BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042383
(353 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 236 bits (602), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 178/295 (60%), Gaps = 3/295 (1%)
Query: 36 LKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-EKE 94
L + FS EL+ A++ F + N +G GGFG VYKG+L DGT+VAVK L E QG E +
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQ 81
Query: 95 FMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTAR 154
F +EV ++ H NL++L G C+ R++VY YM N S++ L +++ W R
Sbjct: 82 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 141
Query: 155 REIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST 214
+ IALG ARGLAY+H+ P I+HRD+K +NILLD+ F + DFGL+KL H+
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 201
Query: 215 RVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAW-- 272
V GT+G++AP+Y +G + K+D++ +GV+LL+++TGQ A + + ++ W
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 261
Query: 273 EMHNTDKLQHLVDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
+ KL+ LVD L GN+ E + ++V LLC Q RP+MS V+ M+ G
Sbjct: 262 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 231 bits (590), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/295 (39%), Positives = 176/295 (59%), Gaps = 3/295 (1%)
Query: 36 LKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-EKE 94
L + FS EL+ A++ F + N +G GGFG VYKG+L DG +VAVK L E QG E +
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQ 73
Query: 95 FMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTAR 154
F +EV ++ H NL++L G C+ R++VY YM N S++ L +++ W R
Sbjct: 74 FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKR 133
Query: 155 REIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST 214
+ IALG ARGLAY+H+ P I+HRD+K +NILLD+ F + DFGL+KL H+
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXX 193
Query: 215 RVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAW-- 272
V G +G++AP+Y +G + K+D++ +GV+LL+++TGQ A + + ++ W
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 253
Query: 273 EMHNTDKLQHLVDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
+ KL+ LVD L GN+ E + ++V LLC Q RP+MS V+ M+ G
Sbjct: 254 GLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 115/278 (41%), Positives = 161/278 (57%), Gaps = 4/278 (1%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANI 105
+L+ ATN F +G G FG VYKG L+DG VA+K + ES QG +EF +E+ +++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H +LV L G C E I++Y YM+N +L + L G + SW R EI +G ARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLA 224
Y+H +I+HRD+K NILLD+NF PKI+DFG+SK E D TH+ V GTLGY+
Sbjct: 153 HYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLV 284
P+Y + G L KSD+YSFGV+L +++ ++A+ L E A E HN +L+ +V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 285 DPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVI 322
DP L +F + C+ S RP M V+
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/278 (41%), Positives = 160/278 (57%), Gaps = 4/278 (1%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANI 105
+L+ ATN F +G G FG VYKG L+DG VA+K + ES QG +EF +E+ +++
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H +LV L G C E I++Y YM+N +L + L G + SW R EI +G ARGL
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLA 224
Y+H +I+HRD+K NILLD+NF PKI+DFG+SK E TH+ V GTLGY+
Sbjct: 153 HYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLV 284
P+Y + G L KSD+YSFGV+L +++ ++A+ L E A E HN +L+ +V
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 285 DPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVI 322
DP L +F + C+ S RP M V+
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 168/299 (56%), Gaps = 23/299 (7%)
Query: 40 NAFSYNELKSATNGF------CSSNKVGEGGFGSVYKGKLQDGTVVAVKVLS----VESK 89
++FS+ ELK+ TN F NK+GEGGFG VYKG + + T VAVK L+ + ++
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 71
Query: 90 QGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF 149
+ +++F E+ MA HENLV+L G +G +VY YM N SL L +
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPL 130
Query: 150 SWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKL---FP 206
SW R +IA G A G+ ++HE +HRDIK +NILLD+ F KISDFGL++ F
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 207 EDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY 266
+ + + +R+ GT Y+AP+ A+ G + PKSDIYSFGV+LL+I+TG AV +E
Sbjct: 188 QTV--MXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 267 LVEKAWEMHNTDKLQHLVDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMI 325
+++ E ++ M + + EA+ V C+ EK + RP + V +++
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAM--YSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 167/299 (55%), Gaps = 23/299 (7%)
Query: 40 NAFSYNELKSATNGF------CSSNKVGEGGFGSVYKGKLQDGTVVAVKVLS----VESK 89
++FS+ ELK+ TN F NK+GEGGFG VYKG + + T VAVK L+ + ++
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 71
Query: 90 QGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF 149
+ +++F E+ MA HENLV+L G +G +VY YM N SL L +
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPL 130
Query: 150 SWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKL---FP 206
SW R +IA G A G+ ++HE +HRDIK +NILLD+ F KISDFGL++ F
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 207 EDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY 266
+ + + R+ GT Y+AP+ A+ G + PKSDIYSFGV+LL+I+TG AV +E
Sbjct: 188 QTV--MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 267 LVEKAWEMHNTDKLQHLVDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMI 325
+++ E ++ M + + EA+ V C+ EK + RP + V +++
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAM--YSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 112/300 (37%), Positives = 167/300 (55%), Gaps = 23/300 (7%)
Query: 40 NAFSYNELKSATNGF------CSSNKVGEGGFGSVYKGKLQDGTVVAVKVLS----VESK 89
++FS+ ELK+ TN F NK+GEGGFG VYKG + + T VAVK L+ + ++
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTE 65
Query: 90 QGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF 149
+ +++F E+ MA HENLV+L G +G +VY YM N SL L +
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD-GTPPL 124
Query: 150 SWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKL---FP 206
SW R +IA G A G+ ++HE +HRDIK +NILLD+ F KISDFGL++ F
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 207 EDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY 266
+ + + R+ GT Y+AP+ A+ G + PKSDIYSFGV+LL+I+TG AV +E
Sbjct: 182 QXV--MXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
Query: 267 LVEKAWEMHNTDKLQHLVDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
+++ E ++ M + + EA+ V C+ EK + RP + V +++
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDADSTSVEAM--YSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 152 bits (383), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/235 (42%), Positives = 138/235 (58%), Gaps = 21/235 (8%)
Query: 40 NAFSYNELKSATNGF------CSSNKVGEGGFGSVYKGKLQDGTVVAVKVLS----VESK 89
++FS+ ELK+ TN F NK GEGGFG VYKG + + T VAVK L+ + ++
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTE 62
Query: 90 QGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF 149
+ +++F E+ A HENLV+L G +G +VY Y N SL L +
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLD-GTPPL 121
Query: 150 SWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKL---FP 206
SW R +IA G A G+ ++HE +HRDIK +NILLD+ F KISDFGL++ F
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 207 EDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+ + +R+ GT Y AP+ A+ G + PKSDIYSFGV+LL+I+TG AV +E
Sbjct: 179 QXVX--XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHRE 230
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 113/205 (55%), Gaps = 9/205 (4%)
Query: 54 FCSSN---KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEK--EFMSEVASMANICHE 108
+C N K+G G FG+V++ + G+ VAVK+L + E+ EF+ EVA M + H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 109 NLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
N+V G + P IV +Y+ SL + LL + R + R +A +A+G+ Y+
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H P IVHRD+K N+L+D+ + K+ DFGLS+L S AGT ++AP+
Sbjct: 154 HNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL-XSKXAAGTPEWMAPEVL 211
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQ 253
N KSD+YSFGV+L ++ T Q
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQ 236
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 118/206 (57%), Gaps = 11/206 (5%)
Query: 54 FCSSN---KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEK--EFMSEVASMANICHE 108
+C N K+G G FG+V++ + G+ VAVK+L + E+ EF+ EVA M + H
Sbjct: 36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHP 94
Query: 109 NLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
N+V G + P IV +Y+ SL + LL + R + R +A +A+G+ Y+
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEYLSRGSLYR-LLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTR-VAGTLGYLAPDY 227
H P IVHR++K N+L+D+ + K+ DFGLS+L + T +S++ AGT ++AP+
Sbjct: 154 HNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEV 210
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTGQ 253
N KSD+YSFGV+L ++ T Q
Sbjct: 211 LRDEPSNEKSDVYSFGVILWELATLQ 236
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P I++ +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 137
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ +N K++DFGL++L ++ + + AP+ A+ G KSD
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL ++ T
Sbjct: 198 VWSFGILLTELTT 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 73
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P I+ +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 74 EEPIXIVT-EYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 127
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ +N K++DFGL++L ++ + + AP+ A+ G KSD
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL ++ T
Sbjct: 188 VWSFGILLTELTT 200
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 107/194 (55%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P I++ +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 84 EEPIYIVI-EYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 137
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M I HE LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVS 83
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P IV +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 137
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 76
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P IV +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 77 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 130
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 190 DVWSFGILLTELTT 203
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P I+ +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 250 EEPIYIVT-EYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 303
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 363 DVWSFGILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P I+ +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 250 EEPIYIVT-EYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 303
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ +N K++DFGL++L ++ + + AP+ A+ G KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL ++ T
Sbjct: 364 VWSFGILLTELTT 376
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 72
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P I+ +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 73 EEPIYIVT-EYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 126
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 127 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 186 DVWSFGILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 74
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P IV +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 75 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 128
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 129 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 188 DVWSFGILLTELTT 201
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P IV +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 84 EEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 137
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + S +A I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQI 120
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 237
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 238 PEKVYELMRACWQWNPSDR 256
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P I+ +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 84 EEPIYIVC-EYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 137
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 249
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P IV +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 250 EEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 303
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ +N K++DFGL++L ++ + + AP+ A+ G KSD
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL ++ T
Sbjct: 364 VWSFGILLTELTT 376
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + S +A I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQI 120
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 237
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 238 PEKVYELMRACWQWNPSDR 256
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 332
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P IV +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 333 EEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 386
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 446 DVWSFGILLTELTT 459
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + S +A I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQI 120
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 237
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 238 PEKVYELMRACWQWNPSDR 256
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + S +A I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQI 120
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 237
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 238 PEKVYELMRACWQWNPSDR 256
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P IV +YM SL L GE + +++ IA G+AY+ + + VH
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLV--DMSAQIASGMAYVE---RMNYVH 134
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 194 DVWSFGILLTELTT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + S +A I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQI 125
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 242
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 243 PEKVYELMRACWQWNPSDR 261
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 80
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P IV +YM SL L GE + +++ IA G+AY+ + + VH
Sbjct: 81 EEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLV--DMSAQIASGMAYVE---RMNYVH 134
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ +N K++DFGL++L ++ + + AP+ A+ G KSD
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL ++ T
Sbjct: 195 VWSFGILLTELTT 207
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 121/226 (53%), Gaps = 27/226 (11%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKL-QDGTVVAVKVLSVESKQGE-------KEFMSEVAS 101
A N ++G+GGFG V+KG+L +D +VVA+K L + +GE +EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M+N+ H N+VKL+ G + P R+++ +++ L LL + W+ + + L I
Sbjct: 77 MSNLNHPNIVKLY-GLMHNPPRMVM-EFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDI 131
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNIL---LDQN--FNPKISDFGLSKLFPEDITHISTRV 216
A G+ Y+ + P IVHRD++ NI LD+N K++DFGLS + H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGL 186
Query: 217 AGTLGYLAPDY--AVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDK 260
G ++AP+ A K+D YSF ++L I+TG+ FD+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP--FDE 230
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 167 GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 227 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 272
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 273 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 250
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P I+ +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 251 EEPIYIVT-EYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 304
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL +L ED + + + A + + AP+ A+ G KS
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 364 DVWSFGILLTELTT 377
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 58 NKVGEGGFGSVYKGKL------QDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
++GEG FG V+ + QD +VAVK L S K+F E + N+ HE++V
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIV 78
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQ---------TLLGEEKNRAKFSWTARREIALGIA 162
K +G C+EG I+V++YM++ L++ L+ E + + + IA IA
Sbjct: 79 KFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIA 138
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLG 221
G+ Y+ + VHRD+ N L+ +N KI DFG+S+ ++ D + +
Sbjct: 139 AGMVYLASQ---HFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 195
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + +SD++S GV+L +I T
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P I+ +YM SL L GE + ++A IA G+AY+ + + VH
Sbjct: 84 EEPIYIVT-EYMSKGSLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 137
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD+ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 138 RDLAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 121
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 122 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 178
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 238
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 239 PEKVYELMRACWQWNPSDR 257
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V G+L+ VA+K L V +++ ++F+ E + M H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L +KN +F+ + GI+ G+ Y+ +
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFL---KKNDGQFTVIQLVGMLRGISAGMKYLSDM--- 143
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + AP+
Sbjct: 144 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G+++ ++V+ Y WEM N D ++ L P
Sbjct: 204 FTSASDVWSYGIVMWEVVS--------------YGERPYWEMTNQDVIKAVEEGYRLPSP 249
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q++ + RP+ ++ M++
Sbjct: 250 MDC-------PAALYQLMLDCWQKERNSRPKFDEIVNMLD 282
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 125
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIK 182
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 242
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 243 PEKVYELMRACWQWNPSDR 261
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 106/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P I++ +YM L L GE + ++A IA G+AY+ + + VH
Sbjct: 84 EEPIYIVM-EYMSKGCLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 137
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 120
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 237
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 238 PEKVYELMRACWQWNPSDR 256
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 125
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 242
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 243 PEKVYELMRACWQWNPSDR 261
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 122
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK 179
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 239
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 240 PEKVYELMRACWQWNPSDR 258
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 121
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 122 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK 178
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 238
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 239 PEKVYELMRACWQWNPSDR 257
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
K+G+G FG V+ G T VA+K L + E F+ E M + HE LV+L+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVS 83
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P IV +YM L L GE + ++A IA G+AY+ + + VH
Sbjct: 84 EEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLV--DMAAQIASGMAYVE---RMNYVH 137
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKS 237
RD++ +NIL+ +N K++DFGL++L ED + + + A + + AP+ A+ G KS
Sbjct: 138 RDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 196
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL ++ T
Sbjct: 197 DVWSFGILLTELTT 210
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 66
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 124
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 125 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 181
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 182 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 241
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 242 PEKVYELMRACWQWNPSDR 260
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 125
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 242
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 243 PEKVYELMRACWQWNPSDR 261
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 120
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 121 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 177
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 237
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 238 PEKVYELMRACWQWNPSDR 256
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 84 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 137
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 198 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 243
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 244 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 227 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 272
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 273 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 227 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 272
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 273 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 227 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 272
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 273 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 227 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 272
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 273 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 75
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 133
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 134 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 190
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 250
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 251 PEKVYELMRACWQWNPSDR 269
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 101 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 154
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 155 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 214
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 215 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 260
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 261 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 293
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 122
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 239
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 240 PEKVYELMRACWQWNPSDR 258
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 111 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 164
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 165 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 224
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 225 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 270
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 271 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 303
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 122
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 123 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 179
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 239
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 240 PEKVYELMRACWQWNPSDR 258
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 125
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HRD+ N L+ +N K++DFGLS+L D +
Sbjct: 126 SSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 182
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 242
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 243 PEKVYELMRACWQWNPSDR 261
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 8/244 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGG 116
+K+G G FG VY+G + ++ VAVK L ++ + E EF+ E A M I H NLV+L G
Sbjct: 17 HKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
C P I+ ++M +L L E NR + S +A I+ + Y+ K +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPK 236
+HRD+ N L+ +N K++DFGLS+L D + + AP+ + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 237 SDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKLQHLVDPMLCGNFSGN 295
SD+++FGVLL +I T + + + + Y L+EK + M + V ++ + N
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 250
Query: 296 EAVR 299
+ R
Sbjct: 251 PSDR 254
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGL+++ +D T G + + +P+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 227 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 272
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 273 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 135/281 (48%), Gaps = 41/281 (14%)
Query: 60 VGEGGFGSVYKGKLQDGT-----VVAVKVLSVESKQGEK-EFMSEVASMANICHENLVKL 113
+G G FG VYKG L+ + VA+K L + ++ +F+ E M H N+++L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
G + +I+ +YM+N +L + L EK+ +FS + GIA G+ Y+
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFL--REKD-GEFSVLQLVGMLRGIAAGMKYLANM-- 166
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSG 231
+ VHRD+ NIL++ N K+SDFGLS++ +D T G + + AP+
Sbjct: 167 -NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 232 HLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVD------ 285
SD++SFG+++ +++T Y WE+ N + ++ + D
Sbjct: 226 KFTSASDVWSFGIVMWEVMT--------------YGERPYWELSNHEVMKAINDGFRLPT 271
Query: 286 PMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
PM C + ++ + C Q++ + RP+ + ++ +++
Sbjct: 272 PMDCPS-------AIYQLMMQCWQQERARRPKFADIVSILD 305
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 120/226 (53%), Gaps = 27/226 (11%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKL-QDGTVVAVKVLSVESKQGE-------KEFMSEVAS 101
A N ++G+GGFG V+KG+L +D +VVA+K L + +GE +EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M+N+ H N+VKL+ G + P R+++ +++ L LL + W+ + + L I
Sbjct: 77 MSNLNHPNIVKLY-GLMHNPPRMVM-EFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDI 131
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNIL---LDQN--FNPKISDFGLSKLFPEDITHISTRV 216
A G+ Y+ + P IVHRD++ NI LD+N K++DFG S + H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGL 186
Query: 217 AGTLGYLAPDY--AVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDK 260
G ++AP+ A K+D YSF ++L I+TG+ FD+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP--FDE 230
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V G+L+ VA+K L + + ++F+SE + M H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +I+ +YM+N SL L KN +F+ + GI G+ Y+ +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM--- 150
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
S VHRD+ NIL++ N K+SDFG+S++ +D T G + + AP+
Sbjct: 151 SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G+++ ++++ Y W+M N D ++ L P
Sbjct: 211 FTSASDVWSYGIVMWEVMS--------------YGERPYWDMSNQDVIKAIEEGYRLPPP 256
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C + ++ L C Q++ S RP+ ++ M++
Sbjct: 257 MDC-------PIALHQLMLDCWQKERSDRPKFGQIVNMLD 289
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 120/226 (53%), Gaps = 27/226 (11%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKL-QDGTVVAVKVLSVESKQGE-------KEFMSEVAS 101
A N ++G+GGFG V+KG+L +D +VVA+K L + +GE +EF EV
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M+N+ H N+VKL+ G + P R+++ +++ L LL + W+ + + L I
Sbjct: 77 MSNLNHPNIVKLY-GLMHNPPRMVM-EFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDI 131
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNIL---LDQN--FNPKISDFGLSKLFPEDITHISTRV 216
A G+ Y+ + P IVHRD++ NI LD+N K++DF LS + H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGL 186
Query: 217 AGTLGYLAPDY--AVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDK 260
G ++AP+ A K+D YSF ++L I+TG+ FD+
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP--FDE 230
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 114/223 (51%), Gaps = 8/223 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGG 116
+K+G G +G VY G + ++ VAVK L ++ + E EF+ E A M I H NLV+L G
Sbjct: 38 HKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 96
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
C P IV +YM +L L E NR + + +A I+ + Y+ K +
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYLE---KKNF 151
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPK 236
+HRD+ N L+ +N K++DFGLS+L D + + AP+ + K
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 237 SDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTD 278
SD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 212 SDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPE 254
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V G+L+ VA+K L + + ++F+SE + M H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +I+ +YM+N SL L KN +F+ + GI G+ Y+ +
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM--- 129
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
S VHRD+ NIL++ N K+SDFG+S++ +D T G + + AP+
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G+++ ++++ Y W+M N D ++ L P
Sbjct: 190 FTSASDVWSYGIVMWEVMS--------------YGERPYWDMSNQDVIKAIEEGYRLPPP 235
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C + ++ L C Q++ S RP+ ++ M++
Sbjct: 236 MDC-------PIALHQLMLDCWQKERSDRPKFGQIVNMLD 268
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 130/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V G+L+ VA+K L + + ++F+SE + M H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +I+ +YM+N SL L KN +F+ + GI G+ Y+ +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFL---RKNDGRFTVIQLVGMLRGIGSGMKYLSDM--- 135
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
S VHRD+ NIL++ N K+SDFG+S++ +D T G + + AP+
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G+++ ++++ Y W+M N D ++ L P
Sbjct: 196 FTSASDVWSYGIVMWEVMS--------------YGERPYWDMSNQDVIKAIEEGYRLPPP 241
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C + ++ L C Q++ S RP+ ++ M++
Sbjct: 242 MDC-------PIALHQLMLDCWQKERSDRPKFGQIVNMLD 274
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV +YM+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGL ++ +D T G + + +P+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 227 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 272
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 273 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 25/268 (9%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIE 119
VG G FG V K K + VA+K +ES+ K F+ E+ ++ + H N+VKL+G C+
Sbjct: 16 VGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 120 GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHR 179
C +V +Y + SL L G E ++ L ++G+AY+H +++HR
Sbjct: 73 PVC--LVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 180 DIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
D+KP N+LL KI DFG + DI T G+ ++AP+ + + K D
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 239 IYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVDPMLCGNFSGNEAV 298
++S+G++L +++T + FD+ G + + W +HN + P L N + +
Sbjct: 186 VFSWGIILWEVITRRKP--FDEIGGPAFRI--MWAVHNGTR------PPLIKNLP--KPI 233
Query: 299 RFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
L C + S RP M +++++
Sbjct: 234 ESLMT--RCWSKDPSQRPSMEEIVKIMT 259
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 131/268 (48%), Gaps = 25/268 (9%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIE 119
VG G FG V K K + VA+K +ES+ K F+ E+ ++ + H N+VKL+G C+
Sbjct: 17 VGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 120 GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHR 179
C +V +Y + SL L G E ++ L ++G+AY+H +++HR
Sbjct: 74 PVC--LVMEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 180 DIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
D+KP N+LL KI DFG + DI T G+ ++AP+ + + K D
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTAC----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 239 IYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVDPMLCGNFSGNEAV 298
++S+G++L +++T + FD+ G + + W +HN + P L N + +
Sbjct: 187 VFSWGIILWEVITRRKP--FDEIGGPAFRI--MWAVHNGTR------PPLIKNLP--KPI 234
Query: 299 RFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
L C + S RP M +++++
Sbjct: 235 ESLMT--RCWSKDPSQRPSMEEIVKIMT 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 8/244 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGG 116
+K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A M I H NLV+L G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
C P I+ ++M +L L E NR + S +A I+ + Y+ K +
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPK 236
+HRD+ N L+ +N K++DFGLS+L D + + AP+ + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 237 SDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKLQHLVDPMLCGNFSGN 295
SD+++FGVLL +I T + + + + Y L+EK + M + V ++ + N
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 250
Query: 296 EAVR 299
+ R
Sbjct: 251 PSDR 254
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 102/194 (52%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V+ G + VA+K + E E++F+ E M + H LV+L+G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+E +V+++M++ LS L R F+ + L + G+AY+ E S++
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEE---ASVI 125
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L+ +N K+SDFG+++ +D ST + + +P+ + KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 238 DIYSFGVLLLQIVT 251
D++SFGVL+ ++ +
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 112/223 (50%), Gaps = 13/223 (5%)
Query: 32 GAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG 91
G++ K + +E + ++G G FG V+ G T VAVK L KQG
Sbjct: 1 GSQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSL----KQG 56
Query: 92 E---KEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAK 148
F++E M + H+ LV+L+ + P II +YM+N SL L + + K
Sbjct: 57 SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL--KTPSGIK 113
Query: 149 FSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPED 208
+ ++A IA G+A+I E + +HRD++ +NIL+ + KI+DFGL++L ++
Sbjct: 114 LTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 170
Query: 209 ITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ + AP+ G KSD++SFG+LL +IVT
Sbjct: 171 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 79 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 79
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 80 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 133
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 194 VWSFGILLTEIVT 206
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 87
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 88 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 141
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 202 VWSFGILLTEIVT 214
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 80
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 81 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 134
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 195 VWSFGILLTEIVT 207
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 79 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 78
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 79 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 85 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 199 VWSFGILLTEIVT 211
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 84
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 85 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 199 VWSFGILLTEIVT 211
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 83
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 84 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 137
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 198 VWSFGILLTEIVT 210
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 211 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 269
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + S +A I
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQI 327
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HR++ N L+ +N K++DFGLS+L D +
Sbjct: 328 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 384
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 444
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 445 PEKVYELMRACWQWNPSDR 463
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 73
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 74 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 127
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 188 VWSFGILLTEIVT 200
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 121/244 (49%), Gaps = 8/244 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGG 116
+K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A M I H NLV+L G
Sbjct: 17 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGV 75
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
C P I+ ++M +L L E NR + S +A I+ + Y+ K +
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLE---KKNF 130
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPK 236
+HRD+ N L+ +N K++DFGLS+L D + + AP+ + K
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 237 SDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKLQHLVDPMLCGNFSGN 295
SD+++FGVLL +I T + + + + Y L+EK + M + V ++ + N
Sbjct: 191 SDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 250
Query: 296 EAVR 299
+ R
Sbjct: 251 PSDR 254
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV + M+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 167 GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 227 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 272
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 273 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGE---KEFMSEVASMANICHENLVKLHG 115
++G G FG V+ G T VAVK L KQG F++E M + H+ LV+L+
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSL----KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 85
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ P II +YM+N SL L + + K + ++A IA G+A+I E +
Sbjct: 86 VVTQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---N 139
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
+HRD++ +NIL+ + KI+DFGL++L ++ + + AP+ G
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 199
Query: 236 KSDIYSFGVLLLQIVT 251
KSD++SFG+LL +IVT
Sbjct: 200 KSDVWSFGILLTEIVT 215
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV + M+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 166
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 167 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 226
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 227 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 272
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 273 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 305
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
VG G FG V G+L+ VA+K L V +++ ++F+ E + M H N+++L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +IV + M+N SL L K+ A+F+ + GIA G+ Y+ +
Sbjct: 84 GVVTKSKPVMIVTEXMENGSLDSFL---RKHDAQFTVIQLVGMLRGIASGMKYLSDM--- 137
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D T G + + +P+
Sbjct: 138 GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRK 197
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G++L ++++ Y WEM N D ++ L P
Sbjct: 198 FTSASDVWSYGIVLWEVMS--------------YGERPYWEMSNQDVIKAVDEGYRLPPP 243
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q+ + RP+ ++ +++
Sbjct: 244 MDC-------PAALYQLMLDCWQKDRNNRPKFEQIVSILD 276
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V+ G + VA+K + E E++F+ E M + H LV+L+G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+E +V+++M++ LS L R F+ + L + G+AY+ E ++
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 125
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L+ +N K+SDFG+++ +D ST + + +P+ + KS
Sbjct: 126 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 185
Query: 238 DIYSFGVLLLQIVT 251
D++SFGVL+ ++ +
Sbjct: 186 DVWSFGVLMWEVFS 199
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 18 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 74
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA ARG+ Y+H + S
Sbjct: 75 GYSTKPQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---S 128
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ + +H +++G++ ++AP+ N
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 189 PYSFQSDVYAFGIVLYELMTGQ 210
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V+ G + VA+K + E E++F+ E M + H LV+L+G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+E +V+++M++ LS L R F+ + L + G+AY+ E ++
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 123
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L+ +N K+SDFG+++ +D ST + + +P+ + KS
Sbjct: 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 183
Query: 238 DIYSFGVLLLQIVT 251
D++SFGVL+ ++ +
Sbjct: 184 DVWSFGVLMWEVFS 197
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V+ G + VA+K + E E++F+ E M + H LV+L+G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+E +V+++M++ LS L R F+ + L + G+AY+ E ++
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 128
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L+ +N K+SDFG+++ +D ST + + +P+ + KS
Sbjct: 129 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 188
Query: 238 DIYSFGVLLLQIVT 251
D++SFGVL+ ++ +
Sbjct: 189 DVWSFGVLMWEVFS 202
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V+ G + VA+K + E E +F+ E M + H LV+L+G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+E +V+++M++ LS L R F+ + L + G+AY+ E ++
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 145
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L+ +N K+SDFG+++ +D ST + + +P+ + KS
Sbjct: 146 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 205
Query: 238 DIYSFGVLLLQIVT 251
D++SFGVL+ ++ +
Sbjct: 206 DVWSFGVLMWEVFS 219
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 208 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 266
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 324
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HR++ N L+ +N K++DFGLS+L D +
Sbjct: 325 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 381
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 441
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 442 PEKVYELMRACWQWNPSDR 460
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 40/281 (14%)
Query: 60 VGEGGFGSVYKGKL----QDGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
+G G G V G+L Q VA+K L +++ ++F+SE + M H N+++L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G G +IV +YM+N SL L + +F+ + G+ G+ Y+ +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYLSDL--- 170
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ N+L+D N K+SDFGLS++ +D T G + + AP+
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
+ SD++SFGV++ +++ Y W M N D + L P
Sbjct: 231 FSSASDVWSFGVVMWEVLA--------------YGERPYWNMTNRDVISSVEEGYRLPAP 276
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
M C + ++ L C + + RPR S ++ +++
Sbjct: 277 MGCPHA-------LHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 131/280 (46%), Gaps = 40/280 (14%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V G+L+ VA+K L V +++ ++F+ E + M H N+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G G +IV ++M+N +L L K+ +F+ + GIA G+ Y+ +
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFL---RKHDGQFTVIQLVGMLRGIAAGMRYLADM--- 164
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ NIL++ N K+SDFGLS++ +D + T G + + AP+
Sbjct: 165 GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
SD++S+G+++ ++++ Y W+M N D ++ L P
Sbjct: 225 FTSASDVWSYGIVMWEVMS--------------YGERPYWDMSNQDVIKAIEEGYRLPAP 270
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
M C ++ L C Q++ + RP+ ++ +++
Sbjct: 271 MDC-------PAGLHQLMLDCWQKERAERPKFEQIVGILD 303
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 86
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA ARG+ Y+H + S
Sbjct: 87 GYSTAPQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---S 140
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ +H +++G++ ++AP+ N
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQ 222
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 8/259 (3%)
Query: 43 SYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLSVESKQGEKEFMSEVAS 101
+Y++ + +K+G G +G VY+G + ++ VAVK L ++ + E EF+ E A
Sbjct: 250 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 308
Query: 102 MANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
M I H NLV+L G C P I+ ++M +L L E NR + + +A I
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVNAVVLLYMATQI 366
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ + Y+ K + +HR++ N L+ +N K++DFGLS+L D +
Sbjct: 367 SSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIK 423
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKL 280
+ AP+ + KSD+++FGVLL +I T + + +L + Y L+EK + M +
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC 483
Query: 281 QHLVDPMLCGNFSGNEAVR 299
V ++ + N + R
Sbjct: 484 PEKVYELMRACWQWNPSDR 502
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT 74
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +H
Sbjct: 75 QEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIH 128
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
R+++ +NIL+ + KI+DFGL++L ++ + + AP+ G KSD
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL +IVT
Sbjct: 189 VWSFGILLTEIVT 201
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 126/281 (44%), Gaps = 40/281 (14%)
Query: 60 VGEGGFGSVYKGKL----QDGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
+G G G V G+L Q VA+K L +++ ++F+SE + M H N+++L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G G +IV +YM+N SL L + +F+ + G+ G+ Y+ +
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFL---RTHDGQFTIMQLVGMLRGVGAGMRYLSDL--- 170
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG--YLAPDYAVSGH 232
VHRD+ N+L+D N K+SDFGLS++ +D T G + + AP+
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDP 286
+ SD++SFGV++ +++ Y W M N D + L P
Sbjct: 231 FSSASDVWSFGVVMWEVLA--------------YGERPYWNMTNRDVISSVEEGYRLPAP 276
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
M C + ++ L C + + RPR S ++ +++
Sbjct: 277 MGCPHA-------LHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 30 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 86
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA ARG+ Y+H + S
Sbjct: 87 GYSTKPQLAIVTQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---S 140
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ +H +++G++ ++AP+ N
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 201 PYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V+ G + VA+K + E E++F+ E M + H LV+L+G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+E +V ++M++ LS L R F+ + L + G+AY+ E ++
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL---RTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVI 126
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L+ +N K+SDFG+++ +D ST + + +P+ + KS
Sbjct: 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186
Query: 238 DIYSFGVLLLQIVT 251
D++SFGVL+ ++ +
Sbjct: 187 DVWSFGVLMWEVFS 200
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 99/193 (51%), Gaps = 7/193 (3%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
++G G FG V+ G T VA+K L + E F+ E M + H+ LV+L+
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPES-FLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
E P IV +YM SL L E K ++A +A G+AYI + + +H
Sbjct: 75 EEPI-YIVTEYMNKGSLLDFLKDGEGRALKLPNLV--DMAAQVAAGMAYIE---RMNYIH 128
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
RD++ +NIL+ KI+DFGL++L ++ + + AP+ A+ G KSD
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 239 IYSFGVLLLQIVT 251
++SFG+LL ++VT
Sbjct: 189 VWSFGILLTELVT 201
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA A+G+ Y+H + S
Sbjct: 71 GYSTAPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ + +H +++G++ ++AP+ N
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 75
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA A+G+ Y+H + S
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---S 129
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ + +H +++G++ ++AP+ N
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA A+G+ Y+H + S
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ + +H +++G++ ++AP+ N
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 16 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 72
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA A+G+ Y+H + S
Sbjct: 73 GYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---S 126
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ + +H +++G++ ++AP+ N
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 187 PYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 41 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 97
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA A+G+ Y+H + S
Sbjct: 98 GYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---S 151
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ + +H +++G++ ++AP+ N
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 212 PYSFQSDVYAFGIVLYELMTGQ 233
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 19 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 75
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA A+G+ Y+H + S
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---S 129
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ + +H +++G++ ++AP+ N
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 190 PYSFQSDVYAFGIVLYELMTGQ 211
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 98
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA A+G+ Y+H + S
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---S 152
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ + +H +++G++ ++AP+ N
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQ 234
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G G V+ G T VAVK L + F++E M + H+ LV+L+
Sbjct: 19 ERLGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ P II +YM+N SL L + + K + ++A IA G+A+I E + +
Sbjct: 78 TQEPIYIIT-EYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPK 236
HRD++ +NIL+ + KI+DFGL++L ED + A + + AP+ G K
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLI-EDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 237 SDIYSFGVLLLQIVT 251
SD++SFG+LL +IVT
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+G G FG V+ T VAVK + S E F++E M + H+ LVKLH
Sbjct: 21 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVV 79
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ P II ++M SL L +E ++ + + IA G+A+I + + +
Sbjct: 80 TKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NYI 133
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD++ +NIL+ + KI+DFGL+++ ++ + + AP+ G KS
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL++IVT
Sbjct: 194 DVWSFGILLMEIVT 207
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 110/209 (52%), Gaps = 27/209 (12%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC----HENLVKLHG 115
+G GGFG VY+ G VAVK + + + + V A + H N++ L G
Sbjct: 15 IGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRG 73
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEE-KNRAKFSWTARREIALGIARGLAYIHEEIKP 174
C++ P +V ++ + L++ L G+ +W A+ IARG+ Y+H+E
Sbjct: 74 VCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIV 127
Query: 175 SIVHRDIKPSNILLDQ--------NFNPKISDFGLSKLFPEDITHISTRV--AGTLGYLA 224
I+HRD+K SNIL+ Q N KI+DFGL++ + H +T++ AG ++A
Sbjct: 128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-----HRTTKMSAAGAYAWMA 182
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
P+ + + SD++S+GVLL +++TG+
Sbjct: 183 PEVIRASMFSKGSDVWSYGVLLWELLTGE 211
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 34 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 90
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA A+G+ Y+H + S
Sbjct: 91 GYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---S 144
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ +H +++G++ ++AP+ N
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 205 PYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 14 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 70
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA A+G+ Y+H + S
Sbjct: 71 GYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---S 124
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ +H +++G++ ++AP+ N
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 185 PYSFQSDVYAFGIVLYELMTGQ 206
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+G G FG V+ T VAVK + S E F++E M + H+ LVKLH
Sbjct: 194 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVV 252
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ P II ++M SL L +E ++ + + IA G+A+I + + +
Sbjct: 253 TKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NYI 306
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD++ +NIL+ + KI+DFGL+++ ++ + + AP+ G KS
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL++IVT
Sbjct: 367 DVWSFGILLMEIVT 380
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 110/202 (54%), Gaps = 15/202 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
++G G FG+VYKGK VAVK+L+V + Q + F +EV + H N++ L
Sbjct: 42 QRIGSGSFGTVYKGKWHGD--VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFM 98
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
G P IV + + +SL L E KF +IA A+G+ Y+H + S
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIE---TKFEMIKLIDIARQTAQGMDYLHAK---S 152
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+K +NI L ++ KI DFGL+ +H +++G++ ++AP+ N
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 235 P---KSDIYSFGVLLLQIVTGQ 253
P +SD+Y+FG++L +++TGQ
Sbjct: 213 PYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 104/213 (48%), Gaps = 22/213 (10%)
Query: 58 NKVGEGGFGSVYKGKL------QDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
++GEG FG V+ + +D +VAVK L + K+F E + N+ HE++V
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGE------------EKNRAKFSWTARREIAL 159
K +G C +G I+V++YM++ L++ L + + + + IA
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIAS 140
Query: 160 GIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAG 218
IA G+ Y+ + VHRD+ N L+ N KI DFG+S+ ++ D +
Sbjct: 141 QIASGMVYLASQ---HFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTML 197
Query: 219 TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ ++ P+ + +SD++SFGV+L +I T
Sbjct: 198 PIRWMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 114/217 (52%), Gaps = 24/217 (11%)
Query: 49 SATNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEF-MSEVASMANIC 106
S+++ F K+G G + +VYKG G VA+K + ++S++G + E++ M +
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNN--------SLSQTLLGEEKNRAK-FSWTARREI 157
HEN+V+L+ +V+++M N+ ++ T G E N K F W
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ----- 116
Query: 158 ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA 217
+ +GLA+ HE I+HRD+KP N+L+++ K+ DFGL++ F + S+ V
Sbjct: 117 ---LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV 170
Query: 218 GTLGYLAPDYAVSGHLNPKS-DIYSFGVLLLQIVTGQ 253
TL Y APD + S DI+S G +L +++TG+
Sbjct: 171 -TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 105/203 (51%), Gaps = 17/203 (8%)
Query: 58 NKVGEGGFGSVYKGKLQDGTV----VAVKVLSVESKQGE---KEFMSEVASMANICHENL 110
+K+G GG +VY L + T+ VA+K + + ++ E K F EV + + + H+N+
Sbjct: 17 DKLGGGGMSTVY---LAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNI 73
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
V + E C +V +Y++ +LS+ + ++ S I G+ + H+
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQILDGIKHAHD 129
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
IVHRDIKP NIL+D N KI DFG++K E + V GT+ Y +P+ A
Sbjct: 130 ---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 231 GHLNPKSDIYSFGVLLLQIVTGQ 253
+ +DIYS G++L +++ G+
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGE 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 44/283 (15%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V +G+L+ + VA+K L +++ +EF+SE + M H N+++L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G +I+ ++M+N +L L N +F+ + GIA G+ Y+ E
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFL---RLNDGQFTVIQLVGMLRGIASGMRYLAEM--- 135
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE---DITHISTRVAGTLG--YLAPDYAV 229
S VHRD+ NIL++ N K+SDFGLS+ E D T+ S+ + G + + AP+
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSS-LGGKIPIRWTAPEAIA 194
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HL 283
SD +S+G+++ ++++ GE W+M N D + L
Sbjct: 195 FRKFTSASDAWSYGIVMWEVMS----------FGE----RPYWDMSNQDVINAIEQDYRL 240
Query: 284 VDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
P C ++ L C Q+ + RPR V+ ++
Sbjct: 241 PPPPDC-------PTSLHQLMLDCWQKDRNARPRFPQVVSALD 276
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 141/320 (44%), Gaps = 55/320 (17%)
Query: 32 GAKILKNINAFSYNELKSATNGFCSS---------NKVGEGGFGSVYKGKLQ----DGTV 78
G KI I+ F++ + A F +G G FG V G L+
Sbjct: 6 GMKIF--IDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIF 63
Query: 79 VAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQ 137
VA+K L S +++ ++F+SE + M H N++ L G + +I+ ++M+N SL
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 138 TLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKIS 197
L +N +F+ + GIA G+ Y+ + + VHRD+ NIL++ N K+S
Sbjct: 124 FL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNLVCKVS 177
Query: 198 DFGLSKLFPEDITHISTRVAGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
DFGLS+ F ED T T + G + AP+ SD++S+G+++ ++++
Sbjct: 178 DFGLSR-FLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS- 235
Query: 253 QAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HLVDPMLCGNFSGNEAVRFLKVGLL 306
Y W+M N D + L PM C + ++ L
Sbjct: 236 -------------YGERPYWDMTNQDVINAIEQDYRLPPPMDCPS-------ALHQLMLD 275
Query: 307 CVQEKSSLRPRMSTVIEMIN 326
C Q+ + RP+ ++ ++
Sbjct: 276 CWQKDRNHRPKFGQIVNTLD 295
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 100/197 (50%), Gaps = 23/197 (11%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+G G FG V+ T VAVK + S E F++E M + H+ LVKLH
Sbjct: 188 KKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHAVV 246
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ P II ++M SL L +E ++ + + IA G+A+I + + +
Sbjct: 247 TKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQR---NYI 300
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKL---FPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
HRD++ +NIL+ + KI+DFGL+++ FP + + AP+ G
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVGAKFP-------------IKWTAPEAINFGSFT 347
Query: 235 PKSDIYSFGVLLLQIVT 251
KSD++SFG+LL++IVT
Sbjct: 348 IKSDVWSFGILLMEIVT 364
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V GK + VA+K++ E E EF+ E M N+ HE LV+L+G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ I+ +YM N L L + R +F E+ + + Y+ + +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L++ K+SDFGLS+ +D S + + P+ + + KS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 238 DIYSFGVLLLQIVT 251
DI++FGVL+ +I +
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 59 KVGEGGFGSVYKGKL------QDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++GEG FG V+ + QD +VAVK L S+ ++F E + + H+++V+
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLL-----------GEEKNRAKFSWTARREIALGI 161
