RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= 042388
(567 letters)
>gnl|CDD|215140 PLN02251, PLN02251, pyrophosphate-dependent phosphofructokinase.
Length = 568
Score = 1131 bits (2927), Expect = 0.0
Identities = 458/548 (83%), Positives = 489/548 (89%), Gaps = 1/548 (0%)
Query: 14 PGRLASVYSELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASGNPEEIKKLFPKLFGQPSA 73
GR ASVYSE+Q+SR++ +LPLPSVLK F +VDG PSSA+GNPEEI KLFP LFGQPS
Sbjct: 22 SGRDASVYSEVQSSRIDHALPLPSVLKGPFKIVDGPPSSAAGNPEEIAKLFPNLFGQPSV 81
Query: 74 RLVECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAG 133
LV A S ++ LKIGVVLSGGQAPGGHNVISGIFDYLQE GS LYGFKGGPAG
Sbjct: 82 MLVPSQADALS-SDQKLKIGVVLSGGQAPGGHNVISGIFDYLQEHAKGSVLYGFKGGPAG 140
Query: 134 IMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGD 193
IMKCKYVEL+ E+IYPYRNQGGFDMICSGRDKIETPEQFKQAEETA KLDLDGLVVIGGD
Sbjct: 141 IMKCKYVELTAEFIYPYRNQGGFDMICSGRDKIETPEQFKQAEETATKLDLDGLVVIGGD 200
Query: 194 DSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMT 253
DSNTNACLLAE FR+K++KTRVIGCPKTIDGDLK KEVPTSFGFDTACKI+SEMIGNVM
Sbjct: 201 DSNTNACLLAEYFRAKNLKTRVIGCPKTIDGDLKSKEVPTSFGFDTACKIYSEMIGNVMI 260
Query: 254 DARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIIC 313
DARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKK TLKNVTDYI D+IC
Sbjct: 261 DARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKLTLKNVTDYIVDVIC 320
Query: 314 KRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFE 373
KR+E GYNYGVILIPEGLIDFIPEVQ LIAELNEILAHD VD++G WKKKLK QS +LF+
Sbjct: 321 KRAELGYNYGVILIPEGLIDFIPEVQHLIAELNEILAHDVVDEEGHWKKKLKPQSLQLFD 380
Query: 374 LFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFG 433
P AIQEQL+LERDPHGNVQVAKIETEKMLIQMVETEL K KQ+G+YKG F GQSHFFG
Sbjct: 381 FLPHAIQEQLMLERDPHGNVQVAKIETEKMLIQMVETELEKRKQEGSYKGHFKGQSHFFG 440
Query: 434 YEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMD 493
YEGRCGLPTNFDA YCYALGY A ALLH+GKTGLISSVGNL PVEEWTVGGTALTSLMD
Sbjct: 441 YEGRCGLPTNFDATYCYALGYGAGALLHSGKTGLISSVGNLAAPVEEWTVGGTALTSLMD 500
Query: 494 VERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTL 553
VERRHGKFKPVIKKAMVELEG PFK FASLR++W +KN Y+SPGPIQF GP ++ NHTL
Sbjct: 501 VERRHGKFKPVIKKAMVELEGAPFKKFASLRDEWALKNRYISPGPIQFSGPGSDATNHTL 560
Query: 554 KLELGPPA 561
KLELG A
Sbjct: 561 KLELGAQA 568
>gnl|CDD|238390 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a key regulatory
enzyme in glycolysis, catalyzes the phosphorylation of
fructose-6-phosphate to fructose-1,6-biphosphate. The
members belong to a subfamily of the PFKA family
(cd00363) and include pyrophosphate-dependent
phosphofructokinases. These are found in bacteria as
well as plants. These may be dimeric nonallosteric
enzymes as in bacteria or allosteric heterotetramers as
in plants.
Length = 550
Score = 880 bits (2276), Expect = 0.0
Identities = 391/552 (70%), Positives = 458/552 (82%), Gaps = 16/552 (2%)
Query: 19 SVYSELQTSRLNVSLPLPSVLKKTFN---VVDGAPSSASGNPEEIKKLFPKLFGQPSARL 75
VYS +Q R+N + LPSVLK FN +V+G +SA+G+P+ + KLFP +GQPS
Sbjct: 1 MVYSLVQQERINYTPKLPSVLKGDFNNIKIVEGPATSAAGDPDALAKLFPGTYGQPSVAF 60
Query: 76 VECDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIM 135
V D A S LKIG+VLSGGQAPGGHNVISG+FDYL+ER GS LYGFKGGPAGI+
Sbjct: 61 VP-DQDAPS-SAPKLKIGIVLSGGQAPGGHNVISGLFDYLKERAKGSTLYGFKGGPAGIL 118
Query: 136 KCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDS 195
KC Y+EL+ EYI PYRN GGFDMICSGR KIET +QFKQAEETAKKLDLD LVVIGGDDS
Sbjct: 119 KCDYIELNAEYIQPYRNTGGFDMICSGRTKIETEDQFKQAEETAKKLDLDALVVIGGDDS 178
Query: 196 NTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDA 255
NTNA LLAENFRSK +KTRVIG PKTIDGDLK KE+ TSFGFDTA KI+SE+IGNVM DA
Sbjct: 179 NTNAALLAENFRSKGLKTRVIGVPKTIDGDLKNKEIETSFGFDTATKIYSELIGNVMRDA 238
Query: 256 RSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKR 315
RSTGKY+HFV+LMGR+ASHI LECAL+THPNI II EEV+A+KQTLKN+TDY+ D+ICKR
Sbjct: 239 RSTGKYWHFVKLMGRSASHIALECALKTHPNICIISEEVSAQKQTLKNITDYMVDVICKR 298
Query: 316 SEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFE-- 373
+E GYN+GV+L+PEGLI+FIPEV++LIAELNEILA++ V+ +G WKKKL QS +LF+
Sbjct: 299 AELGYNFGVVLVPEGLIEFIPEVKELIAELNEILANEVVEFNGLWKKKLTEQSLKLFDLL 358
Query: 374 -------LFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFN 426
LF +AIQEQL+LERDPHGNVQV++IETEK+LIQMVET L KMKQ GAYKGQF
Sbjct: 359 PKGVYLPLFIEAIQEQLMLERDPHGNVQVSRIETEKLLIQMVETRLEKMKQAGAYKGQFM 418
Query: 427 GQSHFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGT 486
GQSHFFGYEGRC P+NFDA+YCYALGY A LL++GKTG ISSVGNL PVEEWTVGG
Sbjct: 419 GQSHFFGYEGRCAFPSNFDADYCYALGYGAGVLLNSGKTGYISSVGNLAAPVEEWTVGGV 478
Query: 487 ALTSLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNA 546
LT LM++ERRHGKFKPVIKKA+V+LEG PFK FASLRE+W +KN Y+ PGP+Q+ GP+
Sbjct: 479 PLTMLMNMERRHGKFKPVIKKALVDLEGAPFKKFASLREEWALKNRYIYPGPVQYTGPSE 538
Query: 547 --NDINHTLKLE 556
++++HTL LE
Sbjct: 539 GSDELSHTLLLE 550
>gnl|CDD|131530 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosphate
1-phosphotransferase. Diphosphate--fructose-6-phosphate
1-phosphotransferase catalyzes the addition of phosphate
from diphosphate (PPi) to fructose 6-phosphate to give
fructose 1,6-bisphosphate (EC 2.7.1.90). The enzyme is
also known as pyrophosphate-dependent
phosphofructokinase. The usage of PPi-dependent enzymes
in glycolysis presumably frees up ATP for other
processes. TIGR02482 represents the ATP-dependent
6-phosphofructokinase enzyme contained within Pfam
pfam00365: Phosphofructokinase. This model hits
primarily bacterial, plant alpha, and plant beta
sequences [Energy metabolism,
Glycolysis/gluconeogenesis].
