Query 042381
Match_columns 353
No_of_seqs 251 out of 1474
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 09:29:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042381.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042381hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1o70_A Fasciclin I, FAS I, FCN 100.0 9.1E-40 3.1E-44 314.6 17.1 256 51-352 6-312 (324)
2 2vxp_A Transforming growth fac 99.9 5.6E-24 1.9E-28 179.0 11.2 118 221-348 4-132 (132)
3 1w7d_A Fasciclin-like protein; 99.9 2.1E-24 7E-29 182.7 5.6 118 223-351 7-137 (137)
4 1nyo_A Immunogenic protein MPT 99.9 3.4E-23 1.2E-27 180.4 8.3 118 221-351 30-163 (163)
5 2vxp_A Transforming growth fac 99.9 1.3E-22 4.5E-27 170.5 10.5 120 51-178 2-132 (132)
6 1w7d_A Fasciclin-like protein; 99.9 1.3E-23 4.5E-28 177.8 3.3 121 51-180 3-136 (137)
7 1nyo_A Immunogenic protein MPT 99.9 5.8E-22 2E-26 172.6 8.0 121 49-180 26-162 (163)
8 1o70_A Fasciclin I, FAS I, FCN 99.8 2.1E-18 7.2E-23 165.5 10.5 121 228-352 22-159 (324)
9 2raq_A Conserved protein MTH88 12.8 59 0.002 24.9 0.8 13 334-346 70-82 (97)
10 3bpd_A Uncharacterized protein 12.4 1.6E+02 0.0054 22.6 3.0 42 305-346 36-82 (100)
No 1
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=100.00 E-value=9.1e-40 Score=314.62 Aligned_cols=256 Identities=14% Similarity=0.146 Sum_probs=182.0
Q ss_pred hhHHHHHH-------hCCcHHHHHHHhcCc----ccccCCCCeEEEEeCCHhhhcCC-----CChHHHHHhhhccccCCc
Q 042381 51 SNASKALR-------RSGFNIIATLLQVSP----EIFLSSHNSTIFAIQDSAISNTS-----LPPWLFKKLLQYHTSPLK 114 (353)
Q Consensus 51 ~~i~~~L~-------~~g~t~la~ll~~~~----~~l~~~~~~TvFAPtd~Af~~~~-----~~~~~l~~lL~yHvvp~~ 114 (353)
.||+++|+ ...|++|+++|+.++ +.|.+.+++|||||+|+||.+.. .+...++++|+||+++++
T Consensus 6 ~~i~~~L~~~~~~~~~~~~s~~~~~l~~ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~ 85 (324)
T 1o70_A 6 TTVTQFLQSFKENAENGALRKFYEVIMDNGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDR 85 (324)
T ss_dssp -------------CCHHHHHHHHHHHHHTCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSC
T ss_pred hhHHHHHHHHHhhhcCCcHHHHHHHHHHHhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCe
Confidence 48888887 445999999999886 46777899999999999998764 244568999999999999
Q ss_pred cchhhhcCCCCC-c-eeeeeecCceEEEEEcc-ceeeEEEEee----EEEeccceeecCceEEEEeCcccCCCCCCCCCC
Q 042381 115 LSMNDLLMKPQG-S-CLPTFLHQKKVAITKIV-VKERLIEINN----VLVSRPDIFLEGSLSIHGVLEPFSSLDPQNIHP 187 (353)
Q Consensus 115 ~~~~~L~~~~~g-~-~~~Tll~~~~l~v~~~~-~~~~~v~vn~----a~V~~~di~~~g~~vVH~Id~vL~p~~~~~~~~ 187 (353)
+..++|.....+ . .++|+..+..++++..+ +..+.+++|+ ++|+.+|+.. .+|+||+||+||.||...
