LDSVAITETGSGKTLAF 175 (494)
Q Consensus 159 rdvi~~a~TGSGKTlaf 175 (494)
|+++++|+.|||||...
T Consensus 1 k~I~liG~~GsGKsTi~ 17 (161)
T d1viaa_ 1 KNIVFIGFMGSGKSTLA 17 (161)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CcEEEECCCCCCHHHHH
Confidence 67999999999999743
No 111
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]}
Probab=64.48 E-value=1.2 Score=36.23 Aligned_cols=15 Identities=20% Similarity=0.246 Sum_probs=12.7
Q ss_pred CEEEEcCCCCCchhh
Q 042373 160 DSVAITETGSGKTLA 174 (494)
Q Consensus 160 dvi~~a~TGSGKTla 174 (494)
=++++|++|||||..
T Consensus 4 lI~i~G~~GsGKTTv 18 (176)
T d2bdta1 4 LYIITGPAGVGKSTT 18 (176)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 378889999999974
No 112
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]}
Probab=64.35 E-value=1.2 Score=36.34 Aligned_cols=16 Identities=25% Similarity=0.260 Sum_probs=13.8
Q ss_pred CCEEEEcCCCCCchhh
Q 042373 159 LDSVAITETGSGKTLA 174 (494)
Q Consensus 159 rdvi~~a~TGSGKTla 174 (494)
..++++|+.|||||..
T Consensus 5 ~~I~i~G~pGsGKTTi 20 (173)
T d1rkba_ 5 PNILLTGTPGVGKTTL 20 (173)
T ss_dssp CCEEEECSTTSSHHHH
T ss_pred CEEEEECCCCCCHHHH
Confidence 4689999999999963
No 113
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.51 E-value=2.4 Score=39.63 Aligned_cols=25 Identities=28% Similarity=0.391 Sum_probs=19.2
Q ss_pred HHHHHHcCCCE--EEEcCCCCCchhhh
Q 042373 151 ASALIISGLDS--VAITETGSGKTLAF 175 (494)
Q Consensus 151 aip~il~grdv--i~~a~TGSGKTlaf 175 (494)
.+..++.|.|+ ++.|+||||||...
T Consensus 67 lv~~~l~G~n~~i~aYGqtgSGKTyT~ 93 (323)
T d1bg2a_ 67 IVKDVLEGYNGTIFAYGQTSSGKTHTM 93 (323)
T ss_dssp HHHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHcCCCcceeeecccCCCCceec
Confidence 35667889865 66699999999753
No 114
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=60.84 E-value=11 Score=34.12 Aligned_cols=24 Identities=25% Similarity=0.129 Sum_probs=18.6
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHH
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLR 181 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~ 181 (494)
|+=+.+.++.|||||...+..+..
T Consensus 60 g~i~e~~G~~~~GKT~l~l~~~~~ 83 (269)
T d1mo6a1 60 GRVIEIYGPESSGKTTVALHAVAN 83 (269)
T ss_dssp SSEEEEECSSSSSHHHHHHHHHHH
T ss_pred ceeEEEecCCCcHHHHHHHHHHHH
Confidence 677889999999999766554443
No 115
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]}
Probab=60.29 E-value=2.3 Score=40.31 Aligned_cols=23 Identities=30% Similarity=0.504 Sum_probs=18.0
Q ss_pred HHHHHcCCC--EEEEcCCCCCchhh
Q 042373 152 SALIISGLD--SVAITETGSGKTLA 174 (494)
Q Consensus 152 ip~il~grd--vi~~a~TGSGKTla 174 (494)
+..++.|.| +++.|+||||||..
T Consensus 72 v~~~l~G~n~ti~aYG~tgSGKT~T 96 (354)
T d1goja_ 72 VDDILNGYNGTVFAYGQTGAGKSYT 96 (354)
T ss_dssp HHHHTTTCCEEEEEECSTTSSHHHH
T ss_pred HHHhhccCceeEEecccCCCCccee
Confidence 456678987 46669999999965
No 116
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=59.36 E-value=1 Score=39.97 Aligned_cols=17 Identities=24% Similarity=0.387 Sum_probs=13.1
Q ss_pred cceEEEEEcccchhccc
Q 042373 232 TRVTYLVLDEADRMFDM 248 (494)
Q Consensus 232 ~~l~~lVlDEaD~ml~~ 248 (494)
.....+++||+|.+...
T Consensus 131 ~~~~~~iide~d~l~~~ 147 (287)
T d1w5sa2 131 NHYLLVILDEFQSMLSS 147 (287)
T ss_dssp TCEEEEEEESTHHHHSC
T ss_pred cCccccceeEEEEeccc
Confidence 45567899999998753
No 117
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=58.29 E-value=1.8 Score=40.28 Aligned_cols=18 Identities=22% Similarity=0.287 Sum_probs=15.8
Q ss_pred cCCCEEEEcCCCCCchhh
Q 042373 157 SGLDSVAITETGSGKTLA 174 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTla 174 (494)
.+.++|+.+++|+|||..
T Consensus 27 ~~h~vLl~G~pG~GKT~l 44 (333)
T d1g8pa_ 27 GIGGVLVFGDRGTGKSTA 44 (333)
T ss_dssp GGCCEEEECCGGGCTTHH
T ss_pred CCCeEEEECCCCccHHHH
Confidence 457999999999999974
No 118
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.62 E-value=1.8 Score=36.80 Aligned_cols=15 Identities=27% Similarity=0.315 Sum_probs=13.7
Q ss_pred CCEEEEcCCCCCchh
Q 042373 159 LDSVAITETGSGKTL 173 (494)
Q Consensus 159 rdvi~~a~TGSGKTl 173 (494)
|-++++||+|||||.
T Consensus 2 rpIvl~GpsG~GK~t 16 (186)
T d1gkya_ 2 RPIVISGPSGTGKST 16 (186)
T ss_dssp CCEEEECCTTSSHHH
T ss_pred CeEEEECCCCCCHHH
Confidence 568999999999997
No 119
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=57.33 E-value=3.8 Score=39.03 Aligned_cols=44 Identities=11% Similarity=-0.069 Sum_probs=27.9
Q ss_pred CCCCCCChhHHHHHHHHHcC----CCEEEEcCCCCCchhhhHHHHHHHH
Q 042373 139 LNHENPVAIQAPASALIISG----LDSVAITETGSGKTLAFLLPMLRHI 183 (494)
Q Consensus 139 ~g~~~ptpiQ~~aip~il~g----rdvi~~a~TGSGKTlafllpil~~l 183 (494)
.++.....+-..++-.++.| +.++++||+|+|||. +...+...+
T Consensus 131 ~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~g~~~~gk~~-~~~~~~~~~ 178 (362)
T d1svma_ 131 CLLPKMDSVVYDFLKCMVYNIPKKRYWLFKGPIDSGKTT-LAAALLELC 178 (362)
T ss_dssp TTSTTHHHHHHHHHHHHHHCCTTCCEEEEECSTTSSHHH-HHHHHHHHH
T ss_pred hcccchHHHHHHHHHHHHhCCCCcCeEEEECCCCCCHHH-HHHHHHHHc
Confidence 44555444444455555555 579999999999996 344455444
No 120
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]}
Probab=56.98 E-value=1.8 Score=35.30 Aligned_cols=19 Identities=11% Similarity=0.041 Sum_probs=14.9
Q ss_pred HcCCCEEEEcCCCCCchhh
Q 042373 156 ISGLDSVAITETGSGKTLA 174 (494)
Q Consensus 156 l~grdvi~~a~TGSGKTla 174 (494)
|+.|=++++|+.|||||..
