Query 042388
Match_columns 567
No_of_seqs 259 out of 1400
Neff 6.0
Searched_HMMs 13730
Date Mon Mar 25 09:38:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042388.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/042388hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2f48a1 c.89.1.1 (A:4-553) Pyr 100.0 1E-145 7E-150 1197.8 44.9 534 22-557 1-550 (550)
2 d4pfka_ c.89.1.1 (A:) ATP-depe 100.0 9.9E-75 7.2E-79 599.7 33.9 301 89-494 1-302 (319)
3 d1pfka_ c.89.1.1 (A:) ATP-depe 100.0 5.2E-74 3.8E-78 594.4 34.9 300 89-493 2-302 (320)
4 d1z0sa1 e.52.1.1 (A:1-249) Ino 81.3 0.3 2.2E-05 46.2 2.4 32 183-220 39-70 (249)
5 d1rrma_ e.22.1.2 (A:) Lactalde 80.0 1.4 0.0001 43.4 7.1 60 168-227 72-146 (385)
6 d1jq5a_ e.22.1.2 (A:) Glycerol 79.0 1.8 0.00013 42.2 7.5 53 168-225 70-122 (366)
7 d2b8na1 c.118.1.1 (A:4-417) Pu 78.3 5.7 0.00042 39.7 11.2 185 90-290 78-343 (414)
8 d1vlja_ e.22.1.2 (A:) NADH-dep 78.3 1.7 0.00012 43.0 7.1 58 168-225 77-147 (398)
9 d2qv7a1 e.52.1.2 (A:1-312) Dia 77.5 0.98 7.1E-05 42.8 4.9 62 170-239 45-106 (312)
10 d2bona1 e.52.1.2 (A:5-299) Lip 76.7 1.9 0.00014 40.3 6.7 87 171-271 41-129 (295)
11 d1u0ta_ e.52.1.1 (A:) Inorgani 76.3 0.83 6.1E-05 44.1 3.9 54 181-251 69-124 (302)
12 d1o2da_ e.22.1.2 (A:) Alcohol 76.2 1.9 0.00014 42.0 6.8 60 168-227 71-143 (359)
13 d1dbqa_ c.93.1.1 (A:) Purine r 75.5 18 0.0013 32.0 13.1 90 90-222 1-90 (282)
14 d1gsoa2 c.30.1.1 (A:-2-103) Gl 75.0 2.2 0.00016 34.7 5.7 93 90-217 3-95 (105)
15 d2d6fa2 c.88.1.1 (A:84-435) Gl 71.7 3.4 0.00025 40.3 7.3 61 168-230 66-129 (352)
16 d1oj7a_ e.22.1.2 (A:) Hypothet 63.5 5.3 0.00039 39.1 6.8 54 168-221 73-142 (390)
17 d1s1ma1 c.23.16.1 (A:287-544) 61.6 2.2 0.00016 40.2 3.2 60 182-259 56-117 (258)
18 d1jkxa_ c.65.1.1 (A:) Glycinam 52.3 16 0.0011 32.5 7.4 87 90-192 1-88 (209)
19 d2a84a1 c.26.1.4 (A:3-288) Pan 48.7 10 0.00076 35.8 5.8 40 251-290 21-62 (286)
20 d1byka_ c.93.1.1 (A:) Trehalos 48.3 35 0.0026 29.9 9.4 69 89-195 2-70 (255)
21 d1ujna_ e.22.1.1 (A:) Dehydroq 48.3 13 0.00092 35.7 6.5 113 167-317 65-180 (347)
22 d1vcoa1 c.23.16.1 (A:298-547) 47.3 3 0.00022 39.1 1.4 60 182-259 57-118 (250)
23 d1meoa_ c.65.1.1 (A:) Glycinam 40.8 32 0.0023 30.2 7.6 88 91-194 2-90 (205)
24 d1zq1a2 c.88.1.1 (A:76-438) Gl 40.0 22 0.0016 34.4 6.8 61 168-230 75-139 (363)
25 d1jyea_ c.93.1.1 (A:) Lac-repr 38.6 91 0.0066 27.2 10.7 86 91-218 2-87 (271)
26 d4pgaa_ c.88.1.1 (A:) Glutamin 38.3 83 0.006 29.6 10.7 61 168-230 64-128 (330)
27 d1o7ja_ c.88.1.1 (A:) Asparagi 37.4 1.1E+02 0.0077 28.6 11.3 61 168-230 64-128 (325)
28 d1wsaa_ c.88.1.1 (A:) Asparagi 35.2 78 0.0057 29.7 10.0 61 168-230 62-126 (328)
29 d1sg6a_ e.22.1.1 (A:) Dehydroq 35.0 30 0.0022 33.5 7.0 110 168-315 82-196 (389)
30 d1ihoa_ c.26.1.4 (A:) Pantothe 34.9 18 0.0013 33.9 5.0 42 250-291 12-54 (282)
31 d1vdra_ c.71.1.1 (A:) Dihydrof 34.8 11 0.00078 32.1 3.0 54 171-231 80-133 (157)
32 d1nnsa_ c.88.1.1 (A:) Asparagi 33.7 1.2E+02 0.0091 28.1 11.2 61 168-230 62-124 (326)
33 d8abpa_ c.93.1.1 (A:) L-arabin 33.6 1.5E+02 0.011 25.9 16.7 92 90-224 2-93 (305)
34 d1kq3a_ e.22.1.2 (A:) Glycerol 33.4 20 0.0014 34.1 5.1 51 169-225 70-120 (364)
35 d2fvya1 c.93.1.1 (A:2-306) Gal 32.5 1.5E+02 0.011 25.5 12.2 93 90-223 2-94 (305)
36 d1nhpa2 c.3.1.5 (A:120-242) NA 31.9 26 0.0019 28.0 4.9 50 166-218 12-61 (123)
37 d1i60a_ c.1.15.4 (A:) Hypothet 30.5 1.3E+02 0.0097 26.1 10.4 48 171-218 15-67 (278)
38 d1xmpa_ c.23.8.1 (A:) N5-CAIR 29.0 31 0.0023 29.5 5.1 46 168-220 41-87 (155)
39 d1weha_ c.129.1.1 (A:) Hypothe 28.4 1.1E+02 0.0082 25.8 8.9 58 158-221 6-66 (171)
40 d1tjya_ c.93.1.1 (A:) AI-2 rec 28.2 1.3E+02 0.0094 26.0 9.8 97 88-225 2-98 (316)
41 d1agxa_ c.88.1.1 (A:) Glutamin 27.5 55 0.004 30.8 7.3 61 168-230 63-127 (331)
42 d1uf3a_ d.159.1.6 (A:) Hypothe 26.6 54 0.0039 27.3 6.4 51 168-220 17-71 (228)
43 d1nksa_ c.37.1.1 (A:) Adenylat 26.0 69 0.005 25.7 6.9 81 187-267 4-92 (194)
44 d2ij9a1 c.73.1.3 (A:1-219) Uri 25.8 63 0.0046 28.0 6.9 87 95-192 106-201 (219)
45 d1weka_ c.129.1.1 (A:) Hypothe 24.1 1.1E+02 0.0078 26.8 8.2 68 156-229 36-106 (208)
46 d1qopa_ c.1.2.4 (A:) Trp synth 23.7 59 0.0043 29.8 6.4 49 172-220 4-54 (267)
47 d1ccwa_ c.23.6.1 (A:) Glutamat 23.7 53 0.0038 27.0 5.5 106 89-211 3-113 (137)
48 d1ig3a2 c.100.1.1 (A:10-178) T 23.5 62 0.0045 27.8 6.1 71 142-218 86-167 (169)
49 d1a9xa3 c.30.1.1 (A:1-127) Car 23.2 1.2E+02 0.0087 24.7 7.6 109 86-219 4-119 (127)
50 d1ve1a1 c.79.1.1 (A:1-302) O-a 22.4 60 0.0043 29.5 6.2 44 175-220 156-201 (302)
51 d2ocda1 c.88.1.1 (A:2-337) Asp 22.4 2.8E+02 0.021 25.5 11.8 62 168-230 63-126 (336)
52 d1u6ka1 c.127.1.1 (A:2-283) F4 21.7 88 0.0064 28.5 6.9 50 168-217 44-97 (282)
53 d2i4ra1 c.149.1.1 (A:4-79) V-t 21.3 39 0.0028 25.2 3.7 20 318-337 39-58 (76)
54 d1vp8a_ c.49.1.2 (A:) Hypothet 21.1 67 0.0048 28.1 5.7 48 167-220 16-63 (190)
55 d7reqb2 c.23.6.1 (B:476-638) M 20.3 55 0.004 27.7 5.1 14 88-101 34-47 (163)
56 d1qcza_ c.23.8.1 (A:) N5-CAIR 20.1 29 0.0021 30.0 3.0 48 167-221 40-88 (163)
57 d2yvta1 d.159.1.6 (A:4-260) Un 20.0 1.1E+02 0.0077 25.7 7.1 24 170-193 16-39 (257)
No 1
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]}
Probab=100.00 E-value=9.9e-146 Score=1197.84 Aligned_cols=534 Identities=49% Similarity=0.863 Sum_probs=512.2
Q ss_pred CHhhhhhcCCCCCCccccccc---cceecCCCCCCCCChhHHHhhCCcccCCCeeEEecCCcccccCCCCCcEEEEEecC
Q 042388 22 SELQTSRLNVSLPLPSVLKKT---FNVVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDPKACSMENKSLKIGVVLSG 98 (567)
Q Consensus 22 s~l~~~r~~~~p~lp~~l~~~---~~~~~~~~~~~~~~~~~i~~~fp~~~~~p~~~~~~~~~~~~~~~~~~~~IgIv~sG 98 (567)
|+||++|++|+|+||++|++. +++.+++++.+..|+++|+++||+||++|.++|.++++ .....+++||||||||
T Consensus 1 s~~q~~r~~~~p~lp~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~fp~~~~~p~~~~~~~~~--~~~~~~~~rIgIl~sG 78 (550)
T d2f48a1 1 SLFKQERQKYIPKLPNILKKDFNNISLVYGENTEAIQDRQALKEFFKNTYGLPIISFTEGES--SLSFSKALNIGIILSG 78 (550)
T ss_dssp CHHHHHHTTCCCCCCGGGGSCGGGEEEEECCCCCCSSCHHHHHHHTTTTTTCCCEEEEESCC--CCSCCSCCEEEEEEBS
T ss_pred CHhHHHHHhCCCCCChhHhCccceeeeccCCcccccCCHHHHHHHhHHhcCCceeeeccCCC--CCCcCCCCEEEEECcC
Confidence 899999999999999999865 56788999999999999999999999999999998862 4455678999999999
Q ss_pred CCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCChHHHHHHHHH
Q 042388 99 GQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEET 178 (567)
Q Consensus 99 G~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~~e~~~~~~~~ 178 (567)
|||||+||||+|+++++++.+++++||||++||+||+++++++|+++.++.|+|+|||+++||+|.++.+++++++++++
T Consensus 79 G~aPG~N~vI~gvv~~~~~~~~~~~v~G~~~G~~GL~~~~~~~L~~~~v~~~~~~GG~~l~~s~r~~~~~~e~~~~i~~~ 158 (550)
T d2f48a1 79 GPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYRNTGGFDIVSSGRTKIETEEHYNKALFV 158 (550)
T ss_dssp SCCTTHHHHHHHHHHHHHHHCTTCEEEEETTTTHHHHTTCEEEECHHHHHHHTTCCSSTTTCCBCCCCCSHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHhCCCCEEEEECcchHHhcCCCEEECCHHHHhhHHhCCCcEecCCCCCCCcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998888889999999999999999
Q ss_pred HHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhhc
Q 042388 179 AKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARST 258 (567)
Q Consensus 179 l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~~ae~I~ni~~da~S~ 258 (567)
|++++||+||+||||||+++|++|+|||++++++|+||||||||||||+++++|+|||||||+++++++|+||++||.|+
T Consensus 159 l~~~~Id~LviIGGd~S~~~a~~Lae~~~~~~~~i~vigvPKTIDNDl~~~~~d~s~GfdTA~~~~~~~i~~l~~da~S~ 238 (550)
T d2f48a1 159 AKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMST 238 (550)
T ss_dssp HHHTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCCEEEEEEEETTCCCCCSSCCCCEEHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEECChHHHHHHHHHHHHHHHhCCCccEEEecccccCCCCCccccccccHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred CCeeEEEEecCCCCcHHHHHhhhhcCCcEEEECCcchhhhcchHhHHHHHHHHHHHHHHcCCCeEEEEEeCCCCCCchHH
Q 042388 259 GKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEV 338 (567)
Q Consensus 259 ~k~~~fVevMGR~ag~LAL~~aLat~pnivlIpEe~~~~~~tL~~iv~~i~d~I~~R~~~gk~~gvIli~EGl~~~ipe~ 338 (567)
+++|||||+|||+||||||+||||||||+|||||++++++++|.+|+++||+.|++|+..|++|||||||||+++|+||+
T Consensus 239 ~~~~~~VevMGR~aG~lAl~~alat~a~~ilipE~~~~~~~~L~~i~~~i~~~I~kR~~~gk~~gvIvV~EGli~~ipe~ 318 (550)
T d2f48a1 239 KKYWHFVKLMGRSASHVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGLIEFIPEV 318 (550)
T ss_dssp CCCEEEEEECCTTSCHHHHHHHHHHCCSEECCHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCCEEEEEETTGGGTSHHH
T ss_pred ccceEEEEEecCCCcHHHHHHHHhcCCceEEecccccchhhhHHHHHHHHHHHHHHHHHcCCCcEEEEecCcccccchHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcCCcCC--------CcchhhhcchhhHHHHhhchHHHHHHh---hhcCCCCCCcccchhhhHHHHHHH
Q 042388 339 QQLIAELNEILAHDGVDQ--------DGAWKKKLKSQSQELFELFPKAIQEQL---LLERDPHGNVQVAKIETEKMLIQM 407 (567)
Q Consensus 339 ~~li~el~~~~~~~~~~~--------~g~~~~~ls~~~~~lf~~lp~~i~~ql---~~~rD~~Gn~~ls~i~te~lL~~l 407 (567)
+.||+|+|+++.+...+. ...+..+|+++++++|.+||.+||+|| +++||+|||+||++|+||++|+++
T Consensus 319 ~~Li~el~~~l~~~~~~~~~~~~~~~~~~~~~~ls~~~~~l~~~lp~~i~~qll~~~~~rD~~G~~~ls~I~~e~lLa~~ 398 (550)
T d2f48a1 319 KSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFELIKSILERDPHGNFNVSRVPTEKLFIEM 398 (550)
T ss_dssp HHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHSCHHHHHHHHTSCHHHHHHHHHHHHTCCTTCCCCCTTSCHHHHHHHH
T ss_pred HHHHHHHHHhhhhcccccccccchhhhhhhhhhcchhhhhhhhcccHHHHHHHhhcccccCCCCCeeeccccHHHHHHHH
Confidence 999999999987653211 123788999999999999999999999 568999999999999999999999
Q ss_pred HHHHHHHhhhcCCcCcccccceecCcccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEEecCCCCccceEEeccc
Q 042388 408 VETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTA 487 (567)
Q Consensus 408 V~~~L~~r~~~~~y~~~f~~~~~~~Gy~~R~~~PS~fD~~~a~~lG~~Av~li~~g~tG~mv~i~~l~~~~~~w~~~~vP 487 (567)
|+++|++++..+.|+++|++++|+|||+|||+.||+||+.|||+||+.|++++++|+||||++|+|++.++++|+++++|
T Consensus 399 V~~~L~~~~~~~~~~~~f~~~~h~~GYe~R~a~PS~fD~~~a~~lG~~Av~~~~~G~tG~M~~I~~l~~~~~~w~~~~iP 478 (550)
T d2f48a1 399 IQSRLNDMKKRGEYKGSFTPVDHFFGYEGRSAFPSNFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVP 478 (550)
T ss_dssp HHHHHHHHHTTTCCCSCCCEEEEEESHHHHTSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEECTTSCGGGCEEEEEE
T ss_pred HHHHHHHhhhhcccccceeeeecccccceeCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCCCCCCceeEECCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHhHHHHHHhcCCcccccchhhhccCCchhHHHHHhhccccccCceeCCccccccCCCC--CCCcceeEecC
Q 042388 488 LTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNA--NDINHTLKLEL 557 (567)
Q Consensus 488 L~~~~~~e~~~g~~~p~i~~~~v~l~~~~f~~~~~~r~~w~~~d~y~~pGpiq~~g~~~--~~~~~tl~~e~ 557 (567)
|++||++|+|.|+.+|||+|++|||+|++|++|+++|++|+++|+||+||||||+||.+ |.+|+||.||.