T Consensus 86 ~~~~~l~~~~~~~~~~~~Tl~g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~-~NGvIhvID~VL~pp~~t---- 160 (324)
T 1o70_A 86 LNVDKIRQKNANLIAQVPTVNNNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQ-TNGYVHIIDHVLGVPYTT---- 160 (324)
T ss_dssp CCHHHHHHHTSSSCCCEEBSSTTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEEC-SSEEEEEESSCTTSCCSC----
T ss_pred ecHHHHhhccCCCceEEEcCCCCceEEEEEeecCCceEEEEcCCceeEEEEeccccc-cCcEEEEEchhhhhchhh----
Confidence 999998764311 1 56775433335655442 1234688885 8999999874 367999999999886321
Q ss_pred CcccccCCCCCCCCCccccCcchhhhhhhhHHHHHHHHhc-CChHHHHHHHHHHHHHHHHhhc-CCCCeEEEeeCcHHHh
Q 042381 188 GWDYIQSPICDSFSSTLVSDITESKNMVNEWTKIIRLLSS-NGFVSFAIGLHSVIDQILEDNI-NLNSTTIFAPADFAVV 265 (353)
Q Consensus 188 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~g~~~~a~aL~~~l~~l~~~l~-~~~~~TvFAPtD~Af~ 265 (353)
+.+.++. ..|+.|..+++. +++.+.|. ..++||||||+|+||+
T Consensus 161 ---------------------------------i~~~l~~~~~fs~~~~~l~~--~gl~~~L~~~~~~~TvFAPtd~Af~ 205 (324)
T 1o70_A 161 ---------------------------------VLGKLESDPMMSDTYKMGKF--SHFNDQLNNTQRRFTYFVPRDKGWQ 205 (324)
T ss_dssp ---------------------------------HHHHHHHCGGGHHHHHHTTT--TTTTGGGGCSSSEEEEEEECHHHHH
T ss_pred ---------------------------------HHHHhhcCchHHHHHHHHHh--hCHHHHhCCCCCCeEEEEeChHHHH
Confidence 1123333 347777666654 44555565 4688999999999999
Q ss_pred hCC------------h---hHHHHHhhhccccc--ccchhhhccCCC--C-ceeecccCCceEEEEe--cCCceeeEEEc
Q 042381 266 ASS------------S---PLLDRIVRLHILPQ--RFTYKELASLPG--K-TLLKTLVPNQYLVISG--GADFIQGFDIN 323 (353)
Q Consensus 266 ~~~------------~---~~L~~iL~yHvvp~--~~~~~~l~~l~~--g-~~l~Tl~~g~~l~v~~--~~~~~~~v~vn 323 (353)
+++ . +.|+++|+|||+|+ .+..++|..... + ..++|+. ..+.++. .++. ++||
T Consensus 206 ~l~~~~~~~~~~~l~~~~~~~l~~iL~yHvv~~~~~~~~~~l~~~~~~~~~~~~~Tl~--~~l~v~~~~~~~~---v~v~ 280 (324)
T 1o70_A 206 KTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTFR--DSLSIRVEEEAGR---YVII 280 (324)
T ss_dssp HHHHHCHHHHHHHTSGGGHHHHHHHHHTTEEEESSCCCHHHHHHHHHHSSSEEEECSS--SEEEEEEEEETTE---EEEE
T ss_pred hhhhhchhHHHHHhccCcHHHHHHHHHhcEeCCcceEcHHHHhhhccCCCeeeeeccC--CcEEEEEEecCCE---EEEE
Confidence 873 1 25789999999998 777788864210 1 1478874 6787765 4555 8887
Q ss_pred ----eEEEeccceeecCCeEEEEeCccccCCCC
Q 042381 324 ----GVQIFAPEIFSSKQFVIHGISQAFRDSRT 352 (353)
Q Consensus 324 ----~a~I~~~di~~~~~gvVH~Id~VL~~~~~ 352 (353)
+++|+.+|+.++| ||||+||+||.|++.