T Consensus 1 M~~kiI~l~G~~GsGKsTv 19 (178)
T d1qhxa_ 1 MTTRMIILNGGSSAGKSGI 19 (178)
T ss_dssp CCCCEEEEECCTTSSHHHH
T ss_pred CCCeEEEEECCCCCCHHHH
Confidence 3456678889999999963
No 121
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=56.95 E-value=1.3 Score=37.54 Aligned_cols=39 Identities=33% Similarity=0.348 Sum_probs=27.5
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEEccchhHHHhh
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVMAPTGELVRQQ 211 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl~PTreLa~Qi 211 (494)
+++.++-|+|||. |.=-+++.+ |...-|-+||-.|++.-
T Consensus 36 i~L~G~LGaGKTt-fvr~~~~~l-----------g~~~~V~SPTF~l~~~Y 74 (158)
T d1htwa_ 36 VYLNGDLGAGKTT-LTRGMLQGI-----------GHQGNVKSPTYTLVEEY 74 (158)
T ss_dssp EEEECSTTSSHHH-HHHHHHHHT-----------TCCSCCCCCTTTCEEEE
T ss_pred EEEecCCCccHHH-HHHHHHhhc-----------ccccccCCCceEEEEee
Confidence 4567999999994 555566554 33334779999998764
No 122
>d1w36b1 c.37.1.19 (B:1-485) Exodeoxyribonuclease V beta chain (RecB), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=56.80 E-value=7.2 Score=37.01 Aligned_cols=53 Identities=17% Similarity=0.074 Sum_probs=34.3
Q ss_pred CCEEEEcCCCCCchhhhHHHHHHHHHcCCCCCCCCC---CCeEEEEccchhHHHhh
Q 042373 159 LDSVAITETGSGKTLAFLLPMLRHIWEQPPVVPGDD---SPVGLVMAPTGELVRQQ 211 (494)
Q Consensus 159 rdvi~~a~TGSGKTlafllpil~~l~~~~~~~~~~~---~p~aLIl~PTreLa~Qi 211 (494)
..+|+.|.-|||||.+.+-=++..+........... --..|+|+=|+.-|..+
T Consensus 17 g~~lv~A~AGsGKT~~l~~r~~~ll~~~~~~~~~~~~~~~~~IL~lTFT~kAA~Em 72 (485)
T d1w36b1 17 GERLIEASAGTGKTFTIAALYLRLLLGLGGSAAFPRPLTVEELLVVTFTEAATAEL 72 (485)
T ss_dssp SCEEEECCTTSCHHHHHHHHHHHHHTTCSSSSSCSSCCCGGGEEEEESCHHHHHHH
T ss_pred CCeEEEEcCchHHHHHHHHHHHHHHhhCcccccccCCCCcccEeEeccHHHHHHHH
Confidence 358999999999998777666666654321111110 12488888888766665
No 123
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]}
Probab=54.50 E-value=3.7 Score=38.69 Aligned_cols=25 Identities=24% Similarity=0.393 Sum_probs=19.0
Q ss_pred HHHHHHcCCCE--EEEcCCCCCchhhh
Q 042373 151 ASALIISGLDS--VAITETGSGKTLAF 175 (494)
Q Consensus 151 aip~il~grdv--i~~a~TGSGKTlaf 175 (494)
.+..++.|.|. ++.++||||||...
T Consensus 78 lv~~~l~G~n~ti~aYGqTgSGKT~Tm 104 (349)
T d2zfia1 78 MLQHAFEGYNVCIFAYGQTGAGKSYTM 104 (349)
T ss_dssp HHHHHHTTCCEEEEEECSTTSSHHHHH
T ss_pred HHHHHHhccCceeeeeccCCCCCceee
Confidence 35567889764 66699999999763
No 124
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.36 E-value=15 Score=29.70 Aligned_cols=20 Identities=35% Similarity=0.506 Sum_probs=15.6
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHc
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWE 185 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~ 185 (494)
++++|..|+|||. +++++..
T Consensus 8 i~lvG~~~vGKTs-----Li~~l~~ 27 (171)
T d2ew1a1 8 IVLIGNAGVGKTC-----LVRRFTQ 27 (171)
T ss_dssp EEEEESTTSSHHH-----HHHHHHH
T ss_pred EEEECCCCcCHHH-----HHHHHHh
Confidence 7899999999995 5555554
No 125
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Probab=53.92 E-value=1.2 Score=36.38 Aligned_cols=20 Identities=20% Similarity=0.142 Sum_probs=16.3
Q ss_pred HcCCCEEEEcCCCCCchhhh
Q 042373 156 ISGLDSVAITETGSGKTLAF 175 (494)
Q Consensus 156 l~grdvi~~a~TGSGKTlaf 175 (494)
..|.-++++|..|||||...
T Consensus 4 ~~g~~I~l~G~~GsGKTTia 23 (183)
T d1m8pa3 4 TQGFTIFLTGYMNSGKDAIA 23 (183)
T ss_dssp TCCEEEEEECSTTSSHHHHH
T ss_pred CCCeEEEEECCCCCCHHHHH
Confidence 45677889999999999753
No 126
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]}
Probab=53.83 E-value=2.3 Score=34.64 Aligned_cols=15 Identities=33% Similarity=0.401 Sum_probs=12.6
Q ss_pred EEEEcCCCCCchhhh
Q 042373 161 SVAITETGSGKTLAF 175 (494)
Q Consensus 161 vi~~a~TGSGKTlaf 175 (494)
++++|+.|||||...
T Consensus 9 ivl~G~~GsGKsT~a 23 (171)
T d1knqa_ 9 YVLMGVSGSGKSAVA 23 (171)
T ss_dssp EEEECSTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 677899999999744
No 127
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]}
Probab=53.57 E-value=5.8 Score=32.39 Aligned_cols=23 Identities=17% Similarity=0.112 Sum_probs=15.7
Q ss_pred EEEcCCCCCchhhhHHHHHHHHHc
Q 042373 162 VAITETGSGKTLAFLLPMLRHIWE 185 (494)
Q Consensus 162 i~~a~TGSGKTlafllpil~~l~~ 185 (494)
-+++..|||||. ++--++.++..
T Consensus 5 ~I~G~~gSGKTT-li~~l~~~L~~ 27 (165)
T d1xjca_ 5 QVVGYKHSGKTT-LMEKWVAAAVR 27 (165)
T ss_dssp EEECCTTSSHHH-HHHHHHHHHHH
T ss_pred EEEeCCCCCHHH-HHHHHHHHHHh
Confidence 378999999995 34445555543
No 128
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]}
Probab=53.32 E-value=3.8 Score=38.93 Aligned_cols=24 Identities=38% Similarity=0.457 Sum_probs=18.2
Q ss_pred HHHHHcCCCE--EEEcCCCCCchhhh
Q 042373 152 SALIISGLDS--VAITETGSGKTLAF 175 (494)
Q Consensus 152 ip~il~grdv--i~~a~TGSGKTlaf 175 (494)
+..++.|.|. ++.++||||||...
T Consensus 106 v~~~l~G~n~tifaYGqTGSGKTyTm 131 (362)
T d1v8ka_ 106 VQTIFEGGKATCFAYGQTGSGKTHTM 131 (362)
T ss_dssp HHHHHTTCEEEEEEEESTTSSHHHHH
T ss_pred HHHHHhccCceEEeeccCCCCCceee
Confidence 4567888765 55599999999763
No 129
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]}
Probab=53.12 E-value=3.2 Score=39.46 Aligned_cols=25 Identities=32% Similarity=0.477 Sum_probs=19.8
Q ss_pred HHHHHHcCCCE--EEEcCCCCCchhhh
Q 042373 151 ASALIISGLDS--VAITETGSGKTLAF 175 (494)
Q Consensus 151 aip~il~grdv--i~~a~TGSGKTlaf 175 (494)
.+..++.|.|. +..|+||||||...
T Consensus 66 lv~~~l~G~n~~i~aYGqTGSGKTyTm 92 (364)
T d1sdma_ 66 LVQSAVDGYNVCIFAYGQTGSGKTFTI 92 (364)
T ss_dssp HHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHhcCCceeeeccccCCCCccccc
Confidence 47788899865 55699999999764
No 130
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=52.68 E-value=3.3 Score=39.44 Aligned_cols=26 Identities=35% Similarity=0.514 Sum_probs=20.5
Q ss_pred HHHHHHHcCCCE--EEEcCCCCCchhhh
Q 042373 150 PASALIISGLDS--VAITETGSGKTLAF 175 (494)
Q Consensus 150 ~aip~il~grdv--i~~a~TGSGKTlaf 175 (494)
..+..++.|.|. +..|+||||||...
T Consensus 115 plv~~vl~G~n~ti~aYGqtGSGKT~Tm 142 (368)
T d2ncda_ 115 PLIQSALDGYNICIFAYGQTGSGKTYTM 142 (368)
T ss_dssp HHHHHHHTTCEEEEEEECSTTSSHHHHH
T ss_pred HHHHHHhcccceeEEeeccCCCccceEe
Confidence 467788999864 66699999999763
No 131
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]}
Probab=52.13 E-value=3.8 Score=38.51 Aligned_cols=24 Identities=33% Similarity=0.508 Sum_probs=18.6
Q ss_pred HHHHHHcCCCE--EEEcCCCCCchhh
Q 042373 151 ASALIISGLDS--VAITETGSGKTLA 174 (494)
Q Consensus 151 aip~il~grdv--i~~a~TGSGKTla 174 (494)
.+..++.|.++ +..++||||||..
