BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042386
(699 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6R0E3|TRP5_ARATH Telomere repeat-binding protein 5 OS=Arabidopsis thaliana GN=TRP5
PE=1 SV=2
Length = 630
Score = 534 bits (1376), Expect = e-151, Method: Compositional matrix adjust.
Identities = 351/710 (49%), Positives = 424/710 (59%), Gaps = 91/710 (12%)
Query: 1 MVLQKRLDYGFNGYQVPYTPRATRSARKRCSFKKRAEDNQMCAFDLLATVAGKLLLEKQC 60
MVLQKR DYGFNGY+VP+TPRA RS RK +FKK++E++Q+ +FDLLA VAGKLLLE
Sbjct: 1 MVLQKRPDYGFNGYEVPHTPRAARSPRK-SAFKKKSENHQISSFDLLAAVAGKLLLEGGN 59
Query: 61 TPSSSNTPSD--EDQSAVAKEIEQKAMQDENKQLKVETC----DQGSCDRGFFVSDLVSQ 114
+ SSSN S EDQ AV KE + + ++ ET D + +R FFVS+++ +
Sbjct: 60 SSSSSNNTSGNNEDQCAVKKE----PLNGGDIMVEEETTNSDHDNNNAERSFFVSEILQK 115
Query: 115 AHDQKCSLKPPSCQQADAHPGFASVITTSDCSEGFGDQKLVNGKPKNEMGTLASKVEVGP 174
+H+ + + PS + + H G +S TSD SE F Q+L + K G
Sbjct: 116 SHEMQSFNRSPSPLK-EFHFG-SSSGITSDSSEKFETQELAYDESKINNGDCYRSESNDK 173
Query: 175 SGYMGYGNCKVEAETNKFMKDESHKTAKVQLGTRADGCSFEDPLVWDGKPPAVSSDSSAK 234
+G N + + N KDE H G F P+ P S S
Sbjct: 174 KSMLGGLNFEAKLSRNVVGKDEKHI-----------GSGFRKPI------PQNPSTCSDD 216
Query: 235 APLCGDHSPHISFPASQDYVNVVSRDDDENSSGCTHPNTTKRSFRPAPRIGDRRIRKILA 294
L G + DD EN S C +SFR RIGDRRIRK+ A
Sbjct: 217 VDLHGKEN-----------------DDGENFSACYR----TKSFRSTLRIGDRRIRKVWA 255
Query: 295 SKYWKVAPKLKDATLSNTVLMVSDGDLKTVYHNRNSYYRSIRSERNYPIKKRRLFNCSSV 354
SKY KV PKLKD T++N SD DLK+ Y+++ +S+RSERNYPIKKRR F+ +
Sbjct: 256 SKYCKVPPKLKDTTVTN-----SDLDLKSDYYSKKHCLKSLRSERNYPIKKRRYFDGYTA 310
Query: 355 PNYDRKIRSEGICVSPERCINGDVSALCAKMHEVTGASSSVAGSHTSFQS-RDSH-VKLR 412
+ ++EG SP + S C K +FQS RDS+ VKL
Sbjct: 311 SQSEETNKNEGQSGSPRKASAFLSSIACQKQP-------------AAFQSPRDSNNVKLG 357
Query: 413 IKSFRVPELFIELPETATVGSLKRRVMEAVNAILGGGLRVGVLLQGKKVKDDNKTLLQTG 472
IKSFRVPELFIE+PETATVGSLKR V+EAV +ILGGGLR+GVL+ GKKV+DD+K LLQTG
Sbjct: 358 IKSFRVPELFIEIPETATVGSLKRTVLEAVTSILGGGLRIGVLVHGKKVRDDSKMLLQTG 417
Query: 473 ISHDNQKDVLGFSLEPKTSQTPPPLCSGDSPFMLPSNAPQPLARYPPAPGVVHQGTCDAV 532
+S D D LGF LEP Q+ PL DS F P N P L R P+PG
Sbjct: 418 LSLDTLSDTLGFCLEPNPPQSTKPLSPEDSDFARPCNVPHTLTRCLPSPG---------- 467
Query: 533 PELQMANAVNFIESDHDSAPSPTDMSIDKSTKDSKALVTVPAMSVEALAVVPVHRKSKRS 592
+ A N +ESD DS PS + T S+AL+ V + +AL VVP RK+KRS
Sbjct: 468 ---KHAKPSNSVESDLDSKPSAPNRG---KTIYSRALIPVSPLHAQALTVVPP-RKTKRS 520
Query: 593 EIVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHT 652
E+ QRRIRRPFSVAEVEALVQAVE+LGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHT
Sbjct: 521 EVAQRRIRRPFSVAEVEALVQAVERLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHT 580
Query: 653 ARISPQQRRGEPVPQELLDRVLTAHAYWTQQQAKQQF---KQQPETCLLL 699
ARISPQQRRGEPVPQELLDRVLTAHAYW+QQQ K Q QQ ET L L
Sbjct: 581 ARISPQQRRGEPVPQELLDRVLTAHAYWSQQQGKHQLLEGPQQLETSLGL 630
>sp|Q9FFY9|TRP4_ARATH Telomere repeat-binding protein 4 OS=Arabidopsis thaliana GN=TRP4
PE=1 SV=1
Length = 640
Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust.