Length = 539
Score = 863 bits (2233), Expect = 0.0
Identities = 325/541 (60%), Positives = 400/541 (73%), Gaps = 9/541 (1%)
Query: 24 LQTSRLNVSLPLPSVLKKTFN---VVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDP 80
LQ SRL LP VL+ + DG P++A + EE+K+LFP +G P
Sbjct: 1 LQQSRLQYVPKLPKVLQGDTANISLEDGEPTAAVADQEELKELFPNTYGLPIITFEP--G 58
Query: 81 KACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYV 140
+A E++ LKIGV+LSGGQAPGGHNVISG+FD L++ SKLYGF GGP G++ YV
Sbjct: 59 EASPDEHQPLKIGVILSGGQAPGGHNVISGLFDALKKLNPNSKLYGFIGGPLGLLDNNYV 118
Query: 141 ELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNAC 200
EL+ E I YRN GGFD+I SGR KIET EQF +A TAKKL LDGLV+IGGDDSNTNA
Sbjct: 119 ELTKELIDTYRNTGGFDIIGSGRTKIETEEQFAKALTTAKKLKLDGLVIIGGDDSNTNAA 178
Query: 201 LLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGK 260
LLAE F +KT+VIG PKTIDGDLK + + TSFGFDTACKI+SE+IGN+ DA S K
Sbjct: 179 LLAEYFAKHGLKTQVIGVPKTIDGDLKNQFIETSFGFDTACKIYSELIGNICRDALSAKK 238
Query: 261 YYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGY 320
Y+HF+RLMGR+ASHI LECALQTHPN+ IIGEEVAAKK TL +TDYI D+I KR+ G
Sbjct: 239 YWHFIRLMGRSASHIALECALQTHPNVCIIGEEVAAKKMTLSQLTDYIADVIVKRAAKGK 298
Query: 321 NYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVD--QDGAWKKKLKSQSQELFELFPKA 378
N+GVILIPEGLI+FIPEVQ LI ELN +LA + ++ + + KL S+ LFE P+
Sbjct: 299 NFGVILIPEGLIEFIPEVQALIKELNNLLAQNVLEEGRKDNVQSKLSPSSKALFESLPEF 358
Query: 379 IQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRC 438
I+ QLLL+RDPHGNVQV++IETEK+LI++V+TELNK K++G YKG+F+ SHFFGYEGRC
Sbjct: 359 IRHQLLLDRDPHGNVQVSQIETEKLLIELVQTELNKRKKEGEYKGKFSAVSHFFGYEGRC 418
Query: 439 GLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRH 498
P+NFD++YCYALGY AA LL G TG +S++ NL P EEW GG LT +M++ERRH
Sbjct: 419 AFPSNFDSDYCYALGYTAAILLANGLTGYMSTIKNLTNPAEEWIAGGVPLTMMMNMERRH 478
Query: 499 GKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPN--ANDINHTLKLE 556
G+ KPVIKKA+V+LEG PFK FAS R+ W +++LYV PGPIQ+ GP + TL LE
Sbjct: 479 GEMKPVIKKALVDLEGKPFKKFASNRDKWALEDLYVFPGPIQYFGPEEVCDQPTLTLLLE 538
Query: 557 L 557
Sbjct: 539 Q 539
>gnl|CDD|235930 PRK07085, PRK07085, diphosphate--fructose-6-phosphate
1-phosphotransferase; Provisional.
Length = 555
Score = 813 bits (2102), Expect = 0.0
Identities = 301/551 (54%), Positives = 383/551 (69%), Gaps = 17/551 (3%)
Query: 21 YSELQTSRLNVSLPLPSVLKKTFN---VVDGAPSSASGNPEEIKKLFPKLFGQPSARLVE 77
S LQ +RL LP +L+ +VDG + + + +E+ +LFP +G P V+
Sbjct: 3 KSYLQLARLKYRPKLPKLLQNDPGLIKIVDGEFTESVADQDELAELFPNTYGLPYVTFVK 62
Query: 78 CDPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKC 137
+K LK+GV+LSGGQAPGGHNVI+G+FD L++ SKL+GF GGP G++
Sbjct: 63 GSES----SSKPLKVGVILSGGQAPGGHNVIAGLFDGLKKLNPDSKLFGFIGGPLGLLNG 118
Query: 138 KYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNT 197
KY+E++ E I YRN GGFDMI SGR KIET EQ + ET KKL LDGLV+IGGDDSNT
Sbjct: 119 KYIEITEEVIDEYRNTGGFDMIGSGRTKIETEEQKEACLETVKKLKLDGLVIIGGDDSNT 178
Query: 198 NACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARS 257
NA +LAE F KT+VIG PKTIDGDLK + + TSFGFDTA K +SEMIGN+ DA S
Sbjct: 179 NAAILAEYFAKHGCKTQVIGVPKTIDGDLKNEFIETSFGFDTATKTYSEMIGNISRDALS 238
Query: 258 TGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSE 317
KY+HF++LMGR+ASHI LECALQTHPNI +I EEVA KK +L+++ YI +I R+
Sbjct: 239 AKKYWHFIKLMGRSASHIALECALQTHPNICLISEEVAEKKMSLQDIVHYIASVIADRAA 298
Query: 318 AGYNYGVILIPEGLIDFIPEVQQLIAELNEILAH-----DGVDQDGAWK---KKLKSQSQ 369
G NYGVILIPEGLI+FIPE++ LI ELN +LA G+D + + KL +S
Sbjct: 299 KGKNYGVILIPEGLIEFIPEMKSLIKELNSLLAENESEFKGLDTEAQREYIISKLSPESA 358
Query: 370 ELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQS 429
+LF+ P+ I QLLL+RDPHGNVQV+KIETEK+LI+MV+ EL K+K +G YKG F+ S
Sbjct: 359 KLFKSLPEDIARQLLLDRDPHGNVQVSKIETEKLLIEMVKKELEKLKPEGKYKGPFSAIS 418
Query: 430 HFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALT 489
HFFGYEGR P+NFDA+YCYALGY AA L+ GKTG +S++ NL P EW G LT
Sbjct: 419 HFFGYEGRSAFPSNFDADYCYALGYTAALLILNGKTGYMSTIKNLTSPYTEWIAGAVPLT 478
Query: 490 SLMDVERRHGKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNA--N 547
+M++ERRHGK KPVIKKA+V+L+G PFK FA R+ W +++ Y PGP+Q+ GP +
Sbjct: 479 MMMNMERRHGKEKPVIKKALVDLDGPPFKYFAKYRDIWALEDSYRFPGPLQYFGPEELCD 538
Query: 548 DINHTLKLELG 558
TL LEL
Sbjct: 539 QRTLTLLLELN 549
>gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein;
Provisional.