T Consensus 72 lv~~~l~G~n~~i~aYGqtgSGKTyT 97 (345)
T d1x88a1 72 ILDEVIMGYNCTIFAYGQTGTGKTFT 97 (345)
T ss_dssp HHHHHHTTCEEEEEEEECTTSSHHHH
T ss_pred hHHHHhccCCceEEeeeeccccceEE
Confidence 45667889865 5669999999965
No 132
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.11 E-value=3.9 Score=33.82 Aligned_cols=24 Identities=21% Similarity=0.104 Sum_probs=16.9
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHHH
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLRH 182 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~~ 182 (494)
|+=+++.+++|||||.. ++-++.+
T Consensus 23 G~v~~i~G~~GsGKT~l-~l~la~~ 46 (242)
T d1n0wa_ 23 GSITEMFGEFRTGKTQI-CHTLAVT 46 (242)
T ss_dssp TSEEEEECCTTSSHHHH-HHHHHHH
T ss_pred CEEEEEEeCCCCCHHHH-HHHHHHH
Confidence 46788899999999963 3334433
No 133
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=51.05 E-value=2.7 Score=35.37 Aligned_cols=13 Identities=38% Similarity=0.532 Sum_probs=11.7
Q ss_pred EEEEcCCCCCchh
Q 042373 161 SVAITETGSGKTL 173 (494)
Q Consensus 161 vi~~a~TGSGKTl 173 (494)
+|++|++|||||.
T Consensus 17 iil~G~pGsGKST 29 (172)
T d1yj5a2 17 VVAVGFPGAGKST 29 (172)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6788999999996
No 134
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=50.74 E-value=3 Score=35.53 Aligned_cols=15 Identities=27% Similarity=0.315 Sum_probs=13.4
Q ss_pred CCEEEEcCCCCCchh
Q 042373 159 LDSVAITETGSGKTL 173 (494)
Q Consensus 159 rdvi~~a~TGSGKTl 173 (494)
|-++++||+|||||.
T Consensus 1 rpIvl~GPsGsGK~t 15 (190)
T d1lvga_ 1 RPVVLSGPSGAGKST 15 (190)
T ss_dssp CCEEEECCTTSSHHH
T ss_pred CeEEEECCCCCCHHH
Confidence 458999999999997
No 135
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Probab=49.95 E-value=2.9 Score=35.14 Aligned_cols=19 Identities=26% Similarity=0.405 Sum_probs=15.3
Q ss_pred CCCEEEEcCCCCCchhhhH
Q 042373 158 GLDSVAITETGSGKTLAFL 176 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafl 176 (494)
|--+++.||+|||||...-
T Consensus 3 ~~riil~G~pGSGKsT~a~ 21 (190)
T d1ak2a1 3 GVRAVLLGPPGAGKGTQAP 21 (190)
T ss_dssp CCEEEEECCTTSSHHHHHH
T ss_pred ccEEEEECCCCCCHHHHHH
Confidence 4568889999999997543
No 136
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]}
Probab=49.04 E-value=3.4 Score=34.22 Aligned_cols=18 Identities=17% Similarity=0.054 Sum_probs=14.9
Q ss_pred CCCEEEEcCCCCCchhhh
Q 042373 158 GLDSVAITETGSGKTLAF 175 (494)
Q Consensus 158 grdvi~~a~TGSGKTlaf 175 (494)
.+.++++|+.|||||...
T Consensus 2 ~~~Iil~G~~GsGKSTia 19 (170)
T d1e6ca_ 2 TEPIFMVGARGCGMTTVG 19 (170)
T ss_dssp CCCEEEESCTTSSHHHHH
T ss_pred CCCEEEECCCCCCHHHHH
Confidence 367899999999998744
No 137
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]}
Probab=48.05 E-value=3.1 Score=35.04 Aligned_cols=16 Identities=19% Similarity=0.140 Sum_probs=13.5
Q ss_pred CEEEEcCCCCCchhhh
Q 042373 160 DSVAITETGSGKTLAF 175 (494)
Q Consensus 160 dvi~~a~TGSGKTlaf 175 (494)
.+++.||+|||||...
T Consensus 5 ~I~i~GppGsGKsT~a 20 (189)
T d1zaka1 5 KVMISGAPASGKGTQC 20 (189)
T ss_dssp CEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4789999999998744
No 138
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId: 562]}
Probab=47.29 E-value=3.5 Score=35.81 Aligned_cols=17 Identities=24% Similarity=0.384 Sum_probs=14.9
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
+|+=++++||+|+|||.
T Consensus 1 ~G~livi~GPSG~GK~t 17 (205)
T d1s96a_ 1 QGTLYIVSAPSGAGKSS 17 (205)
T ss_dssp CCCEEEEECCTTSCHHH
T ss_pred CCeEEEEECCCCCCHHH
Confidence 46778999999999997
No 139
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]}
Probab=47.20 E-value=3.9 Score=38.43 Aligned_cols=25 Identities=32% Similarity=0.468 Sum_probs=19.5
Q ss_pred HHHHHHcCCCE--EEEcCCCCCchhhh
Q 042373 151 ASALIISGLDS--VAITETGSGKTLAF 175 (494)
Q Consensus 151 aip~il~grdv--i~~a~TGSGKTlaf 175 (494)
.+..++.|.|. +..++||||||...
T Consensus 74 ~v~~~l~G~n~~i~aYGqtgSGKT~T~ 100 (342)
T d1f9va_ 74 LVQSSLDGYNVCIFAYGQTGSGKTFTM 100 (342)
T ss_dssp HHGGGGGTCCEEEEEECCTTSSHHHHH
T ss_pred hhcchhcccccceeeeeccCCcccccc
Confidence 55667889865 55699999999765
No 140
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}
Probab=47.07 E-value=5.4 Score=37.14 Aligned_cols=19 Identities=42% Similarity=0.552 Sum_probs=15.0
Q ss_pred cCCCE--EEEcCCCCCchhhh
Q 042373 157 SGLDS--VAITETGSGKTLAF 175 (494)
Q Consensus 157 ~grdv--i~~a~TGSGKTlaf 175 (494)
.|.++ ++.++||||||...
T Consensus 82 ~G~n~~i~aYGqTGSGKTyTm 102 (330)
T d1ry6a_ 82 NGCVCSCFAYGQTGSGKTYTM 102 (330)
T ss_dssp HCCEEEEEEECCTTSSHHHHH
T ss_pred cCCCeEEEeeeccccccceee
Confidence 58774 66699999999764
No 141
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=46.38 E-value=3.8 Score=35.08 Aligned_cols=16 Identities=25% Similarity=0.223 Sum_probs=14.1
Q ss_pred CCCEEEEcCCCCCchh
Q 042373 158 GLDSVAITETGSGKTL 173 (494)
Q Consensus 158 grdvi~~a~TGSGKTl 173 (494)
|+-+++.+++|||||.
T Consensus 34 G~~~li~G~pGsGKT~ 49 (251)
T d1szpa2 34 GSITELFGEFRTGKSQ 49 (251)
T ss_dssp SSEEEEEESTTSSHHH
T ss_pred CeEEEEEcCCCCCHHH
Confidence 4678999999999996
No 142
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=45.82 E-value=3.9 Score=34.23 Aligned_cols=17 Identities=24% Similarity=0.206 Sum_probs=14.6
Q ss_pred CCCEEEEcCCCCCchhh
Q 042373 158 GLDSVAITETGSGKTLA 174 (494)
Q Consensus 158 grdvi~~a~TGSGKTla 174 (494)
|+=++++||+|||||..
T Consensus 2 G~iivl~GpsG~GK~tl 18 (182)
T d1znwa1 2 GRVVVLSGPSAVGKSTV 18 (182)
T ss_dssp CCEEEEECSTTSSHHHH
T ss_pred CeEEEEECCCCCCHHHH
Confidence 66689999999999973
No 143
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia coli [TaxId: 562]}
Probab=45.63 E-value=3.5 Score=34.22 Aligned_cols=16 Identities=13% Similarity=0.092 Sum_probs=13.4
Q ss_pred CEEEEcCCCCCchhhh
Q 042373 160 DSVAITETGSGKTLAF 175 (494)
Q Consensus 160 dvi~~a~TGSGKTlaf 175 (494)
.+++.+++|||||...