T Consensus 479 l~~~m~~e~r~g~~~~~i~k~~v~l~~~~f~~~~~~r~~w~~~d~y~~pGpiQ~~g~~~~~~~~~~tl~~e~ 550 (550)
T d2f48a1 479 LTMLMNMEERYGEKKPVIKKALVDLEGRPFKEFVKNRDKWALNNLYLYPGPVQYFGSSEIVDEITETLKLEL 550 (550)
T ss_dssp GGGGEEEEEETTEEEEEECCCCCCTTSHHHHHHHHHHHHHHHSCCCCCCCCCCCSSCHHHHTCCCHHHHHHT
T ss_pred HHHHhhHHHhcCCcCcceecceeCCCcHHHHHHHHHHHHHHhcCcCcCCCCcccCCchhhcccccchhcccC
Confidence 99999999999999999999999999999999999999999999999999999999987 99999999984
No 2
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=9.9e-75 Score=599.72 Aligned_cols=301 Identities=27% Similarity=0.377 Sum_probs=269.2
Q ss_pred CcEEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCC-CC
Q 042388 89 SLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDK-IE 167 (567)
Q Consensus 89 ~~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k-~~ 167 (567)
.||||||+|||||||+|++|+|+++++. ..+.+||||++||+||+++++++|++++++.|+++||+ +|||+|.+ ..
T Consensus 1 mkrIaIl~sGG~~pgiNa~i~~~v~~~~--~~~~~v~g~~~G~~Gl~~~~~~~l~~~~~~~~~~~gGt-~lgs~r~~~~~ 77 (319)
T d4pfka_ 1 MKRIGVLTSGGDSPGMNAAIRSVVRKAI--YHGVEVYGVYHGYAGLIAGNIKKLEVGDVGDIIHRGGT-ILYTARCPEFK 77 (319)
T ss_dssp CCEEEEEEESSCCTTHHHHHHHHHHHHH--HTTCEEEEESSHHHHHHTTCEEEECGGGGTTCTTCCSC-TTCCCCCTTSS
T ss_pred CCEEEEECcCCCcHHHHHHHHHHHHHHH--HCCCEEEEEccchHHhcCCCcccCCHHHHHHHHhcCcc-ccccCCCCccc
Confidence 4799999999999999999999999865 45789999999999999999999999999999999998 99999986 46
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHHHHHH
Q 042388 168 TPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEM 247 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~~ae~ 247 (567)
+++++++++++|++++||+||+||||||+++|++|+|+ .++||||||||||||+++| +|||||||+++++++
T Consensus 78 ~~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~L~~~------~~~vvgIPkTIDNDl~~td--~t~Gf~TA~~~~~~~ 149 (319)
T d4pfka_ 78 TEEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEH------GFPCVGVPGTIDNDIPGTD--FTIGFDTALNTVIDA 149 (319)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCSSCCCTTCS--SCBTHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHhccceEEEecCchHHHHHHHHHhc------cCceeeeeeeccCCcCCcc--ccccHHHHHHHHHHH
Confidence 78899999999999999999999999999999999986 5789999999999999988 599999999999999
Q ss_pred HHHHHHHHhhcCCeeEEEEecCCCCcHHHHHhhhhcCCcEEEECCcchhhhcchHhHHHHHHHHHHHHHHcCCCeEEEEE
Q 042388 248 IGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILI 327 (567)
Q Consensus 248 I~ni~~da~S~~k~~~fVevMGR~ag~LAL~~aLat~pnivlIpEe~~~~~~tL~~iv~~i~d~I~~R~~~gk~~gvIli 327 (567)
|+++..+|.|++ +|||||+|||+|||||++|||+++||+|||||+++. .+++++.|++|.+++++|++|||
T Consensus 150 i~~l~~~a~s~~-rv~ivEvMGR~aG~lA~~~~la~~a~~iliPE~~~~--------~~~~~~~i~~~~~~~k~~~ivvv 220 (319)
T d4pfka_ 150 IDKIRDTATSHE-RTYVIEVMGRHAGDIALWSGLAGGAETILIPEADYD--------MNDVIARLKRGHERGKKHSIIIV 220 (319)
T ss_dssp HHHHHHHHHHTT-CEEEEEECCSSCCHHHHHHHHHTTCSEEECTTSCCC--------HHHHHHHHHHHHHTTCSCEEEEE
T ss_pred HHHHHhhcccCc-ceEEEEecCCCCcHHHHHhhccCCCcEEEecCCCCC--------HHHHHHHHHHHHhhcCCeeEEEE
Confidence 999998888776 589999999999999999999999999999999873 34556677888889999999999
Q ss_pred eCCCCCCchHHHHHHHHHHHhhhcCCcCCCcchhhhcchhhHHHHhhchHHHHHHhhhcCCCCCCcccchhhhHHHHHHH
Q 042388 328 PEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQM 407 (567)
Q Consensus 328 ~EGl~~~ipe~~~li~el~~~~~~~~~~~~g~~~~~ls~~~~~lf~~lp~~i~~ql~~~rD~~Gn~~ls~i~te~lL~~l 407 (567)
+||+.... .+++.
T Consensus 221 sEG~~~~~-------------------------------------------------------------------~~~~~ 233 (319)
T d4pfka_ 221 AEGVGSGV-------------------------------------------------------------------DFGRQ 233 (319)
T ss_dssp ETTTCCHH-------------------------------------------------------------------HHHHH
T ss_pred ecccchhh-------------------------------------------------------------------hhhhh
Confidence 99986410 01122
Q ss_pred HHHHHHHhhhcCCcCcccccceecCcccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEEecCCCCccceEEeccc
Q 042388 408 VETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTA 487 (567)
Q Consensus 408 V~~~L~~r~~~~~y~~~f~~~~~~~Gy~~R~~~PS~fD~~~a~~lG~~Av~li~~g~tG~mv~i~~l~~~~~~w~~~~vP 487 (567)
+++++ .+++|...+||.|||+.||+||+.+|++||..|++++.+|.||+|+++++.+ +..+|
T Consensus 234 i~~~~-----------g~~~r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~g~sg~mv~i~~~~-------~~~vp 295 (319)
T d4pfka_ 234 IQEAT-----------GFETRVTVLGHVQRGGSPTAFDRVLASRLGARAVELLLEGKGGRCVGIQNNQ-------LVDHD 295 (319)
T ss_dssp HHHHH-----------CCCEEEEECGGGGGCSCCCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEETTE-------EEEEE
T ss_pred hhhhc-----------CceeEEeecCchhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeEEEEECCE-------EEEEc
Confidence 22221 3677889999999999999999999999999999999999999999999874 78899
Q ss_pred hHhHHHH
Q 042388 488 LTSLMDV 494 (567)
Q Consensus 488 L~~~~~~ 494 (567)
|.++++.
T Consensus 296 l~~v~~~ 302 (319)
T d4pfka_ 296 IAEALAN 302 (319)
T ss_dssp HHHHTTS
T ss_pred HHHHHhc
Confidence 9998764
No 3
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=5.2e-74 Score=594.39 Aligned_cols=300 Identities=28% Similarity=0.353 Sum_probs=267.9
Q ss_pred CcEEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCC-CC
Q 042388 89 SLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDK-IE 167 (567)
Q Consensus 89 ~~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k-~~ 167 (567)
.+|||||+|||||||+|++|+|+++++. +++.+||||++||+||+++++++|+++.++.++++||+ +|||+|++ +.
T Consensus 2 mkrIgIltsGG~~pg~Na~i~~~v~~~~--~~~~~v~g~~~G~~Gl~~~~~~~l~~~~v~~~~~~gGs-~lgt~R~~~~~ 78 (320)
T d1pfka_ 2 IKKIGVLTSGGDAPGMNAAIRGVVRSAL--TEGLEVMGIYDGYLGLYEDRMVQLDRYSVSDMINRGGT-FLGSARFPEFR 78 (320)
T ss_dssp CCEEEEEECSSCCTTHHHHHHHHHHHHH--HTTCEEEEESTHHHHHHTTCEEEECSGGGTTCTTCCSC-TTCCCCCGGGG
T ss_pred CceEEEEccCCCchHHHHHHHHHHHHHH--HCCCEEEEEeccHHHHcCCCeEeCCHHHHHHHHhcCCC-cccccCCCCCc
Confidence 4799999999999999999999999854 56889999999999999999999999999999999998 99999986 57
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHHHHHH
Q 042388 168 TPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEM 247 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~~ae~ 247 (567)
+++++++++++|++++||+||+||||||+++|+.|+|+ .++|||||||||||++++| +|||||||+++++++
T Consensus 79 ~~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~l~~~------~~~vigiPkTIDNDl~~td--~s~Gf~TA~~~~~~~ 150 (320)
T d1pfka_ 79 DENIRAVAIENLKKRGIDALVVIGGDGSYMGAMRLTEM------GFPCIGLPGTIDNDIKGTD--YTIGFFTALSTVVEA 150 (320)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCTTCCCTTCS--CCBTHHHHHHHHHHH
T ss_pred chhhhhhHHHHHHHcCCCEEEEeCCchHHHHHHHHHhc------ccceeeeeeeecCCCCCcC--CCCchHHHHHHHHHH
Confidence 88899999999999999999999999999999999986 5789999999999999988 599999999999999
Q ss_pred HHHHHHHHhhcCCeeEEEEecCCCCcHHHHHhhhhcCCcEEEECCcchhhhcchHhHHHHHHHHHHHHHHcCCCeEEEEE
Q 042388 248 IGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILI 327 (567)
Q Consensus 248 I~ni~~da~S~~k~~~fVevMGR~ag~LAL~~aLat~pnivlIpEe~~~~~~tL~~iv~~i~d~I~~R~~~gk~~gvIli 327 (567)
++++..++.|++ +|||||+|||+|||||++|||+++||++||||.++. ++ .+++.++++..++++|++|++
T Consensus 151 i~~l~~~a~s~~-rv~ivEvMGR~~G~la~~~ala~~a~~iliPE~~~~----~~----~~~~~i~~~~~~~~~~~iivv 221 (320)
T d1pfka_ 151 IDRLRDTSSSHQ-RISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFS----RE----DLVNEIKAGIAKGKKHAIVAI 221 (320)
T ss_dssp HHHHHHHHHHHT-CEEEEEECCTTCCHHHHHHHHHTTCSEEECTTSCCC----HH----HHHHHHHHHHHTTCSCEEEEE
T ss_pred HHHHhhhccCCC-cEEEEEeeccchhHHHHHhhhccCCceEecCCCCCC----HH----HHHHHHHHHHhcCCCcceEEe
Confidence 999998887775 599999999999999999999999999999999873 33 345566777788999999999
Q ss_pred eCCCCCCchHHHHHHHHHHHhhhcCCcCCCcchhhhcchhhHHHHhhchHHHHHHhhhcCCCCCCcccchhhhHHHHHHH
Q 042388 328 PEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQM 407 (567)
Q Consensus 328 ~EGl~~~ipe~~~li~el~~~~~~~~~~~~g~~~~~ls~~~~~lf~~lp~~i~~ql~~~rD~~Gn~~ls~i~te~lL~~l 407 (567)
+||+... .-+++.