G C EG ++V++YM++ L++ L GE+ +A +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL 220
A G+ Y+ VHRD+ N L+ Q KI DFG+S+ ++ D + R +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + +SD++SFGV+L +I T
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 59 KVGEGGFGSVYKGKL------QDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++GEG FG V+ + QD +VAVK L S+ ++F E + + H+++V+
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLL-----------GEEKNRAKFSWTARREIALGI 161
G C EG ++V++YM++ L++ L GE+ +A +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL 220
A G+ Y+ VHRD+ N L+ Q KI DFG+S+ ++ D + R +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + +SD++SFGV+L +I T
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V GK + VA+K++ E E EF+ E M N+ HE LV+L+G C
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ I+ +YM N L L + R +F E+ + + Y+ + +
Sbjct: 73 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 126
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L++ K+SDFGLS+ +D S + + P+ + + KS
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 238 DIYSFGVLLLQIVT 251
DI++FGVL+ +I +
Sbjct: 187 DIWAFGVLMWEIYS 200
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 44/283 (15%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V +G+L+ + VA+K L +++ +EF+SE + M H N+++L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G +I+ ++M+N +L L N +F+ + GIA G+ Y+ E
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFL---RLNDGQFTVIQLVGMLRGIASGMRYLAEM--- 137
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE---DITHISTRVAGTLG--YLAPDYAV 229
S VHRD+ NIL++ N K+SDFGLS+ E D T S+ + G + + AP+
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSS-LGGKIPIRWTAPEAIA 196
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HL 283
SD +S+G+++ ++++ GE W+M N D + L
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMS----------FGE----RPYWDMSNQDVINAIEQDYRL 242
Query: 284 VDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
P C ++ L C Q+ + RPR V+ ++
Sbjct: 243 PPPPDC-------PTSLHQLMLDCWQKDRNARPRFPQVVSALD 278
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V GK + VA+K++ E E EF+ E M N+ HE LV+L+G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ I+ +YM N L L + R +F E+ + + Y+ + +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 142
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L++ K+SDFGLS+ +D S + + P+ + + KS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 238 DIYSFGVLLLQIVT 251
DI++FGVL+ +I +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V GK + VA+K++ E E EF+ E M N+ HE LV+L+G C
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ I+ +YM N L L + R +F E+ + + Y+ + +
Sbjct: 69 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 122
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L++ K+SDFGLS+ +D S + + P+ + + KS
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 238 DIYSFGVLLLQIVT 251
DI++FGVL+ +I +
Sbjct: 183 DIWAFGVLMWEIYS 196
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V GK + VA+K++ E E EF+ E M N+ HE LV+L+G C
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ I+ +YM N L L + R +F E+ + + Y+ + +
Sbjct: 74 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 127
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L++ K+SDFGLS+ +D S + + P+ + + KS
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 238 DIYSFGVLLLQIVT 251
DI++FGVL+ +I +
Sbjct: 188 DIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V GK + VA+K++ E E EF+ E M N+ HE LV+L+G C
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ I+ +YM N L L + R +F E+ + + Y+ + +
Sbjct: 80 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 133
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L++ K+SDFGLS+ +D S + + P+ + + KS
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 238 DIYSFGVLLLQIVT 251
DI++FGVL+ +I +
Sbjct: 194 DIWAFGVLMWEIYS 207
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 21/211 (9%)
Query: 59 KVGEGGFGSVYKGKL------QDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++GEG FG V+ + QD +VAVK L S+ ++F E + + H+++V+
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLL-----------GEEKNRAKFSWTARREIALGI 161
G C EG ++V++YM++ L++ L GE+ +A +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL 220
A G+ Y+ VHRD+ N L+ Q KI DFG+S+ ++ D + R +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + +SD++SFGV+L +I T
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 95/194 (48%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V GK + VA+K++ E E EF+ E M N+ HE LV+L+G C
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ I+ +YM N L L + R +F E+ + + Y+ + +
Sbjct: 89 TKQRPIFIITEYMANGCLLNYL---REMRHRFQTQQLLEMCKDVCEAMEYLESK---QFL 142
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L++ K+SDFGLS+ +D S + + P+ + + KS
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 238 DIYSFGVLLLQIVT 251
DI++FGVL+ +I +
Sbjct: 203 DIWAFGVLMWEIYS 216
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ Y+ +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYLASK 151
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ ++ ++ + + L ++A +
Sbjct: 152 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 258
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 259 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 292
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 6/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V+ G + T VAVK L + F+ E M + H+ LV+L+
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 77
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I+ +YM SL L +E + + + IA G+AYI + + +
Sbjct: 78 TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RKNYI 132
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD++ +N+L+ ++ KI+DFGL+++ ++ + + AP+ G KS
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 192
Query: 238 DIYSFGVLLLQIVT 251
D++SFG+LL +IVT
Sbjct: 193 DVWSFGILLYEIVT 206
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ Y+ +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYLASK 144
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ ++ ++ + + L ++A +
Sbjct: 145 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 201
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 202 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 251
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 252 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 285
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ Y+ +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYLASK 147
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ ++ ++ + + L ++A +
Sbjct: 148 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 204
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 205 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 254
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 255 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 288
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ Y+ +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYLASK 151
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ ++ ++ + + L ++A +
Sbjct: 152 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 208
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 258
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 259 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 292
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ Y+ +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYLASK 171
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ ++ ++ + + L ++A +
Sbjct: 172 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 228
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 229 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 278
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 279 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 312
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ Y+ +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYLASK 152
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ ++ ++ + + L ++A +
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 259
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 260 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 109/203 (53%), Gaps = 15/203 (7%)
Query: 57 SNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGE--KEFMSEVASMANICHENLVKLH 114
S ++G G FG+VYKGK VAVK+L V E + F +EVA + H N++ L
Sbjct: 41 STRIGSGSFGTVYKGKWHGD--VAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LF 97
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + IV + + +SL + L +E KF +IA A+G+ Y+H +
Sbjct: 98 MGYMTKDNLAIVTQWCEGSSLYKHLHVQE---TKFQMFQLIDIARQTAQGMDYLHAK--- 151
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE-DITHISTRVAGTLGYLAPDYAVSGHL 233
+I+HRD+K +NI L + KI DFGL+ + + + G++ ++AP+
Sbjct: 152 NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDN 211
Query: 234 NP---KSDIYSFGVLLLQIVTGQ 253
NP +SD+YS+G++L +++TG+
Sbjct: 212 NPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ Y+ +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYLASK 152
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ ++ ++ + + L ++A +
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 209
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 259
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 260 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ Y+ +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYLASK 149
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ ++ ++ + + L ++A +
Sbjct: 150 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 206
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 207 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 256
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 257 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 290
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ Y+ +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYLASK 170
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ ++ ++ + + L ++A +
Sbjct: 171 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 227
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 228 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 277
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 278 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 311
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ Y+ +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKYLASK 150
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ ++ ++ + + L ++A +
Sbjct: 151 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL 207
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 257
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 258 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 291
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ ++ +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFLASK 152
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE---DITHISTRVAGTLGYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ + D H T + ++A +
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 259
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 260 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ ++ +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFLASK 150
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE---DITHISTRVAGTLGYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ + D H T + ++A +
Sbjct: 151 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 257
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 258 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 291
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ ++ +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFLASK 152
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE---DITHISTRVAGTLGYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ + D H T + ++A +
Sbjct: 153 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 259
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 260 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ ++ +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFLASK 153
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE---DITHISTRVAGTLGYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ + D H T + ++A +
Sbjct: 154 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 260
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 261 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 294
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ ++ +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFLASK 157
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE---DITHISTRVAGTLGYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ + D H T + ++A +
Sbjct: 158 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 264
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 265 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 298
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 133/282 (47%), Gaps = 40/282 (14%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 115 GGCI--EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHE 170
G C+ EG ++V YM++ L + E N T + I G +A+G+ ++
Sbjct: 157 GICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFLAS 210
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE---DITHISTRVAGTLGYLAPDY 227
+ VHRD+ N +LD+ F K++DFGL++ + D H T + ++A +
Sbjct: 211 K---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVD 285
+ KSD++SFGVLL +++T A + D + YL++ + L+
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQ 317
Query: 286 PMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
P C + +V L C K+ +RP S ++ I+
Sbjct: 318 PEYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 352
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 131/281 (46%), Gaps = 38/281 (13%)
Query: 60 VGEGGFGSVYKGKL--QDGTVV--AVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
+G G FG VY G L DG + AVK L+ + GE +F++E M + H N++ L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 115 GGCIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLAYIHEE 171
G C+ ++V YM++ L + E N T + I G +A+G+ ++ +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP-----TVKDLIGFGLQVAKGMKFLASK 153
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE---DITHISTRVAGTLGYLAPDYA 228
VHRD+ N +LD+ F K++DFGL++ + D H T + ++A +
Sbjct: 154 ---KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE--YYLVEKAWEMHNTDKLQHLVDP 286
+ KSD++SFGVLL +++T A + D + YL++ + L+ P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQG----------RRLLQP 260
Query: 287 MLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMING 327
C + +V L C K+ +RP S ++ I+
Sbjct: 261 EYCPD-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 294
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 98/194 (50%), Gaps = 6/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+G G FG V+ G + T VAVK L + F+ E M + H+ LV+L+
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVV 76
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ I+ ++M SL L +E + + + IA G+AYI + + +
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIE---RKNYI 131
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD++ +N+L+ ++ KI+DFGL+++ ++ + + AP+ G KS
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 238 DIYSFGVLLLQIVT 251
+++SFG+LL +IVT
Sbjct: 192 NVWSFGILLYEIVT 205
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 139/301 (46%), Gaps = 51/301 (16%)
Query: 61 GEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-EKEFMSEVASMANICHENLVKLHGGCIE 119
G FG V+K +L + VAVK+ ++ KQ + E+ EV S+ + HEN+++ G
Sbjct: 33 ARGRFGCVWKAQLLN-EYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEKR 89
Query: 120 GPC----RIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI--- 172
G ++ + + SLS L SW IA +ARGLAY+HE+I
Sbjct: 90 GTSVDVDLWLITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 173 ----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTR-VAGTLGYLAPDY 227
KP+I HRDIK N+LL N I+DFGL+ F + T GT Y+AP+
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE- 203
Query: 228 AVSGHLN------PKSDIYSFGVLLLQIVTGQAAVH---------FDKELGEYYLVEKAW 272
+ G +N + D+Y+ G++L ++ + A F++E+G++ +E
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQ 263
Query: 273 E--MHNTDK-------LQHLVDPMLCGNFS---GNEAVRFLKVGLLCVQEKSSLRPRMST 320
E +H + +H MLC ++A L G CV E+ + R++
Sbjct: 264 EVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAG--CVGERITQMQRLTN 321
Query: 321 V 321
+
Sbjct: 322 I 322
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 136
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 137 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 194 TESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 163
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 164 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 221 TESKFSVASDVWSFGVVLYELFT 243
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 132
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 133 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 190 TESKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 130
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 131 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 188 TESKFSVASDVWSFGVVLYELFT 210
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 129/283 (45%), Gaps = 44/283 (15%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V G L+ VA+K L S +++ ++F+SE + M H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G + +I+ ++M+N SL L +N +F+ + GIA G+ Y+ +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFL---RQNDGQFTVIQLVGMLRGIAAGMKYLADM--- 128
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG-----YLAPDYAV 229
+ VHR + NIL++ N K+SDFGLS+ F ED T T + G + AP+
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSR-FLEDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQ------HL 283
SD++S+G+++ ++++ Y W+M N D + L
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS--------------YGERPYWDMTNQDVINAIEQDYRL 233
Query: 284 VDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
PM C + ++ L C Q+ + RP+ ++ ++
Sbjct: 234 PPPMDCPS-------ALHQLMLDCWQKDRNHRPKFGQIVNTLD 269
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 138
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 139 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 196 TESKFSVASDVWSFGVVLYELFT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 131
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 132 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 189 TESKFSVASDVWSFGVVLYELFT 211
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 137
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 138 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 195 TESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 150
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 151 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 208 TESKFSVASDVWSFGVVLYELFT 230
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKV--LSVESKQGEKEFMSEVASMANICHENLVKLHG 115
KVGEG +G VYK K G +VA+K L E + + E++ + + H N+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
C +V+++M+ + L + L ++N+ + + + RG+A+ H+
Sbjct: 87 VIHSERCLTLVFEFMEKD-LKKVL---DENKTGLQDSQIKIYLYQLLRGVAHCHQH---R 139
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV-SGHLN 234
I+HRD+KP N+L++ + K++DFGL++ F + + V TL Y APD + S +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 235 PKSDIYSFGVLLLQIVTGQ 253
DI+S G + +++TG+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 104/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 139
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 140 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 197 TESKFSVASDVWSFGVVLYELFT 219
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 105/199 (52%), Gaps = 11/199 (5%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKV--LSVESKQGEKEFMSEVASMANICHENLVKLHG 115
KVGEG +G VYK K G +VA+K L E + + E++ + + H N+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
C +V+++M+ + L + L ++N+ + + + RG+A+ H+
Sbjct: 87 VIHSERCLTLVFEFMEKD-LKKVL---DENKTGLQDSQIKIYLYQLLRGVAHCHQH---R 139
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV-SGHLN 234
I+HRD+KP N+L++ + K++DFGL++ F + + V TL Y APD + S +
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 235 PKSDIYSFGVLLLQIVTGQ 253
DI+S G + +++TG+
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 105/202 (51%), Gaps = 15/202 (7%)
Query: 59 KVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKL 113
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 114 HGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
G C R ++ +++ SL + L +K++ + + I +G+ Y+ +
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL---QKHKERIDHIKLLQYTSQICKGMEYLGTK 136
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYAV 229
+HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 137 ---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 105/203 (51%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L +K++ + + I +G+ Y+
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QKHKERIDHIKLLQYTSQICKGMEYLGT 133
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HR++ NIL++ KI DFGL+K+ P+D + + G + + AP+
Sbjct: 134 K---RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 191 TESKFSVASDVWSFGVVLYELFT 213
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 128/260 (49%), Gaps = 36/260 (13%)
Query: 59 KVGEGGFGSVYKGKLQDG-TVVAVKVL----------SVESKQGEK---EFMSEVASMAN 104
K+G G +G V K ++G + A+KV+ S ++K EK E +E++ + +
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 105 ICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARG 164
+ H N++KL + +V ++ + L + ++ NR KF I I G
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII----NRHKFDECDAANIMKQILSG 158
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQN---FNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ Y+H K +IVHRDIKP NILL+ N KI DFGLS F +D + R+ GT
Sbjct: 159 ICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL-GTAY 213
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG--------QAAVHFDKELGEYYLVEKAWE 273
Y+AP+ + N K D++S GV++ ++ G + E G+YY W+
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWK 272
Query: 274 MHNTDKLQHLVDPMLCGNFS 293
+ +D+ + L+ ML +++
Sbjct: 273 -NISDEAKELIKLMLTYDYN 291
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+GEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V ++++ +L+ + N + + + L + + L+ +H + ++
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVI 138
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRDIK +ILL + K+SDFG +++ + GT ++AP+ P+
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEV 197
Query: 238 DIYSFGVLLLQIVTGQ 253
DI+S G++++++V G+
Sbjct: 198 DIWSLGIMVIEMVDGE 213
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+GEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V ++++ +L+ + N + + + L + + L+ +H + ++
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVI 142
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRDIK +ILL + K+SDFG +++ + GT ++AP+ P+
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEV 201
Query: 238 DIYSFGVLLLQIVTGQ 253
DI+S G++++++V G+
Sbjct: 202 DIWSLGIMVIEMVDGE 217
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 93/194 (47%), Gaps = 7/194 (3%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V GK + VAVK++ E E EF E +M + H LVK +G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ IV +Y+ N L L K + E+ + G+A++ +
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEP---SQLLEMCYDVCEGMAFLESH---QFI 126
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRD+ N L+D++ K+SDFG+++ +D S + + AP+ + KS
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 238 DIYSFGVLLLQIVT 251
D+++FG+L+ ++ +
Sbjct: 187 DVWAFGILMWEVFS 200
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+GEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V ++++ +L+ + N + + + L + + L+ +H + ++
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVI 147
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRDIK +ILL + K+SDFG +++ + GT ++AP+ P+
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEV 206
Query: 238 DIYSFGVLLLQIVTGQ 253
DI+S G++++++V G+
Sbjct: 207 DIWSLGIMVIEMVDGE 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+GEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V ++++ +L+ + N + + + L + + L+ +H + ++
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVI 149
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRDIK +ILL + K+SDFG +++ + GT ++AP+ P+
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEV 208
Query: 238 DIYSFGVLLLQIVTGQ 253
DI+S G++++++V G+
Sbjct: 209 DIWSLGIMVIEMVDGE 224
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 60 VGEGGFGSVYKGK------LQDGTVVAVKVLSVE-SKQGEKEFMSEVASMANICHENLVK 112
+GEG FG V++ + + T+VAVK+L E S + +F E A MA + N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLL------------GEEKNRAK--------FSWT 152
L G C G ++++YM L++ L + RA+ S
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 153 ARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITH 211
+ IA +A G+AY+ E VHRD+ N L+ +N KI+DFGLS+ ++ D
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 212 ISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A + ++ P+ +SD++++GV+L +I +
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 58 NKVGEGGFGSVYKGK---LQD--GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
++G+G FGSV + LQD G VVAVK L +++ ++F E+ + ++ H+N+VK
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 113 LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G C R ++ +Y+ SL L + + + + I +G+ Y+
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL---QAHAERIDHIKLLQYTSQICKGMEYLGT 135
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDYA 228
+ +HRD+ NIL++ KI DFGL+K+ P+D + G + + AP+
Sbjct: 136 K---RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ SD++SFGV+L ++ T
Sbjct: 193 TESKFSVASDVWSFGVVLYELFT 215
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+GEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V ++++ +L+ + N + + + L + + L+ +H + ++
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVI 192
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRDIK +ILL + K+SDFG +++ + GT ++AP+ P+
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEV 251
Query: 238 DIYSFGVLLLQIVTGQ 253
DI+S G++++++V G+
Sbjct: 252 DIWSLGIMVIEMVDGE 267
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK 93
+ F +E + A S ++G+G FG VY+G K + T VA+K ++ + E+
Sbjct: 4 DVFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 63
Query: 94 -EFMSEVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKNR-- 146
EF++E + M CH ++V+L G +G +++ + M L ++L E +N
Sbjct: 64 IEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 147 -AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-L 204
A S + ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++ +
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 179
Query: 205 FPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ D + + +++P+ G SD++SFGV+L +I T
Sbjct: 180 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 104/215 (48%), Gaps = 17/215 (7%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASM 102
K + F +G G FG V+ + +G A+KVL V KQ E E +
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHT-NDERLML 60
Query: 103 ANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
+ + H ++++ G + ++ DY++ L L + +F + A +
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL----RKSQRFPNPVAKFYAAEVC 116
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGY 222
L Y+H + I++RD+KP NILLD+N + KI+DFG +K P D+T+ + GT Y
Sbjct: 117 LALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP-DVTYX---LCGTPDY 169
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH 257
+AP+ + N D +SFG+L+ +++ G +
Sbjct: 170 IAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY 204
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 102/196 (52%), Gaps = 10/196 (5%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+GEG G V ++ G +VAVK + + +Q + +EV M + HEN+V+++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V ++++ +L+ + N + + + L + + L+ +H + ++
Sbjct: 218 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQ---GVI 269
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRDIK +ILL + K+SDFG +++ + GT ++AP+ P+
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKXLVGTPYWMAPELISRLPYGPEV 328
Query: 238 DIYSFGVLLLQIVTGQ 253
DI+S G++++++V G+
Sbjct: 329 DIWSLGIMVIEMVDGE 344
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 30/209 (14%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
+G GGFG V+K K + DG +K + +++ E+E V ++A + H N+V + GC
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVH-YNGCW 73
Query: 119 EG-----------------PCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGI 161
+G C I ++ +L Q + E++ K E+ I
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEKLDKVLALELFEQI 131
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+G+ YIH + +++RD+KPSNI L KI DFGL D R GTL
Sbjct: 132 TKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--XRSKGTLR 186
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIV 250
Y++P+ S + D+Y+ G++L +++
Sbjct: 187 YMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 115/231 (49%), Gaps = 27/231 (11%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK 93
+ + +E + A S ++G+G FG VY+G K + T VA+K ++ + E+
Sbjct: 7 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 94 -EFMSEVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKNR-- 146
EF++E + M CH ++V+L G +G +++ + M L ++L E +N
Sbjct: 67 IEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 147 -AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF 205
A S + ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 180
Query: 206 PEDITHISTRVAGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
DI G G +++P+ G SD++SFGV+L +I T
Sbjct: 181 --DIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 27/226 (11%)
Query: 45 NELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK-EFMS 97
+E + A S ++G+G FG VY+G K + T VA+K ++ + E+ EF++
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 98 EVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKNR---AKFS 150
E + M CH ++V+L G +G +++ + M L ++L E +N A S
Sbjct: 63 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 151 WTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT 210
+ ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++ DI
Sbjct: 122 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIX 174
Query: 211 HISTRVAGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
G G +++P+ G SD++SFGV+L +I T
Sbjct: 175 ETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 58/301 (19%)
Query: 61 GEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKL-----HG 115
G FG V+K +L + VAVK+ ++ KQ + E+ S + HENL++ G
Sbjct: 24 ARGRFGCVWKAQLMN-DFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRG 81
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI--- 172
+E +I + SL+ L G +W +A ++RGL+Y+HE++
Sbjct: 82 SNLEVELWLITA-FHDKGSLTDYLKGN-----IITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 173 -----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF----PEDITHISTRVAGTLGYL 223
KPSI HRD K N+LL + ++DFGL+ F P TH GT Y+
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYM 192
Query: 224 APDYAVSGHLN------PKSDIYSFGVLLLQIVTGQAA---------VHFDKELGEYYLV 268
AP+ + G +N + D+Y+ G++L ++V+ A + F++E+G++ +
Sbjct: 193 APE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAADGPVDEYMLPFEEEIGQHPSL 251
Query: 269 EKAWE------MHNTDKLQHLVDP---MLCGNFS---GNEAVRFLKVGLLCVQEKSSLRP 316
E+ E M T K L P LC ++A L G CV+E+ SL
Sbjct: 252 EELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAEARLSAG--CVEERVSLIR 309
Query: 317 R 317
R
Sbjct: 310 R 310
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 25/230 (10%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD------GTVVAVKVLSVESKQGEK 93
+ F +E + + ++G+G FG VY+G +D T VAVK ++ + E+
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 94 -EFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKN---R 146
EF++E + M ++V+L G +G ++V + M + L ++L E +N R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 147 AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFP 206
+ ++A IA G+AY++ + VHRD+ N ++ +F KI DFG+++
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--- 178
Query: 207 EDITHISTRVAGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
DI G G ++AP+ G SD++SFGV+L +I +
Sbjct: 179 -DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 112/230 (48%), Gaps = 25/230 (10%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD------GTVVAVKVLSVESKQGEK 93
+ F +E + + ++G+G FG VY+G +D T VAVK ++ + E+
Sbjct: 2 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 61
Query: 94 -EFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKN---R 146
EF++E + M ++V+L G +G ++V + M + L ++L E +N R
Sbjct: 62 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 121
Query: 147 AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFP 206
+ ++A IA G+AY++ + VHRD+ N ++ +F KI DFG+++
Sbjct: 122 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--- 175
Query: 207 EDITHISTRVAGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
DI G G ++AP+ G SD++SFGV+L +I +
Sbjct: 176 -DIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK 93
+ + +E + A S ++G+G FG VY+G K + T VA+K ++ + E+
Sbjct: 6 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 94 -EFMSEVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKNR-- 146
EF++E + M CH ++V+L G +G +++ + M L ++L E +N
Sbjct: 66 IEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 147 -AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-L 204
A S + ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++ +
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 205 FPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ D + + +++P+ G SD++SFGV+L +I T
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK 93
+ + +E + A S ++G+G FG VY+G K + T VA+K ++ + E+
Sbjct: 6 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 65
Query: 94 -EFMSEVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKNR-- 146
EF++E + M CH ++V+L G +G +++ + M L ++L E +N
Sbjct: 66 IEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 147 -AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-L 204
A S + ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++ +
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 205 FPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ D + + +++P+ G SD++SFGV+L +I T
Sbjct: 182 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK 93
+ + +E + A S ++G+G FG VY+G K + T VA+K ++ + E+
Sbjct: 13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 94 -EFMSEVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKNR-- 146
EF++E + M CH ++V+L G +G +++ + M L ++L E +N
Sbjct: 73 IEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 147 -AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-L 204
A S + ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++ +
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 205 FPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ D + + +++P+ G SD++SFGV+L +I T
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 43/222 (19%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
+G GGFG V+K K + DG ++ + +++ E+E V ++A + H N+V + GC
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVH-YNGCW 74
Query: 119 EG------------------------------PCRIIVYDYMQNNSLSQTLLGEEKNRAK 148
+G C I ++ +L Q + E++ K
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI--EKRRGEK 132
Query: 149 FSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPED 208
E+ I +G+ YIH + ++HRD+KPSNI L KI DFGL D
Sbjct: 133 LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 209 ITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIV 250
TR GTL Y++P+ S + D+Y+ G++L +++
Sbjct: 190 GKR--TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 51/290 (17%)
Query: 59 KVGEGGFGSVYKGKLQD------GTVVAVKVLSVESKQGEK-EFMSEVASMANICHENLV 111
++G+G FG VY+G +D T VAVK ++ + E+ EF++E + M ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKN---RAKFSWTARREIALGIARGL 165
+L G +G ++V + M + L ++L E +N R + ++A IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG---- 221
AY++ + VHRD+ N ++ +F KI DFG+++ DI G G
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGLLPV 196
Query: 222 -YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWE-MHNTDK 279
++AP+ G SD++SFGV+L +I + L E+ ++ + N
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQV 241
Query: 280 LQHLVDPMLCGNF---SGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
L+ ++D G + N R + +C Q ++RP T +E++N
Sbjct: 242 LKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPNMRP---TFLEIVN 284
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK 93
+ + +E + A S ++G+G FG VY+G K + T VA+K ++ + E+
Sbjct: 35 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 94
Query: 94 -EFMSEVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKNR-- 146
EF++E + M CH ++V+L G +G +++ + M L ++L E +N
Sbjct: 95 IEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 153
Query: 147 -AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-L 204
A S + ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++ +
Sbjct: 154 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 210
Query: 205 FPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ D + + +++P+ G SD++SFGV+L +I T
Sbjct: 211 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK 93
+ + +E + A S ++G+G FG VY+G K + T VA+K ++ + E+
Sbjct: 7 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 66
Query: 94 -EFMSEVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKNR-- 146
EF++E + M CH ++V+L G +G +++ + M L ++L E +N
Sbjct: 67 IEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 147 -AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-L 204
A S + ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++ +
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 205 FPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ D + + +++P+ G SD++SFGV+L +I T
Sbjct: 183 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 114/222 (51%), Gaps = 19/222 (8%)
Query: 45 NELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK-EFMS 97
+E + A S ++G+G FG VY+G K + T VA+K ++ + E+ EF++
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 98 EVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKNR---AKFS 150
E + M CH ++V+L G +G +++ + M L ++L E +N A S
Sbjct: 65 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 151 WTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDI 209
+ ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++ ++ D
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY 180
Query: 210 THISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ + +++P+ G SD++SFGV+L +I T
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 60 VGEGGFGSVYKGKL--QDGTV--VAVKVLSVE-SKQGE-KEFMSEVASMANICHENLVKL 113
+GEG FGSV +G L +DGT VAVK + ++ S Q E +EF+SE A M + H N+++L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 114 HGGCIEG-----PCRIIVYDYMQNNSLSQTLLGE--EKNRAKFSWTARREIALGIARGLA 166
G CIE P +++ +M+ L LL E + + IA G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT-LGYLAP 225
Y+ + +HRD+ N +L + ++DFGLSK + R+A + ++A
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ KSD+++FGV + +I T
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 142/305 (46%), Gaps = 43/305 (14%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD------GTVVAVKVLSVESKQGEK 93
+ F +E + + ++G+G FG VY+G +D T VAVK ++ + E+
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 94 -EFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKN---R 146
EF++E + M ++V+L G +G ++V + M + L ++L E +N R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 147 AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LF 205
+ ++A IA G+AY++ + VHRD+ N ++ +F KI DFG+++ ++
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
Query: 206 PEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
D + + ++AP+ G SD++SFGV+L +I +
Sbjct: 182 ETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS-------------- 227
Query: 266 YLVEKAWE-MHNTDKLQHLVDPMLCGNF---SGNEAVRFLKVGLLCVQEKSSLRPRMSTV 321
L E+ ++ + N L+ ++D G + N R + +C Q +RP T
Sbjct: 228 -LAEQPYQGLSNEQVLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRP---TF 279
Query: 322 IEMIN 326
+E++N
Sbjct: 280 LEIVN 284
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 142/309 (45%), Gaps = 51/309 (16%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD------GTVVAVKVLSVESKQGEK 93
+ F +E + + ++G+G FG VY+G +D T VAVK ++ + E+
Sbjct: 5 SVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRER 64
Query: 94 -EFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKN---R 146
EF++E + M ++V+L G +G ++V + M + L ++L E +N R
Sbjct: 65 IEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGR 124
Query: 147 AKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFP 206
+ ++A IA G+AY++ + VHRD+ N ++ +F KI DFG+++
Sbjct: 125 PPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR--- 178
Query: 207 EDITHISTRVAGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
DI + G G ++AP+ G SD++SFGV+L +I +
Sbjct: 179 -DIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS---------- 227
Query: 262 LGEYYLVEKAWE-MHNTDKLQHLVDPMLCGNF---SGNEAVRFLKVGLLCVQEKSSLRPR 317
L E+ ++ + N L+ ++D G + N R + +C Q +RP
Sbjct: 228 -----LAEQPYQGLSNEQVLKFVMD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRP- 277
Query: 318 MSTVIEMIN 326
T +E++N
Sbjct: 278 --TFLEIVN 284
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 136/286 (47%), Gaps = 43/286 (15%)
Query: 59 KVGEGGFGSVYKGKLQD------GTVVAVKVLSVESKQGEK-EFMSEVASMANICHENLV 111
++G+G FG VY+G +D T VAVK ++ + E+ EF++E + M ++V
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKN---RAKFSWTARREIALGIARGL 165
+L G +G ++V + M + L ++L E +N R + ++A IA G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLA 224
AY++ + VHRD+ N ++ +F KI DFG+++ ++ D + + ++A
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 199
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWE-MHNTDKLQHL 283
P+ G SD++SFGV+L +I + L E+ ++ + N L+ +
Sbjct: 200 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 244
Query: 284 VDPMLCGNF---SGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
+D G + N R + +C Q +RP T +E++N
Sbjct: 245 MD----GGYLDQPDNCPERVTDLMRMCWQFNPKMRP---TFLEIVN 283
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 19/227 (8%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK 93
+ + +E + A S ++G+G FG VY+G K + T VA+K ++ + E+
Sbjct: 13 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 72
Query: 94 -EFMSEVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTL------LGEEKN 145
EF++E + M CH ++V+L G +G +++ + M L L +
Sbjct: 73 IEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 146 RAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-L 204
A S + ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++ +
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 205 FPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ D + + +++P+ G SD++SFGV+L +I T
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 19/227 (8%)
Query: 40 NAFSYNELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK 93
+ + +E + A S ++G+G FG VY+G K + T VA+K ++ + E+
Sbjct: 3 DVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRER 62
Query: 94 -EFMSEVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTL------LGEEKN 145
EF++E + M CH ++V+L G +G +++ + M L L +
Sbjct: 63 IEFLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 146 RAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-L 204
A S + ++A IA G+AY++ VHRD+ N ++ ++F KI DFG+++ +
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
Query: 205 FPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ D + + +++P+ G SD++SFGV+L +I T
Sbjct: 179 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 54 FCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANICHEN 109
F +G+G FG+VY + Q ++A+KVL +E E + EV +++ H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 110 LVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
+++L+G + ++ +Y ++ + L + ++F +A L+Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCH 129
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
+ ++HRDIKP N+LL N KI+DFG S P + T + GTL YL P+
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEMIE 183
Query: 230 SGHLNPKSDIYSFGVLLLQIVTG 252
+ K D++S GVL + + G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 20/205 (9%)
Query: 60 VGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
+G+G FG K + G V+ +K L ++ ++ F+ EV M + H N++K G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ + +Y++ +L + + +++ W+ R A IA G+AY+H +I+H
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSMD---SQYPWSQRVSFAKDIASGMAYLHSM---NIIH 131
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLF------PEDITHIST-------RVAGTLGYLAP 225
RD+ N L+ +N N ++DFGL++L PE + + V G ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIV 250
+ + K D++SFG++L +I+
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 99/196 (50%), Gaps = 10/196 (5%)
Query: 59 KVGEGGFGSV-YKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+GEG G V + G VAVK + + +Q + +EV M + H+N+V ++
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V ++++ +L+ + N + + + L + R L+Y+H + ++
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQ---GVI 163
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRDIK +ILL + K+SDFG +++ + GT ++AP+ +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPK-RKXLVGTPYWMAPEVISRLPYGTEV 222
Query: 238 DIYSFGVLLLQIVTGQ 253
DI+S G+++++++ G+
Sbjct: 223 DIWSLGIMVIEMIDGE 238
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 131/288 (45%), Gaps = 35/288 (12%)
Query: 37 KNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEF 95
++++ + L+ F VG G +G VYKG+ ++ G + A+KV+ V + E+E
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEI 67
Query: 96 MSEVASMANICH-ENLVKLHGGCIE-GPCRI-----IVYDYMQNNSLSQTLLGEEKNRAK 148
E+ + H N+ +G I+ P + +V ++ S++ + + N K
Sbjct: 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLK 127
Query: 149 FSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPED 208
W A I I RGL+++H+ ++HRDIK N+LL +N K+ DFG+S
Sbjct: 128 EEWIAY--ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT 182
Query: 209 ITHISTRVAGTLGYLAPDYAVSGHLNP------KSDIYSFGVLLLQIVTGQAAVHFDKEL 262
+ +T + GT ++AP+ ++ NP KSD++S G+ +++ G + +
Sbjct: 183 VGRRNTFI-GTPYWMAPE-VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM 240
Query: 263 GEYYLV---------EKAWEMHNTDKLQHLVDPMLCGNFSGNEAVRFL 301
+L+ K W + K Q ++ L N S A L
Sbjct: 241 RALFLIPRNPAPRLKSKKW----SKKFQSFIESCLVKNHSQRPATEQL 284
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 113/222 (50%), Gaps = 19/222 (8%)
Query: 45 NELKSATNGFCSSNKVGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEK-EFMS 97
+E + A S ++G+G FG VY+G K + T VA+K ++ + E+ EF++
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 98 EVASMANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKNR---AKFS 150
E + M CH ++V+L G +G +++ + M L ++L E +N A S
Sbjct: 65 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 151 WTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDI 209
+ ++A IA G+AY++ VHRD+ N + ++F KI DFG+++ ++ D
Sbjct: 124 LSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY 180
Query: 210 THISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ + +++P+ G SD++SFGV+L +I T
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y + + L + +KF +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELANAL 126
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 180
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+ R
Sbjct: 103 IINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXK 214
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTXLCGTLDYLPP 175
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 124
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 178
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 109/225 (48%), Gaps = 12/225 (5%)
Query: 59 KVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+G+G G+VY + G VA++ ++++ + ++ ++E+ M + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V +Y+ SL+ + + + + R + + L ++H ++
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---QVI 138
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HRDIK NILL + + K++DFG + + ST V GT ++AP+ PK
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 238 DIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEK--AWEMHNTDKL 280
DI+S G++ ++++ G+ + L YL+ E+ N +KL
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 41/236 (17%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
+G+G FG V K + D A+K + +++ +SEV +A++ H+ +V+ + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 119 E-------------GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFS-WTARREIALGIARG 164
E I +Y +N +L + E N+ + W R+I
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----EA 128
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE--DITHIS--------- 213
L+YIH + I+HRD+KP NI +D++ N KI DFGL+K DI +
Sbjct: 129 LSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 214 --TRVAGTLGYLAPDYAV-SGHLNPKSDIYSFGVLLLQIV----TGQAAVHFDKEL 262
T GT Y+A + +GH N K D+YS G++ +++ TG V+ K+L
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKL 241
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTELCGTLDYLPP 175
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 120
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 121 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 174
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 202
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 58 NKVGEGGFGSVYKGKLQD-----GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
+++G+G FGSV + G +VAVK L +++F E+ + + H + +
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIV 74
Query: 113 LHGGCIEGPCRI---IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
+ G GP R +V +Y+ + L L +++RA+ + + I +G+ Y+
Sbjct: 75 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDY 227
VHRD+ NIL++ + KI+DFGL+KL P D + R G + + AP+
Sbjct: 132 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVT 251
+ +SD++SFGV+L ++ T
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 58 NKVGEGGFGSVYKGKLQD-----GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
+++G+G FGSV + G +VAVK L +++F E+ + + H + +
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIV 75
Query: 113 LHGGCIEGPCRI---IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
+ G GP R +V +Y+ + L L +++RA+ + + I +G+ Y+
Sbjct: 76 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDY 227
VHRD+ NIL++ + KI+DFGL+KL P D + R G + + AP+
Sbjct: 133 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVT 251
+ +SD++SFGV+L ++ T
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K T VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L E ++S+
Sbjct: 96 IINLLGACTQDGPLYVIV-EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
A +ARG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ DI HI
Sbjct: 155 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 207
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVLL +I T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 58 NKVGEGGFGSVYKGKLQD-----GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
+++G+G FGSV + G +VAVK L +++F E+ + + H + +
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIV 87
Query: 113 LHGGCIEGPCRI---IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
+ G GP R +V +Y+ + L L +++RA+ + + I +G+ Y+
Sbjct: 88 KYRGVSYGPGRQSLRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDY 227
VHRD+ NIL++ + KI+DFGL+KL P D + R G + + AP+
Sbjct: 145 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVT 251
+ +SD++SFGV+L ++ T
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 125
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 126 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 179
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 207
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 114/250 (45%), Gaps = 19/250 (7%)
Query: 54 FCSSNKVGEGGFGSVYKGK-LQDGTVVAVK---VLSVESKQGEKEFMSEVASMANICHEN 109
F K+G G F VY+ L DG VA+K + + + + + E+ + + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 110 LVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
++K + IE IV + LS+ + +K + + + + L ++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
++HRDIKP+N+ + K+ D GL + F T + V GT Y++P+
Sbjct: 154 SR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSPERIH 209
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEM--------HNTDKLQ 281
N KSDI+S G LL ++ Q+ + DK + Y L +K + H +++L+
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDK-MNLYSLCKKIEQCDYPPLPSDHYSEELR 268
Query: 282 HLVDPMLCGN 291
LV+ +C N
Sbjct: 269 QLVN--MCIN 276
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 122
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T ++GTL YL P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSCHAP---SSRRTTLSGTLDYLPP 176
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPP 175
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPP 175
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 118
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 119 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 172
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 200
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 110/236 (46%), Gaps = 41/236 (17%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
+G+G FG V K + D A+K + +++ +SEV +A++ H+ +V+ + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 119 E-------------GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFS-WTARREIALGIARG 164
E I +Y +N +L + E N+ + W R+I
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL----EA 128
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE--DITHIS--------- 213
L+YIH + I+HRD+KP NI +D++ N KI DFGL+K DI +
Sbjct: 129 LSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 214 --TRVAGTLGYLAPDYAV-SGHLNPKSDIYSFGVLLLQIV----TGQAAVHFDKEL 262
T GT Y+A + +GH N K D+YS G++ +++ TG V+ K+L
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKL 241
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 111/226 (49%), Gaps = 14/226 (6%)
Query: 59 KVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+G+G G+VY + G VA++ ++++ + ++ ++E+ M + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V +Y+ SL+ + + + + R + + L ++H ++
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---QVI 138
Query: 178 HRDIKPSNILLDQNFNPKISDFGL-SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPK 236
HRDIK NILL + + K++DFG +++ PE + + GT ++AP+ PK
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAYGPK 196
Query: 237 SDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEK--AWEMHNTDKL 280
DI+S G++ ++++ G+ + L YL+ E+ N +KL
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 122
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPP 176
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 124
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 178
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 126
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 180
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 126
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPP 180
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 126
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 180
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K T VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L +FS+
Sbjct: 96 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVS 154
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
A +ARG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ DI HI
Sbjct: 155 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXK 207
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVLL +I T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 175
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+ R
Sbjct: 103 IITLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYK 214
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 59 KVGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+GEG G V + + G VAVK++ + +Q + +EV M + H N+V+++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 118 IEGPCRIIVYDYMQNNSL----SQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
+ G ++ +++Q +L SQ L EE+ + + + LAY+H +
Sbjct: 112 LVGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT---------VCEAVLQALAYLHAQ-- 160
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
++HRDIK +ILL + K+SDFG +D+ + GT ++AP+
Sbjct: 161 -GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK-RKXLVGTPYWMAPEVISRSLY 218
Query: 234 NPKSDIYSFGVLLLQIVTGQ 253
+ DI+S G++++++V G+
Sbjct: 219 ATEVDIWSLGIMVIEMVDGE 238
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 137/286 (47%), Gaps = 43/286 (15%)
Query: 59 KVGEGGFGSVYKGKLQD------GTVVAVKVLSVESKQGEK-EFMSEVASMANICHENLV 111
++G+G FG VY+G +D T VAVK ++ + E+ EF++E + M ++V
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKN---RAKFSWTARREIALGIARGL 165
+L G +G ++V + M + L ++L E +N R + ++A IA G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLA 224
AY++ + VHR++ N ++ +F KI DFG+++ ++ D + + ++A
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 201
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWE-MHNTDKLQHL 283
P+ G SD++SFGV+L +I + L E+ ++ + N L+ +
Sbjct: 202 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 246
Query: 284 VDPMLCGNF---SGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
+D G + N R + +C Q ++RP T +E++N
Sbjct: 247 MD----GGYLDQPDNCPERVTDLMRMCWQFNPNMRP---TFLEIVN 285
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 111/226 (49%), Gaps = 14/226 (6%)
Query: 59 KVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+G+G G+VY + G VA++ ++++ + ++ ++E+ M + N+V
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V +Y+ SL+ + + + + R + + L ++H ++
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---QVI 138
Query: 178 HRDIKPSNILLDQNFNPKISDFGL-SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPK 236
HRDIK NILL + + K++DFG +++ PE + + GT ++AP+ PK
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPK 196
Query: 237 SDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEK--AWEMHNTDKL 280
DI+S G++ ++++ G+ + L YL+ E+ N +KL
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 137/286 (47%), Gaps = 43/286 (15%)
Query: 59 KVGEGGFGSVYKGKLQD------GTVVAVKVLSVESKQGEK-EFMSEVASMANICHENLV 111
++G+G FG VY+G +D T VAVK ++ + E+ EF++E + M ++V
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLS---QTLLGEEKN---RAKFSWTARREIALGIARGL 165
+L G +G ++V + M + L ++L E +N R + ++A IA G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLA 224
AY++ + VHR++ N ++ +F KI DFG+++ ++ D + + ++A
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMA 200
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWE-MHNTDKLQHL 283
P+ G SD++SFGV+L +I + L E+ ++ + N L+ +
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS---------------LAEQPYQGLSNEQVLKFV 245
Query: 284 VDPMLCGNF---SGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
+D G + N R + +C Q ++RP T +E++N
Sbjct: 246 MD----GGYLDQPDNCPERVTDLMRMCWQFNPNMRP---TFLEIVN 284
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+ R
Sbjct: 103 IIHLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYK 214
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 111/226 (49%), Gaps = 14/226 (6%)
Query: 59 KVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+G+G G+VY + G VA++ ++++ + ++ ++E+ M + N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V +Y+ SL+ + + + + R + + L ++H ++
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---QVI 139
Query: 178 HRDIKPSNILLDQNFNPKISDFGL-SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPK 236
HRDIK NILL + + K++DFG +++ PE + + GT ++AP+ PK
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGPK 197
Query: 237 SDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEK--AWEMHNTDKL 280
DI+S G++ ++++ G+ + L YL+ E+ N +KL
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+ R
Sbjct: 103 IINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYK 214
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 138
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 139 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 192
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 220
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+ R
Sbjct: 103 IINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYK 214