T Consensus 281 ~~~~~a~v~~~di~~~N-GvIHvID~VL~P~~~ 312 (324)
T 1o70_A 281 WNYKKINVYRPDVECTN-GIIHVIDYPLLEEKD 312 (324)
T ss_dssp ETTEEEEEEEEEEEETT-EEEEEESSCSCCTTT
T ss_pred ecCceeEEEEcccccCC-CeEEEeceeecCCcc
Confidence 8999999998875 799999999999863
No 2
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.90 E-value=5.6e-24 Score=178.97 Aligned_cols=118 Identities=22% Similarity=0.300 Sum_probs=98.5
Q ss_pred HHHHHhc-CChHHHHHHHHHHHHHHHHhhcCCCCeEEEeeCcHHHhhCChh----------HHHHHhhhcccccccchhh
Q 042381 221 IIRLLSS-NGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSSP----------LLDRIVRLHILPQRFTYKE 289 (353)
Q Consensus 221 ~~~~L~~-~g~~~~a~aL~~~l~~l~~~l~~~~~~TvFAPtD~Af~~~~~~----------~L~~iL~yHvvp~~~~~~~ 289 (353)
+++.|+. .+|+.|+.++++ +++.+.|.+.++||||||+|+||++++.. .|+++|+|||+|+.+...+
T Consensus 4 i~~~l~~~~~fs~~~~~l~~--agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~ 81 (132)
T 2vxp_A 4 VMDVLKGDNRFSMLVAAIQS--AGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGG 81 (132)
T ss_dssp HHHHHTTSTTCHHHHHHHHH--HTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTT
T ss_pred HHHHHHcCCCHHHHHHHHHH--cCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhh
Confidence 3456654 579999999987 67777787889999999999999998753 3679999999999887666
Q ss_pred hccCCCCceeecccCCceEEEEecCCceeeEEEceEEEeccceeecCCeEEEEeCcccc
Q 042381 290 LASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFR 348 (353)
Q Consensus 290 l~~l~~g~~l~Tl~~g~~l~v~~~~~~~~~v~vn~a~I~~~di~~~~~gvVH~Id~VL~ 348 (353)
+ ..+..++|+ .|..+.|+..++. ++||+++|+.+|+.++| ||||+||+||.
T Consensus 82 l---~~~~~~~tl-~G~~l~v~~~~~~---v~vn~a~v~~~di~a~N-GvIHvID~VLl 132 (132)
T 2vxp_A 82 I---GALVRLKSL-QGDKLEVSLKNNV---VSVNKEPVAEPDIMATN-GVVHVITNVLQ 132 (132)
T ss_dssp C---SSCEEEEBT-TSSEEEEEEETTE---EEESSCBEEEEEEEETT-EEEEEESSCC-
T ss_pred c---cCCceEecC-CCCEEEEEEeCCE---EEEeccEEEEcceecCC-EEEEEECcEeC
Confidence 5 346688897 6999999998876 99999999999998875 79999999984
No 3
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.90 E-value=2.1e-24 Score=182.75 Aligned_cols=118 Identities=21% Similarity=0.292 Sum_probs=97.8
Q ss_pred HHHh-cCChHHHHHHHHHHHHHHHHhhcCCCCeEEEeeCcHHHhhCCh------------hHHHHHhhhcccccccchhh
Q 042381 223 RLLS-SNGFVSFAIGLHSVIDQILEDNINLNSTTIFAPADFAVVASSS------------PLLDRIVRLHILPQRFTYKE 289 (353)
Q Consensus 223 ~~L~-~~g~~~~a~aL~~~l~~l~~~l~~~~~~TvFAPtD~Af~~~~~------------~~L~~iL~yHvvp~~~~~~~ 289 (353)
+.|+ ..+|+.|+.+|+. +++.+.|.+.++||||||+|+||++++. +.|+++|+|||+|+++..++
T Consensus 7 ~~l~~~~~~s~f~~~l~~--agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~~~ 84 (137)
T 1w7d_A 7 ETATGAGSFTTLLTAAEA--AGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMSSD 84 (137)
T ss_dssp GGGGSCSSSTTTTHHHHH--TTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCTTT
T ss_pred HHHHhCCCHHHHHHHHHH--cCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcHHH
Confidence 3443 3568888888876 6677778778999999999999999853 23689999999999998887
Q ss_pred hccCCCCceeecccCCceEEEEecCCceeeEEEceEEEeccceeecCCeEEEEeCccccCCC
Q 042381 290 LASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSR 351 (353)
Q Consensus 290 l~~l~~g~~l~Tl~~g~~l~v~~~~~~~~~v~vn~a~I~~~di~~~~~gvVH~Id~VL~~~~ 351 (353)
+. .|..++|+ .|..+.|+..+| ++|||++|+.+|+.++| ||||+||+||.|+.