Length = 1328
Score = 527 bits (1359), Expect = e-174
Identities = 234/466 (50%), Positives = 320/466 (68%), Gaps = 11/466 (2%)
Query: 91 KIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPY 150
+IGVVLSGGQA GGHNVI+G+ Y++ S+L+GF GGP G+ +Y EL+ + I
Sbjct: 104 RIGVVLSGGQASGGHNVIAGLMSYIKLCNQSSQLFGFLGGPEGVYSERYRELTEDDINGI 163
Query: 151 RNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKD 210
NQGGF++ICSGR KIET EQ + + E +KL L GLVVIGGDDSNTNA +LAE F+
Sbjct: 164 LNQGGFNIICSGRHKIETEEQMRASLEICEKLKLHGLVVIGGDDSNTNAAVLAEYFKRNS 223
Query: 211 MKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGR 270
T V+GCPKTIDGDLK + + TSFG+DTA K +SE IG++M ++ G Y+FVRLMGR
Sbjct: 224 SSTVVVGCPKTIDGDLKNEVIETSFGYDTAVKTYSEQIGSIMDAIKTEGYGYYFVRLMGR 283
Query: 271 AASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEG 330
+ASHITLEC LQT N+ +IGEE+ + ++L ++ D I ++I KR G +G++L+PEG
Sbjct: 284 SASHITLECGLQTRANMILIGEEIKEENRSLMSIVDEIVEMILKRDSLGKKHGIVLLPEG 343
Query: 331 LIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQE---LFELFPKAIQEQLLLER 387
LI+FIPE + LI ELN IL + K+ + S SQE LF P +Q QLLLER
Sbjct: 344 LIEFIPEFETLIKELNLILL-----KTNDRKQIIDSLSQEMKTLFLELPSDVQNQLLLER 398
Query: 388 DPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDAN 447
DPHGNVQVAKI TE++L+ M + +L ++K+ N ++H+FGYEGRC LP+NFDA+
Sbjct: 399 DPHGNVQVAKIATEELLVHMAKEKLEEVKKDYILD---NVKTHYFGYEGRCALPSNFDAS 455
Query: 448 YCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKK 507
YC+ALG+ AAAL+ ++G ++ V L E+W G LT +M++E R GK PVIKK
Sbjct: 456 YCFALGHTAAALIDNQRSGYMAVVRKLSLTPEQWEPAGCPLTYMMNIELRKGKSVPVIKK 515
Query: 508 AMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTL 553
+V+L+G + + +R +W + + Y +PGPIQF GPN+ N+ +
Sbjct: 516 YLVDLKGQSYLAYCQVRSEWKLNDYYRNPGPIQFDGPNSGITNYMI 561
Score = 182 bits (462), Expect = 1e-48
Identities = 119/556 (21%), Positives = 213/556 (38%), Gaps = 106/556 (19%)
Query: 93 GVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKG------GPAGIMKCKYVELSTEY 146
G++LS PG NVI G+ + L + +L FK G A +K +
Sbjct: 679 GLILSCLSTPGTQNVICGLVNGL---PSLKQLIVFKSLSDFYEGKA--LKVDLTSEGSLE 733
Query: 147 IYPYR-NQGGFDMICSGRDKIETPEQFKQAEETAKKL----------------------- 182
+ N GG K+ E K+ T K
Sbjct: 734 FFENSLNSGGCIFPNGVEIKMNVSE--KKYSNTTLKANDNQEFTNSSCVLSCKGLVSNDF 791
Query: 183 --------DLDGLVVIGGDDSNTNACLLAE-----NFRSKDMKTRVIGCPKTIDGDLKCK 229
++ + ++G ++ T L+E + + V+ P ++ + +
Sbjct: 792 LSQLLSFFNMRAIAIVGNSEAATFGASLSEQLICMSLNGMKSEIPVVFVPVCLENSISHQ 851
Query: 230 EVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITI 289
+ T GFD+ K S ++GN++TD+ S KY++F++++G S++ LE +QTHPN+ +
Sbjct: 852 MIETCIGFDSVTKSISTLVGNLLTDSASATKYWYFMKMIGDKTSNVALEVGIQTHPNLVV 911
Query: 290 IGEEVAAKK----------QTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQ 339
I E A K TL ++ I DIIC RS G N+G +L+ EGL D + +
Sbjct: 912 IPERYADSKLSVYGSEMAGVTLDDIITEICDIICLRSNQGNNFGGLLVSEGLFDQVYPTR 971
Query: 340 QLIAELNEILAHDGVDQDGAWKKKLKSQSQ---------ELFELFPKAIQEQLL--LERD 388
+ + + + + ++ E F+L I E+L+ L
Sbjct: 972 EYRKIFSRFSTQNLCNASNSGNCEILGSESLSRYEKKVVEDFKLIFSDIDERLIENLINS 1031
Query: 389 PHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANY 448
++ + TE +L +V+ EL + K K N F + R +P++FD+
Sbjct: 1032 R----KICDVRTEIILSALVQKELKFRRSKNKIKNGMNPVCFSFTDQVRACIPSDFDSTL 1087
Query: 449 CYALGYAAAALLHAGKT-GLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKK 507
G A+ ++++ G ++ + + ++ W + ++SLM + K
Sbjct: 1088 GLMYGMLASKIINSNLVGGYVTGIKGVLSQIDSWNMYAIPISSLMTLNIEGDKIMDSRNN 1147
Query: 508 AMVELE------------------------------GIPFKTFASLREDWTIKNLYVSPG 537
+ + E FK + E W + N Y +PG
Sbjct: 1148 SNLSFESKKLLTESTLGNAGHQLEFICKLNSVNMRNNPSFKLLMNHIEKWEVDNTYANPG 1207
Query: 538 PIQFVGPNANDINHTL 553
PIQ+ N N TL
Sbjct: 1208 PIQYFNLFKNLFNRTL 1223
>gnl|CDD|215543 PLN03028, PLN03028, pyrophosphate--fructose-6-phosphate
1-phosphotransferase; Provisional.
Length = 610
Score = 491 bits (1267), Expect = e-168
Identities = 236/553 (42%), Positives = 332/553 (60%), Gaps = 24/553 (4%)
Query: 22 SELQTSRLNVSLPLPSVLKKT---FNVVDGAPSSASGNPEEIKKLFPKLFGQPSARLVEC 78
S LQ R LP L+ T + D ++ + I + FP +GQP A +
Sbjct: 5 SGLQKLRSLYQPELPPCLQGTTVRVELGDATTAADPADAHAISRAFPHTYGQPLAHFLRA 64
Query: 79 DPK----ACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGI 134
K E+ ++++GVV G Q+PGGHNVI G+ D L+ S L GF GG G+
Sbjct: 65 TAKVPDAQVITEHPAVRVGVVFCGRQSPGGHNVIWGLHDALKAHNPNSVLLGFLGGTEGL 124
Query: 135 MKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDD 194
K +E++ + + Y+NQGG+D++ +D+I T EQ A + L LDGLV+IGG
Sbjct: 125 FAQKTLEITDDVLSTYKNQGGYDLLGRTKDQIRTTEQVNAALAACEALKLDGLVIIGGVT 184
Query: 195 SNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTD 254
SNT+A LAE F KT+V+G P T++GDLK + V T+ GFDT CK+ S++I NV TD
Sbjct: 185 SNTDAAQLAETFAEAKCKTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTD 244
Query: 255 ARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICK 314
A S KYY+F+RLMGR ASH+ LECALQ+HPN+ I+GEEVAA K TL ++T I D +
Sbjct: 245 ALSAEKYYYFIRLMGRKASHVALECALQSHPNMVILGEEVAASKLTLFDITKQICDAVQA 304
Query: 315 RSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFEL 374
R+E N+GVILIPEGLI+ IPEV L+ E++ L GV D +L + LFE
Sbjct: 305 RAEQDKNHGVILIPEGLIESIPEVYALLQEIH-GLLKQGVSVDNI-SSQLSPWASALFEF 362
Query: 375 FPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKG-QFNGQSHFFG 433
P I++QLLL + + Q+++IETEK+L Q+VETE+NK ++G YKG +FN HFFG
Sbjct: 363 LPPFIKKQLLLHPESDDSAQLSQIETEKLLAQLVETEMNKRTKEGTYKGKKFNAICHFFG 422
Query: 434 YEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMD 493
Y+ R LP+ FD +Y Y LG+ +L AG G +++V NL PV +W G +T++M
Sbjct: 423 YQARGSLPSKFDCDYAYVLGHICYHILAAGLNGYMATVTNLKSPVNKWRCGAAPITAMMS 482
Query: 494 VERRHGKF-------KPVIKKAMVELEGIPFKTFASLRED---WTIKNLYVSPGPIQFVG 543
V +R + KP I A V+L+G K + LR++ + + +LY +PGP+QF G
Sbjct: 483 V-KRWSRGPGASQIGKPAIHPAPVDLKG---KAYELLRQNASSFLMDDLYRNPGPLQFDG 538
Query: 544 PNANDINHTLKLE 556
P A+ TL +E
Sbjct: 539 PGADAKPITLCVE 551
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional.