Identities = 284/714 (39%), Positives = 387/714 (54%), Gaps = 95/714 (13%)
Query: 1 MVLQKRLDYG-FNGYQVPYTPRATRSARKRCSFKKRAEDNQMCAFDLLATVAGKLLLEKQ 59
MV++++L+ G NG+ P P+A RS+R++ S K+ +++++CA DLLA++AGKLL E +
Sbjct: 1 MVVKRKLNCGGSNGFDFPNIPKAPRSSRRKVSGKRSDDESEICAIDLLASLAGKLLEESE 60
Query: 60 CTPSSSNTPSDEDQSAVAKEIEQKAMQD--ENKQLKVETCDQG-----SCDRGFFVSDLV 112
+ +S+ ++ + I+Q+ ++D K K E D G S V+ L
Sbjct: 61 SSSTSTYASEADNLDHLGGLIKQE-LEDGYTTKPCKSEFFDPGNPASKSTSENTSVTCLP 119
Query: 113 SQAHDQKCSLK--PPS-CQQADAHPGFASVITTSDCSEGFGDQKLVNGKPKNEMGTLASK 169
+ + C L+ P S C++A IT C +VN +E G
Sbjct: 120 FSSFENDCILEQTPVSDCKRASGLKSLVGSITEETC--------VVNEDAGSEQGA---- 167
Query: 170 VEVGPSGYMGYGNCKVEAETNKF-MKDESHKTAKVQLGTRADGCSFEDPLVWDGKPPAVS 228
N F +KD S QL +++ P +V
Sbjct: 168 --------------------NTFSLKDPS------QLHSQS--------------PESVL 187
Query: 229 SDSSAKAPLCGDHSPHISFPASQDYVNVVSRDDDENSSGCTHPNTTKRSFRPAPRIGDRR 288
D K C D P+ SF +++ +V RDDDEN + +S+RP R+G+RR
Sbjct: 188 LDGDVKLAPCTDQVPNDSFKGYRNHSKLVCRDDDENYCKYYKFSDKCKSYRPLSRVGNRR 247
Query: 289 IRKILASKYWKVAPKLKDATLSNTVLMVSDGDLKTVYHNRNSYYRSIRSERNYPIKKRRL 348
I + + + KLK + T DG LK +Y R Y +R +KRRL
Sbjct: 248 IMQSV-----RAISKLKCFEDTRT-----DGRLKALYRKRKLCYGYNPWKRETIHRKRRL 297
Query: 349 FNCSSVPNYDRKIRSEGICVSPER--CINGDVSALCAKMHEVTGASSSVAGSHTSFQSRD 406
+ V NYD + SE + SPE+ NGD SA + S+D
Sbjct: 298 SDKGLVVNYDGGLSSESVSNSPEKGESENGDFSA-----------------AKIGLLSKD 340
Query: 407 SHVKLRIKSFRVPELFIELPETATVGSLKRRVMEAVNAILGGGLRVGVLLQGKKVKDDNK 466
S VK IKS R+PEL IE+PETATVG LKR V EAV A+LGGG+R+GVL+QGKKV+DDN
Sbjct: 341 SRVKFSIKSLRIPELVIEVPETATVGLLKRTVKEAVTALLGGGIRIGVLVQGKKVRDDNN 400
Query: 467 TLLQTGISHDNQKDVLGFSLEPKTSQTPPPLCSGDSPFMLPSNAPQPLARYPPAPGVVHQ 526
TL QTG+S LGF+LEP P PLCS LP+++ + R +P +
Sbjct: 401 TLSQTGLSCRENLGNLGFTLEPGLETLPVPLCSETPVLSLPTDSTKLSERSAASPALETG 460
Query: 527 GTCDAVPELQMANAVNFIESDHDSAPSPTDMSIDKS-TKDSKALVTVPAMSVEALAVVPV 585
E + N N +E++ + P +D+ D+ + DS+ALV V A+ +ALA+VPV
Sbjct: 461 IPLPPQDEDYLINLGNSVENNDELVPHLSDIPADEQPSSDSRALVPVLALESDALALVPV 520
Query: 586 HRKSKRSEIVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDK 645
+ K KR+E+ QRR RRPFSV EVEALV AVE++GTGRWRDVKLR+F+NA HRTYVDLKDK
Sbjct: 521 NEKPKRTELSQRRTRRPFSVTEVEALVSAVEEVGTGRWRDVKLRSFENASHRTYVDLKDK 580
Query: 646 WKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWTQQQAKQQFKQQPETCLLL 699
WKTLVHTA ISPQQRRGEPVPQELLDRVL AH YWTQ Q KQ K Q T +++
Sbjct: 581 WKTLVHTASISPQQRRGEPVPQELLDRVLGAHRYWTQHQMKQNGKHQVATTMVV 634
>sp|Q9C7B1|TRP3_ARATH Telomere repeat-binding protein 3 OS=Arabidopsis thaliana GN=TRP3
PE=1 SV=1
Length = 619
Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust.