T Consensus 85 l~---~~~~~~tl-~G~~l~v~~~~g----v~vn~a~v~~~di~~~N-GvIHvID~VL~P~s 137 (137)
T 1w7d_A 85 LT---EGMTAETV-EGGALTVTLEGG----PKVNGVSISQPDVDASN-GVIHVIDGVLMPGA 137 (137)
T ss_dssp SC---SSEEEECT-TSCEEEEECTTS----CEETTEECSBCCCBCSS-SEEEBCSSCCSSCC
T ss_pred hc---CCCeeecc-CCceEEEEecCC----EEEeCcEEEECCeecCC-eEEEEECeeeCCCC
Confidence 64 47778887 699999998754 89999999999998775 69999999999873
No 4
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.88 E-value=3.4e-23 Score=180.42 Aligned_cols=118 Identities=13% Similarity=0.218 Sum_probs=99.6
Q ss_pred HHHHHhc-CChHHHHHHHH-----HHHHHHHHhhcCCCCeEEEeeCcHHHhhCCh----------hHHHHHhhhcccccc
Q 042381 221 IIRLLSS-NGFVSFAIGLH-----SVIDQILEDNINLNSTTIFAPADFAVVASSS----------PLLDRIVRLHILPQR 284 (353)
Q Consensus 221 ~~~~L~~-~g~~~~a~aL~-----~~l~~l~~~l~~~~~~TvFAPtD~Af~~~~~----------~~L~~iL~yHvvp~~ 284 (353)
+.+.|++ .+|+.|+.+|+ . +++.+.|.+.+ ||||||+|+||++++. +.|+++|+|||++++
T Consensus 30 i~~~l~~~~~~s~f~~~l~~~~~~~--agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~g~ 106 (163)
T 1nyo_A 30 VAVAASNNPELTTLTAALSGQLNPQ--VNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQ 106 (163)
T ss_dssp HHHHHTTSTTTHHHHHHHHSSSCTT--CCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEESC
T ss_pred HHHHHHhCCCHHHHHHHHHhccccc--cCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceECCE
Confidence 4566654 56999999997 5 56667777777 9999999999999875 246899999999999
Q ss_pred cchhhhccCCCCceeecccCCceEEEEecCCceeeEEEceEEEeccceeecCCeEEEEeCccccCCC
Q 042381 285 FTYKELASLPGKTLLKTLVPNQYLVISGGADFIQGFDINGVQIFAPEIFSSKQFVIHGISQAFRDSR 351 (353)
Q Consensus 285 ~~~~~l~~l~~g~~l~Tl~~g~~l~v~~~~~~~~~v~vn~a~I~~~di~~~~~gvVH~Id~VL~~~~ 351 (353)
+..++|. | .++|+ .|+.|.|+..++. ++||+++|+.+|+.++ +||||+||+||.|+.