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 215 NTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 101/204 (49%), Gaps = 17/204 (8%)
Query: 58 NKVGEGGFGSVYKGKLQD-----GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
+++G+G FGSV + G +VAVK L +++F E+ + + H + +
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIV 71
Query: 113 LHGGCIEGPCRI---IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
+ G GP R +V +Y+ + L L +++RA+ + + I +G+ Y+
Sbjct: 72 KYRGVSYGPGRPELRLVMEYLPSGCLRDFL---QRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDY 227
VHRD+ NIL++ + KI+DFGL+KL P D R G + + AP+
Sbjct: 129 SR---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPES 185
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVT 251
+ +SD++SFGV+L ++ T
Sbjct: 186 LSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 147
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + T + GTL YL P
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 201
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 18/210 (8%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYL 223
+Y H + ++HRDIKP N+LL KI+DFG S P S R A GTL YL
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYL 173
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
P+ + K D++S GVL + + G+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 38/218 (17%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSE--VASMANICHENLVKLHGG- 116
+G G +G+VYKG L D VAVKV S ++Q F++E + + + H+N+ + G
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIARFIVGD 76
Query: 117 ---CIEGPCR-IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
+G ++V +Y N SL + L + W + +A + RGLAY+H E+
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLHTEL 131
Query: 173 ------KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-------PEDITHISTRVAGT 219
KP+I HRD+ N+L+ + ISDFGLS P + + + GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 220 LGYLAPDYAVSGHLNPKS--------DIYSFGVLLLQI 249
+ Y+AP+ + G +N + D+Y+ G++ +I
Sbjct: 192 IRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+ R
Sbjct: 103 IINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N +I+DFGL++ DI +I
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLAR----DINNIDYYK 214
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 54 FCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANICHEN 109
F +G+G FG+VY + Q ++A+KVL +E E + EV +++ H N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 110 LVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
+++L+G + ++ +Y ++ + L + ++F +A L+Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSRFDEQRTATYITELANALSYCH 129
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
+ ++HRDIKP N+LL N KI+DFG S P + + GTL YL P+
Sbjct: 130 SK---RVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRDTLCGTLDYLPPEMIE 183
Query: 230 SGHLNPKSDIYSFGVLLLQIVTG 252
+ K D++S GVL + + G
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVG 206
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 13/213 (6%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQG-EKEFMSEVASMA 103
ELK + F +++G G G V K + + G ++A K++ +E K + + E+ +
Sbjct: 12 ELKD--DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLH 69
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
+V +G I ++M SL Q L K + ++++ + R
Sbjct: 70 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KEAKRIPEEILGKVSIAVLR 125
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
GLAY+ E K I+HRD+KPSNIL++ K+ DFG+S I ++ GT Y+
Sbjct: 126 GLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYM 180
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAV 256
AP+ H + +SDI+S G+ L+++ G+ +
Sbjct: 181 APERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y + + L + +KF +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL----QKLSKFDEQRTATYITELANAL 126
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + + GTL YL P
Sbjct: 127 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLXGTLDYLPP 180
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 208
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+ R
Sbjct: 92 IINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 150
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 151 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYK 203
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 204 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+ R
Sbjct: 90 IINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 148
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 149 CTYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLAR----DINNIDYYK 201
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 202 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+ R
Sbjct: 95 IINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 153
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 154 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYK 206
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 207 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQDGT-VVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + ++ ++A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYL 223
+Y H + ++HRDIKP N+LL KI+DFG S P S R A GTL YL
Sbjct: 122 SYCHSK---KVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYL 173
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
P+ + K D++S GVL + + G+
Sbjct: 174 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV Y +L + L ++S+ R
Sbjct: 103 IINLLGACTQDGPLYVIVA-YASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYK 214
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K T VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+
Sbjct: 137 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
A +ARG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ DI HI
Sbjct: 196 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 248
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVLL +I T
Sbjct: 249 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L + S+ R
Sbjct: 103 IINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVS 161
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDXXK 214
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 124
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + + GTL YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTLDYLPP 178
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 17/195 (8%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIE 119
+G+G FG V G + G VAVK +++ + F++E + M + H NLV+L G +E
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 120 GPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ IV +YM SL L + R+ + +L + + Y+ + VH
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 131
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTL--GYLAPDYAVSGHLNPK 236
RD+ N+L+ ++ K+SDFGL+K ST+ G L + AP+ + K
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREAAFSTK 185
Query: 237 SDIYSFGVLLLQIVT 251
SD++SFG+LL +I +
Sbjct: 186 SDVWSFGILLWEIYS 200
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 108/216 (50%), Gaps = 39/216 (18%)
Query: 59 KVGEGGFGSVYKGKLQ-DGTVVAVKVL--SVESKQGEKEFMSEVASMANICHENLVKLHG 115
++G G +GSV K + G ++AVK + +V+ K+ ++ M M + +V+ +G
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYG 88
Query: 116 GCI-EGPCRIIV----------YDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGI 161
EG C I + Y Y+ ++ + + +LG+ I L
Sbjct: 89 ALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGK--------------ITLAT 134
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG 221
+ L ++ E +K I+HRDIKPSNILLD++ N K+ DFG+S + I TR AG
Sbjct: 135 VKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA--KTRDAGCRP 190
Query: 222 YLAPDY----AVSGHLNPKSDIYSFGVLLLQIVTGQ 253
Y+AP+ A + +SD++S G+ L ++ TG+
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 18/210 (8%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 124
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYL 223
+Y H + ++HRDIKP N+LL KI+DFG S P S R A GTL YL
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPS-----SRRAALCGTLDYL 176
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
P+ + K D++S GVL + + G+
Sbjct: 177 PPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 109/225 (48%), Gaps = 12/225 (5%)
Query: 59 KVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
K+G+G G+VY + G VA++ ++++ + ++ ++E+ M + N+V
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ G +V +Y+ SL+ + + + + R + + L ++H ++
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECL-----QALEFLHSN---QVI 139
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKS 237
HR+IK NILL + + K++DFG + + ST V GT ++AP+ PK
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 238 DIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEK--AWEMHNTDKL 280
DI+S G++ ++++ G+ + L YL+ E+ N +KL
Sbjct: 199 DIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 106/220 (48%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+ R
Sbjct: 149 IINLLGACTQDGPLYVIV-EYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 207
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 208 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYK 260
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 261 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGE---KEFMSEVASMANICHENLVKLHG 115
K+GEG +G VYK + G A+K + +E K+ E + E++ + + H N+VKL+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
++V++++ + L + L + + L + G+AY H+
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV-SGHLN 234
++HRD+KP N+L+++ KI+DFGL++ F + + V TL Y APD + S +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYS 179
Query: 235 PKSDIYSFGVLLLQIVTG 252
DI+S G + ++V G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 121
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + + GTL YL P
Sbjct: 122 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTLDYLPP 175
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 203
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K T VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+
Sbjct: 88 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 146
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
A +ARG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ DI HI
Sbjct: 147 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 199
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVLL +I T
Sbjct: 200 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K T VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+
Sbjct: 89 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 147
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
A +ARG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ DI HI
Sbjct: 148 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 200
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVLL +I T
Sbjct: 201 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K T VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+
Sbjct: 85 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 143
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
A +ARG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ DI HI
Sbjct: 144 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 196
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVLL +I T
Sbjct: 197 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K ++ VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV Y +L + L ++S+ R
Sbjct: 103 IINLLGACTQDGPLYVIV-GYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ARG+ Y+ + +HRD+ N+L+ +N KI+DFGL++ DI +I
Sbjct: 162 CTYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDYYK 214
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVL+ +I T
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGE---KEFMSEVASMANICHENLVKLHG 115
K+GEG +G VYK + G A+K + +E K+ E + E++ + + H N+VKL+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
++V++++ + L + L + + L + G+AY H+
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV-SGHLN 234
++HRD+KP N+L+++ KI+DFGL++ F + + V TL Y APD + S +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYRAPDVLMGSKKYS 179
Query: 235 PKSDIYSFGVLLLQIVTG 252
DI+S G + ++V G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 17/195 (8%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIE 119
+G+G FG V G + G VAVK +++ + F++E + M + H NLV+L G +E
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 120 GPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ IV +YM SL L + R+ + +L + + Y+ + VH
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 140
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTL--GYLAPDYAVSGHLNPK 236
RD+ N+L+ ++ K+SDFGL+K ST+ G L + AP+ + K
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTK 194
Query: 237 SDIYSFGVLLLQIVT 251
SD++SFG+LL +I +
Sbjct: 195 SDVWSFGILLWEIYS 209
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 105/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K T VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++S+
Sbjct: 96 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 154
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
A +ARG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ DI HI
Sbjct: 155 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 207
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVLL +I T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 17/195 (8%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIE 119
+G+G FG V G + G VAVK +++ + F++E + M + H NLV+L G +E
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 120 GPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ IV +YM SL L + R+ + +L + + Y+ + VH
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 125
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTL--GYLAPDYAVSGHLNPK 236
RD+ N+L+ ++ K+SDFGL+K ST+ G L + AP+ + K
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTK 179
Query: 237 SDIYSFGVLLLQIVT 251
SD++SFG+LL +I +
Sbjct: 180 SDVWSFGILLWEIYS 194
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 123
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + + GTL YL P
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTLDYLPP 177
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 124
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI++FG S P + T + GTL YL P
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTLDYLPP 178
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 8/197 (4%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVES-KQGEKEFM-SEVASMANICHENLVKLHGG 116
+G G +G K + + DG ++ K L S + EK+ + SEV + + H N+V+ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 117 CIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFS--WTARREIALGIARGLAYIHEEI 172
I+ IV +Y + L+ + K R + R L +A + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGH 232
+++HRD+KP+N+ LD N K+ DFGL+++ D + T V GT Y++P+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNRMS 192
Query: 233 LNPKSDIYSFGVLLLQI 249
N KSDI+S G LL ++
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 110/221 (49%), Gaps = 33/221 (14%)
Query: 60 VGEGGFGSVYKG-----KLQDG-TVVAVKVLSVESKQGE-KEFMSEVASMANICHENLVK 112
+GEG FG V K K + G T VAVK+L + E ++ +SE + + H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 113 LHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEK------------NRAKFSWTARREIAL 159
L+G C + GP +IV +Y + SL L K N + R + +
Sbjct: 91 LYGACSQDGPLLLIV-EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 160 G--------IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDIT 210
G I++G+ Y+ E S+VHRD+ NIL+ + KISDFGLS+ ++ ED
Sbjct: 150 GDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 211 HISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ + ++A + +SD++SFGVLL +IVT
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 122
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + + GTL YL P
Sbjct: 123 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDTLCGTLDYLPP 176
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 204
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 134/281 (47%), Gaps = 27/281 (9%)
Query: 45 NELKSATNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMA 103
N + F ++G+G FG V+KG + VVA+K++ +E + E E + + ++
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 104 NICHENLV-KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
+ C + V K +G ++G I+ +Y+ S L + + + T +EI
Sbjct: 76 SQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIA-TMLKEIL---- 130
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGY 222
+GL Y+H E K +HRDIK +N+LL + + K++DFG++ + +T V GT +
Sbjct: 131 KGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFW 186
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQH 282
+AP+ + K+DI+S G+ +++ G+ + +L+ K +N
Sbjct: 187 MAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPK----NNP----- 237
Query: 283 LVDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIE 323
P L G+F+ + F + C+ + S RP +++
Sbjct: 238 ---PTLVGDFTKS----FKEFIDACLNKDPSFRPTAKELLK 271
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 101/198 (51%), Gaps = 13/198 (6%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGE---KEFMSEVASMANICHENLVKLHG 115
K+GEG +G VYK + G A+K + +E K+ E + E++ + + H N+VKL+
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLE-KEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
++V++++ + L + L + + L + G+AY H+
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDR---R 120
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV-SGHLN 234
++HRD+KP N+L+++ KI+DFGL++ F + + + TL Y APD + S +
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYRAPDVLMGSKKYS 179
Query: 235 PKSDIYSFGVLLLQIVTG 252
DI+S G + ++V G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 123
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI++FG S P + T + GTL YL P
Sbjct: 124 SYCHSK---RVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTLDYLPP 177
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 205
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC 106
K F K+GEG +GSVYK + G +VA+K + VES +E + E++ M
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL--QEIIKEISIMQQCD 82
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIAL---GIAR 163
++VK +G + IV +Y S+S + R + EIA +
Sbjct: 83 SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDII------RLRNKTLTEDEIATILQSTLK 136
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
GL Y+H K +HRDIK NILL+ + K++DFG++ D V GT ++
Sbjct: 137 GLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXVIGTPFWM 192
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
AP+ N +DI+S G+ +++ G+
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 39/269 (14%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLV------- 111
+G+G FG V++GK + G VAVK+ S S++ F +E+ + HEN++
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 67
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K +G + +V DY ++ SL L NR + ++AL A GLA++H E
Sbjct: 68 KDNGTWTQ---LWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 119
Query: 172 I-----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF---PEDITHISTRVAGTLGYL 223
I KP+I HRD+K NIL+ +N I+D GL+ + I GT Y+
Sbjct: 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 179
Query: 224 APDYAVSGHLNPK-------SDIYSFGVLLLQIV--TGQAAVHFDKELGEYYLVEKAWEM 274
AP+ + +N K +DIY+ G++ +I +H D +L Y LV +
Sbjct: 180 APE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238
Query: 275 HNTDKL--QHLVDPMLCGNFSGNEAVRFL 301
K+ + + P + + EA+R +
Sbjct: 239 EEMRKVVCEQKLRPNIPNRWQSCEALRVM 267
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 98/195 (50%), Gaps = 17/195 (8%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIE 119
+G+G FG V G + G VAVK +++ + F++E + M + H NLV+L G +E
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 120 GPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+ IV +YM SL L + R+ + +L + + Y+ + VH
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYL--RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 312
Query: 179 RDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTL--GYLAPDYAVSGHLNPK 236
RD+ N+L+ ++ K+SDFGL+K ST+ G L + AP+ + K
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK------EASSTQDTGKLPVKWTAPEALREKKFSTK 366
Query: 237 SDIYSFGVLLLQIVT 251
SD++SFG+LL +I +
Sbjct: 367 SDVWSFGILLWEIYS 381
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 20/211 (9%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 124
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTR---VAGTLGY 222
+Y H + ++HRDIKP N+LL KI+DFG S P S+R + GTL Y
Sbjct: 125 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP------SSRRDDLCGTLDY 175
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
L P+ + K D++S GVL + + G+
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 206
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Query: 58 NKVGEGGFG-SVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLH 114
K+GEG FG ++ +DG +K +++ S + +E EVA +AN+ H N+V+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
E IV DY + L + + ++ F + + I L ++H+
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVHDR--- 144
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRDIK NI L ++ ++ DFG++++ + ++ GT YL+P+ + N
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-ELARACIGTPYYLSPEICENKPYN 203
Query: 235 PKSDIYSFGVLLLQIVTGQAA 255
KSDI++ G +L ++ T + A
Sbjct: 204 NKSDIWALGCVLYELCTLKHA 224
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 39/269 (14%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLV------- 111
+G+G FG V++GK + G VAVK+ S S++ F +E+ + HEN++
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 106
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K +G + +V DY ++ SL L NR + ++AL A GLA++H E
Sbjct: 107 KDNGTWTQ---LWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 158
Query: 172 I-----KPSIVHRDIKPSNILLDQNFNPKISDFGLS---KLFPEDITHISTRVAGTLGYL 223
I KP+I HRD+K NIL+ +N I+D GL+ + I GT Y+
Sbjct: 159 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 218
Query: 224 APDYAVSGHLNPK-------SDIYSFGVLLLQIVT--GQAAVHFDKELGEYYLVEKAWEM 274
AP+ + +N K +DIY+ G++ +I +H D +L Y LV +
Sbjct: 219 APE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 277
Query: 275 HNTDKL--QHLVDPMLCGNFSGNEAVRFL 301
K+ + + P + + EA+R +
Sbjct: 278 EEMRKVVCEQKLRPNIPNRWQSCEALRVM 306
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS---VESKQGEKEFMSE--VASMANI 105
N F +G GGFG VY + D G + A+K L ++ KQGE ++E + S+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 106 CHENLVKLHGGCIEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARG 164
+ P ++ + D M L L FS R A I G
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILG 304
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLA 224
L ++H +V+RD+KP+NILLD++ + +ISD GL+ F + H S GT GY+A
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 358
Query: 225 PDYAVSG-HLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHL 283
P+ G + +D +S G +L +++ G + + K + H D++
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP----------FRQHKTKDKHEIDRMTLT 408
Query: 284 VDPMLCGNFSGNEAVRFLKVGLL 306
+ L +FS +R L GLL
Sbjct: 409 MAVELPDSFSPE--LRSLLEGLL 429
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 39/269 (14%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLV------- 111
+G+G FG V++GK + G VAVK+ S S++ F +E+ + HEN++
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 73
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K +G + +V DY ++ SL L NR + ++AL A GLA++H E
Sbjct: 74 KDNGTWTQ---LWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 125
Query: 172 I-----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS---TRVAGTLGYL 223
I KP+I HRD+K NIL+ +N I+D GL+ I GT Y+
Sbjct: 126 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 185
Query: 224 APDYAVSGHLNPK-------SDIYSFGVLLLQIV--TGQAAVHFDKELGEYYLVEKAWEM 274
AP+ + +N K +DIY+ G++ +I +H D +L Y LV +
Sbjct: 186 APE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 244
Query: 275 HNTDKL--QHLVDPMLCGNFSGNEAVRFL 301
K+ + + P + + EA+R +
Sbjct: 245 EEMRKVVCEQKLRPNIPNRWQSCEALRVM 273
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 39/269 (14%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLV------- 111
+G+G FG V++GK + G VAVK+ S S++ F +E+ + HEN++
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 93
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K +G + +V DY ++ SL L NR + ++AL A GLA++H E
Sbjct: 94 KDNGTWTQ---LWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 145
Query: 172 I-----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF---PEDITHISTRVAGTLGYL 223
I KP+I HRD+K NIL+ +N I+D GL+ + I GT Y+
Sbjct: 146 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 205
Query: 224 APDYAVSGHLNPK-------SDIYSFGVLLLQIV--TGQAAVHFDKELGEYYLVEKAWEM 274
AP+ + +N K +DIY+ G++ +I +H D +L Y LV +
Sbjct: 206 APE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 264
Query: 275 HNTDKL--QHLVDPMLCGNFSGNEAVRFL 301
K+ + + P + + EA+R +
Sbjct: 265 EEMRKVVCEQKLRPNIPNRWQSCEALRVM 293
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 39/269 (14%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLV------- 111
+G+G FG V++GK + G VAVK+ S S++ F +E+ + HEN++
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 68
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K +G + +V DY ++ SL L NR + ++AL A GLA++H E
Sbjct: 69 KDNGTWTQ---LWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 120
Query: 172 I-----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF---PEDITHISTRVAGTLGYL 223
I KP+I HRD+K NIL+ +N I+D GL+ + I GT Y+
Sbjct: 121 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 180
Query: 224 APDYAVSGHLNPK-------SDIYSFGVLLLQIV--TGQAAVHFDKELGEYYLVEKAWEM 274
AP+ + +N K +DIY+ G++ +I +H D +L Y LV +
Sbjct: 181 APE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 239
Query: 275 HNTDKL--QHLVDPMLCGNFSGNEAVRFL 301
K+ + + P + + EA+R +
Sbjct: 240 EEMRKVVCEQKLRPNIPNRWQSCEALRVM 268
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS---VESKQGEKEFMSE--VASMANI 105
N F +G GGFG VY + D G + A+K L ++ KQGE ++E + S+ +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 106 CHENLVKLHGGCIEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARG 164
+ P ++ + D M L L FS R A I G
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILG 303
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLA 224
L ++H +V+RD+KP+NILLD++ + +ISD GL+ F + H S GT GY+A
Sbjct: 304 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 357
Query: 225 PDYAVSG-HLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHL 283
P+ G + +D +S G +L +++ G + + K + H D++
Sbjct: 358 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP----------FRQHKTKDKHEIDRMTLT 407
Query: 284 VDPMLCGNFSGNEAVRFLKVGLL 306
+ L +FS +R L GLL
Sbjct: 408 MAVELPDSFSPE--LRSLLEGLL 428
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 104/214 (48%), Gaps = 13/214 (6%)
Query: 42 FSYNELKSATNGFCSSNKVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQG-EKEFMSEV 99
+ ELK + F +++G G G V+K G V+A K++ +E K + + E+
Sbjct: 1 MALGELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIREL 58
Query: 100 ASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIAL 159
+ +V +G I ++M SL Q L K + ++++
Sbjct: 59 QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSI 114
Query: 160 GIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT 219
+ +GL Y+ E+ K I+HRD+KPSNIL++ K+ DFG+S I ++ GT
Sbjct: 115 AVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDEMANEFVGT 169
Query: 220 LGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
Y++P+ H + +SDI+S G+ L+++ G+
Sbjct: 170 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 125/269 (46%), Gaps = 39/269 (14%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLV------- 111
+G+G FG V++GK + G VAVK+ S S++ F +E+ + HEN++
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILGFIAADN 70
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K +G + +V DY ++ SL L NR + ++AL A GLA++H E
Sbjct: 71 KDNGTWTQ---LWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALSTASGLAHLHME 122
Query: 172 I-----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS---TRVAGTLGYL 223
I KP+I HRD+K NIL+ +N I+D GL+ I GT Y+
Sbjct: 123 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYM 182
Query: 224 APDYAVSGHLNPK-------SDIYSFGVLLLQIV--TGQAAVHFDKELGEYYLVEKAWEM 274
AP+ + +N K +DIY+ G++ +I +H D +L Y LV +
Sbjct: 183 APE-VLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 241
Query: 275 HNTDKL--QHLVDPMLCGNFSGNEAVRFL 301
K+ + + P + + EA+R +
Sbjct: 242 EEMRKVVCEQKLRPNIPNRWQSCEALRVM 270
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 60 VGEGGFGSVYKGKLQ-----DGTVVAVKVLSVESKQGE-KEFMSEVASMANICHENLVKL 113
+GEG FG V + G VAVK L ES + E+ + N+ HEN+VK
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 114 HGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
G C E G ++ +++ + SL + L KN+ K + + + A+ I +G+ Y+
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 133
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTR--VAGTLGYLAPDYAV 229
VHRD+ N+L++ KI DFGL+K D + + + + AP+ +
Sbjct: 134 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
SD++SFGV L +++T
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS---VESKQGEKEFMSE--VASMANI 105
N F +G GGFG VY + D G + A+K L ++ KQGE ++E + S+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 106 CHENLVKLHGGCIEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARG 164
+ P ++ + D M L L FS R A I G
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILG 304
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLA 224
L ++H +V+RD+KP+NILLD++ + +ISD GL+ F + H S GT GY+A
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 358
Query: 225 PDYAVSG-HLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHL 283
P+ G + +D +S G +L +++ G + + K + H D++
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP----------FRQHKTKDKHEIDRMTLT 408
Query: 284 VDPMLCGNFSGNEAVRFLKVGLL 306
+ L +FS +R L GLL
Sbjct: 409 MAVELPDSFSPE--LRSLLEGLL 429
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 118/263 (44%), Gaps = 30/263 (11%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS---VESKQGEKEFMSE--VASMANI 105
N F +G GGFG VY + D G + A+K L ++ KQGE ++E + S+ +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 106 CHENLVKLHGGCIEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARG 164
+ P ++ + D M L L FS R A I G
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL----SQHGVFSEADMRFYAAEIILG 304
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLA 224
L ++H +V+RD+KP+NILLD++ + +ISD GL+ F + H S GT GY+A
Sbjct: 305 LEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV---GTHGYMA 358
Query: 225 PDYAVSG-HLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHL 283
P+ G + +D +S G +L +++ G + + K + H D++
Sbjct: 359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSP----------FRQHKTKDKHEIDRMTLT 408
Query: 284 VDPMLCGNFSGNEAVRFLKVGLL 306
+ L +FS +R L GLL
Sbjct: 409 MAVELPDSFSPE--LRSLLEGLL 429
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 16/199 (8%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGEKE--FMSEVASMANICHENLVKLHGG 116
+G+G FG V K K + AVKV++ S + + + EV + + H N++KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
+ IV + L ++ R +FS I + G+ Y+H K +I
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMH---KHNI 142
Query: 177 VHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
VHRD+KP NILL +++ + KI DFGLS F ++ T + R+ GT Y+AP+ + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTY 199
Query: 234 NPKSDIYSFGVLLLQIVTG 252
+ K D++S GV+L +++G
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 96/197 (48%), Gaps = 8/197 (4%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVES-KQGEKEFM-SEVASMANICHENLVKLHGG 116
+G G +G K + + DG ++ K L S + EK+ + SEV + + H N+V+ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 117 CIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFS--WTARREIALGIARGLAYIHEEI 172
I+ IV +Y + L+ + K R + R L +A + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGH 232
+++HRD+KP+N+ LD N K+ DFGL+++ D T + GT Y++P+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAFVGTPYYMSPEQMNRMS 192
Query: 233 LNPKSDIYSFGVLLLQI 249
N KSDI+S G LL ++
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEK---EFMSEVASMANICHENLVKLH- 114
+G GG V+ + L+D VAVKVL + + F E + A + H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 115 ---GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
GP IV +Y+ +L + E K + E+ + L + H+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSHQN 135
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHI--STRVAGTLGYLAPDYAV 229
I+HRD+KP+NIL+ K+ DFG+++ + + + V GT YL+P+ A
Sbjct: 136 ---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQAR 192
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY 266
++ +SD+YS G +L +++TG+ D + Y
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 60 VGEGGFGSVYKGKLQ-----DGTVVAVKVLSVESKQGE-KEFMSEVASMANICHENLVKL 113
+GEG FG V + G VAVK L ES + E+ + N+ HEN+VK
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 114 HGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
G C E G ++ +++ + SL + L KN+ K + + + A+ I +G+ Y+
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSR 145
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTR--VAGTLGYLAPDYAV 229
VHRD+ N+L++ KI DFGL+K D + + + + AP+ +
Sbjct: 146 ---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
SD++SFGV L +++T
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 16/199 (8%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGE--KEFMSEVASMANICHENLVKLHGG 116
+G+G FG V K K + AVKV++ S + + + EV + + H N++KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
+ IV + L ++ R +FS I + G+ Y+H K +I
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMH---KHNI 142
Query: 177 VHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
VHRD+KP NILL +++ + KI DFGLS F ++ T + R+ GT Y+AP+ + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTY 199
Query: 234 NPKSDIYSFGVLLLQIVTG 252
+ K D++S GV+L +++G
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 17/217 (7%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEK---EFMSEVASMANICHENLVKLH- 114
+G GG V+ + L+D VAVKVL + + F E + A + H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 115 ---GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
GP IV +Y+ +L + E K + E+ + L + H+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSHQN 135
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAV 229
I+HRD+KP+NI++ K+ DFG+++ + ++ A GT YL+P+ A
Sbjct: 136 ---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY 266
++ +SD+YS G +L +++TG+ D + Y
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 16/199 (8%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGE--KEFMSEVASMANICHENLVKLHGG 116
+G+G FG V K K + AVKV++ S + + + EV + + H N++KL
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
+ IV + L ++ R +FS I + G+ Y+H K +I
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEII----KRKRFSEHDAARIIKQVFSGITYMH---KHNI 142
Query: 177 VHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
VHRD+KP NILL +++ + KI DFGLS F ++ T + R+ GT Y+AP+ + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTY 199
Query: 234 NPKSDIYSFGVLLLQIVTG 252
+ K D++S GV+L +++G
Sbjct: 200 DEKCDVWSAGVILYILLSG 218
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 114/243 (46%), Gaps = 28/243 (11%)
Query: 60 VGEGGFGSVYKGKLQDGTVV-AVKVL---SVESKQGEKEFMSEV-ASMANICHENLVKLH 114
+G+G FG V + + V AVKVL ++ K+ EK MSE + N+ H LV LH
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALGIARGLAYIHEE 171
V DY+ L L E + RA+F A IA L Y+H
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-------YAAEIASALGYLHSL 158
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST--RVAGTLGYLAPDYAV 229
+IV+RD+KP NILLD + ++DFGL K E+I H ST GT YLAP+
Sbjct: 159 ---NIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY--LVEKAWEMHN--TDKLQHLVD 285
+ D + G +L +++ G + + E Y ++ K ++ T+ +HL++
Sbjct: 213 KQPYDRTVDWWCLGAVLYEMLYGLPPF-YSRNTAEMYDNILNKPLQLKPNITNSARHLLE 271
Query: 286 PML 288
+L
Sbjct: 272 GLL 274
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 52 NGFCSSNKVGEGGFGSVYKG--KLQDGTV-VAVKVLSVESKQGE-KEFMSEVASMANICH 107
N + ++G G FGSV +G +++ + VA+KVL +++ + +E M E M + +
Sbjct: 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 69
Query: 108 ENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAY 167
+V+L G C + ++V + L + L+G+ R + + E+ ++ G+ Y
Sbjct: 70 PYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKY 125
Query: 168 IHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAP 225
+ E+ + VHRD+ N+LL KISDFGLSK D ++ + R AG L + AP
Sbjct: 126 LEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAP 182
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ + +SD++S+GV + + ++
Sbjct: 183 ECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEK---EFMSEVASMANICHENLVKLH- 114
+G GG V+ + L+D VAVKVL + + F E + A + H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 115 ---GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
GP IV +Y+ +L + E K + E+ + L + H+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSHQN 135
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAV 229
I+HRD+KP+NI++ K+ DFG+++ + ++ A GT YL+P+ A
Sbjct: 136 ---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQ 253
++ +SD+YS G +L +++TG+
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 14/225 (6%)
Query: 37 KNINAFSYNELKSAT---NGFCSSNKVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQG- 91
K + AF + K + F +++G G G V+K G V+A K++ +E K
Sbjct: 15 KRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAI 74
Query: 92 EKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW 151
+ + E+ + +V +G I ++M SL Q L K +
Sbjct: 75 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPE 130
Query: 152 TARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH 211
++++ + +GL Y+ E+ K I+HRD+KPSNIL++ K+ DFG+S I
Sbjct: 131 QILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDS 185
Query: 212 ISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAV 256
++ GT Y++P+ H + +SDI+S G+ L+++ G+ +
Sbjct: 186 MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
A F +G+G FG+VY + Q ++A+KVL +E E + EV +++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L+G + ++ +Y ++ + L + +KF +A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYREL----QKLSKFDEQRTATYITELANAL 147
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAP 225
+Y H + ++HRDIKP N+LL KI+DFG S P + + GTL YL P
Sbjct: 148 SYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDDLCGTLDYLPP 201
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + K D++S GVL + + G+
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGK 229
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQG-EKEFMSEVASMA 103
ELK + F +++G G G V+K G V+A K++ +E K + + E+ +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
+V +G I ++M SL Q L K + ++++ + +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIK 115
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
GL Y+ E+ K I+HRD+KPSNIL++ K+ DFG+S I ++ GT Y+
Sbjct: 116 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYM 170
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAV 256
+P+ H + +SDI+S G+ L+++ G+ +
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQG-EKEFMSEVASMA 103
ELK + F +++G G G V+K G V+A K++ +E K + + E+ +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
+V +G I ++M SL Q L K + ++++ + +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIK 115
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
GL Y+ E+ K I+HRD+KPSNIL++ K+ DFG+S I ++ GT Y+
Sbjct: 116 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYM 170
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAV 256
+P+ H + +SDI+S G+ L+++ G+ +
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQG-EKEFMSEVASMA 103
ELK + F +++G G G V+K G V+A K++ +E K + + E+ +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
+V +G I ++M SL Q L K + ++++ + +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIK 115
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
GL Y+ E+ K I+HRD+KPSNIL++ K+ DFG+S I ++ GT Y+
Sbjct: 116 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYM 170
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAV 256
+P+ H + +SDI+S G+ L+++ G+ +
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQG-EKEFMSEVASMA 103
ELK + F +++G G G V+K G V+A K++ +E K + + E+ +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
+V +G I ++M SL Q L K + ++++ + +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIK 115
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
GL Y+ E+ K I+HRD+KPSNIL++ K+ DFG+S I ++ GT Y+
Sbjct: 116 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYM 170
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAV 256
+P+ H + +SDI+S G+ L+++ G+ +
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQG-EKEFMSEVASMA 103
ELK + F +++G G G V+K G V+A K++ +E K + + E+ +
Sbjct: 2 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 59
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
+V +G I ++M SL Q L K + ++++ + +
Sbjct: 60 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIK 115
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
GL Y+ E+ K I+HRD+KPSNIL++ K+ DFG+S I ++ GT Y+
Sbjct: 116 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYM 170
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAV 256
+P+ H + +SDI+S G+ L+++ G+ +
Sbjct: 171 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 101/202 (50%), Gaps = 18/202 (8%)
Query: 58 NKVGEGGFGSVYKGKLQ-DGTVVAVKVLS---VESKQGEKEFMSEVASMANICHENLVKL 113
+ +G G FG V GK + G VAVK+L+ + S + E+ ++ H +++KL
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 114 HGGCIEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
+ I P I +V +Y+ L + KN + R + I G+ Y H +
Sbjct: 82 YQ-VISTPSDIFMVMEYVSGGELFDYIC---KN-GRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGH 232
+VHRD+KP N+LLD + N KI+DFGLS + + G+ Y AP+ +SG
Sbjct: 137 ---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRXSCGSPNYAAPE-VISGR 190
Query: 233 L--NPKSDIYSFGVLLLQIVTG 252
L P+ DI+S GV+L ++ G
Sbjct: 191 LYAGPEVDIWSSGVILYALLCG 212
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K T VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++ +
Sbjct: 81 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 139
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
A +ARG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ DI HI
Sbjct: 140 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 192
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVLL +I T
Sbjct: 193 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 104/220 (47%), Gaps = 36/220 (16%)
Query: 60 VGEGGFGSVY--------KGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANIC-HEN 109
+GEG FG V K K T VAVK+L ++ + + + +SE+ M I H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 110 LVKLHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------------E 156
++ L G C + GP +IV +Y +L + L ++ +
Sbjct: 96 IINLLGACTQDGPLYVIV-EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVS 154
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
A +ARG+ Y+ + +HRD+ N+L+ ++ KI+DFGL++ DI HI
Sbjct: 155 CAYQVARGMEYLASK---KCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYK 207
Query: 217 AGTLG-----YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
T G ++AP+ +SD++SFGVLL +I T
Sbjct: 208 KTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 19/201 (9%)
Query: 60 VGEGGFGSVY--KGKLQDGTVVAVKVLS---VESKQGEKEFMSEVASMANICHENLVKLH 114
+G+G FG V K K+ G AVKV+S V+ K ++ + EV + + H N++KL+
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V + L ++ +R +FS I + G+ Y+H K
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMH---KN 145
Query: 175 SIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
IVHRD+KP N+LL+ ++ N +I DFGLS F E + ++ GT Y+AP+ + G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHG 202
Query: 232 HLNPKSDIYSFGVLLLQIVTG 252
+ K D++S GV+L +++G
Sbjct: 203 TYDEKCDVWSTGVILYILLSG 223
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 109/221 (49%), Gaps = 33/221 (14%)
Query: 60 VGEGGFGSVYKG-----KLQDG-TVVAVKVLSVESKQGE-KEFMSEVASMANICHENLVK 112
+GEG FG V K K + G T VAVK+L + E ++ +SE + + H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 113 LHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEK------------NRAKFSWTARREIAL 159
L+G C + GP +IV +Y + SL L K N + R + +
Sbjct: 91 LYGACSQDGPLLLIV-EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 160 G--------IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDIT 210
G I++G+ Y+ E +VHRD+ NIL+ + KISDFGLS+ ++ ED
Sbjct: 150 GDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 211 HISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ + ++A + +SD++SFGVLL +IVT
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 35/222 (15%)
Query: 60 VGEGGFGSVYKG-----KLQDG-TVVAVKVLSVESKQGE-KEFMSEVASMANICHENLVK 112
+GEG FG V K K + G T VAVK+L + E ++ +SE + + H +++K
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 113 LHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEK------------NRAKFSWTARREIAL 159
L+G C + GP +IV +Y + SL L K N + R + +
Sbjct: 91 LYGACSQDGPLLLIV-EYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 160 G--------IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH 211
G I++G+ Y+ E +VHRD+ NIL+ + KISDFGLS+ E+ ++
Sbjct: 150 GDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 212 ISTRVAGTL--GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ R G + ++A + +SD++SFGVLL +IVT
Sbjct: 207 VK-RSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 29/219 (13%)
Query: 54 FCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
F N +G+G F VY+ + + G VA+K++ +K+ M + + + +N VK
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMI-------DKKAMYKAGMVQRV--QNEVK 63
Query: 113 LHGGC-IEGPCRIIVYDYMQNNSLSQTLL-----GEE----KNRAK-FSWTARREIALGI 161
+H C ++ P + +Y+Y ++++ +L GE KNR K FS R I
Sbjct: 64 IH--CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQI 121
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL-SKLFPEDITHISTRVAGTL 220
G+ Y+H I+HRD+ SN+LL +N N KI+DFGL ++L H + + GT
Sbjct: 122 ITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTP 176
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFD 259
Y++P+ A +SD++S G + ++ G+ D
Sbjct: 177 NYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 104/213 (48%), Gaps = 13/213 (6%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQG-EKEFMSEVASMA 103
ELK + F +++G G G V+K G V+A K++ +E K + + E+ +
Sbjct: 64 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 121
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
+V +G I ++M SL Q L K + ++++ + +
Sbjct: 122 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIK 177
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
GL Y+ E+ K I+HRD+KPSNIL++ K+ DFG+S I ++ GT Y+
Sbjct: 178 GLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYM 232
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAV 256
+P+ H + +SDI+S G+ L+++ G+ +
Sbjct: 233 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 19/201 (9%)
Query: 60 VGEGGFGSVY--KGKLQDGTVVAVKVLS---VESKQGEKEFMSEVASMANICHENLVKLH 114
+G+G FG V K K+ G AVKV+S V+ K ++ + EV + + H N++KL+
Sbjct: 40 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V + L ++ +R +FS I + G+ Y+H K
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMH---KN 151
Query: 175 SIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
IVHRD+KP N+LL+ ++ N +I DFGLS F E + ++ GT Y+AP+ + G
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHG 208
Query: 232 HLNPKSDIYSFGVLLLQIVTG 252
+ K D++S GV+L +++G
Sbjct: 209 TYDEKCDVWSTGVILYILLSG 229
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 41/236 (17%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
+G+G FG V K + D A+K + +++ +SEV +A++ H+ +V+ + +
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 119 E-------------GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFS-WTARREIALGIARG 164
E I +Y +N +L + E N+ + W R+I
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL----EA 128
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE--DITHIS--------- 213
L+YIH + I+HR++KP NI +D++ N KI DFGL+K DI +
Sbjct: 129 LSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 214 --TRVAGTLGYLAPDYAV-SGHLNPKSDIYSFGVLLLQIV----TGQAAVHFDKEL 262
T GT Y+A + +GH N K D YS G++ + + TG V+ K+L
Sbjct: 186 NLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYPFSTGXERVNILKKL 241
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 19/201 (9%)
Query: 60 VGEGGFGSVY--KGKLQDGTVVAVKVLS---VESKQGEKEFMSEVASMANICHENLVKLH 114
+G+G FG V K K+ G AVKV+S V+ K ++ + EV + + H N++KL+
Sbjct: 57 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V + L ++ +R +FS I + G+ Y+H K
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMH---KN 168
Query: 175 SIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
IVHRD+KP N+LL+ ++ N +I DFGLS F E + ++ GT Y+AP+ + G
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHG 225
Query: 232 HLNPKSDIYSFGVLLLQIVTG 252
+ K D++S GV+L +++G
Sbjct: 226 TYDEKCDVWSTGVILYILLSG 246
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 103/213 (48%), Gaps = 13/213 (6%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQG-EKEFMSEVASMA 103
ELK + F +++G G G V+K G V+A K++ +E K + + E+ +
Sbjct: 21 ELKD--DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 78
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
+V +G I ++M SL Q L K + ++++ + +
Sbjct: 79 ECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL----KKAGRIPEQILGKVSIAVIK 134
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
GL Y+ E K I+HRD+KPSNIL++ K+ DFG+S I ++ GT Y+
Sbjct: 135 GLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYM 189
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAV 256
+P+ H + +SDI+S G+ L+++ G+ +
Sbjct: 190 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 54 FCSSNKVGEGGFGSVYKGK--LQDGTVVAVKVLSVESKQGEK-EFMSEVASMANICHENL 110
+ +K+GEG + +VYKGK L D +VA+K + +E ++G + EV+ + ++ H N+
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAPCTAIREVSLLKDLKHANI 62
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKNRAKFSWTARREIALGIARGLAYI 168
V LH +V++Y+ + L Q L G N + + RGLAY
Sbjct: 63 VTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNV-----KLFLFQLLRGLAYC 116
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H + ++HRD+KP N+L+++ K++DFGL++ V TL Y PD
Sbjct: 117 HRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDIL 172
Query: 229 V-SGHLNPKSDIYSFGVLLLQIVTGQ 253
+ S + + D++ G + ++ TG+
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 105/201 (52%), Gaps = 19/201 (9%)
Query: 60 VGEGGFGSVY--KGKLQDGTVVAVKVLS---VESKQGEKEFMSEVASMANICHENLVKLH 114
+G+G FG V K K+ G AVKV+S V+ K ++ + EV + + H N++KL+
Sbjct: 58 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V + L ++ +R +FS I + G+ Y+H K
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYMH---KN 169
Query: 175 SIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
IVHRD+KP N+LL+ ++ N +I DFGLS F E + ++ GT Y+AP+ + G
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-GTAYYIAPE-VLHG 226
Query: 232 HLNPKSDIYSFGVLLLQIVTG 252
+ K D++S GV+L +++G
Sbjct: 227 TYDEKCDVWSTGVILYILLSG 247
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
+G+G +G VY G+ L + +A+K + + + E+A ++ H+N+V+ G
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG-----IARGLAYIHEEIK 173
E I + + SLS L R+K+ E +G I GL Y+H+
Sbjct: 76 ENGFIKIFMEQVPGGSLSALL------RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-- 127
Query: 174 PSIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGH 232
IVHRDIK N+L++ KISDFG SK I + GTL Y+AP+ G
Sbjct: 128 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGP 185
Query: 233 --LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE 264
+DI+S G ++++ TG+ + ELGE
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFY---ELGE 216
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 22/214 (10%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
+G+G +G VY G+ L + +A+K + + + E+A ++ H+N+V+ G
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG-----IARGLAYIHEEIK 173
E I + + SLS L R+K+ E +G I GL Y+H+
Sbjct: 90 ENGFIKIFMEQVPGGSLSALL------RSKWGPLKDNEQTIGFYTKQILEGLKYLHDN-- 141
Query: 174 PSIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGH 232
IVHRDIK N+L++ KISDFG SK I + GTL Y+AP+ G
Sbjct: 142 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGP 199
Query: 233 --LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGE 264
+DI+S G ++++ TG+ + ELGE
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFY---ELGE 230
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 21/208 (10%)
Query: 56 SSNKVGEGGFGSVYKG----KLQDGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENL 110
S +G+G FG VY G + Q+ A+K LS + Q + F+ E M + H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 111 VKLHGGCI--EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG--IARGLA 166
+ L G + EG +++ YM + L Q + ++N T + I+ G +ARG+
Sbjct: 85 LALIGIMLPPEGLPHVLL-PYMCHGDLLQFIRSPQRNP-----TVKDLISFGLQVARGME 138
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTL--GYL 223
Y+ E+ VHRD+ N +LD++F K++DFGL++ + + + L +
Sbjct: 139 YLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT 195
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A + + KSD++SFGVLL +++T
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLT 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 8/197 (4%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVES-KQGEKEFM-SEVASMANICHENLVKLHGG 116
+G G +G K + + DG ++ K L S + EK+ + SEV + + H N+V+ +
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 117 CIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFS--WTARREIALGIARGLAYIHEEI 172
I+ IV +Y + L+ + K R + R L +A + +
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGH 232
+++HRD+KP+N+ LD N K+ DFGL+++ D + GT Y++P+
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-EDFAKEFVGTPYYMSPEQMNRMS 192
Query: 233 LNPKSDIYSFGVLLLQI 249
N KSDI+S G LL ++
Sbjct: 193 YNEKSDIWSLGCLLYEL 209
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 100/199 (50%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ A + HEN+VK +G
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 126
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGT----VVAVKVLS---VESKQGEKEFMSEVASMANICHENL 110
K+G+G FG V +G+ + VAVK L + + +F+ EV +M ++ H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
++L+G + P +++ + L L K++ F A+ +A G+ Y+
Sbjct: 74 IRLYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH--ISTRVAGTLGYLAPDYA 228
+ +HRD+ N+LL KI DFGL + P++ H + + AP+
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ + SD + FGV L ++ T
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 129/272 (47%), Gaps = 27/272 (9%)
Query: 54 FCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV- 111
F K+G+G FG V+KG + VVA+K++ +E + E E + + ++ + C V
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K +G ++ I+ +Y+ S L + + + R I +GL Y+H E
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILRE-----ILKGLDYLHSE 143
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
K +HRDIK +N+LL ++ K++DFG++ + +T V GT ++AP+
Sbjct: 144 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQS 199
Query: 232 HLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVDPMLCGN 291
+ K+DI+S G+ +++ G+ + +L+ K +N P L GN
Sbjct: 200 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNP--------PTLEGN 247
Query: 292 FSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIE 323
+S F++ C+ ++ S RP +++
Sbjct: 248 YS-KPLKEFVEA---CLNKEPSFRPTAKELLK 275
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGT----VVAVKVLS---VESKQGEKEFMSEVASMANICHENL 110
K+G+G FG V +G+ + VAVK L + + +F+ EV +M ++ H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
++L+G + P +++ + L L K++ F A+ +A G+ Y+
Sbjct: 74 IRLYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH--ISTRVAGTLGYLAPDYA 228
+ +HRD+ N+LL KI DFGL + P++ H + + AP+
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ + SD + FGV L ++ T
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGT----VVAVKVLS---VESKQGEKEFMSEVASMANICHENL 110
K+G+G FG V +G+ + VAVK L + + +F+ EV +M ++ H NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
++L+G + P +++ + L L K++ F A+ +A G+ Y+
Sbjct: 74 IRLYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH--ISTRVAGTLGYLAPDYA 228
+ +HRD+ N+LL KI DFGL + P++ H + + AP+
Sbjct: 130 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ + SD + FGV L ++ T
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFT 209
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 131/272 (48%), Gaps = 27/272 (9%)
Query: 54 FCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV- 111
F K+G+G FG V+KG + VVA+K++ +E + E E + + ++ + C V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K +G ++ I+ +Y+ S L + + + T REI +GL Y+H E
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-TILREIL----KGLDYLHSE 123
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
K +HRDIK +N+LL ++ K++DFG++ + +T V GT ++AP+
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQS 179
Query: 232 HLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVDPMLCGN 291
+ K+DI+S G+ +++ G+ + +L+ K +N P L GN
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNP--------PTLEGN 227
Query: 292 FSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIE 323
+S F++ C+ ++ S RP +++
Sbjct: 228 YS-KPLKEFVEA---CLNKEPSFRPTAKELLK 255
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 60 VGEGGFGSV------YKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKL 113
+GEG FG V G+ ++ KVL+ QG E E++ + + H +++KL
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 69
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
+ I+V +Y N + R K S R I + Y H
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH-- 122
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
IVHRD+KP N+LLD++ N KI+DFGLS + D + T G+ Y AP+ +SG L
Sbjct: 123 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYAAPE-VISGKL 178
Query: 234 --NPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
P+ D++S GV+L ++ + FD E
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLP--FDDE 206
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGT----VVAVKVLS---VESKQGEKEFMSEVASMANICHENL 110
K+G+G FG V +G+ + VAVK L + + +F+ EV +M ++ H NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
++L+G + P +++ + L L K++ F A+ +A G+ Y+
Sbjct: 78 IRLYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH--ISTRVAGTLGYLAPDYA 228
+ +HRD+ N+LL KI DFGL + P++ H + + AP+
Sbjct: 134 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ + SD + FGV L ++ T
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFT 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGT----VVAVKVLS---VESKQGEKEFMSEVASMANICHENL 110
K+G+G FG V +G+ + VAVK L + + +F+ EV +M ++ H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
++L+G + P +++ + L L K++ F A+ +A G+ Y+
Sbjct: 84 IRLYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH--ISTRVAGTLGYLAPDYA 228
+ +HRD+ N+LL KI DFGL + P++ H + + AP+
Sbjct: 140 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ + SD + FGV L ++ T
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 58 NKVGEGGFGSVYKGKLQDGT----VVAVKVLS---VESKQGEKEFMSEVASMANICHENL 110
K+G+G FG V +G+ + VAVK L + + +F+ EV +M ++ H NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
++L+G + P +++ + L L K++ F A+ +A G+ Y+
Sbjct: 84 IRLYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH--ISTRVAGTLGYLAPDYA 228
+ +HRD+ N+LL KI DFGL + P++ H + + AP+
Sbjct: 140 K---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 229 VSGHLNPKSDIYSFGVLLLQIVT 251
+ + SD + FGV L ++ T
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFT 219
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 59 KVGEGGFGSVYKGKLQDGT----VVAVKVLS---VESKQGEKEFMSEVASMANICHENLV 111
K+G+G FG V +G+ + VAVK L + + +F+ EV +M ++ H NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
+L+G + P +++ + L L K++ F A+ +A G+ Y+ +
Sbjct: 79 RLYGVVLTPPMKMVT----ELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK 134
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH--ISTRVAGTLGYLAPDYAV 229
+HRD+ N+LL KI DFGL + P++ H + + AP+
Sbjct: 135 ---RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
+ + SD + FGV L ++ T
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 60 VGEGGFGSV------YKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKL 113
+GEG FG V G+ ++ KVL+ QG E E++ + + H +++KL
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 73
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
+ I+V +Y N + R K S R I + Y H
Sbjct: 74 YDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH-- 126
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