T Consensus 2 ~I~i~G~pGSGKsT~~ 17 (179)
T d1e4va1 2 RIILLGAPVAGKGTQA 17 (179)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4788999999999754
No 144
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=45.15 E-value=3.7 Score=33.93 Aligned_cols=16 Identities=25% Similarity=0.285 Sum_probs=13.6
Q ss_pred CEEEEcCCCCCchhhh
Q 042373 160 DSVAITETGSGKTLAF 175 (494)
Q Consensus 160 dvi~~a~TGSGKTlaf 175 (494)
.+++.|++|||||...
T Consensus 2 ~I~i~G~pGSGKsT~a 17 (182)
T d1zina1 2 NLVLMGLPGAGKGTQA 17 (182)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3789999999999754
No 145
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=44.87 E-value=3.5 Score=34.35 Aligned_cols=17 Identities=18% Similarity=0.296 Sum_probs=14.0
Q ss_pred CEEEEcCCCCCchhhhH
Q 042373 160 DSVAITETGSGKTLAFL 176 (494)
Q Consensus 160 dvi~~a~TGSGKTlafl 176 (494)
++++.|+.|||||...-
T Consensus 2 ~I~i~G~pGsGKsT~a~ 18 (181)
T d2cdna1 2 RVLLLGPPGAGKGTQAV 18 (181)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 47899999999997443
No 146
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=44.75 E-value=3.7 Score=34.64 Aligned_cols=14 Identities=21% Similarity=0.342 Sum_probs=11.9
Q ss_pred EEEEcCCCCCchhh
Q 042373 161 SVAITETGSGKTLA 174 (494)
Q Consensus 161 vi~~a~TGSGKTla 174 (494)
+++.||+|||||..
T Consensus 11 I~i~GppGSGKsT~ 24 (196)
T d1ukza_ 11 IFVLGGPGAGKGTQ 24 (196)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 67789999999863
No 147
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955 {Pyrococcus abyssi [TaxId: 29292]}
Probab=44.61 E-value=8.6 Score=32.85 Aligned_cols=22 Identities=32% Similarity=0.315 Sum_probs=15.3
Q ss_pred EEEEcCCCCCchhhhHHHHHHHH
Q 042373 161 SVAITETGSGKTLAFLLPMLRHI 183 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l 183 (494)
+++.++.|||||. ++--++++.
T Consensus 3 i~v~G~~GsGKTT-Ll~~ll~~~ 24 (244)
T d1yrba1 3 VVFVGTAGSGKTT-LTGEFGRYL 24 (244)
T ss_dssp EEEECSTTSSHHH-HHHHHHHHH
T ss_pred EEEEcCCCCcHHH-HHHHHHHHH
Confidence 5678999999995 344455444
No 148
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=44.52 E-value=14 Score=33.28 Aligned_cols=23 Identities=22% Similarity=0.088 Sum_probs=16.7
Q ss_pred CCCEEEEcCCCCCchhhhHHHHH
Q 042373 158 GLDSVAITETGSGKTLAFLLPML 180 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil 180 (494)
|+=+.+.++.|||||...+.-+.
T Consensus 57 g~itei~G~~~sGKT~l~l~~~~ 79 (268)
T d1xp8a1 57 GRITEIYGPESGGKTTLALAIVA 79 (268)
T ss_dssp TSEEEEEESTTSSHHHHHHHHHH
T ss_pred ceEEEEecCCccchHHHHHHHHH
Confidence 46677889999999975544333
No 149
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus globisporus [TaxId: 1459]}
Probab=43.99 E-value=3.9 Score=34.10 Aligned_cols=15 Identities=27% Similarity=0.262 Sum_probs=13.0
Q ss_pred EEEEcCCCCCchhhh
Q 042373 161 SVAITETGSGKTLAF 175 (494)
Q Consensus 161 vi~~a~TGSGKTlaf 175 (494)
+++.+++|||||...
T Consensus 3 I~i~G~pGSGKsT~a 17 (182)
T d1s3ga1 3 IVLMGLPGAGKGTQA 17 (182)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 788999999999744
No 150
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=43.87 E-value=5 Score=34.69 Aligned_cols=24 Identities=25% Similarity=0.166 Sum_probs=17.1
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHHH
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLRH 182 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~~ 182 (494)
|+=+++.+++|||||. |.+-++.+
T Consensus 36 G~~~li~G~pGsGKT~-~~lq~~~~ 59 (254)
T d1pzna2 36 QAITEVFGEFGSGKTQ-LAHTLAVM 59 (254)
T ss_dssp SEEEEEEESTTSSHHH-HHHHHHHH
T ss_pred CEEEEEEcCCCCCHHH-HHHHHHHH
Confidence 4678899999999996 33334433
No 151
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=43.58 E-value=4.1 Score=33.17 Aligned_cols=15 Identities=27% Similarity=0.169 Sum_probs=12.5
Q ss_pred CCEEEEcCCCCCchh
Q 042373 159 LDSVAITETGSGKTL 173 (494)
Q Consensus 159 rdvi~~a~TGSGKTl 173 (494)
|=+++.|++|||||.
T Consensus 2 kiI~i~G~~GsGKsT 16 (190)
T d1khta_ 2 KVVVVTGVPGVGSTT 16 (190)
T ss_dssp CEEEEECCTTSCHHH
T ss_pred CEEEEECCCCCCHHH
Confidence 346788999999996
No 152
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]}
Probab=43.48 E-value=4.1 Score=34.21 Aligned_cols=14 Identities=29% Similarity=0.387 Sum_probs=12.1
Q ss_pred EEEEcCCCCCchhh
Q 042373 161 SVAITETGSGKTLA 174 (494)
Q Consensus 161 vi~~a~TGSGKTla 174 (494)
++++||.|||||..
T Consensus 9 I~i~G~pGSGKsT~ 22 (194)
T d1qf9a_ 9 VFVLGGPGSGKGTQ 22 (194)
T ss_dssp EEEEESTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 67789999999974
No 153
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=42.49 E-value=9.9 Score=30.80 Aligned_cols=14 Identities=21% Similarity=0.359 Sum_probs=11.5
Q ss_pred EEEEcCCCCCchhh
Q 042373 161 SVAITETGSGKTLA 174 (494)
Q Consensus 161 vi~~a~TGSGKTla 174 (494)
+++.|+.|||||..
T Consensus 4 ivi~G~~GsGKTT~ 17 (194)
T d1nksa_ 4 GIVTGIPGVGKSTV 17 (194)
T ss_dssp EEEEECTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 46789999999963
No 154
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.44 E-value=4.2 Score=33.90 Aligned_cols=16 Identities=31% Similarity=0.326 Sum_probs=13.2
Q ss_pred CEEEEcCCCCCchhhh
Q 042373 160 DSVAITETGSGKTLAF 175 (494)
Q Consensus 160 dvi~~a~TGSGKTlaf 175 (494)
-+++.|+.|||||...
T Consensus 4 rIvl~G~pGSGKtT~a 19 (180)
T d1akya1 4 RMVLIGPPGAGKGTQA 19 (180)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3788899999999744
No 155
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.68 E-value=4.8 Score=33.92 Aligned_cols=23 Identities=13% Similarity=0.183 Sum_probs=17.3
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHHHHHc
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLRHIWE 185 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~~l~~ 185 (494)
.|-++++||+|+|||. ++.++..
T Consensus 3 ~k~ivl~Gpsg~GK~t-----l~~~L~~ 25 (178)
T d1kgda_ 3 RKTLVLLGAHGVGRRH-----IKNTLIT 25 (178)
T ss_dssp CCEEEEECCTTSSHHH-----HHHHHHH
T ss_pred CCcEEEECCCCCCHHH-----HHHHHHH
Confidence 4568999999999997 3455543
No 156
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=41.64 E-value=4.2 Score=37.74 Aligned_cols=23 Identities=26% Similarity=0.205 Sum_probs=16.8
Q ss_pred CEEEEcCCCCCchhhhHHHHHHHHH
Q 042373 160 DSVAITETGSGKTLAFLLPMLRHIW 184 (494)
Q Consensus 160 dvi~~a~TGSGKTlafllpil~~l~ 184 (494)
.+++++|||+|||...- .|..++
T Consensus 54 ~~lf~Gp~GvGKT~lak--~la~~l 76 (315)
T d1r6bx3 54 SFLFAGPTGVGKTEVTV--QLSKAL 76 (315)
T ss_dssp EEEEECSTTSSHHHHHH--HHHHHH
T ss_pred EEEEECCCcchhHHHHH--HHHhhc
Confidence 58999999999996443 344444
No 157
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=41.01 E-value=5.3 Score=33.62 Aligned_cols=20 Identities=20% Similarity=0.185 Sum_probs=15.7
Q ss_pred HHcCCCEEEEcCCCCCchhh
Q 042373 155 IISGLDSVAITETGSGKTLA 174 (494)
Q Consensus 155 il~grdvi~~a~TGSGKTla 174 (494)
+..++=+++.||+|||||..