T Consensus 222 sEg~~~~-------------------------------------------------------------------~~~~~~ 234 (320)
T d1pfka_ 222 TEHMCDV-------------------------------------------------------------------DELAHF 234 (320)
T ss_dssp ESSSSCH-------------------------------------------------------------------HHHHHH
T ss_pred ecccccc-------------------------------------------------------------------hhHHHH
Confidence 9998531 011233
Q ss_pred HHHHHHHhhhcCCcCcccccceecCcccccCCCCCHHHHHHHHHHHHHHHHHHHcCCCceEEEEecCCCCccceEEeccc
Q 042388 408 VETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTA 487 (567)
Q Consensus 408 V~~~L~~r~~~~~y~~~f~~~~~~~Gy~~R~~~PS~fD~~~a~~lG~~Av~li~~g~tG~mv~i~~l~~~~~~w~~~~vP 487 (567)
+++++ ..++|+..|||.|||+.||+||+.+|++||..|++++.+|++|+|+++++.+ +..+|
T Consensus 235 i~~~~-----------g~~~r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~G~~g~mvg~~~~~-------~~~~p 296 (320)
T d1pfka_ 235 IEKET-----------GRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQ-------LVHHD 296 (320)
T ss_dssp HHHHH-----------SSCEEEEECGGGGGCSCCCHHHHHHHHHHHHHHHHHHHHTCCSEEEEEETTE-------EEEEE
T ss_pred HHHHh-----------CcceeecccchhhcCCCCCHHHHHHHHHHHHHHHHHHHCCCCCeEEEEECCE-------EEEec
Confidence 33332 3567889999999999999999999999999999999999999999999875 78999
Q ss_pred hHhHHH
Q 042388 488 LTSLMD 493 (567)
Q Consensus 488 L~~~~~ 493 (567)
|.+++.
T Consensus 297 l~~~v~ 302 (320)
T d1pfka_ 297 IIDAIE 302 (320)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998764
No 4
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=81.30 E-value=0.3 Score=46.17 Aligned_cols=32 Identities=19% Similarity=0.327 Sum_probs=24.1
Q ss_pred CCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecc
Q 042388 183 DLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPK 220 (567)
Q Consensus 183 ~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPK 220 (567)
+.|.+|++|||||+-.|... +. . .++|+||-.
T Consensus 39 ~~D~vi~iGGDGT~L~a~~~---~~--~-~~PilGIn~ 70 (249)
T d1z0sa1 39 NFDFIVSVGGDGTILRILQK---LK--R-CPPIFGINT 70 (249)
T ss_dssp GSSEEEEEECHHHHHHHHTT---CS--S-CCCEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHH---hc--C-CCcEEEECc
Confidence 57889999999999877532 21 2 468999974
No 5
>d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]}
Probab=79.97 E-value=1.4 Score=43.36 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=47.8
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhc---------------CCCCccEEEecccCcCCCC
Q 042388 168 TPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRS---------------KDMKTRVIGCPKTIDGDLK 227 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~---------------~g~~i~VIgVPKTIDNDL~ 227 (567)
+.++.+++++.+++.+.|.+|-|||--+++.|..++-.... ..-.+++|.||-|--++-.
T Consensus 72 ~~~~v~~~~~~~~~~~~D~IiaiGGGS~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~lP~i~IPTtagTgse 146 (385)
T d1rrma_ 72 TITVVKEGLGVFQNSGADYLIAIGGGSPQDTCKAIGIISNNPEFADVRSLEGLSPTNKPSVPILAIPTTAGTAAE 146 (385)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHHHHCGGGTTSGGGSEECCCCSCCSCEEEEECSSSCCTT
T ss_pred CHHHHHHHhhhhhccCCCEEEecCCCchhhHHHHHHHHhcCCccchhhhhhccccccCCCCceEecccccccccc
Confidence 56889999999999999999999999999999888754322 1224789999977655544
No 6
>d1jq5a_ e.22.1.2 (A:) Glycerol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=79.02 E-value=1.8 Score=42.21 Aligned_cols=53 Identities=15% Similarity=0.301 Sum_probs=44.4
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCC
Q 042388 168 TPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGD 225 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDND 225 (567)
+.+..+++++.+++.+.|.+|-+||--+++.|..+|... ++++|.||-|--.+
T Consensus 70 ~~~~v~~~~~~~~~~~~D~IiavGGGs~iD~aK~iA~~~-----~~p~i~IPTT~gtg 122 (366)
T d1jq5a_ 70 SRNEVERIANIARKAEAAIVIGVGGGKTLDTAKAVADEL-----DAYIVIVPTAASTD 122 (366)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHH-----TCEEEEEESSCCSS
T ss_pred CHHHHHHHHHHhhccCCcEEEEecCCccccchheeeecc-----cceeeehhhhhhhh
Confidence 457788999999999999999999999999888887542 57899999885443
No 7
>d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]}
Probab=78.32 E-value=5.7 Score=39.69 Aligned_cols=185 Identities=15% Similarity=0.259 Sum_probs=111.3
Q ss_pred cEEEEEecCCCCchhhHHHHH--HHHHHHHhcCCCEEEEEe-CCcccccCCCE--EEcCcc---------------cccc
Q 042388 90 LKIGVVLSGGQAPGGHNVISG--IFDYLQERTNGSKLYGFK-GGPAGIMKCKY--VELSTE---------------YIYP 149 (567)
Q Consensus 90 ~~IgIv~sGG~aPG~nnvI~g--l~~~l~~~~~~~~v~Gf~-~G~~GLl~~~~--~eLt~~---------------~v~~ 149 (567)
.+|=|+.+|.|.|.-+++.++ +.+.++...++..|+..+ +|-.-|+.-=. +.|.+. +|..
T Consensus 78 ~~i~v~~a~HP~Pd~~s~~Aa~~il~~~~~~~~~Dlvl~LISGGgSALl~~P~~gitL~dk~~~~~~Ll~sGA~I~eiN~ 157 (414)
T d2b8na1 78 DDFEIYEAGHPVPDENTIKTTRRVLELVDQLNENDTVLFLLSGGGSSLFELPLEGVSLEEIQKLTSALLKSGASIEEINT 157 (414)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHHHSSCCTTCEEEEEECTTHHHHSCCBCTTCCHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CCeEEEECCCCCCCHHHHHHHHHHHHHHhcCCCCCeEEEEeeCCcccchhcCCCCCCHHHHHHHHHHHHhCCCCHHHHHH
Confidence 467789999999999999976 888887777777776655 56555664221 222211 1111
Q ss_pred ccc-----cCC-----------------------cccccccCCCCCChHHHHHHHHHHHHcCCC----------------
Q 042388 150 YRN-----QGG-----------------------FDMICSGRDKIETPEQFKQAEETAKKLDLD---------------- 185 (567)
Q Consensus 150 ~~n-----~GG-----------------------~~~LGS~R~k~~~~e~~~~~~~~l~~~~id---------------- 185 (567)
.|. .|| -++|+|+-+-+ ++..++.+++.++++++.
T Consensus 158 VRk~lS~iKGG~La~~a~pa~v~sLilSDV~GDdl~~IaSGPTvp-d~~t~~da~~il~~y~l~~p~~v~~~l~~~~~~~ 236 (414)
T d2b8na1 158 VRKHLSQVKGGRFAERVFPAKVVALVLSDVLGDRLDVIASGPAWP-DSSTSEDALKVLEKYGIETSESVKRAILQETPKH 236 (414)
T ss_dssp HHHTTBSSTTTHHHHHHTTSEEEEEEECCSTTCCTTTGGGCTTSC-CCCCHHHHHHHHHHTTCCCCHHHHHHHTSCCCSC
T ss_pred HHHHHHhccccHHHHHhccCceEEEEEecCCCCCchheecCCcCC-CCCCHHHHHHHHHHcCCCCChHHHHhhcccCCcc
Confidence 111 133 12567776544 345578888888888753
Q ss_pred ----EEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhhcCCe
Q 042388 186 ----GLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKY 261 (567)
Q Consensus 186 ----~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~~ae~I~ni~~da~S~~k~ 261 (567)
-..+||.+...-.|+ +++.++.|++ ++-+..++++|.. + +.+.+++++.++...-....+-
T Consensus 237 ~~~v~~~ii~~n~~al~aa--~~~a~~~G~~--~~~~~~~l~Gea~--~---------va~~~a~~~~~~~~~~~~~~~p 301 (414)
T d2b8na1 237 LSNVEIHLIGNVQKVCDEA--KSLAKEKGFN--AEIITTSLDCEAR--E---------AGRFIASIMKEVKFKDRPLKKP 301 (414)
T ss_dssp CSSEEEEEEECHHHHHHHH--HHHHHHTTCE--EEEEEEEECSBHH--H---------HHHHHHHHHHHHHHHCCSSCSS
T ss_pred ccccceEEecCHHHHHHHH--HHHHHHcCCc--eEEecccccCcHH--H---------HHHHHHHHHHHHHhcCCCCCCC
Confidence 356777766544332 3445567875 4456677888865 3 5667777776665444433333
Q ss_pred eEEE---Ee--------cCCCCcHHHHHhhhhc--CCcEEEE
Q 042388 262 YHFV---RL--------MGRAASHITLECALQT--HPNITII 290 (567)
Q Consensus 262 ~~fV---ev--------MGR~ag~LAL~~aLat--~pnivlI 290 (567)
..+| |+ -|...-++||.+|++- .++++++
T Consensus 302 ~~li~GGEtTV~v~g~G~GGRNqElaL~~a~~l~~~~~~~~l 343 (414)
T d2b8na1 302 AALIFGGETVVHVKGNGIGGRNQELALSAAIALEGIEGVILC 343 (414)
T ss_dssp EEEEEEECCBCCCCSCCCCCHHHHHHHHHHHHTTTCTTEEEE
T ss_pred eEEEEcceeEEEecCCCCCcccHHHHHHHHHHhcCCCCeEEE
Confidence 3444 44 5566678999888752 3444444
No 8
>d1vlja_ e.22.1.2 (A:) NADH-dependent butanol dehydrogenase A (TM0820) {Thermotoga maritima [TaxId: 2336]}
Probab=78.31 E-value=1.7 Score=42.99 Aligned_cols=58 Identities=16% Similarity=0.158 Sum_probs=46.0
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcC-------------CCCccEEEecccCcCC
Q 042388 168 TPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSK-------------DMKTRVIGCPKTIDGD 225 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~-------------g~~i~VIgVPKTIDND 225 (567)
+.++.+++++.+++.+.|.+|-|||--+++.|..++-.+... ...+++|.||-|--++
T Consensus 77 t~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~P~i~iPTt~gtg 147 (398)
T d1vlja_ 77 VLSKVHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVAAGALYEGDIWDAFIGKYQIEKALPIFDVLTISATG 147 (398)
T ss_dssp BHHHHHHHHHHHHHTTCSEEEEEESHHHHHHHHHHHHHTTCSSCGGGGGGTSCCCCCCCCEEEEECSCSSC
T ss_pred CHHHHHHHhhhcccccCceEEecCCcchhhHHHHHHHHhhcccchHHhhcccccccCCCCeeeeecccccc
Confidence 568899999999999999999999999999998887654322 2357899999655443
No 9
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}
Probab=77.52 E-value=0.98 Score=42.84 Aligned_cols=62 Identities=16% Similarity=0.180 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHh
Q 042388 170 EQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDT 239 (567)
Q Consensus 170 e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdT 239 (567)
.+..+.++.+...+.|.+|++|||||...+.. .+.+.+.++++.-+|.==-||+. .++|..+
T Consensus 45 ~~~~~~~~~~~~~~~d~ivv~GGDGTv~~v~~---~l~~~~~~~~l~iiP~GTgN~~a-----r~l~~~~ 106 (312)
T d2qv7a1 45 GDATLEAERAMHENYDVLIAAGGDGTLNEVVN---GIAEKPNRPKLGVIPMGTVNDFG-----RALHIPN 106 (312)
T ss_dssp THHHHHHHHHTTTTCSEEEEEECHHHHHHHHH---HHTTCSSCCEEEEEECSSCCHHH-----HHTTCCS
T ss_pred cHHHHHHHHHHHcCCCEEEEEcCCcHHHHHHH---HHHhhccccceEEeecCCCCcch-----hhccccc
Confidence 34556666667788999999999999776542 23344556778888998889887 3666643
No 10
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]}
Probab=76.66 E-value=1.9 Score=40.35 Aligned_cols=87 Identities=15% Similarity=0.177 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecCchhHHHHH-HHHHHHhcCCCCcc-EEEecccCcCCCCCCCCCCCCChHhHHHHHHHHH
Q 042388 171 QFKQAEETAKKLDLDGLVVIGGDDSNTNAC-LLAENFRSKDMKTR-VIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMI 248 (567)
Q Consensus 171 ~~~~~~~~l~~~~id~LViIGGddS~t~A~-~Lae~~~~~g~~i~-VIgVPKTIDNDL~~~~ie~S~GFdTA~k~~ae~I 248 (567)
+..++++.+...+.|.+|++|||||...+. -|.+ ..+...+ +.-+|.==-||+. .++|..+... +++
T Consensus 41 ~a~~~~~~~~~~~~d~Ivv~GGDGTv~ev~~gl~~---~~~~~~p~lgilP~GTgN~~A-----r~lg~~~~~~---~a~ 109 (295)
T d2bona1 41 DAARYVEEARKFGVATVIAGGGDGTINEVSTALIQ---CEGDDIPALGILPLGTANDFA-----TSVGIPEALD---KAL 109 (295)
T ss_dssp HHHHHHHHHHHHTCSEEEEEESHHHHHHHHHHHHH---CCSSCCCEEEEEECSSSCHHH-----HHTTCCSSHH---HHH
T ss_pred hHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHHh---ccCCCCceEEEEECCcccchH-----HHcCCCcchh---hhh
Confidence 456777777788999999999999976543 3433 2222223 4456987778876 3566544332 233
Q ss_pred HHHHHHHhhcCCeeEEEEecCCC
Q 042388 249 GNVMTDARSTGKYYHFVRLMGRA 271 (567)
Q Consensus 249 ~ni~~da~S~~k~~~fVevMGR~ 271 (567)
..+. ....+.+.+.++-|+.