T Consensus 107 ~~~~~l~----g-~~~Tl-~G~~l~v~~~~~~---v~vn~a~V~~~di~a~-NGvIHvID~VL~P~~ 163 (163)
T 1nyo_A 107 TSPANVV----G-TRQTL-QGASVTVTGQGNS---LKVGNADVVCGGVSTA-NATVYMIDSVLMPPA 163 (163)
T ss_dssp CCTTTSC----E-EEECT-TSSEEEEEECSSC---EEETTEECSSBCCCCS-SEEEBCBSSCCCCCC
T ss_pred EcHHHhC----C-ccccC-CCCEEEEEEECCE---EEEeccEEEECceEcC-CEEEEEECcEeCCCC
Confidence 9888874 4 68897 6999999998776 9999999999999876 489999999999874
No 5
>2vxp_A Transforming growth factor-beta-induced protein IG-H3; RGD-containing collagen-associated protein, FAS1, BIGH3, vision, amyloid, RGD-CAP, secreted; 2.5A {Homo sapiens} PDB: 1x3b_A
Probab=99.88 E-value=1.3e-22 Score=170.53 Aligned_cols=120 Identities=18% Similarity=0.231 Sum_probs=99.3
Q ss_pred hhHHHHHHhC-CcHHHHHHHhcCc--ccccCCCCeEEEEeCCHhhhcCCC--------ChHHHHHhhhccccCCccchhh
Q 042381 51 SNASKALRRS-GFNIIATLLQVSP--EIFLSSHNSTIFAIQDSAISNTSL--------PPWLFKKLLQYHTSPLKLSMND 119 (353)
Q Consensus 51 ~~i~~~L~~~-g~t~la~ll~~~~--~~l~~~~~~TvFAPtd~Af~~~~~--------~~~~l~~lL~yHvvp~~~~~~~ 119 (353)
.+|.++|++. +|++|+++++.++ +.|.+.+++|||||+|+||++++. +...++++|+||++|+.+..++
T Consensus 2 ~ti~~~l~~~~~fs~~~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~l~~iL~yHvv~~~~~~~~ 81 (132)
T 2vxp_A 2 GTVMDVLKGDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILKYHIGDEILVSGG 81 (132)
T ss_dssp CCHHHHHTTSTTCHHHHHHHHHHTCHHHHHSSCCEEEEEECHHHHHHSCHHHHHHHHTCHHHHHHHHHHSBBSSCCCSTT
T ss_pred ccHHHHHHcCCCHHHHHHHHHHcCcHHHHcCCCCEEEEeECHHHHHhhCHHHHHHHhcCHHHHHHHHHhcCcCceeehhh
Confidence 3788999864 5999999999987 568778999999999999999861 3446889999999999988888
Q ss_pred hcCCCCCceeeeeecCceEEEEEccceeeEEEEeeEEEeccceeecCceEEEEeCcccC
Q 042381 120 LLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFS 178 (353)
Q Consensus 120 L~~~~~g~~~~Tll~~~~l~v~~~~~~~~~v~vn~a~V~~~di~~~g~~vVH~Id~vL~ 178 (353)
+.. +..++| +.|..++|+..++ .++||+++|+.+|+... +|+||+||+||.
T Consensus 82 l~~---~~~~~t-l~G~~l~v~~~~~---~v~vn~a~v~~~di~a~-NGvIHvID~VLl 132 (132)
T 2vxp_A 82 IGA---LVRLKS-LQGDKLEVSLKNN---VVSVNKEPVAEPDIMAT-NGVVHVITNVLQ 132 (132)
T ss_dssp CSS---CEEEEB-TTSSEEEEEEETT---EEEESSCBEEEEEEEET-TEEEEEESSCC-
T ss_pred ccC---CceEec-CCCCEEEEEEeCC---EEEEeccEEEEcceecC-CEEEEEECcEeC
Confidence 753 456777 5788999987753 69999999999998753 579999999983
No 6
>1w7d_A Fasciclin-like protein; cell adhesion; NMR {Rhodobacter sphaeroides} PDB: 1w7e_A
Probab=99.87 E-value=1.3e-23 Score=177.79 Aligned_cols=121 Identities=19% Similarity=0.212 Sum_probs=100.5
Q ss_pred hhHHHHHHhC-CcHHHHHHHhcCc--ccccCCCCeEEEEeCCHhhhcCCC----------ChHHHHHhhhccccCCccch
Q 042381 51 SNASKALRRS-GFNIIATLLQVSP--EIFLSSHNSTIFAIQDSAISNTSL----------PPWLFKKLLQYHTSPLKLSM 117 (353)
Q Consensus 51 ~~i~~~L~~~-g~t~la~ll~~~~--~~l~~~~~~TvFAPtd~Af~~~~~----------~~~~l~~lL~yHvvp~~~~~ 117 (353)
.+|.++|++. +|++|+++++.++ +.|.+.+++|||||+|+||++++. +...++++|+||++++++..