Identities = 287/693 (41%), Positives = 392/693 (56%), Gaps = 101/693 (14%)
Query: 1 MVLQKRLDYGFNGYQVPYTPRATRSARKRCSFKKRAEDN---QMCAFDLLATVAGKLLLE 57
MV +++LD G+ P PRA RS R++ K+ D+ Q+CA DLLA +AGK+L E
Sbjct: 1 MVFKRKLDCLSVGFDFPNIPRAPRSCRRKVLNKRIDHDDDNTQICAIDLLA-LAGKILQE 59
Query: 58 KQCTPSSSNTPSDEDQSAVAKEIEQKAMQDENKQLKVETCDQGSCDRGFFVSDLVSQAHD 117
+ + +SSN +EI+Q+ +++ K +K E+ DQG+ VS
Sbjct: 60 SESSSASSN---------AFEEIKQEKVEN-CKTIKSESSDQGNS-----VSKPTYDIST 104
Query: 118 QKCSLKPPSCQQADAHPGFASVITTSDCSEGFGDQKLVNGKPKNEMGTLASKVEVGPSGY 177
+KC + SC + P V+ + S D K ++G ++VG
Sbjct: 105 EKCVVN--SCF---SFPDSDGVLERTPMS----DYKKIHGL-----------MDVG---- 140
Query: 178 MGYGNCKVEAETNKFMKDESHKTAKV-QLGTRADGCSFEDPLVWDGK-PPAVSSDSSAKA 235
C+ + N F + E+ T +V G D C+ ED + P +V K+
Sbjct: 141 -----CENKNVNNGFEQGEA--TDRVGDGGLVTDTCNLEDATALGLQFPKSVCVGGDLKS 193
Query: 236 PLCGDHSPHISFPASQDYVNVVSRDDDENSSGCTHPNTTKRSFRPAPRIGDRRIRKILAS 295
P D +P+ S+ ++ N+ +DDDE + +S+R +P I RRIRK ++S
Sbjct: 194 PSTLDMTPNGSYARHGNHTNLGRKDDDEKFYSYHKLSNKFKSYR-SPTI--RRIRKSMSS 250
Query: 296 KYWKVAPKLKDATLSNTVLMVSDGDLKTVYHNRNSYYRSIRSERNYPIKKRRLFNCSSVP 355
KYWK P KD S +D +KT+Y R S Y +R K+RR + SSV
Sbjct: 251 KYWKQVP--KDFGYSR-----ADVGVKTLYRKRKSCYGYNAWQREIIYKRRRSPDRSSV- 302
Query: 356 NYDRKIRSEGICVSPERCINGDVSALCAKMHEVTGASSSVAGSHTSFQSRDSHVKLRIKS 415
+ S+G G SS GS + + VKL IKS
Sbjct: 303 -----VTSDG------------------------GLSS---GSVSKLPKKGDTVKLSIKS 330
Query: 416 FRVPELFIELPETATVGSLKRRVMEAVNAILGGGLRVGVLLQGKKVKDDNKTLLQTGISH 475
FR+PELFIE+PETATVGSLKR VMEAV+ +L GG+RVGVL+ GKKV+D+ KTL QTGIS
Sbjct: 331 FRIPELFIEVPETATVGSLKRTVMEAVSVLLSGGIRVGVLMHGKKVRDERKTLSQTGISC 390
Query: 476 DNQKDVLGFSLEPKTSQTPPPLCSGDSPFMLPSNAPQPLARYPPAPGVVHQGTCDAVPEL 535
D D LGF+LEP S+ P PLCS D +P++ P L+ A ++ G A
Sbjct: 391 DENLDNLGFTLEPSPSKVPLPLCSEDP--AVPTD-PTSLSERSAASPMLDSGIPHAD--- 444
Query: 536 QMANAVNFIESDHDSAPSPTDMSIDKSTKDSKALVTVPAMSVEALAVVPVHRKSKRSEIV 595
+ ++ N ++S+ + P D+S+D+ + DSK LV +P + V+ALA+VP+++K KR+E+
Sbjct: 445 DVIDSRNIVDSNLELVPYQGDISVDEPSSDSKELVPLPELEVKALAIVPLNQKPKRTELA 504
Query: 596 QRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARI 655
QRR RRPFSV EVEALVQAVE+LGTGRWRDVKLRAF++A HRTYVDLKDKWKTLVHTA I
Sbjct: 505 QRRTRRPFSVTEVEALVQAVEELGTGRWRDVKLRAFEDADHRTYVDLKDKWKTLVHTASI 564
Query: 656 SPQQRRGEPVPQELLDRVLTAHAYWTQQQAKQQ 688
SPQQRRGEPVPQELLDRVL A+ YW+Q Q K Q
Sbjct: 565 SPQQRRGEPVPQELLDRVLRAYGYWSQHQGKHQ 597
>sp|Q9SNB9|TRP2_ARATH Telomere repeat-binding protein 2 OS=Arabidopsis thaliana GN=TRP2
PE=1 SV=1
Length = 553
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 250/476 (52%), Positives = 291/476 (61%), Gaps = 75/476 (15%)
Query: 226 AVSSDSSAKAPLCGDHSPHISFPASQDYVNVVSR-DDDENSSGCTHPNTTKRSFRPAPRI 284
++ S+SS + CG+ SP+ S+D VN+ SR DDDEN SG T RP PRI
Sbjct: 142 SIGSNSSTEVGACGNGSPN----ESRDDVNLFSRNDDDENFSGYIRTRMT----RPVPRI 193
Query: 285 GDRRIRKILASKYWKVAPKLKDATLSNTVLMVSDGDLKTVYHNRNSYYRSIRSERNYPIK 344
GDRRIRKILAS++WK K +NT D K Y ++ SYY +R+YPIK