T Consensus 110 ~~i~---~g~~~~id~~~v~~~~ 129 (295)
T d2bona1 110 KLAI---AGDAIAIDMAQVNKQT 129 (295)
T ss_dssp HHHH---HSEEEEEEEEEETTSC
T ss_pred hhhc---ccceEEeeeeeeecce
Confidence 3332 1233446677776653
No 11
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=76.27 E-value=0.83 Score=44.08 Aligned_cols=54 Identities=24% Similarity=0.351 Sum_probs=35.6
Q ss_pred HcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHH--HHHHHHHH
Q 042388 181 KLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKI--FSEMIGNV 251 (567)
Q Consensus 181 ~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~--~ae~I~ni 251 (567)
.-++|.+|++|||||+-.|+..... .+++|+||-. -++||-|.... +.+++..+
T Consensus 69 ~~~~Dlvi~lGGDGT~L~a~~~~~~-----~~~PilGin~------------G~lGFL~~~~~~~~~~~l~~~ 124 (302)
T d1u0ta_ 69 ADGCELVLVLGGDGTFLRAAELARN-----ASIPVLGVNL------------GRIGFLAEAEAEAIDAVLEHV 124 (302)
T ss_dssp ---CCCEEEEECHHHHHHHHHHHHH-----HTCCEEEEEC------------SSCCSSCSEEGGGHHHHHHHH
T ss_pred cccccEEEEEcCChHHHHHHHHhhc-----cCCeEEEeCC------------CccceecccchhHHHHHHHHH
Confidence 3578999999999997776654321 2689999953 28888887664 33444444
No 12
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=76.24 E-value=1.9 Score=41.99 Aligned_cols=60 Identities=20% Similarity=0.166 Sum_probs=47.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcC-------------CCCccEEEecccCcCCCC
Q 042388 168 TPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSK-------------DMKTRVIGCPKTIDGDLK 227 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~-------------g~~i~VIgVPKTIDNDL~ 227 (567)
+.++.+++++.+++.+.|.+|-|||--+++.|..++-.+... ...+++|.||-|--.+-.
T Consensus 71 ~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~p~i~IPTt~gtgse 143 (359)
T d1o2da_ 71 SFDNVMKAVERYRNDSFDFVVGLGGGSPMDFAKAVAVLLKEKDLSVEDLYDREKVKHWLPVVEIPTTAGTGSE 143 (359)
T ss_dssp BHHHHHHHHHHHTTSCCSEEEEEESHHHHHHHHHHHHHTTSTTCCSGGGGCGGGCCCCCCEEEEECSSCCCGG
T ss_pred CHHHHHHhhhhccccCCceEEecccccchhHHHHHHHHHhCCCCchhhccCcccccCCCCeEEeccccccchh
Confidence 568899999999999999999999999999998887544211 235789999988655543
No 13
>d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=75.45 E-value=18 Score=31.97 Aligned_cols=90 Identities=14% Similarity=0.113 Sum_probs=61.7
Q ss_pred cEEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCCh
Q 042388 90 LKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETP 169 (567)
Q Consensus 90 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~~ 169 (567)
|+||||+..-..|=...++.|+-+.+++. |.++.-+. +.+ +.
T Consensus 1 ktIg~i~~~~~~pf~~~~~~gi~~~~~~~--gy~~~~~~------------------------~~~------------d~ 42 (282)
T d1dbqa_ 1 KSIGLLATSSEAAYFAEIIEAVEKNCFQK--GYTLILGN------------------------AWN------------NL 42 (282)
T ss_dssp CEEEEEESCTTSHHHHHHHHHHHHHHHHH--TCEEEEEE------------------------CTT------------CH
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHHHHHc--CCEEEEEe------------------------CCC------------CH
Confidence 68999999999999999999999987653 33332111 111 34
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccC
Q 042388 170 EQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTI 222 (567)
Q Consensus 170 e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTI 222 (567)
+...+.++.+...++|++|+.+.+.+-.....+.+ .. +++||.+-...
T Consensus 43 ~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~---~~--~iPvV~~~~~~ 90 (282)
T d1dbqa_ 43 EKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEE---YR--HIPMVVMDWGE 90 (282)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECSCCCHHHHHHHHH---TT--TSCEEEEECSS
T ss_pred HHHHHHHHHHHhcCCCEEeeecccccchhhhhHHh---hc--CCCceEEEecc
Confidence 55678899999999999999987766433332222 12 46777765444
No 14
>d1gsoa2 c.30.1.1 (A:-2-103) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Escherichia coli [TaxId: 562]}
Probab=74.96 E-value=2.2 Score=34.72 Aligned_cols=93 Identities=16% Similarity=0.249 Sum_probs=59.3
Q ss_pred cEEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCCh
Q 042388 90 LKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETP 169 (567)
Q Consensus 90 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~~ 169 (567)
+||-||=|||- =|+..+.+. +.....++|-+. |-.|.- +...+.....+.
T Consensus 3 MkVLvIGsGgR---EhAia~~L~----~s~~~~~l~~~p-gn~g~~----------------------~~~~~~~~~~~~ 52 (105)
T d1gsoa2 3 MKVLVIGNGGR---EHALAWKAA----QSPLVETVFVAP-GNAGTA----------------------LEPALQNVAIGV 52 (105)
T ss_dssp EEEEEEECSHH---HHHHHHHHT----TCTTEEEEEEEE-CCHHHH----------------------HSTTEEECCCCT
T ss_pred CEEEEECCCHH---HHHHHHHHh----cCCCccEEEEec-CCCccc----------------------hhhhhccccccc
Confidence 68899988853 455555543 334456777554 443321 111121111234
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEE
Q 042388 170 EQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIG 217 (567)
Q Consensus 170 e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIg 217 (567)
.+++.+++.++++++| |||||=...+ +.=|+++|+++|+ +|+|
T Consensus 53 ~d~~~i~~~a~~~~id-lvviGPE~pL--~~Gl~D~l~~~gI--~vfG 95 (105)
T d1gsoa2 53 TDIPALLDFAQNEKID-LTIVGPEAPL--VKGVVDTFRAAGL--KIFG 95 (105)
T ss_dssp TCHHHHHHHHHHTTCS-EEEECSHHHH--HTTHHHHHHHTTC--CEES
T ss_pred CcHHHHHHHHHHhCcC-EEEECcHHHH--HhHHHHHHHHCCC--EEEC
Confidence 5688999999999999 8889988886 4457888888774 5776
No 15
>d2d6fa2 c.88.1.1 (A:84-435) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=71.65 E-value=3.4 Score=40.31 Aligned_cols=61 Identities=16% Similarity=0.151 Sum_probs=40.4
Q ss_pred ChHHHHHHHHHHHH---cCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCC
Q 042388 168 TPEQFKQAEETAKK---LDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKE 230 (567)
Q Consensus 168 ~~e~~~~~~~~l~~---~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ 230 (567)
+++++.++++.+++ -+.||+||+-|-|||.-.+.+-..+.+.. .+||-.=.-+--|-.++|
T Consensus 66 ~~~~w~~la~~i~~~~~~~~dG~VVtHGTDTl~~TA~~Ls~~l~~~--kPVVlTGa~rp~~~~~sD 129 (352)
T d2d6fa2 66 KPEYWVETARAVYGEIKDGADGVVVAHGTDTMHYTSAALSFMLRTP--VPVVFTGAQRSSDRPSSD 129 (352)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSEEEEECCTTTHHHHHHHHHHHEECS--SCEEEECCSSCTTSTTCT
T ss_pred CHHHHHHHHHHHHHhccccCCeEEEecCchhHHHHHHHHHHHhccC--CCEEEecccccccCcCcc
Confidence 67787777766653 37999999999999987665555555543 466655444444444444
No 16
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]}
Probab=63.55 E-value=5.3 Score=39.10 Aligned_cols=54 Identities=11% Similarity=0.058 Sum_probs=42.0
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhc----------------CCCCccEEEeccc
Q 042388 168 TPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRS----------------KDMKTRVIGCPKT 221 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~----------------~g~~i~VIgVPKT 221 (567)
+.++.+++++.+++.+.|.+|-|||--+++.|..++-.... ..-.+++|.||-|
T Consensus 73 ~~~~v~~~~~~~~~~~~D~IIavGGGs~iD~aK~ia~~~~~~~~~~~~~~~~~~~~~~~~~~P~i~VPTt 142 (390)
T d1oj7a_ 73 AYETLMNAVKLVREQKVTFLLAVGGGSVLDGTKFIAAAANYPENIDPWHILQTGGKEIKSAIPMGCVLTL 142 (390)
T ss_dssp BHHHHHHHHHHHHHHTCCEEEEEESHHHHHHHHHHHHHTTSCTTSCTTHHHHTTTTTCCCCCCEEEEESS
T ss_pred CHHHHHHHHHHHhhcCCCEEEecCCCccccHHHHHHHHhcCCcccchhhhhcccccccccCCCccccccc
Confidence 56789999999999999999999999999988877643211 1223679999954
No 17
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=61.59 E-value=2.2 Score=40.21 Aligned_cols=60 Identities=23% Similarity=0.298 Sum_probs=44.6
Q ss_pred cCCCEEEEecCchh--HHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhhcC
Q 042388 182 LDLDGLVVIGGDDS--NTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTG 259 (567)
Q Consensus 182 ~~id~LViIGGddS--~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~~ae~I~ni~~da~S~~ 259 (567)
.++||++|-||.|. ..+.-..++|+++++ ++..|| |+||..|+=.+|.-+-.+ .||.|..
T Consensus 56 ~~~dGIlvPGGFG~RG~eGki~ai~yARen~--iPfLGI---------------ClGmQ~avIE~ARnvlg~-~~A~S~E 117 (258)
T d1s1ma1 56 KGLDAILVPGGFGYRGVEGMITTARFARENN--IPYLGI---------------CLGMQVALIDYARHVANM-ENANSTE 117 (258)
T ss_dssp TTCSEEEECCCCSSTTHHHHHHHHHHHHHTT--CCEEEE---------------THHHHHHHHHHHHHHHCC-TTCEETT
T ss_pred cccccEEeecccCcCCHHHHHHHHHHHHHcC--ccHHHH---------------HHHHHHHHHHHHHHhCCC-CCCcCCC
Confidence 46999999999886 344455568887776 467773 999999988877655555 5888763
No 18
>d1jkxa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Escherichia coli [TaxId: 562]}
Probab=52.31 E-value=16 Score=32.53 Aligned_cols=87 Identities=15% Similarity=0.147 Sum_probs=45.4
Q ss_pred cEEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCCh
Q 042388 90 LKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETP 169 (567)
Q Consensus 90 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~~ 169 (567)
+||+|+.||+ | ..+..++++++..+-..++.++.- ++. +...++.....+....... ..++.+.
T Consensus 1 MkIaVl~SG~---G--SnL~aLl~a~~~~~l~~~I~~Vis------n~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~ 64 (209)
T d1jkxa_ 1 MNIVVLISGN---G--SNLQAIIDACKTNKIKGTVRAVFS------NKA----DAFGLERARQAGIATHTLI-ASAFDSR 64 (209)
T ss_dssp CEEEEEESSC---C--HHHHHHHHHHHTTSSSSEEEEEEE------SCT----TCHHHHHHHHTTCEEEECC-GGGCSSH
T ss_pred CEEEEEEecC---c--HHHHHHHHHHHcCCCCCEEEEEEe------CCC----Ccccchhhhccccceeeee-ccccccc
Confidence 5899999996 4 235567777654444567776641 110 0011222222222111111 1222233
Q ss_pred HHH-HHHHHHHHHcCCCEEEEecC
Q 042388 170 EQF-KQAEETAKKLDLDGLVVIGG 192 (567)
Q Consensus 170 e~~-~~~~~~l~~~~id~LViIGG 192 (567)
+.. +...+.++++++|.+|++|=
T Consensus 65 ~~~~~~~~~~l~~~~~Dliv~~g~ 88 (209)
T d1jkxa_ 65 EAYDRELIHEIDMYAPDVVVLAGF 88 (209)
T ss_dssp HHHHHHHHHHHGGGCCSEEEESSC
T ss_pred cchHHHHHHHHHhcCCCEEEEeee
Confidence 333 45677889999999888763
No 19
>d2a84a1 c.26.1.4 (A:3-288) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=48.69 E-value=10 Score=35.80 Aligned_cols=40 Identities=25% Similarity=0.375 Sum_probs=29.9
Q ss_pred HHHHHhhcCCeeEEEEecCC-CCcHHHHH-hhhhcCCcEEEE
Q 042388 251 VMTDARSTGKYYHFVRLMGR-AASHITLE-CALQTHPNITII 290 (567)
Q Consensus 251 i~~da~S~~k~~~fVevMGR-~ag~LAL~-~aLat~pnivlI 290 (567)
+.+..+...+.+.||=+||- |+||++|- .|...+.+++++
T Consensus 21 ~~~~~~~~g~~i~~VPTMGaLH~GHlsLi~~a~~~~~~~vvv 62 (286)
T d2a84a1 21 VSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVV 62 (286)
T ss_dssp HHHHHHHTTCCEEEEEECSSCCHHHHHHHHHHHTSTTCEEEE
T ss_pred HHHHHHHhCCeEEEEeCCcchhHHHHHHHHHHhhcCCCEEEE
Confidence 33444556677999999998 99999987 444567887764
No 20
>d1byka_ c.93.1.1 (A:) Trehalose repressor, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=48.31 E-value=35 Score=29.92 Aligned_cols=69 Identities=12% Similarity=0.197 Sum_probs=51.7
Q ss_pred CcEEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCC
Q 042388 89 SLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIET 168 (567)
Q Consensus 89 ~~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~ 168 (567)
.+.|||++..-+.|-.+.++.|+.+.+++. |..++-+ ++ + .+
T Consensus 2 ~k~Igvi~p~~~~~~~~~~~~~i~~~~~~~--Gy~~~~~------------------------~s-~-----------~d 43 (255)
T d1byka_ 2 DKVVAIIVTRLDSLSENLAVQTMLPAFYEQ--GYDPIMM------------------------ES-Q-----------FS 43 (255)
T ss_dssp CCEEEEEESCTTCHHHHHHHHHHHHHHHHH--TCEEEEE------------------------EC-T-----------TC
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHc--CCEEEEE------------------------eC-C-----------CC
Confidence 478999999999999999999999998764 2332211 11 1 14
Q ss_pred hHHHHHHHHHHHHcCCCEEEEecCchh
Q 042388 169 PEQFKQAEETAKKLDLDGLVVIGGDDS 195 (567)
Q Consensus 169 ~e~~~~~~~~l~~~~id~LViIGGddS 195 (567)
++...+.++.+...++||+|+.+=+..