T Consensus 3 ~~i~~~l~~~~~~s~f~~~l~~agl~~~L~~~~~~TvFAPtn~Af~~l~~~~~~~l~~~~~~~~l~~lL~yHvv~~~~~~ 82 (137)
T 1w7d_A 3 GDIVETATGAGSFTTLLTAAEAAGLVDTLKGDGPFTVFAPTDAAFAALPEGTVEDLLKPENKEKLTEILTYHVVPGEVMS 82 (137)
T ss_dssp STTGGGGGSCSSSTTTTHHHHHTTTHHHHTSSSCEEEECCCHHHHTTSTTTHHHHTTSHHHHHHHHHHHHHHEEESCCCT
T ss_pred CCHHHHHHhCCCHHHHHHHHHHcCCHHHHcCCCCEEEEEECHHHHHHcCHhHHHHHhCcCCHHHHHHHHHhhEeCcEEcH
Confidence 3778888754 5999999999997 567778999999999999999862 23357899999999999999
Q ss_pred hhhcCCCCCceeeeeecCceEEEEEccceeeEEEEeeEEEeccceeecCceEEEEeCcccCCC
Q 042381 118 NDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSL 180 (353)
Q Consensus 118 ~~L~~~~~g~~~~Tll~~~~l~v~~~~~~~~~v~vn~a~V~~~di~~~g~~vVH~Id~vL~p~ 180 (353)
++|.. |..+.| +.|..++|+..+ + ++||+++|+.+|+... +|+||+||+||.|+
T Consensus 83 ~~l~~---~~~~~t-l~G~~l~v~~~~---g-v~vn~a~v~~~di~~~-NGvIHvID~VL~P~ 136 (137)
T 1w7d_A 83 SDLTE---GMTAET-VEGGALTVTLEG---G-PKVNGVSISQPDVDAS-NGVIHVIDGVLMPG 136 (137)
T ss_dssp TTSCS---SEEEEC-TTSCEEEEECTT---S-CEETTEECSBCCCBCS-SSEEEBCSSCCSSC
T ss_pred HHhcC---CCeeec-cCCceEEEEecC---C-EEEeCcEEEECCeecC-CeEEEEECeeeCCC
Confidence 99875 456766 578899998763 4 8999999999998742 45999999999885
No 7
>1nyo_A Immunogenic protein MPT70; seven-stranded beta-barrel, fasciclin domain, structural genomics, PSI, protein structure initiative; NMR {Mycobacterium tuberculosis} SCOP: b.118.1.1
Probab=99.85 E-value=5.8e-22 Score=172.60 Aligned_cols=121 Identities=17% Similarity=0.160 Sum_probs=100.9
Q ss_pred chhhHHHHHHhC-CcHHHHHHHh-----cCc--ccccCCCCeEEEEeCCHhhhcCCC--------ChHHHHHhhhccccC
Q 042381 49 LFSNASKALRRS-GFNIIATLLQ-----VSP--EIFLSSHNSTIFAIQDSAISNTSL--------PPWLFKKLLQYHTSP 112 (353)
Q Consensus 49 ~~~~i~~~L~~~-g~t~la~ll~-----~~~--~~l~~~~~~TvFAPtd~Af~~~~~--------~~~~l~~lL~yHvvp 112 (353)
...+|.++|++. +|++|+++|+ .++ +.|.+.+ +|||||+|+||++++. +...++++|+||+++
T Consensus 26 ~~~~i~~~l~~~~~~s~f~~~l~~~~~~~agl~~~L~~~g-~TvFAPtn~AF~~l~~~~~~~L~~~~~~L~~iL~yHvv~ 104 (163)
T 1nyo_A 26 SQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQ-YTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVVA 104 (163)
T ss_dssp HHSCHHHHHTTSTTTHHHHHHHHSSSCTTCCCHHHHTSSS-EEECCBCHHHHHHSCHHHHHHHTTCSSHHHHHHHHTEEE
T ss_pred CCcCHHHHHHhCCCHHHHHHHHHhccccccCHHHHhCCCC-cEEEEECHHHHHhccHHHHHHHhcCHHHHHHHHHhceEC