T Consensus 5 ~~~~~iI~l~G~pGSGKsT~ 24 (194)
T d3adka_ 5 LKKSKIIFVVGGPGSGKGTQ 24 (194)
T ss_dssp HHTSCEEEEEECTTSSHHHH
T ss_pred ccCCcEEEEECCCCCCHHHH
Confidence 34456688899999999973
No 158
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=40.96 E-value=12 Score=32.58 Aligned_cols=21 Identities=38% Similarity=0.593 Sum_probs=15.6
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHcC
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWEQ 186 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~~ 186 (494)
+|+.+.-|||||. ++.+++..
T Consensus 6 ~iitGFLGaGKTT-----ll~~lL~~ 26 (222)
T d1nija1 6 TLLTGFLGAGKTT-----LLRHILNE 26 (222)
T ss_dssp EEEEESSSSSCHH-----HHHHHHHS
T ss_pred EEEeeCCCCCHHH-----HHHHHHhc
Confidence 4778999999996 45666554
No 159
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.96 E-value=2.3 Score=35.43 Aligned_cols=18 Identities=28% Similarity=0.248 Sum_probs=14.0
Q ss_pred CCCEEEEcCCCCCchhhh
Q 042373 158 GLDSVAITETGSGKTLAF 175 (494)
Q Consensus 158 grdvi~~a~TGSGKTlaf 175 (494)
|.-++++|++|||||...
T Consensus 19 g~vI~L~G~pGSGKTTiA 36 (195)
T d1x6va3 19 GCTVWLTGLSGAGKTTVS 36 (195)
T ss_dssp CEEEEEESSCHHHHHHHH
T ss_pred CeEEEEECCCCCCHHHHH
Confidence 445678899999999743
No 160
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Probab=40.92 E-value=4.6 Score=34.29 Aligned_cols=16 Identities=25% Similarity=0.316 Sum_probs=13.7
Q ss_pred CEEEEcCCCCCchhhh
Q 042373 160 DSVAITETGSGKTLAF 175 (494)
Q Consensus 160 dvi~~a~TGSGKTlaf 175 (494)
.+++++++|||||...
T Consensus 8 rIiliG~PGSGKtT~a 23 (189)
T d2ak3a1 8 RAAIMGAPGSGKGTVS 23 (189)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 6889999999999744
No 161
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=40.72 E-value=4.9 Score=33.71 Aligned_cols=15 Identities=27% Similarity=0.206 Sum_probs=12.6
Q ss_pred EEEEcCCCCCchhhh
Q 042373 161 SVAITETGSGKTLAF 175 (494)
Q Consensus 161 vi~~a~TGSGKTlaf 175 (494)
++++|.+|||||..+
T Consensus 5 i~l~GlpgsGKSTla 19 (213)
T d1bifa1 5 IVMVGLPARGKTYIS 19 (213)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 577899999999755
No 162
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=40.37 E-value=5.2 Score=32.74 Aligned_cols=16 Identities=31% Similarity=0.333 Sum_probs=13.5
Q ss_pred CEEEEcCCCCCchhhh
Q 042373 160 DSVAITETGSGKTLAF 175 (494)
Q Consensus 160 dvi~~a~TGSGKTlaf 175 (494)
.++++|+.|+|||...
T Consensus 3 ~IvliG~~G~GKSTig 18 (165)
T d2iyva1 3 KAVLVGLPGSGKSTIG 18 (165)
T ss_dssp SEEEECSTTSSHHHHH
T ss_pred cEEEECCCCCCHHHHH
Confidence 4788999999999744
No 163
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis [TaxId: 1423]}
Probab=40.13 E-value=68 Score=25.93 Aligned_cols=13 Identities=15% Similarity=0.148 Sum_probs=12.0
Q ss_pred EEEEcCCCCCchh
Q 042373 161 SVAITETGSGKTL 173 (494)
Q Consensus 161 vi~~a~TGSGKTl 173 (494)
+.++|+||+|||.
T Consensus 26 I~lvG~~n~GKST 38 (195)
T d1svia_ 26 IALAGRSNVGKSS 38 (195)
T ss_dssp EEEEEBTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 8899999999995
No 164
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54 (NtrC1), C-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=39.10 E-value=7.8 Score=34.46 Aligned_cols=19 Identities=21% Similarity=0.277 Sum_probs=16.1
Q ss_pred HHcCCCEEEEcCCCCCchh
Q 042373 155 IISGLDSVAITETGSGKTL 173 (494)
Q Consensus 155 il~grdvi~~a~TGSGKTl 173 (494)
......|++.|++|||||.
T Consensus 20 a~~~~pvlI~Ge~GtGK~~ 38 (247)
T d1ny5a2 20 SCAECPVLITGESGVGKEV 38 (247)
T ss_dssp TTCCSCEEEECSTTSSHHH
T ss_pred hCCCCCEEEECCCCcCHHH
Confidence 3456789999999999996
No 165
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.36 E-value=5.3 Score=33.39 Aligned_cols=15 Identities=20% Similarity=0.319 Sum_probs=12.6
Q ss_pred EEEEcCCCCCchhhh
Q 042373 161 SVAITETGSGKTLAF 175 (494)
Q Consensus 161 vi~~a~TGSGKTlaf 175 (494)
+++.+|+|||||...
T Consensus 4 I~i~GppGSGKsT~a 18 (194)
T d1teva_ 4 VFVLGGPGAGKGTQC 18 (194)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 578899999999754
No 166
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=38.02 E-value=24 Score=30.92 Aligned_cols=29 Identities=10% Similarity=-0.054 Sum_probs=19.0
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHHHHHcC
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLRHIWEQ 186 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~~l~~~ 186 (494)
++-+|+.||..+|||..--.-.+..++.+
T Consensus 41 ~~~~iiTGpN~~GKSt~lk~i~l~~~laq 69 (234)
T d1wb9a2 41 RRMLIITGPNMGGKSTYMRQTALIALMAY 69 (234)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHHHHHHT
T ss_pred ceEEEEeccCchhhHHHHHHHHHHHHHHH
Confidence 45688999999999964433333344443
No 167
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=36.52 E-value=6.2 Score=32.48 Aligned_cols=15 Identities=27% Similarity=-0.002 Sum_probs=11.6
Q ss_pred CCEE-EEcCCCCCchh
Q 042373 159 LDSV-AITETGSGKTL 173 (494)
Q Consensus 159 rdvi-~~a~TGSGKTl 173 (494)
+=+| +.|++|||||.
T Consensus 22 ~~iIgI~G~~GSGKST 37 (198)
T d1rz3a_ 22 RLVLGIDGLSRSGKTT 37 (198)
T ss_dssp SEEEEEEECTTSSHHH
T ss_pred CEEEEEECCCCCCHHH
Confidence 3345 67999999996
No 168
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=35.91 E-value=13 Score=31.00 Aligned_cols=33 Identities=18% Similarity=0.007 Sum_probs=19.9
Q ss_pred CEEEEcC-CCCCchhhhHHHHHHHHHcCCCCCCCCCCCeEEEE
Q 042373 160 DSVAITE-TGSGKTLAFLLPMLRHIWEQPPVVPGDDSPVGLVM 201 (494)
Q Consensus 160 dvi~~a~-TGSGKTlafllpil~~l~~~~~~~~~~~~p~aLIl 201 (494)
.+++++- ||.|||..-+. +...+..+ |.+++++
T Consensus 3 ~~~i~gt~~GVGKTtvs~~-La~aLa~~--------G~rVl~i 36 (224)
T d1byia_ 3 RYFVTGTDTEVGKTVASCA-LLQAAKAA--------GYRTAGY 36 (224)
T ss_dssp EEEEEESSTTSCHHHHHHH-HHHHHHHT--------TCCEEEE
T ss_pred eEEEEECCCCccHHHHHHH-HHHHHHHC--------CCeEEEE
Confidence 4566666 69999975543 33333332 5567776
No 169
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.19 E-value=6.3 Score=33.89 Aligned_cols=18 Identities=28% Similarity=0.040 Sum_probs=15.0
Q ss_pred CCCEEEEcCCCCCchhhh
Q 042373 158 GLDSVAITETGSGKTLAF 175 (494)
Q Consensus 158 grdvi~~a~TGSGKTlaf 175 (494)
|+-+++.+++|+|||...