T Consensus 44 ~~~~~~~i~~l~~~~vdgiIi~~~~~~ 70 (255)
T d1byka_ 44 PQLVAEHLGVLKRRNIDGVVLFGFTGI 70 (255)
T ss_dssp HHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred HHHHHHHHHHHHhccccceeeccccch
Confidence 566677889999999999999875543
No 21
>d1ujna_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Thermus thermophilus [TaxId: 274]}
Probab=48.29 E-value=13 Score=35.75 Aligned_cols=113 Identities=14% Similarity=0.110 Sum_probs=69.4
Q ss_pred CChHHHHHHHHHHHHcCC---CEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHH
Q 042388 167 ETPEQFKQAEETAKKLDL---DGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKI 243 (567)
Q Consensus 167 ~~~e~~~~~~~~l~~~~i---d~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~ 243 (567)
.+-+.++++.+.+.+.++ +.+|.|||--..+.|...|-.+. + +++.|.||-|.=-. ++.|+|--|+++
T Consensus 65 Ksl~~~~~i~~~l~~~~~~r~~~iiaiGGG~v~D~agf~A~~y~-r--gi~~i~vPTtlla~-----vDs~~g~k~~in- 135 (347)
T d1ujna_ 65 KSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFVAATYL-R--GVAYLAFPTTTLAI-----VDASVGGKTGIN- 135 (347)
T ss_dssp SSHHHHHHHHHHHHHHTCCTTCEEEEEESHHHHHHHHHHHHHBT-T--CCEEEEEECSHHHH-----HTTTSSCEEEEE-
T ss_pred CCHHHHHHHHHHHHHhhcccccceeEeechhhhhHHHHHhhhhc-C--Ccceeeccchhhhc-----cccccccccccc-
Confidence 356789999999999988 68999999777777766665432 3 46899999875211 112455444333
Q ss_pred HHHHHHHHHHHHhhcCCeeEEEEecCCCCcHHHHHhhhhcCCcEEEECCcchhhhcchHhHHHHHHHHHHHHHH
Q 042388 244 FSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSE 317 (567)
Q Consensus 244 ~ae~I~ni~~da~S~~k~~~fVevMGR~ag~LAL~~aLat~pnivlIpEe~~~~~~tL~~iv~~i~d~I~~R~~ 317 (567)
....--.+-+ -..|..|++=-.... ..+-.++...++++|+.-..
T Consensus 136 --------------~~~~kn~~g~--------------f~~P~~v~~D~~~l~-tlp~r~~~sG~~Eiik~~~i 180 (347)
T d1ujna_ 136 --------------LPEGKNLVGA--------------FHFPQGVYAELRALK-TLPLPTFKEGLVEAFKHGLI 180 (347)
T ss_dssp --------------ETTEEEEEEE--------------ECCCSEEEEEGGGGG-GSCHHHHHHHHHHHHHHHHH
T ss_pred --------------cccccccccc--------------ccCCCeeeccHHHHH-hhhHHHHHHHHHHHHHHhhc
Confidence 1111111111 126888887444332 34566777888888776543
No 22
>d1vcoa1 c.23.16.1 (A:298-547) CTP synthase PyrG, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=47.29 E-value=3 Score=39.12 Aligned_cols=60 Identities=23% Similarity=0.338 Sum_probs=45.0
Q ss_pred cCCCEEEEecCchh--HHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhhcC
Q 042388 182 LDLDGLVVIGGDDS--NTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTG 259 (567)
Q Consensus 182 ~~id~LViIGGddS--~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k~~ae~I~ni~~da~S~~ 259 (567)
.++||++|-||.|. ..+.-..++|.++++ ++..| .|+||..|+=.+|.-+-.+ .||.|..
T Consensus 57 ~~~dGIlvPGGFG~rG~eGki~ai~yARen~--iPfLG---------------IClGmQ~avIEfARnvlgl-~~A~s~E 118 (250)
T d1vcoa1 57 RDVSGILVPGGFGVRGIEGKVRAAQYARERK--IPYLG---------------ICLGLQIAVIEFARNVAGL-KGANSTE 118 (250)
T ss_dssp TTCSCEEECCCCSSTTHHHHHHHHHHHHHTT--CCEEE---------------ETHHHHHHHHHHHHHTSCC-TTCEETT
T ss_pred hcCCeEEecCCCCccchHHHHHHHHHHHHcc--hhHHH---------------HHHHHHHHHHHHHHHHHHh-hcccccc
Confidence 36899999999886 344445567777766 45666 3999999999888877777 3887754
No 23
>d1meoa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.78 E-value=32 Score=30.18 Aligned_cols=88 Identities=14% Similarity=0.139 Sum_probs=46.3
Q ss_pred EEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCC-cccccccCCCCCCh
Q 042388 91 KIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGG-FDMICSGRDKIETP 169 (567)
Q Consensus 91 ~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG-~~~LGS~R~k~~~~ 169 (567)
||||+.||+ |- | +..++++.+..+-+.++..+.- +.. +...+......+= +..+.. .......
T Consensus 2 ri~vl~SG~---Gs-n-l~aLl~~~~~~~l~~~I~~Vit------n~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 65 (205)
T d1meoa_ 2 RVAVLISGT---GS-N-LQALIDSTREPNSSAQIDIVIS------NKA----AVAGLDKAERAGIPTRVINH-KLYKNRV 65 (205)
T ss_dssp EEEEEESSS---CT-T-HHHHHHHHHSTTCSCEEEEEEE------SST----TCHHHHHHHHTTCCEEECCG-GGSSSHH
T ss_pred EEEEEEeCC---cH-h-HHHHHHHHhcCCCCCEEEEEEE------CCc----cccccccccccccccccccc-cccchhh
Confidence 899999996 32 2 5567777655444567776551 100 0001111111110 101111 1112234
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCch
Q 042388 170 EQFKQAEETAKKLDLDGLVVIGGDD 194 (567)
Q Consensus 170 e~~~~~~~~l~~~~id~LViIGGdd 194 (567)
+.-+...+.++++++|-+|++|-.-
T Consensus 66 ~~~~~l~~~l~~~~~Dliv~~g~~~ 90 (205)
T d1meoa_ 66 EFDSAIDLVLEEFSIDIVCLAGFMR 90 (205)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCCS
T ss_pred hHHHHHHHHHhhcccceeeeechhc
Confidence 5567788999999999888777543
No 24
>d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]}
Probab=40.02 E-value=22 Score=34.45 Aligned_cols=61 Identities=20% Similarity=0.232 Sum_probs=38.9
Q ss_pred ChHHHHHHHHHHHH---cCCCEEEEecCchhHHH-HHHHHHHHhcCCCCccEEEecccCcCCCCCCC
Q 042388 168 TPEQFKQAEETAKK---LDLDGLVVIGGDDSNTN-ACLLAENFRSKDMKTRVIGCPKTIDGDLKCKE 230 (567)
Q Consensus 168 ~~e~~~~~~~~l~~---~~id~LViIGGddS~t~-A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ 230 (567)
+++++.++++.+++ ..-+|+||.=|-|||.- |..|+..+. +.+.+||-.=.-.--+..++|
T Consensus 75 ~~~~~~~l~~~i~~~~~~~d~G~VvtHGTDTl~eTA~~L~~~l~--~~~kPVVlTGa~~P~~~~~sD 139 (363)
T d1zq1a2 75 KPKHWVKIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLR--NLGKPVVLVGAQRSSDRPSSD 139 (363)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSEEEEECCSSSHHHHHHHHHHHEE--SCCSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHhhcCCCCcEEEecCCCcHHHHHHHHHHHhc--CCCccEEEecccccccCCCcc
Confidence 57777777776654 23369999999999955 666654443 344567765444444444445
No 25
>d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]}
Probab=38.55 E-value=91 Score=27.22 Aligned_cols=86 Identities=16% Similarity=0.128 Sum_probs=57.3
Q ss_pred EEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCChH
Q 042388 91 KIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPE 170 (567)
Q Consensus 91 ~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~~e 170 (567)
-|||++..=.-|+...++.|+-++++.. |.++.=+. +++ .+.+
T Consensus 2 ~igv~~~~l~~~~~~~i~~~i~~~a~~~--Gy~v~v~~--------------------------------~~~---~~~~ 44 (271)
T d1jyea_ 2 LIGVATSSLALHAPSQIVAAILSRADQL--GASVVVSM--------------------------------VER---SGVE 44 (271)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHT--TCEEEEEE--------------------------------CCS---SSHH
T ss_pred EEEEEeCCCCChHHHHHHHHHHHHHHHc--CCEEEEEE--------------------------------CCC---CCHH
Confidence 4899999999999999999999987643 33321000 011 1346
Q ss_pred HHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEe
Q 042388 171 QFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGC 218 (567)
Q Consensus 171 ~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgV 218 (567)
+....++.+...++||||+.+..+... . +.+++.+.+ ++||.+
T Consensus 45 ~~~~~l~~l~~~~vdgiIl~~~~~~~~--~-~~~~~~~~~--iPvV~~ 87 (271)
T d1jyea_ 45 ACKTAVHNLLAQRVSGLIINYPLDDQD--A-IAVEAACTN--VPALFL 87 (271)
T ss_dssp HHHHHHHHHHTTTCSCEEEESCCCHHH--H-HHHHHHTTT--SCEEES
T ss_pred HHHHHHHHHHhcCCCEEEeccccCchh--H-HHHHHHhcC--CCeeee
Confidence 677888999999999999988666532 2 223344444 567665
No 26
>d4pgaa_ c.88.1.1 (A:) Glutaminase-asparaginase {Pseudomonas sp., 7A [TaxId: 306]}
Probab=38.29 E-value=83 Score=29.58 Aligned_cols=61 Identities=13% Similarity=0.238 Sum_probs=40.5
Q ss_pred ChHHHHHHHHHHH----HcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCC
Q 042388 168 TPEQFKQAEETAK----KLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKE 230 (567)
Q Consensus 168 ~~e~~~~~~~~l~----~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ 230 (567)
+++++.++.+.++ ..+.||+||+-|-|||.-.+.+-..+. +.+.+||-.=.-+--|-.++|
T Consensus 64 ~~~~w~~l~~~i~~~~~~~~~dG~Vi~HGTDTm~~tA~~L~~~~--~~~kpvVlTGs~~p~~~~~sD 128 (330)
T d4pgaa_ 64 TNDDLLKLGKRVAELADSNDVDGIVITHGTDTLEETAYFLNLVQ--KTDKPIVVVGSMRPGTAMSAD 128 (330)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCSEEEEECCSTTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHHhccCCCCeEEEeCCcCcHHHHHHHHHHhc--CCCCCEEEeccchhccccCcc
Confidence 5677666666554 358999999999999987555444443 556778876444444444444
No 27
>d1o7ja_ c.88.1.1 (A:) Asparaginase type II {Erwinia chrysanthemi [TaxId: 556]}
Probab=37.37 E-value=1.1e+02 Score=28.59 Aligned_cols=61 Identities=13% Similarity=0.157 Sum_probs=41.1
Q ss_pred ChHHHHHHHHHHHH----cCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCC
Q 042388 168 TPEQFKQAEETAKK----LDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKE 230 (567)
Q Consensus 168 ~~e~~~~~~~~l~~----~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ 230 (567)
+++++.++++.+++ -+.|++||.-|-|||.-.+.+...+.+. +.+||-.=.-.--|..++|
T Consensus 64 ~~~~~~~la~~i~~~~~~~~~dgiVv~HGTDTm~~ta~~Ls~~l~~--~kPVV~TGs~~p~~~~~sD 128 (325)
T d1o7ja_ 64 TGDVVLKLSQRVNELLARDDVDGVVITHGTDTVEESAYFLHLTVKS--DKPVVFVAAMRPATAISAD 128 (325)
T ss_dssp CHHHHHHHHHHHHHHHTSTTCCEEEEECCSTTHHHHHHHHHHHCCC--CSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHHhcccCcceEEEecCcCcHHHHHHHHHHHhcC--CCCeEEecccccccccCCc
Confidence 67888888877765 3799999999999998866665655544 3456654333333333444
No 28
>d1wsaa_ c.88.1.1 (A:) Asparaginase type II {Wolinella succinogenes [TaxId: 844]}
Probab=35.18 E-value=78 Score=29.67 Aligned_cols=61 Identities=8% Similarity=0.146 Sum_probs=42.0
Q ss_pred ChHHHHHHHHHHHH----cCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCC
Q 042388 168 TPEQFKQAEETAKK----LDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKE 230 (567)
Q Consensus 168 ~~e~~~~~~~~l~~----~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ 230 (567)
+++++.++++.+++ .+.||+||+-|-|||.-.+.+-..+.+. +.+||-.=.-+--|..++|
T Consensus 62 ~~~~w~~l~~~i~~~~~~~~~dGiVv~HGTDTm~~ta~~Ls~~~~~--~kPVV~TGa~~p~~~~~sD 126 (328)
T d1wsaa_ 62 TGKVWLKLAKRVNELLAQKETEAVIITHGTDTMEETAFFLNLTVKS--QKPVVLVGAMRPGSSMSAD 126 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSTTCCCEEEECCSSSHHHHHHHHHHHCCC--SSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHHhccCCCceEEEeCCcCcHHHHHHHHHHhccC--CCCEEEecccccCCCcCcc
Confidence 67888888777765 4799999999999998766555555544 4467665444444444444
No 29
>d1sg6a_ e.22.1.1 (A:) Dehydroquinate synthase, DHQS {Aspergillus nidulans [TaxId: 162425]}
Probab=35.04 E-value=30 Score=33.52 Aligned_cols=110 Identities=14% Similarity=0.150 Sum_probs=68.7
Q ss_pred ChHHHHHHHHHHHHcCC-----CEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCCCCCCChHhHHH
Q 042388 168 TPEQFKQAEETAKKLDL-----DGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACK 242 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~i-----d~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ie~S~GFdTA~k 242 (567)
+.+.++++.+.+.++++ |.+|-+||--.++.|..+|..+.+ +++.|.||-|.--+. +.|+|--|+++
T Consensus 82 s~~~~~~i~~~~~~~~~~~~r~d~IiaiGGG~v~D~ak~~A~~y~r---gi~~i~vPTtlla~~-----Das~g~k~~in 153 (389)
T d1sg6a_ 82 SRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMR---GVRYVQVPTTLLAMV-----DSSIGGKTAID 153 (389)
T ss_dssp SHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHHHHHHHHHHHHGGG---CCEEEEEECSHHHHH-----TTTSSCEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCcCCCceEEEeccchHHHHHHHHHHHHhc---CCceeEeccchhccc-----cccccceeeec
Confidence 56778889998888884 589999998888888888765432 478999997642111 12333322221
Q ss_pred HHHHHHHHHHHHHhhcCCeeEEEEecCCCCcHHHHHhhhhcCCcEEEECCcchhhhcchHhHHHHHHHHHHHH