Length = 1419
Score = 448 bits (1153), Expect = e-143
Identities = 231/538 (42%), Positives = 322/538 (59%), Gaps = 13/538 (2%)
Query: 22 SELQTSRLNVSLPLPSVLKKTFNVVD---GAPSSASGNPEEIKKLFPKLFGQPSARLVEC 78
S LQ R+ LP L + +++ G + EE+K+ L P + E
Sbjct: 107 SPLQYERIKYQPTLPKALASEYQILEENHGDDFINKKDYEEVKRFLKNLHNLPILNVKET 166
Query: 79 DPKACSMENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCK 138
+ LKIG++LSGG APGGHNVISGI+DY + S++ GF GG G+
Sbjct: 167 NNHESFKGGNVLKIGIILSGGPAPGGHNVISGIYDYAKRYNEQSQVIGFLGGIDGLYSKN 226
Query: 139 YVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTN 198
YV ++ + +RN GGF+M+ SGR K+ + E KL L+GLV+IGGD SN+N
Sbjct: 227 YVTITDSLMNRFRNLGGFNMLWSGRGKVRNKDDLIAIENIVAKLKLNGLVIIGGDGSNSN 286
Query: 199 ACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARST 258
A L++E F + + +IG PKTIDGDLK + + SFGFDTA K +SE+IGN+ TD ++
Sbjct: 287 AALISEYFAERQIPISIIGIPKTIDGDLKSEAIEISFGFDTATKTYSEVIGNLCTDVKTG 346
Query: 259 GKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEA 318
YH VR+MGR+ASH+ LECALQT PNI +IGEEV + +LK++ I + I KR
Sbjct: 347 HNVYHVVRVMGRSASHVVLECALQTRPNIVLIGEEVEKENLSLKDIVSNIVNTILKRRSL 406
Query: 319 GYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKA 378
NYGVILIPEGLI+F+PE++ LI ELN IL D KLK S+E+++ P
Sbjct: 407 NKNYGVILIPEGLIEFVPEMKILIGELNVILKEGPFDAS-----KLK-HSREVWDFLPSI 460
Query: 379 IQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRC 438
I++QLL++R+ G +QV KI TE+++I +VE+EL K+ QF +H+ GYEGRC
Sbjct: 461 IRDQLLMDRESTGYIQVGKIATERLIIVLVESELAKLNDN-NLNIQF--MAHYLGYEGRC 517
Query: 439 GLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRH 498
+P+NFD NYCYALGY AA L+ KTG +S + NL + W +M V R +
Sbjct: 518 AIPSNFDCNYCYALGYNAALLIDHKKTGYMSIIQNLEDSYANWIPAAIPFLRIMHVNRDN 577
Query: 499 -GKFKPVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPIQFVGPNANDINHTLKL 555
GK P +K+ +V+L F +R W++ +LY SPGPIQF G +N +T+K+
Sbjct: 578 TGKEFPAVKRYLVDLNSPLFNVLKEVRSLWSLYDLYRSPGPIQFNGHLSNSRCYTVKI 635
Score = 317 bits (814), Expect = 2e-95
Identities = 207/614 (33%), Positives = 310/614 (50%), Gaps = 73/614 (11%)
Query: 2 SNTNAPTVKKDGPGRLASVY------SELQTSRLNVSLPLPSVLKKTFNVVDGAPSSASG 55
N+ V + S Y SELQTSRL L LP + V S
Sbjct: 739 DVLNSEPVNNGFYEQHCSSYKSLGCMSELQTSRLYNKLELPELCSDLKAKVRAGKQYISN 798
Query: 56 NPEEIKKL---FPKLFGQPSARLVEC-DPKACSMENKSLKIGVVLSGGQAPGGHNVISGI 111
+P K++ +P + + ++ E K + + +KIG+V QAPG NV+ G+
Sbjct: 799 DPYTQKQILSNYPHMSYENKFQIQEIFHDKYATPISFEIKIGIVFLSRQAPGAMNVLCGL 858
Query: 112 FDYLQERTNGSKLYGFKG------GPAGIMKCKYVELSTEYIYPYRNQGGFDMIC-SGRD 164
+ L KL KG G G++ KY+ + + I + NQGG ++ S
Sbjct: 859 YRRL-------KL--LKGVCIAFYGLYGLLNNKYIIIDDDNIAKHVNQGGLELTGNSPEH 909
Query: 165 KIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDG 224
+ E + ET L L+GLV+ G + + T A LLAE F K + T V+G P T
Sbjct: 910 SLFDKENRNKVCETVTNLQLNGLVMPGSNVTITEAALLAEYFLEKKIPTSVVGIPLTGSN 969
Query: 225 DLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTH 284
+L + + T GFD++ K+++ +IGNV+TDA S KY+HF+RLMGR+ SH LECALQTH
Sbjct: 970 NLIHELIETCVGFDSSTKVYASLIGNVLTDAVSMPKYWHFIRLMGRSPSHEVLECALQTH 1029
Query: 285 PNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAE 344
PN+ II EE A +TL V I D++C R+E G NYG +LIP+ L+ +P ++ L++E
Sbjct: 1030 PNMVIISEEYGAADKTLWRVVQDIADVVCARAELGKNYGTVLIPDALLMHLPHMKILLSE 1089
Query: 345 LNEIL------------------------AHDGVDQDGA-----------WKKKLKSQSQ 369
+++IL H G W KL S
Sbjct: 1090 ISDILNDANEKGQLVEARNDLVNLSTTQHGHLGSTAGTVAGAEQPLSASPWVSKLTPWSL 1149
Query: 370 ELFELFPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQS 429
L + FP+ I ++LL D +++ K+ETE++L+QMV+ EL++ KQKG Y G F G +
Sbjct: 1150 ALLKTFPQFIIKELL-HVDLR-SMRFEKLETEQLLLQMVKEELHQRKQKGKYSGSFMGLT 1207
Query: 430 HFFGYEGRCGLPTNFDANYCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALT 489
HFFGY+GR LP+ FD Y+ G+AA+ ++ +G TG I S+ L +++W +
Sbjct: 1208 HFFGYQGRSSLPSEFDCKLAYSYGHAASIVIESGLTGYIVSIRGLCGNIKDWKLFAIPFI 1267
Query: 490 SLMDVERRHGKFK----------PVIKKAMVELEGIPFKTFASLREDWTIKNLYVSPGPI 539
SLM + R K PVI A V+L G +++ + W +++ + +PGPI
Sbjct: 1268 SLMKILPRGQGSKYLKSASKGDLPVIPSAPVDLNGKAYRSLKIALQKWQMEDRFCNPGPI 1327
Query: 540 QFVGPNANDINHTL 553
QF G +N N L
Sbjct: 1328 QFEGNASNYYNRIL 1341
>gnl|CDD|238216 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in
glycolysis, catalyzes the phosphorylation of
fructose-6-phosphate to fructose-1,6-biphosphate. The
members belong to PFK family that includes ATP- and
pyrophosphate (PPi)- dependent phosphofructokinases.
Some members evolved by gene duplication and thus have a
large C-terminal/N-terminal extension comprising a
second PFK domain. Generally, ATP-PFKs are allosteric
homotetramers, and PPi-PFKs are dimeric and
nonallosteric except for plant PPi-PFKs which are
allosteric heterotetramers.
Length = 338
Score = 392 bits (1009), Expect = e-133
Identities = 134/434 (30%), Positives = 177/434 (40%), Gaps = 97/434 (22%)
Query: 90 LKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYP 149
KIGV+ SGG APG + I G+ G ++YG G AG+++ EL E +
Sbjct: 1 KKIGVLTSGGDAPGMNAAIRGVVRSAIAE--GLEVYGIYEGYAGLVEGDIKELDWESVSD 58
Query: 150 YRNQGGFDMICSGRDKI-ETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRS 208
N+GG +I S R K T E +A E KK +D LVVIGGD S T A LL E + S
Sbjct: 59 IINRGGT-IIGSARCKEFRTEEGRAKAAENLKKHGIDALVVIGGDGSYTGADLLTEEWPS 117
Query: 209 KDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLM 268
K VIG P TID D+K + GFDTA K E I + A S + V +M
Sbjct: 118 KYQGFNVIGLPGTIDNDIK--GTDYTIGFDTALKTIVEAIDRIRDTASS-HQRTFVVEVM 174
Query: 269 GRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIP 328
GR I LE L T +I I EE AA + + D+I KR E G +G++
Sbjct: 175 GRHCGDIALEAGLATGADIIFIPEEPAAD-----EWEEEMVDVIKKRRERGKRHGIV--- 226
Query: 329 EGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERD 388
++AE ++
Sbjct: 227 ------------IVAEG--------------------------------------AIDFI 236
Query: 389 PHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDANY 448
P K TEK+L ++VE L F+ ++ G+ R G PT FD
Sbjct: 237 P-------KPITEKLLAKLVEERL-----------GFDTRATVLGHVQRGGTPTAFDRIL 278
Query: 449 CYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKKA 508
LG A LL G G + NL E V LT +++ +R G
Sbjct: 279 ASRLGAEAVELLLEGTGGTPVGIQNL----NENQVVRHPLTEAVNMTKRVG--------- 325
Query: 509 MVELEGIPFKTFAS 522
V+LEG PFK FA
Sbjct: 326 -VDLEGRPFKKFAK 338
>gnl|CDD|223283 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and
metabolism].