Confidence 446899999865 4999999999 776 5677777 9999999999999861 234588999999999
Q ss_pred CccchhhhcCCCCCceeeeeecCceEEEEEccceeeEEEEeeEEEeccceeecCceEEEEeCcccCCC
Q 042381 113 LKLSMNDLLMKPQGSCLPTFLHQKKVAITKIVVKERLIEINNVLVSRPDIFLEGSLSIHGVLEPFSSL 180 (353)
Q Consensus 113 ~~~~~~~L~~~~~g~~~~Tll~~~~l~v~~~~~~~~~v~vn~a~V~~~di~~~g~~vVH~Id~vL~p~ 180 (353)
+++..++|. | .++| +.|..++|+..++ .++||+++|+.+|+.. .+|+||+||+||.|+
T Consensus 105 g~~~~~~l~----g-~~~T-l~G~~l~v~~~~~---~v~vn~a~V~~~di~a-~NGvIHvID~VL~P~ 162 (163)
T 1nyo_A 105 GQTSPANVV----G-TRQT-LQGASVTVTGQGN---SLKVGNADVVCGGVST-ANATVYMIDSVLMPP 162 (163)
T ss_dssp SCCCTTTSC----E-EEEC-TTSSEEEEEECSS---CEEETTEECSSBCCCC-SSEEEBCBSSCCCCC
T ss_pred CEEcHHHhC----C-cccc-CCCCEEEEEEECC---EEEEeccEEEECceEc-CCEEEEEECcEeCCC
Confidence 999999985 2 5677 4788999988753 6999999999999874 367999999999985
No 8
>1o70_A Fasciclin I, FAS I, FCN; cell adhesion, AXON guidance, extracellular module, genetic disorder, corneal dystrophy; HET: NAG; 2.6A {Drosophila melanogaster} SCOP: b.118.1.1 b.118.1.1
Probab=99.75 E-value=2.1e-18 Score=165.52 Aligned_cols=121 Identities=17% Similarity=0.248 Sum_probs=91.6
Q ss_pred CChHHHHHHHHHHHHH--HHHhhcCCCCeEEEeeCcHHHhhCC-------hhHHHHHhhhcccccccchhhhccCCC-C-
Q 042381 228 NGFVSFAIGLHSVIDQ--ILEDNINLNSTTIFAPADFAVVASS-------SPLLDRIVRLHILPQRFTYKELASLPG-K- 296 (353)
Q Consensus 228 ~g~~~~a~aL~~~l~~--l~~~l~~~~~~TvFAPtD~Af~~~~-------~~~L~~iL~yHvvp~~~~~~~l~~l~~-g- 296 (353)
..|+.|..+|+. ++ +.+.|.+.++||||||+|+||.++. .+.|+++|+|||+++++..++|..... |
T Consensus 22 ~~~s~~~~~l~~--ag~~l~~~L~~~~~~TvFAPtn~Af~~~~~~~l~~~~~~l~~iL~yHvv~g~~~~~~l~~~~~~~~ 99 (324)
T 1o70_A 22 GALRKFYEVIMD--NGGAVLDDINSLTEVTILAPSNEAWNSSNINNVLRDRNKMRQILNMHIIKDRLNVDKIRQKNANLI 99 (324)
T ss_dssp HHHHHHHHHHHH--TCSHHHHHHHTCSSEEEEEECHHHHHHTCTHHHHTCHHHHHHHHHHTEESSCCCHHHHHHHTSSSC
T ss_pred CcHHHHHHHHHH--HhHHHHHHHcCCCCeEEEEEChHhhhcccHhhhhCCHHHHHHHHHhcEeCCeecHHHHhhccCCCc
Confidence 447788877765 44 6667777899999999999998863 345789999999999999998865331 1
Q ss_pred ceeecccCCce-EEEEecCC-ceeeEEEce----EEEeccceeecCCeEEEEeCccccCCCC
Q 042381 297 TLLKTLVPNQY-LVISGGAD-FIQGFDING----VQIFAPEIFSSKQFVIHGISQAFRDSRT 352 (353)
Q Consensus 297 ~~l~Tl~~g~~-l~v~~~~~-~~~~v~vn~----a~I~~~di~~~~~gvVH~Id~VL~~~~~ 352 (353)
..++|+. |.. +.+...++ ....+++|| ++|+.+|+.++| ||||+||+||.|+..