Q 042388 243 IFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKR 315 (567)
Q Consensus 243 ~~ae~I~ni~~da~S~~k~~~fVevMGR~ag~LAL~~aLat~pnivlIpEe~~~~~~tL~~iv~~i~d~I~~R 315 (567)
.- ..+++ + +.-..|..|++--++.. ...-..+...++|+|+.-
T Consensus 154 ~~------------~~kn~------~-----------g~~~~P~~V~iD~~~l~-tlP~r~~~aG~~e~ik~~ 196 (389)
T d1sg6a_ 154 TP------------LGKNL------I-----------GAIWQPTKIYIDLEFLE-TLPVREFINGMAEVIKTA 196 (389)
T ss_dssp ET------------TEEEE------E-----------EEECCCSEEEEEGGGGG-TSCHHHHHHHHHHHHHHH
T ss_pred cc------------cccce------e-----------eecchhhhhhhhhhhhc-chHHHHHHhhhhhhhhhh
Confidence 10 00111 1 11246999998666543 345567788888888543
No 30
>d1ihoa_ c.26.1.4 (A:) Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) {Escherichia coli [TaxId: 562]}
Probab=34.90 E-value=18 Score=33.93 Aligned_cols=42 Identities=19% Similarity=0.352 Sum_probs=32.1
Q ss_pred HHHHHHhhcCCeeEEEEecCC-CCcHHHHHhhhhcCCcEEEEC
Q 042388 250 NVMTDARSTGKYYHFVRLMGR-AASHITLECALQTHPNITIIG 291 (567)
Q Consensus 250 ni~~da~S~~k~~~fVevMGR-~ag~LAL~~aLat~pnivlIp 291 (567)
+.....+..++.+.||=+||- |.||++|-=.-...++.++++
T Consensus 12 ~~~~~~r~~g~~ig~VPTMGaLH~GHlsLi~~A~~~~~~vvvS 54 (282)
T d1ihoa_ 12 QQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEAKARADVVVVS 54 (282)
T ss_dssp HHHHHHHHTTCCEEEEEECSCCCHHHHHHHHHHHHHCSEEEEE
T ss_pred HHHHHHHHcCCcEEEEcCCcchhHHHHHHHHHHHHhCCcEEEE
Confidence 333445556778999999997 899999976666778887764
No 31
>d1vdra_ c.71.1.1 (A:) Dihydrofolate reductase, prokaryotic type {Haloferax volcanii [TaxId: 2246]}
Probab=34.79 E-value=11 Score=32.09 Aligned_cols=54 Identities=22% Similarity=0.195 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCCC
Q 042388 171 QFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEV 231 (567)
Q Consensus 171 ~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~i 231 (567)
.++++++.+++.+-+-++||||-.-...+..++ -.+-+--||.+.++|..-+.+
T Consensus 80 s~~~a~~~~~~~~~~~i~IiGG~~iy~~~l~~~-------d~i~lT~I~~~~~gD~~FP~~ 133 (157)
T d1vdra_ 80 SVEEAVDIAASLDAETAYVIGGAAIYALFQPHL-------DRMVLSRVPGEYEGDTYYPEW 133 (157)
T ss_dssp SHHHHHHHHHHTTCSCEEEEECHHHHHHHGGGC-------SEEEEEEEEEECCCSEECCCC
T ss_pred eHHHHHHHHhcCCCceEEEEechHHhhhhcccC-------CEEEEEEeCCcccCCEECCCC
Confidence 467888889999999999999988776543221 135566789999999865444
No 32
>d1nnsa_ c.88.1.1 (A:) Asparaginase type II {Escherichia coli [TaxId: 562]}
Probab=33.72 E-value=1.2e+02 Score=28.12 Aligned_cols=61 Identities=10% Similarity=0.102 Sum_probs=41.7
Q ss_pred ChHHHHHHHHHHHH--cCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCC
Q 042388 168 TPEQFKQAEETAKK--LDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKE 230 (567)
Q Consensus 168 ~~e~~~~~~~~l~~--~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ 230 (567)
+++++..+.+.+++ -+.|++||+-|-|||.-.+.+-..+.+ .+.+||-.=.-.--|..++|
T Consensus 62 ~~~~~~~l~~~i~~~~~~~dG~Vv~HGTDTm~~tA~~L~~~~~--~~kpVV~TGa~~p~~~~~sD 124 (326)
T d1nnsa_ 62 NDNVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVK--CDKPVVMVGAMRPSTSMSAD 124 (326)
T ss_dssp CHHHHHHHHHHHHHHGGGCSEEEEECCSSSHHHHHHHHHHHCC--CCSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHhhccCCcEEEecCcCcHHHHHHHHHHHhc--cCCcEEEeccccccCCCCcc
Confidence 67777777777755 579999999999999875555444443 45677776554444455455
No 33
>d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]}
Probab=33.63 E-value=1.5e+02 Score=25.86 Aligned_cols=92 Identities=15% Similarity=0.110 Sum_probs=61.3
Q ss_pred cEEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCCh
Q 042388 90 LKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETP 169 (567)
Q Consensus 90 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~~ 169 (567)
+|||++..+.+-|-..+++.|+-++++.. |.++... + .+ +.
T Consensus 2 ~kIg~v~~~~~~p~~~~~~~g~~~aa~~~--G~~~i~~------------------------~-~~------------d~ 42 (305)
T d8abpa_ 2 LKLGFLVKQPEEPWFQTEWKFADKAGKDL--GFEVIKI------------------------A-VP------------DG 42 (305)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHHH--TEEEEEE------------------------E-CC------------SH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHHHHc--CCEEEEE------------------------c-CC------------CH
Confidence 69999999999999999999999987653 2222110 0 01 23
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcC
Q 042388 170 EQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDG 224 (567)
Q Consensus 170 e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDN 224 (567)
++....++.+...++|++|+..-+.+... .+.+.+.+.| ++||.+-..+++
T Consensus 43 ~~q~~~i~~li~~~vDgiIi~~~~~~~~~--~~~~~a~~~g--iPVV~~d~~~~~ 93 (305)
T d8abpa_ 43 EKTLNAIDSLAASGAKGFVICTPDPKLGS--AIVAKARGYD--MKVIAVDDQFVN 93 (305)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCGGGHH--HHHHHHHHTT--CEEEEESSCCBC
T ss_pred HHHHHHHHHHHHcCCCEEEEccccccccH--HHHHHHHhcC--CCEEEEcCcccc
Confidence 44566788889999999999987665322 1223333444 678887444443
No 34
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=33.38 E-value=20 Score=34.06 Aligned_cols=51 Identities=24% Similarity=0.273 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCC
Q 042388 169 PEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGD 225 (567)
Q Consensus 169 ~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDND 225 (567)
++.++++. .+.+.+.|.+|-|||--.++.|..++-. .++++|.||-|--.|
T Consensus 70 ~~~i~~~~-~~~~~~~D~IIavGGGs~~D~aK~ia~~-----~~~P~I~IPTTa~tg 120 (364)
T d1kq3a_ 70 DEEIERLS-GLVEEETDVVVGIGGGKTLDTAKAVAYK-----LKKPVVIVPTIASTD 120 (364)
T ss_dssp HHHHHHHH-TTCCTTCCEEEEEESHHHHHHHHHHHHH-----TTCCEEEEESSCCCS
T ss_pred cHHHHHHH-HHhhccCcEEEEeccCccceeecccccc-----ccccceeeccccccc
Confidence 44555543 3456789999999998777777766632 256899999884433
No 35
>d2fvya1 c.93.1.1 (A:2-306) Galactose/glucose-binding protein {Escherichia coli [TaxId: 562]}
Probab=32.48 E-value=1.5e+02 Score=25.54 Aligned_cols=93 Identities=12% Similarity=0.041 Sum_probs=60.5
Q ss_pred cEEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCCCh
Q 042388 90 LKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETP 169 (567)
Q Consensus 90 ~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~~~ 169 (567)
.||||++....-|=..+++.|+-+.++. +.+.++.-+ +..+ +.
T Consensus 2 ~kIgv~~~~~~~~f~~~i~~gi~~~a~~-~~~~~l~~~------------------------~~~~------------~~ 44 (305)
T d2fvya1 2 TRIGVTIYKYDDNFMSVVRKAIEQDAKA-APDVQLLMN------------------------DSQN------------DQ 44 (305)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHHHHT-CTTEEEEEE------------------------ECTT------------CH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHHHH-cCCcEEEEE------------------------cCCC------------CH
Confidence 6999999998999999999999877642 223333210 1111 34
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCc
Q 042388 170 EQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTID 223 (567)
Q Consensus 170 e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTID 223 (567)
+...+.++.+...++|++++..-+....... +.+. .+. +++||.+..-++
T Consensus 45 ~~q~~~i~~li~~~vDgiii~~~~~~~~~~~-~~~~-~~~--~ipvv~~~~~~~ 94 (305)
T d2fvya1 45 SKQNDQIDVLLAKGVKALAINLVDPAAAGTV-IEKA-RGQ--NVPVVFFNKEPS 94 (305)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSSGGGHHHH-HHHH-HTT--TCCEEEESSCCC
T ss_pred HHHHHHHHHHHHcCCCEEEeecccccccHHH-HHHH-Hhc--CCceeeeeeccc
Confidence 5566777888889999999998887755443 3232 333 456777654443
No 36
>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}
Probab=31.92 E-value=26 Score=27.97 Aligned_cols=50 Identities=20% Similarity=0.225 Sum_probs=37.0
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEe
Q 042388 166 IETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGC 218 (567)
Q Consensus 166 ~~~~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgV 218 (567)
+.+.++..++.+.+.+....-++||||--. +..+|+.+.+.|.++.+|..
T Consensus 12 ~~~~~da~~i~~~~~~~~~k~vvViGgG~i---G~E~A~~l~~~g~~Vtlie~ 61 (123)
T d1nhpa2 12 MRGRQWAIKLKQKTVDPEVNNVVVIGSGYI---GIEAAEAFAKAGKKVTVIDI 61 (123)
T ss_dssp CCHHHHHHHHHHHHTCTTCCEEEEECCSHH---HHHHHHHHHHTTCEEEEEES
T ss_pred eCCHHHHHHHHHHhhccCCCEEEEECChHH---HHHHHHHhhccceEEEEEEe
Confidence 556777888888887777888999988754 34566777778888777643
No 37
>d1i60a_ c.1.15.4 (A:) Hypothetical protein IolI {Bacillus subtilis [TaxId: 1423]}
Probab=30.54 E-value=1.3e+02 Score=26.14 Aligned_cols=48 Identities=21% Similarity=0.202 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHcCCCEEEEecCchh-----HHHHHHHHHHHhcCCCCccEEEe
Q 042388 171 QFKQAEETAKKLDLDGLVVIGGDDS-----NTNACLLAENFRSKDMKTRVIGC 218 (567)
Q Consensus 171 ~~~~~~~~l~~~~id~LViIGGddS-----~t~A~~Lae~~~~~g~~i~VIgV 218 (567)
.++..++.+++.+++++=+.+.+.. -.....|.+.+.++|+++..+..
T Consensus 15 ~l~~~l~~a~~~Gf~~IEl~~~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~ 67 (278)
T d1i60a_ 15 NLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNA 67 (278)
T ss_dssp CHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEE
T ss_pred CHHHHHHHHHHHCcCEEEeCCccccccccCcccHHHHHHHHHHcCCcEEEEec
Confidence 4788899999999999998877531 12356678888887765444443
No 38
>d1xmpa_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Bacillus anthracis [TaxId: 1392]}
Probab=28.95 E-value=31 Score=29.49 Aligned_cols=46 Identities=26% Similarity=0.343 Sum_probs=23.3
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecC-chhHHHHHHHHHHHhcCCCCccEEEecc
Q 042388 168 TPEQFKQAEETAKKLDLDGLVVIGG-DDSNTNACLLAENFRSKDMKTRVIGCPK 220 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~id~LViIGG-ddS~t~A~~Lae~~~~~g~~i~VIgVPK 220 (567)
+++.+.+.++.+++.+.+.+|.+=| .+.+.++ ++ -....+|||||-
T Consensus 41 tp~rl~~~~~~~~~~~~~viIa~AG~aa~Lpgv--va-----~~t~~PVIgVP~ 87 (155)
T d1xmpa_ 41 TPDYMFEYAETARERGLKVIIAGAGGAAHLPGM--VA-----AKTNLPVIGVPV 87 (155)
T ss_dssp SHHHHHHHHHHTTTTTCCEEEEEEESSCCHHHH--HH-----TTCCSCEEEEEE
T ss_pred ChHHHHHHHHHHHhhcceEEEeecccCCCchhH--HH-----HhccceEEEEEe
Confidence 4555555555555555544433322 2222222 11 134679999996
No 39
>d1weha_ c.129.1.1 (A:) Hypothetical protein TT1887 (TTHA0294) {Thermus thermophilus [TaxId: 274]}
Probab=28.38 E-value=1.1e+02 Score=25.79 Aligned_cols=58 Identities=19% Similarity=0.215 Sum_probs=35.1
Q ss_pred cccccCCCCCCh--HHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEe-ccc
Q 042388 158 MICSGRDKIETP--EQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGC-PKT 221 (567)
Q Consensus 158 ~LGS~R~k~~~~--e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgV-PKT 221 (567)
..||+|.+..++ +.-++.-+.+-+++.. ||.=||.|.|..+ ++-..+.|- .|||| |.+
T Consensus 6 Vfgss~~~~~~~~~~~a~~lG~~la~~g~~-lv~GGg~G~M~a~---a~ga~~~gG--~~iGv~~~~ 66 (171)
T d1weha_ 6 VFVSSRLSPEDPLYARWVRYGEVLAEEGFG-LACGGYQGGMEAL---ARGVKAKGG--LVVGVTAPA 66 (171)
T ss_dssp EECCSSCCTTSHHHHHHHHHHHHHHHTTEE-EEECCSSTHHHHH---HHHHHHTTC--CEEECCCGG
T ss_pred EEecCCCCCCCHHHHHHHHHHHHHHHCCCc-eeeCcchHHHHHH---HHHHHhccC--ceeeeeecc
Confidence 568898877543 3344556667777774 5665555555544 444555554 48888 444
No 40
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=28.21 E-value=1.3e+02 Score=25.98 Aligned_cols=97 Identities=7% Similarity=-0.055 Sum_probs=62.9
Q ss_pred CCcEEEEEecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccccCCCCC
Q 042388 88 KSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIE 167 (567)
Q Consensus 88 ~~~~IgIv~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS~R~k~~ 167 (567)
..+|||+|.....-|=-..+..|+-++++.. |.++. + . +.+. .