Sbjct: 194 GDRRIRKILASRHWKGGSK------NNT-------DAKPWYCSKRSYYLH-HHQRSYPIK 239
Query: 345 KRRLFNCSSVPNYDRKIRSEGICVSPERCINGDVSALCAKMHEVTGASSSVAGSHTSFQS 404
KR+ F+ YD N D L K H+ + SS+ + SF S
Sbjct: 240 KRKYFDSV----YDS---------------NSDDYRLQGKTHKGSRTISSMKSRNASFVS 280
Query: 405 RDSHVKLRIKSFRVPELFIELPETATVGSLKRRVMEAVNAILGGGLRVGVLLQGKKVKDD 464
RD HVKLRIKSFRVPELF+E+PETATVGSLKR VMEAV ILG GLRVG+++QGKKV+DD
Sbjct: 281 RDHHVKLRIKSFRVPELFVEIPETATVGSLKRMVMEAVTTILGDGLRVGLMVQGKKVRDD 340
Query: 465 NKTLLQTGISHDNQK-DVLGFSLEPKTSQTPPPLCSGDSPFMLPSNAPQPLARYPPAPGV 523
KTLLQTGIS +N D LGFSLEP TP PL S
Sbjct: 341 GKTLLQTGISEENNHLDSLGFSLEPSLETTPQPLLSS----------------------Y 378
Query: 524 VHQGTCDAVPELQMANAVNFIESDHDSAPSPTDMSIDKSTKD-SKALVTVPAMSVEALAV 582
+ CD V L NA ++S H+ PSP D T D S+AL+ P S LA
Sbjct: 379 LSDHACDDV-TLCHDNA---LDSSHEPEPSPADSFGKLGTSDHSRALI--PVASAAMLAP 432
Query: 583 VPVHRKSKRSE---IVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTY 639
P +RK KR+E QRRIRRPFSV EVEALVQAVEKLGTGRWRDVK+RAF++A HRTY
Sbjct: 433 RPPNRKFKRTEQQLAAQRRIRRPFSVTEVEALVQAVEKLGTGRWRDVKVRAFEDADHRTY 492
Query: 640 VDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWTQQQAKQQFKQQPET 695
VDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVL AHAYW+Q Q + P T
Sbjct: 493 VDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLKAHAYWSQHLMHQLQTEPPST 548
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 1 MVLQKRLDYGFNGYQVPYTPRATRSARKRCSFKKRAE-DNQMCAFDLLATVAGKLLLEKQ 59
MV K L++G +GY++P RA RS RK+ ++K+ D++MCA DLLATVAG LLLE +
Sbjct: 1 MVSHKVLEFGDDGYKLPAQARAPRSLRKKRIYEKKIPGDDKMCAIDLLATVAGSLLLESK 60
>sp|Q8L7L8|TRP1_ARATH Telomere repeat-binding protein 1 OS=Arabidopsis thaliana GN=TRP1
PE=1 SV=2
Length = 578
Score = 360 bits (923), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 239/524 (45%), Positives = 295/524 (56%), Gaps = 88/524 (16%)
Query: 172 VGPSGYMGYGNCKVEAETNKFMKDESHKTAKVQLGTRADGCSFE---DPLVWDGKPPAV- 227
+ P G+ N KVE E + F S + Q+G + + D +V D +P V
Sbjct: 100 LSPCGFSSVINGKVENEVDGF--SYSGGSDACQVGNFSQDVKPDIDGDAVVLDARPNVVV 157
Query: 228 --SSDSSAKAPLCGDHSPHISFPASQDYVNVVSRDDDENSSGCTHPNTTKRSFRPAPRIG 285
S S + P G+ H +D VN+ SRDDDEN S HP TK S R PRIG
Sbjct: 158 SLGSSSRTEVPSIGNCVSH----GVRDDVNLFSRDDDENFSKYIHPRVTKHSPRTVPRIG 213
Query: 286 DRRIRKILASKYWKVAPKLKDATLSNTVLMVSDGDLKTVYHNRNSYYRSIRSERNYPIKK 345
DRRIRKILAS++WK + D RN Y + +R+YPIKK
Sbjct: 214 DRRIRKILASRHWKGGSRHSDTKPW-----------------RNYY---LHQQRSYPIKK 253
Query: 346 RRLFN-CSSVPNYDRKIRSEGICVSPERCINGDVSALCAKMHEVTGASSSVAGSHTSFQS 404
R+ F+ S D ++R+ KMH S G SF +
Sbjct: 254 RKNFDHISDSVTDDYRMRT--------------------KMHR-----GSRKGQGASFVA 288
Query: 405 RDSHVKLRIKSFRVPELFIELPETATVGSLKRRVMEAVNAILGGGLRVGVLLQGKKVKDD 464
DSHVKLRIKSFRVPELFIE+PETATVGSLKR VMEAV+ +L G RVG+++QGKKV+DD
Sbjct: 289 SDSHVKLRIKSFRVPELFIEIPETATVGSLKRMVMEAVSTLLSDGHRVGLMVQGKKVRDD 348
Query: 465 NKTLLQTGISHDNQK-DVLGFSLEPKTSQTPPPLCSGDSPFMLPSNAPQPLARYPPAPGV 523
NKTL QTGIS DN D L FSLEP S PQ L +P