T Consensus 37 G~~~~i~G~~GsGKT~la 54 (258)
T d1v5wa_ 37 MAITEAFGEFRTGKTQLS 54 (258)
T ss_dssp SEEEEEECCTTCTHHHHH
T ss_pred CEEEEEECCCCCCHHHHH
Confidence 467889999999999643
No 170
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.69 E-value=17 Score=29.49 Aligned_cols=20 Identities=30% Similarity=0.456 Sum_probs=15.5
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHc
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWE 185 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~ 185 (494)
++++|..|+|||. +++++..
T Consensus 7 i~vvG~~~vGKTs-----Li~~~~~ 26 (175)
T d2f9la1 7 VVLIGDSGVGKSN-----LLSRFTR 26 (175)
T ss_dssp EEEESSTTSSHHH-----HHHHHHH
T ss_pred EEEECCCCcCHHH-----HHHHHHh
Confidence 7899999999996 4555544
No 171
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=34.67 E-value=6.6 Score=35.60 Aligned_cols=14 Identities=29% Similarity=0.468 Sum_probs=12.0
Q ss_pred EEEEcCCCCCchhh
Q 042373 161 SVAITETGSGKTLA 174 (494)
Q Consensus 161 vi~~a~TGSGKTla 174 (494)
.+++|++|||||..
T Consensus 29 nvi~G~NGsGKS~i 42 (329)
T g1xew.1 29 TAIVGANGSGKSNI 42 (329)
T ss_dssp EEEEECTTSSSHHH
T ss_pred EEEECCCCCCHHHH
Confidence 37899999999973
No 172
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=33.30 E-value=19 Score=32.23 Aligned_cols=25 Identities=24% Similarity=0.072 Sum_probs=18.4
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHHH
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLRH 182 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~~ 182 (494)
|+=+.+.+++|||||...+.-+...
T Consensus 54 g~itei~G~~gsGKTtl~l~~~~~~ 78 (263)
T d1u94a1 54 GRIVEIYGPESSGKTTLTLQVIAAA 78 (263)
T ss_dssp TSEEEEECSTTSSHHHHHHHHHHHH
T ss_pred ceEEEEecCCCcHHHHHHHHHHHHH
Confidence 3678889999999997655444443
No 173
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=33.07 E-value=7.4 Score=34.55 Aligned_cols=15 Identities=33% Similarity=0.574 Sum_probs=12.4
Q ss_pred EEEEcCCCCCchhhh
Q 042373 161 SVAITETGSGKTLAF 175 (494)
Q Consensus 161 vi~~a~TGSGKTlaf 175 (494)
.+++|++|||||..+
T Consensus 26 ~vi~G~NgsGKTtil 40 (369)
T g1ii8.1 26 NLIIGQNGSGKSSLL 40 (369)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 577899999999743
No 174
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=32.94 E-value=7.7 Score=32.74 Aligned_cols=22 Identities=23% Similarity=0.285 Sum_probs=17.7
Q ss_pred CCEEEEcCCCCCchhhhHHHHHHHHHc
Q 042373 159 LDSVAITETGSGKTLAFLLPMLRHIWE 185 (494)
Q Consensus 159 rdvi~~a~TGSGKTlafllpil~~l~~ 185 (494)
|+|+++|+.|+|||. ++.++..
T Consensus 1 k~V~ivG~~~~GKTs-----Ll~~l~~ 22 (207)
T d2fh5b1 1 RAVLFVGLCDSGKTL-----LFVRLLT 22 (207)
T ss_dssp CEEEEECSTTSSHHH-----HHHHHHH
T ss_pred CEEEEECCCCCCHHH-----HHHHHHc
Confidence 679999999999996 4555554
No 175
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.91 E-value=9 Score=34.32 Aligned_cols=17 Identities=29% Similarity=0.442 Sum_probs=15.1
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.-+.+++++|||||.
T Consensus 39 ~Ge~vaivG~sGsGKST 55 (251)
T d1jj7a_ 39 PGEVTALVGPNGSGKST 55 (251)
T ss_dssp TTCEEEEECSTTSSHHH
T ss_pred CCCEEEEECCCCCcHHH
Confidence 47788999999999997
No 176
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.04 E-value=7.8 Score=36.11 Aligned_cols=15 Identities=33% Similarity=0.459 Sum_probs=0.0
Q ss_pred EEEEcCCCCCchhhh
Q 042373 161 SVAITETGSGKTLAF 175 (494)
Q Consensus 161 vi~~a~TGSGKTlaf 175 (494)
.+++|++|||||..+
T Consensus 28 ~~i~G~NGsGKS~il 42 (427)
T d1w1wa_ 28 TSIIGPNGSGKSNMM 42 (427)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
No 177
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.83 E-value=55 Score=25.96 Aligned_cols=20 Identities=30% Similarity=0.547 Sum_probs=15.8
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHc
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWE 185 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~ 185 (494)
++++|..|+|||. ++.++..
T Consensus 8 I~lvG~~~vGKTs-----ll~~~~~ 27 (174)
T d2bmea1 8 FLVIGNAGTGKSC-----LLHQFIE 27 (174)
T ss_dssp EEEEESTTSSHHH-----HHHHHHH
T ss_pred EEEECCCCcCHHH-----HHHHHHh
Confidence 7899999999995 5555554
No 178
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.42 E-value=8.3 Score=32.71 Aligned_cols=11 Identities=36% Similarity=0.329 Sum_probs=9.6
Q ss_pred EEcCCCCCchh
Q 042373 163 AITETGSGKTL 173 (494)
Q Consensus 163 ~~a~TGSGKTl 173 (494)
+.|++|||||.
T Consensus 7 I~G~~gSGKST 17 (213)
T d1uj2a_ 7 VSGGTASGKSS 17 (213)
T ss_dssp EECSTTSSHHH
T ss_pred EECCCCCCHHH
Confidence 56999999995
No 179
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=31.40 E-value=11 Score=31.95 Aligned_cols=25 Identities=20% Similarity=0.053 Sum_probs=17.4
Q ss_pred CCCEEEEcCCCCCchhhhHHHHHHHH
Q 042373 158 GLDSVAITETGSGKTLAFLLPMLRHI 183 (494)
Q Consensus 158 grdvi~~a~TGSGKTlafllpil~~l 183 (494)
|+=+++.|++|+|||.. ++-++.++
T Consensus 34 G~l~~i~G~~G~GKT~~-~l~~a~~~ 58 (258)
T d2i1qa2 34 QSVTEFAGVFGSGKTQI-MHQSCVNL 58 (258)
T ss_dssp TEEEEEEESTTSSHHHH-HHHHHHHT
T ss_pred CeEEEEEeCCCCCHHHH-HHHHHHHH
Confidence 46778889999999964 34344333
No 180
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli [TaxId: 562]}
Probab=29.93 E-value=3.6 Score=33.71 Aligned_cols=21 Identities=14% Similarity=0.202 Sum_probs=13.9
Q ss_pred EEEcCCCCCchhhhHHHHHHHHH
Q 042373 162 VAITETGSGKTLAFLLPMLRHIW 184 (494)
Q Consensus 162 i~~a~TGSGKTlafllpil~~l~ 184 (494)
+++|++|||||. ++=+|..++
T Consensus 28 vi~G~NGsGKSt--il~Ai~~~L 48 (222)
T d1qhla_ 28 TLSGGNGAGKST--TMAAFVTAL 48 (222)
T ss_dssp HHHSCCSHHHHH--HHHHHHHHH
T ss_pred EEECCCCCCHHH--HHHHHHHHh
Confidence 457899999996 333444443
No 181
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.02 E-value=91 Score=24.16 Aligned_cols=21 Identities=24% Similarity=0.289 Sum_probs=16.0
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHcC
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWEQ 186 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~~ 186 (494)
++++|..|+|||. ++.++...
T Consensus 3 v~vvG~~~vGKTs-----Li~r~~~~ 23 (164)
T d1yzqa1 3 LVFLGEQSVGKTS-----LITRFMYD 23 (164)
T ss_dssp EEEEESTTSSHHH-----HHHHHHHS
T ss_pred EEEECCCCcCHHH-----HHHHHHhC
Confidence 6889999999995 55555543
No 182
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=28.86 E-value=9.7 Score=33.26 Aligned_cols=15 Identities=33% Similarity=0.574 Sum_probs=0.0
Q ss_pred EEEEcCCCCCchhhh
Q 042373 161 SVAITETGSGKTLAF 175 (494)
Q Consensus 161 vi~~a~TGSGKTlaf 175 (494)
.+++|++|||||...