IVHRD+KP N+LLD++ N KI+DFGLS + D + T G+ Y AP+ +SG L
Sbjct: 127 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYAAPE-VISGKL 182
Query: 234 --NPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
P+ D++S GV+L ++ + + FD E
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRR--LPFDDE 210
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 93/195 (47%), Gaps = 21/195 (10%)
Query: 60 VGEGGFGSV------YKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKL 113
+GEG FG V G+ ++ KVL+ QG E E++ + + H +++KL
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 79
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
+ I+V +Y N + R K S R I + Y H
Sbjct: 80 YDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH-- 132
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
IVHRD+KP N+LLD++ N KI+DFGLS + D + T G+ Y AP+ +SG L
Sbjct: 133 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYAAPE-VISGKL 188
Query: 234 --NPKSDIYSFGVLL 246
P+ D++S GV+L
Sbjct: 189 YAGPEVDVWSCGVIL 203
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 100/210 (47%), Gaps = 23/210 (10%)
Query: 60 VGEGGFGSV------YKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKL 113
+GEG FG V G+ ++ KVL+ QG E E++ + + H +++KL
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIE--REISYLRLLRHPHIIKL 78
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
+ I+V +Y N + R K S R I + Y H
Sbjct: 79 YDVIKSKDEIIMVIEYAGNELFDYIV-----QRDKMSEQEARRFFQQIISAVEYCHRH-- 131
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
IVHRD+KP N+LLD++ N KI+DFGLS + D + T G+ Y AP+ +SG L
Sbjct: 132 -KIVHRDLKPENLLLDEHLNVKIADFGLSNIM-TDGNFLKTS-CGSPNYAAPE-VISGKL 187
Query: 234 --NPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
P+ D++S GV+L ++ + + FD E
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRR--LPFDDE 215
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 106/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N AK + + + I RGL YIH
Sbjct: 85 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 193
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 60 VGEGGFGSVY---KGKLQDGT--VVAVKVLSVES-KQGEKEFMSEVASMANICHENLVKL 113
+GEG FG V DGT +VAVK L ++ Q + E+ + + HE+++K
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 114 HGGCIE-GPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
G C + G + +V +Y+ SL L A+ A++ I G+AY+H +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQ 153
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDYAV 229
+HRD+ N+LLD + KI DFGL+K PE R G + + AP+
Sbjct: 154 ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
SD++SFGV L +++T
Sbjct: 211 EYKFYYASDVWSFGVTLYELLT 232
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 31/213 (14%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLHGG 116
++G+G +G V+ GK + G VAVKV + E +E +E+ + HEN++
Sbjct: 43 KQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRE--TEIYQTVLMRHENILGFIAA 99
Query: 117 CIEGPCR----IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
I+G ++ DY +N SL L + ++A GL ++H EI
Sbjct: 100 DIKGTGSWTQLYLITDYHENGSLYDYL-----KSTTLDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 173 -----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHI----STRVAGTLGYL 223
KP+I HRD+K NIL+ +N I+D GL+ F D + +TRV GT Y+
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYM 213
Query: 224 APDYAVSGHLNPK-------SDIYSFGVLLLQI 249
P+ + LN +D+YSFG++L ++
Sbjct: 214 PPE-VLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 20/202 (9%)
Query: 60 VGEGGFGSVYKG-KLQDGTVV----AVKVLS-VESKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V A+K+L+ + EFM E MA++ H +LV+L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKN---RAKFSWTARREIALGIARGLAYIHE 170
G C+ P +V M + L + + + N + +W + IA+G+ Y+ E
Sbjct: 83 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 135
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAV 229
+VHRD+ N+L+ + KI+DFGL++L D + + ++A +
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
+SD++S+GV + +++T
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMT 214
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 27/272 (9%)
Query: 54 FCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV- 111
F K+G+G FG V+KG + VVA+K++ +E + E E + + ++ + C V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K +G ++ I+ +Y+ S L + + + T REI +GL Y+H E
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-TILREIL----KGLDYLHSE 138
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
K +HRDIK +N+LL ++ K++DFG++ D GT ++AP+
Sbjct: 139 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 232 HLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVDPMLCGN 291
+ K+DI+S G+ +++ G+ + +L+ K +N P L GN
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNP--------PTLEGN 242
Query: 292 FSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIE 323
+S F++ C+ ++ S RP +++
Sbjct: 243 YS-KPLKEFVEA---CLNKEPSFRPTAKELLK 270
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 101/201 (50%), Gaps = 19/201 (9%)
Query: 60 VGEGGFGSVY--KGKLQDGTVVAVKVLS---VESKQGEKEFMSEVASMANICHENLVKLH 114
+G+G FG V K K+ G AVKV+S V+ K ++ + EV + + H N+ KL+
Sbjct: 34 LGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V + L ++ +R +FS I + G+ Y H K
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEII----SRKRFSEVDAARIIRQVLSGITYXH---KN 145
Query: 175 SIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
IVHRD+KP N+LL+ ++ N +I DFGLS F + + GT Y+AP+ + G
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAYYIAPE-VLHG 202
Query: 232 HLNPKSDIYSFGVLLLQIVTG 252
+ K D++S GV+L +++G
Sbjct: 203 TYDEKCDVWSTGVILYILLSG 223
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 27/272 (9%)
Query: 54 FCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV- 111
F K+G+G FG V+KG + VVA+K++ +E + E E + + ++ + C V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K +G ++ I+ +Y+ S L + + + T REI +GL Y+H E
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIA-TILREIL----KGLDYLHSE 123
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
K +HRDIK +N+LL ++ K++DFG++ D GT ++AP+
Sbjct: 124 KK---IHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 232 HLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVDPMLCGN 291
+ K+DI+S G+ +++ G+ + +L+ K +N P L GN
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK----NNP--------PTLEGN 227
Query: 292 FSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIE 323
+S F++ C+ ++ S RP +++
Sbjct: 228 YS-KPLKEFVEA---CLNKEPSFRPTAKELLK 255
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 20/202 (9%)
Query: 60 VGEGGFGSVYKG-KLQDGTVV----AVKVLS-VESKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V A+K+L+ + EFM E MA++ H +LV+L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKN---RAKFSWTARREIALGIARGLAYIHE 170
G C+ P +V M + L + + + N + +W + IA+G+ Y+ E
Sbjct: 106 LGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQ------IAKGMMYLEE 158
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAV 229
+VHRD+ N+L+ + KI+DFGL++L D + + ++A +
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
+SD++S+GV + +++T
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMT 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 54 FCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENL 110
+ S VG G +GSV + G VA+K LS +S+ K E+ + ++ HEN+
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
+ L YD+ QT L ++ KFS + + + +GL YIH
Sbjct: 86 IGLLDVFTPASSLRNFYDFYLVMPFMQTDL-QKIMGLKFSEEKIQYLVYQMLKGLKYIHS 144
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAV 229
+VHRD+KP N+ ++++ KI DFGL++ ++T ++ TR Y AP+ +
Sbjct: 145 A---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYRAPEVIL 196
Query: 230 SG-HLNPKSDIYSFGVLLLQIVTGQA 254
S H N DI+S G ++ +++TG+
Sbjct: 197 SWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 12/211 (5%)
Query: 60 VGEGGFGSVYKGKLQD-GTVVAVK--VLSVESKQGEKEFMSEVASMANICHENLVKLHGG 116
VGEG +G V K + +D G +VA+K + S + K +K M E+ + + HENLV L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
C + +V++++ + L L + ++ I G+ + H +I
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQKYLFQIINGIGFCHSH---NI 145
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPK 236
+HRDIKP NIL+ Q+ K+ DFG ++ VA T Y AP+ V K
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA-TRWYRAPELLVGDVKYGK 204
Query: 237 S-DIYSFGVLLLQIVTGQAAVHFDKELGEYY 266
+ D+++ G L+ ++ G+ D ++ + Y
Sbjct: 205 AVDVWAIGCLVTEMFMGEPLFPGDSDIDQLY 235
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 60 VGEGGFGSVY----KGKLQDGTVVAVKVLSVESKQGEKEFMSEVAS--MANICHENLVKL 113
+G+G FG V+ + G + A+KVL + + +++ +A++ H +VKL
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 114 HGGC-IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
H EG +I+ D+++ L L E F+ + +A GL ++H
Sbjct: 96 HYAFQTEGKLYLIL-DFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALGLDHLHS-- 148
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAVS 230
I++RD+KP NILLD+ + K++DFGLSK E I H + GT+ Y+AP+
Sbjct: 149 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 231 GHLNPKSDIYSFGVLLLQIVTG 252
+ +D +S+GVL+ +++TG
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTG 226
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 44 YNE-LKSATNGFCSSNKVGEGGFGSVYK------GKLQDGTVVAVKVLSVESKQGEKE-F 95
YNE + N +G G FG V + GK VAVK+L + EKE
Sbjct: 29 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 88
Query: 96 MSEVASMANIC-HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTAR 154
MSE+ M+++ HEN+V L G C G +++ +Y L L K A
Sbjct: 89 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKAEADLDKEDG 146
Query: 155 REIAL--------GIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFP 206
R + L +A+G+A++ + + +HRD+ N+LL KI DFGL++
Sbjct: 147 RPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 203
Query: 207 EDITHISTRVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
D +I A + ++AP+ +SD++S+G+LL +I +
Sbjct: 204 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 17/217 (7%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEK---EFMSEVASMANICHENLVKLHG 115
+G GG V+ + L+ VAVKVL + + F E + A + H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYA 79
Query: 116 -GCIE---GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
G E GP IV +Y+ +L + E K + E+ + L + H+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSHQN 135
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAV 229
I+HRD+KP+NI++ K+ DFG+++ + ++ A GT YL+P+ A
Sbjct: 136 ---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY 266
++ +SD+YS G +L +++TG+ D + Y
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 20/215 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLS---VESKQGEKEFMSEVASMANICHEN 109
+ + +G G FG V G+ Q G VAVK+L+ + S + E+ ++ H +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 110 LVKLHGGCIEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
++KL+ I P +V +Y+ L + + R + I + Y
Sbjct: 73 IIKLYQ-VISTPTDFFMVMEYVSGGELFDYIC----KHGRVEEMEARRLFQQILSAVDYC 127
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H + +VHRD+KP N+LLD + N KI+DFGLS + D + T G+ Y AP+
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFLRTS-CGSPNYAAPE-V 181
Query: 229 VSGHL--NPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+SG L P+ DI+S GV+L ++ G + FD E
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCG--TLPFDDE 214
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 104/226 (46%), Gaps = 23/226 (10%)
Query: 44 YNE-LKSATNGFCSSNKVGEGGFGSVYK------GKLQDGTVVAVKVLSVESKQGEKE-F 95
YNE + N +G G FG V + GK VAVK+L + EKE
Sbjct: 37 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 96
Query: 96 MSEVASMANIC-HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTAR 154
MSE+ M+++ HEN+V L G C G +++ +Y L L K A
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKAEADLDKEDG 154
Query: 155 REIAL--------GIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFP 206
R + L +A+G+A++ + + +HRD+ N+LL KI DFGL++
Sbjct: 155 RPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 211
Query: 207 EDITHISTRVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
D +I A + ++AP+ +SD++S+G+LL +I +
Sbjct: 212 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 106/199 (53%), Gaps = 13/199 (6%)
Query: 59 KVGEGGFGSVYKG--KLQDGTV-VAVKVLSVESKQGE-KEFMSEVASMANICHENLVKLH 114
++G G FGSV +G +++ + VA+KVL +++ + +E M E M + + +V+L
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI 402
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G C + ++V + L + L+G+ R + + E+ ++ G+ Y+ E+
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEK--- 455
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDYAVSGH 232
+ VHR++ N+LL KISDFGLSK D ++ + R AG L + AP+
Sbjct: 456 NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK 515
Query: 233 LNPKSDIYSFGVLLLQIVT 251
+ +SD++S+GV + + ++
Sbjct: 516 FSSRSDVWSYGVTMWEALS 534
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNA 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 126
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 126
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 13 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 124
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 185 EPVDVWSCGIVLTAMLAGE 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 26/212 (12%)
Query: 54 FCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENL 110
+ S VG G +GSV + G VA+K LS +S+ K E+ + ++ HEN+
Sbjct: 44 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 103
Query: 111 VKLHGGCIEGPCRIIVYDY------MQNNSLSQTLLGEEKNRAKFSWTARREIALGIARG 164
+ L YD+ MQ + Q ++G E + K + + + +G
Sbjct: 104 IGLLDVFTPASSLRNFYDFYLVMPFMQTDL--QKIMGMEFSEEKIQY-----LVYQMLKG 156
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYL 223
L YIH +VHRD+KP N+ ++++ KI DFGL++ ++T ++ TR Y
Sbjct: 157 LKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----WYR 208
Query: 224 APDYAVSG-HLNPKSDIYSFGVLLLQIVTGQA 254
AP+ +S H N DI+S G ++ +++TG+
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 94 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 126
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 126
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 126
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 99
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 100 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 155
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 156 --DIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 208
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 17/217 (7%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEK---EFMSEVASMANICHENLVKLH- 114
+G GG V+ + L+ VAVKVL + + F E + A + H +V ++
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 79
Query: 115 ---GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
GP IV +Y+ +L + E K + E+ + L + H+
Sbjct: 80 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSHQN 135
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAV 229
I+HRD+KP+NI++ K+ DFG+++ + ++ A GT YL+P+ A
Sbjct: 136 ---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY 266
++ +SD+YS G +L +++TG+ D + Y
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 229
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 126
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 105/220 (47%), Gaps = 31/220 (14%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEKE-FMSEVASMANI-CHENLV 111
+G G FG V K VAVK+L ++ E+E MSE+ M + HEN+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 112 KLHGGC-IEGPCRII--------VYDYMQNNSL----------SQTLLGEEKNRAKFSWT 152
L G C + GP +I + +Y+++ +Q L EE++ ++
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 153 ARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHI 212
A +A+G+ ++ E K S VHRD+ N+L+ KI DFGL++ D ++
Sbjct: 173 DLLCFAYQVAKGMEFL--EFK-SCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYV 229
Query: 213 STRVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A + ++AP+ G KSD++S+G+LL +I +
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 85 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 193
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 17/217 (7%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEK---EFMSEVASMANICHENLVKLH- 114
+G GG V+ + L+ VAVKVL + + F E + A + H +V ++
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYD 96
Query: 115 ---GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
GP IV +Y+ +L + E K + E+ + L + H+
Sbjct: 97 TGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI----EVIADACQALNFSHQN 152
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAV 229
I+HRD+KP+NI++ K+ DFG+++ + ++ A GT YL+P+ A
Sbjct: 153 ---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 209
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY 266
++ +SD+YS G +L +++TG+ D + Y
Sbjct: 210 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAY 246
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 94 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 149
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 150 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 85
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 86 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 141
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 142 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 194
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 86
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 87 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 195
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG +G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 126
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 187 EPVDVWSCGIVLTAMLAGE 205
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 85
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 86 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 141
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 142 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 194
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 96 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 96 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 204
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 95 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 96 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 96 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----WYRAPEIMLNW 204
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLS---VESKQGEKEFMSEVASMANICHEN 109
+ + +G G FG V G+ Q G VAVK+L+ + S + E+ ++ H +
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPH 72
Query: 110 LVKLHGGCIEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
++KL+ I P +V +Y+ L + + R + I + Y
Sbjct: 73 IIKLYQ-VISTPTDFFMVMEYVSGGELFDYIC----KHGRVEEMEARRLFQQILSAVDYC 127
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H + +VHRD+KP N+LLD + N KI+DFGLS + + G+ Y AP+
Sbjct: 128 HRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSD--GEFLRDSCGSPNYAAPE-V 181
Query: 229 VSGHL--NPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+SG L P+ DI+S GV+L ++ G + FD E
Sbjct: 182 ISGRLYAGPEVDIWSCGVILYALLCG--TLPFDDE 214
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 85 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 193
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ + H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 210
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 111
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 112 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 165
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 220
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 94 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 101 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 87
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 88 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 141
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 196
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 101 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 109 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 217
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 101 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 209
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 95 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 91 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 99
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 100 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 153
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 208
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
+G G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 94 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 202
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 91 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ + H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 224
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 95 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 91 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 95 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 203
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 107
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 108 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 163
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 164 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 216
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 98
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 99 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 152
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 207
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 91 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 146
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 147 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 199
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPE 174
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 224
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV- 229
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 178 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 23/228 (10%)
Query: 44 YNE-LKSATNGFCSSNKVGEGGFGSVYK------GKLQDGTVVAVKVLSVESKQGEKE-F 95
YNE + N +G G FG V + GK VAVK+L + EKE
Sbjct: 37 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 96
Query: 96 MSEVASMANIC-HENLVKLHGGCIEGPCRIIVYDYMQNNSL-------SQTLLGEEKNRA 147
MSE+ M+++ HEN+V L G C G +++ +Y L S+ L +
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 148 KFSWTARREI---ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKL 204
S + R++ + +A+G+A++ + + +HRD+ N+LL KI DFGL++
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 205 FPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
D +I A + ++AP+ +SD++S+G+LL +I +
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 104/203 (51%), Gaps = 13/203 (6%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQDGT--VVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
F +++G+G FG VYKG + + T VVA+K++ +E + E E + + ++ + C +
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 112 KLHGGCIEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
+ G ++ I+ +Y+ S + LL + T REI +GL Y+H
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGS-ALDLLKPGPLEETYIATILREIL----KGLDYLHS 134
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
E K +HRDIK +N+LL + + K++DFG++ D GT ++AP+
Sbjct: 135 ERK---IHRDIKAANVLLSEQGDVKLADFGVAGQL-TDTQIKRNXFVGTPFWMAPEVIKQ 190
Query: 231 GHLNPKSDIYSFGVLLLQIVTGQ 253
+ K+DI+S G+ +++ G+
Sbjct: 191 SAYDFKADIWSLGITAIELAKGE 213
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 109 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 217
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 184
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 185 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 13/205 (6%)
Query: 54 FCSSNKVGEGGFGSVY-KGKLQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLV 111
F K+G G FG V+ + G +K ++ + Q E + +E+ + ++ H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
K+ + IV + + L + ++ + S E+ + LAY H +
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 172 IKPSIVHRDIKPSNILLDQNFNP----KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+VH+D+KP NIL Q+ +P KI DFGL++LF D ST AGT Y+AP+
Sbjct: 144 ---HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSD--EHSTNAAGTALYMAPE- 196
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTG 252
+ K DI+S GV++ ++TG
Sbjct: 197 VFKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 72 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 128
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV- 229
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 129 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 184
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 185 XKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 223
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 107
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 108 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 163
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP+ ++
Sbjct: 164 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 216
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 25/230 (10%)
Query: 44 YNE-LKSATNGFCSSNKVGEGGFGSVYK------GKLQDGTVVAVKVLSVESKQGEKE-F 95
YNE + N +G G FG V + GK VAVK+L + EKE
Sbjct: 37 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 96
Query: 96 MSEVASMANIC-HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWT-- 152
MSE+ M+++ HEN+V L G C G +++ +Y L L + ++S+
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPS 156
Query: 153 -------ARREI---ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLS 202
+ R++ + +A+G+A++ + + +HRD+ N+LL KI DFGL+
Sbjct: 157 HNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLA 213
Query: 203 KLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ D +I A + ++AP+ +SD++S+G+LL +I +
Sbjct: 214 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 125
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 126 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 181
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 220
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 209
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 60 VGEGGFGSVY---KGKLQDGT--VVAVKVLSVES-KQGEKEFMSEVASMANICHENLVKL 113
+GEG FG V DGT +VAVK L + Q + E+ + + HE+++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 114 HGGCIEGPCRII--VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
G C + + + V +Y+ SL L A+ A++ I G+AY+H +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHSQ 136
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDYAV 229
+HR++ N+LLD + KI DFGL+K PE + R G + + AP+
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
SD++SFGV L +++T
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 171
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 172 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 224
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 225 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 163
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 164 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 216
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 217 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 173
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 174 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 226
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 227 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 20/202 (9%)
Query: 60 VGEGGFGSVYKGKLQDGT----VVAVKVLSVESKQGEKEFMSEVAS--MANICHENLVKL 113
+G+G FG V+ K G+ + A+KVL + + +++ + + H +VKL
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 114 HGGC-IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
H EG +I+ D+++ L L E F+ + +A L ++H
Sbjct: 92 HYAFQTEGKLYLIL-DFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHS-- 144
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAVS 230
I++RD+KP NILLD+ + K++DFGLSK E I H + GT+ Y+AP+
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 231 GHLNPKSDIYSFGVLLLQIVTG 252
+D +SFGVL+ +++TG
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTG 222
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ S+ + + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 121 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 20/202 (9%)
Query: 60 VGEGGFGSVYKGKLQDGT----VVAVKVLSVESKQGEKEFMSEVAS--MANICHENLVKL 113
+G+G FG V+ K G+ + A+KVL + + +++ + + H +VKL
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 114 HGGC-IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
H EG +I+ D+++ L L E F+ + +A L ++H
Sbjct: 92 HYAFQTEGKLYLIL-DFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHS-- 144
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAVS 230
I++RD+KP NILLD+ + K++DFGLSK E I H + GT+ Y+AP+
Sbjct: 145 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 231 GHLNPKSDIYSFGVLLLQIVTG 252
+D +SFGVL+ +++TG
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTG 222
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 156
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 157 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 209
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 210 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 148
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 149 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 201
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 202 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 18/202 (8%)
Query: 60 VGEGGFGSVY---KGKLQDGT--VVAVKVLSVES-KQGEKEFMSEVASMANICHENLVKL 113
+GEG FG V DGT +VAVK L + Q + E+ + + HE+++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 114 HGGCIEGPCRII--VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
G C + + + V +Y+ SL L A+ A++ I G+AY+H +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQ-----ICEGMAYLHAQ 136
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDYAV 229
+HR++ N+LLD + KI DFGL+K PE + R G + + AP+
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
SD++SFGV L +++T
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + +T + + + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD--LKTFM-DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ S+ + + + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 118
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 210
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 183
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI S G +
Sbjct: 184 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPV 236
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 237 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 23/228 (10%)
Query: 44 YNE-LKSATNGFCSSNKVGEGGFGSVYK------GKLQDGTVVAVKVLSVESKQGEKE-F 95
YNE + N +G G FG V + GK VAVK+L + EKE
Sbjct: 37 YNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEAL 96
Query: 96 MSEVASMANIC-HENLVKLHGGCIEGPCRIIVYDYMQNNSL-------SQTLLGEEKNRA 147
MSE+ M+++ HEN+V L G C G +++ +Y L S+ L +
Sbjct: 97 MSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 148 KFSWTARREI---ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKL 204
S + R++ + +A+G+A++ + + +HRD+ N+LL KI DFGL++
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHVAKIGDFGLARD 213
Query: 205 FPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
D +I A + ++AP+ +SD++S+G+LL +I +
Sbjct: 214 IMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 100/201 (49%), Gaps = 18/201 (8%)
Query: 60 VGEGGFGSVYKG-KLQDG----TVVAVKVLSVE-SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + DG VA+KVL S + KE + E MA + + +L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
G C+ +++ Q L +NR + + IA+G++Y+ E+++
Sbjct: 85 LGICLTSTVQLVT----QLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYL-EDVR 139
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG---TLGYLAPDYAVS 230
+VHRD+ N+L+ + KI+DFGL++L DI G + ++A + +
Sbjct: 140 --LVHRDLAARNVLVKSPNHVKITDFGLARLL--DIDETEYHADGGKVPIKWMALESILR 195
Query: 231 GHLNPKSDIYSFGVLLLQIVT 251
+SD++S+GV + +++T
Sbjct: 196 RRFTHQSDVWSYGVTVWELMT 216
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 20/202 (9%)
Query: 60 VGEGGFGSVYKGKLQDGT----VVAVKVLSVESKQGEKEFMSEVAS--MANICHENLVKL 113
+G+G FG V+ K G+ + A+KVL + + +++ + + H +VKL
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 114 HGGC-IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
H EG +I+ D+++ L L E F+ + +A L ++H
Sbjct: 93 HYAFQTEGKLYLIL-DFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHS-- 145
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAVS 230
I++RD+KP NILLD+ + K++DFGLSK E I H + GT+ Y+AP+
Sbjct: 146 -LGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 231 GHLNPKSDIYSFGVLLLQIVTG 252
+D +SFGVL+ +++TG
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTG 223
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 104/206 (50%), Gaps = 25/206 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLH 114
VG G +GSV Y +L+ VAVK LS +S + E+ + ++ HEN++
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI--- 90
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARRE----IALGIARGLAYIHE 170
G ++ + L TL+G + N S E + + RGL YIH
Sbjct: 91 -GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIH- 148
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAV 229
I+HRD+KPSN+ ++++ +I DFGL++ E++T +++TR Y AP+ +
Sbjct: 149 --SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIML 201
Query: 230 SG-HLNPKSDIYSFGVLLLQIVTGQA 254
+ H N DI+S G ++ +++ G+A
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 117/268 (43%), Gaps = 27/268 (10%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSVESKQGEKE-FMSEVASMANICHENLVKLH 114
+GEG FG VY+G + VAVK + KE FMSE M N+ H ++VKL
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G E P II+ Y L L E+N+ +L I + +AY+ E I
Sbjct: 80 GIIEEEPTWIIMELY-PYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYL-ESI-- 132
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
+ VHRDI NIL+ K+ DFGLS+ ++ + ++ + +++P+
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVDPMLCGNFSG 294
SD++ F V + +I++ F K+ ++ +E + +K L P LC
Sbjct: 193 TASDVWMFAVCMWEILS------FGKQ--PFFWLENKDVIGVLEKGDRLPKPDLCPPVLY 244
Query: 295 NEAVRFLKVGLLCVQEKSSLRPRMSTVI 322
R C S RPR + ++
Sbjct: 245 TLMTR-------CWDYDPSDRPRFTELV 265
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 117/268 (43%), Gaps = 27/268 (10%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSVESKQGEKE-FMSEVASMANICHENLVKLH 114
+GEG FG VY+G + VAVK + KE FMSE M N+ H ++VKL
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G E P II+ Y L L E+N+ +L I + +AY+ E I
Sbjct: 92 GIIEEEPTWIIMELY-PYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYL-ESI-- 144
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
+ VHRDI NIL+ K+ DFGLS+ ++ + ++ + +++P+
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVDPMLCGNFSG 294
SD++ F V + +I++ F K+ ++ +E + +K L P LC
Sbjct: 205 TASDVWMFAVCMWEILS------FGKQ--PFFWLENKDVIGVLEKGDRLPKPDLCPPVLY 256
Query: 295 NEAVRFLKVGLLCVQEKSSLRPRMSTVI 322
R C S RPR + ++
Sbjct: 257 TLMTR-------CWDYDPSDRPRFTELV 277
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ S+ + + + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 119
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 152
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+ +
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + +T + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDL--KTFM-DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 105/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ S+ + + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 66 GSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRII 125
G +Y K+ + K + E + E++ + + LV LH +
Sbjct: 82 GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF-----LVTLHYAFQTETKLHL 136
Query: 126 VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSN 185
+ DY+ L L R +F+ + I L ++H K I++RDIK N
Sbjct: 137 ILDYINGGELFTHL----SQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLEN 189
Query: 186 ILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV---SGHLNPKSDIYSF 242
ILLD N + ++DFGLSK F D T + GT+ Y+APD SGH + D +S
Sbjct: 190 ILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGH-DKAVDWWSL 248
Query: 243 GVLLLQIVTGQAAVHFDKE 261
GVL+ +++TG + D E
Sbjct: 249 GVLMYELLTGASPFTVDGE 267
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL + +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 60 VGEGGFGSVYKGKLQ----DGTVVAVKVLSVESKQGEKE-FMSEVASMANICHENLVKLH 114
+GEG FG VY+G + VAVK + KE FMSE M N+ H ++VKL
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G E P II+ Y L L E+N+ +L I + +AY+ E I
Sbjct: 76 GIIEEEPTWIIMELY-PYGELGHYL---ERNKNSLKVLTLVLYSLQICKAMAYL-ESI-- 128
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
+ VHRDI NIL+ K+ DFGLS+ ++ + ++ + +++P+
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 235 PKSDIYSFGVLLLQIVT 251
SD++ F V + +I++
Sbjct: 189 TASDVWMFAVCMWEILS 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 157
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG++ +DI S G +
Sbjct: 158 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----QDIYRASYYRKGGCAMLPV 210
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 211 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI D+GL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVLSVE-SKQGEKEFMSEVASMANICHENLVKLH-- 114
++G GGFG V + QD G VA+K E S + + + E+ M + H N+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 115 ----GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
++ +Y + L + L + +N R + I+ L Y+HE
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRK-YLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 171 EIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
I+HRD+KP NI+L Q KI D G +K D + T GTL YLAP+
Sbjct: 141 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPEL 195
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTG 252
D +SFG L + +TG
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++T ++TR Y AP+ ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 119 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 25/206 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 85 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 140
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG---TLGYLAPDYAV 229
I+HRD+KPSN+ ++++ KI DFGL++ H +AG T Y AP+ +
Sbjct: 141 --DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEIML 191
Query: 230 SG-HLNPKSDIYSFGVLLLQIVTGQA 254
+ H N DI+S G ++ +++TG+
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 25/206 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG---TLGYLAPDYAV 229
I+HRD+KPSN+ ++++ KI DFGL++ H +AG T Y AP+ +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEIML 195
Query: 230 SG-HLNPKSDIYSFGVLLLQIVTGQA 254
+ H N DI+S G ++ +++TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 117
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 118 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVLSVE-SKQGEKEFMSEVASMANICHENLVKLH-- 114
++G GGFG V + QD G VA+K E S + + + E+ M + H N+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 115 ----GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
++ +Y + L + L + +N R + I+ L Y+HE
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRK-YLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 171 EIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
I+HRD+KP NI+L Q KI D G +K D + T GTL YLAP+
Sbjct: 140 N---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQYLAPEL 194
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTG 252
D +SFG L + +TG
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 25/206 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG---TLGYLAPDYAV 229
I+HRD+KPSN+ ++++ KI DFGL++ H +AG T Y AP+ +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATRWYRAPEIML 195
Query: 230 SG-HLNPKSDIYSFGVLLLQIVTGQA 254
+ H N DI+S G ++ +++TG+
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 121
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 177
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 178 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 220
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+ +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLG 176
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 152
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 122
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+ +
Sbjct: 123 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLG 178
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 179 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 119
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 175
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 218
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLA 118
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 174
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 217
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+ +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEILLG 176
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 149
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 149
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 210 KSSDLWALGCIIYQLVAG 227
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 104/223 (46%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + + + + +GLA
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKD---FMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 118 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 173
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 134
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 195 KSSDLWALGCIIYQLVAG 212
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 13/199 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG---EKEFMSEVASMANICHENLVKLHGG 116
+GEG G V + + T AV V V+ K+ + E+ + HEN+VK +G
Sbjct: 14 LGEGAAGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
EG + + +Y L + E + A+R +A G+ Y+H I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRI---EPDIGMPEPDAQRFFHQLMA-GVVYLH---GIGI 125
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFP-EDITHISTRVAGTLGYLAPDYAVSGHLNP 235
HRDIKP N+LLD+ N KISDFGL+ +F + + ++ GTL Y+AP+ +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
+ D++S G++L ++ G+
Sbjct: 186 EPVDVWSCGIVLTAMLAGE 204
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 15/197 (7%)
Query: 58 NKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGEK-EFMSEVASMANICHENLVKLHG 115
++G G FG V+ G+L+ D T+VAVK K +F+ E + H N+V+L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
C + IV + +Q T L E R + ++ A G+ Y+ +
Sbjct: 180 VCTQKQPIYIVMELVQGGDFL-TFLRTEGARLRVK--TLLQMVGDAAAGMEYLESK---C 233
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG----TLGYLAPDYAVSG 231
+HRD+ N L+ + KISDFG+S+ E+ + G + + AP+ G
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYG 290
Query: 232 HLNPKSDIYSFGVLLLQ 248
+ +SD++SFG+LL +
Sbjct: 291 RYSSESDVWSFGILLWE 307
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 76 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 128
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 188
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 189 KSSDLWALGCIIYQLVAG 206
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC--HENLVKLHGG 116
+GEG F K + AVK++S K+ E E+ ++ +C H N+VKLH
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIIS---KRMEANTQKEITAL-KLCEGHPNIVKLHEV 74
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
+ +V + + L + + K + FS T I + ++++H+ +
Sbjct: 75 FHDQLHTFLVMELLNGGELFERI----KKKKHFSETEASYIMRKLVSAVSHMHD---VGV 127
Query: 177 VHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
VHRD+KP N+L + N KI DFG ++L P D + T TL Y AP+
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCF-TLHYAAPELLNQNGY 186
Query: 234 NPKSDIYSFGVLLLQIVTGQ 253
+ D++S GV+L +++GQ
Sbjct: 187 DESCDLWSLGVILYTMLSGQ 206
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 76
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 77 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 129
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 189
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 190 KSSDLWALGCIIYQLVAG 207
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK + + G VVA+K L E++ + E++ + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GL++ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLSFCHS 121
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 75 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 127
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 187
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 188 KSSDLWALGCIIYQLVAG 205
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 104
Query: 116 GCIEGPCRIIV-YDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
C + ++ Y +N L + + + F T R I L Y+H +
Sbjct: 105 -CFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK--- 156
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 234 NPKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 217 CKSSDLWALGCIIYQLVAG 235
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMA 103
K F +GEG F +V + L A+K+L K+ + +++ E M+
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
+ H VKL+ + Y +N L + + + F T R I
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVS 121
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGY 222
L Y+H + I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y
Sbjct: 122 ALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
++P+ SD+++ G ++ Q+V G
Sbjct: 179 VSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 150
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 152
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 150
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 104/222 (46%), Gaps = 31/222 (13%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANICHENLVKLHG 115
+G+G F V + + G VAVK++ + S +K F EV M + H N+VKL
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 73
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLG-----EEKNRAKFSWTARREIALGIARGLAYIHE 170
+V +Y + L+ E++ RAKF I + Y H+
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---------QIVSAVQYCHQ 124
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD-YAV 229
+ IVHRD+K N+LLD + N KI+DFG S F + G+ Y AP+ +
Sbjct: 125 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQG 179
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFD----KELGEYYL 267
+ P+ D++S GV+L +V+G ++ FD KEL E L
Sbjct: 180 KKYDGPEVDVWSLGVILYTLVSG--SLPFDGQNLKELRERVL 219
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 152
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 152
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 153
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 150
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 136/285 (47%), Gaps = 32/285 (11%)
Query: 59 KVGEGGFGSVY--KGKLQ--DGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLH 114
K+G G +G V + K+ + + ++ SV + K + EVA + + H N++KL+
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLDHPNIMKLY 102
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V + + L ++ +R KF+ I + G+ Y+H K
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEII----HRMKFNEVDAAVIIKQVLSGVTYLH---KH 155
Query: 175 SIVHRDIKPSNILLDQNFNP---KISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
+IVHRD+KP N+LL+ KI DFGLS +F E+ + R+ GT Y+AP+ +
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPE-VLRK 212
Query: 232 HLNPKSDIYSFGVLLLQIVTGQAAV--HFDKEL------GEYYLVEKAWEMHNTDKLQHL 283
+ K D++S GV+L ++ G D+E+ G+Y W+ + ++ + L
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWK-NVSEGAKDL 271
Query: 284 VDPMLCGN----FSGNEAVRFLKVGLLCVQEKSSLR-PRMSTVIE 323
+ ML + S +A+ + +C +++S + P ++ IE
Sbjct: 272 IKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIE 316
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 153
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 214 KSSDLWALGCIIYQLVAG 231
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 47/289 (16%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMANICHE-NLVKLH 114
+GEG FG V K +++ DG + + ++ SK ++F E+ + + H N++ L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 115 GGC---------IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI---ALGIA 162
G C IE + D+++ + + +T + S + +++ A +A
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGY 222
RG+ Y+ ++ +HRD+ NIL+ +N+ KI+DFGLS+ V T+G
Sbjct: 143 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGR 192
Query: 223 LAPDYAVSGHLN-----PKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNT 277
L + LN SD++S+GVLL +IV+ + E Y EK + +
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY--EKLPQGYRL 250
Query: 278 DKLQHLVDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
+K P+ C +E ++ C +EK RP + ++ +N
Sbjct: 251 EK------PLNC----DDEVYDLMRQ---CWREKPYERPSFAQILVSLN 286
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 9/194 (4%)
Query: 58 NKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGEK-EFMSEVASMANICHENLVKLHG 115
++G G FG V+ G+L+ D T+VAVK K +F+ E + H N+V+L G
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
C + IV + +Q T L E R + ++ A G+ Y+ +
Sbjct: 180 VCTQKQPIYIVMELVQGGDFL-TFLRTEGARLRVK--TLLQMVGDAAAGMEYLESK---C 233
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT-LGYLAPDYAVSGHLN 234
+HRD+ N L+ + KISDFG+S+ + + S + + + AP+ G +
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 235 PKSDIYSFGVLLLQ 248
+SD++SFG+LL +
Sbjct: 294 SESDVWSFGILLWE 307
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANICHENLVKLHG 115
+G+G F V + + G VAVK++ + S +K F EV M + H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 80
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+V +Y + L+ + + K + R+I + Y H++
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YCHQKF--- 133
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD-YAVSGHLN 234
IVHRD+K N+LLD + N KI+DFG S F + G+ Y AP+ + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFD----KELGEYYL 267
P+ D++S GV+L +V+G ++ FD KEL E L
Sbjct: 192 PEVDVWSLGVILYTLVSG--SLPFDGQNLKELRERVL 226
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 103/217 (47%), Gaps = 21/217 (9%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANICHENLVKLHG 115
+G+G F V + + G VAVK++ + S +K F EV M + H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 80
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+V +Y + L+ + + K + R+I + Y H++
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YCHQKF--- 133
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD-YAVSGHLN 234
IVHRD+K N+LLD + N KI+DFG S F + G+ Y AP+ + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFD----KELGEYYL 267
P+ D++S GV+L +V+G ++ FD KEL E L
Sbjct: 192 PEVDVWSLGVILYTLVSG--SLPFDGQNLKELRERVL 226
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMA 103
K + F +G+G FG+VY + Q+ ++A+KVL +E + E + E+ +
Sbjct: 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
++ H N+++++ + ++ ++ L + L + +F +A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELAD 125
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
L Y HE ++HRDIKP N+L+ KI+DFG S P + + GTL YL
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYL 179
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
P+ + K D++ GVL + + G
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 152
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 213 KSSDLWALGCIIYQLVAG 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F +V + L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 103 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 155
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 216 KSSDLWALGCIIYQLVAG 233
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMA 103
K + F +G+G FG+VY + Q+ ++A+KVL +E + E + E+ +
Sbjct: 11 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 70
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
++ H N+++++ + ++ ++ L + L + +F +A
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELAD 126
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
L Y HE ++HRDIKP N+L+ KI+DFG S P + + GTL YL
Sbjct: 127 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYL 180
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
P+ + K D++ GVL + + G
Sbjct: 181 PPEMIEGKTHDEKVDLWCAGVLCYEFLVG 209
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 111
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 112 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 165
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DFGL++ +++ +++TR Y AP+ ++
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----WYRAPEIMLNW 220
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 107/210 (50%), Gaps = 21/210 (10%)
Query: 54 FCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENL 110
+ + + VG G +GSV ++ G +AVK LS +S K E+ + ++ HEN+
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLA 166
+ G ++ + + L L+G + N K + + + I RGL
Sbjct: 113 I----GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLK 168
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAP 225
YIH I+HRD+KPSN+ ++++ KI DFGL++ +++T +++TR Y AP
Sbjct: 169 YIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----WYRAP 220
Query: 226 DYAVSG-HLNPKSDIYSFGVLLLQIVTGQA 254
+ ++ H N DI+S G ++ +++TG+
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 47/289 (16%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMANICHE-NLVKLH 114
+GEG FG V K +++ DG + + ++ SK ++F E+ + + H N++ L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 115 GGC---------IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI---ALGIA 162
G C IE + D+++ + + +T + S + +++ A +A
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGY 222
RG+ Y+ ++ +HRD+ NIL+ +N+ KI+DFGLS+ V T+G
Sbjct: 153 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGR 202
Query: 223 LAPDYAVSGHLN-----PKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNT 277
L + LN SD++S+GVLL +IV+ + E Y EK + +
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY--EKLPQGYRL 260
Query: 278 DKLQHLVDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
+K P+ C +E ++ C +EK RP + ++ +N
Sbjct: 261 EK------PLNC----DDEVYDLMRQ---CWREKPYERPSFAQILVSLN 296
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAV-KVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G+G FG VYK + ++ +V+A KV+ +S++ +++M E+ +A+ H N+VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I+ ++ ++ +L E+ + + + + L Y+H+ I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV--SGHLNP 235
HRD+K NIL + + K++DFG+S I + + GT ++AP+ + + P
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMCETSKDRP 216
Query: 236 ---KSDIYSFGVLLLQIVTGQAAVH 257
K+D++S G+ L+++ + H
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 111/249 (44%), Gaps = 25/249 (10%)
Query: 72 KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQ 131
K +D T +S++SK + F +E+ + +I +E + G I+Y+YM+
Sbjct: 69 KKRDFTKSNNDKISIKSKYDD--FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYME 126
Query: 132 NNSL---SQTLLGEEKNRAKF-SWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNIL 187
N+S+ + +KN F + I + +YIH E +I HRD+KPSNIL
Sbjct: 127 NDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNIL 184
Query: 188 LDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG---YLAPDYAV--SGHLNPKSDIYSF 242
+D+N K+SDFG S+ + ++ G+ G ++ P++ S + K DI+S
Sbjct: 185 MDKNGRVKLSDFGESEYM------VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238
Query: 243 GVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVDPML------CGNFSGNE 296
G+ L + L E + + + H + P+ NF NE
Sbjct: 239 GICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNE 298
Query: 297 AVRFLKVGL 305
+ FLK+ L
Sbjct: 299 DIDFLKLFL 307
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 105/205 (51%), Gaps = 13/205 (6%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAV-KVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G+G FG VYK + ++ +V+A KV+ +S++ +++M E+ +A+ H N+VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I+ ++ ++ +L E+ + + + + L Y+H+ I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV--SGHLNP 235
HRD+K NIL + + K++DFG+S I + + GT ++AP+ + + P
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMCETSKDRP 216
Query: 236 ---KSDIYSFGVLLLQIVTGQAAVH 257
K+D++S G+ L+++ + H
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 99/203 (48%), Gaps = 24/203 (11%)
Query: 60 VGEGGFGSV-YKGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHENLVKLHGGC 117
+G GGF V + G +VA+K++ + + +E+ ++ N+ H+++ +L+
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH-V 76
Query: 118 IEGPCRI-IVYDYMQNNSL-----SQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
+E +I +V +Y L SQ L EE+ R F I +AY+H +
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---------QIVSAVAYVHSQ 127
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGL-SKLFPEDITHISTRVAGTLGYLAPDYAV- 229
HRD+KP N+L D+ K+ DFGL +K H+ T G+L Y AP+
Sbjct: 128 ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQG 183
Query: 230 SGHLNPKSDIYSFGVLLLQIVTG 252
+L ++D++S G+LL ++ G
Sbjct: 184 KSYLGSEADVWSMGILLYVLMCG 206
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKG--KLQDGTVVAVKV-LSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK KL V K+ L E++ + E++ + + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 122 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 177
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 178 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 216
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 54 FCSSNKVGEGGFGSVYKG--KLQDGTVVAVKV-LSVESKQGEKEFMSEVASMANICHENL 110
F K+GEG +G VYK KL V K+ L E++ + E++ + + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
VKL +V++++ + L + + + + + +GLA+ H
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD-LKKFM--DASALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
++HRD+KP N+L++ K++DFGL++ F + + V TL Y AP+ +
Sbjct: 121 H---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEILLG 176
Query: 231 -GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 197
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI G +
Sbjct: 198 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPV 250
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 251 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMA 103
K + F +G+G FG+VY + Q+ ++A+KVL +E + E + E+ +
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
++ H N+++++ + ++ ++ L + L + +F +A
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGRFDEQRSATFMEELAD 125
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
L Y HE ++HRDIKP N+L+ KI+DFG S P + + GTL YL
Sbjct: 126 ALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYL 179
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
P+ + K D++ GVL + + G
Sbjct: 180 PPEMIEGKTHDEKVDLWCAGVLCYEFLVG 208
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGS-VYKGKLQDGTVVAVKVLSVES--KQGEKEFMS-EVASMANICHENLVKLHG 115
+GEG F + V +L A+K+L K+ + +++ E M+ + H VKL+
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ Y +N L + + + F T R I L Y+H +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI----RKIGSFDETCTRFYTAEIVSALEYLHGK---G 150
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSK-LFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I+HRD+KP NILL+++ + +I+DFG +K L PE + GT Y++P+
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 235 PKSDIYSFGVLLLQIVTG 252
SD+++ G ++ Q+V G
Sbjct: 211 KSSDLWALGCIIYQLVAG 228
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 27/211 (12%)
Query: 60 VGEGGFGSVYKGKLQ------DGTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVK 112
+G G FG VY+G++ VAVK L V S+Q E +F+ E ++ H+N+V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYI 168
G ++ R I+ + M L ++ L E + R + + +A IA G Y+
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDL-KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYL 174
Query: 169 HEEIKPSIVHRDIKPSNILLD---QNFNPKISDFGLSKLFPEDITHISTRVAG-----TL 220
E +HRDI N LL KI DFG+++ DI G +
Sbjct: 175 EEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPV 227
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++ P+ + G K+D +SFGVLL +I +
Sbjct: 228 KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 31/222 (13%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANICHENLVKLHG 115
+G+G F V + + G VAV+++ + S +K F EV M + H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 80
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLG-----EEKNRAKFSWTARREIALGIARGLAYIHE 170
+V +Y + L+ E++ RAKF I + Y H+