Sbjct: 349 NKTLHQTGISQDNSHLDSLDFSLEPS------------------SEMPQLLTSHP----- 385
Query: 524 VHQGTCDAVPELQMANAVNFIESDH-DSAPSPTD-MSIDKSTKDSKALVTVPAMSVEALA 581
+ + +P Q N +ESDH DSA P+D + + T+DSKA+++V + + +
Sbjct: 386 LGHACEELLPVCQATKIDNVLESDHHDSALFPSDSLGNNNVTEDSKAMISVALNELSSQS 445
Query: 582 VVPVHRKSKRSEIVQRRIRR----PFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHR 637
P + + + Q+ +R PFSVAEVEALVQAVEKLGTGRWRDVKL AF++A HR
Sbjct: 446 QPPSRKSRRSEQQQQQAAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLCAFEDADHR 505
Query: 638 TYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWT 681
TYVDLKDKWKTLVHTA+ISPQQRRGEPVPQELL+RVL AH YWT
Sbjct: 506 TYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVLNAHGYWT 549
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 8 DYGFNGYQVPYTPRATRSARKRCSFKKRA--EDNQMCAFDLLATVAGKLLLE 57
++G+ Y VP RA RSARKR S +KR ED+ MCA DLLATVAG L E
Sbjct: 9 EFGYASYLVPSNARAPRSARKRRSIEKRISKEDDNMCAIDLLATVAGHLSFE 60
>sp|Q9LL45|TBP1_ORYSJ Telomere-binding protein 1 OS=Oryza sativa subsp. japonica GN=TBP1
PE=1 SV=2
Length = 633
Score = 264 bits (675), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/280 (53%), Positives = 182/280 (65%), Gaps = 12/280 (4%)
Query: 409 VKLRIKSFRVPELFIELPETATVGSLKRRVMEAVNAILGGGLRVGVLLQGKKVKDDNKTL 468
VKL IKSF +PEL IE+PE ATVGSLK+ V +AV I+ GLRVG+LLQGK +++DNKTL
Sbjct: 351 VKLTIKSFNIPELLIEIPENATVGSLKKTVSDAVTTIIERGLRVGILLQGKNIQNDNKTL 410
Query: 469 LQTGISHDNQKDVLGFSLEPKTSQTPPPLCSGDSPFMLPSNAPQPLARYPPAPGVVHQGT 528
Q GI + + +GF+LE + Q P ++P A V
Sbjct: 411 RQAGICRGKKLNDIGFTLECEAGQDSHP------GVIVPEEMDFVGASVVDKSATVK--- 461
Query: 529 CDAVPELQ--MANAVNFIESDHDSAPSPTDMSIDKSTKDSKALVTVPAMSVEALAVVPVH 586
C+ E Q M + SD S P + S +++ S+A+V + ALA VP+
Sbjct: 462 CEEPAENQQLMQDFPGCSLSDPGSVDYPVEWSTQETSASSQAIVPFADPNSLALANVPLS 521
Query: 587 RKSKRSEIVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKW 646
R SKR + QRRIRRPF+VAEVE LV+AVE LGTGRWRDVK RAF+N HRTYVDLKDKW
Sbjct: 522 R-SKRPDFGQRRIRRPFTVAEVELLVEAVEHLGTGRWRDVKFRAFENVHHRTYVDLKDKW 580
Query: 647 KTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWTQQQAK 686
KTLVHTA I+PQQRRG PVPQELLDRVL A AYW++QQAK
Sbjct: 581 KTLVHTASIAPQQRRGAPVPQELLDRVLAAQAYWSEQQAK 620
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 147/327 (44%), Gaps = 53/327 (16%)
Query: 1 MVLQKRLDYGFNGYQVPYTPR-ATRSARKRCSFKKRAEDNQMCAFDLLATVAGKLLLEK- 58
MVLQKRLDYG +G++ P PR AT + KR + R QM A DLLAT A KLL ++
Sbjct: 1 MVLQKRLDYGSHGHRAPIKPRVATLAPVKRST---RIRKKQMYALDLLATAAEKLLADQD 57
Query: 59 --QCTPSSSNTPSDEDQSAVAKEIEQKAMQDENKQLKVETCDQGSCDRGFF-VSDLVSQA 115
P+ + TP S + EQ + + V+ D C G + + QA
Sbjct: 58 NLSSGPNINETPEGYVTSMKPVKAEQFDEAFPLRSVAVKKDDCKGCTVGCAGICGFLRQA 117
Query: 116 HDQKCSLKPPSCQQ-AD-------AHPGFAS----VITTSDCSEGFGDQKLVNGKPKNEM 163
+ C + S Q AD A P + V + C GFG +
Sbjct: 118 N--MCLAENSSTQNLADSVLESLTAKPDVLAKDSFVSSKKSCRLGFG------------L 163
Query: 164 GTLASKVEVGPSGYMGYGNCKVEAETNKFMKDESHKTAKVQLGTRADG-----CSFEDPL 218
GT+ Y G C+ + + +K + H+ + ++ D C+ + +