T Consensus 100 ~~~~Tl~-g~~~l~~~v~~~~~~~~v~v~~g~~~a~v~~~di~~~N-GvIhvID~VL~pp~~ 159 (324)
T 1o70_A 100 AQVPTVN-NNTFLYFNVRGEGSDTVITVEGGGVNATVIQADVAQTN-GYVHIIDHVLGVPYT 159 (324)
T ss_dssp CCEEBSS-TTCEEEEEEESCGGGCEEEEEETTEEEEEEEEEEECSS-EEEEEESSCTTSCCS
T ss_pred eEEEcCC-CCceEEEEEeecCCceEEEEcCCceeEEEEeccccccC-cEEEEEchhhhhchh
Confidence 1688975 654 55554431 123488985 999999998764 799999999999763
No 9
>2raq_A Conserved protein MTH889; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.11A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: d.58.61.1
Probab=12.85 E-value=59 Score=24.87 Aligned_cols=13 Identities=23% Similarity=0.230 Sum_probs=10.1
Q ss_pred ecCCeEEEEeCcc
Q 042381 334 SSKQFVIHGISQA 346 (353)
Q Consensus 334 ~~~~gvVH~Id~V 346 (353)
..-||+||.||.|
T Consensus 70 E~~Gg~IHSIDEV 82 (97)
T 2raq_A 70 ESYGGSIHSVDEV 82 (97)
T ss_dssp HHTTCEEEEEEEE
T ss_pred HHcCCeEEeeeee
Confidence 3457899999965
No 10
>3bpd_A Uncharacterized protein; heptamer, Mg+2 ION, PSI-2, NYSGXRC, structural genom protein structure initiative; 2.80A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.61.1
Probab=12.37 E-value=1.6e+02 Score=22.56 Aligned_cols=42 Identities=17% Similarity=0.145 Sum_probs=25.2
Q ss_pred CceEEEEecCCcee--eEEEceEEEeccce---eecCCeEEEEeCcc
Q 042381 305 NQYLVISGGADFIQ--GFDINGVQIFAPEI---FSSKQFVIHGISQA 346 (353)
Q Consensus 305 g~~l~v~~~~~~~~--~v~vn~a~I~~~di---~~~~~gvVH~Id~V 346 (353)
|-++++..-+-.+. .+.|-|..|-.-++ ...-+|+||.||.|
T Consensus 36 gVnItV~EvD~eTe~lkItIEG~dIdfd~I~~~IE~~GgvIHSIDEV 82 (100)
T 3bpd_A 36 GVNIHLSEIDQATENIKITILGNNLDYEQIKGVIEDMGGVIHSVDEV 82 (100)
T ss_dssp EEEEEEEEECSSEEEEEEEEEEEEECHHHHHHHHHTTTCEEEEEEEE
T ss_pred eEEEEEEEeeccccEEEEEEEecCCCHHHHHHHHHHcCCeEEeeeee
Confidence 44555555443322 46666777754333 34557899999977
Done!