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---------IVSAVQYCHQ 131
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD-YAV 229
+ IVHRD+K N+LLD + N KI+DFG S F + G+ Y AP+ +
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDEFCGSPPYAAPELFQG 186
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFD----KELGEYYL 267
+ P+ D++S GV+L +V+G ++ FD KEL E L
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSG--SLPFDGQNLKELRERVL 226
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVK--VLSVESKQGEKEFMSEVASMANIC 106
+ F K+GEG +G VYK + + G VVA+K L E++ + E++ + +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+VKL +V++++ + L + + + + + +GLA
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFM--DASALTGIPLPLIKSYLFQLLQGLA 120
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ H ++HRD+KP N+L++ K++DFGL++ F + V TL Y AP+
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPE 176
Query: 227 YAVS-GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
+ + + DI+S G + ++VT +A D E+ + + +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 219
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 25/206 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLH 114
VG G +GSV Y +L+ VAVK LS +S + E+ + ++ HEN++
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI--- 82
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARRE----IALGIARGLAYIHE 170
G ++ + L TL+G + N E + + RGL YIH
Sbjct: 83 -GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH- 140
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAV 229
I+HRD+KPSN+ ++++ +I DFGL++ E++T +++TR Y AP+ +
Sbjct: 141 --SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----WYRAPEIML 193
Query: 230 SG-HLNPKSDIYSFGVLLLQIVTGQA 254
+ H N DI+S G ++ +++ G+A
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G E P II M+ +L + + + + A ++ LAY+ +
Sbjct: 78 GVITENPVWII----MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 130
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
VHRDI N+L+ N K+ DFGLS+ + + +++ + ++AP+
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 235 PKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 25/206 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLH 114
VG G +GSV Y +L+ VAVK LS +S + E+ + ++ HEN++
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVI--- 90
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHE 170
G ++ + L TL+G + N S + + + RGL YIH
Sbjct: 91 -GLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIH- 148
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAV 229
I+HRD+KPSN+ ++++ +I DFGL++ E++T +++TR Y AP+ +
Sbjct: 149 --SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----WYRAPEIML 201
Query: 230 SG-HLNPKSDIYSFGVLLLQIVTGQA 254
+ H N DI+S G ++ +++ G+A
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 102/217 (47%), Gaps = 21/217 (9%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANICHENLVKLHG 115
+G+G F V + + G VAVK++ + S +K F EV M + H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 80
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+V +Y + L+ + + K + R+I + Y H++
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ----YCHQKF--- 133
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD-YAVSGHLN 234
IVHRD+K N+LLD + N KI+DFG S F + G Y AP+ + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFD----KELGEYYL 267
P+ D++S GV+L +V+G ++ FD KEL E L
Sbjct: 192 PEVDVWSLGVILYTLVSG--SLPFDGQNLKELRERVL 226
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEF---MSEVASMANICHEN 109
F ++G G FG+VY + +++ VVA+K +S KQ +++ + EV + + H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 110 LVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
++ G + +V +Y S S L +K + A + G +GLAY+H
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLH 171
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
+++HRD+K NILL + K+ DFG + I + GT ++AP+ +
Sbjct: 172 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSAS-----IMAPANXFVGTPYWMAPEVIL 223
Query: 230 S---GHLNPKSDIYSFGVLLLQIV 250
+ G + K D++S G+ +++
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELA 247
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 19/203 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEF---MSEVASMANICHEN 109
F ++G G FG+VY + +++ VVA+K +S KQ +++ + EV + + H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 110 LVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
++ G + +V +Y S S L +K + A + G +GLAY+H
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAA---VTHGALQGLAYLH 132
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
+++HRD+K NILL + K+ DFG + I + GT ++AP+ +
Sbjct: 133 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSAS-----IMAPANXFVGTPYWMAPEVIL 184
Query: 230 S---GHLNPKSDIYSFGVLLLQI 249
+ G + K D++S G+ +++
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIEL 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G E P II M+ +L + + + + A ++ LAY+ +
Sbjct: 78 GVITENPVWII----MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 130
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
VHRDI N+L+ N K+ DFGLS+ + + +++ + ++AP+
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 235 PKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 110/242 (45%), Gaps = 35/242 (14%)
Query: 45 NELKSATN------GFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVE--SKQGEKEF 95
N + SAT+ + +G+G F V + + G VAVK++ + ++
Sbjct: 2 NSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKL 61
Query: 96 MSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG-----EEKNRAKFS 150
EV M + H N+VKL +V +Y + L+ E++ RAKF
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR 121
Query: 151 WTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT 210
I + Y H++ IVHRD+K N+LLD + N KI+DFG S F +
Sbjct: 122 Q---------IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFT--VG 167
Query: 211 HISTRVAGTLGYLAPD-YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFD----KELGEY 265
+ G+ Y AP+ + + P+ D++S GV+L +V+G ++ FD KEL E
Sbjct: 168 NKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSG--SLPFDGQNLKELRER 225
Query: 266 YL 267
L
Sbjct: 226 VL 227
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 29/254 (11%)
Query: 51 TNGFCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENL 110
++ F +++G G VY+ K Q GT + ++ +K +E+ + + H N+
Sbjct: 52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 111 VKLHGGCIEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
+KL E P I +V + + L ++ + +S + I +AY+H
Sbjct: 111 IKLKE-IFETPTEISLVLELVTGGELFDRIV----EKGYYSERDAADAVKQILEAVAYLH 165
Query: 170 EEIKPSIVHRDIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
E IVHRD+KP N+L + KI+DFGLSK+ + + V GT GY AP+
Sbjct: 166 EN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--LMKTVCGTPGYCAPE 220
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH--------FDKELG-EYYLVEKAWE---M 274
P+ D++S G++ ++ G + F + L EYY + W+ +
Sbjct: 221 ILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSL 280
Query: 275 HNTDKLQHLV--DP 286
+ D ++ L+ DP
Sbjct: 281 NAKDLVRKLIVLDP 294
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 104/205 (50%), Gaps = 13/205 (6%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAV-KVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G+G FG VYK + ++ +V+A KV+ +S++ +++M E+ +A+ H N+VKL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I+ ++ ++ +L E+ + + + + L Y+H+ I+
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLHDN---KII 157
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV--SGHLNP 235
HRD+K NIL + + K++DFG+S I + GT ++AP+ + + P
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMCETSKDRP 216
Query: 236 ---KSDIYSFGVLLLQIVTGQAAVH 257
K+D++S G+ L+++ + H
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHH 241
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 104/222 (46%), Gaps = 31/222 (13%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANICHENLVKLHG 115
+G+G F V + + G VAV+++ + S +K F EV M + H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF-REVRIMKVLNHPNIVKLFE 80
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLG-----EEKNRAKFSWTARREIALGIARGLAYIHE 170
+V +Y + L+ E++ RAKF I + Y H+
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQ---------IVSAVQYCHQ 131
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD-YAV 229
+ IVHRD+K N+LLD + N KI+DFG S F + G+ Y AP+ +
Sbjct: 132 KF---IVHRDLKAENLLLDADMNIKIADFGFSNEFT--FGNKLDTFCGSPPYAAPELFQG 186
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQAAVHFD----KELGEYYL 267
+ P+ D++S GV+L +V+G ++ FD KEL E L
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSG--SLPFDGQNLKELRERVL 226
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G E P II M+ +L + + + + A ++ LAY+ +
Sbjct: 106 GVITENPVWII----MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 158
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
VHRDI N+L+ N K+ DFGLS+ + + +++ + ++AP+
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 235 PKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKN---RAKFSWTARREI--ALGIARGLAYIH 169
G E P II + LGE ++ KFS I A ++ LAY+
Sbjct: 458 GVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
+ VHRDI N+L+ N K+ DFGLS+ + + +++ + ++AP+
Sbjct: 509 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 230 SGHLNPKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G E P II M+ +L + + + + A ++ LAY+ +
Sbjct: 75 GVITENPVWII----MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 127
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
VHRDI N+L+ N K+ DFGLS+ + + +++ + ++AP+
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 235 PKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKN---RAKFSWTARREI--ALGIARGLAYIH 169
G E P II + LGE ++ KFS I A ++ LAY+
Sbjct: 78 GVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
+ VHRDI N+L+ N K+ DFGLS+ + +++ + ++AP+
Sbjct: 129 SK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESIN 185
Query: 230 SGHLNPKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI-NDI 93
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G E P II M+ +L + + + + A ++ LAY+ +
Sbjct: 83 GVITENPVWII----MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 135
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
VHRDI N+L+ N K+ DFGLS+ + + +++ + ++AP+
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 235 PKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G E P II M+ +L + + + + A ++ LAY+ +
Sbjct: 80 GVITENPVWII----MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 132
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
VHRDI N+L+ N K+ DFGLS+ + + +++ + ++AP+
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 192
Query: 235 PKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 193 SASDVWMFGVCMWEIL 208
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI FGL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI DF L++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 109 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 164
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG---TLGYLAPDYAV 229
I+HRD+KPSN+ ++++ KI DFGL++ H + G T Y AP+ +
Sbjct: 165 --DIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRAPEIML 215
Query: 230 SG-HLNPKSDIYSFGVLLLQIVTGQA 254
+ H N DI+S G ++ +++TG+
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI D GL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 90/196 (45%), Gaps = 12/196 (6%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
G E P II M+ +L + + + + A ++ LAY+ +
Sbjct: 81 GVITENPVWII----MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK--- 133
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
VHRDI N+L+ N K+ DFGLS+ + + +++ + ++AP+
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFT 193
Query: 235 PKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 194 SASDVWMFGVCMWEIL 209
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 51 TNGFCSSNKVGEGGFGSVY--KGKLQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
++ + K+G G +G V K KL G A+K++ SV + + EVA + +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N++KL+ + +V + + L ++ R KFS I + G
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII----LRQKFSEVDAAVIMKQVLSGT 117
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNP---KISDFGLSKLFPEDITHISTRVAGTLGY 222
Y+H K +IVHRD+KP N+LL+ KI DFGLS F ++ GT Y
Sbjct: 118 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYY 172
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ + + K D++S GV+L ++ G
Sbjct: 173 IAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 109/222 (49%), Gaps = 45/222 (20%)
Query: 60 VGEGGFGSV-----YKGKLQDGTVVAVKVLSVESKQGEKEFMS---EVASMANICHENLV 111
+GEG FG V YK + + VA+K +S + + M E++ + + H +++
Sbjct: 17 LGEGSFGKVKLATHYKTQQK----VALKFISRQLLKKSDMHMRVEREISYLKLLRHPHII 72
Query: 112 KLHGGCIEGPCRII---------VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
KL+ I P I+ ++DY+ + + + E++ R F I
Sbjct: 73 KLYD-VITTPTDIVMVIEYAGGELFDYI----VEKKRMTEDEGRRFFQ---------QII 118
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGY 222
+ Y H + IVHRD+KP N+LLD N N KI+DFGLS + D + T G+ Y
Sbjct: 119 CAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM-TDGNFLKTS-CGSPNY 173
Query: 223 LAPDYAVSGHL--NPKSDIYSFGVLLLQIVTGQAAVHFDKEL 262
AP+ ++G L P+ D++S G++L ++ G+ + FD E
Sbjct: 174 AAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGR--LPFDDEF 212
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA- 144
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI D GL++ +++T +++TR Y AP+ ++
Sbjct: 145 --DIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 108/239 (45%), Gaps = 32/239 (13%)
Query: 42 FSYNE-LKSATNGFCSSNKVGEGGFGSVYK------GKLQDGTVVAVKVLSVESKQGEKE 94
YNE + N +G G FG V + GK VAVK+L + EKE
Sbjct: 20 LPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKE 79
Query: 95 -FMSEVASMANIC-HENLVKLHGGCIEGPCRIIVYDYMQNNSL-------SQTLLG---- 141
MSE+ M+++ HEN+V L G C G +++ +Y L ++ +LG
Sbjct: 80 ALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLA 139
Query: 142 --------EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFN 193
++++ + +A+G+A++ + + +HRD+ N+LL
Sbjct: 140 PGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGHV 196
Query: 194 PKISDFGLSKLFPEDITHISTRVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
KI DFGL++ D +I A + ++AP+ +SD++S+G+LL +I +
Sbjct: 197 AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQDGT-VVAVKVL---SVESKQGEKEFMSEVASMANICH 107
+ F +G+G FG+VY + + +VA+KVL +E + E + E+ A++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 108 ENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAY 167
N+++L+ + ++ +Y L + L + F I +A L Y
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMY 138
Query: 168 IHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
H + ++HRDIKP N+LL KI+DFG S P + + GTL YL P+
Sbjct: 139 CHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRRKTMCGTLDYLPPEM 192
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTG 252
N K D++ GVL +++ G
Sbjct: 193 IEGRMHNEKVDLWCIGVLCYELLVG 217
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 139/317 (43%), Gaps = 32/317 (10%)
Query: 24 GANFFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVK 82
G + + +G + + + F N ++ + ++G+G F V + G A K
Sbjct: 1 GPHMASMTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAK 60
Query: 83 VLSVESKQGEKEFMSEVASMANIC----HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQT 138
+++ + K ++F ++ A IC H N+V+LH E +V+D + L +
Sbjct: 61 IINTK-KLSARDFQ-KLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 118
Query: 139 LLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP---K 195
++ R +S I +AY H IVHR++KP N+LL K
Sbjct: 119 IVA----REFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVK 171
Query: 196 ISDFGLS-KLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG-- 252
++DFGL+ ++ + H AGT GYL+P+ + DI++ GV+L ++ G
Sbjct: 172 LADFGLAIEVNDSEAWH---GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 228
Query: 253 ------QAAVHFDKELGEYYLVEKAWEMHNTDKLQHLVDPMLCGNFSGN-EAVRFLKVGL 305
Q ++ + G Y W+ T + + L+D ML N A + LKV
Sbjct: 229 PFWDEDQHRLYAQIKAGAYDYPSPEWDT-VTPEAKSLIDSMLTVNPKKRITADQALKVPW 287
Query: 306 LCVQEK-SSLRPRMSTV 321
+C +E+ +S R TV
Sbjct: 288 ICNRERVASAIHRQDTV 304
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 60 VGEGGFGSV---YKGKLQDGT--VVAVKVLSVES-KQGEKEFMSEVASMANICHENLVKL 113
+GEG FG V DGT +VAVK L Q + E+ + + HE++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 114 HGGCIEGPCRII--VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
G C + + + V +Y+ SL L A+ A++ I G+AY+H +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQ 130
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDYAV 229
+HR + N+LLD + KI DFGL+K PE + R G + + AP+
Sbjct: 131 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
SD++SFGV L +++T
Sbjct: 188 ECKFYYASDVWSFGVTLYELLT 209
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 19/210 (9%)
Query: 51 TNGFCSSNKVGEGGFGSVY--KGKLQDGTVVAVKVL---SVESKQGEKEFMSEVASMANI 105
++ + K+G G +G V K KL G A+K++ SV + + EVA + +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLT-GAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N++KL+ + +V + + L ++ R KFS I + G
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEII----LRQKFSEVDAAVIMKQVLSGT 134
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQNFNP---KISDFGLSKLFPEDITHISTRVAGTLGY 222
Y+H K +IVHRD+KP N+LL+ KI DFGLS F ++ GT Y
Sbjct: 135 TYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYY 189
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ + + K D++S GV+L ++ G
Sbjct: 190 IAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 60 VGEGGFGSV---YKGKLQDGT--VVAVKVLSVES-KQGEKEFMSEVASMANICHENLVKL 113
+GEG FG V DGT +VAVK L Q + E+ + + HE++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 114 HGGCIEGPCRII--VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
G C + + + V +Y+ SL L A+ A++ I G+AY+H +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQ-----ICEGMAYLHAQ 131
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDYAV 229
+HR + N+LLD + KI DFGL+K PE + R G + + AP+
Sbjct: 132 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 230 SGHLNPKSDIYSFGVLLLQIVT 251
SD++SFGV L +++T
Sbjct: 189 ECKFYYASDVWSFGVTLYELLT 210
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 24/238 (10%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVL--SVESKQGEKEFMS---EVASMANICHENLVKL 113
+G G FG+V+KG + +G + + V +E K G + F + + ++ ++ H ++V+L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
G C G +V Y+ SL + ++R + IA+G+ Y+ E
Sbjct: 81 LGLC-PGSSLQLVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQIAKGMYYLEEH-- 134
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT-LGYLAPDYAVSGH 232
+VHR++ N+LL +++DFG++ L P D + A T + ++A + G
Sbjct: 135 -GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKLQHLVDPMLC 289
+SD++S+GV + +++T A + L E L+EK + L P +C
Sbjct: 194 YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG---------ERLAQPQIC 242
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 104/228 (45%), Gaps = 18/228 (7%)
Query: 54 FCSSNKVGEGGFGSVYKGKL--QDGTVV--AVKVLSVE--SKQGEKEFMSEVASMANICH 107
F +G+G FGSV + +L +DG+ V AVK+L + + +EF+ E A M H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 108 ENLVKLHGGCIEG------PCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI--AL 159
++ KL G + P +++ +M++ L LL F+ + + +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 160 GIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLS-KLFPEDITHISTRVAG 218
IA G+ Y+ + +HRD+ N +L ++ ++DFGLS K++ D
Sbjct: 145 DIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 219 TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY 266
+ +LA + SD+++FGV + +I+T + E E Y
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIY 249
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 113/238 (47%), Gaps = 24/238 (10%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVL--SVESKQGEKEFMS---EVASMANICHENLVKL 113
+G G FG+V+KG + +G + + V +E K G + F + + ++ ++ H ++V+L
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 98
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
G C G +V Y+ SL + ++R + IA+G+ Y+ E
Sbjct: 99 LGLC-PGSSLQLVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQIAKGMYYLEEH-- 152
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT-LGYLAPDYAVSGH 232
+VHR++ N+LL +++DFG++ L P D + A T + ++A + G
Sbjct: 153 -GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYY-LVEKAWEMHNTDKLQHLVDPMLC 289
+SD++S+GV + +++T A + L E L+EK + L P +C
Sbjct: 212 YTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKG---------ERLAQPQIC 260
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 104/204 (50%), Gaps = 21/204 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +GSV + G VAVK LS +S K E+ + ++ HEN++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNR----AKFSWTARREIALGIARGLAYIHEEI 172
+ P R + + + L L+G + N K + + + I RGL YIH
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 173 KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSG 231
I+HRD+KPSN+ ++++ KI D GL++ +++T +++TR Y AP+ ++
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----WYRAPEIMLNW 197
Query: 232 -HLNPKSDIYSFGVLLLQIVTGQA 254
H N DI+S G ++ +++TG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 19/216 (8%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHGG 116
+G+G F V + + G VA+K++ + ++ EV M + H N+VKL
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
++ +Y + L+ + + K + + R+I + Y H++ I
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----YCHQK---RI 132
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD-YAVSGHLNP 235
VHRD+K N+LLD + N KI+DFG S F + G+ Y AP+ + + P
Sbjct: 133 VHRDLKAENLLLDADMNIKIADFGFSNEFT--VGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 236 KSDIYSFGVLLLQIVTGQAAVHFD----KELGEYYL 267
+ D++S GV+L +V+G ++ FD KEL E L
Sbjct: 191 EVDVWSLGVILYTLVSG--SLPFDGQNLKELRERVL 224
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 93
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 151 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 93
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 60 VGEGGFGSVYKGKLQDGT-VVAVKVLSVESKQGEKE---FMSEVASMANICHENLVKLHG 115
+G G FG V KL++ V A+K+L+ E F E + N + + LH
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR-----AKFSWTARREIALGIARGLAYIHE 170
+ +V DY L TLL + ++R A+F + A IA+ L Y
Sbjct: 142 AFQDDNNLYLVMDYYVGGDL-LTLLSKFEDRLPEEMARF-YLAEMVIAIDSVHQLHY--- 196
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
VHRDIKP NIL+D N + +++DFG ED T S+ GT Y++P+ +
Sbjct: 197 ------VHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 231 -----GHLNPKSDIYSFGVLLLQIVTGQAAVH 257
G P+ D +S GV + +++ G+ +
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 47/289 (16%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMANICHE-NLVKLH 114
+GEG FG V K +++ DG + + ++ SK ++F E+ + + H N++ L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 115 GGC---------IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI---ALGIA 162
G C IE + D+++ + + +T + S + +++ A +A
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGY 222
RG+ Y+ ++ +HR++ NIL+ +N+ KI+DFGLS+ V T+G
Sbjct: 150 RGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGR 199
Query: 223 LAPDYAVSGHLN-----PKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKAWEMHNT 277
L + LN SD++S+GVLL +IV+ + E Y EK + +
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY--EKLPQGYRL 257
Query: 278 DKLQHLVDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMIN 326
+K P+ C +E ++ C +EK RP + ++ +N
Sbjct: 258 EK------PLNC----DDEVYDLMRQ---CWREKPYERPSFAQILVSLN 293
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 94
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 151
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 211
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 212 KSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 95
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 152
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 153 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 212
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 213 KSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 86
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 143
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 144 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 203
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 204 KSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 93
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 87
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 144
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 205 KSIDIWSVGCILAEMLSNR 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 87
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 144
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 145 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 204
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 205 KSIDIWSVGCILAEMLSNR 223
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 113/226 (50%), Gaps = 15/226 (6%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSV----ESKQG-EKEFMSEV 99
++KS + + +GEG F +VYK + ++ +VA+K + + E+K G + + E+
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 100 ASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIAL 159
+ + H N++ L +V+D+M+ + + ++ + N + + + L
Sbjct: 64 KLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDL--EVIIKD--NSLVLTPSHIKAYML 119
Query: 160 GIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT 219
+GL Y+H+ I+HRD+KP+N+LLD+N K++DFGL+K F +V T
Sbjct: 120 MTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-T 175
Query: 220 LGYLAPDYAVSGHL-NPKSDIYSFGVLLLQIVTGQAAVHFDKELGE 264
Y AP+ + D+++ G +L +++ + D +L +
Sbjct: 176 RWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ 221
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 158 ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA 217
A I GL +H E IV+RD+KP NILLD + + +ISD GL+ PE T I RV
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV- 346
Query: 218 GTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
GT+GY+AP+ + D ++ G LL +++ GQ+ K+
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK 390
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 19/216 (8%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHGG 116
+G+G F V + + G VA+K++ + ++ EV M + H N+VKL
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
++ +Y + L+ + + K + + R+I + Y H++ I
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ----YCHQK---RI 135
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD-YAVSGHLNP 235
VHRD+K N+LLD + N KI+DFG S F + G Y AP+ + + P
Sbjct: 136 VHRDLKAENLLLDADMNIKIADFGFSNEFT--VGGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 236 KSDIYSFGVLLLQIVTGQAAVHFD----KELGEYYL 267
+ D++S GV+L +V+G ++ FD KEL E L
Sbjct: 194 EVDVWSLGVILYTLVSG--SLPFDGQNLKELRERVL 227
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 29/215 (13%)
Query: 60 VGEGGFGSVYKGKLQD-GTVVAVKVL---------SVESKQGEKEFMSEVASMANICHEN 109
+G+G FG V ++++ G + AVKVL VE EK +S + H
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN-----HPF 85
Query: 110 LVKLHGGCIEGPCRII-VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
L +L C + P R+ V +++ L + +K+R +F R A I L ++
Sbjct: 86 LTQLFC-CFQTPDRLFFVMEFVNGGDL---MFHIQKSR-RFDEARARFYAAEIISALMFL 140
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH--ISTRVAGTLGYLAPD 226
H++ I++RD+K N+LLD + K++DFG+ K E I + + GT Y+AP+
Sbjct: 141 HDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAPE 194
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
P D ++ GVLL +++ G A + E
Sbjct: 195 ILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE 229
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 158 ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA 217
A I GL +H E IV+RD+KP NILLD + + +ISD GL+ PE T I RV
Sbjct: 292 AAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV- 346
Query: 218 GTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
GT+GY+AP+ + D ++ G LL +++ GQ+ K+
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK 390
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V V VA+K +S E + + + E+ + HEN++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 89
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 146
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 106/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V +E S + KE + E MA++ + ++ +L
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 117 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 161
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 162 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 218
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 219 WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKN---RAKFSWTARREI--ALGIARGLAYIH 169
G E P II + LGE ++ KFS I A ++ LAY+
Sbjct: 78 GVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
+ VHRDI N+L+ K+ DFGLS+ + + +++ + ++AP+
Sbjct: 129 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 185
Query: 230 SGHLNPKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 186 FRRFTSASDVWMFGVCMWEIL 206
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 96/205 (46%), Gaps = 9/205 (4%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLV 111
+ + + +GEG +G V V VA+K +S E + + + E+ + HEN++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
+ I P + D L +T L + S I RGL YIH
Sbjct: 85 GI-NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAV 229
+++HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ +
Sbjct: 144 ---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 200
Query: 230 SGHLNPKS-DIYSFGVLLLQIVTGQ 253
+ KS DI+S G +L ++++ +
Sbjct: 201 NSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 101/205 (49%), Gaps = 13/205 (6%)
Query: 60 VGE-GGFGSVYKGKLQDGTVVAV-KVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GE G FG VYK + ++ +V+A KV+ +S++ +++M E+ +A+ H N+VKL
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I+ ++ ++ +L E+ + + + + L Y+H+ I+
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELER---PLTESQIQVVCKQTLDALNYLHDN---KII 130
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV--SGHLNP 235
HRD+K NIL + + K++DFG+S GT ++AP+ + + P
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRP 190
Query: 236 ---KSDIYSFGVLLLQIVTGQAAVH 257
K+D++S G+ L+++ + H
Sbjct: 191 YDYKADVWSLGITLIEMAEIEPPHH 215
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +YM + L + +FS R A I
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ K++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V V VA+K +S E + + + E+ + HEN++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 89
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 146
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 147 HRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +YM + L + +FS R A I
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ K++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V V VA+K +S E + + + E+ + HEN++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 89
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 146
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V V VA+K +S E + + + E+ + HEN++ +
Sbjct: 39 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 97
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 98 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 154
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 155 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 214
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 215 KSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V V VA+K +S E + + + E+ + HEN++ +
Sbjct: 31 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 89
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 90 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 146
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 147 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 206
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 207 KSIDIWSVGCILAEMLSNR 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 27/215 (12%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGEKE-FMSEVASMANICHENLVKLHGGC 117
+G GGFG V++ K + D A+K + + +++ +E M EV ++A + H +V+
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 118 IEG-------PCRIIVYDYMQNNSLSQTLLGEEKN-RAKFSWTARR---EIALGIARGLA 166
+E P VY Y+Q + L + N R R I L IA +
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPED------ITHIS-----TR 215
++H + ++HRD+KPSNI + K+ DFGL +D +T + T
Sbjct: 133 FLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 216 VAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIV 250
GT Y++P+ + K DI+S G++L +++
Sbjct: 190 QVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 59 KVGEGGFGSVYKGKLQDG-TVVAVKVLSVESKQG--EKEFMSEVASMANICHENLVKLHG 115
K+GEG +G+V+K K ++ +VA+K + ++ + E+ + + H+N+V+LH
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+V+++ + L + + + + +GL + H +
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+KP N+L+++N K++DFGL++ F + S V TL Y PD L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 236 KS-DIYSFGVLLLQIVTG 252
S D++S G + ++
Sbjct: 181 TSIDMWSAGCIFAELANA 198
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V V VA+K +S E + + + E+ + HEN++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 91
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 148
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 93
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 210
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V V VA+K +S E + + + E+ + HEN++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 109
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 110 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 166
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 167 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 226
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 227 KSIDIWSVGCILAEMLSNR 245
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 9/103 (8%)
Query: 156 EIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTR 215
++ + I + L Y+ E K ++HRD+KPSNILLD+ K+ DFG+S +D R
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--KAKDR 183
Query: 216 VAGTLGYLAPDY-----AVSGHLNPKSDIYSFGVLLLQIVTGQ 253
AG Y+AP+ + ++D++S G+ L+++ TGQ
Sbjct: 184 SAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G+G FG VYK K ++ G + A KV+ +S++ ++++ E+ +A H +VKL G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I+ ++ ++ +L E +R + + + + L ++H + I+
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIML--ELDRG-LTEPQIQVVCRQMLEALNFLHSK---RII 131
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAVSGHLNP 235
HRD+K N+L+ + +++DFG+S +++ + R + GT ++AP+ + +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 236 -----KSDIYSFGVLLLQIVTGQAAVH 257
K+DI+S G+ L+++ + H
Sbjct: 189 TPYDYKADIWSLGITLIEMAQIEPPHH 215
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 106/207 (51%), Gaps = 17/207 (8%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G+G FG VYK K ++ G + A KV+ +S++ ++++ E+ +A H +VKL G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I+ ++ ++ +L E +R + + + + L ++H + I+
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIML--ELDRG-LTEPQIQVVCRQMLEALNFLHSK---RII 139
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVA--GTLGYLAPDYAVSGHLNP 235
HRD+K N+L+ + +++DFG+S +++ + R + GT ++AP+ + +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSA---KNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 236 -----KSDIYSFGVLLLQIVTGQAAVH 257
K+DI+S G+ L+++ + H
Sbjct: 197 TPYDYKADIWSLGITLIEMAQIEPPHH 223
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V V VA+K +S E + + + E+ + HEN++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI-NDI 91
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 148
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 149 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 98/203 (48%), Gaps = 17/203 (8%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V V VA+K +S E + + + E+ + HEN++ +
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 109
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRA-KFSWTARREIAL---GIARGLAYIHEEIK 173
I P + M++ L L+G + + K + I I RGL YIH
Sbjct: 110 IRAP----TIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA-- 163
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSG 231
+++HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 164 -NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS 222
Query: 232 HLNPKS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 43/232 (18%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVL---------SVESKQGEKEF 95
++K F +G+G FG V+ + + A+K L VE EK
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 96 MSEVASMANICH--------ENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRA 147
+S + H ENL V +Y+ L + ++
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENL-------------FFVMEYLNGGDLMYHI----QSCH 113
Query: 148 KFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE 207
KF + A I GL ++H + IV+RD+K NILLD++ + KI+DFG+ K E
Sbjct: 114 KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---E 167
Query: 208 DI--THISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH 257
++ + GT Y+AP+ + N D +SFGVLL +++ GQ+ H
Sbjct: 168 NMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 49/220 (22%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFM--SEVASMANICHENLVKLHGGC 117
VG+G +G V++G Q G VAVK+ S + EK + +E+ + + HEN++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 118 IEG-----PCRII--------VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARG 164
+ +I +YDY+Q +L + I L IA G
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV--------------SCLRIVLSIASG 117
Query: 165 LAYIHEEI-----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST----R 215
LA++H EI KP+I HRD+K NIL+ +N I+D GL+ + + + R
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 216 VAGTLGYLAP---DYAVSGHL---NPKSDIYSFGVLLLQI 249
V GT Y+AP D + + DI++FG++L ++
Sbjct: 178 V-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 22/201 (10%)
Query: 60 VGEGGFGSVYKGKLQD----GTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLH 114
+GEG FG V++G VA+K + S ++F+ E +M H ++VKL
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKN---RAKFSWTARREI--ALGIARGLAYIH 169
G E P II + LGE ++ KFS I A ++ LAY+
Sbjct: 458 GVITENPVWII---------MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
+ VHRDI N+L+ K+ DFGLS+ + + +++ + ++AP+
Sbjct: 509 SK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN 565
Query: 230 SGHLNPKSDIYSFGVLLLQIV 250
SD++ FGV + +I+
Sbjct: 566 FRRFTSASDVWMFGVCMWEIL 586
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 77 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 121
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 122 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 178
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 179 WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 102/220 (46%), Gaps = 49/220 (22%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFM--SEVASMANICHENLVKLHGGC 117
VG+G +G V++G Q G VAVK+ S + EK + +E+ + + HEN++
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 118 IEG-----PCRII--------VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARG 164
+ +I +YDY+Q +L + I L IA G
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV--------------SCLRIVLSIASG 117
Query: 165 LAYIHEEI-----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST----R 215
LA++H EI KP+I HRD+K NIL+ +N I+D GL+ + + + R
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 216 VAGTLGYLAP---DYAVSGHL---NPKSDIYSFGVLLLQI 249
V GT Y+AP D + + DI++FG++L ++
Sbjct: 178 V-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 127
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 93 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 137
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 138 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 194
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 195 WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIAL--------GI 161
L G C + GP +IV ++ + +LS L + + + + L +
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TL 220
A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++ A L
Sbjct: 154 AKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++AP+ +SD++SFGVLL +I +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 59 KVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V++ + G A K + + ++ E+ +M+ + H LV LH
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ +++Y++M L + + E K S E + +GL ++HE + V
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHEN---NYV 171
Query: 178 HRDIKPSNILL--DQNFNPKISDFGLS-KLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
H D+KP NI+ ++ K+ DFGL+ L P+ ++T GT + AP+ A +
Sbjct: 172 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVG 228
Query: 235 PKSDIYSFGVLLLQIVTG 252
+D++S GVL +++G
Sbjct: 229 YYTDMWSVGVLSYILLSG 246
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIAL--------GI 161
L G C + GP +IV ++ + +LS L + + + + L +
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-TL 220
A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++ A L
Sbjct: 154 AKGMEFLASR---KXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++AP+ +SD++SFGVLL +I +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V V VA+K +S E + + + E+ + HEN++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI-NDI 91
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 148
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T T Y AP+ ++
Sbjct: 149 HRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT 208
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 209 KSIDIWSVGCILAEMLSNR 227
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 127
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 86 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 130
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 83 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 127
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 58 NKVGEGGFGSVYKGKL------QDGTVVAVKVLSVESKQG-EKEFMSEVASMANICHENL 110
++GE FG VYKG L + VA+K L +++ +EF E A + H N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI------------A 158
V L G + +++ Y + L + L+ + S R +
Sbjct: 92 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL-SKLFPEDITHISTRVA 217
IA G+ Y+ +VH+D+ N+L+ N KISD GL +++ D +
Sbjct: 152 AQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 218 GTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ ++AP+ + G + SDI+S+GV+L ++ +
Sbjct: 209 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 100/220 (45%), Gaps = 49/220 (22%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFM--SEVASMANICHENLVKLHGGC 117
VG+G +G V++G Q G VAVK+ S + EK + +E+ + + HEN++
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGFIASD 100
Query: 118 IEGPCRII-------------VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARG 164
+ +YDY+Q +L + I L IA G
Sbjct: 101 MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV--------------SCLRIVLSIASG 146
Query: 165 LAYIHEEI-----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST----R 215
LA++H EI KP+I HRD+K NIL+ +N I+D GL+ + + + R
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 206
Query: 216 VAGTLGYLAP---DYAVSGHL---NPKSDIYSFGVLLLQI 249
V GT Y+AP D + + DI++FG++L ++
Sbjct: 207 V-GTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 86 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 130
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + +AGT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 83 LGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLL---------NWCVQ------IA 127
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 86 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 130
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 86 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 130
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 131 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 187
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 188 WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 84 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 128
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 85 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 129
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 84 LGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLL---------NWCVQ------IA 128
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 129 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 185
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 186 WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 85 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 129
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 186
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 108 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 152
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 153 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 209
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 210 WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 87 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 131
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 188
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 96/214 (44%), Gaps = 23/214 (10%)
Query: 58 NKVGEGGFGSVYKGKL------QDGTVVAVKVLSVESKQG-EKEFMSEVASMANICHENL 110
++GE FG VYKG L + VA+K L +++ +EF E A + H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG---------- 160
V L G + +++ Y + L + L+ + S R +
Sbjct: 75 VCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 134
Query: 161 --IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL-SKLFPEDITHISTRVA 217
IA G+ Y+ +VH+D+ N+L+ N KISD GL +++ D +
Sbjct: 135 AQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 218 GTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ ++AP+ + G + SDI+S+GV+L ++ +
Sbjct: 192 LPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 89 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 133
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 134 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 190
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 191 WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 59 KVGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V++ + G A K + + ++ E+ +M+ + H LV LH
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ +++Y++M L + + E K S E + +GL ++HE + V
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHEN---NYV 277
Query: 178 HRDIKPSNILL--DQNFNPKISDFGLS-KLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
H D+KP NI+ ++ K+ DFGL+ L P+ ++T GT + AP+ A +
Sbjct: 278 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGKPVG 334
Query: 235 PKSDIYSFGVLLLQIVTG 252
+D++S GVL +++G
Sbjct: 335 YYTDMWSVGVLSYILLSG 352
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 105/210 (50%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 90 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 134
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 95/203 (46%), Gaps = 17/203 (8%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK----L 113
+GEG +G V ++ V K+ E + + + E+ + HEN++ L
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
+E + + + L + L ++ + + I RGL YIH
Sbjct: 111 RASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICY-----FLYQILRGLKYIHSA-- 163
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PE-DITHISTRVAGTLGYLAPDYAVSG 231
+++HRD+KPSN+L++ + KI DFGL+++ PE D T T T Y AP+ ++
Sbjct: 164 -NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNS 222
Query: 232 HLNPKS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 223 KGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 101/217 (46%), Gaps = 21/217 (9%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVL---SVESKQGEKEFMSEVASMANICHENLVKLHG 115
+G+G F V + + G VAVK++ + S +K F EV + H N+VKL
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF-REVRIXKVLNHPNIVKLFE 80
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+V +Y + L+ + + K + R+I + Y H++
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ----YCHQKF--- 133
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD-YAVSGHLN 234
IVHRD+K N+LLD + N KI+DFG S F + G Y AP+ + +
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFT--FGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFD----KELGEYYL 267
P+ D++S GV+L +V+G ++ FD KEL E L
Sbjct: 192 PEVDVWSLGVILYTLVSG--SLPFDGQNLKELRERVL 226
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLVKLHGGC 117
+G G F V + + +VA+K ++ E+ +G++ M +E+A + I H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
G ++ + L ++ + ++ + + + Y+H+ IV
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 178 HRDIKPSNIL---LDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
HRD+KP N+L LD++ ISDFGLSK+ ED + + GT GY+AP+ +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 235 PKSDIYSFGVLLLQIVTG 252
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLVKLHGGC 117
+G G F V + + +VA+K ++ E+ +G++ M +E+A + I H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
G ++ + L ++ + ++ + + + Y+H+ IV
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 178 HRDIKPSNIL---LDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
HRD+KP N+L LD++ ISDFGLSK+ ED + + GT GY+AP+ +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 235 PKSDIYSFGVLLLQIVTG 252
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ Q+ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 99/232 (42%), Gaps = 43/232 (18%)
Query: 46 ELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVL---------SVESKQGEKEF 95
++K F +G+G FG V+ + + A+K L VE EK
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 96 MSEVASMANICH--------ENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRA 147
+S + H ENL V +Y+ L + ++
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENL-------------FFVMEYLNGGDLMYHI----QSCH 114
Query: 148 KFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPE 207
KF + A I GL ++H + IV+RD+K NILLD++ + KI+DFG+ K E
Sbjct: 115 KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK---E 168
Query: 208 DI--THISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH 257
++ + GT Y+AP+ + N D +SFGVLL +++ GQ+ H
Sbjct: 169 NMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLVKLHGGC 117
+G G F V + + +VA+K ++ E+ +G++ M +E+A + I H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
G ++ + L ++ + ++ + + + Y+H+ IV
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 178 HRDIKPSNIL---LDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
HRD+KP N+L LD++ ISDFGLSK+ ED + + GT GY+AP+ +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 235 PKSDIYSFGVLLLQIVTG 252
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 93
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 150
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T Y AP+ ++
Sbjct: 151 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 210
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 211 KSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 9/199 (4%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+GEG +G V L V K+ E + + + E+ + HEN++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI-NDI 94
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
I P + D L +T L + S I RGL YIH +++
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVL 151
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAPDYAVSGHLNP 235
HRD+KPSN+LL+ + KI DFGL+++ D H T Y AP+ ++
Sbjct: 152 HRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYT 211
Query: 236 KS-DIYSFGVLLLQIVTGQ 253
KS DI+S G +L ++++ +
Sbjct: 212 KSIDIWSVGCILAEMLSNR 230
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 17/191 (8%)
Query: 79 VAVKVLSVESKQGE-KEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQ 137
VA+K +++E Q E + E+ +M+ H N+V + + +V + S+
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 138 TLL-----GEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNF 192
+ GE K+ + I + GL Y+H K +HRD+K NILL ++
Sbjct: 103 IIKHIVAKGEHKSGV-LDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDG 158
Query: 193 NPKISDFGLSKLFPE--DITHISTR--VAGTLGYLAPDY--AVSGHLNPKSDIYSFGVLL 246
+ +I+DFG+S DIT R GT ++AP+ V G+ + K+DI+SFG+
Sbjct: 159 SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITA 217
Query: 247 LQIVTGQAAVH 257
+++ TG A H
Sbjct: 218 IELATGAAPYH 228
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +FS R A I
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ K++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 104/210 (49%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 80 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 124
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 125 EGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 181
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 182 WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 15/190 (7%)
Query: 79 VAVKVLSVESKQGE-KEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNS--- 134
VA+K +++E Q E + E+ +M+ H N+V + + +V + S
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 135 -LSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFN 193
+ + E + I + GL Y+H K +HRD+K NILL ++ +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGS 154
Query: 194 PKISDFGLSKLFPE--DITHISTR--VAGTLGYLAPDY--AVSGHLNPKSDIYSFGVLLL 247
+I+DFG+S DIT R GT ++AP+ V G+ + K+DI+SFG+ +
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGY-DFKADIWSFGITAI 213
Query: 248 QIVTGQAAVH 257
++ TG A H
Sbjct: 214 ELATGAAPYH 223
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 27/277 (9%)
Query: 51 TNGFCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC---- 106
++ + ++G+G F SV + + T + + +K+ ++ A IC
Sbjct: 4 SDNYDVKEELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+V+LH E +V+D + L + ++ R +S I +A
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIA 118
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFN---PKISDFGLSKLFPEDITHISTRVAGTLGYL 223
Y H IVHR++KP N+LL K++DFGL+ + + AGT GYL
Sbjct: 119 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 173
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTG--------QAAVHFDKELGEYYLVEKAWEMH 275
+P+ + DI++ GV+L ++ G Q ++ + G Y W+
Sbjct: 174 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT- 232
Query: 276 NTDKLQHLVDPMLCGNFSGN-EAVRFLKVGLLCVQEK 311
T + + L+D ML N A + LKV +C +E+
Sbjct: 233 VTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER 269
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 27/277 (9%)
Query: 51 TNGFCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC---- 106
++ + ++G+G F SV + + T + + +K+ ++ A IC
Sbjct: 5 SDNYDVKEELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+V+LH E +V+D + L + ++ R +S I +A
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIA 119
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFN---PKISDFGLSKLFPEDITHISTRVAGTLGYL 223
Y H IVHR++KP N+LL K++DFGL+ + + AGT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTG--------QAAVHFDKELGEYYLVEKAWEMH 275
+P+ + DI++ GV+L ++ G Q ++ + G Y W+
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT- 233
Query: 276 NTDKLQHLVDPMLCGNFSGN-EAVRFLKVGLLCVQEK 311
T + + L+D ML N A + LKV +C +E+
Sbjct: 234 VTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRER 270
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 59 KVGEGGFGSVYKGKLQDG-TVVAVKVLSVESKQG--EKEFMSEVASMANICHENLVKLHG 115
K+GEG +G+V+K K ++ +VA+K + ++ + E+ + + H+N+V+LH
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+V+++ + L + + + + +GL + H +
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKYF---DSCNGDLDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+KP N+L+++N K+++FGL++ F + S V TL Y PD L
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 236 KS-DIYSFGVLLLQIVTG 252
S D++S G + ++
Sbjct: 181 TSIDMWSAGCIFAELANA 198
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI------------ 157
L G C + GP +IV ++ + +LS T L ++N A ++
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 158 -ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ +A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 209
Query: 217 AG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A L ++AP+ +SD++SFGVLL +I +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 34/210 (16%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGE--KEFMSEVASMANICHENLVKLHGGC 117
+G+G FG VY G+ VA++++ +E + K F EV + HEN+V G C
Sbjct: 41 IGKGRFGQVYHGRWHGE--VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ P I+ + +L + + R+IA I +G+ Y+H + I+
Sbjct: 99 MSPPHLAIITSLCKGRTLYSVV---RDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GIL 152
Query: 178 HRDIKPSNILLDQNFNPKISDFGLSKL-------FPEDITHISTRVAGTLGYLAPDYAVS 230
H+D+K N+ D N I+DFGL + ED I G L +LAP+ +
Sbjct: 153 HKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQN---GWLCHLAPE--II 206
Query: 231 GHLNPK-----------SDIYSFGVLLLQI 249
L+P SD+++ G + ++
Sbjct: 207 RQLSPDTEEDKLPFSKHSDVFALGTIWYEL 236
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 60 VGEGGFGSVYKGK----LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANICHENLV 111
+G+GG+G V++ + G + A+KVL V + + +E + + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
L G ++ +Y+ L L E+ TA +A I+ L ++H++
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLA-EISMALGHLHQK 140
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
I++RD+KP NI+L+ + K++DFGL K D T ++ GT+ Y+AP+ +
Sbjct: 141 ---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTIEYMAPEILMRS 196
Query: 232 HLNPKSDIYSFGVLLLQIVTG 252
N D +S G L+ ++TG
Sbjct: 197 GHNRAVDWWSLGALMYDMLTG 217
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI------------ 157
L G C + GP +IV ++ + +LS T L ++N A ++
Sbjct: 132 NLLGACTKPGGPLMVIV-EFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 189
Query: 158 -ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ +A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++
Sbjct: 190 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 246
Query: 217 AG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A L ++AP+ +SD++SFGVLL +I +
Sbjct: 247 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 39 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 96
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 97 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 153
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 154 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 209 AK----RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
Query: 262 LGEY 265
+ Y
Sbjct: 265 IQIY 268
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 60 VGEGGFGSVYKGK----LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANICHENLV 111
+G+GG+G V++ + G + A+KVL V + + +E + + H +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
L G ++ +Y+ L L E+ TA +A I+ L ++H++
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYLA-EISMALGHLHQK 140
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSG 231
I++RD+KP NI+L+ + K++DFGL K D T ++ GT+ Y+AP+ +
Sbjct: 141 ---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTIEYMAPEILMRS 196
Query: 232 HLNPKSDIYSFGVLLLQIVTG 252
N D +S G L+ ++TG
Sbjct: 197 GHNRAVDWWSLGALMYDMLTG 217
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEF---MSEVASMANICH 107
+ F +G G FG V K ++ G A+K+L + KE ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 108 ENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAY 167
LVKL + +V +Y + L + +FS R A I Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 168 IHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+H +++RD+KP N+++DQ K++DFGL+K + + + GT YLAP+
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 31/219 (14%)
Query: 52 NGFCSSNK-------VGEGGFGSVYKGK-LQD-GTVVAVKVLSVESKQGEK----EFMSE 98
+G C +++ +GEG +G V+K + L++ G VA+K + V++ GE+ + E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIRE 61
Query: 99 VASMANI---CHENLVKLHGGCIEGPCR-----IIVYDYMQNNSLSQTLLGEEKNRAKFS 150
VA + ++ H N+V+L C +V++++ + T ++
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD---LTTYLDKVPEPGVP 118
Query: 151 WTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT 210
+++ + RGL ++H +VHRD+KP NIL+ + K++DFGL++++
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQ 173
Query: 211 HISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQI 249
T V TL Y AP+ + D++S G + ++
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI------------ 157
L G C + GP +IV ++ + +LS T L ++N A ++