Length = 347
Score = 269 bits (689), Expect = 2e-85
Identities = 111/433 (25%), Positives = 158/433 (36%), Gaps = 89/433 (20%)
Query: 88 KSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYI 147
KI ++ SGG APG + VI + G +++G G G+++ L+ E +
Sbjct: 1 MMKKIAILTSGGDAPGMNAVIRAVVRTA--IKEGLEVFGIYNGYLGLLEGDIKPLTREDV 58
Query: 148 YPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFR 207
N+GG + + + +T E K A E KKL +D LVVIGGD S T A LLAE
Sbjct: 59 DDLINRGGTFLGSARFPEFKTEEGRKVAAENLKKLGIDALVVIGGDGSYTGAALLAEEG- 117
Query: 208 SKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRL 267
V+G PKTID D+ + + GFDTA + E I N+ A S + V +
Sbjct: 118 ----GIPVVGVPKTIDNDISGTD--FTIGFDTALETAVEAIDNLRDTASSH-ERIFIVEV 170
Query: 268 MGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILI 327
MGR A + L L T +I ILI
Sbjct: 171 MGRHAGWLALAAGLATGADI-------------------------------------ILI 193
Query: 328 PEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLLLER 387
PE +++LIAE+ G + E + +
Sbjct: 194 PE--EPADLIIEELIAEIKAKREARGKKHAII------------------VVAEGAIDQI 233
Query: 388 DPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRCGLPTNFDAN 447
+G +A IE + G F + G+ R G P+ FD
Sbjct: 234 GENGAELLAAIE----------------ELLAL--GDFETRVTVLGHIQRGGTPSAFDRV 275
Query: 448 YCYALGYAAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERRHGKFKPVIKK 507
LG AA LL GKTG + + N L +M +E IK
Sbjct: 276 LASRLGAAAVDLLLEGKTGYMVGIRNNKIVHVPIDEAVAPLKMVMSLEE----PDRSIKL 331
Query: 508 AMVELEGIPFKTF 520
+V+L F
Sbjct: 332 DLVDLAKRLGIYF 344
>gnl|CDD|235111 PRK03202, PRK03202, 6-phosphofructokinase; Provisional.
Length = 320
Score = 122 bits (309), Expect = 6e-31
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 54/281 (19%)
Query: 91 KIGVVLSGGQAPGGHNVISGIFDYLQERT---NGSKLYGFKGGPAGIMKCKYVELSTEYI 147
+IGV+ SGG APG + I + RT G ++YG G AG+++ V+L + +
Sbjct: 3 RIGVLTSGGDAPGMNAAIRAVV-----RTAISEGLEVYGIYDGYAGLLEGDIVKLDLKSV 57
Query: 148 YPYRNQGGFDMICSGRDK-IETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENF 206
N+GG ++ S R + E +A E KKL +D LVVIGGD S A L E
Sbjct: 58 SDIINRGG-TILGSARFPEFKDEEGRAKAIENLKKLGIDALVVIGGDGSYMGAKRLTE-- 114
Query: 207 RSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDA----RSTGKYY 262
VIG P TID D+ + + GFDTA N +A R T +
Sbjct: 115 ----HGIPVIGLPGTIDNDIAGTDY--TIGFDTAL--------NTAVEAIDRLRDTASSH 160
Query: 263 H---FVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAG 319
V +MGR A + L + + +I E ++ + I K E G
Sbjct: 161 ERVFIVEVMGRHAGDLALHAGIAGGAEVILIPEVPFDIEE--------LCAKIKKGRERG 212
Query: 320 YNYGVILIPEGLIDFIPEVQQLIAELNE---------ILAH 351
+ +I++ EG++ ++L E+ E +L H
Sbjct: 213 KKHAIIVVAEGVMP----AEELAKEIEERTGLETRVTVLGH 249
>gnl|CDD|233887 TIGR02483, PFK_mixed, phosphofructokinase. Members of this family
that are characterized, save one, are
phosphofructokinases dependent on pyrophosphate (EC
2.7.1.90) rather than ATP (EC 2.7.1.11). The exception
is one of three phosphofructokinases from Streptomyces
coelicolor. Family members are both bacterial and
archaeal [Energy metabolism,
Glycolysis/gluconeogenesis].
Length = 324
Score = 110 bits (277), Expect = 1e-26
Identities = 73/259 (28%), Positives = 112/259 (43%), Gaps = 54/259 (20%)
Query: 91 KIGVVLSGGQAPGGHNVISGIFDY-LQERTNGSKLYGFKGGPAGIMKCKYVEL----STE 145
+IGV+ GG PG + VI G+ + E G ++ G + G G+++ V L
Sbjct: 1 RIGVLTGGGDCPGLNAVIRGVVRRAIAEY--GWEVIGIRDGWRGLLEGDTVPLLDLEDVR 58
Query: 146 YIYPYRNQGG----------FDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDS 195
I P +GG F G DKI K+L LD L+ IGGD +
Sbjct: 59 GILP---RGGTILGSSRTNPFKYEEDGDDKIV---------ANLKELGLDALIAIGGDGT 106
Query: 196 NTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDA 255
A LA+ V+G PKTID DL+ + +FGFDTA +I +E + + T A
Sbjct: 107 LGIARRLADK------GLPVVGVPKTIDNDLEATDY--TFGFDTAVEIATEALDRLHTTA 158
Query: 256 RSTGKYYH----FVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDI 311
S H V +MGR A I L + ++ +I E + +V + +
Sbjct: 159 ES-----HHRVMVVEVMGRHAGWIALHSGIAGGADVILIPE----IPFDIDSVCEKVR-- 207
Query: 312 ICKRSEAGYNYGVILIPEG 330
+R G + ++++ EG
Sbjct: 208 --ERFARGKRFAIVVVAEG 224
>gnl|CDD|213713 TIGR02482, PFKA_ATP, 6-phosphofructokinase. 6-phosphofructokinase
(EC 2.7.1.11) catalyzes the addition of phosphate from
ATP to fructose 6-phosphate to give fructose
1,6-bisphosphate. This represents a key control step in
glycolysis. This model hits bacterial ATP-dependent
6-phosphofructokinases which lack a beta-hairpin loop
present in TIGR02483 family members. TIGR02483 contains
members that are ATP-dependent as well as members that
are pyrophosphate-dependent. TIGR02477 represents the
pyrophosphate-dependent phosphofructokinase,
diphosphate--fructose-6-phosphate 1-phosphotransferase
(EC 2.7.1.90) [Energy metabolism,
Glycolysis/gluconeogenesis].
Length = 301
Score = 100 bits (250), Expect = 3e-23
Identities = 73/243 (30%), Positives = 117/243 (48%), Gaps = 20/243 (8%)
Query: 91 KIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPY 150
KIG++ SGG APG + I + +G ++YG + G G++ K L ++ +
Sbjct: 1 KIGILTSGGDAPGMNAAIRAVVRT--AIYHGFEVYGIRRGYKGLINGKIEPLESKNVSGI 58
Query: 151 RNQGGFDMICSGR-DKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSK 209
++GG ++ + R + +T E ++A E KKL ++GLVVIGGD S T A L E
Sbjct: 59 IHRGG-TILGTARCPEFKTEEVREKAVENLKKLGIEGLVVIGGDGSYTGAQKLYEEGGIP 117
Query: 210 DMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMG 269
VIG P TID D+ + + GFDTA + + + A S + + + +MG
Sbjct: 118 -----VIGLPGTIDNDIPGTD--YTIGFDTALNTIIDAVDKIRDTATSHERAF-VIEVMG 169
Query: 270 RAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPE 329
R A + L + T I II E D + + ++ EAG + +I++ E
Sbjct: 170 RHAGDLALYAGIATGAEIIIIPE--------FDYDIDELIQRLKEQHEAGKKHSIIIVAE 221
Query: 330 GLI 332
G I
Sbjct: 222 GNI 224
>gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase.
Length = 279
Score = 96.3 bits (240), Expect = 4e-22
Identities = 74/263 (28%), Positives = 113/263 (42%), Gaps = 22/263 (8%)
Query: 91 KIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPY 150
KIGV+ SGG APG + I + G ++YG G AG++ +L E +
Sbjct: 2 KIGVLTSGGDAPGMNAAIRAVVR--SAIAEGLEVYGIYEGYAGLVAGNIKQLDWESVSDI 59
Query: 151 RNQGGFDMICSGRDK-IETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSK 209
+GG I S R E +A E KK +D LVVIGGD S T A LL
Sbjct: 60 IQRGG-TFIGSARCPEFREREGRLKAAENLKKHGIDALVVIGGDGSYTGADLLTS----- 113
Query: 210 DMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMG 269
+ +G P TID D+ + + GFDTA E I + A S + + V +MG
Sbjct: 114 EHGFNCVGLPGTIDNDICGTDY--TIGFDTALNTIVEAIDRIRDTASSHQRTF-VVEVMG 170
Query: 270 RAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPE 329
R + L + + I E A + + + + + + E G + ++++ E
Sbjct: 171 RHCGDLALVAGIAGGADYIFIPE--APFWE------EELCNRLKRGRERGKRHNIVIVAE 222
Query: 330 GLIDFIPEVQQLIAELNEILAHD 352
G ID P + + +L +D
Sbjct: 223 GAID--PITSEFVKKLVVEGGYD 243
>gnl|CDD|238388 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory
enzyme in glycolysis, catalyzes the phosphorylation of
fructose-6-phosphate to fructose-1,6-biphosphate. The
members belong to a subfamily of the PFKA family
(cd00363) and include bacterial ATP-dependent
phosphofructokinases. These are allosrterically
regulated homotetramers; the subunits are of about 320
amino acids.