T Consensus 26 n~IvG~NGsGKStiL 40 (292)
T g1f2t.1 26 NLIIGQNGSGKSSLL 40 (292)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
No 183
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=27.14 E-value=11 Score=33.32 Aligned_cols=17 Identities=29% Similarity=0.352 Sum_probs=14.6
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.-+.+++|+|||||.
T Consensus 30 ~Ge~~~iiG~sGsGKST 46 (230)
T d1l2ta_ 30 EGEFVSIMGPSGSGKST 46 (230)
T ss_dssp TTCEEEEECSTTSSHHH
T ss_pred CCCEEEEECCCCCCcch
Confidence 46678889999999996
No 184
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima [TaxId: 2336]}
Probab=26.32 E-value=12 Score=33.29 Aligned_cols=15 Identities=27% Similarity=0.448 Sum_probs=0.0
Q ss_pred EEEEcCCCCCchhhh
Q 042373 161 SVAITETGSGKTLAF 175 (494)
Q Consensus 161 vi~~a~TGSGKTlaf 175 (494)
.+++|++|||||...
T Consensus 27 nvlvG~NgsGKS~iL 41 (308)
T d1e69a_ 27 TAIVGPNGSGKSNII 41 (308)
T ss_dssp EEEECCTTTCSTHHH
T ss_pred EEEECCCCCcHHHHH
No 185
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.87 E-value=12 Score=30.49 Aligned_cols=17 Identities=24% Similarity=0.493 Sum_probs=14.6
Q ss_pred cCCC----EEEEcCCCCCchh
Q 042373 157 SGLD----SVAITETGSGKTL 173 (494)
Q Consensus 157 ~grd----vi~~a~TGSGKTl 173 (494)
+|++ ++++|..|+|||.
T Consensus 1 ~~~~~~~KI~vvG~~~vGKSS 21 (174)
T d1wmsa_ 1 AGKSSLFKVILLGDGGVGKSS 21 (174)
T ss_dssp CCCEEEEEEEEECCTTSSHHH
T ss_pred CCCCceEEEEEECCCCCCHHH
Confidence 4677 8899999999995
No 186
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.67 E-value=14 Score=33.52 Aligned_cols=17 Identities=41% Similarity=0.356 Sum_probs=14.4
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.-+.+++|+|||||.
T Consensus 61 ~Ge~vaivG~nGsGKST 77 (281)
T d1r0wa_ 61 KGEMLAITGSTGSGKTS 77 (281)
T ss_dssp TTCEEEEEESTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 45667889999999996
No 187
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Probab=25.34 E-value=12 Score=31.37 Aligned_cols=16 Identities=25% Similarity=0.368 Sum_probs=12.0
Q ss_pred EEEE-cCCCCCchhhhH
Q 042373 161 SVAI-TETGSGKTLAFL 176 (494)
Q Consensus 161 vi~~-a~TGSGKTlafl 176 (494)
+|++ ||.||||+...-
T Consensus 5 iI~I~GppGSGKgT~ak 21 (225)
T d1ckea_ 5 VITIDGPSGAGKGTLCK 21 (225)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 4555 999999997543
No 188
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]}
Probab=24.34 E-value=15 Score=31.05 Aligned_cols=19 Identities=21% Similarity=0.300 Sum_probs=15.9
Q ss_pred cCCCEEEEcCCCCCchhhh
Q 042373 157 SGLDSVAITETGSGKTLAF 175 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTlaf 175 (494)
.|+-++++++.|+|||...
T Consensus 14 ~g~gvli~G~sG~GKS~la 32 (177)
T d1knxa2 14 FGVGVLLTGRSGIGKSECA 32 (177)
T ss_dssp TTEEEEEEESSSSSHHHHH
T ss_pred CCEEEEEEcCCCCCHHHHH
Confidence 5778999999999998543
No 189
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.30 E-value=15 Score=33.61 Aligned_cols=11 Identities=36% Similarity=0.498 Sum_probs=9.2
Q ss_pred EEcCCCCCchh
Q 042373 163 AITETGSGKTL 173 (494)
Q Consensus 163 ~~a~TGSGKTl 173 (494)
+.|++|||||.
T Consensus 32 i~G~qGSGKST 42 (286)
T d1odfa_ 32 FSGPQGSGKSF 42 (286)
T ss_dssp EECCTTSSHHH
T ss_pred eECCCCCCHHH
Confidence 35999999993
No 190
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=24.26 E-value=35 Score=31.22 Aligned_cols=12 Identities=17% Similarity=0.213 Sum_probs=9.9
Q ss_pred EEcCCCCCchhh
Q 042373 163 AITETGSGKTLA 174 (494)
Q Consensus 163 ~~a~TGSGKTla 174 (494)
++|+.|||||..
T Consensus 85 IaG~sgSGKSTl 96 (308)
T d1sq5a_ 85 IAGSVAVGKSTT 96 (308)
T ss_dssp EEECTTSSHHHH
T ss_pred EeCCCCCCCcHH
Confidence 459999999963
No 191
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=24.21 E-value=14 Score=32.80 Aligned_cols=17 Identities=29% Similarity=0.407 Sum_probs=14.2
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.-+-+++|+|||||.
T Consensus 28 ~Ge~~~liG~sGaGKST 44 (240)
T d1g2912 28 DGEFMILLGPSGCGKTT 44 (240)
T ss_dssp TTCEEEEECSTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 45667888999999996
No 192
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=24.14 E-value=28 Score=30.08 Aligned_cols=51 Identities=16% Similarity=0.077 Sum_probs=31.8
Q ss_pred HHHHHHHHhCCCCCCChhHHHHHHHHHcC----CCEEEEcCCCCCchhhhHHHHHHHH
Q 042373 130 TKILETFSKLNHENPVAIQAPASALIISG----LDSVAITETGSGKTLAFLLPMLRHI 183 (494)
Q Consensus 130 ~~ll~~l~~~g~~~ptpiQ~~aip~il~g----rdvi~~a~TGSGKTlafllpil~~l 183 (494)
..|++-|+-.|++-..= ..++-.++.| +-+++.+|.++|||+- ...++..+
T Consensus 23 ~~I~~~l~~q~i~~~~F--l~~l~~~l~~~PKkn~i~~~GP~~TGKS~f-~~sl~~~l 77 (205)
T d1tuea_ 23 RPIVQFLRYQQIEFITF--LGALKSFLKGTPKKNCLVFCGPANTGKSYF-GMSFIHFI 77 (205)
T ss_dssp HHHHHHHHHTTCCHHHH--HHHHHHHHHTCTTCSEEEEESCGGGCHHHH-HHHHHHHH
T ss_pred HHHHHHHHhcCccHHHH--HHHHHHHHcCCCCceEEEEECCCCccHHHH-HHHHHHHh
Confidence 67788887776652211 2344455666 3567779999999963 44455544
No 193
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=23.97 E-value=18 Score=31.84 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=25.4
Q ss_pred hHHHHHHHHHcCCCEEEEcCCCCCchhhhHHHHHHHHH
Q 042373 147 IQAPASALIISGLDSVAITETGSGKTLAFLLPMLRHIW 184 (494)
Q Consensus 147 iQ~~aip~il~grdvi~~a~TGSGKTlafllpil~~l~ 184 (494)
.....+...+.|+-.++++++|.|||. ++..+.
T Consensus 84 ~g~~~L~~~l~~kt~~~~G~SGVGKST-----LiN~L~ 116 (225)
T d1u0la2 84 MGIEELKEYLKGKISTMAGLSGVGKSS-----LLNAIN 116 (225)
T ss_dssp TTHHHHHHHHSSSEEEEECSTTSSHHH-----HHHHHS
T ss_pred hhHhhHHHHhcCCeEEEECCCCCCHHH-----HHHhhc
Confidence 344556667789999999999999996 566664
No 194
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=23.81 E-value=16 Score=32.40 Aligned_cols=17 Identities=29% Similarity=0.380 Sum_probs=14.6
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.-+.+++|+|||||.
T Consensus 30 ~Ge~~~iiG~sGsGKST 46 (240)
T d3dhwc1 30 AGQIYGVIGASGAGKST 46 (240)
T ss_dssp SSCEEEEEESTTSSHHH
T ss_pred CCCEEEEECCCCCCHHH
Confidence 46677889999999996
No 195
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=23.50 E-value=15 Score=32.65 Aligned_cols=17 Identities=35% Similarity=0.399 Sum_probs=14.4
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.-+.+++|+|||||.