Sbjct: 86 NLLGACTKPGGPLMVIV-EFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 158 -ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ +A+G+ ++ +HRD+ NILL + KI DFGL++ +D +
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 217 AG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A L ++AP+ +SD++SFGVLL +I +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 29/216 (13%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI------------ 157
L G C + GP +IV ++ + +LS T L ++N A ++
Sbjct: 97 NLLGACTKPGGPLMVIV-EFCKFGNLS-TYLRSKRNEFVPYKEAPEDLYKDFLTLEHLIC 154
Query: 158 -ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ +A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++
Sbjct: 155 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 211
Query: 217 AG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A L ++AP+ +SD++SFGVLL +I +
Sbjct: 212 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 31/219 (14%)
Query: 52 NGFCSSNK-------VGEGGFGSVYKGK-LQD-GTVVAVKVLSVESKQGEK----EFMSE 98
+G C +++ +GEG +G V+K + L++ G VA+K + V++ GE+ + E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIRE 61
Query: 99 VASMANI---CHENLVKLHGGCIEGPCR-----IIVYDYMQNNSLSQTLLGEEKNRAKFS 150
VA + ++ H N+V+L C +V++++ + T ++
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD---LTTYLDKVPEPGVP 118
Query: 151 WTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT 210
+++ + RGL ++H +VHRD+KP NIL+ + K++DFGL++++
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQ 173
Query: 211 HISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQI 249
T V TL Y AP+ + D++S G + ++
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 27/276 (9%)
Query: 51 TNGFCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC---- 106
++ + ++G+G F SV + + T + + +K+ ++ A IC
Sbjct: 5 SDNYDVKEELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N+V+LH E +V+D + L + ++ R +S I +A
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA----REFYSEADASHCIQQILESIA 119
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFN---PKISDFGLSKLFPEDITHISTRVAGTLGYL 223
Y H IVHR++KP N+LL K++DFGL+ + + AGT GYL
Sbjct: 120 YCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYL 174
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTG--------QAAVHFDKELGEYYLVEKAWEMH 275
+P+ + DI++ GV+L ++ G Q ++ + G Y W+
Sbjct: 175 SPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT- 233
Query: 276 NTDKLQHLVDPMLCGNFSGN-EAVRFLKVGLLCVQE 310
T + + L+D ML N A + LKV +C +E
Sbjct: 234 VTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE 269
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI------------ 157
L G C + GP +IV ++ + +LS T L ++N A ++
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 158 -ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ +A+G+ ++ +HRD+ NILL + KI DFGL++ +D +
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 209
Query: 217 AG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A L ++AP+ +SD++SFGVLL +I +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-----EKEFMSEVASMANICHENLVKL 113
++G G FG+V KG Q VV + + + + E ++E M + + +V++
Sbjct: 12 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 71
Query: 114 HGGCIEGPCRIIVYDYMQ----NNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
G C E ++V + + N L Q ++KN E+ ++ G+ Y+
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--------ELVHQVSMGMKYLE 122
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDY 227
E + VHRD+ N+LL KISDFGLSK D + + G + + AP+
Sbjct: 123 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 179
Query: 228 AVSGHLNPKSDIYSFGVLLLQ 248
+ KSD++SFGVL+ +
Sbjct: 180 INYYKFSSKSDVWSFGVLMWE 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-----EKEFMSEVASMANICHENLVKL 113
++G G FG+V KG Q VV + + + + E ++E M + + +V++
Sbjct: 14 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 73
Query: 114 HGGCIEGPCRIIVYDYMQ----NNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
G C E ++V + + N L Q ++KN E+ ++ G+ Y+
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--------ELVHQVSMGMKYLE 124
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDY 227
E + VHRD+ N+LL KISDFGLSK D + + G + + AP+
Sbjct: 125 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 181
Query: 228 AVSGHLNPKSDIYSFGVLLLQ 248
+ KSD++SFGVL+ +
Sbjct: 182 INYYKFSSKSDVWSFGVLMWE 202
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 12/217 (5%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVK--VLSVESKQGEKEFMSEVASMANICHENLVKLHG 115
K+GEG +G V+K + +D G +VA+K + S + +K + E+ + + H NLV L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+V++Y + L + ++ + + I + + + H K +
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHEL----DRYQRGVPEHLVKSITWQTLQAVNFCH---KHN 122
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV-SGHLN 234
+HRD+KP NIL+ ++ K+ DFG ++L + VA T Y +P+ V
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVA-TRWYRSPELLVGDTQYG 181
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEKA 271
P D+++ G + ++++G ++ + YL+ K
Sbjct: 182 PPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKT 218
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-----EKEFMSEVASMANICHENLVKL 113
++G G FG+V KG Q VV + + + + E ++E M + + +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 114 HGGCIEGPCRIIVYDYMQ----NNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
G C E ++V + + N L Q ++KN E+ ++ G+ Y+
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--------ELVHQVSMGMKYLE 128
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDY 227
E + VHRD+ N+LL KISDFGLSK D + + G + + AP+
Sbjct: 129 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 185
Query: 228 AVSGHLNPKSDIYSFGVLLLQ 248
+ KSD++SFGVL+ +
Sbjct: 186 INYYKFSSKSDVWSFGVLMWE 206
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 90/206 (43%), Gaps = 14/206 (6%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
+G G F V+ K + G + A+K + + +E+A + I HEN+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 119 EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVH 178
+V + L +L R ++ + + + Y+HE IVH
Sbjct: 77 STTHYYLVMQLVSGGELFDRIL----ERGVYTEKDASLVIQQVLSAVKYLHEN---GIVH 129
Query: 179 RDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
RD+KP N+L ++N I+DFGLSK+ + I + GT GY+AP+ +
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVLAQKPYSK 186
Query: 236 KSDIYSFGVLLLQIVTGQAAVHFDKE 261
D +S GV+ ++ G + + E
Sbjct: 187 AVDCWSIGVITYILLCGYPPFYEETE 212
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 106/219 (48%), Gaps = 31/219 (14%)
Query: 52 NGFCSSNK-------VGEGGFGSVYKGK-LQD-GTVVAVKVLSVESKQGEK----EFMSE 98
+G C +++ +GEG +G V+K + L++ G VA+K + V++ GE+ + E
Sbjct: 4 DGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQT--GEEGMPLSTIRE 61
Query: 99 VASMANI---CHENLVKLHGGCIEGPCR-----IIVYDYMQNNSLSQTLLGEEKNRAKFS 150
VA + ++ H N+V+L C +V++++ + T ++
Sbjct: 62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD---LTTYLDKVPEPGVP 118
Query: 151 WTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT 210
+++ + RGL ++H +VHRD+KP NIL+ + K++DFGL++++
Sbjct: 119 TETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQ 173
Query: 211 HISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQI 249
T V TL Y AP+ + D++S G + ++
Sbjct: 174 MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-----EKEFMSEVASMANICHENLVKL 113
++G G FG+V KG Q VV + + + + E ++E M + + +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 114 HGGCIEGPCRIIVYDYMQ----NNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
G C E ++V + + N L Q ++KN E+ ++ G+ Y+
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--------ELVHQVSMGMKYLE 144
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDY 227
E + VHRD+ N+LL KISDFGLSK D + + G + + AP+
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 228 AVSGHLNPKSDIYSFGVLLLQ 248
+ KSD++SFGVL+ +
Sbjct: 202 INYYKFSSKSDVWSFGVLMWE 222
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-----EKEFMSEVASMANICHENLVKL 113
++G G FG+V KG Q VV + + + + E ++E M + + +V++
Sbjct: 34 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 93
Query: 114 HGGCIEGPCRIIVYDYMQ----NNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
G C E ++V + + N L Q ++KN E+ ++ G+ Y+
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--------ELVHQVSMGMKYLE 144
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDY 227
E + VHRD+ N+LL KISDFGLSK D + + G + + AP+
Sbjct: 145 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 201
Query: 228 AVSGHLNPKSDIYSFGVLLLQ 248
+ KSD++SFGVL+ +
Sbjct: 202 INYYKFSSKSDVWSFGVLMWE 222
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 19 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 76
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 77 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 133
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 134 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 189 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 262 LGEY 265
+ Y
Sbjct: 245 IQIY 248
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-----EKEFMSEVASMANICHENLVKL 113
++G G FG+V KG Q VV + + + + E ++E M + + +V++
Sbjct: 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 83
Query: 114 HGGCIEGPCRIIVYDYMQ----NNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
G C E ++V + + N L Q ++KN E+ ++ G+ Y+
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--------ELVHQVSMGMKYLE 134
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDY 227
E + VHRD+ N+LL KISDFGLSK D + + G + + AP+
Sbjct: 135 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 191
Query: 228 AVSGHLNPKSDIYSFGVLLLQ 248
+ KSD++SFGVL+ +
Sbjct: 192 INYYKFSSKSDVWSFGVLMWE 212
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 85
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +FS R A I
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFE 141
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 142 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPE 194
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 195 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 233
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 106/212 (50%), Gaps = 16/212 (7%)
Query: 48 KSATNGFCSSNK---VGEGGFGSVYK-GKLQDGTVVAVKVLSVESKQGEKEFMSEVASMA 103
+ A N F + +K +G G FG V+K + G +A K++ + ++E +E++ M
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
+ H NL++L+ ++V +Y+ L ++ E N + I
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL---FMKQICE 198
Query: 164 GLAYIHEEIKPSIVHRDIKPSNIL-LDQNFNP-KISDFGLSKLF-PEDITHISTRVAGTL 220
G+ ++H+ I+H D+KP NIL ++++ KI DFGL++ + P + ++ GT
Sbjct: 199 GIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF---GTP 252
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+LAP+ ++ +D++S GV+ +++G
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-----EKEFMSEVASMANICHENLVKL 113
++G G FG+V KG Q VV + + + + E ++E M + + +V++
Sbjct: 32 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 91
Query: 114 HGGCIEGPCRIIVYDYMQ----NNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
G C E ++V + + N L Q ++KN E+ ++ G+ Y+
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--------ELVHQVSMGMKYLE 142
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDY 227
E + VHRD+ N+LL KISDFGLSK D + + G + + AP+
Sbjct: 143 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 199
Query: 228 AVSGHLNPKSDIYSFGVLLLQ 248
+ KSD++SFGVL+ +
Sbjct: 200 INYYKFSSKSDVWSFGVLMWE 220
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+ G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 127
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 14/198 (7%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFM-SEVASMANICHENLVKLHGGC 117
+G G F V + + +VA+K ++ ++ +G++ M +E+A + I H N+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
G ++ + L ++ + ++ + + + Y+H+ IV
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIV----EKGFYTERDASRLIFQVLDAVKYLHD---LGIV 138
Query: 178 HRDIKPSNIL---LDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
HRD+KP N+L LD++ ISDFGLSK+ ED + + GT GY+AP+ +
Sbjct: 139 HRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQKPYS 196
Query: 235 PKSDIYSFGVLLLQIVTG 252
D +S GV+ ++ G
Sbjct: 197 KAVDCWSIGVIAYILLCG 214
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 85 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 129
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFG +KL E+ + + +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI------------ 157
L G C + GP +IV ++ + +LS T L ++N A ++
Sbjct: 95 NLLGACTKPGGPLMVIV-EFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152
Query: 158 -ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ +A+G+ ++ +HRD+ NILL + KI DFGL++ +D +
Sbjct: 153 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD 209
Query: 217 AG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A L ++AP+ +SD++SFGVLL +I +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+ G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 90 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 134
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+++DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 85 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 129
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFG +KL E+ + + +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI------------ 157
L G C + GP +I ++ + +LS T L ++N A ++
Sbjct: 86 NLLGACTKPGGPLMVIT-EFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 158 -ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ +A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 217 AG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A L ++AP+ +SD++SFGVLL +I +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+ G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 90 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 134
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFGL+KL E+ + + +
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 191
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 87 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 131
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFG +KL E+ + + +
Sbjct: 132 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 188
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 189 WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 83 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 127
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFG +KL E+ + + +
Sbjct: 128 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 184
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 90 LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 134
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFG +KL E+ + + +
Sbjct: 135 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 191
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 192 WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 104/210 (49%), Gaps = 36/210 (17%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVE-----SKQGEKEFMSEVASMANICHENLVKL 113
+G G FG+VYKG + +G V + V E S + KE + E MA++ + ++ +L
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 114 HGGCIEGPCRII--------VYDYMQ---NNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
G C+ ++I + DY++ +N SQ LL +W + IA
Sbjct: 85 LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLL---------NWCVQ------IA 129
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF-PEDITHISTRVAGTLG 221
+G+ Y+ + +VHRD+ N+L+ + KI+DFG +KL E+ + + +
Sbjct: 130 KGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIK 186
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
++A + + +SD++S+GV + +++T
Sbjct: 187 WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFS--------WTARREI--AL 159
L G C + GP +IV ++ + +LS L + + T I +
Sbjct: 97 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 160 GIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG- 218
+A+G+ ++ +HRD+ NILL + KI DFGL++ +D + A
Sbjct: 156 QVAKGMEFLASR---KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 219 TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
L ++AP+ +SD++SFGVLL +I +
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI------------ 157
L G C + GP +I ++ + +LS T L ++N A ++
Sbjct: 86 NLLGACTKPGGPLMVIT-EFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 158 -ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ +A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 200
Query: 217 AG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A L ++AP+ +SD++SFGVLL +I +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK + + N + + F +G G FG V K ++ G A+K+L
Sbjct: 11 FLAKAKEDFLKKWESPAQN--TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 68
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 69 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-- 125
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 126 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 180
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 181 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
Query: 262 LGEY 265
+ Y
Sbjct: 237 IQIY 240
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 5 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 62
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 63 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 119
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+D+ +++DFG
Sbjct: 120 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGF 174
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 175 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
Query: 262 LGEY 265
+ Y
Sbjct: 231 IQIY 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +FS R A I
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 100
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +FS R A I
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPE 209
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 26/214 (12%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFS---------WTARREI--A 158
L G C + GP +IV ++ + +LS L + + T I +
Sbjct: 96 NLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG 218
+A+G+ ++ +HRD+ NILL + KI DFGL++ +D + A
Sbjct: 155 FQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 219 -TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
L ++AP+ +SD++SFGVLL +I +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +FS R A I
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +FS R A I
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +F+ R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFAEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 43/217 (19%)
Query: 60 VGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHENLVKLHGGCI 118
VG+G +G V++G L G VAVK+ S +Q +E +E+ + + H+N++
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRE--TEIYNTVLLRHDNILGF----- 67
Query: 119 EGPCRIIVYDYMQNNSLSQTLL--GEEKNRAKFSWTARR--------EIALGIARGLAYI 168
I D NS +Q L ++ + + + R+ +A+ A GLA++
Sbjct: 68 ------IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHL 121
Query: 169 HEEI-----KPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHI----STRVAGT 219
H EI KP+I HRD K N+L+ N I+D GL+ + + ++ + RV GT
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GT 180
Query: 220 LGYLAPDYAVSGHLNPK-------SDIYSFGVLLLQI 249
Y+AP+ + + +DI++FG++L +I
Sbjct: 181 KRYMAPE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +FS R A I
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 96/218 (44%), Gaps = 15/218 (6%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEF---MSEVASMANICH 107
+ F +G G FG V K ++ G A+K+L + KE ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 108 ENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAY 167
LVKL + +V +Y + L + +FS R A I Y
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEY 156
Query: 168 IHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+H +++RD+KP N+++DQ +++DFGL+K + + + GT YLAP+
Sbjct: 157 LHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLAPEI 209
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 210 ILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 59 KVGEGGFGSVYKGK-LQDGTVVAVKVL--SVESKQGEKEFMSEVASMANICHENLVKLHG 115
++G G +G V K + + G ++AVK + +V S++ ++ M SM + V +G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 116 GCI-EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
EG I + + + SL + +IA+ I + L ++H ++
Sbjct: 74 ALFREGDVWICME--LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL-- 129
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
S++HRD+KPSN+L++ K+ DFG+S +D+ AG Y+AP+ ++ LN
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--AGCKPYMAPE-RINPELN 186
Query: 235 P-----KSDIYSFGVLLLQI 249
KSDI+S G+ ++++
Sbjct: 187 QKGYSVKSDIWSLGITMIEL 206
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V K ++ G A+K+L V+ KQ E ++E + + LVKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V +Y + L + +FS R A I Y+H
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS---L 160
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
+++RD+KP N+++DQ K++DFG +K + + + GT YLAP+ +S N
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
D ++ GVL+ ++ G D+ + Y
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQG-----EKEFMSEVASMANICHENLVKL 113
++G G FG+V KG Q VV + + + + E ++E M + + +V++
Sbjct: 18 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 77
Query: 114 HGGCIEGPCRIIVYDYMQ----NNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
G C E ++V + + N L Q ++KN E+ ++ G+ Y+
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--------ELVHQVSMGMKYLE 128
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGT--LGYLAPDY 227
E + VHRD+ N+LL KISDFGLSK D + G + + AP+
Sbjct: 129 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPEC 185
Query: 228 AVSGHLNPKSDIYSFGVLLLQ 248
+ KSD++SFGVL+ +
Sbjct: 186 INYYKFSSKSDVWSFGVLMWE 206
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK + + N + + F +G G FG V K ++ G A+K+L
Sbjct: 19 FLAKAKEDFLKKWESPAQN--TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 76
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 77 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-- 133
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 134 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 189 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 262 LGEY 265
+ Y
Sbjct: 245 IQIY 248
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 100
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +FS R A I
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFE 156
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAPE 209
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK + + N + + F +G G FG V K ++ G A+K+L
Sbjct: 19 FLAKAKEDFLKKWESPAQN--TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 76
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 77 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-- 133
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 134 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 189 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 262 LGEY 265
+ Y
Sbjct: 245 IQIY 248
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK + + N + + F +G G FG V K ++ G A+K+L
Sbjct: 19 FLAKAKEDFLKKWESPAQN--TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 76
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 77 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-- 133
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 134 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 188
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 189 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 262 LGEY 265
+ Y
Sbjct: 245 IQIY 248
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 29/216 (13%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGE-KEFMSEVASMANICHE-NLV 111
+G G FG V + K VAVK+L + E + MSE+ + +I H N+V
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 112 KLHGGCIE--GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREI------------ 157
L G C + GP +I ++ + +LS T L ++N A ++
Sbjct: 86 NLLGACTKPGGPLMVIT-EFCKFGNLS-TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 143
Query: 158 -ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ +A+G+ ++ +HRD+ NILL + KI DFGL++ +D +
Sbjct: 144 YSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD 200
Query: 217 AG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A L ++AP+ +SD++SFGVLL +I +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK + + N + + F +G G FG V K ++ G A+K+L
Sbjct: 39 FLAKAKEDFLKKWESPAQN--TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 96
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 97 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-- 153
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 154 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 209 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
Query: 262 LGEY 265
+ Y
Sbjct: 265 IQIY 268
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK + + N + + F +G G FG V K ++ G A+K+L
Sbjct: 19 FLAKAKEDFLKKWESPAQN--TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 76
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y + L
Sbjct: 77 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL-- 133
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+++DQ K++DFG
Sbjct: 134 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGF 188
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 189 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 262 LGEY 265
+ Y
Sbjct: 245 IQIY 248
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 60 VGEGGFGSVYKGKLQDGT-VVAVKVL--SVESKQGEKEFMS-EVASMANICHENLVKLHG 115
+G+GGF ++ D V A K++ S+ K ++E MS E++ ++ H+++V HG
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V + + SL L K R + R I G Y+H
Sbjct: 85 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---R 137
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+K N+ L+++ KI DFGL+ D T + GT Y+AP+ +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 196
Query: 236 KSDIYSFGVLLLQIVTGQAA 255
+ D++S G ++ ++ G+
Sbjct: 197 EVDVWSIGCIMYTLLVGKPP 216
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 60 VGEGGFGSVYKGKLQDGT-VVAVKVL--SVESKQGEKEFMS-EVASMANICHENLVKLHG 115
+G+GGF ++ D V A K++ S+ K ++E MS E++ ++ H+++V HG
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V + + SL L K R + R I G Y+H
Sbjct: 85 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---R 137
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+K N+ L+++ KI DFGL+ D T + GT Y+AP+ +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 196
Query: 236 KSDIYSFGVLLLQIVTGQAA 255
+ D++S G ++ ++ G+
Sbjct: 197 EVDVWSIGCIMYTLLVGKPP 216
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 13 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 70
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 71 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 127
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +F R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 128 --RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 182
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 183 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
Query: 262 LGEY 265
+ Y
Sbjct: 239 IQIY 242
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 36/223 (16%)
Query: 76 GTVVAVKVLSVESKQGEKEFMSEVASMAN---------ICHENLVKLHGGCIEGPCRIIV 126
G AVK++ V +++ E + EV H +++ L +V
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 127 YDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNI 186
+D M+ L L + S R I + ++++H +IVHRD+KP NI
Sbjct: 179 FDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENI 231
Query: 187 LLDQNFNPKISDFGLS-KLFPEDITHISTRVAGTLGYLAP-------DYAVSGHLNPKSD 238
LLD N ++SDFG S L P + + GT GYLAP D G+ + D
Sbjct: 232 LLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGY-GKEVD 287
Query: 239 IYSFGVLLLQIVTGQAAVHFDKEL--------GEYYLVEKAWE 273
+++ GV+L ++ G +++ G+Y W+
Sbjct: 288 LWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWD 330
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK + + N + + F +G G FG V K ++ G A+K+L
Sbjct: 19 FLAKAKEDFLKKWESPAQN--TAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILD 76
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + LVKL + +V +Y + L
Sbjct: 77 KQKVVKLKQIEHT-LNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL-- 133
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ K++DFG
Sbjct: 134 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGF 188
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 189 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
Query: 262 LGEY 265
+ Y
Sbjct: 245 IQIY 248
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 106/211 (50%), Gaps = 30/211 (14%)
Query: 60 VGEGGFGSVYKGKLQD--------GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+G+G F ++KG ++ T V +KVL + + F + M+ + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
+G C+ G I+V ++++ SL T L + KN W + E+A +A + ++ E
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLD-TYLKKNKNCINILW--KLEVAKQLAAAMHFLEEN 132
Query: 172 IKPSIVHRDIKPSNILL-----DQNFNP---KISDFGLS-KLFPEDITHISTRVAGTLGY 222
+++H ++ NILL + NP K+SD G+S + P+DI + R+ +
Sbjct: 133 ---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI--LQERIP----W 183
Query: 223 LAPDYAVS-GHLNPKSDIYSFGVLLLQIVTG 252
+ P+ + +LN +D +SFG L +I +G
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +F R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +F R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 12/200 (6%)
Query: 60 VGEGGFGSVYKGKLQDGT-VVAVKVL--SVESKQGEKEFMS-EVASMANICHENLVKLHG 115
+G+GGF ++ D V A K++ S+ K ++E MS E++ ++ H+++V HG
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V + + SL L K R + R I G Y+H
Sbjct: 89 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---R 141
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+K N+ L+++ KI DFGL+ D T + GT Y+AP+ +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPEVLSKKGHSF 200
Query: 236 KSDIYSFGVLLLQIVTGQAA 255
+ D++S G ++ ++ G+
Sbjct: 201 EVDVWSIGCIMYTLLVGKPP 220
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +F R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 59 KVGEGGFGSVYKGKLQ---DGTVVAVKVLSVESKQG--EKEFMSEVASMANICHENLVKL 113
++G G FG+V KG Q VAVK+L E+ + E ++E M + + +V++
Sbjct: 376 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 435
Query: 114 HGGCIEGPCRIIVYDYMQ----NNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
G C E ++V + + N L Q ++KN E+ ++ G+ Y+
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--------ELVHQVSMGMKYLE 486
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDY 227
E + VHRD+ N+LL KISDFGLSK D + + G + + AP+
Sbjct: 487 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 543
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVT 251
+ KSD++SFGVL+ + +
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 39 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 96
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 97 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 153
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +F R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 154 --RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 209 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
Query: 262 LGEY 265
+ Y
Sbjct: 265 IQIY 268
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
+ +G GG G V+ D VA+K + + Q K + E+ + + H+N+VK
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVK 72
Query: 113 LH--------------GGCIEGPCRIIVYDYMQN---NSLSQTLLGEEKNRAKFSWTARR 155
+ G E IV +YM+ N L Q L EE R F +
Sbjct: 73 VFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARL-FMYQ--- 128
Query: 156 EIALGIARGLAYIHEEIKPSIVHRDIKPSNILLD-QNFNPKISDFGLSKLFPEDITHIST 214
+ RGL YIH +++HRD+KP+N+ ++ ++ KI DFGL+++ +H
Sbjct: 129 -----LLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGH 180
Query: 215 RVAG--TLGYLAPDYAVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKELGEYYLV-EK 270
G T Y +P +S + K+ D+++ G + +++TG+ EL + L+ E
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILES 240
Query: 271 AWEMHNTDK 279
+H D+
Sbjct: 241 IPVVHEEDR 249
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +FS R A I
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 80 AVKVLSV---------ESKQGEKEFMSEVASMANIC-HENLVKLHGGCIEGPCRIIVYDY 129
AVK++ V E ++ + + EV + + H N+++L +V+D
Sbjct: 33 AVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL 92
Query: 130 MQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLD 189
M+ L L + S R+I + + +H K +IVHRD+KP NILLD
Sbjct: 93 MKKGELFDYL----TEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLD 145
Query: 190 QNFNPKISDFGLS-KLFPEDITHISTRVAGTLGYLAPDYAVSGHLN-------PKSDIYS 241
+ N K++DFG S +L P + V GT YLAP+ + +N + D++S
Sbjct: 146 DDMNIKLTDFGFSCQLDPGEKLR---EVCGTPSYLAPE-IIECSMNDNHPGYGKEVDMWS 201
Query: 242 FGVLLLQIVTGQAAVHFDKEL--------GEYYLVEKAWEMHNTDKLQHLVDPML 288
GV++ ++ G K++ G Y W+ + +D ++ LV L
Sbjct: 202 TGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDY-SDTVKDLVSRFL 255
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 59 KVGEGGFGSVYKGKLQ---DGTVVAVKVLSVESKQG--EKEFMSEVASMANICHENLVKL 113
++G G FG+V KG Q VAVK+L E+ + E ++E M + + +V++
Sbjct: 377 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRM 436
Query: 114 HGGCIEGPCRIIVYDYMQ----NNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIH 169
G C E ++V + + N L Q ++KN E+ ++ G+ Y+
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--------ELVHQVSMGMKYLE 487
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG--TLGYLAPDY 227
E + VHRD+ N+LL KISDFGLSK D + + G + + AP+
Sbjct: 488 ES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPEC 544
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVT 251
+ KSD++SFGVL+ + +
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYK-GKLQDGTVVAVKVL--SVESKQGEKEFMS-EVASMANICHENLVKLHG 115
+G+GGF Y+ + V A KV+ S+ K +KE MS E+A ++ + ++V HG
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V + + SL L K R + R +G+ Y+H
Sbjct: 110 FFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---R 162
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+K N+ L+ + + KI DFGL+ D T + GT Y+AP+ +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAPEVLCKKGHSF 221
Query: 236 KSDIYSFGVLLLQIVTGQ 253
+ DI+S G +L ++ G+
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 43/270 (15%)
Query: 50 ATNGFCSSNKVGE---GGFGSVYKGKLQDGTV--VAVKVLSV---------ESKQGEKEF 95
+T+GF + + E G SV + + T AVK++ V E ++ +
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 96 MSEVASMANIC-HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTAR 154
+ EV + + H N+++L +V+D M+ L L + S
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKET 126
Query: 155 REIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLS-KLFPEDITHIS 213
R+I + + +H K +IVHRD+KP NILLD + N K++DFG S +L P +
Sbjct: 127 RKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR-- 181
Query: 214 TRVAGTLGYLAPDYAVSGHLN-------PKSDIYSFGVLLLQIVTGQAAVHFDKEL---- 262
V GT YLAP+ + +N + D++S GV++ ++ G K++
Sbjct: 182 -EVCGTPSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 263 ----GEYYLVEKAWEMHNTDKLQHLVDPML 288
G Y W+ + +D ++ LV L
Sbjct: 240 MIMSGNYQFGSPEWDDY-SDTVKDLVSRFL 268
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +FS R A I
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 100/200 (50%), Gaps = 16/200 (8%)
Query: 59 KVGEGGFGSVYKGK-LQDGTVVAVKVL--SVESKQGEKEFMSEVASMANICHENLVKLHG 115
++G G +G V K + + G ++AVK + +V S++ ++ M SM + V +G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 116 GCI-EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
EG I + + + SL + +IA+ I + L ++H ++
Sbjct: 118 ALFREGDVWICME--LMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL-- 173
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
S++HRD+KPSN+L++ K+ DFG+S + + T AG Y+AP+ ++ LN
Sbjct: 174 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVA--KTIDAGCKPYMAPE-RINPELN 230
Query: 235 P-----KSDIYSFGVLLLQI 249
KSDI+S G+ ++++
Sbjct: 231 QKGYSVKSDIWSLGITMIEL 250
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 60 VGEGGFGSVYKGKLQD-GTVVAVKVLS----VESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V K ++ G A+K+L V+ KQ E ++E + + LVKL
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V +Y+ + L + +FS R A I Y+H
Sbjct: 108 YSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS---L 160
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
+++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+ +S N
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
D ++ GVL+ ++ G D+ + Y
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 16/199 (8%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQG-EKEFMSEVASMANICHENLVKLHGGC 117
+G G F V + + G + AVK + ++ +G E +E+A + I HEN+V L
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED-I 88
Query: 118 IEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
E P + +V + L ++ + K + T R++ + Y+H + I
Sbjct: 89 YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVY----YLH---RMGI 141
Query: 177 VHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
VHRD+KP N+L D+ ISDFGLSK+ E + + GT GY+AP+
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGDVMSTACGTPGYVAPEVLAQKPY 199
Query: 234 NPKSDIYSFGVLLLQIVTG 252
+ D +S GV+ ++ G
Sbjct: 200 SKAVDCWSIGVIAYILLCG 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 43/270 (15%)
Query: 50 ATNGFCSSNKVGE---GGFGSVYKGKLQDGTV--VAVKVLSV---------ESKQGEKEF 95
+T+GF + + E G SV + + T AVK++ V E ++ +
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 96 MSEVASMANIC-HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTAR 154
+ EV + + H N+++L +V+D M+ L L + S
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKET 126
Query: 155 REIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLS-KLFPEDITHIS 213
R+I + + +H K +IVHRD+KP NILLD + N K++DFG S +L P +
Sbjct: 127 RKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLR-- 181
Query: 214 TRVAGTLGYLAPDYAVSGHLN-------PKSDIYSFGVLLLQIVTGQAAVHFDKEL---- 262
V GT YLAP+ + +N + D++S GV++ ++ G K++
Sbjct: 182 -SVCGTPSYLAPE-IIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 263 ----GEYYLVEKAWEMHNTDKLQHLVDPML 288
G Y W+ + +D ++ LV L
Sbjct: 240 MIMSGNYQFGSPEWDDY-SDTVKDLVSRFL 268
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V K ++ G A+K+L V+ KQ E ++E + + LVKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V +Y + L + +FS R A I Y+H
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS---L 160
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
+++RD+KP N+++DQ +++DFG +K + + + GT YLAP+ +S N
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
D ++ GVL+ ++ G D+ + Y
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 100
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +F R A I
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFE 156
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 157 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPE 209
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +F R A I
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK + + N + + F +G G FG V K ++ G A+K+L
Sbjct: 11 FLAKAKEDFLKKWESPAQN--TAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILD 68
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 69 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL-- 125
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +F R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 126 --RRIGRFXEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 180
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT YLAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 181 AK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
Query: 262 LGEY 265
+ Y
Sbjct: 237 IQIY 240
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V K ++ G A+K+L V+ KQ E ++E + + L KL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLTKLE 108
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V +Y + L + +FS R A I Y+H
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS---L 161
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
+++RD+KP N+++DQ K++DFG +K + + + GT YLAP+ +S N
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
D ++ GVL+ ++ G D+ + Y
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 17/219 (7%)
Query: 52 NGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANIC 106
+ F +G G FG V K ++ G A+K+L V+ KQ E ++E + +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVN 99
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
LVKL + +V +Y+ + L + +F R A I
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFE 155
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
Y+H +++RD+KP N+L+DQ +++DFG +K + + + GT YLAP+
Sbjct: 156 YLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPE 208
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
+S N D ++ GVL+ ++ G D+ + Y
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V K ++ G A+K+L V+ KQ E ++E + + L KL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLTKLE 108
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V +Y + L + +FS R A I Y+H
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFSEPHARFYAAQIVLTFEYLHS---L 161
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
+++RD+KP N+++DQ K++DFG +K + + + GT YLAP+ +S N
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
D ++ GVL+ ++ G D+ + Y
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 17/211 (8%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V K ++ G A+K+L V+ KQ E ++E + + LVKL
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLE 107
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V +Y + L + +F R A I Y+H
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS---L 160
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
+++RD+KP N+++DQ K++DFG +K + + + GT YLAP+ +S N
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
D ++ GVL+ ++ G D+ + Y
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEF----MSEVASMAN 104
AT+ + ++G G +G+VYK + G VA+K SV GE+ + EVA +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 105 IC---HENLVKLHGGCIEGPCR-----IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARRE 156
+ H N+V+L C +V++++ + +T L + + T + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL--RTYLDKAPPPGLPAETIK-D 116
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ RGL ++H IVHRD+KP NIL+ K++DFGL++++ + V
Sbjct: 117 LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 217 AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQI 249
TL Y AP+ + D++S G + ++
Sbjct: 174 --TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 30/211 (14%)
Query: 60 VGEGGFGSVYKGKLQD--------GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+G+G F ++KG ++ T V +KVL + + F + M+ + H++LV
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
+G C G I+V ++++ SL T L + KN W + E+A +A + ++ E
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLD-TYLKKNKNCINILW--KLEVAKQLAWAMHFLEEN 132
Query: 172 IKPSIVHRDIKPSNILL-----DQNFNP---KISDFGLS-KLFPEDITHISTRVAGTLGY 222
+++H ++ NILL + NP K+SD G+S + P+DI + R+ +
Sbjct: 133 ---TLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDI--LQERIP----W 183
Query: 223 LAPDYAVS-GHLNPKSDIYSFGVLLLQIVTG 252
+ P+ + +LN +D +SFG L +I +G
Sbjct: 184 VPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 36/234 (15%)
Query: 59 KVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKE-----FMSEVASMANICHENLVK 112
K+G+G FG V+K + + G VA+K + +E+ EKE + E+ + + HEN+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKHENVVN 81
Query: 113 LHGGCIEGP-----CR---IIVYDYMQNNS---LSQTLLGEEKNRAKFSWTARREIALGI 161
L C C+ +V+D+ +++ LS L+ KF+ + + + +
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-------KFTLSEIKRVMQML 134
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFP----EDITHISTRVA 217
GL YIH + I+HRD+K +N+L+ ++ K++DFGL++ F RV
Sbjct: 135 LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 218 GTLGYLAPDYAVSGH-LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEK 270
TL Y P+ + P D++ G ++ ++ T + + E + L+ +
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 27/250 (10%)
Query: 13 WPSNFSAEDTVGANFFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGK 72
W S + +G G + + + Y E + + +VG G FG V++ K
Sbjct: 36 WSSGSAKLQRLGPETEDNEGVLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVHRMK 94
Query: 73 -LQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQ 131
Q G AVK + +E + E E+ + A + +V L+G EGP I + ++
Sbjct: 95 DKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 149
Query: 132 NNSLSQTL--LG-EEKNRAKFSWTARREIALGIA-RGLAYIHEEIKPSIVHRDIKPSNIL 187
SL Q + +G ++RA + LG A GL Y+H I+H D+K N+L
Sbjct: 150 GGSLGQLIKQMGCLPEDRALYY--------LGQALEGLEYLHTR---RILHGDVKADNVL 198
Query: 188 LDQNFN-PKISDFGLSKLFPEDITHIS----TRVAGTLGYLAPDYAVSGHLNPKSDIYSF 242
L + + + DFG + D S + GT ++AP+ + + K DI+S
Sbjct: 199 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 258
Query: 243 GVLLLQIVTG 252
++L ++ G
Sbjct: 259 CCMMLHMLNG 268
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 36/234 (15%)
Query: 59 KVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKE-----FMSEVASMANICHENLVK 112
K+G+G FG V+K + + G VA+K + +E+ EKE + E+ + + HEN+V
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKHENVVN 80
Query: 113 LHGGCIEGP-----CR---IIVYDYMQNNS---LSQTLLGEEKNRAKFSWTARREIALGI 161
L C C+ +V+D+ +++ LS L+ KF+ + + + +
Sbjct: 81 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-------KFTLSEIKRVMQML 133
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFP----EDITHISTRVA 217
GL YIH + I+HRD+K +N+L+ ++ K++DFGL++ F RV
Sbjct: 134 LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 218 GTLGYLAPDYAVSGH-LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEK 270
TL Y P+ + P D++ G ++ ++ T + + E + L+ +
Sbjct: 191 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 243
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYKGKLQDGT-VVAVKVL--SVESKQGEKEFMS-EVASMANICHENLVKLHG 115
+G+GGF ++ D V A K++ S+ K ++E MS E++ ++ H+++V HG
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V + + SL L K R + R I G Y+H
Sbjct: 83 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---R 135
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+K N+ L+++ KI DFGL+ D + GT Y+AP+ +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSF 194
Query: 236 KSDIYSFGVLLLQIVTGQ 253
+ D++S G ++ ++ G+
Sbjct: 195 EVDVWSIGCIMYTLLVGK 212
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 36/234 (15%)
Query: 59 KVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKE-----FMSEVASMANICHENLVK 112
K+G+G FG V+K + + G VA+K + +E+ EKE + E+ + + HEN+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKHENVVN 81
Query: 113 LHGGCIEGP-----CRI---IVYDYMQNNS---LSQTLLGEEKNRAKFSWTARREIALGI 161
L C C+ +V+D+ +++ LS L+ KF+ + + + +
Sbjct: 82 LIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLV-------KFTLSEIKRVMQML 134
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFP----EDITHISTRVA 217
GL YIH + I+HRD+K +N+L+ ++ K++DFGL++ F RV
Sbjct: 135 LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 218 GTLGYLAPDYAVSGH-LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEK 270
TL Y P+ + P D++ G ++ ++ T + + E + L+ +
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 112/234 (47%), Gaps = 36/234 (15%)
Query: 59 KVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKE-----FMSEVASMANICHENLVK 112
K+G+G FG V+K + + G VA+K + +E+ EKE + E+ + + HEN+V
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKHENVVN 81
Query: 113 LHGGCIEGP-----CR---IIVYDYMQNNS---LSQTLLGEEKNRAKFSWTARREIALGI 161
L C C+ +V+D+ +++ LS L+ KF+ + + + +
Sbjct: 82 LIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-------KFTLSEIKRVMQML 134
Query: 162 ARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFP----EDITHISTRVA 217
GL YIH + I+HRD+K +N+L+ ++ K++DFGL++ F RV
Sbjct: 135 LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 218 GTLGYLAPDYAVSGH-LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVEK 270
TL Y P+ + P D++ G ++ ++ T + + E + L+ +
Sbjct: 192 -TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQ 244
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 109/250 (43%), Gaps = 27/250 (10%)
Query: 13 WPSNFSAEDTVGANFFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGK 72
W S + +G G + + + Y E + + +VG G FG V++ K
Sbjct: 20 WSSGSAKLQRLGPETEDNEGVLLTEKLKPVDY-EYREEVHWMTHQPRVGRGSFGEVHRMK 78
Query: 73 -LQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQ 131
Q G AVK + +E + E E+ + A + +V L+G EGP I + ++
Sbjct: 79 DKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133
Query: 132 NNSLSQTL--LG-EEKNRAKFSWTARREIALGIA-RGLAYIHEEIKPSIVHRDIKPSNIL 187
SL Q + +G ++RA + LG A GL Y+H I+H D+K N+L
Sbjct: 134 GGSLGQLIKQMGCLPEDRALYY--------LGQALEGLEYLHTR---RILHGDVKADNVL 182
Query: 188 LDQNFN-PKISDFGLSKLFPEDITHIS----TRVAGTLGYLAPDYAVSGHLNPKSDIYSF 242
L + + + DFG + D S + GT ++AP+ + + K DI+S
Sbjct: 183 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 242
Query: 243 GVLLLQIVTG 252
++L ++ G
Sbjct: 243 CCMMLHMLNG 252
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 27/249 (10%)
Query: 28 FTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQDGT-VVAVKVLS- 85
F KI+K I L+ + +G G FG V + + V A+K+LS
Sbjct: 56 FLNRYEKIVKKIRG-----LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSK 110
Query: 86 --VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE 143
+ + F E MA +V+L + +V +YM L + +
Sbjct: 111 FEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD 170
Query: 144 --KNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ AKF +TA +AL + ++HRD+KP N+LLD++ + K++DFG
Sbjct: 171 VPEKWAKF-YTAEVVLALDAIHSMG---------LIHRDVKPDNMLLDKHGHLKLADFGT 220
Query: 202 S-KLFPEDITHISTRVAGTLGYLAPDYAVS----GHLNPKSDIYSFGVLLLQIVTGQAAV 256
K+ + H T V GT Y++P+ S G+ + D +S GV L +++ G
Sbjct: 221 CMKMDETGMVHCDTAV-GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
Query: 257 HFDKELGEY 265
+ D +G Y
Sbjct: 280 YADSLVGTY 288
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEF----MSEVASMAN 104
AT+ + ++G G +G+VYK + G VA+K SV GE+ + EVA +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 105 IC---HENLVKLHGGCIEGPCR-----IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARRE 156
+ H N+V+L C +V++++ + +T L + + T + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL--RTYLDKAPPPGLPAETIK-D 116
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ RGL ++H IVHRD+KP NIL+ K++DFGL++++ + V
Sbjct: 117 LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
Query: 217 AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQI 249
TL Y AP+ + D++S G + ++
Sbjct: 174 --TLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 60 VGEGGFGSVYK-GKLQDGTVVAVKVL--SVESKQGEKEFMS-EVASMANICHENLVKLHG 115
+G+GGF Y+ + V A KV+ S+ K +KE MS E+A ++ + ++V HG
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V + + SL L K R + R +G+ Y+H
Sbjct: 94 FFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---R 146
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+K N+ L+ + + KI DFGL+ D + GT Y+AP+ +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 236 KSDIYSFGVLLLQIVTGQAA 255
+ DI+S G +L ++ G+
Sbjct: 206 EVDIWSLGCILYTLLVGKPP 225
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 25/223 (11%)
Query: 46 ELKSA-TNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVAS 101
E+KS T F K+G G FGSV+K K DG + A+K + E+ + EV +
Sbjct: 2 EMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYA 61
Query: 102 MANI-CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG 160
A + H ++V+ E +I +Y SL+ + + + F +++ L
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQ 121
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKIS-------DFGLSKLFPE--DITH 211
+ RGL YIH S+VH DIKPSNI + + P + D+ +K+ + D+ H
Sbjct: 122 VGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGH 178
Query: 212 ISTRVA------GTLGYLAPDYAVSGHLN-PKSDIYSFGVLLL 247
+ TR++ G +LA + + + PK+DI++ + ++
Sbjct: 179 V-TRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 126/294 (42%), Gaps = 35/294 (11%)
Query: 49 SATNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC- 106
S T+ + +G+G F V + KL G A K+++ +K+ ++ A IC
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIIN--TKKLSARDHQKLEREARICR 58
Query: 107 ---HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
H N+V+LH E +V+D + L + ++ R +S I
Sbjct: 59 LLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA----REYYSEADASHCIQQILE 114
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFN---PKISDFGLSKLFPEDITHISTRVAGTL 220
+ + H+ +VHRD+KP N+LL K++DFGL+ D AGT
Sbjct: 115 AVLHCHQM---GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD-QQAWFGFAGTP 170
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG--------QAAVHFDKELGEYYLVEKAW 272
GYL+P+ DI++ GV+L ++ G Q ++ + G Y W
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEW 230
Query: 273 EMHNTDKLQHLVDPMLCGN----FSGNEAVRFLKVGLLCVQEK-SSLRPRMSTV 321
+ T + ++L++ ML N + +EA LK +C + +S+ R TV
Sbjct: 231 DT-VTPEAKNLINQMLTINPAKRITAHEA---LKHPWVCQRSTVASMMHRQETV 280
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYK-GKLQDGTVVAVKVL--SVESKQGEKEFMS-EVASMANICHENLVKLHG 115
+G+GGF Y+ + V A KV+ S+ K +KE MS E+A ++ + ++V HG
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V + + SL L K R + R +G+ Y+H
Sbjct: 110 FFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---R 162
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+K N+ L+ + + KI DFGL+ D + GT Y+AP+ +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 236 KSDIYSFGVLLLQIVTGQ 253
+ DI+S G +L ++ G+
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 60 VGEGGFGSVYKGKLQDGT-VVAVKVL--SVESKQGEKEFMS-EVASMANICHENLVKLHG 115
+G+GGF ++ D V A K++ S+ K ++E MS E++ ++ H+++V HG
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V + + SL L K R + R I G Y+H
Sbjct: 107 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---R 159
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+K N+ L+++ KI DFGL+ D + GT Y+AP+ +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSF 218
Query: 236 KSDIYSFGVLLLQIVTGQAA 255
+ D++S G ++ ++ G+
Sbjct: 219 EVDVWSIGCIMYTLLVGKPP 238
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 39/280 (13%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQDGTV--VAVKVLSVESKQGEKEFMSEVASMANI 105
K+ + + S +G G G V K + T VA+K++S ++ A
Sbjct: 6 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 64
Query: 106 CHENLVKLHGGCI-------EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIA 158
E L KL+ CI + IV + M+ L ++G ++ + ++
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTR 215
L + Y+HE I+HRD+KP N+LL +++ KI+DFG SK+ E T +
Sbjct: 125 LAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 175
Query: 216 VAGTLGYLAPDYAVS---GHLNPKSDIYSFGVLLLQIVTG---------QAAVHFDKELG 263
+ GT YLAP+ VS N D +S GV+L ++G Q ++ G
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
Query: 264 EYYLVEKAWEMHNTDKLQHLVDPMLC----GNFSGNEAVR 299
+Y + + W ++K LV +L F+ EA+R
Sbjct: 236 KYNFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 60 VGEGGFGSVYKGKLQDGT-VVAVKVL--SVESKQGEKEFMS-EVASMANICHENLVKLHG 115
+G+GGF ++ D V A K++ S+ K ++E MS E++ ++ H+++V HG
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V + + SL L K R + R I G Y+H
Sbjct: 109 FFEDNDFVFVVLELCRRRSL----LELHKRRKALTEPEARYYLRQIVLGCQYLHRN---R 161
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+K N+ L+++ KI DFGL+ D + GT Y+AP+ +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPEVLSKKGHSF 220
Query: 236 KSDIYSFGVLLLQIVTGQAA 255
+ D++S G ++ ++ G+
Sbjct: 221 EVDVWSIGCIMYTLLVGKPP 240
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 39/280 (13%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQDGTV--VAVKVLSVESKQGEKEFMSEVASMANI 105
K+ + + S +G G G V K + T VA+K++S ++ A
Sbjct: 5 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 63
Query: 106 CHENLVKLHGGCI-------EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIA 158
E L KL+ CI + IV + M+ L ++G ++ + ++
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 123
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTR 215
L + Y+HE I+HRD+KP N+LL +++ KI+DFG SK+ E T +
Sbjct: 124 LAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 174
Query: 216 VAGTLGYLAPDYAVS---GHLNPKSDIYSFGVLLLQIVTG---------QAAVHFDKELG 263
+ GT YLAP+ VS N D +S GV+L ++G Q ++ G
Sbjct: 175 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 234
Query: 264 EYYLVEKAWEMHNTDKLQHLVDPMLC----GNFSGNEAVR 299
+Y + + W ++K LV +L F+ EA+R
Sbjct: 235 KYNFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALR 273
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 19/244 (7%)
Query: 27 FFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLS 85
F K+ LK S N + + F +G G FG V K ++ G A+K+L
Sbjct: 18 FLAKAKEDFLKKWETPSQN--TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD 75
Query: 86 ----VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLG 141
V+ KQ E ++E + + LVKL + +V +Y+ + L
Sbjct: 76 KQKVVKLKQIEHT-LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL-- 132
Query: 142 EEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGL 201
+ +FS R A I Y+H +++RD+KP N+L+DQ +++DFG
Sbjct: 133 --RRIGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGF 187
Query: 202 SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+K + + + GT LAP+ +S N D ++ GVL+ ++ G D+
Sbjct: 188 AK----RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
Query: 262 LGEY 265
+ Y
Sbjct: 244 IQIY 247
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 39/280 (13%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQDGTV--VAVKVLSVESKQGEKEFMSEVASMANI 105
K+ + + S +G G G V K + T VA+K++S ++ A
Sbjct: 6 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 64
Query: 106 CHENLVKLHGGCI-------EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIA 158
E L KL+ CI + IV + M+ L ++G ++ + ++
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTR 215
L + Y+HE I+HRD+KP N+LL +++ KI+DFG SK+ E T +
Sbjct: 125 LAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 175
Query: 216 VAGTLGYLAPDYAVS---GHLNPKSDIYSFGVLLLQIVTG---------QAAVHFDKELG 263
+ GT YLAP+ VS N D +S GV+L ++G Q ++ G
Sbjct: 176 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 235
Query: 264 EYYLVEKAWEMHNTDKLQHLVDPMLC----GNFSGNEAVR 299
+Y + + W ++K LV +L F+ EA+R
Sbjct: 236 KYNFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 100/208 (48%), Gaps = 18/208 (8%)
Query: 51 TNGFCSSNKVGEGGFGSVYKGKLQDGTVV--AVKVLSVESKQGEKEFMSEVASMANICHE 108
T+G+ +G G + SV K + T + AVK++ +SK+ E + + H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIID-KSKRDPTEEIEILLRYGQ--HP 76
Query: 109 NLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
N++ L +G +V + M+ L +L ++ FS + I + + Y+
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF----FSEREASAVLFTITKTVEYL 132
Query: 169 HEEIKPSIVHRDIKPSNIL-LDQNFNP---KISDFGLSKLFPEDITHISTRVAGTLGYLA 224
H + +VHRD+KPSNIL +D++ NP +I DFG +K + + T T ++A
Sbjct: 133 HAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVA 188
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
P+ + DI+S GVLL ++TG
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTG 216
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 60 VGEGGFGSVYK-GKLQDGTVVAVKVL--SVESKQGEKEFMS-EVASMANICHENLVKLHG 115
+G+GGF Y+ + V A KV+ S+ K +KE MS E+A ++ + ++V HG
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V + + SL L K R + R +G+ Y+H
Sbjct: 110 FFEDDDFVYVVLEICRRRSL----LELHKRRKAVTEPEARYFMRQTIQGVQYLHNN---R 162
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNP 235
++HRD+K N+ L+ + + KI DFGL+ D + GT Y+AP+ +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 236 KSDIYSFGVLLLQIVTGQ 253
+ DI+S G +L ++ G+
Sbjct: 222 EVDIWSLGCILYTLLVGK 239
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 13/198 (6%)
Query: 59 KVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
++G G FG V++ + G V K ++ + +E++ M + H L+ LH
Sbjct: 58 ELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF 117
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ +++ +++ L + E+ K S GL ++HE SIV
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMHEH---SIV 171
Query: 178 HRDIKPSNILLD--QNFNPKISDFGL-SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
H DIKP NI+ + + + KI DFGL +KL P++I ++T T + AP+ +
Sbjct: 172 HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPEIVDREPVG 228
Query: 235 PKSDIYSFGVLLLQIVTG 252
+D+++ GVL +++G
Sbjct: 229 FYTDMWAIGVLGYVLLSG 246
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ + +G G FG VY+ KL D G +VA+K + Q ++ E+ M + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 112 KL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKNRAKFSWTA--RREIALGIARGLA 166
+L + G + +VY + + + +T+ + +RAK + + + R LA
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRV--AGTL 220
YIH I HRDIKP N+LLD + K+ DFG +K +++ I +R A L