Sbjct: 164 GTIPE--------YGSVGVCQPWSTRSAEVK-QVHRARPTAIRSQEDSDAAALCALVETM 214
Query: 219 VWDGKPPA-VSSDSSAKAPLCGDHSPHISFPASQDYV-NVVSRDDDENSSGCTHPNTT-- 274
D KP A SS S++ +CG H S P+ V + RDDDENSSGC HP+T+
Sbjct: 215 DLDTKPLAEASSGSNSGVHICGPDRGHNSHPSCLAKVQHAADRDDDENSSGCVHPSTSGN 274
Query: 275 KRSFRPAPRIGDRRIRKILASKYWKVA 301
R + P IGDRRIR++ AS+ K A
Sbjct: 275 NRGYIPH-YIGDRRIRRLFASRLRKAA 300
>sp|Q9M347|TRP6_ARATH Telomere repeat-binding protein 6 OS=Arabidopsis thaliana GN=TRP6
PE=1 SV=1
Length = 400
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 94/107 (87%), Gaps = 1/107 (0%)
Query: 576 SVEALAVVPVHRK-SKRSEIVQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNA 634
+V A +VVPV K + + E+VQRRIRRPF+V+EVEALVQAVE+LGTGRWRDVK AF++
Sbjct: 290 AVAAKSVVPVRMKPAWQPEMVQRRIRRPFTVSEVEALVQAVERLGTGRWRDVKSHAFNHV 349
Query: 635 KHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWT 681
HRTYVDLKDKWKTLVHTA+IS +QRRGEPVPQ+LLDRVL AHA+W+
Sbjct: 350 NHRTYVDLKDKWKTLVHTAKISARQRRGEPVPQDLLDRVLAAHAFWS 396
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 89/162 (54%), Gaps = 21/162 (12%)
Query: 340 NYPIKKRRLFNCSSVPNYDRKI---RSEGICVSPERCINGDVSALCAKMHEVTGASSSVA 396
N PI + F+ S + RK+ + G C+S E M+ + +
Sbjct: 111 NSPITQEENFDSRSKIDSKRKVSHLKERGSCISQE----------SQNMYPL--KKRKLF 158
Query: 397 GSHTSFQSRDS--HVKLRIKSFRVPELFIELPETATVGSLKRRVMEAVNAILGGGLRVGV 454
+ S +S D+ VK IKS + EL +++PE+ATVGSLK V+EAV IL GGL +GV
Sbjct: 159 YQNHSSESHDTPCTVKFGIKSLNISELLVDVPESATVGSLKLAVLEAVTQILKGGLNIGV 218
Query: 455 LLQGKKVKDDNKTLLQTGISHDNQKD----VLGFSLEPKTSQ 492
L QGK + DD+KTLLQ GI +D+ D LGF LEP+ S+
Sbjct: 219 LFQGKTIVDDSKTLLQIGIPYDDDDDENLGSLGFMLEPQKSE 260
Score = 36.2 bits (82), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 7 LDYGFNGYQVPYTPRATRSARKRCSFKKRAEDNQMCAFDLLATVAGKLLLEKQ 59
+D G + YQ+P PRA RS R R + + Q F++LA VAG+ E++
Sbjct: 2 VDCGVDIYQLPVVPRACRSPRGR---RLKIMRKQRSEFEVLAQVAGRFSGERK 51
>sp|F4IEY4|TRB5_ARATH Telomere repeat-binding factor 5 OS=Arabidopsis thaliana
GN=At1g72740 PE=2 SV=1
Length = 287
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 603 FSVAEVEALVQAVEKLGTGRWRDVKLR---AFDNAKHRTYVDLKDKWKTL 649
++ E EAL+ + K G G+W+++ LR D HR+ +DLKDKW+ L
Sbjct: 8 WTAEEEEALLAGIRKHGPGKWKNI-LRDPEFADQLIHRSNIDLKDKWRNL 56
>sp|F4I7L1|TRB4_ARATH Telomere repeat-binding factor 4 OS=Arabidopsis thaliana
GN=At1g17520 PE=2 SV=2
Length = 296
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 4/50 (8%)
Query: 603 FSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKH---RTYVDLKDKWKTL 649
++ E EAL+ V K G G+W+++ LR + A+ R+ +DLKDKW+ L
Sbjct: 8 WTAEEEEALLAGVRKHGPGKWKNI-LRDPELAEQLSSRSNIDLKDKWRNL 56
>sp|Q9YGL6|PALM_CHICK Paralemmin-1 OS=Gallus gallus GN=PALM PE=1 SV=1
Length = 386
Score = 37.4 bits (85), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 177 YMGYGNCKVEAETNKFMKDESHKTAKVQLGTRADGCSFEDPLVWDGKPPAVSSDSSAKAP 236
+MGY N + E ET K + E T K +L D S +P D PP ++ A AP
Sbjct: 290 FMGYQNVEDENETKKVLGLEG--TIKAELVVIEDAESKAEPEGKDHAPPNGTALEPAAAP 347