Length = 317
Score = 94.8 bits (236), Expect = 2e-21
Identities = 73/263 (27%), Positives = 113/263 (42%), Gaps = 25/263 (9%)
Query: 91 KIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPY 150
+IGV+ SGG APG + I G+ G ++YG + G AG++ V L +
Sbjct: 2 RIGVLTSGGDAPGMNAAIRGVVR--SAIAEGLEVYGIRDGYAGLIAGDIVPLDRYSVSDI 59
Query: 151 RNQGGFDMICSGR-DKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFRSK 209
N+GG + S R + + E +A E KK +D LVVIGGD S A L E
Sbjct: 60 INRGG-TFLGSARFPEFKDEEGQAKAIEQLKKHGIDALVVIGGDGSYMGAMRLTE----- 113
Query: 210 DMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMG 269
+G P TID D+ + + GFDTA E I + + S + V +MG
Sbjct: 114 -HGFPCVGLPGTIDNDIPGTDY--TIGFDTALNTVVEAIDRIRDTSSSHQRIS-VVEVMG 169
Query: 270 RAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPE 329
R I L + +I E +++ + + I E G + ++++ E
Sbjct: 170 RHCGDIALAAGIAGGAEFIVIPEAEFDREE--------VANRIKAGIERGKKHAIVVVAE 221
Query: 330 GLIDFIPEVQQLIAELNEILAHD 352
G+ D V +L E+ E +
Sbjct: 222 GVYD----VDELAKEIEEATGFE 240
>gnl|CDD|185539 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Provisional.
Length = 459
Score = 84.7 bits (210), Expect = 2e-17
Identities = 65/244 (26%), Positives = 107/244 (43%), Gaps = 17/244 (6%)
Query: 88 KSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYI 147
K +K G+V GG PG + VI + L +YG K G G+ K +++L + +
Sbjct: 86 KEVKAGIVTCGGLCPGLNVVIRELVMNLINNYGVKTIYGAKYGYKGLYKEDWIKLDPKDV 145
Query: 148 YPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENFR 207
GG + S K +T + ++ L +GGD ++ A + + R
Sbjct: 146 KTIHRLGGTILGSS-----RGGFDPKVMVDTLIRHGINILFTLGGDGTHRGALAIYKELR 200
Query: 208 SKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRL 267
+ + V+G PKTID D+ + SFGF TA + I +A+S V+L
Sbjct: 201 RRKLNISVVGIPKTIDNDIPIID--ESFGFQTAVEEAQNAIRAAYVEAKSAKNGVGIVKL 258
Query: 268 MGRAASHITLECALQT-HPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVIL 326
MGR + I L ++ + N+ +I E L+ V +YI + K+ VI+
Sbjct: 259 MGRDSGFIALHASVASADVNVCLIPE----FDIPLEGVLEYIEQRLQKKGHC-----VIV 309
Query: 327 IPEG 330
+ EG
Sbjct: 310 VAEG 313
>gnl|CDD|235869 PRK06830, PRK06830, diphosphate--fructose-6-phosphate
1-phosphotransferase; Provisional.
Length = 443
Score = 74.1 bits (183), Expect = 5e-14
Identities = 64/207 (30%), Positives = 97/207 (46%), Gaps = 11/207 (5%)
Query: 90 LKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAG-IMKCKY--VELSTEY 146
+K +V GG PG ++VI I L ++ G + G G I + + VEL+ E
Sbjct: 81 VKAAIVTCGGLCPGLNDVIRAIVLELHHHYGVRRILGIRYGYQGLIPRYGHDPVELTPEV 140
Query: 147 IYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLAENF 206
+ GG ++ S R + PE+ E +++++ L VIGGD + A +AE
Sbjct: 141 VADIHEFGG-TILGSSRGPQD-PEEIVDTLE---RMNINILFVIGGDGTLRGASAIAEEI 195
Query: 207 RSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVR 266
+ +K VIG PKTID D+ + SFGF+TA + +E I +A V+
Sbjct: 196 ERRGLKISVIGIPKTIDNDINF--IQKSFGFETAVEKATEAIRCAHVEANGAPNGIGLVK 253
Query: 267 LMGRAASHITLECAL-QTHPNITIIGE 292
LMGR + I AL N +I E
Sbjct: 254 LMGRHSGFIAAYAALASKDVNFVLIPE 280
>gnl|CDD|184487 PRK14071, PRK14071, 6-phosphofructokinase; Provisional.
Length = 360
Score = 67.4 bits (165), Expect = 4e-12
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 33/253 (13%)
Query: 91 KIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMK--CKYVELSTEYIY 148
+IG++ SGG G + VI + + T G ++ G + G+M +Y+EL + +
Sbjct: 6 RIGILTSGGDCAGLNAVIRAVV-HRARGTYGWEVIGIRDATQGLMARPPQYIELDLDQVD 64
Query: 149 PYRNQGGFDMICSGRDKIETPEQFKQAEETAK-----------KLDLDGLVVIGGDDSNT 197
GG + G P F + + + L LD L+ IGGD S
Sbjct: 65 DLLRMGGTIL---GTTNKGDPFAFPMPDGSLRDRSQEIIDGYHSLGLDALIGIGGDGS-- 119
Query: 198 NACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARS 257
+L + + ++G PKTID D+ EV S GFDTA I +E + + A S
Sbjct: 120 -LAILRRLAQQGGIN--LVGIPKTIDNDVGATEV--SIGFDTAVNIATEALDRLHFTAAS 174
Query: 258 TGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSE 317
+ + +MGR A HI L + ++ +I E TL+NV I +R E
Sbjct: 175 HNRVM-ILEVMGRDAGHIALAAGIAGGADVILIPE----IPYTLENV----CKKIRERQE 225
Query: 318 AGYNYGVILIPEG 330
G N+ ++++ E
Sbjct: 226 EGKNFCLVVVSEA 238
>gnl|CDD|178472 PLN02884, PLN02884, 6-phosphofructokinase.
Length = 411
Score = 66.0 bits (161), Expect = 1e-11
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 86 ENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMK--CKYVELS 143
E + +K +V GG PG ++VI I L E + G G G + + LS
Sbjct: 50 EPEEVKAAIVTCGGLCPGLNDVIRQIVFTL-EIYGVKNIVGIPFGYRGFFEKGLSEMPLS 108
Query: 144 TEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLLA 203
+ + GG ++ R +T + E ++ L V+GG+ ++ A +
Sbjct: 109 RKVVQNIHLSGG-SLLGVSRGGAKTSDIVDSIEARG----INMLFVLGGNGTHAGANAIH 163
Query: 204 ENFRSKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYH 263
R + MK V+G PKTID D+ + +FGFDTA + I + +A S YH
Sbjct: 164 NECRKRKMKVSVVGVPKTIDNDILLMD--KTFGFDTAVEEAQRAINSAYIEAHSA---YH 218
Query: 264 ---FVRLMGRAASHITLECALQT-HPNITIIGE 292
V+LMGR++ I + +L + +I +I E
Sbjct: 219 GIGLVKLMGRSSGFIAMHASLASGQVDICLIPE 251
>gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase.
Length = 484
Score = 61.7 bits (150), Expect = 4e-10
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 94 VVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQ 153
+V GG PG + VI I L +++ G GG G + L+ + + +
Sbjct: 92 IVTCGGLCPGLNTVIREIVCGLSYMYGVTRILGIDGGYRGFYSRNTIPLTPKVVNDIHKR 151
Query: 154 GGFDMICSGRDKIETPEQFKQAEETAKKLD------LDGLVVIGGDDSNTNACLLAENFR 207
GG ++ + R +T+K +D ++ + +IGGD + A ++ E R
Sbjct: 152 GG-TILGTSRG----------GHDTSKIVDSIQDRGINQVYIIGGDGTQKGASVIYEEIR 200
Query: 208 SKDMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRL 267
+ +K V G PKTID D+ + SFGFDTA + I +A S V+L
Sbjct: 201 RRGLKVAVAGIPKTIDNDIPV--IDKSFGFDTAVEEAQRAINAAHVEAESVENGIGLVKL 258
Query: 268 MGRAASHITLECAL 281
MGR + I + L
Sbjct: 259 MGRYSGFIAMYATL 272
>gnl|CDD|237600 PRK14072, PRK14072, 6-phosphofructokinase; Provisional.