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ A DY S D++S G +L +++ GQ
Sbjct: 194 IFGATDYTSS------IDVWSAGCVLAELLLGQ 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 121/280 (43%), Gaps = 39/280 (13%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQDGTV--VAVKVLSVESKQGEKEFMSEVASMANI 105
K+ + + S +G G G V K + T VA+K++S ++ A
Sbjct: 12 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVET 70
Query: 106 CHENLVKLHGGCI-------EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIA 158
E L KL+ CI + IV + M+ L ++G ++ + ++
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 130
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTR 215
L + Y+HE I+HRD+KP N+LL +++ KI+DFG SK+ E T +
Sbjct: 131 LAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 181
Query: 216 VAGTLGYLAPDYAVS---GHLNPKSDIYSFGVLLLQIVTG---------QAAVHFDKELG 263
+ GT YLAP+ VS N D +S GV+L ++G Q ++ G
Sbjct: 182 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 241
Query: 264 EYYLVEKAWEMHNTDKLQHLVDPMLC----GNFSGNEAVR 299
+Y + + W ++K LV +L F+ EA+R
Sbjct: 242 KYNFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALR 280
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 110/236 (46%), Gaps = 25/236 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 11 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 70
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 71 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 126
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 127 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 183
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
K ++++I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 184 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQ 233
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 25/155 (16%)
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTL 220
+ Y+HE I+HRD+KP N+LL +++ KI+DFG SK+ E T + + GT
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRTLCGTP 180
Query: 221 GYLAPDYAVS---GHLNPKSDIYSFGVLLLQIVTG---------QAAVHFDKELGEYYLV 268
YLAP+ VS N D +S GV+L ++G Q ++ G+Y +
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFI 240
Query: 269 EKAWEMHNTDKLQHLVDPMLC----GNFSGNEAVR 299
+ W ++K LV +L F+ EA+R
Sbjct: 241 PEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALR 274
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 22/214 (10%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFMS-----EVASMA 103
AT+ + ++G G +G+VYK + G VA+K + V + G + EVA +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 104 NIC---HENLVKLHGGCIEGPCR-----IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR 155
+ H N+V+L C +V++++ + +T L + + T +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL--RTYLDKAPPPGLPAETIK- 123
Query: 156 EIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTR 215
++ RGL ++H IVHRD+KP NIL+ K++DFGL++++ + T
Sbjct: 124 DLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTP 178
Query: 216 VAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQI 249
V TL Y AP+ + D++S G + ++
Sbjct: 179 VVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 50 ATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEF----MSEVASMAN 104
AT+ + ++G G +G+VYK + G VA+K SV GE+ + EVA +
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALK--SVRVPNGEEGLPISTVREVALLRR 59
Query: 105 IC---HENLVKLHGGCIEGPCR-----IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARRE 156
+ H N+V+L C +V++++ + +T L + + T + +
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDL--RTYLDKAPPPGLPAETIK-D 116
Query: 157 IALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRV 216
+ RGL ++H IVHRD+KP NIL+ K++DFGL++++ + V
Sbjct: 117 LMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LDPV 171
Query: 217 AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQI 249
TL Y AP+ + D++S G + ++
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 204
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ + +G G FG VY+ KL D G +VA+K + QG+ E+ M + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 112 KL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKNRAKFSWTA--RREIALGIARGLA 166
+L + G + VY + + + +T+ + +RAK + + + R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRV--AGTL 220
YIH I HRDIKP N+LLD + K+ DFG +K ++++I +R A L
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ A DY S D++S G +L +++ GQ
Sbjct: 194 IFGATDYTSS------IDVWSAGCVLAELLLGQ 220
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 39/280 (13%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQDGTV--VAVKVLSVESKQGEKEFMSEVASMANI 105
K+ + + S +G G G V K + T VA++++S ++ A
Sbjct: 145 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVET 203
Query: 106 CHENLVKLHGGCI-------EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIA 158
E L KL+ CI + IV + M+ L ++G ++ + ++
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 263
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTR 215
L + Y+HE I+HRD+KP N+LL +++ KI+DFG SK+ E T +
Sbjct: 264 LAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 314
Query: 216 VAGTLGYLAPDYAVS---GHLNPKSDIYSFGVLLLQIVTG---------QAAVHFDKELG 263
+ GT YLAP+ VS N D +S GV+L ++G Q ++ G
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 374
Query: 264 EYYLVEKAWEMHNTDKLQHLVDPMLC----GNFSGNEAVR 299
+Y + + W ++K LV +L F+ EA+R
Sbjct: 375 KYNFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALR 413
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ + +G G FG VY+ KL D G +VA+K + QG+ E+ M + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 112 KL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKNRAKFSWTA--RREIALGIARGLA 166
+L + G + VY + + + +T+ + +RAK + + + R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRV--AGTL 220
YIH I HRDIKP N+LLD + K+ DFG +K ++++I +R A L
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ A DY S D++S G +L +++ GQ
Sbjct: 194 IFGATDYTSS------IDVWSAGCVLAELLLGQ 220
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 27/250 (10%)
Query: 13 WPSNFSAEDTVGANFFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGK 72
W S + +G G + + + Y E + + ++G G FG V++ K
Sbjct: 34 WSSGSAKLQRLGPETEDNEGVLLTEKLKPVDY-EYREEVHWMTHQPRLGRGSFGEVHRMK 92
Query: 73 -LQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQ 131
Q G AVK + +E + E E+ + A + +V L+G EGP I + ++
Sbjct: 93 DKQTGFQCAVKKVRLEVFRVE-----ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 147
Query: 132 NNSLSQTL--LG-EEKNRAKFSWTARREIALGIA-RGLAYIHEEIKPSIVHRDIKPSNIL 187
SL Q + +G ++RA + LG A GL Y+H I+H D+K N+L
Sbjct: 148 GGSLGQLIKQMGCLPEDRALYY--------LGQALEGLEYLHTR---RILHGDVKADNVL 196
Query: 188 LDQNFN-PKISDFGLSKLFPEDITHIS----TRVAGTLGYLAPDYAVSGHLNPKSDIYSF 242
L + + + DFG + D S + GT ++AP+ + + K DI+S
Sbjct: 197 LSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 256
Query: 243 GVLLLQIVTG 252
++L ++ G
Sbjct: 257 CCMMLHMLNG 266
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 39/280 (13%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQDGTV--VAVKVLSVESKQGEKEFMSEVASMANI 105
K+ + + S +G G G V K + T VA++++S ++ A
Sbjct: 131 KALRDEYIMSKTLGSGACGEV-KLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVET 189
Query: 106 CHENLVKLHGGCI-------EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIA 158
E L KL+ CI + IV + M+ L ++G ++ + ++
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 249
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTR 215
L + Y+HE I+HRD+KP N+LL +++ KI+DFG SK+ E T +
Sbjct: 250 LAVQ----YLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 300
Query: 216 VAGTLGYLAPDYAVS---GHLNPKSDIYSFGVLLLQIVTG---------QAAVHFDKELG 263
+ GT YLAP+ VS N D +S GV+L ++G Q ++ G
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSG 360
Query: 264 EYYLVEKAWEMHNTDKLQHLVDPMLC----GNFSGNEAVR 299
+Y + + W ++K LV +L F+ EA+R
Sbjct: 361 KYNFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALR 399
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 51 TNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANI-C 106
T F K+G G FGSV+K K DG + A+K + E+ + EV + A +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H ++V+ E +I +Y SL+ + + + F +++ L + RGL
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKIS-------DFGLSKLFPE--DITHISTRVA 217
YIH S+VH DIKPSNI + + P + D+ +K+ + D+ H+ TR++
Sbjct: 126 YIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV-TRIS 181
Query: 218 ------GTLGYLAPDYAVSGHLN-PKSDIYSFGVLLL 247
G +LA + + + PK+DI++ + ++
Sbjct: 182 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 218
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLS----VESKQGEKEFMSEVASMANICHENLVKLH 114
+G G FG V K ++ G A+K+L V+ KQ E ++E + + L KL
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNFPFLTKLE 108
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ +V +Y + L + +F R A I Y+H
Sbjct: 109 FSFKDNSNLYMVMEYAPGGEMFSHL----RRIGRFXEPHARFYAAQIVLTFEYLHS---L 161
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
+++RD+KP N+++DQ K++DFG +K + + + GT YLAP+ +S N
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 235 PKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
D ++ GVL+ ++ G D+ + Y
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 26 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 85
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 86 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 141
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 142 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 198
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH 257
K ++++I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 199 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQPI-- 250
Query: 258 FDKELGEYYLVE 269
F + G LVE
Sbjct: 251 FPGDSGVDQLVE 262
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 51 TNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANIC- 106
T F K+G G FGSV+K K DG + A+K + E+ + EV + A +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H ++V+ E +I +Y SL+ + + + F +++ L + RGL
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKIS-------DFGLSKLFPE--DITHISTRVA 217
YIH S+VH DIKPSNI + + P + D+ +K+ + D+ H+ TR++
Sbjct: 130 YIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV-TRIS 185
Query: 218 ------GTLGYLAPDYAVSGHLN-PKSDIYSFGVLLL 247
G +LA + + + PK+DI++ + ++
Sbjct: 186 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 222
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 24/217 (11%)
Query: 51 TNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANI-C 106
T F K+G G FGSV+K K DG + A+K + E+ + EV + A +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H ++V+ E +I +Y SL+ + + + F +++ L + RGL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKIS-------DFGLSKLFPE--DITHISTRVA 217
YIH S+VH DIKPSNI + + P + D+ +K+ + D+ H+ TR++
Sbjct: 128 YIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHV-TRIS 183
Query: 218 ------GTLGYLAPDYAVSGHLN-PKSDIYSFGVLLL 247
G +LA + + + PK+DI++ + ++
Sbjct: 184 SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVV 220
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 60 VGEGGFGSVYKGKLQDG-TVVAVKVLS---VESKQGEKEFMSEVASMANICHENLVKLHG 115
+G G FG V + + V A+K+LS + + F E MA +V+L
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEE--KNRAKFSWTARREIALGIARGLAYIHEEIK 173
+ +V +YM L + + + A+F +TA +AL + +IH
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF-YTAEVVLALDAIHSMGFIH---- 191
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLS-KLFPEDITHISTRVAGTLGYLAPDYAVS-- 230
RD+KP N+LLD++ + K++DFG K+ E + T V GT Y++P+ S
Sbjct: 192 -----RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQG 245
Query: 231 --GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
G+ + D +S GV L +++ G + D +G Y
Sbjct: 246 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY 282
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 23/206 (11%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVE----SKQGEKEFMSEVASMANICHENLVKLH 114
++G G F +VYKG L T V V ++ +K + F E + + H N+V+ +
Sbjct: 33 EIGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 115 GG---CIEGP-CRIIVYDYMQNNSLSQTLLGEEKNRAKF--SWTARREIALGIARGLAYI 168
++G C ++V + + +L L + + K SW + I +GL ++
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFL 145
Query: 169 HEEIKPSIVHRDIKPSNILLD-QNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
H P I+HRD+K NI + + KI D GL+ L + V GT + AP+
Sbjct: 146 HTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL---KRASFAKAVIGTPEFXAPEX 201
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ + D+Y+FG L+ T +
Sbjct: 202 YEEKY-DESVDVYAFGXCXLEXATSE 226
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 60 VGEGGFGSVYKGKLQDG-TVVAVKVLS---VESKQGEKEFMSEVASMANICHENLVKLHG 115
+G G FG V + + V A+K+LS + + F E MA +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEE--KNRAKFSWTARREIALGIARGLAYIHEEIK 173
+ +V +YM L + + + A+F +TA +AL + +IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF-YTAEVVLALDAIHSMGFIH---- 196
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLS-KLFPEDITHISTRVAGTLGYLAPDYAVS-- 230
RD+KP N+LLD++ + K++DFG K+ E + T V GT Y++P+ S
Sbjct: 197 -----RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQG 250
Query: 231 --GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
G+ + D +S GV L +++ G + D +G Y
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY 287
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 32 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 91
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 92 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 147
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 148 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH 257
K ++++I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 205 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQPI-- 256
Query: 258 FDKELGEYYLVE 269
F + G LVE
Sbjct: 257 FPGDSGVDQLVE 268
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 60 VGEGGFGSVYKGKLQDG-TVVAVKVLS---VESKQGEKEFMSEVASMANICHENLVKLHG 115
+G G FG V + + V A+K+LS + + F E MA +V+L
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEE--KNRAKFSWTARREIALGIARGLAYIHEEIK 173
+ +V +YM L + + + A+F +TA +AL + +IH
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARF-YTAEVVLALDAIHSMGFIH---- 196
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLS-KLFPEDITHISTRVAGTLGYLAPDYAVS-- 230
RD+KP N+LLD++ + K++DFG K+ E + T V GT Y++P+ S
Sbjct: 197 -----RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQG 250
Query: 231 --GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
G+ + D +S GV L +++ G + D +G Y
Sbjct: 251 GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY 287
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 34 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 93
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 94 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 149
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 150 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 206
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH 257
K ++++I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 207 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQPI-- 258
Query: 258 FDKELGEYYLVE 269
F + G LVE
Sbjct: 259 FPGDSGVDQLVE 270
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 77 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 136
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 137 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 192
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 193 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 249
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH 257
K ++++I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 250 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQPI-- 301
Query: 258 FDKELGEYYLVE 269
F + G LVE
Sbjct: 302 FPGDSGVDQLVE 313
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 27/252 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 36 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 95
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 96 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 151
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 152 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 208
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH 257
K ++++I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 209 KQLVRGEPNVSYICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQPI-- 260
Query: 258 FDKELGEYYLVE 269
F + G LVE
Sbjct: 261 FPGDSGVDQLVE 272
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 27/245 (11%)
Query: 32 GAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVL--SVES 88
AK L + A S++ + + +G G +G V + + G VA+K + + +
Sbjct: 34 AAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV 93
Query: 89 KQGEKEFMSEVASMANICHENLVK----LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGE 142
K + E+ + + H+N++ L G + +V D M+++ L Q +
Sbjct: 94 VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESD-LHQIIHSS 152
Query: 143 EKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLS 202
+ + R + RGL Y+H ++HRD+KPSN+L+++N KI DFG++
Sbjct: 153 QP----LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205
Query: 203 KLF---PEDITHISTRVAGTLGYLAPDYAVSGHLNPKS-DIYSFGVLL------LQIVTG 252
+ P + + T T Y AP+ +S H ++ D++S G + Q+ G
Sbjct: 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 265
Query: 253 QAAVH 257
+ VH
Sbjct: 266 KNYVH 270
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 98/219 (44%), Gaps = 31/219 (14%)
Query: 58 NKVGEGGFGSV-YKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGG 116
K+GEGGF V L DG A+K + +Q +E E H N+++L
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 117 CIEGPCR----IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIA---LGIARGLAYIH 169
C+ ++ + + +L + E+ + K ++ +I LGI RGL IH
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEI---ERLKDKGNFLTEDQILWLLLGICRGLEAIH 151
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS-TRVAGTL-------- 220
+ HRD+KP+NILL P + D G + H+ +R A TL
Sbjct: 152 AK---GYAHRDLKPTNILLGDEGQPVLMDLGSMN---QACIHVEGSRQALTLQDWAAQRC 205
Query: 221 --GYLAPD-YAVSGH--LNPKSDIYSFGVLLLQIVTGQA 254
Y AP+ ++V H ++ ++D++S G +L ++ G+
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 29/291 (9%)
Query: 49 SATNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC- 106
S T+ + ++G+G F V + K+ G A K+++ +K+ ++ A IC
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIIN--TKKLSARDHQKLEREARICR 58
Query: 107 ---HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
H N+V+LH E +V+D + L + ++ E + + + + I +
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-------YYSEADASHCIQQ 111
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTL 220
L ++ IVHRD+KP N+LL + K++DFGL+ D AGT
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFGFAGTP 170
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG--------QAAVHFDKELGEYYLVEKAW 272
GYL+P+ D+++ GV+L ++ G Q ++ + G Y W
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 230
Query: 273 EMHNTDKLQHLVDPMLCGNFSGN-EAVRFLKVGLLCVQEK-SSLRPRMSTV 321
+ T + + L++ ML N + A LK +C + +S+ R TV
Sbjct: 231 DT-VTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETV 280
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 104/213 (48%), Gaps = 25/213 (11%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ + +G G FG VY+ KL D G +VA+K + Q ++ E+ M + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 112 KL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKNRAKFSWTA--RREIALGIARGLA 166
+L + G + VY + + + +T+ + +RAK + + + R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRV--AGTL 220
YIH I HRDIKP N+LLD + K+ DFG +K ++++I +R A L
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ A DY S D++S G +L +++ GQ
Sbjct: 194 IFGATDYTSS------IDVWSAGCVLAELLLGQ 220
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEKE-FMSEVASMANIC-HENLV 111
+G G FG V + K VAVK+L + E+E MSE+ ++ + H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWT-----------------AR 154
L G C G +++ +Y L L + R F +
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELALDLEDL 147
Query: 155 REIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST 214
+ +A+G+A++ + + +HRD+ NILL KI DFGL++ D ++
Sbjct: 148 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 204
Query: 215 RVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A + ++AP+ + +SD++S+G+ L ++ +
Sbjct: 205 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 10 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 69
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 70 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 125
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 126 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 182
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
K +++ I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 183 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQ 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 27/245 (11%)
Query: 32 GAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVL--SVES 88
AK L + A S++ + + +G G +G V + + G VA+K + + +
Sbjct: 35 AAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV 94
Query: 89 KQGEKEFMSEVASMANICHENLVK----LHGGCIEGPCR--IIVYDYMQNNSLSQTLLGE 142
K + E+ + + H+N++ L G + +V D M+++ L Q +
Sbjct: 95 VTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESD-LHQIIHSS 153
Query: 143 EKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLS 202
+ + R + RGL Y+H ++HRD+KPSN+L+++N KI DFG++
Sbjct: 154 QP----LTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 206
Query: 203 KLF---PEDITHISTRVAGTLGYLAPDYAVSGHLNPKS-DIYSFGVLL------LQIVTG 252
+ P + + T T Y AP+ +S H ++ D++S G + Q+ G
Sbjct: 207 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPG 266
Query: 253 QAAVH 257
+ VH
Sbjct: 267 KNYVH 271
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 127/291 (43%), Gaps = 29/291 (9%)
Query: 49 SATNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC- 106
S T+ + ++G+G F V + K+ G A K+++ +K+ ++ A IC
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIIN--TKKLSARDHQKLEREARICR 58
Query: 107 ---HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR 163
H N+V+LH E +V+D + L + ++ E + + + + I +
Sbjct: 59 LLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE-------YYSEADASHCIQQ 111
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTL 220
L ++ IVHRD+KP N+LL + K++DFGL+ D AGT
Sbjct: 112 ILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD-QQAWFGFAGTP 170
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG--------QAAVHFDKELGEYYLVEKAW 272
GYL+P+ D+++ GV+L ++ G Q ++ + G Y W
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 230
Query: 273 EMHNTDKLQHLVDPMLCGNFSGN-EAVRFLKVGLLCVQEK-SSLRPRMSTV 321
+ T + + L++ ML N + A LK +C + +S+ R TV
Sbjct: 231 DT-VTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETV 280
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEKE-FMSEVASMANIC-HENLV 111
+G G FG V + K VAVK+L + E+E MSE+ ++ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF-----------------SWTAR 154
L G C G +++ +Y L L + R F
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 155 REIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST 214
+ +A+G+A++ + + +HRD+ NILL KI DFGL++ D ++
Sbjct: 171 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVK 227
Query: 215 RVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A + ++AP+ + +SD++S+G+ L ++ +
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEKE-FMSEVASMANIC-HENLV 111
+G G FG V + K VAVK+L + E+E MSE+ ++ + H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF-----------------SWTAR 154
L G C G +++ +Y L L + R F
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELALDLEDL 163
Query: 155 REIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST 214
+ +A+G+A++ + + +HRD+ NILL KI DFGL++ D ++
Sbjct: 164 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 220
Query: 215 RVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A + ++AP+ + +SD++S+G+ L ++ +
Sbjct: 221 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 10 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 69
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 70 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 125
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 126 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 182
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
K +++ I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 183 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQ 232
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEKE-FMSEVASMANIC-HENLV 111
+G G FG V + K VAVK+L + E+E MSE+ ++ + H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF-----------------SWTAR 154
L G C G +++ +Y L L + R F
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELALDLEDL 165
Query: 155 REIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST 214
+ +A+G+A++ + + +HRD+ NILL KI DFGL++ D ++
Sbjct: 166 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 222
Query: 215 RVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A + ++AP+ + +SD++S+G+ L ++ +
Sbjct: 223 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 17 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 76
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 77 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 132
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 133 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 189
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
K +++ I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 190 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQ 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 109/236 (46%), Gaps = 25/236 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 6 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 65
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 66 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 121
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 122 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 178
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
K +++ I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 179 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQ 228
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 60 VGEGGFGSVYKG------KLQDGTVVAVKVLSVESKQGEKE-FMSEVASMANIC-HENLV 111
+G G FG V + K VAVK+L + E+E MSE+ ++ + H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF-----------------SWTAR 154
L G C G +++ +Y L L + R F
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFL---RRKRDSFICSKTSPAIMEDDELALDLEDL 170
Query: 155 REIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST 214
+ +A+G+A++ + + +HRD+ NILL KI DFGL++ D ++
Sbjct: 171 LSFSYQVAKGMAFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVK 227
Query: 215 RVAG-TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
A + ++AP+ + +SD++S+G+ L ++ +
Sbjct: 228 GNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 120/282 (42%), Gaps = 46/282 (16%)
Query: 58 NKVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHG 115
K+ E G ++KG+ Q G + VKVL V S + ++F E + H N++ + G
Sbjct: 16 TKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLG 74
Query: 116 GCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
C P ++ +M SL L E + + AL +ARG+A++H ++
Sbjct: 75 ACQSPPAPHPTLITHWMPYGSLYNVL--HEGTNFVVDQSQAVKFALDMARGMAFLH-TLE 131
Query: 174 PSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHL 233
P I + ++++D++ +IS + S + G + AP + L
Sbjct: 132 PLIPRHALNSRSVMIDEDMTARISMADVK---------FSFQSPGRM--YAPAWVAPEAL 180
Query: 234 NPK--------SDIYSFGVLLLQIVTGQA--AVHFDKELGEYYLVEKAWEMHNTDKLQHL 283
K +D++SF VLL ++VT + A + E+G +E L+
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALE---------GLRPT 231
Query: 284 VDPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMI 325
+ P + + S K+ +C+ E + RP+ ++ ++
Sbjct: 232 IPPGISPHVS--------KLMKICMNEDPAKRPKFDMIVPIL 265
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 38/223 (17%)
Query: 59 KVGEGGFGSVYKG-KLQDGTVVAVKVL--SVESKQGEKEFMSEVASMANIC-HENLVKLH 114
K+G+G +G V+K + G VVAVK + + ++ + E+ + + HEN+V L
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 115 GGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARRE-IALGIARGLAYIHEE 171
R +V+DYM+ + L + RA ++ + + + + Y+H
Sbjct: 76 NVLRADNDRDVYLVFDYMETD-LHAVI------RANILEPVHKQYVVYQLIKVIKYLHS- 127
Query: 172 IKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFP--------------------EDITH 211
++HRD+KPSNILL+ + K++DFGLS+ F +D
Sbjct: 128 --GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 212 ISTRVAGTLGYLAPDYAVSGHLNPKS-DIYSFGVLLLQIVTGQ 253
I T T Y AP+ + K D++S G +L +I+ G+
Sbjct: 186 ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 44/224 (19%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQ----------------------DGTVVAVKVLSVESK 89
+ F +G GGFG V+ +++ G +V K+L+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 90 QGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF 149
+ + ++C + ++GG I R +Y+ ++N G ++ RA F
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTI-MNGGDI----RYHIYNVDEDNP------GFQEPRAIF 293
Query: 150 SWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDI 209
+TA+ I GL ++H+ +I++RD+KP N+LLD + N +ISD GL+
Sbjct: 294 -YTAQ------IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 210 THISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
T + AGT G++AP+ + + D ++ GV L +++ +
Sbjct: 344 TK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 26/251 (10%)
Query: 60 VGEGGFGSVYKGKLQDGT-VVAVKVLSVE---SKQGEKEFMSEVASMANICHENLVKLHG 115
+G+G FG V + D + A+K ++ + + + E+ M + H LV L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPS 175
+ +V D + L L + F + + L Y+ +
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHL----QQNVHFKEETVKLFICELVMALDYLQNQ---R 135
Query: 176 IVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS---GH 232
I+HRD+KP NILLD++ + I+DF ++ + P + T I+T +AGT Y+AP+ S
Sbjct: 136 IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-TQITT-MAGTKPYMAPEMFSSRKGAG 193
Query: 233 LNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLVE----------KAWEMHNTDKLQH 282
+ D +S GV +++ G+ H +V AW L+
Sbjct: 194 YSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLKK 253
Query: 283 LVDPMLCGNFS 293
L++P FS
Sbjct: 254 LLEPNPDQRFS 264
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 44/224 (19%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQ----------------------DGTVVAVKVLSVESK 89
+ F +G GGFG V+ +++ G +V K+L+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 90 QGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF 149
+ + ++C + ++GG I R +Y+ ++N G ++ RA F
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTI-MNGGDI----RYHIYNVDEDNP------GFQEPRAIF 293
Query: 150 SWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDI 209
+TA+ I GL ++H+ +I++RD+KP N+LLD + N +ISD GL+
Sbjct: 294 -YTAQ------IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 210 THISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
T + AGT G++AP+ + + D ++ GV L +++ +
Sbjct: 344 TK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 44/224 (19%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQ----------------------DGTVVAVKVLSVESK 89
+ F +G GGFG V+ +++ G +V K+L+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 90 QGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF 149
+ + ++C + ++GG I R +Y+ ++N G ++ RA F
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTI-MNGGDI----RYHIYNVDEDNP------GFQEPRAIF 293
Query: 150 SWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDI 209
+TA+ I GL ++H+ +I++RD+KP N+LLD + N +ISD GL+
Sbjct: 294 -YTAQ------IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 210 THISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
T + AGT G++AP+ + + D ++ GV L +++ +
Sbjct: 344 TK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 44/224 (19%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQ----------------------DGTVVAVKVLSVESK 89
+ F +G GGFG V+ +++ G +V K+L+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 90 QGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKF 149
+ + ++C + ++GG I R +Y+ ++N G ++ RA F
Sbjct: 245 RFIVSLAYAFETKTDLCLVMTI-MNGGDI----RYHIYNVDEDNP------GFQEPRAIF 293
Query: 150 SWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDI 209
+TA+ I GL ++H+ +I++RD+KP N+LLD + N +ISD GL+
Sbjct: 294 -YTAQ------IVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343
Query: 210 THISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
T + AGT G++AP+ + + D ++ GV L +++ +
Sbjct: 344 TK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAAR 386
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ + +G G FG VY+ KL D G +VA+K + + + +E M + H N+V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 81
Query: 112 KL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKNRAKFSWTA--RREIALGIARGLA 166
+L + G + VY + + + +T+ + +RAK + + + R LA
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRV--AGTL 220
YIH I HRDIKP N+LLD + K+ DFG +K ++++I +R A L
Sbjct: 142 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 198
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ A DY S D++S G +L +++ GQ
Sbjct: 199 IFGATDYTSS------IDVWSAGCVLAELLLGQ 225
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 27/252 (10%)
Query: 30 KSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVES 88
K G+K+ + + + + +G G FG VY+ KL D G +VA+K + +
Sbjct: 32 KDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK 91
Query: 89 KQGEKEFMSEVASMANICHENLVKL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKN 145
+ +E M + H N+V+L + G + VY + + + +T+ + +
Sbjct: 92 RFKNRELQI----MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYS 147
Query: 146 RAKFSWTA--RREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLS 202
RAK + + + R LAYIH I HRDIKP N+LLD + K+ DFG +
Sbjct: 148 RAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204
Query: 203 KLF---PEDITHISTRV--AGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH 257
K +++ I +R A L + A DY S D++S G +L +++ GQ
Sbjct: 205 KQLVRGEPNVSXICSRYYRAPELIFGATDYTSS------IDVWSAGCVLAELLLGQPI-- 256
Query: 258 FDKELGEYYLVE 269
F + G LVE
Sbjct: 257 FPGDSGVDQLVE 268
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 60 VGEGGFGSVYKGKLQDGT-VVAVKVLSVESKQGEKE---FMSEVASMANICHENLVKLHG 115
+G G FG V K+++ + A+K+L+ E F E + N + + LH
Sbjct: 82 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 141
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR-----AKFSWTARREIALGIARGLAYIHE 170
+ +V DY L TLL + +++ A+F + +A+ L Y
Sbjct: 142 AFQDENHLYLVMDYYVGGDL-LTLLSKFEDKLPEDMARF-YIGEMVLAIDSIHQLHY--- 196
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
VHRDIKP N+LLD N + +++DFG +D T S+ GT Y++P+ +
Sbjct: 197 ------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 231 -----GHLNPKSDIYSFGVLLLQIVTGQAAVH 257
G P+ D +S GV + +++ G+ +
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 282
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 60 VGEGGFGSVYKGKLQDGT-VVAVKVLSVESKQGEKE---FMSEVASMANICHENLVKLHG 115
+G G FG V K+++ + A+K+L+ E F E + N + + LH
Sbjct: 98 IGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHY 157
Query: 116 GCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR-----AKFSWTARREIALGIARGLAYIHE 170
+ +V DY L TLL + +++ A+F + +A+ L Y
Sbjct: 158 AFQDENHLYLVMDYYVGGDL-LTLLSKFEDKLPEDMARF-YIGEMVLAIDSIHQLHY--- 212
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
VHRDIKP N+LLD N + +++DFG +D T S+ GT Y++P+ +
Sbjct: 213 ------VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 231 -----GHLNPKSDIYSFGVLLLQIVTGQAAVH 257
G P+ D +S GV + +++ G+ +
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFY 298
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 99/216 (45%), Gaps = 31/216 (14%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ + +G G FG VY+ KL D G +VA+K + QG+ E+ M + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIV 76
Query: 112 KLH------GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTA--RREIALGIAR 163
+L G + +V DY+ + +RAK + + + R
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYR---VARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRV--A 217
LAYIH I HRDIKP N+LLD + K+ DFG +K +++ I +R A
Sbjct: 134 SLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRA 190
Query: 218 GTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
L + A DY S D++S G +L +++ GQ
Sbjct: 191 PELIFGATDYTSS------IDVWSAGCVLAELLLGQ 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 39/294 (13%)
Query: 51 TNGFCSSNKVGEGGFGSVYKGKLQDGT------VVAVKVLSVESKQGEKEFMSEVASMAN 104
T+ + ++G+G F V + + T ++ K LS Q ++ A
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ-------KLEREAR 82
Query: 105 IC----HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALG 160
IC H N+V+LH E +V+D + L + ++ R +S
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA----REYYSEADASHCIHQ 138
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFN---PKISDFGLSKLFPEDITHISTRVA 217
I + +IH+ IVHRD+KP N+LL K++DFGL+ + + A
Sbjct: 139 ILESVNHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFA 194
Query: 218 GTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG--------QAAVHFDKELGEYYLVE 269
GT GYL+P+ DI++ GV+L ++ G Q ++ + G Y
Sbjct: 195 GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPS 254
Query: 270 KAWEMHNTDKLQHLVDPMLCGNFSGN-EAVRFLKVGLLCVQEK-SSLRPRMSTV 321
W+ T + ++L++ ML N + A + LK +C + +S+ R TV
Sbjct: 255 PEWDT-VTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETV 307
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ + +G G FG VY+ KL D G +VA+K + Q ++ E+ M + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 112 KL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKNRAKFSWTA--RREIALGIARGLA 166
+L + G + VY + + + +T+ + +RAK + + + R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRV--AGTL 220
YIH I HRDIKP N+LLD + K+ DFG +K +++ I +R A L
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ A DY S D++S G +L +++ GQ
Sbjct: 194 IFGATDYTSS------IDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ + +G G FG VY+ KL D G +VA+K + Q ++ E+ M + H N+V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 77
Query: 112 KL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKNRAKFSWTA--RREIALGIARGLA 166
+L + G + VY + + + +T+ + +RAK + + + R LA
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRV--AGTL 220
YIH I HRDIKP N+LLD + K+ DFG +K +++ I +R A L
Sbjct: 138 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 194
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ A DY S D++S G +L +++ GQ
Sbjct: 195 IFGATDYTSS------IDVWSAGCVLAELLLGQ 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 103/213 (48%), Gaps = 25/213 (11%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ + +G G FG VY+ KL D G +VA+K + Q ++ E+ M + H N+V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIV 76
Query: 112 KL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKNRAKFSWTA--RREIALGIARGLA 166
+L + G + VY + + + +T+ + +RAK + + + R LA
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRV--AGTL 220
YIH I HRDIKP N+LLD + K+ DFG +K +++ I +R A L
Sbjct: 137 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ A DY S D++S G +L +++ GQ
Sbjct: 194 IFGATDYTSS------IDVWSAGCVLAELLLGQ 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 104/232 (44%), Gaps = 37/232 (15%)
Query: 52 NGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLS------------------------- 85
N + +++G+G +G V D T A+KVLS
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 86 -VESKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEK 144
++ + ++ E+A + + H N+VKL ++ P + YM ++Q + E
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKL-VEVLDDPNED--HLYMVFELVNQGPVMEVP 129
Query: 145 NRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKL 204
S R + +G+ Y+H + I+HRDIKPSN+L+ ++ + KI+DFG+S
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNE 186
Query: 205 FPEDITHISTRVAGTLGYLAPDYAVSGH--LNPKS-DIYSFGVLLLQIVTGQ 253
F +S V GT ++AP+ + K+ D+++ GV L V GQ
Sbjct: 187 FKGSDALLSNTV-GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 18/229 (7%)
Query: 49 SATNGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQG--EKEFMSEVASMANI 105
++ + + K+GEG +G VYK VA+K + +E ++ + EV+ + +
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL 90
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
H N+++L ++++Y +N+ L + + +KN S + + G+
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAEND-LKKYM---DKN-PDVSMRVIKSFLYQLINGV 145
Query: 166 AYIHEEIKPSIVHRDIKPSNILL---DQNFNP--KISDFGLSKLFPEDITHISTRVAGTL 220
+ H +HRD+KP N+LL D + P KI DFGL++ F I + + TL
Sbjct: 146 NFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TL 201
Query: 221 GYLAPDYAV-SGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYLV 268
Y P+ + S H + DI+S + +++ D E+ + + +
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI 250
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 32/228 (14%)
Query: 36 LKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKE 94
LK ++ E+ AT+ ++G G FG V++ + Q G AVK + +E + E
Sbjct: 81 LKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-- 134
Query: 95 FMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE----KNRAKFS 150
E+ + A + +V L+G EGP I + ++ SL Q L+ E+ ++RA +
Sbjct: 135 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYY 190
Query: 151 WTARREIALGIA-RGLAYIHEEIKPSIVHRDIKPSNILLDQN-FNPKISDFGLSKLFPED 208
LG A GL Y+H I+H D+K N+LL + + + DFG + D
Sbjct: 191 --------LGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD 239
Query: 209 ITHIS----TRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
S + GT ++AP+ + + K D++S ++L ++ G
Sbjct: 240 GLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 32/228 (14%)
Query: 36 LKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKE 94
LK ++ E+ AT+ ++G G FG V++ + Q G AVK + +E + E
Sbjct: 62 LKPVDYEYREEVHWATHQL----RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAE-- 115
Query: 95 FMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE----KNRAKFS 150
E+ + A + +V L+G EGP I + ++ SL Q L+ E+ ++RA +
Sbjct: 116 ---ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQ-LVKEQGCLPEDRALYY 171
Query: 151 WTARREIALGIA-RGLAYIHEEIKPSIVHRDIKPSNILLDQN-FNPKISDFGLSK-LFPE 207
LG A GL Y+H I+H D+K N+LL + + + DFG + L P+
Sbjct: 172 --------LGQALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPD 220
Query: 208 DITH---ISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+ + GT ++AP+ + + K D++S ++L ++ G
Sbjct: 221 GLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 102/213 (47%), Gaps = 25/213 (11%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ + +G G FG VY+ KL D G +VA+K + + + +E M + H N+V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQI----MRKLDHCNIV 80
Query: 112 KL-HGGCIEGPCRIIVYDYMQNNSLSQTL--LGEEKNRAKFSWTA--RREIALGIARGLA 166
+L + G + VY + + + +T+ + +RAK + + + R LA
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRV--AGTL 220
YIH I HRDIKP N+LLD + K+ DFG +K +++ I +R A L
Sbjct: 141 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 197
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
+ A DY S D++S G +L +++ GQ
Sbjct: 198 IFGATDYTSS------IDVWSAGCVLAELLLGQ 224
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 24/202 (11%)
Query: 60 VGEGGFG--SVYKGKLQDGTVVAVKVLSVESKQGEK---EFMSEVASMANICHENLVKLH 114
+G G FG + + K Q +VAVK + ++GEK E+ + ++ H N+V+
Sbjct: 27 IGAGNFGVARLMRDK-QANELVAVKYI----ERGEKIDENVKREIINHRSLRHPNIVRFK 81
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ IV +Y L + + N +FS R + G++Y H
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYAHAM--- 134
Query: 175 SIVHRDIKPSNILLDQNFNP--KISDFGLSKLFPEDITHISTRVA-GTLGYLAPDYAVSG 231
+ HRD+K N LLD + P KI+DFG SK + H + A GT Y+AP+ +
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAPEVLLKK 191
Query: 232 HLNPK-SDIYSFGVLLLQIVTG 252
+ K +D++S GV L ++ G
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVG 213
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 27/260 (10%)
Query: 19 AEDTVGANFFTKSGAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKL-QDGT 77
A+D A+F + +++ E++ + F +G G F V K+ Q G
Sbjct: 34 AQDKYVADFLQWAEPIVVR------LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQ 87
Query: 78 VVAVKVLSVES--KQGEKE-FMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNS 134
V A+K+++ K+GE F E + N + +LH + +V +Y
Sbjct: 88 VYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGD 147
Query: 135 LSQTLLGE--EKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNF 192
L TLL + E+ A+ + EI + I +H + VHRDIKP NILLD+
Sbjct: 148 L-LTLLSKFGERIPAEMARFYLAEIVMAIDS----VH---RLGYVHRDIKPDNILLDRCG 199
Query: 193 NPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD-------YAVSGHLNPKSDIYSFGVL 245
+ +++DFG D T S GT YL+P+ +G P+ D ++ GV
Sbjct: 200 HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVF 259
Query: 246 LLQIVTGQAAVHFDKELGEY 265
++ GQ + D Y
Sbjct: 260 AYEMFYGQTPFYADSTAETY 279
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 29/208 (13%)
Query: 60 VGEGGFGSVYKGKLQD-GTVVAVKVL---------SVESKQGEKEFMSEVASMANICHEN 109
+G G + V +L+ + A+KV+ ++ Q EK + ++ H
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-----HPF 82
Query: 110 LVKLHGGCIEGPCRII-VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
LV LH C + R+ V +Y+ L + + K + + EI+L L Y+
Sbjct: 83 LVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYL 137
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK--LFPEDITHISTRVAGTLGYLAPD 226
HE I++RD+K N+LLD + K++D+G+ K L P D T + GT Y+AP+
Sbjct: 138 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 191
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQA 254
D ++ GVL+ +++ G++
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRS 219
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 29/208 (13%)
Query: 60 VGEGGFGSVYKGKLQD-GTVVAVKVL---------SVESKQGEKEFMSEVASMANICHEN 109
+G G + V +L+ + A+KV+ ++ Q EK + ++ H
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-----HPF 67
Query: 110 LVKLHGGCIEGPCRII-VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
LV LH C + R+ V +Y+ L + + K + + EI+L L Y+
Sbjct: 68 LVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYL 122
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK--LFPEDITHISTRVAGTLGYLAPD 226
HE I++RD+K N+LLD + K++D+G+ K L P D T + GT Y+AP+
Sbjct: 123 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 176
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQA 254
D ++ GVL+ +++ G++
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRS 204
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 109/252 (43%), Gaps = 27/252 (10%)
Query: 58 NKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC----HENLVK 112
++G+G F V + K+ G A K+++ +K+ ++ A IC H N+V+
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIIN--TKKLSARDHQKLEREARICRLLKHPNIVR 85
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
LH E +++D + L + ++ R +S I + + H+
Sbjct: 86 LHDSISEEGHHYLIFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQM- 140
Query: 173 KPSIVHRDIKPSNILLDQNFN---PKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
+VHRD+KP N+LL K++DFGL+ + E AGT GYL+P+
Sbjct: 141 --GVVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLR 197
Query: 230 SGHLNPKSDIYSFGVLLLQIVTG--------QAAVHFDKELGEYYLVEKAWEMHNTDKLQ 281
D+++ GV+L ++ G Q ++ + G Y W+ T + +
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT-VTPEAK 256
Query: 282 HLVDPMLCGNFS 293
L++ ML N S
Sbjct: 257 DLINKMLTINPS 268
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMANICH 107
N F +G+G FG V K + G A+K+L E +K ++E + N H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 108 ENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALGIARG 164
L L V +Y L L E ++RA+F I
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSA 260
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLA 224
L Y+H E ++V+RD+K N++LD++ + KI+DFGL K +D + T GT YLA
Sbjct: 261 LDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLA 317
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
P+ D + GV++ +++ G+
Sbjct: 318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 29/208 (13%)
Query: 60 VGEGGFGSVYKGKLQD-GTVVAVKVL---------SVESKQGEKEFMSEVASMANICHEN 109
+G G + V +L+ + A+KV+ ++ Q EK + ++ H
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-----HPF 71
Query: 110 LVKLHGGCIEGPCRII-VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
LV LH C + R+ V +Y+ L + + K + + EI+L L Y+
Sbjct: 72 LVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYL 126
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK--LFPEDITHISTRVAGTLGYLAPD 226
HE I++RD+K N+LLD + K++D+G+ K L P D T + GT Y+AP+
Sbjct: 127 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPE 180
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQA 254
D ++ GVL+ +++ G++
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRS 208
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 17/209 (8%)
Query: 52 NGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMANICH 107
N F +G+G FG V K + G A+K+L E +K ++E + N H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 108 ENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALGIARG 164
L L V +Y L L E ++RA+F I
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAEIVSA 263
Query: 165 LAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLA 224
L Y+H E ++V+RD+K N++LD++ + KI+DFGL K +D + T GT YLA
Sbjct: 264 LDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT-FCGTPEYLA 320
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
P+ D + GV++ +++ G+
Sbjct: 321 PEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 51 TNGFCSSNKVGEGGFGSVYKGKLQDGT--VVAVKVLSVESKQGEKEFMSEVASMANICHE 108
T+G+ +G G + SV K + T AVK++ +SK+ E + + H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIID-KSKRDPTEEIEILLRYGQ--HP 76
Query: 109 NLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
N++ L +G +V + + L +L ++ FS + I + + Y+
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF----FSEREASAVLFTITKTVEYL 132
Query: 169 HEEIKPSIVHRDIKPSNIL-LDQNFNP---KISDFGLSKLFPEDITHISTRVAGTLGYLA 224
H + +VHRD+KPSNIL +D++ NP +I DFG +K + + T T ++A
Sbjct: 133 HAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVA 188
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
P+ + DI+S GVLL +TG
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 18/199 (9%)
Query: 60 VGEGGFG--SVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+G G FG + + K Q +VAVK + K E E+ + ++ H N+V+
Sbjct: 26 IGSGNFGVARLMRDK-QSNELVAVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVI 83
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ IV +Y L + + N +FS R + G++Y H +
Sbjct: 84 LTPTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAM---QVC 136
Query: 178 HRDIKPSNILLDQNFNP--KISDFGLSKLFPEDITHISTR-VAGTLGYLAPDYAVSGHLN 234
HRD+K N LLD + P KI DFG SK + H + GT Y+AP+ + +
Sbjct: 137 HRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYD 193
Query: 235 PK-SDIYSFGVLLLQIVTG 252
K +D++S GV L ++ G
Sbjct: 194 GKVADVWSCGVTLYVMLVG 212
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 105/245 (42%), Gaps = 21/245 (8%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSE-VASMANICH----ENLVKL 113
+G+G F V + + G AVK++ V +E + A+ICH ++V+L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
+V+++M L ++ +S I L Y H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-- 149
Query: 174 PSIVHRDIKPSNILL--DQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
+I+HRD+KP N+LL +N P K+ DFG++ E RV GT ++AP+
Sbjct: 150 -NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKR 207
Query: 231 GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKEL-------GEYYLVEKAWEMHNTDKLQHL 283
D++ GV+L +++G + KE G+Y + + W H ++ + L
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS-HISESAKDL 266
Query: 284 VDPML 288
V ML
Sbjct: 267 VRRML 271
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 92/202 (45%), Gaps = 24/202 (11%)
Query: 60 VGEGGFG--SVYKGKLQDGTVVAVKVLSVESKQGEK---EFMSEVASMANICHENLVKLH 114
+G G FG + + K Q +VAVK + ++GEK E+ + ++ H N+V+
Sbjct: 27 IGSGNFGVARLMRDK-QSNELVAVKYI----ERGEKIAANVKREIINHRSLRHPNIVRFK 81
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
+ IV +Y L + + N +FS R + G++Y H
Sbjct: 82 EVILTPTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAM--- 134
Query: 175 SIVHRDIKPSNILLDQNFNP--KISDFGLSKLFPEDITHISTR-VAGTLGYLAPDYAVSG 231
+ HRD+K N LLD + P KI DFG SK + H + GT Y+AP+ +
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 232 HLNPK-SDIYSFGVLLLQIVTG 252
+ K +D++S GV L ++ G
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVG 213
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
K N F +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALG 160
N H L L V +Y L L E + RA+F
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAE 113
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTL 220
I L Y+H +V+RDIK N++LD++ + KI+DFGL K D + T GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTP 169
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
YLAP+ D + GV++ +++ G+
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
K N F +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALG 160
N H L L V +Y L L E + RA+F
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAE 113
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTL 220
I L Y+H +V+RDIK N++LD++ + KI+DFGL K D + T GT
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTP 169
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
YLAP+ D + GV++ +++ G+
Sbjct: 170 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 89/213 (41%), Gaps = 18/213 (8%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
K N F +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 63
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALG 160
N H L L V +Y L L E + RA+F
Sbjct: 64 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAE 116
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTL 220
I L Y+H +V+RDIK N++LD++ + KI+DFGL K D + T GT
Sbjct: 117 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT-FCGTP 172
Query: 221 GYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
YLAP+ D + GV++ +++ G+
Sbjct: 173 EYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 104/232 (44%), Gaps = 24/232 (10%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQDGTVV--AVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ N +G G +G V K +Q GT + A K + + F E+ M ++ H N++
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
+L+ + +V + L + ++ ++ F + I + +AY H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCH-- 140
Query: 172 IKPSIVHRDIKPSNILL--DQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
K ++ HRD+KP N L D +P K+ DFGL+ F + T+V GT Y++P
Sbjct: 141 -KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKV-GTPYYVSPQ-V 196
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQA--AVHFDKEL------GEYYLVEKAW 272
+ G P+ D +S GV++ ++ G + D E+ G + EK W
Sbjct: 197 LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 248
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
K N F +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALG 160
N H L L V +Y L L E + RA+F
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAE 113
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST--RVAG 218
I L Y+H +V+RDIK N++LD++ + KI+DFGL K E I+ +T G
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCG 167
Query: 219 TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
T YLAP+ D + GV++ +++ G+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 29/208 (13%)
Query: 60 VGEGGFGSVYKGKLQD-GTVVAVKVL---------SVESKQGEKEFMSEVASMANICHEN 109
+G G + V +L+ + A++V+ ++ Q EK + ++ H
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN-----HPF 114
Query: 110 LVKLHGGCIEGPCRII-VYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
LV LH C + R+ V +Y+ L + + K + + EI+L L Y+
Sbjct: 115 LVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA----LNYL 169
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK--LFPEDITHISTRVAGTLGYLAPD 226
HE I++RD+K N+LLD + K++D+G+ K L P D T + GT Y+AP+
Sbjct: 170 HER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---STFCGTPNYIAPE 223
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQA 254
D ++ GVL+ +++ G++
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRS 251
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQDGTVV--AVKVLSVESKQGEKEFMSEVASMANICHENLV 111
+ N +G G +G V K +Q GT + A K + + F E+ M ++ H N++
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
+L+ + +V + L + ++ ++ F + I + +AY H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVV----HKRVFRESDAARIMKDVLSAVAYCH-- 123
Query: 172 IKPSIVHRDIKPSNILL--DQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
K ++ HRD+KP N L D +P K+ DFGL+ F + + T+V GT Y++P
Sbjct: 124 -KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF-KPGKMMRTKV-GTPYYVSPQ-V 179
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTGQA--AVHFDKEL------GEYYLVEKAW 272
+ G P+ D +S GV++ ++ G + D E+ G + EK W
Sbjct: 180 LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDW 231
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 60 VGEGGFG--SVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+G G FG + + KL +VAVK + + E E+ + ++ H N+V+
Sbjct: 28 IGSGNFGVARLMRDKLT-KELVAVKYIERGAAIDEN-VQREIINHRSLRHPNIVRFKEVI 85
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ I+ +Y L + + N +FS R + G++Y H I
Sbjct: 86 LTPTHLAIIMEYASGGELYERIC----NAGRFSEDEARFFFQQLLSGVSYCHSM---QIC 138
Query: 178 HRDIKPSNILLDQNFNP--KISDFGLSKLFPEDITHISTR-VAGTLGYLAPDYAVSGHLN 234
HRD+K N LLD + P KI DFG SK + H + GT Y+AP+ + +
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQEYD 195
Query: 235 PK-SDIYSFGVLLLQIVTGQAAVHFDKELGEY 265
K +D++S GV L ++ G +E +Y
Sbjct: 196 GKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY 227
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
K N F +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALG 160
N H L L V +Y L L E + RA+F
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAE 118
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST--RVAG 218
I L Y+H +V+RDIK N++LD++ + KI+DFGL K E I+ +T G
Sbjct: 119 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCG 172
Query: 219 TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
T YLAP+ D + GV++ +++ G+
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
K N F +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALG 160
N H L L V +Y L L E + RA+F
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAE 113
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST--RVAG 218
I L Y+H +V+RDIK N++LD++ + KI+DFGL K E I+ +T G
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCG 167
Query: 219 TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
T YLAP+ D + GV++ +++ G+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 91/215 (42%), Gaps = 22/215 (10%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
K N F +G+G FG V + + G A+K+L E +K ++E +
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALG 160
N H L L V +Y L L E + RA+F
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-------YGAE 113
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST--RVAG 218
I L Y+H +V+RDIK N++LD++ + KI+DFGL K E I+ +T G
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCG 167
Query: 219 TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
T YLAP+ D + GV++ +++ G+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 158 ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLF---PEDITHIST 214
+ +ARG+ ++ +HRD+ NILL +N KI DFGL++ P+ + T
Sbjct: 205 SFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDT 261
Query: 215 RVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
R+ L ++AP+ + KSD++S+GVLL +I +
Sbjct: 262 RLP--LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 98/215 (45%), Gaps = 31/215 (14%)
Query: 60 VGEGGFGSVYKGKLQDGT--VVAVKVL---------SVESKQGEKEFMSEVASMANICHE 108
+G+G FG V + GT + A+K+L VE EK ++ +
Sbjct: 27 LGKGSFGKVMLAD-RKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPF---- 81
Query: 109 NLVKLHGGCIEGPCRI-IVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAY 167
L +LH C + R+ V +Y+ L + + KF A I+ GL +
Sbjct: 82 -LTQLHS-CFQTVDRLYFVMEYVNGGDLMYHI----QQVGKFKEPQAVFYAAEISIGLFF 135
Query: 168 IHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTR-VAGTLGYLAPD 226
+H K I++RD+K N++LD + KI+DFG+ K D ++TR GT Y+AP+
Sbjct: 136 LH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD--GVTTREFCGTPDYIAPE 190
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
D +++GVLL +++ GQ FD E
Sbjct: 191 IIAYQPYGKSVDWWAYGVLLYEMLAGQPP--FDGE 223
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 104/228 (45%), Gaps = 26/228 (11%)