T Consensus 2 ~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~--G~~v~----------------~--------~--------~~~~---~ 44 (316)
T d1tjya_ 2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKAL--GIDVT----------------Y--------D--------GPTE---P 44 (316)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHHHHHHH--TCEEE----------------E--------C--------CCSS---C
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHc--CCEEE----------------E--------E--------ECCC---C
Confidence 3479999999999999999999999987753 22321 0 0 1111 1
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCC
Q 042388 168 TPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGD 225 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDND 225 (567)
+.++..+.++.+...++|++|+...+..... ..+.+ ..+. +++||.+--.+.++
T Consensus 45 d~~~q~~~i~~~i~~~~dgIIi~~~~~~~~~-~~~~~-a~~~--gi~vv~~d~~~~~~ 98 (316)
T d1tjya_ 45 SVSGQVQLVNNFVNQGYDAIIVSAVSPDGLC-PALKR-AMQR--GVKILTWDSDTKPE 98 (316)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSSSSTTH-HHHHH-HHHT--TCEEEEESSCCCGG
T ss_pred CHHHHHHHHHHHHhcCCCeeeecccccchhh-hhhhh-hhcc--cccceecccccccc
Confidence 4566677888888999999999988765432 22322 2233 35677665444433
No 41
>d1agxa_ c.88.1.1 (A:) Glutaminase-asparaginase {Acinetobacter glutaminasificans [TaxId: 474]}
Probab=27.47 E-value=55 Score=30.76 Aligned_cols=61 Identities=8% Similarity=0.152 Sum_probs=39.4
Q ss_pred ChHHHHHHHHHHHH----cCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCC
Q 042388 168 TPEQFKQAEETAKK----LDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKE 230 (567)
Q Consensus 168 ~~e~~~~~~~~l~~----~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ 230 (567)
+++++.++++.+++ -+.||+||+-|-|||.-.+.+-.++... +.+||-.=.-+--|-.++|
T Consensus 63 ~~~~w~~la~~i~~~~~~~~~dG~VVtHGTDTm~~TA~~Ls~~l~~--~kPVVlTGsqrp~~~~~sD 127 (331)
T d1agxa_ 63 TDKELLSLARQVNDLVKKPSVNGVVITHGTDTMEETAFFLNLVVHT--DKPIVLVGSMRPSTALSAD 127 (331)
T ss_dssp CHHHHHHHHHHHHHHHTSTTCCEEEEECCGGGHHHHHHHHHHHCCC--SSCEEEECCSSCTTSTTCS
T ss_pred CHHHHHHHHHHHHHHhcccCCceEEEecCcCcHHHHHHHHHHHhcc--CCcEEEEeeccccCCCCcc
Confidence 67777777777654 4799999999999998766555555543 4556654333333333444
No 42
>d1uf3a_ d.159.1.6 (A:) Hypothetical protein TT1561 {Thermus thermophilus [TaxId: 274]}
Probab=26.55 E-value=54 Score=27.26 Aligned_cols=51 Identities=12% Similarity=0.148 Sum_probs=36.7
Q ss_pred ChHHHHHHHHHHHHcCCCEEEEecC---chh-HHHHHHHHHHHhcCCCCccEEEecc
Q 042388 168 TPEQFKQAEETAKKLDLDGLVVIGG---DDS-NTNACLLAENFRSKDMKTRVIGCPK 220 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~~id~LViIGG---ddS-~t~A~~Lae~~~~~g~~i~VIgVPK 220 (567)
+.|-++++++.+++.+.|.+|+.|. .+. -..+..+.+.+.+.+ ++|+.||.
T Consensus 17 ~~eale~~~~~~~~~~~D~vv~~GDl~~~~~~~~~~~~~~~~L~~~~--~pv~~i~G 71 (228)
T d1uf3a_ 17 DLEALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEAH--LPTAYVPG 71 (228)
T ss_dssp CHHHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGGC--SCEEEECC
T ss_pred CHHHHHHHHHHHhhcCCCEEEECCCCCCCCccchHHHHhhhhhcccc--ceEEEEec
Confidence 3578999999999999999999886 221 223444555665554 57889986
No 43
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=26.01 E-value=69 Score=25.72 Aligned_cols=81 Identities=15% Similarity=0.180 Sum_probs=44.5
Q ss_pred EEEecCchh--HHHHHHHHHHHhcCCCCccEEEecccCcC----CC--CCCCCCCCCChHhHHHHHHHHHHHHHHHHhhc
Q 042388 187 LVVIGGDDS--NTNACLLAENFRSKDMKTRVIGCPKTIDG----DL--KCKEVPTSFGFDTACKIFSEMIGNVMTDARST 258 (567)
Q Consensus 187 LViIGGddS--~t~A~~Lae~~~~~g~~i~VIgVPKTIDN----DL--~~~~ie~S~GFdTA~k~~ae~I~ni~~da~S~ 258 (567)
+|+.|.+|| -|.+..|++.+.+++..+.++..|-|+-. .. .........-.+......+..+..+...+.+.
T Consensus 4 ivi~G~~GsGKTT~~~~La~~L~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (194)
T d1nksa_ 4 GIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGYAKDRDEMRKLSVEKQKKLQIDAAKGIAEEARAG 83 (194)
T ss_dssp EEEEECTTSCHHHHHHHHHHHHHTTTCCEEEEEHHHHHHHHHHTTTSCSSHHHHTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCcchHHHHHHHhhhhhhhccccchhhcccCHHHHHHHHHHHHHHh
Confidence 567787776 56688999999988988777776533211 11 10000012223333444444555555555555
Q ss_pred CCeeEEEEe
Q 042388 259 GKYYHFVRL 267 (567)
Q Consensus 259 ~k~~~fVev 267 (567)
...+.++..
T Consensus 84 ~~~~~i~~~ 92 (194)
T d1nksa_ 84 GEGYLFIDT 92 (194)
T ss_dssp CSSEEEEEE
T ss_pred CCCcEEEEc
Confidence 444555554
No 44
>d2ij9a1 c.73.1.3 (A:1-219) Uridylate kinase PyrH {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=25.80 E-value=63 Score=27.97 Aligned_cols=87 Identities=11% Similarity=0.145 Sum_probs=49.0
Q ss_pred EecCCCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCC---------EEEcCccccccccccCCcccccccCCC
Q 042388 95 VLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCK---------YVELSTEYIYPYRNQGGFDMICSGRDK 165 (567)
Q Consensus 95 v~sGG~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~---------~~eLt~~~v~~~~n~GG~~~LGS~R~k 165 (567)
+..|..-.+-|-.++.++-. . -+..++-+.-..+||++.+ +-+++++++......++. .+++...
T Consensus 106 v~~~~~~~~stD~laa~vA~--~--l~Ad~liilTDVDGvYt~dP~~~~~A~~i~~is~~e~~~~~~~~~~--~~~gg~~ 179 (219)
T d2ij9a1 106 VMGGTFPGHTTDATAALLAE--F--IKADVFINATNVDGVYSADPKSDTSAVKYDRLSPQQLVEIVSRSSA--KAGTNVV 179 (219)
T ss_dssp EECCCSSSSCTHHHHHHHHH--H--TTCSEEEEEESSSSCBCSSCSSSSSCCBCSEECHHHHHHHTCC-------CCCCC
T ss_pred EECCCCCCCcccHHHHHHHH--H--cCchHhhhccCcccccccccccCcccccccccCHHHHHHHhhccCc--cCCCCCc
Confidence 34444444556677766533 2 2345566777899999753 345566555544444332 2222211
Q ss_pred CCChHHHHHHHHHHHHcCCCEEEEecC
Q 042388 166 IETPEQFKQAEETAKKLDLDGLVVIGG 192 (567)
Q Consensus 166 ~~~~e~~~~~~~~l~~~~id~LViIGG 192 (567)
. . -++++.+.++++..+|+.|-
T Consensus 180 ~-k----~~Aa~~a~~~gi~~~I~~g~ 201 (219)
T d2ij9a1 180 I-D----LLAAKIIERSKIKTYVILGT 201 (219)
T ss_dssp S-C----HHHHHHHHHHTCCEEEEECC
T ss_pred c-h----HHHHHHHHHcCCcEEEecCC
Confidence 1 1 25678889999999998764
No 45
>d1weka_ c.129.1.1 (A:) Hypothetical protein TT1465 (TTHA1644) {Thermus thermophilus [TaxId: 274]}
Probab=24.09 E-value=1.1e+02 Score=26.79 Aligned_cols=68 Identities=12% Similarity=0.029 Sum_probs=40.3
Q ss_pred cccccccCCCCCCh--HHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccC-cCCCCCC
Q 042388 156 FDMICSGRDKIETP--EQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTI-DGDLKCK 229 (567)
Q Consensus 156 ~~~LGS~R~k~~~~--e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTI-DNDL~~~ 229 (567)
-.+.||+|.+..++ +.-.+.-+.+-+++++ ||.=||.|-|..++ +-..+.|- .|+||+..+ +..-++.
T Consensus 36 V~Vfgsa~~~~~~~~y~~A~~LG~~La~~g~~-lv~GGg~GlMgava---~ga~~~gG--~viGi~~~~~~~~~~~~ 106 (208)
T d1weka_ 36 VSVFGSARFGEGHPAYEAGYRLGRALAEAGFG-VVTGGGPGVMEAVN---RGAYEAGG--VSVGLNIELPHEQKPNP 106 (208)
T ss_dssp EEEECCSSCCTTSHHHHHHHHHHHHHHHHTCE-EEECSCSHHHHHHH---HHHHHTTC--CEEEEEECCTTCCCCCS
T ss_pred EEEECCCCCCCcChHHHHHHHHHHHHHhCcce-EEeCCCchHHHHHH---hhhhhcCC--ceecccccccccccccc
Confidence 34789999887543 3344556677888875 66656665555543 44445553 589985443 3333333
No 46
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]}
Probab=23.74 E-value=59 Score=29.84 Aligned_cols=49 Identities=10% Similarity=0.132 Sum_probs=44.1
Q ss_pred HHHHHHHHHHcCCCEE--EEecCchhHHHHHHHHHHHhcCCCCccEEEecc
Q 042388 172 FKQAEETAKKLDLDGL--VVIGGDDSNTNACLLAENFRSKDMKTRVIGCPK 220 (567)
Q Consensus 172 ~~~~~~~l~~~~id~L--ViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPK 220 (567)
++++++.+++.+=.+| ++.+||-+......+.+.+.+.|.++-=+|+|=
T Consensus 4 i~~~f~~lk~~~~~ali~y~t~G~P~~~~~~~~~~~l~~~GaDiiElGiPf 54 (267)
T d1qopa_ 4 YENLFAQLNDRREGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPF 54 (267)
T ss_dssp HHHHHHHHHHTTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCC
T ss_pred HHHHHHHHHHcCCceEEEEEeCcCCCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 6778888999998887 788999999999999999999999999999995
No 47
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=23.74 E-value=53 Score=26.95 Aligned_cols=106 Identities=17% Similarity=0.135 Sum_probs=63.5
Q ss_pred CcEEEEEecCCCCchhhHHH-HHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCcc-ccccccccCCcccccccCCCC
Q 042388 89 SLKIGVVLSGGQAPGGHNVI-SGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTE-YIYPYRNQGGFDMICSGRDKI 166 (567)
Q Consensus 89 ~~~IgIv~sGG~aPG~nnvI-~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~-~v~~~~n~GG~~~LGS~R~k~ 166 (567)
++||-|-+.+|+.=-.-.-+ +-+++ ..|++|+-. | ...+.+ .++.....+ .|+++-|-...