Length = 416
Score = 57.9 bits (141), Expect = 5e-09
Identities = 89/403 (22%), Positives = 147/403 (36%), Gaps = 106/403 (26%)
Query: 123 KLYGFKGGPAGIMKCKYVELSTE---YIYPYRNQ--GGFDMICSGRDKIETPEQFKQAE- 176
K+YG + G GI+ ++LS E + + G S R K+++ E+ +AE
Sbjct: 37 KVYGARNGIIGILDEDLIDLSKESDEALAALAHTPSGALG---SCRYKLKSLEE-DRAEY 92
Query: 177 ----ETAKKLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVP 232
E K D+ GG+DS A +++ + R IG PKTID DL +
Sbjct: 93 ERLLEVFKAHDIGYFFYNGGNDSMDTALKVSQLAKKMGYPIRCIGIPKTIDNDLPGTD-- 150
Query: 233 TSFGFDTACKIFSEMIGNVMTDARS---TGKYYHFVRLMGRAASHITLECALQTHPNITI 289
GF +A K + + D + T K + + +MGR A + AL
Sbjct: 151 HCPGFGSAAKYIATSVLEAALDVAAMANTSKVF-ILEVMGRHAGWLAAAAAL-------- 201
Query: 290 IGEEVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEIL 349
A + D + I +PE F + ++ +A++ I+
Sbjct: 202 -----AKQNP------DDAPHL-------------IYLPE--RPF--DEEKFLADVRAIV 233
Query: 350 AHDG----------VDQDGAWKKKLKSQSQELFELFPKAIQEQLLLERDPHGNVQ---VA 396
G D DG K I E L D G+ Q VA
Sbjct: 234 KRYGYCVVVVSEGIRDADG------------------KFIAEA-GLAEDAFGHAQLGGVA 274
Query: 397 KIETEKMLIQMVETELNKMKQKGAYKGQFNGQSHFFGYEGRC--GLPTNFDANYCYALGY 454
+L +++ +L K K A Y R + + D YA+G
Sbjct: 275 -----PVLANLIKEKLGK-KVHWA----------VLDYLQRAARHIASKTDVEEAYAVGK 318
Query: 455 AAAALLHAGKTGLISSVGNLGEPVEEWTVGGTALTSLMDVERR 497
AA AGK G++ ++ + +W +G L+ + + E++
Sbjct: 319 AAVEYALAGKNGVMPAIRRTSDDPYKWKIGLVPLSKVANKEKK 361
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type.
Members of this family are eukaryotic (with one
exception) ATP-dependent 6-phosphofructokinases (EC
2.7.1.11) in which two tandem copies of the
phosphofructokinase are found. Members are found, often
including several isozymes, in animals and fungi and in
the bacterium Propionibacterium acnes KPA171202 (a human
skin commensal).
Length = 746
Score = 52.7 bits (127), Expect = 4e-07
Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 53/274 (19%)
Query: 91 KIGVVLSGGQAPGGHNVI-----SGIFDYLQERTNGSKLY----GFKG---GPAGIMKCK 138
+I V+ SGG A G + + I+ G ++Y G++G G I
Sbjct: 2 RIAVLTSGGDAQGMNAAVRAVVRMAIY-------VGCRVYAIREGYQGLVDGGDNI---- 50
Query: 139 YVELSTEYIYPYRNQGGFDMICSGRDK--IETPEQFKQAEETAKKLDLDGLVVIGGDDSN 196
E E + + GG +I + R K E P + K A +D LVVIGGD S
Sbjct: 51 -EEAQWEDVRGILSLGG-TIIGTARCKEFRERPGRLKAARNLVSN-GIDALVVIGGDGSL 107
Query: 197 TNA--------CLLAENFRSKDMKTRV---------IGCPKTIDGDLKCKEVPTSFGFDT 239
T A LL E + + +G +ID D + G D+
Sbjct: 108 TGADLFREEWPSLLEELVDTGKITAEQAEEHRHLTIVGLVGSIDND--MCGTDMTIGADS 165
Query: 240 ACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQ 299
A E I + + A+S + + V +MGR ++ L A+ T + I E
Sbjct: 166 ALHRICEAIDAISSTAQSHQRAF-VVEVMGRHCGYLALMAAIATGADYVFIPERPPE--- 221
Query: 300 TLKNVTDYITDIICKRSEAGYNYGVILIPEGLID 333
+ D + + + +AG ++++ EG ID
Sbjct: 222 --EGWEDQLCHKLKRNRKAGKRKTIVIVAEGAID 253
Score = 42.7 bits (101), Expect = 4e-04
Identities = 55/266 (20%), Positives = 100/266 (37%), Gaps = 23/266 (8%)
Query: 86 ENKSLKIGVVLSGGQAPGGHNVISGIFDYLQERTNGSKLYGFKGGPAGIMKCKYVELSTE 145
E L+I ++ G A G + Y R G + G +G+ + EL+
Sbjct: 386 EASRLRIAIIHVGAPAGGMNAATRSAVRYALAR--GHTVIAIHNGFSGLARHDVRELTWS 443
Query: 146 YIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAKKLD---LDGLVVIGGDDSNTNACLL 202
+ + +GG + + R P A +DGL++IGG ++ L
Sbjct: 444 DVEGWVGEGG-SELGTNR---SLPG--DDLGTIAYYFQQHKIDGLIIIGGFEAFEALYQL 497
Query: 203 AENFRSKDMKTRV--IGCPKTIDGDLKCKEVPTSFGFDTACKIFSEMIGNVMTDARSTGK 260
R K R+ + P TI ++ E S G DTA +E N+ A ++ +
Sbjct: 498 DAA-REKYPAFRIPMVVIPATISNNVPGTEY--SLGSDTALNEITEYCDNIKQSASASKR 554
Query: 261 YYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTLKNVTDYITDIICKRSEAGY 320
V MG + ++ L T + I EE + K +++ +++ + G
Sbjct: 555 RVFVVETMGGYSGYLATMAGLATGADAAYIPEEGISLKDLQEDI-EHLKE----TFAEGR 609
Query: 321 NYGVILIPEGLIDFI--PEVQQLIAE 344
+IL E + ++I+E
Sbjct: 610 AGKLILRNEKASKVYTTDFIARIISE 635
>gnl|CDD|180620 PRK06555, PRK06555, pyrophosphate--fructose-6-phosphate
1-phosphotransferase; Validated.
Length = 403
Score = 51.2 bits (123), Expect = 7e-07
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 179 AKKLDLDGLVV---IGGDDSNTNACLLAENFRSKDMKTRVIGCPKTIDGDLKCKEVP--T 233
A++L DG+ + IGGDD+NT A LA V+G PKTID D+ VP
Sbjct: 105 AERLAADGVDILHTIGGDDTNTTAADLAAYLAENGYDLTVVGLPKTIDNDV----VPIRQ 160
Query: 234 SFGFDTACKIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECA 280
S G TA + + NV+ + + + +MGR +T A
Sbjct: 161 SLGAWTAAEQGARFFDNVINEHSANPRMLIIHEVMGRNCGWLTAATA 207
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory
enzyme in glycolysis, catalyzes the phosphorylation of
fructose-6-phosphate to fructose-1,6-biphosphate. The
members belong to a subfamily of the PFKA family
(cd00363) and include eukaryotic ATP-dependent
phosphofructokinases. These have evolved from the
bacterial PFKs by gene duplication and fusion events and
exhibit complex allosteric behavior.