Query: 53 GFCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVK 112
+ + +G G FG V++ KL + VA+K + Q ++ E+ M + H N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIK----KVLQDKRFKNRELQIMRIVKHPNVVD 96
Query: 113 LHGGCIE-GPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTAR----REIALGIARGLAY 167
L G + V+ + + +T+ ++ AK T + + R LAY
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 168 IHEEIKPSIVHRDIKPSNILLDQNFNP-KISDFGLSKLF---PEDITHISTRVAGTLGYL 223
IH I HRDIKP N+LLD K+ DFG +K+ +++ I +R Y
Sbjct: 157 IHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY-----YR 208
Query: 224 APDYAVSGHLNPKS--DIYSFGVLLLQIVTGQAAVHFDKELGEYYLVE 269
AP+ + G N + DI+S G ++ +++ GQ F E G LVE
Sbjct: 209 APEL-IFGATNYTTNIDIWSTGCVMAELMQGQPL--FPGESGIDQLVE 253
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 158 ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH-ISTR- 215
A IA GL ++ + I++RD+K N++LD + KI+DFG+ K E+I ++T+
Sbjct: 127 AAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKX 180
Query: 216 VAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
GT Y+AP+ D ++FGVLL +++ GQA + E
Sbjct: 181 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 8/106 (7%)
Query: 158 ALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITH-ISTR- 215
A IA GL ++ + I++RD+K N++LD + KI+DFG+ K E+I ++T+
Sbjct: 448 AAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTTKX 501
Query: 216 VAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
GT Y+AP+ D ++FGVLL +++ GQA + E
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 70 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 185
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 240
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 57/99 (57%), Gaps = 10/99 (10%)
Query: 156 EIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTR 215
+IA+ I + L ++H ++ S++HRD+KPSN+L++ K DFG+S +D+
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDID- 196
Query: 216 VAGTLGYLAPDYAVSGHLNP-----KSDIYSFGVLLLQI 249
AG Y AP+ ++ LN KSDI+S G+ +++
Sbjct: 197 -AGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIEL 233
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 65 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 180
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 235
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 69 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 184
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 239
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 103
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 104 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 162
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 219
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 220 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 274
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 84 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 199
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 254
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 112 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 227
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 282
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 85 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 200
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 255
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 97 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 212
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 267
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 98/231 (42%), Gaps = 33/231 (14%)
Query: 32 GAKILKNINAFSYNELKSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE--- 87
GA +N F Y +L +G+G FG V K + G A+K+L E
Sbjct: 1 GAMARVTMNEFEYLKL------------LGKGTFGKVILVKEKATGRYYAMKILKKEVIV 48
Query: 88 SKQGEKEFMSEVASMANICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---K 144
+K ++E + N H L L V +Y L L E +
Sbjct: 49 AKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE 108
Query: 145 NRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKL 204
+RA+F I L Y+H E ++V+RD+K N++LD++ + KI+DFGL K
Sbjct: 109 DRARF-------YGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK- 158
Query: 205 FPEDITHIST--RVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
E I +T GT YLAP+ D + GV++ +++ G+
Sbjct: 159 --EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 70 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 185
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 240
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 98 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 213
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV-----SSECQHLI 268
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 97 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 212
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV-----SSECQHLI 267
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 13/200 (6%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVL--SVESKQGEKEFMSEVASMANICHENLVKLHGG 116
VG G +G+V + G VA+K L +S+ K E+ + ++ HEN++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
D+ T LG+ K + + + +GL YIH I
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGI 149
Query: 177 VHRDIKPSNILLDQNFNPKISDFGLSKLFPEDIT-HISTRVAGTLGYLAPDYAVSGHLNP 235
+HRD+KP N+ ++++ KI DFGL++ ++ + TR Y AP+ ++
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----WYRAPEVILNWMRYT 204
Query: 236 KS-DIYSFGVLLLQIVTGQA 254
++ DI+S G ++ +++TG+
Sbjct: 205 QTVDIWSVGCIMAEMITGKT 224
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 67
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 68 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 126
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 183
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 184 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 238
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 97 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 212
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV-----SSECQHLI 267
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 65 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 180
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV-----SSECQHLI 235
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 98 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 213
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV-----SSECQHLI 268
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 70 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 128
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 129 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 185
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 186 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 240
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 64
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 65 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 123
Query: 173 K----PSIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 180
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 181 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SXECQHLI 235
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 98 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 213
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV-----SXECQHLI 268
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 96
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 97 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 155
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 212
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 213 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV-----SXECQHLI 267
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 91
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 92 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 150
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 207
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 208 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SXECQHLI 262
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 85 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 200
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SXECQHLI 255
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 97
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 98 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 156
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 213
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 214 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRV-----SXECQHLI 268
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
+ N F +G+G FG V K + G A+K+L E +K ++E +
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALG 160
N H L L V +Y L L E ++RA+F
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAE 116
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST--RVAG 218
I L Y+H E ++V+RD+K N++LD++ + KI+DFGL K E I +T G
Sbjct: 117 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCG 171
Query: 219 TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
T YLAP+ D + GV++ +++ G+
Sbjct: 172 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 84
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 85 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 143
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 200
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 201 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SXECQHLI 255
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 83
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 84 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 142
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 199
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 200 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SXECQHLI 254
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 116
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 117 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 175
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 176 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 232
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 233 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SXECQHLI 287
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 48 KSATNGFCSSNKVGEGGFGSVYKGKLQ-DGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
+ N F +G+G FG V K + G A+K+L E +K ++E +
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEE---KNRAKFSWTARREIALG 160
N H L L V +Y L L E ++RA+F
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-------YGAE 118
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIST--RVAG 218
I L Y+H E ++V+RD+K N++LD++ + KI+DFGL K E I +T G
Sbjct: 119 IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCG 173
Query: 219 TLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
T YLAP+ D + GV++ +++ G+
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 111
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 112 SSGFSGVIRLLDW-FERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAV 170
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 227
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 228 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SXECQHLI 282
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 31/240 (12%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHEN----LVKLH 114
+G GGFGSVY G ++ D VA+K + EK+ +S+ + N L+K
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHV-------EKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 115 GGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSW-TARREIALGIARGLAY-IHEEI 172
G R++ + + + +S L E + F + T R + +AR + + E +
Sbjct: 69 SSGFSGVIRLLDW-FERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAV 127
Query: 173 KP----SIVHRDIKPSNILLDQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
+ ++HRDIK NIL+D N K+ DFG L + + T GT Y P++
Sbjct: 128 RHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY---TDFDGTRVYSPPEW 184
Query: 228 AVSGHLNPKS-DIYSFGVLLLQIVTGQAAVHFDKEL--GEYYLVEKAWEMHNTDKLQHLV 284
+ +S ++S G+LL +V G D+E+ G+ + ++ + + QHL+
Sbjct: 185 IRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-----SSECQHLI 239
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 37/257 (14%)
Query: 58 NKVGEGGFGSVYK------GKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC----H 107
++G+G F V + G+ ++ K LS Q ++ A IC H
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ-------KLEREARICRLLKH 69
Query: 108 ENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAY 167
N+V+LH E +++D + L + ++ R +S I + +
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLH 125
Query: 168 IHEEIKPSIVHRDIKPSNILLDQNFN---PKISDFGLSKLFPEDITHISTRVAGTLGYLA 224
H+ +VHR++KP N+LL K++DFGL+ + E AGT GYL+
Sbjct: 126 CHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLS 181
Query: 225 PDYAVSGHLNPKSDIYSFGVLLLQIVTG--------QAAVHFDKELGEYYLVEKAWEMHN 276
P+ D+++ GV+L ++ G Q ++ + G Y W+
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDT-V 240
Query: 277 TDKLQHLVDPMLCGNFS 293
T + + L++ ML N S
Sbjct: 241 TPEAKDLINKMLTINPS 257
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 18/153 (11%)
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIAL---GIAR 163
H N++ L +G +V + M+ L +L R KF + RE + I +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL-----RQKF--FSEREASFVLHTIGK 132
Query: 164 GLAYIHEEIKPSIVHRDIKPSNIL-LDQNFNP---KISDFGLSKLFPEDITHISTRVAGT 219
+ Y+H + +VHRD+KPSNIL +D++ NP +I DFG +K + + T T
Sbjct: 133 TVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-T 188
Query: 220 LGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
++AP+ + DI+S G+LL ++ G
Sbjct: 189 ANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 75/153 (49%), Gaps = 18/153 (11%)
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIAL---GIAR 163
H N++ L +G +V + M+ L +L R KF + RE + I +
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKIL-----RQKF--FSEREASFVLHTIGK 132
Query: 164 GLAYIHEEIKPSIVHRDIKPSNIL-LDQNFNP---KISDFGLSKLFPEDITHISTRVAGT 219
+ Y+H + +VHRD+KPSNIL +D++ NP +I DFG +K + + T T
Sbjct: 133 TVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCY-T 188
Query: 220 LGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
++AP+ + DI+S G+LL ++ G
Sbjct: 189 ANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG 221
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 60 VGEGGFG--SVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+G G FG + + K Q +VAVK + K E E+ + ++ H N+V+
Sbjct: 27 IGSGNFGVARLMRDK-QSNELVAVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVI 84
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ IV +Y L + + N +FS R + G++Y H +
Sbjct: 85 LTPTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAM---QVC 137
Query: 178 HRDIKPSNILLDQNFNP--KISDFGLSKLFPEDITHISTR-VAGTLGYLAPDYAVSGHLN 234
HRD+K N LLD + P KI FG SK + H + GT Y+AP+ + +
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLKKEYD 194
Query: 235 PK-SDIYSFGVLLLQIVTG 252
K +D++S GV L ++ G
Sbjct: 195 GKVADVWSCGVTLYVMLVG 213
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 60 VGEGGFG--SVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
+G G FG + + K Q +VAVK + K E E+ + ++ H N+V+
Sbjct: 27 IGSGNFGVARLMRDK-QSNELVAVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVI 84
Query: 118 IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIV 177
+ IV +Y L + + N +FS R + G++Y H +
Sbjct: 85 LTPTHLAIVMEYASGGELFERIC----NAGRFSEDEARFFFQQLISGVSYCHAM---QVC 137
Query: 178 HRDIKPSNILLDQNFNP--KISDFGLSKLFPEDITHISTR-VAGTLGYLAPDYAVSGHLN 234
HRD+K N LLD + P KI FG SK + H + GT Y+AP+ + +
Sbjct: 138 HRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYD 194
Query: 235 PK-SDIYSFGVLLLQIVTG 252
K +D++S GV L ++ G
Sbjct: 195 GKVADVWSCGVTLYVMLVG 213
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 146 RAKFSWTARREIALGIAR----GLAYIHEEIKPSIVHRDIKPSNILLDQN--FNPKISDF 199
R + R ++ I R L Y+H + I HRDIKP N L N F K+ DF
Sbjct: 158 RESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDF 214
Query: 200 GLSKLFPE----DITHISTRVAGTLGYLAPDY--AVSGHLNPKSDIYSFGVLLLQIVTG 252
GLSK F + + ++T+ AGT ++AP+ + PK D +S GVLL ++ G
Sbjct: 215 GLSKEFYKLNNGEYYGMTTK-AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMG 272
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 30/216 (13%)
Query: 54 FCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEF---MSEVASMANIC-HE 108
F +++G G +G V+K + +DG + AVK S+ +G K+ ++EV S + H
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR-SMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 109 NLVKLHGGCIEGPCRIIVYDYMQNNSLSQ--TLLGEEKNRAKFSWTARREIALGIARGLA 166
V+L EG + + + SL Q G A+ W R+ L LA
Sbjct: 118 CCVRLEQAWEEGGI-LYLQTELCGPSLQQHCEAWGASLPEAQV-WGYLRDTLLA----LA 171
Query: 167 YIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLG----- 221
++H + +VH D+KP+NI L K+ DFGL + + T AG +
Sbjct: 172 HLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGL-------LVELGTAGAGEVQEGDPR 221
Query: 222 YLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAVH 257
Y+AP+ + G +D++S G+ +L++ H
Sbjct: 222 YMAPEL-LQGSYGTAADVFSLGLTILEVACNMELPH 256
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVL-SVESKQGEKEFMSEVASMANICHENLVKLHGGC 117
KVG G +G VYK K +DG L +E E+A + + H N++ L
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 118 IEGPCRII--VYDYMQNNSLS----QTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
+ R + ++DY +++ K + + + I G+ Y+H
Sbjct: 88 LSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN 147
Query: 172 IKPSIVHRDIKPSNILL----DQNFNPKISDFGLSKLFPEDITHIS--TRVAGTLGYLAP 225
++HRD+KP+NIL+ + KI+D G ++LF + ++ V T Y AP
Sbjct: 148 W---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 204
Query: 226 DYAVSG-HLNPKSDIYSFGVLLLQIVTGQAAVHFDKE 261
+ + H DI++ G + +++T + H +E
Sbjct: 205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 113/281 (40%), Gaps = 46/281 (16%)
Query: 59 KVGEGGFGSVYKGKLQDGTVVAVKVLSVE--SKQGEKEFMSEVASMANICHENLVKLHGG 116
K+ E G ++KG+ Q G + VKVL V S + ++F E + H N++ + G
Sbjct: 17 KLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 117 CIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
C P ++ + SL L E + + AL ARG A++H ++P
Sbjct: 76 CQSPPAPHPTLITHWXPYGSLYNVL--HEGTNFVVDQSQAVKFALDXARGXAFLHT-LEP 132
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLN 234
I + ++ +D++ +IS + S + G AP + L
Sbjct: 133 LIPRHALNSRSVXIDEDXTARISXADVK---------FSFQSPGR--XYAPAWVAPEALQ 181
Query: 235 PK--------SDIYSFGVLLLQIVTGQA--AVHFDKELGEYYLVEKAWEMHNTDKLQHLV 284
K +D +SF VLL ++VT + A + E+G +E L+ +
Sbjct: 182 KKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALE---------GLRPTI 232
Query: 285 DPMLCGNFSGNEAVRFLKVGLLCVQEKSSLRPRMSTVIEMI 325
P + + S K+ +C E + RP+ ++ ++
Sbjct: 233 PPGISPHVS--------KLXKICXNEDPAKRPKFDXIVPIL 265
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 57 SNKVGEGGFGSVYKGKLQD-GTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLH 114
S+ +G+G +V++G+ + G + A+KV + + + M E + + H+N+VKL
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 115 GGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
E R +++ ++ SL T+L E N + + + G+ ++ E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSL-YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN- 131
Query: 173 KPSIVHRDIKPSNILL----DQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
IVHR+IKP NI+ D K++DFG ++ +D +S + GT YL PD
Sbjct: 132 --GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS--LYGTEEYLHPDMY 187
Query: 229 VSGHLNPKS--------DIYSFGVLLLQIVTG 252
L D++S GV TG
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 36/221 (16%)
Query: 51 TNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQ-GEKEFMSEVASMANICHE 108
++ F + +GEG +G V + G +VA+K + K + E+ + + HE
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 109 NLVKLHGGCIEGPCRI-------IVYDYMQNN---SLSQTLLGEEKNRAKFSWTARREIA 158
N++ + I+ P I+ + MQ + +S +L ++ + T R A
Sbjct: 70 NIITIFN--IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR---A 124
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS----- 213
+ + G +++HRD+KPSN+L++ N + K+ DFGL+++ E S
Sbjct: 125 VKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 214 ----TRVAGTLGYLAPDYAV-SGHLNPKSDIYSFGVLLLQI 249
T T Y AP+ + S + D++S G +L ++
Sbjct: 176 QSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 99/221 (44%), Gaps = 36/221 (16%)
Query: 51 TNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQ-GEKEFMSEVASMANICHE 108
++ F + +GEG +G V + G +VA+K + K + E+ + + HE
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 109 NLVKLHGGCIEGPCRI-------IVYDYMQNN---SLSQTLLGEEKNRAKFSWTARREIA 158
N++ + I+ P I+ + MQ + +S +L ++ + T R A
Sbjct: 70 NIITIFN--IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR---A 124
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS----- 213
+ + G +++HRD+KPSN+L++ N + K+ DFGL+++ E S
Sbjct: 125 VKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 214 ----TRVAGTLGYLAPDYAV-SGHLNPKSDIYSFGVLLLQI 249
T T Y AP+ + S + D++S G +L ++
Sbjct: 176 QSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 101/263 (38%), Gaps = 78/263 (29%)
Query: 60 VGEGGFGSVYKGKLQ-DGTVVAVKVLSVESKQGEKE-FMSEVASMANICHENLVKLHGGC 117
+G GGFG V++ K + D A+K + + +++ +E M EV ++A + H +V+
Sbjct: 14 MGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 73
Query: 118 IEG----------------------------------------------------PCRII 125
+E P
Sbjct: 74 LETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPK 133
Query: 126 VYDYMQNNSLSQTLLGEEKNRAKFSWTARRE-----IALGIARGLAYIHEEIKPSIVHRD 180
VY Y+Q + L + NR + S R I + IA + ++H + ++HRD
Sbjct: 134 VYLYIQMQLCRKENLKDWMNR-RCSLEDREHGVCLHIFIQIAEAVEFLHSK---GLMHRD 189
Query: 181 IKPSNILLDQNFNPKISDFGLSKLFPED-------------ITHISTRVAGTLGYLAPDY 227
+KPSNI + K+ DFGL +D TH GT Y++P+
Sbjct: 190 LKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ--VGTKLYMSPEQ 247
Query: 228 AVSGHLNPKSDIYSFGVLLLQIV 250
+ + K DI+S G++L +++
Sbjct: 248 IHGNNYSHKVDIFSLGLILFELL 270
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 25/214 (11%)
Query: 56 SSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICH--ENLVK 112
+S +GEG + V LQ+G AVK++ ++ EV ++ C +N+++
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ-CQGNKNILE 75
Query: 113 LHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
L + +V++ +Q S+ L + + F+ + +A L ++H +
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSI----LAHIQKQKHFNEREASRVVRDVAAALDFLHTK- 130
Query: 173 KPSIVHRDIKPSNILLD--QNFNP-KISDFGLSK--LFPEDITHIS----TRVAGTLGYL 223
I HRD+KP NIL + + +P KI DF L T I+ T G+ Y+
Sbjct: 131 --GIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYM 188
Query: 224 APDYA-----VSGHLNPKSDIYSFGVLLLQIVTG 252
AP+ + + + D++S GV+L +++G
Sbjct: 189 APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSG 222
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P+I DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPAF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKL- 113
+G G G V Y L+ VA+K LS +++ K E+ M + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 114 -----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
E IV + M N LSQ ++ E + + S+ + + G+ ++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN-LSQ-VIQMELDHERMSYLLYQMLV-----GIKHL 142
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H I+HRD+KPSNI++ + KI DFGL++ + + T T Y AP+
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTG 252
+ DI+S GV++ +++ G
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKL- 113
+G G G V Y L+ VA+K LS +++ K E+ M + H+N++ L
Sbjct: 32 IGSGAQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 114 -----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
E IV + M N LSQ ++ E + + S+ + + G+ ++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN-LSQ-VIQMELDHERMSYLLYQMLV-----GIKHL 142
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H I+HRD+KPSNI++ + KI DFGL++ + + T T Y AP+
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTG 252
+ DI+S GV++ +++ G
Sbjct: 198 LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 9/124 (7%)
Query: 145 NRAKFSWTARREIALGIARGLAYIHE-------EIKPSIVHRDIKPSNILLDQNFNPKIS 197
N + RR+ L R +A + + HRD+KP NIL+ + +
Sbjct: 117 NGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLV 176
Query: 198 DFGL-SKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQAAV 256
DFG+ S E +T + V GTL Y AP+ H ++DIY+ +L + +TG
Sbjct: 177 DFGIASATTDEKLTQLGNTV-GTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPY 235
Query: 257 HFDK 260
D+
Sbjct: 236 QGDQ 239
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-T 219
+A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++ A
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 220 LGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
L ++AP+ +SD++SFGVLL +I +
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-T 219
+A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++ A
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 220 LGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
L ++AP+ +SD++SFGVLL +I +
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-T 219
+A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++ A
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 220 LGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
L ++AP+ +SD++SFGVLL +I +
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAG-T 219
+A+G+ ++ +HRD+ NILL + KI DFGL++ +D ++ A
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 220 LGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
L ++AP+ +SD++SFGVLL +I +
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 57 SNKVGEGGFGSVYKGKLQD-GTVVAVKVLS-VESKQGEKEFMSEVASMANICHENLVKLH 114
S+ +G+G +V++G+ + G + A+KV + + + M E + + H+N+VKL
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 115 GGCIEGPCR--IIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEI 172
E R +++ ++ SL T+L E N + + + G+ ++ E
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSL-YTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN- 131
Query: 173 KPSIVHRDIKPSNILL----DQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
IVHR+IKP NI+ D K++DFG ++ +D + + GT YL PD
Sbjct: 132 --GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX--LYGTEEYLHPDMY 187
Query: 229 VSGHLNPKS--------DIYSFGVLLLQIVTG 252
L D++S GV TG
Sbjct: 188 ERAVLRKDHQKKYGATVDLWSIGVTFYHAATG 219
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 91/216 (42%), Gaps = 35/216 (16%)
Query: 54 FCSSNKVGEGGFGS-VYKGKLQDGTVVAVKVLSVES---KQGEKEFMSEVASMANI---- 105
FC + +G G G+ VY+G D VAVK + E E + + E N+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYF 84
Query: 106 CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGL 165
C E + IE C + +Y++ + LG E T+ GL
Sbjct: 85 CTEKDRQFQYIAIEL-CAATLQEYVEQKDFAH--LGLEPITLLQQTTS----------GL 131
Query: 166 AYIHEEIKPSIVHRDIKPSNILLDQ-----NFNPKISDFGLSKLFPEDITHISTR--VAG 218
A++H +IVHRD+KP NIL+ ISDFGL K S R V G
Sbjct: 132 AHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPG 188
Query: 219 TLGYLAPDY-AVSGHLNP--KSDIYSFGVLLLQIVT 251
T G++AP+ + NP DI+S G + +++
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 96/212 (45%), Gaps = 20/212 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF---NPKISDFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N KI DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQA 254
+AP+ L ++D++S GV+ +++G +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P+I DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P+I DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NP--KISDFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P KI DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQA 254
+AP+ L ++D++S GV+ +++G +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 127
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P+I DFGL+ D + + GT +
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 182
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P+I DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NP--KISDFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P KI DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P+I DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P+I DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 88/222 (39%), Gaps = 24/222 (10%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGGCI 118
+G+GGFG+V+ G +L D VA+KV+ G V + V GG
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGG-- 96
Query: 119 EGPCRIIVYDYMQNNS----------LSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
P I + D+ + +Q L + R + + +
Sbjct: 97 -HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 169 HEEIKPSIVHRDIKPSNILLD-QNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
H +VHRDIK NIL+D + K+ DFG L ++ T GT Y P++
Sbjct: 156 HSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPY---TDFDGTRVYSPPEW 209
Query: 228 AVSG--HLNPKSDIYSFGVLLLQIVTGQAAVHFDKELGEYYL 267
H P + ++S G+LL +V G D+E+ E L
Sbjct: 210 ISRHQYHALPAT-VWSLGILLYDMVCGDIPFERDQEILEAEL 250
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 127
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P+I DFGL+ D + + GT +
Sbjct: 128 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 182
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSG 212
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 21/245 (8%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSE-VASMANICH----ENLVKL 113
+G+G F V + + G AVK++ V +E + A+ICH ++V+L
Sbjct: 34 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 93
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
+V+++M L ++ +S I L Y H+
Sbjct: 94 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-- 151
Query: 174 PSIVHRDIKPSNILL--DQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
+I+HRD+KP +LL +N P K+ FG++ E RV GT ++AP+
Sbjct: 152 -NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKR 209
Query: 231 GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKEL-------GEYYLVEKAWEMHNTDKLQHL 283
D++ GV+L +++G + KE G+Y + + W H ++ + L
Sbjct: 210 EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS-HISESAKDL 268
Query: 284 VDPML 288
V ML
Sbjct: 269 VRRML 273
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 98/221 (44%), Gaps = 36/221 (16%)
Query: 51 TNGFCSSNKVGEGGFGSVYKGKLQD-GTVVAVKVLSVESKQ-GEKEFMSEVASMANICHE 108
++ F + +GEG +G V + G +VA+K + K + E+ + + HE
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 109 NLVKLHGGCIEGPCRI-------IVYDYMQNN---SLSQTLLGEEKNRAKFSWTARREIA 158
N++ + I+ P I+ + MQ + +S +L ++ + T R A
Sbjct: 70 NIITIFN--IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLR---A 124
Query: 159 LGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHIS----- 213
+ + G +++HRD+KPSN+L++ N + K+ DFGL+++ E S
Sbjct: 125 VKVLHG---------SNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 214 ----TRVAGTLGYLAPDYAV-SGHLNPKSDIYSFGVLLLQI 249
T Y AP+ + S + D++S G +L ++
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 21/245 (8%)
Query: 60 VGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSE-VASMANICH----ENLVKL 113
+G+G F V + + G AVK++ V +E + A+ICH ++V+L
Sbjct: 32 IGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
+V+++M L ++ +S I L Y H+
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN-- 149
Query: 174 PSIVHRDIKPSNILL--DQNFNP-KISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVS 230
+I+HRD+KP +LL +N P K+ FG++ E RV GT ++AP+
Sbjct: 150 -NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRV-GTPHFMAPEVVKR 207
Query: 231 GHLNPKSDIYSFGVLLLQIVTGQAAVHFDKEL-------GEYYLVEKAWEMHNTDKLQHL 283
D++ GV+L +++G + KE G+Y + + W H ++ + L
Sbjct: 208 EPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS-HISESAKDL 266
Query: 284 VDPML 288
V ML
Sbjct: 267 VRRML 271
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L +E + E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P+I DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 95/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH E +I+ + L E+++ + T E I G+
Sbjct: 73 HPNVITLHE-VYENKTDVILIGELVAGGELFDFLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P+I DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 59 KVGEGGFGSVYKGK-LQDGTVVAVKVLS-----VESKQGEKEFMSEVASMANICHENL-- 110
K+G G F +V+ K + + T VA+K++ E+ + E + + V N +++
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 111 ---VKL-----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
+KL H G G ++V++ + N L+ L+ + ++R ++I+ +
Sbjct: 86 NHILKLLDHFNHKGP-NGVHVVMVFEVLGENLLA--LIKKYEHRG-IPLIYVKQISKQLL 141
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP------KISDFGLSKLFPEDITH-ISTR 215
GL Y+H + I+H DIKP N+L++ +P KI+D G + + E T+ I TR
Sbjct: 142 LGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199
Query: 216 VAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
Y +P+ + +DI+S L+ +++TG
Sbjct: 200 -----EYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 54 FCSSNKVGEGGFGSVYKGK-----LQDGTVVAVKVLSVESKQG--EKEFMSEVASMANIC 106
+ + ++G G F V K + LQ K + S++G ++ EV+ + I
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 107 HENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLA 166
H N++ LH I++ + + L L E+++ + T E I G+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKESLTEEEAT---EFLKQILNGVY 128
Query: 167 YIHEEIKPSIVHRDIKPSNI-LLDQNF-NP--KISDFGLSKLFPEDITHISTRVAGTLGY 222
Y+H I H D+KP NI LLD+N P KI DFGL+ D + + GT +
Sbjct: 129 YLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI--DFGNEFKNIFGTPEF 183
Query: 223 LAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+AP+ L ++D++S GV+ +++G
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 59 KVGEGGFGSVYKGK-LQDGTVVAVKVLS-----VESKQGEKEFMSEVASMANICHENL-- 110
K+G G F +V+ K + + T VA+K++ E+ + E + + V N +++
Sbjct: 26 KLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGA 85
Query: 111 ---VKL-----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIA 162
+KL H G G ++V++ + N L+ L+ + ++R ++I+ +
Sbjct: 86 NHILKLLDHFNHKGP-NGVHVVMVFEVLGENLLA--LIKKYEHRG-IPLIYVKQISKQLL 141
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP------KISDFGLSKLFPEDITH-ISTR 215
GL Y+H + I+H DIKP N+L++ +P KI+D G + + E T+ I TR
Sbjct: 142 LGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199
Query: 216 VAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTGQ 253
Y +P+ + +DI+S L+ +++TG
Sbjct: 200 -----EYRSPEVLLGAPWGCGADIWSTACLIFELITGD 232
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 60 VGEGGFGSVYKGKLQDGTV-VAVKVLS--VESKQGEKEFMSEVASMANICHENLVKLHGG 116
+G G +G VY ++ VA+K ++ E K + E+ + + + +++LH
Sbjct: 36 IGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDL 95
Query: 117 CIEGPCRIIVYD--YMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKP 174
I P ++ +D Y+ L K + + I + G +IHE
Sbjct: 96 II--PEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHES--- 150
Query: 175 SIVHRDIKPSNILLDQNFNPKISDFGLSKLFPED 208
I+HRD+KP+N LL+Q+ + KI DFGL++ D
Sbjct: 151 GIIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 20/207 (9%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVL----SVESKQG--EKEFMSEVASMANICHENLV 111
++G G F V K + + G A K + S S++G +E EV+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
LH +++ + + L L +E S I G+ Y+H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHTK 134
Query: 172 IKPSIVHRDIKPSNI-LLDQNF---NPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
I H D+KP NI LLD+N + K+ DFGL+ + + + GT ++AP+
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEI 189
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTGQA 254
L ++D++S GV+ +++G +
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVL----SVESKQG--EKEFMSEVASMANICHENLV 111
++G G F V K + + G A K + S S++G +E EV+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
LH +++ + + L L +E S I G+ Y+H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHTK 134
Query: 172 IKPSIVHRDIKPSNI-LLDQNF---NPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
I H D+KP NI LLD+N + K+ DFGL+ + + + GT ++AP+
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEI 189
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTG 252
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVL----SVESKQG--EKEFMSEVASMANICHENLV 111
++G G F V K + + G A K + S S++G +E EV+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
LH +++ + + L L +E S I G+ Y+H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHTK 134
Query: 172 IKPSIVHRDIKPSNI-LLDQNF---NPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
I H D+KP NI LLD+N + K+ DFGL+ + + + GT ++AP+
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEI 189
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTG 252
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 44/236 (18%)
Query: 48 KSATNGFCSSNKVGEGGFGSV-YKGKLQDGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
+S N S +G G G+V ++G Q G VAVK + ++ E + ++E
Sbjct: 11 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDD-- 67
Query: 104 NICHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARRE---IAL- 159
H N+++ + C E R + Y ++ +L+ L E KN + + ++E I+L
Sbjct: 68 ---HPNVIRYY--CSETTDRFL-YIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 160 -GIARGLAYIHEEIKPSIVHRDIKPSNILLD-------------QNFNPKISDFGLSKLF 205
IA G+A++H I+HRD+KP NIL+ +N ISDFGL K
Sbjct: 122 RQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 178
Query: 206 PEDITHISTRV---AGTLGYLAPD-YAVSGHLNPKS------DIYSFGVLLLQIVT 251
+ T + +GT G+ AP+ S +L K DI+S G + I++
Sbjct: 179 DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILS 234
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVL----SVESKQG--EKEFMSEVASMANICHENLV 111
++G G F V K + + G A K + S S++G +E EV+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
LH +++ + + L L +E S I G+ Y+H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHTK 134
Query: 172 IKPSIVHRDIKPSNI-LLDQNF---NPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
I H D+KP NI LLD+N + K+ DFGL+ + + + GT ++AP+
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEI 189
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTG 252
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 59 KVGEGGFGSVYKGKLQD-GTVVAVKVL----SVESKQG--EKEFMSEVASMANICHENLV 111
++G G F V K + + G A K + S S++G +E EV+ + + H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 112 KLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEE 171
LH +++ + + L L +E S I G+ Y+H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHTK 134
Query: 172 IKPSIVHRDIKPSNI-LLDQNF---NPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDY 227
I H D+KP NI LLD+N + K+ DFGL+ + + + GT ++AP+
Sbjct: 135 ---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPEI 189
Query: 228 AVSGHLNPKSDIYSFGVLLLQIVTG 252
L ++D++S GV+ +++G
Sbjct: 190 VNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 25/204 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKL- 113
+G G G V Y L+ VA+K LS +++ K E+ M + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 114 -----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
E IV + M N LSQ ++ E + + S+ + + G+ ++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN-LSQ-VIQMELDHERMSYLLYQMLV-----GIKHL 142
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H I+HRD+KPSNI++ + KI DFGL++ + + T T Y AP+
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTG 252
+ DI+S G ++ +++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 20/206 (9%)
Query: 58 NKVGEGGFGSVYKGKLQD-GTVVAVKVL----SVESKQG--EKEFMSEVASMANICHENL 110
++G G F V K + + G A K + S S++G +E EV+ + + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
+ LH +++ + + L L +E S I G+ Y+H
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQILDGVNYLHT 133
Query: 171 EIKPSIVHRDIKPSNI-LLDQNF---NPKISDFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ I H D+KP NI LLD+N + K+ DFGL+ + + + GT ++AP+
Sbjct: 134 K---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVAPE 188
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTG 252
L ++D++S GV+ +++G
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSG 214
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 25/204 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKL- 113
+G G G V Y L+ VA+K LS +++ K E+ M + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 114 -----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
E IV + M N LSQ ++ E + + S+ + + G+ ++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN-LSQ-VIQMELDHERMSYLLYQMLC-----GIKHL 142
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H I+HRD+KPSNI++ + KI DFGL++ + + T T Y AP+
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTG 252
+ DI+S G ++ +++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 25/204 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKL- 113
+G G G V Y L+ VA+K LS +++ K E+ M + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 114 -----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
E IV + M N LSQ ++ E + + S+ + + G+ ++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN-LSQ-VIQMELDHERMSYLLYQMLC-----GIKHL 142
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H I+HRD+KPSNI++ + KI DFGL++ + + T T Y AP+
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTG 252
+ DI+S G ++ +++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 161 IARGLAYIHEEIKPSIVHRDIKPSNILLDQNF---NPKISDFGLSKLFPEDITHIST--R 215
I G+ Y+H+ +IVH D+KP NILL + + KI DFG+S+ I H
Sbjct: 140 ILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----KIGHACELRE 192
Query: 216 VAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVT 251
+ GT YLAP+ + +D+++ G++ ++T
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 25/204 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKL- 113
+G G G V Y L+ VA+K LS +++ K E+ M + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLL 89
Query: 114 -----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
E IV + M N LSQ ++ E + + S+ + + G+ ++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN-LSQ-VIQMELDHERMSYLLYQMLC-----GIKHL 142
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H I+HRD+KPSNI++ + KI DFGL++ + + T T Y AP+
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDATLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTG 252
+ DI+S G ++ +++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 98/227 (43%), Gaps = 50/227 (22%)
Query: 52 NGFCSSNKVGEGGFGSVYKG-KLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENL 110
N F K+G G FG +Y G +Q VA+K+ +V++K + + S++ +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRI-------- 58
Query: 111 VKLHGGC---------IEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR------ 155
L GG +EG ++V D LLG F++ +R+
Sbjct: 59 --LQGGTGIPNVRWFGVEGDYNVLVMD----------LLGPSLEDL-FNFCSRKLSLKTV 105
Query: 156 -EIALGIARGLAYIHEEIKPSIVHRDIKPSNILLDQNFNPK---ISDFGLSKLFPEDIT- 210
+A + + ++H + S +HRDIKP N L+ I DFGL+K + + T
Sbjct: 106 LMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162
Query: 211 -HISTRVAGTLGYLAPDYAVSGHL----NPKSDIYSFGVLLLQIVTG 252
HI R L A +V+ HL + + D+ S G +L+ + G
Sbjct: 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
G+ ++H I+HRD+KPSNI++ + KI DFGL++ + + T T Y
Sbjct: 136 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNF--MMTPYVVTRYYR 190
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTG----QAAVHFDK 260
AP+ + DI+S G ++ ++V G Q H D+
Sbjct: 191 APEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ 231
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR--EIALGIARGLAYIHEEIKPSIVHR 179
C +IV + + L + ++R ++T R EI I + Y+H +I HR
Sbjct: 87 CLLIVMECLDGGELFSRI----QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHR 139
Query: 180 DIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNP 235
D+KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKYDK 196
Query: 236 KSDIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 197 SCDMWSLGVIMYILLCG 213
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDI 181
C +IV + + L + +++ F+ EI I + Y+H +I HRD+
Sbjct: 103 CLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDV 157
Query: 182 KPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNPKS 237
KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 238 DIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 215 DMWSLGVIMYILLCG 229
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR--EIALGIARGLAYIHEEIKPSIVHR 179
C +IV + + L + ++R ++T R EI I + Y+H +I HR
Sbjct: 94 CLLIVMECLDGGELFSRI----QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHR 146
Query: 180 DIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNP 235
D+KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 147 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 203
Query: 236 KSDIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 204 SCDMWSLGVIMYILLCG 220
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR--EIALGIARGLAYIHEEIKPSIVHR 179
C +IV + + L + ++R ++T R EI I + Y+H +I HR
Sbjct: 88 CLLIVMECLDGGELFSRI----QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHR 140
Query: 180 DIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNP 235
D+KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 141 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 197
Query: 236 KSDIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 198 SCDMWSLGVIMYILLCG 214
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 22/161 (13%)
Query: 60 VGEGGFGSVYKG--KLQDGTVVAVKVLSV-ESKQGEKEFMSEVASMANICHENLVKLHGG 116
+G G +G V + KL+ V K+L V E K + E+A + + H+++VK+
Sbjct: 61 IGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDI 120
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIAR-------GLAYIH 169
+I D + + L L + + K T L I G+ Y+H
Sbjct: 121 -------VIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH 173
Query: 170 EEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKL--FPED 208
I+HRD+KP+N L++Q+ + K+ DFGL++ +PE+
Sbjct: 174 SA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR--EIALGIARGLAYIHEEIKPSIVHR 179
C +IV + + L + ++R ++T R EI I + Y+H +I HR
Sbjct: 87 CLLIVMECLDGGELFSRI----QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHR 139
Query: 180 DIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNP 235
D+KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 140 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 196
Query: 236 KSDIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 197 SCDMWSLGVIMYILLCG 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR--EIALGIARGLAYIHEEIKPSIVHR 179
C +IV + + L + ++R ++T R EI I + Y+H +I HR
Sbjct: 95 CLLIVMECLDGGELFSRI----QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHR 147
Query: 180 DIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNP 235
D+KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 148 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 204
Query: 236 KSDIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 205 SCDMWSLGVIMYILLCG 221
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR--EIALGIARGLAYIHEEIKPSIVHR 179
C +IV + + L + ++R ++T R EI I + Y+H +I HR
Sbjct: 89 CLLIVMECLDGGELFSRI----QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHR 141
Query: 180 DIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNP 235
D+KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 236 KSDIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 199 SCDMWSLGVIMYILLCG 215
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDI 181
C +I+ + M+ L + +E+ F+ EI I + ++H +I HRD+
Sbjct: 100 CLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV 154
Query: 182 KPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
KP N+L +++ K++DFG +K E + T Y+AP+ + D
Sbjct: 155 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 211
Query: 239 IYSFGVLLLQIVTG 252
++S GV++ ++ G
Sbjct: 212 MWSLGVIMYILLCG 225
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR--EIALGIARGLAYIHEEIKPSIVHR 179
C +IV + + L + ++R ++T R EI I + Y+H +I HR
Sbjct: 93 CLLIVMECLDGGELFSRI----QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHR 145
Query: 180 DIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNP 235
D+KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 146 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 202
Query: 236 KSDIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 203 SCDMWSLGVIMYILLCG 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 164 GLAYIHEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYL 223
G+ ++H I+HRD+KPSNI++ + KI DFGL++ + + T T Y
Sbjct: 138 GIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF--MMTPYVVTRYYR 192
Query: 224 APDYAVSGHLNPKSDIYSFGVLLLQIVTG----QAAVHFDK 260
AP+ + DI+S G ++ ++V G Q H D+
Sbjct: 193 APEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQ 233
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 38/231 (16%)
Query: 48 KSATNGFCSSNKVGEGGFGSV-YKGKLQDGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
+S N S +G G G+V ++G Q G VAVK + ++ E + ++E
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDDHP 87
Query: 104 NI----CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIAL 159
N+ C E + +E C + + D +++ ++S L +K S +
Sbjct: 88 NVIRYYCSETTDRFLYIALEL-CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ----- 141
Query: 160 GIARGLAYIHEEIKPSIVHRDIKPSNILLD-------------QNFNPKISDFGLSKLFP 206
IA G+A++H I+HRD+KP NIL+ +N ISDFGL K
Sbjct: 142 -IASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 207 EDITHISTRV---AGTLGYLAPDY---AVSGHLNPKSDIYSFGVLLLQIVT 251
+ +GT G+ AP+ + L DI+S G + I++
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 38/231 (16%)
Query: 48 KSATNGFCSSNKVGEGGFGSV-YKGKLQDGTVVAVKVLSVE---SKQGEKEFMSEVASMA 103
+S N S +G G G+V ++G Q G VAVK + ++ E + ++E
Sbjct: 29 QSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTESDDHP 87
Query: 104 NI----CHENLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIAL 159
N+ C E + +E C + + D +++ ++S L +K S +
Sbjct: 88 NVIRYYCSETTDRFLYIALEL-CNLNLQDLVESKNVSDENLKLQKEYNPISLLRQ----- 141
Query: 160 GIARGLAYIHEEIKPSIVHRDIKPSNILLD-------------QNFNPKISDFGLSKLFP 206
IA G+A++H I+HRD+KP NIL+ +N ISDFGL K
Sbjct: 142 -IASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 207 EDITHISTRV---AGTLGYLAPDY---AVSGHLNPKSDIYSFGVLLLQIVT 251
+ +GT G+ AP+ + L DI+S G + I++
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 88/212 (41%), Gaps = 29/212 (13%)
Query: 60 VGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFMSEVASMANIC-HENLVKLHGGC 117
+ EGGF VY+ + + G A+K L ++ + + EV M + H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 118 I-------EGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
G ++ + L + L + ++R S +I R + ++H
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVE-FLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 171 EIKPSIVHRDIKPSNILLDQNFNPKISDFGLSK----------------LFPEDITHIST 214
+ KP I+HRD+K N+LL K+ DFG + L E+IT +T
Sbjct: 155 Q-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTT 213
Query: 215 RVAGTLGYLAPDYAVSGHLNPKSDIYSFGVLL 246
+ T + D + + K DI++ G +L
Sbjct: 214 PMYRTPEII--DLYSNFPIGEKQDIWALGCIL 243
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR--EIALGIARGLAYIHEEIKPSIVHR 179
C +IV + + L + ++R ++T R EI I + Y+H +I HR
Sbjct: 139 CLLIVMECLDGGELFSRI----QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHR 191
Query: 180 DIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNP 235
D+KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 192 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 248
Query: 236 KSDIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 249 SCDMWSLGVIMYILLCG 265
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 11/134 (8%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSIVHRDI 181
C +I+ + M+ L + +E+ F+ EI I + ++H +I HRD+
Sbjct: 81 CLLIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDV 135
Query: 182 KPSNILL---DQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYAVSGHLNPKSD 238
KP N+L +++ K++DFG +K E + T Y+AP+ + D
Sbjct: 136 KPENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCD 192
Query: 239 IYSFGVLLLQIVTG 252
++S GV++ ++ G
Sbjct: 193 MWSLGVIMYILLCG 206
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR--EIALGIARGLAYIHEEIKPSIVHR 179
C +IV + + L + ++R ++T R EI I + Y+H +I HR
Sbjct: 133 CLLIVMECLDGGELFSRI----QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHR 185
Query: 180 DIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNP 235
D+KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 242
Query: 236 KSDIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 243 SCDMWSLGVIMYILLCG 259
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 16/137 (11%)
Query: 122 CRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARR--EIALGIARGLAYIHEEIKPSIVHR 179
C +IV + + L + ++R ++T R EI I + Y+H +I HR
Sbjct: 89 CLLIVMECLDGGELFSRI----QDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHR 141
Query: 180 DIKPSNILLDQ---NFNPKISDFGLSKLFPEDITHIS-TRVAGTLGYLAPDYAVSGHLNP 235
D+KP N+L N K++DFG +K E +H S T T Y+AP+ +
Sbjct: 142 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 198
Query: 236 KSDIYSFGVLLLQIVTG 252
D++S GV++ ++ G
Sbjct: 199 SCDMWSLGVIMYILLCG 215
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 92/221 (41%), Gaps = 40/221 (18%)
Query: 54 FCSSNKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQG----EKEFMSEVASMANICHE 108
F K+G G FG + GK L VA+K+ ++S+ E F ++ S I
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQV 70
Query: 109 NLVKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNR------AKFSWTARREIALGIA 162
GPC + N++ LLG FS IA+ +
Sbjct: 71 YYF--------GPC-------GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLI 115
Query: 163 RGLAYIHEEIKPSIVHRDIKPSNILLDQNFNP-----KISDFGLSKLF--PEDITHISTR 215
+ Y+H + ++++RD+KP N L+ + N I DFGL+K + PE HI R
Sbjct: 116 SRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYR 172
Query: 216 ----VAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+ GT Y++ + + + + D+ + G + + + G
Sbjct: 173 EHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 58 NKVGEGGFGSVYKGK-LQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKLHGG 116
K+G G FG + GK L VA+K+ ++S+ + E L +++
Sbjct: 6 KKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQVYYF 65
Query: 117 CIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIKPSI 176
G +V + + SL L + +R F+ IA+ + + Y+H + ++
Sbjct: 66 GPXGKYNAMVLELL-GPSLED--LFDLCDRT-FTLKTVLMIAIQLLSRMEYVHSK---NL 118
Query: 177 VHRDIKPSNILLDQNFNPK-----ISDFGLSKLF--PEDITHISTR----VAGTLGYLAP 225
++RD+KP N L+ + N K I DFGL+K + PE HI R + GT Y++
Sbjct: 119 IYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSI 178
Query: 226 DYAVSGHLNPKSDIYSFGVLLLQIVTG 252
+ + + + D+ + G + + + G
Sbjct: 179 NTHLGKEQSRRDDLEALGHMFMYFLRG 205
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 59 KVGEGGFGSVYK------GKLQDGTVVAVKVLSVESKQG--EKEFMSEVASMANICHENL 110
++G G F V K GK + + LS S++G +E EV + I H N+
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILREIRHPNI 70
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
+ LH +++ + + L L E+++ + T + I G+ Y+H
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFD-FLAEKESLTEDEAT---QFLKQILDGVHYLHS 126
Query: 171 EIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ I H D+KP NI LLD+N NP+I DFG++ + + + GT ++AP+
Sbjct: 127 K---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPE 181
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQA 254
L ++D++S GV+ +++G +
Sbjct: 182 IVNYEPLGLEADMWSIGVITYILLSGAS 209
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 22/208 (10%)
Query: 59 KVGEGGFGSVYK------GKLQDGTVVAVKVLSVESKQG--EKEFMSEVASMANICHENL 110
++G G F V K GK + + LS S++G +E EV + I H N+
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLS-SSRRGVSREEIEREVNILREIRHPNI 77
Query: 111 VKLHGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHE 170
+ LH +++ + + L L E+++ + T + I G+ Y+H
Sbjct: 78 ITLHDIFENKTDVVLILELVSGGELFD-FLAEKESLTEDEAT---QFLKQILDGVHYLHS 133
Query: 171 EIKPSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGYLAPD 226
+ I H D+KP NI LLD+N NP+I DFG++ + + + GT ++AP+
Sbjct: 134 K---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPE 188
Query: 227 YAVSGHLNPKSDIYSFGVLLLQIVTGQA 254
L ++D++S GV+ +++G +
Sbjct: 189 IVNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKL- 113
+G G G V Y L+ VA+K LS +++ K E+ M + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 114 -----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
E IV + M N L Q ++ E + + S+ + + G+ ++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN-LCQ-VIQMELDHERMSYLLYQMLC-----GIKHL 142
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H I+HRD+KPSNI++ + KI DFGL++ + + T T Y AP+
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTG 252
+ DI+S G ++ +++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKL- 113
+G G G V Y L+ VA+K LS +++ K E+ M + H+N++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 90
Query: 114 -----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
E IV + M N L Q ++ E + + S+ + + G+ ++
Sbjct: 91 NVFTPQKSLEEFQDVYIVMELMDAN-LCQ-VIQMELDHERMSYLLYQMLC-----GIKHL 143
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H I+HRD+KPSNI++ + KI DFGL++ + + T T Y AP+
Sbjct: 144 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 198
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTG 252
+ DI+S G ++ +++ G
Sbjct: 199 LGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 54 FCSSNKVGEGGFGSVYKGKLQDGTVVAVKVLSVESKQGEKEFMSEVASMANICHENLVKL 113
F K + G G Y K + ++ S +E EV + I H N++ L
Sbjct: 39 FAIVRKCRQKGTGKEYAAKF----IKKRRLXSSRRGVSREEIEREVNILREIRHPNIITL 94
Query: 114 HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYIHEEIK 173
H +++ + + L L E+++ + T + I G+ Y+H +
Sbjct: 95 HDIFENKTDVVLILELVSGGELFD-FLAEKESLTEDEAT---QFLKQILDGVHYLHSK-- 148
Query: 174 PSIVHRDIKPSNI-LLDQNF-NPKIS--DFGLSKLFPEDITHISTRVAGTLGYLAPDYAV 229
I H D+KP NI LLD+N NP+I DFG++ + + + GT ++AP+
Sbjct: 149 -RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI--EAGNEFKNIFGTPEFVAPEIVN 205
Query: 230 SGHLNPKSDIYSFGVLLLQIVTGQA 254
L ++D++S GV+ +++G +
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGAS 230
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKL- 113
+G G G V Y L+ VA+K LS +++ K E+ M + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 114 -----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
E IV + M N L Q ++ E + + S+ + + G+ ++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN-LCQ-VIQMELDHERMSYLLYQMLC-----GIKHL 142
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H I+HRD+KPSNI++ + KI DFGL++ + + T T Y AP+
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPYVVTRYYRAPEVI 197
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTG 252
+ DI+S G ++ +++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 92/204 (45%), Gaps = 25/204 (12%)
Query: 60 VGEGGFGSV---YKGKLQDGTVVAVKVLS--VESKQGEKEFMSEVASMANICHENLVKL- 113
+G G G V Y L+ VA+K LS +++ K E+ M + H+N++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLL 89
Query: 114 -----HGGCIEGPCRIIVYDYMQNNSLSQTLLGEEKNRAKFSWTARREIALGIARGLAYI 168
E IV + M N L Q ++ E + + S+ + + G+ ++
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDAN-LCQ-VIQMELDHERMSYLLYQMLC-----GIKHL 142
Query: 169 HEEIKPSIVHRDIKPSNILLDQNFNPKISDFGLSKLFPEDITHISTRVAGTLGYLAPDYA 228
H I+HRD+KPSNI++ + KI DFGL++ + + T T Y AP+
Sbjct: 143 HSA---GIIHRDLKPSNIVVKSDCTLKILDFGLART--AGTSFMMTPEVVTRYYRAPEVI 197
Query: 229 VSGHLNPKSDIYSFGVLLLQIVTG 252
+ DI+S G ++ +++ G
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 42/217 (19%)
Query: 59 KVGEGGFGSVYKG-KLQDGTVVAVKV--LSVESKQGEKEFMSEVASMANICHENLVKLHG 115
++GEG FG +++G L + VA+K ++ Q E+ + KL
Sbjct: 16 RIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRT-------------YKLLA 62
Query: 116 GCIEGPCRIIVYDYMQ---NNSLSQTLLGEEKNR------AKFSWTARREIALGIARGLA 166
GC P VY + Q +N L LLG KFS + +A+ + LA
Sbjct: 63 GCTGIPN---VYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSV---KTVAMAAKQMLA 116
Query: 167 YIHEEIKPSIVHRDIKPSNILL----DQNFNP-KISDFGLSKLFPEDIT--HISTR---- 215
+ + S+V+RDIKP N L+ +N N + DFG+ K + + +T HI R
Sbjct: 117 RVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKN 176
Query: 216 VAGTLGYLAPDYAVSGHLNPKSDIYSFGVLLLQIVTG 252
++GT Y++ + + + + D+ + G + + + G
Sbjct: 177 LSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 213
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,151,509
Number of Sequences: 62578
Number of extensions: 414254
Number of successful extensions: 3608
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 1212
Number of HSP's gapped (non-prelim): 1209
length of query: 353
length of database: 14,973,337
effective HSP length: 100
effective length of query: 253
effective length of database: 8,715,537
effective search space: 2205030861
effective search space used: 2205030861
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)