T Consensus 31 ~Ge~~~liGpsGaGKST 47 (239)
T d1v43a3 31 DGEFLVLLGPSGCGKTT 47 (239)
T ss_dssp TTCEEEEECCTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 46667888999999997
No 196
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF1 [TaxId: 9606]}
Probab=23.36 E-value=14 Score=28.99 Aligned_cols=13 Identities=23% Similarity=0.286 Sum_probs=12.0
Q ss_pred EEEEcCCCCCchh
Q 042373 161 SVAITETGSGKTL 173 (494)
Q Consensus 161 vi~~a~TGSGKTl 173 (494)
++++|+.|+|||.
T Consensus 3 ivlvG~~~vGKSs 15 (160)
T d1r8sa_ 3 ILMVGLDAAGKTT 15 (160)
T ss_dssp EEEECSTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 6899999999996
No 197
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=23.27 E-value=14 Score=32.82 Aligned_cols=15 Identities=40% Similarity=0.607 Sum_probs=11.8
Q ss_pred CCE-EEEcCCCCCchh
Q 042373 159 LDS-VAITETGSGKTL 173 (494)
Q Consensus 159 rdv-i~~a~TGSGKTl 173 (494)
+.+ .+.+|+|||||.
T Consensus 24 ~e~~~liGpnGaGKST 39 (240)
T d2onka1 24 RDYCVLLGPTGAGKSV 39 (240)
T ss_dssp SSEEEEECCTTSSHHH
T ss_pred CEEEEEECCCCChHHH
Confidence 344 467999999996
No 198
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.86 E-value=18 Score=31.99 Aligned_cols=17 Identities=29% Similarity=0.380 Sum_probs=14.3
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.-+.+++|+|||||.
T Consensus 25 ~Gei~~liGpsGsGKST 41 (232)
T d2awna2 25 EGEFVVFVGPSGCGKST 41 (232)
T ss_dssp TTCEEEEECCTTSSHHH
T ss_pred CCCEEEEECCCCChHHH
Confidence 46667888999999996
No 199
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]}
Probab=22.45 E-value=18 Score=30.35 Aligned_cols=19 Identities=21% Similarity=0.365 Sum_probs=15.9
Q ss_pred cCCCEEEEcCCCCCchhhh
Q 042373 157 SGLDSVAITETGSGKTLAF 175 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTlaf 175 (494)
.|+-++++++.|+|||...
T Consensus 14 ~g~gvli~G~sg~GKS~la 32 (169)
T d1ko7a2 14 YGVGVLITGDSGIGKSETA 32 (169)
T ss_dssp TTEEEEEEESTTSSHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHH
Confidence 5778999999999998643
No 200
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=22.23 E-value=14 Score=29.54 Aligned_cols=21 Identities=24% Similarity=0.303 Sum_probs=16.1
Q ss_pred CEEEEcCCCCCchhhhHHHHHHHHHc
Q 042373 160 DSVAITETGSGKTLAFLLPMLRHIWE 185 (494)
Q Consensus 160 dvi~~a~TGSGKTlafllpil~~l~~ 185 (494)
-++++|++|+|||. ++.++..
T Consensus 15 kI~lvG~~~vGKTs-----Ll~~l~~ 35 (186)
T d1f6ba_ 15 KLVFLGLDNAGKTT-----LLHMLKD 35 (186)
T ss_dssp EEEEEEETTSSHHH-----HHHHHSC
T ss_pred EEEEECCCCCCHHH-----HHHHHhC
Confidence 48999999999996 4555543
No 201
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=22.17 E-value=16 Score=32.21 Aligned_cols=17 Identities=35% Similarity=0.411 Sum_probs=14.2
Q ss_pred cCCCEEEEcCCCCCchh
Q 042373 157 SGLDSVAITETGSGKTL 173 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTl 173 (494)
.|.=+-+++|+|+|||.
T Consensus 31 ~Gei~~liGpnGaGKST 47 (240)
T d1ji0a_ 31 RGQIVTLIGANGAGKTT 47 (240)
T ss_dssp TTCEEEEECSTTSSHHH
T ss_pred CCCEEEEECCCCCcHHH
Confidence 45667788999999997
No 202
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]}
Probab=22.05 E-value=18 Score=30.54 Aligned_cols=19 Identities=26% Similarity=0.417 Sum_probs=16.0
Q ss_pred cCCCEEEEcCCCCCchhhh
Q 042373 157 SGLDSVAITETGSGKTLAF 175 (494)
Q Consensus 157 ~grdvi~~a~TGSGKTlaf 175 (494)
.|+-++++++.|+|||...
T Consensus 13 ~g~gvl~~G~sG~GKStla 31 (176)
T d1kkma_ 13 YGLGVLITGDSGVGKSETA 31 (176)
T ss_dssp TTEEEEEECCTTSCHHHHH
T ss_pred CCEEEEEEeCCCCCHHHHH
Confidence 4678999999999998644
No 203
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=21.37 E-value=40 Score=29.24 Aligned_cols=19 Identities=21% Similarity=-0.024 Sum_probs=14.7
Q ss_pred CCEEEEcCCCCCchhhhHH
Q 042373 159 LDSVAITETGSGKTLAFLL 177 (494)
Q Consensus 159 rdvi~~a~TGSGKTlafll 177 (494)
|=++++++-|.|||.+...
T Consensus 9 ~~i~~sGKGGVGKTTvaa~ 27 (296)
T d1ihua1 9 PYLFFTGKGGVGKTSISCA 27 (296)
T ss_dssp SEEEEECSTTSSHHHHHHH
T ss_pred eEEEEECCCcChHHHHHHH
Confidence 4467789999999986654
No 204
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli [TaxId: 562]}
Probab=21.33 E-value=17 Score=30.89 Aligned_cols=13 Identities=31% Similarity=0.317 Sum_probs=10.9
Q ss_pred EEcCCCCCchhhh
Q 042373 163 AITETGSGKTLAF 175 (494)
Q Consensus 163 ~~a~TGSGKTlaf 175 (494)
++|..|||||.+.
T Consensus 8 itG~igSGKStv~ 20 (208)
T d1vhta_ 8 LTGGIGSGKSTVA 20 (208)
T ss_dssp EECCTTSCHHHHH
T ss_pred EECCCcCCHHHHH
Confidence 6799999999743
No 205
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=21.27 E-value=17 Score=30.04 Aligned_cols=13 Identities=38% Similarity=0.419 Sum_probs=10.9
Q ss_pred EEEEcCCCCCchh
Q 042373 161 SVAITETGSGKTL 173 (494)
Q Consensus 161 vi~~a~TGSGKTl 173 (494)
+++.|..|||||.
T Consensus 12 I~ieG~~GsGKTT 24 (197)
T d2vp4a1 12 VLIEGNIGSGKTT 24 (197)
T ss_dssp EEEECSTTSCHHH
T ss_pred EEEECCCCCCHHH
Confidence 4566999999996
No 206
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId: 1313]}
Probab=20.42 E-value=18 Score=30.32 Aligned_cols=14 Identities=21% Similarity=0.067 Sum_probs=11.0
Q ss_pred EEcCCCCCchhhhH
Q 042373 163 AITETGSGKTLAFL 176 (494)
Q Consensus 163 ~~a~TGSGKTlafl 176 (494)
+-||.|||||...-
T Consensus 8 IdGp~GsGKgT~ak 21 (223)
T d1q3ta_ 8 IDGPASSGKSTVAK 21 (223)
T ss_dssp EECSSCSSHHHHHH
T ss_pred EECCCCCCHHHHHH
Confidence 44999999997543
No 207
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.01 E-value=26 Score=28.24 Aligned_cols=21 Identities=29% Similarity=0.499 Sum_probs=15.9
Q ss_pred EEEEcCCCCCchhhhHHHHHHHHHcC
Q 042373 161 SVAITETGSGKTLAFLLPMLRHIWEQ 186 (494)
Q Consensus 161 vi~~a~TGSGKTlafllpil~~l~~~ 186 (494)
++++|..|+|||. ++.++...
T Consensus 6 ivvvG~~~vGKTs-----li~r~~~~ 26 (173)
T d2a5ja1 6 YIIIGDTGVGKSC-----LLLQFTDK 26 (173)
T ss_dssp EEEESSTTSSHHH-----HHHHHHHS
T ss_pred EEEECCCCcCHHH-----HHHHHhcC
Confidence 7899999999995 45555543
Done!