Query: 237 LCGDHSPHISFPAS 250
L GD P P +
Sbjct: 348 LQGDEVPGGQKPGT 361
>sp|Q91YP3|DEOC_MOUSE Putative deoxyribose-phosphate aldolase OS=Mus musculus GN=Dera
PE=2 SV=1
Length = 318
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 21/142 (14%)
Query: 278 FRPAPRIGDRRIRKILASKYWKVAPKLKDATLSNTVLMVSDGDLKTVYHNRNSYYRSIRS 337
R A +I RR K K W+ A LK T + + D V R Y
Sbjct: 26 LRRAQQIQARRSVK----KEWQAAWLLKAVTFIDLTTLSGDDTFSNV--QRLCY------ 73
Query: 338 ERNYPIKKRRLFNCSSVPNYDRKIRSEGICVSPERCINGDVSALCAKMHEVTGASSSVAG 397
+ YPI+ L ++ D+ I + +CV P R + V AL A G S VA
Sbjct: 74 KAKYPIRADLL---KALNMDDKGITTAAVCVYPARVCDA-VKALKA-----AGCSIPVAS 124
Query: 398 SHTSFQSRDSHVKLRIKSFRVP 419
T F + +H+K R++ R+
Sbjct: 125 VATGFPAGQTHLKTRLEEIRLA 146
>sp|Q9M2X3|TRB3_ARATH Telomere repeat-binding factor 3 OS=Arabidopsis thaliana GN=TRB3
PE=1 SV=1
Length = 295
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 603 FSVAEVEALVQAVEKLGTGRWRDVKLRAFDNA--KHRTYVDLKDKWKTLVHTA 653
++ E AL V K GTG+WR + + K R+ VDLKDKW+ + TA
Sbjct: 8 WTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60
>sp|Q61595|KTN1_MOUSE Kinectin OS=Mus musculus GN=Ktn1 PE=1 SV=1
Length = 1327
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 98/266 (36%), Gaps = 39/266 (14%)
Query: 152 QKLVNGKPKNEMGTLASKVEVGPSGYMGYGNCKVEAETNKFM--------KDESHKTAKV 203
Q L+ GK + ++ ++ + +E G G G C T +F KD K +V
Sbjct: 869 QNLLRGKEE-QVNSMKAALEDRDRGLTGRGTCAQVCSTPQFEELESVLKEKDNEIKRIEV 927
Query: 204 QL-GTRADGCSFEDPLVWDGKPPAVSSDSSAKAPLCGDHSPHISFPASQDYVNVVSRDDD 262
+L T +D + L + K L SFP+ ++ V+S +
Sbjct: 928 KLKDTESDVSKMSELL-----KEVQEENKFLKCQLSHQKHQQASFPSQEELQTVISEKEK 982
Query: 263 ENSSGCTHPNTTKRSFRPAPRIGDRRIRKILASKYWKVAPKLKDATLSNTVLMVSDGDLK 322
E + C + K + R+ L K W+ L++T M+ D K
Sbjct: 983 EITDLCNELESLKNAVE-----HQRKKNNDLREKNWEAME-----ALASTEKMLQDRVNK 1032
Query: 323 TVYHNRNSYYRSIRSERNYPIKKRRLFNCSSVP---NYDRKIRSEGICVSPERCING--D 377
T R + +I E +K RLF SVP NY +R G + C+ G D
Sbjct: 1033 T-SKERRQHVEAIELESKDLLK--RLFPTVSVPSNLNYSEWLR--GFEKKAKACVAGTSD 1087
Query: 378 VSALCAKMHEVTGASSSVAGSHTSFQ 403
A+ H + AS HT Q
Sbjct: 1088 AEAVKVLEHRLKEASE----MHTLLQ 1109
>sp|Q8C0V1|CCD79_MOUSE Coiled-coil domain-containing protein 79 OS=Mus musculus GN=Ccdc79
PE=1 SV=1
Length = 768
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 565 DSKALVTVPAMSVEALAVVPVHRKSKRSEI-------VQRRIRRPFSVAEVEALVQAVEK 617
DSK L P + +AL +RS + +RRIR+ F+ EV L V+
Sbjct: 673 DSKKL---PGLEAQALNTSIPEAMERRSPVPGQSGLHKKRRIRKDFTKEEVNYLFHGVKT 729
Query: 618 LGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLV 650
+G W + L +F K R VDL K+ L+
Sbjct: 730 MG-NHWNSI-LWSFPFQKGRRAVDLAHKYHRLI 760
>sp|Q02457|TBF1_YEAST Protein TBF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TBF1 PE=1 SV=2
Length = 562
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 19/110 (17%)
Query: 598 RIRRPFSVAEVEALVQAVEKLGTGRWRDVKL-----RAFDNAKHRTYVDLKDK---WKTL 649
+ +R +S E EALV+ ++++G + + L + +N K+RT V LKDK WK