Length = 762
Score = 47.9 bits (114), Expect = 1e-05
Identities = 65/272 (23%), Positives = 108/272 (39%), Gaps = 49/272 (18%)
Query: 91 KIGVVLSGGQAPGGHN-----VISGIFDYLQERTNGSKLYGFKGGPAGIMKC-KYV-ELS 143
I V+ SGG A G + V GI+ G+K++ G G++K Y+ +
Sbjct: 5 AIAVLTSGGDAQGMNAAVRAVVRMGIY-------VGAKVFFVYEGYEGLVKGGDYIKQAE 57
Query: 144 TEYIYPYRNQGGFDMICSGRDK-IETPEQFKQAEETAKKLDLDGLVVIGGDDSNTNACLL 202
E + + +GG +I S R K E QA + + L VIGGD S T A L
Sbjct: 58 WESVSNWLQEGG-TIIGSARCKEFREREGRLQAAYNLIQRGITNLCVIGGDGSLTGADL- 115
Query: 203 AENFRS----------------KDMKTR-----VIGCPKTIDGDLKCKEVPTSFGFDTAC 241
FRS ++ + ++G +ID D ++ + G D+A
Sbjct: 116 ---FRSEWPSLLEELVKDGKITEEEVAKYQHLNIVGMVGSIDNDFCGTDM--TIGTDSAL 170
Query: 242 KIFSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQTL 301
E++ + T A+S + + + +MGR ++ L L T + I E
Sbjct: 171 HRICEVVDAITTTAQSHQRTF-VLEVMGRHCGYLALVSGLATGADWIFIPERPPEDGW-- 227
Query: 302 KNVTDYITDIICKRSEAGYNYGVILIPEGLID 333
D + + + G +I++ EG ID
Sbjct: 228 ---EDQMCRRLSEHRSRGKRLNIIIVAEGAID 256
Score = 32.9 bits (75), Expect = 0.52
Identities = 32/151 (21%), Positives = 60/151 (39%), Gaps = 8/151 (5%)
Query: 121 GSKLYGFKGGPAGIMKCKYVELSTEYIYPYRNQGGFDMICSGRDKIETPEQFKQAEETAK 180
G + Y G G+ K + VEL + + +GG ++ G + + + +
Sbjct: 419 GHRPYAIYDGFEGLAKGQIVELGWIDVGGWTGRGGSEL---GTKRTLPKKDLETIAYNFQ 475
Query: 181 KLDLDGLVVIGGDDSNTNACLLAENFRSKDMKTRVIGC--PKTIDGDLKCKEVPTSFGFD 238
K +DGL+++GG ++ L E R + + + P T+ ++ + S G D
Sbjct: 476 KYGIDGLIIVGGFEAYKGLLQLREA-REQYEEFCIPMVLIPATVSNNVPGTDF--SLGSD 532
Query: 239 TACKIFSEMIGNVMTDARSTGKYYHFVRLMG 269
TA + + A T + V MG
Sbjct: 533 TALNALMKYCDRIKQSASGTKRRVFIVETMG 563
>gnl|CDD|237042 PRK12291, PRK12291, apolipoprotein N-acyltransferase; Reviewed.
Length = 418
Score = 33.4 bits (77), Expect = 0.35
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 311 IICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHDGVDQDGAWKKK-LKSQSQ 369
+ K + GV+L+ +DF P + +N L + + QD W K+ LKS
Sbjct: 162 LYKKYKKKYKIIGVLLLL-FALDFKPFKTSDLPLVNIELVNTNIPQDLKWDKENLKSIIN 220
Query: 370 ELFELFPKAIQEQ 382
E + KAI E+
Sbjct: 221 ENLKEIDKAIDEK 233
>gnl|CDD|225233 COG2358, Imp, TRAP-type uncharacterized transport system,
periplasmic component [General function prediction
only].
Length = 321
Score = 31.5 bits (72), Expect = 0.99
Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 284 HPNITIIGEEVAAK-KQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLI 342
PN I E+A L ++ + I K E Y IP G I E +
Sbjct: 196 VPNPAI--SELATTCDIVLVPISG---EEIDKLEEKYPYYAKATIPAGTYPGIDEDIPTV 250
Query: 343 AELNEILAHDGVDQDGAWK 361
A ++ D V +D +K
Sbjct: 251 AVAAILVTSDDVSEDLVYK 269
>gnl|CDD|222160 pfam13476, AAA_23, AAA domain.
Length = 204
Score = 31.0 bits (70), Expect = 1.2
Identities = 25/129 (19%), Positives = 57/129 (44%), Gaps = 10/129 (7%)
Query: 293 EVAAKKQTLKNVTDYITDIICKRSEAGYNYGVILIPEGLIDFIPEVQQLIAELNEILAHD 352
E K L+ + + K + + I+ + L +FI E+ + E+ +L +
Sbjct: 81 ENNKGKLKLRLIEESRELTKKKGKKVKKSILEIVEIDELQEFIDELLKSDKEILPLLLYL 140
Query: 353 GVDQDGAWKKKLKSQSQELFEL---FPKAIQEQLLLERDPHGNVQVAKIETEKMLIQMVE 409
G ++ K K K + + L EL + E+ LLE ++ + + +K ++ ++
Sbjct: 141 GQERLEELKFKRKEKKERLEELEKELEELEDEKDLLE-------KLLEEKEKKKELEELK 193
Query: 410 TELNKMKQK 418
EL ++ ++
Sbjct: 194 EELEELLEE 202
>gnl|CDD|235007 PRK02134, PRK02134, hypothetical protein; Provisional.
Length = 249
Score = 31.1 bits (71), Expect = 1.2
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 258 TGKYYHFVRLMGRAASHITLECALQTHPNITIIGEEVAAKKQ 299
+Y F+ L GR +H+ + P I I AA+
Sbjct: 106 AAQYERFLSLFGRKPTHLDSHHHVHMLPQIFPIVARFAAEYG 147
>gnl|CDD|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and
chromosome partitioning].
Length = 1163
Score = 30.8 bits (70), Expect = 2.4
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 19/73 (26%)
Query: 37 SVLKKTFNVVDGAPSSASGNPEEIKKLFPKLFGQPSARLVECDPKA---CSME------N 87
K+TF+ ++ E ++F +LFG +A L +P +E
Sbjct: 1009 ERFKETFDKIN----------ENFSEIFKELFGGGTAELELTEPDDPLTAGIEISARPPG 1058
Query: 88 KSLKIGVVLSGGQ 100
K L+ +LSGG+
Sbjct: 1059 KKLQSLSLLSGGE 1071
>gnl|CDD|234032 TIGR02855, spore_yabG, sporulation peptidase YabG. Members of this
family are the protein YabG, demonstrated for Bacillus
subtilis to be an endopeptidase able to release
N-terminal peptides from a number of sporulation
proteins, including CotT, CotF, and SpoIVA. It appears
to be expressed under control of sigma-K [Cellular
processes, Sporulation and germination].
Length = 283
Score = 29.6 bits (67), Expect = 4.0
Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 384 LLERDPHGNVQVAKIETEKMLIQMVETELNKMKQKGAYK--GQFNGQSHFFGYEGRCGLP 441
L++ + E + ++ + MK+K Y+ G + +FG GR L
Sbjct: 51 LVDESERKKRKKRFKERMETSYRLFRQDYKLMKEKKEYRATGGYKNNQLYFGMPGRV-LH 109
Query: 442 TNFDANY 448
+ D Y
Sbjct: 110 IDGDPEY 116
>gnl|CDD|235416 PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid;
Reviewed.
Length = 436
Score = 29.7 bits (68), Expect = 4.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Query: 280 ALQTHPNITIIGEEVAA 296
AL+ HP IT+I EEV
Sbjct: 108 ALENHPLITVIREEVTE 124
>gnl|CDD|238693 cd01399, GlcN6P_deaminase, GlcN6P_deaminase:
Glucosamine-6-phosphate (GlcN6P) deaminase subfamily;
GlcN6P deaminase catalyzes the reversible conversion of
GlcN6P to D-fructose-6-phosphate (Fru6P) and ammonium.
The reaction is an aldo-keto isomerization coupled with
an amination or deamination. It is the last step of the
metabolic pathway of N-acetyl-D-glucosamine-6-phosphate
(GlcNAc6P). GlcN6P deaminase is a hexameric enzyme that
is allosterically activated by GlcNAc6P.
Length = 232
Score = 29.4 bits (67), Expect = 4.3
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 280 ALQTHPNITIIGEEVAAKK 298
LQ HPN+T+I +E AA +
Sbjct: 213 ILQLHPNVTVILDEAAASE 231
>gnl|CDD|236835 PRK11069, recC, exonuclease V subunit gamma; Provisional.
Length = 1122
Score = 29.1 bits (66), Expect = 7.7
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 7/68 (10%)
Query: 337 EVQQLIAELNEILAHDGVDQDGAWKKKLKSQSQELFELFPKAIQEQLL---LERDPHGNV 393
E LIAEL LA + Q W++ L +Q + L E P + QLL D
Sbjct: 552 ESSGLIAELAGHLAS-LLMQLNIWRRGL-AQPRPLEEWLP--VCRQLLDDFFLPDAETEA 607
Query: 394 QVAKIETE 401
+A IE +
Sbjct: 608 ALALIEQQ 615
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.316 0.135 0.398
Gapped
Lambda K H
0.267 0.0722 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 28,944,501
Number of extensions: 2866730
Number of successful extensions: 2779
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2696
Number of HSP's successfully gapped: 50
Length of query: 567
Length of database: 10,937,602
Length adjustment: 102
Effective length of query: 465
Effective length of database: 6,413,494
Effective search space: 2982274710
Effective search space used: 2982274710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (27.7 bits)