T Consensus 3 k~kVvi~~~~gD~H~lG~~mva~~l~-----~~G~~V~~L--G---------~~~p~e~iv~a~~~~~-~d~v~lS~~~~ 65 (137)
T d1ccwa_ 3 KKTIVLGVIGSDCHAVGNKILDHAFT-----NAGFNVVNI--G---------VLSPQELFIKAAIETK-ADAILVSSLYG 65 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHH-----HTTCEEEEE--E---------EEECHHHHHHHHHHHT-CSEEEEEECSS
T ss_pred CCEEEEEecCCChhHHHHHHHHHHHH-----HCCCeEEec--c---------cccCHHHHHHHHHhcC-CCEEEEeeccc
Confidence 46788888888765443333 33332 247776521 1 123333 445555554 58888776655
Q ss_pred CChHHHHHHHHHHHHcCC-CEEEEecCchhHH--HHHHHHHHHhcCCC
Q 042388 167 ETPEQFKQAEETAKKLDL-DGLVVIGGDDSNT--NACLLAENFRSKDM 211 (567)
Q Consensus 167 ~~~e~~~~~~~~l~~~~i-d~LViIGGddS~t--~A~~Lae~~~~~g~ 211 (567)
.+.+.+++.++.|++.+. +-.|++||.-+.. ....++..|++.|+
T Consensus 66 ~~~~~~~~~~~~l~~~~~~~i~iivGG~~~~~~~~~~~~~~~l~~~Gv 113 (137)
T d1ccwa_ 66 QGEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGY 113 (137)
T ss_dssp THHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTC
T ss_pred cchHHHHHHHHHHHHhccCCCEEEEeCCcCCCccccHHHHHHHHHcCC
Confidence 567788888999998886 6779999975422 13334445555564
No 48
>d1ig3a2 c.100.1.1 (A:10-178) Thiamin pyrophosphokinase, catalytic domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.49 E-value=62 Score=27.76 Aligned_cols=71 Identities=20% Similarity=0.292 Sum_probs=43.8
Q ss_pred cCccccccccccCCcccccccCCCCCChHHHHHHHHHHHHc------CCCEEEEecC-----chhHHHHHHHHHHHhcCC
Q 042388 142 LSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKL------DLDGLVVIGG-----DDSNTNACLLAENFRSKD 210 (567)
Q Consensus 142 Lt~~~v~~~~n~GG~~~LGS~R~k~~~~e~~~~~~~~l~~~------~id~LViIGG-----ddS~t~A~~Lae~~~~~g 210 (567)
++++..+.|...|- .++-.. . .+..+++++++.|.+. +++.++++|| |-++.+...|.++- +-
T Consensus 86 i~~~~~~~~~~~g~-~ii~~~-d--QD~TD~eKAl~~~~~~~~~~~~~~~~I~vlG~~GGR~DH~lanl~~L~~~~--~~ 159 (169)
T d1ig3a2 86 IRPEVKEYYTKKGC-DLISTP-D--QDHTDFTKCLQVLQRKIEEKELQVDVIVTLGGLGGRFDQIMASVNTLFQAT--HI 159 (169)
T ss_dssp SCHHHHHHHHHTTC-EEEECC-C--TTSCHHHHHHHHHHHHHHHTTCCCSEEEEECCSSSCHHHHHHHHHHHHHGG--GT
T ss_pred CChHHHHHHHhcCC-eEEECc-c--cCcchHHHHHHHHHHhhhhhccCCCEEEEEeCCCCcHHHHHHHHHHHHHhh--cC
Confidence 33445566666654 455322 2 2445799999888643 8999999999 44566666665532 22
Q ss_pred CCccEEEe
Q 042388 211 MKTRVIGC 218 (567)
Q Consensus 211 ~~i~VIgV 218 (567)
.+++||-+
T Consensus 160 ~~~~VIll 167 (169)
T d1ig3a2 160 TPVPIIII 167 (169)
T ss_dssp CSSCEEEE
T ss_pred CCCcEEEe
Confidence 35667754
No 49
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}
Probab=23.20 E-value=1.2e+02 Score=24.69 Aligned_cols=109 Identities=18% Similarity=0.206 Sum_probs=63.4
Q ss_pred CCCCcEEEEEecC----CCCchhhHHHHHHHHHHHHhcCCCEEEEEeCCcccccCCCEEEcCccccccccccCCcccccc
Q 042388 86 ENKSLKIGVVLSG----GQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICS 161 (567)
Q Consensus 86 ~~~~~~IgIv~sG----G~aPG~nnvI~gl~~~l~~~~~~~~v~Gf~~G~~GLl~~~~~eLt~~~v~~~~n~GG~~~LGS 161 (567)
.++.++|-||=|| ||+-=..-....+..+++.. +.+++=+-. + ++.|+. |.=-+
T Consensus 4 ~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~--g~~~iliN~--------N-----P~TVst-------d~d~a 61 (127)
T d1a9xa3 4 RTDIKSILILGAGPIVIGQACEFDYSGAQACKALREE--GYRVINVNS--------N-----PATIMT-------DPEMA 61 (127)
T ss_dssp CSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHH--TCEEEEECS--------C-----TTCGGG-------CGGGS
T ss_pred CCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHc--CCeEEEecC--------c-----hHhhhc-------Chhhc
Confidence 3567899999988 55555666666666666653 445442222 2 122211 11012
Q ss_pred cCCCCCChHHHHHHHHHHHHcCCCEEE-EecCchhHHHHHHHHHH--HhcCCCCccEEEec
Q 042388 162 GRDKIETPEQFKQAEETAKKLDLDGLV-VIGGDDSNTNACLLAEN--FRSKDMKTRVIGCP 219 (567)
Q Consensus 162 ~R~k~~~~e~~~~~~~~l~~~~id~LV-iIGGddS~t~A~~Lae~--~~~~g~~i~VIgVP 219 (567)
-|-.+ .|=.++.+.+.+++.+.|+++ ..||--.+..|..|.+. +++. +++++|.+
T Consensus 62 D~lYf-ePlt~e~v~~Ii~~E~pd~il~~~GGQtalnla~~L~~~giL~~~--~v~iLGt~ 119 (127)
T d1a9xa3 62 DATYI-EPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEF--GVTMIGAT 119 (127)
T ss_dssp SEEEC-SCCCHHHHHHHHHHHCCSEEECSSSHHHHHHHHHHHHHTTHHHHH--TCEECSSC
T ss_pred ceeee-ecCCHHHHHHHHHHhCcCCeEEEeeeehHhHHHHHHHHcCcHHhc--CCeEECCC
Confidence 22222 112255677778889999986 68888877778777654 3333 45788875
No 50
>d1ve1a1 c.79.1.1 (A:1-302) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermus thermophilus [TaxId: 274]}
Probab=22.42 E-value=60 Score=29.49 Aligned_cols=44 Identities=16% Similarity=0.256 Sum_probs=33.3
Q ss_pred HHHHHHHc--CCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecc
Q 042388 175 AEETAKKL--DLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPK 220 (567)
Q Consensus 175 ~~~~l~~~--~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPK 220 (567)
+.+.++++ ++|++|+--|.|++-.. ++.+|++.+-.++||+|=.
T Consensus 156 ~~EI~~q~~~~~d~vv~~vG~Gg~~~G--i~~~~~~~~~~~~iigve~ 201 (302)
T d1ve1a1 156 GPELYEALEGRIDAFVYGSGTGGTITG--VGRYLKERIPHVKVIAVEP 201 (302)
T ss_dssp HHHHHHHTTTCCSEEEEECSSSHHHHH--HHHHHHTTCTTCEEEEEEE
T ss_pred HHHHHHHcCCCCCeEEEeecCcHHHHH--HHHHHHhcCCCCEEEEEEe
Confidence 35666666 49999998888875544 6678888888899999854
No 51
>d2ocda1 c.88.1.1 (A:2-337) Asparaginase type II {Vibrio cholerae [TaxId: 666]}
Probab=22.37 E-value=2.8e+02 Score=25.48 Aligned_cols=62 Identities=16% Similarity=0.184 Sum_probs=40.8
Q ss_pred ChHHHHHHHHHHHHc--CCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecccCcCCCCCCC
Q 042388 168 TPEQFKQAEETAKKL--DLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKE 230 (567)
Q Consensus 168 ~~e~~~~~~~~l~~~--~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPKTIDNDL~~~~ 230 (567)
+++++.++.+.+++. +.||+||.=|-|||.-.+.+-.++.+ +.+.+||-.=.-.--|-.++|
T Consensus 63 ~~~~w~~l~~~i~~~~~~~dGiVItHGTDTleeTA~~L~~~l~-~~~kPVVlTGAmrp~~~~~sD 126 (336)
T d2ocda1 63 TPADWQLIADDIAANYDKYDGFVILHGTDTMAYTASALSFMFE-NLGKPVIVTGSQIPLADLRSD 126 (336)
T ss_dssp CHHHHHHHHHHHHHTTTTCSEEEEECCSTTHHHHHHHHHHHEE-SCCSCEEEECCSSCTTSTTCT
T ss_pred CHHHHHHHHHHHHHhhccCCCEEEEeCCchHHHHHHHHHHHhc-CCCCCEEEecccccccCcCcc
Confidence 567788887777664 68999999999999876654444433 344567665444444444444
No 52
>d1u6ka1 c.127.1.1 (A:2-283) F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=21.74 E-value=88 Score=28.54 Aligned_cols=50 Identities=22% Similarity=0.281 Sum_probs=41.4
Q ss_pred ChHHHHHHHHH----HHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEE
Q 042388 168 TPEQFKQAEET----AKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIG 217 (567)
Q Consensus 168 ~~e~~~~~~~~----l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIg 217 (567)
++|+.+++++. ++..+=|-.|+|+=|...-+=..-.|.+.+.|+++-||+
T Consensus 44 ~pe~~e~~~~~~~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~giP~ivI~ 97 (282)
T d1u6ka1 44 DPECVEAAVEMALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIG 97 (282)
T ss_dssp SHHHHHHHHHHHHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEE
T ss_pred CHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHHHHhcCCCEEEEc
Confidence 67888776665 789999999999999998888888888888887766665
No 53
>d2i4ra1 c.149.1.1 (A:4-79) V-type ATP synthase subunit F, AtpF {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.33 E-value=39 Score=25.18 Aligned_cols=20 Identities=15% Similarity=0.426 Sum_probs=16.4
Q ss_pred cCCCeEEEEEeCCCCCCchH
Q 042388 318 AGYNYGVILIPEGLIDFIPE 337 (567)
Q Consensus 318 ~gk~~gvIli~EGl~~~ipe 337 (567)
..+++|+|+|.|-+.+.+|+
T Consensus 39 ~~~digII~Ite~~a~~i~~ 58 (76)
T d2i4ra1 39 KRDDVGVVIMKQEYLKKLPP 58 (76)
T ss_dssp HCSSEEEEEEEGGGSTTSCH
T ss_pred cCCCeEEEEEeHHHHHHhhH
Confidence 35899999999998877664
No 54
>d1vp8a_ c.49.1.2 (A:) Hypothetical protein AF0103 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.11 E-value=67 Score=28.15 Aligned_cols=48 Identities=27% Similarity=0.226 Sum_probs=38.8
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecCchhHHHHHHHHHHHhcCCCCccEEEecc
Q 042388 167 ETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPK 220 (567)
Q Consensus 167 ~~~e~~~~~~~~l~~~~id~LViIGGddS~t~A~~Lae~~~~~g~~i~VIgVPK 220 (567)
.|++-++.+++.+++++|+.+|+---.|. +|.++++.+. | +++|.|.-
T Consensus 16 NT~~~l~~a~~rA~Elgi~~iVvAStsG~--TA~~~~e~~~--g--~~lvvVth 63 (190)
T d1vp8a_ 16 NTEETLRLAVERAKELGIKHLVVASSYGD--TAMKALEMAE--G--LEVVVVTY 63 (190)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSSH--HHHHHHHHCT--T--CEEEEEEC
T ss_pred cHHHHHHHHHHHHHHcCCCeEEEEeCCcH--HHHHHHHHhc--C--CeEEEEec
Confidence 46778999999999999999999876664 7888888773 4 56777764
No 55
>d7reqb2 c.23.6.1 (B:476-638) Methylmalonyl-CoA mutase beta subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]}
Probab=20.35 E-value=55 Score=27.70 Aligned_cols=14 Identities=14% Similarity=0.109 Sum_probs=8.4
Q ss_pred CCcEEEEEecCCCC
Q 042388 88 KSLKIGVVLSGGQA 101 (567)
Q Consensus 88 ~~~~IgIv~sGG~a 101 (567)
++.+|-+++.|-++
T Consensus 34 ~rP~v~la~lG~~a 47 (163)
T d7reqb2 34 ERPKVFLACLGTRR 47 (163)
T ss_dssp SCCBCEEEECSCHH
T ss_pred CCCeEEEEcCCChh
Confidence 34566677766554
No 56
>d1qcza_ c.23.8.1 (A:) N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) {Escherichia coli [TaxId: 562]}
Probab=20.07 E-value=29 Score=29.96 Aligned_cols=48 Identities=19% Similarity=0.288 Sum_probs=29.0
Q ss_pred CChHHHHHHHHHHHHcCCCEEEEecC-chhHHHHHHHHHHHhcCCCCccEEEeccc
Q 042388 167 ETPEQFKQAEETAKKLDLDGLVVIGG-DDSNTNACLLAENFRSKDMKTRVIGCPKT 221 (567)
Q Consensus 167 ~~~e~~~~~~~~l~~~~id~LViIGG-ddS~t~A~~Lae~~~~~g~~i~VIgVPKT 221 (567)
++++.+.+.++.+++.+++.+|.+=| ...+-++ ++- ....+|||||-.
T Consensus 40 Rtp~~l~~~~~~~~~~~~~ViIa~AG~aa~Lpgv--vA~-----~t~~PVIgVP~~ 88 (163)
T d1qcza_ 40 RTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGM--IAA-----KTLVPVLGVPVQ 88 (163)
T ss_dssp TCHHHHHHHHHHTTTTTCSEEEEEECSSCCHHHH--HHH-----SCSSCEEEEECC
T ss_pred cCHHHHHHHHHHHHHcCCeEEEEeccCCCcccch--hhH-----hccceeeecccc
Confidence 35677777777777777775554433 3333333 221 346799999963
No 57
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}
Probab=20.04 E-value=1.1e+02 Score=25.66 Aligned_cols=24 Identities=21% Similarity=0.238 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEecCc
Q 042388 170 EQFKQAEETAKKLDLDGLVVIGGD 193 (567)
Q Consensus 170 e~~~~~~~~l~~~~id~LViIGGd 193 (567)
+.++++++.+.+.++|.+|+.|.-
T Consensus 16 ~~l~~l~~~~~~~~~D~vli~GDl 39 (257)
T d2yvta1 16 DLLPKLKGVIAEKQPDILVVVGNI 39 (257)
T ss_dssp GGHHHHHHHHHHHCCSEEEEESCC
T ss_pred HHHHHHHHHHhhcCCCEEEEeccc
Confidence 557899999999999998777754
Done!