Sbjct: 407 KAKRTWSKEEEEALVEGLKEVGPSWSKILDLYGPGGKITENLKNRTQVQLKDKARNWKL- 465
Query: 650 VHTARISPQQRRGEPVPQELLDRVLTAHAYWTQQQAKQQFKQQPETCLLL 699
+ G+P+P L+ + +AK++F Q P + ++
Sbjct: 466 -------QYLKSGKPLPDYLIKVTGNLEKIY---KAKKKFSQSPNSSTIM 505
>sp|Q80YC5|FA12_MOUSE Coagulation factor XII OS=Mus musculus GN=F12 PE=2 SV=2
Length = 597
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 10/83 (12%)
Query: 293 LASKYWKVAPKLKDATLSNTVLMVSDGDLKTVYHNRNSYYRSIRSERNYPIKKRRLFN-- 350
L++ WK + K KDA TV++ DG L H Y+R + + I KRR +
Sbjct: 18 LSAPPWKDSKKFKDAPDGPTVVLTVDGRL---CHFPFQYHRQLHHKC---IHKRRPGSRP 71
Query: 351 -CSSVPNYDRKIRSEGICVSPER 372
C++ PN+D + G C+ P++
Sbjct: 72 WCATTPNFDED-QQWGYCLEPKK 93
>sp|Q9FJW5|TRB2_ARATH Telomere repeat-binding factor 2 OS=Arabidopsis thaliana GN=TRB2
PE=1 SV=1
Length = 299
Score = 34.3 bits (77), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Query: 607 EVEALVQAVEKLGTGRWR----DVKLRAFDNAKHRTYVDLKDKWKTLVHTA 653
E AL V K GTG+WR D + K R+ VDLKDKW+ + TA
Sbjct: 12 EEAALKAGVLKHGTGKWRTILSDTEFSLI--LKSRSNVDLKDKWRNISVTA 60
>sp|Q9PU53|TERF2_CHICK Telomeric repeat-binding factor 2 OS=Gallus gallus GN=TERF2 PE=1
SV=2
Length = 718
Score = 33.9 bits (76), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 603 FSVAEVEALVQAVEKLGTGRWRDVKLR-AFDNAKHRTYVDLKDKWKTL 649
++V E E + V K G GRW+ + + F N RT V +KD+++T+
Sbjct: 668 WTVQESEWIKDGVRKYGEGRWKTISEKYPFQN---RTSVQIKDRYRTM 712
>sp|Q3T0V9|DEOC_BOVIN Putative deoxyribose-phosphate aldolase OS=Bos taurus GN=DERA PE=2
SV=1
Length = 318
Score = 33.9 bits (76), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 278 FRPAPRIGDRRIRKILASKYWKVAPKLKDATLSNTVLMVSDGDLKTVYHNRNSYYRSIRS 337
R A +I RR K K W+ A LK T + + D + R Y
Sbjct: 26 LRRAEQIQARRPVK----KEWQAAWLLKAVTCIDLTTLSGDDTASNI--QRLCY------ 73
Query: 338 ERNYPIKKRRLFNCSSVPNYDRKIRSEGICVSPERCINGDVSALCAKMHEVTGASSSVAG 397
+ YPI++ L ++ +D+ I + +CV P R + V AL A G VA
Sbjct: 74 KAKYPIREDLL---KALNMHDKGITTAAVCVYPARVCDA-VRALKA-----AGCDIPVAS 124
Query: 398 SHTSFQSRDSHVKLRIKSFRV 418
T F + +H+K R++ R+
Sbjct: 125 VATGFPAAQTHLKTRLEEIRL 145
>sp|P70371|TERF1_MOUSE Telomeric repeat-binding factor 1 OS=Mus musculus GN=Terf1 PE=1
SV=1
Length = 421
Score = 32.7 bits (73), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 597 RRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARIS 656
RR R+ + E L V+K G G W K+ + +RT V LKD+W+T+ IS
Sbjct: 364 RRKRQTWLWEEDRILKCGVKKYGEGNW--AKILSHYKFNNRTSVMLKDRWRTMKRLKLIS 421
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 260,800,016
Number of Sequences: 539616
Number of extensions: 11137836
Number of successful extensions: 31783
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 31710
Number of HSP's gapped (non-prelim): 61
length of query: 699
length of database: 191,569,459
effective HSP length: 125
effective length of query: 574
effective length of database: 124,117,459
effective search space: 71243421466
effective search space used: 71243421466
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)