BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042392
(436 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/151 (43%), Positives = 90/151 (59%), Gaps = 7/151 (4%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
LGRG + Y C + T PYA K + K K ++R EI + LS PNI++L
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKK------IVRTEIGVLLRLS-HPNIIKL 113
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
K E T + +V+EL GG+LFDRI+ KGYYSERDAA ++ I+ AV H G++HRD
Sbjct: 114 KEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRD 173
Query: 153 LKPENFCFISRDDNALLKVTDFGSALLFEEE 183
LKPEN + + +A LK+ DFG + + E +
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 205/447 (45%), Gaps = 58/447 (12%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y + LG G +G LC + T++ A K + +K + + N ++ E+ + +LL
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIK-IIRKTSVSTSSNSKLLE-EVAVLKLLD-H 95
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI++L ED+ ++VME +GG+LFD II + ++E DAA +++ +++ V H
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH 155
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE------EEGGEASDDTSVILRMKQF 200
++HRDLKPEN S++ +AL+K+ DFG + +FE E G A +LR K
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYD 215
Query: 201 RR--MSKLKKLTVKVIVEYLP--GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSM 256
+ + + + ++ Y P G+ Q + K +E + + + G +
Sbjct: 216 EKCDVWSIGVILFILLAGYPPFGGQTDQEILRK-VEKGKYTFDSPEWKNVSEGAKDLIKQ 274
Query: 257 LTEFDVKQLMEAADM-----------DGNGAIDYTEFTAATIQRQKLERSEYLSKA---- 301
+ +FD ++ + A I+ A +K + S+ L++A
Sbjct: 275 MLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLY 334
Query: 302 -----------------FQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNT 344
F++ DK+ G ++ + I S + ++ F L
Sbjct: 335 MASKLTSQEETKELTDIFRHIDKNGDG------QLDRQELIDGYSKLSGEEVAVFDLPQI 388
Query: 345 KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFI 404
+ + + ++ D D NG ID+ EFV + D L + + LE AFQ D++ + I
Sbjct: 389 E-----SEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKI 443
Query: 405 TVNELETAFKENNMGDDATIKEIISEV 431
+V+EL + F +++ + T KE+IS +
Sbjct: 444 SVDELASVFGLDHL-ESKTWKEMISGI 469
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 181 EEEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNG 239
+E G E + I M++F+ KL + + + L EET+ L + F +D + +G
Sbjct: 302 KESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDG 361
Query: 240 TLSYDELRAGLTKV-GSMLTEFDVKQL-------MEAADMDGNGAIDYTEFTAATIQRQK 291
L EL G +K+ G + FD+ Q+ + AAD D NG IDY+EF + R+
Sbjct: 362 QLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKS 421
Query: 292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMN 351
L + L AFQ FD+D +G + V+ ++ + H+ +
Sbjct: 422 LLSKDKLESAFQKFDQDGNG----KISVDELASVFGLDHLES-----------------K 460
Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLM 377
K+++ D + +G++DF EF ++
Sbjct: 461 TWKEMISGIDSNNDGDVDFEEFCKMI 486
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
D+ +Y+ +GRG +G + + T + A K + K + E+ ++EI+I +
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY----FVEDVDRFKQEIEIMK 78
Query: 82 LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
L PNI+ L ED T +++VMELC GG+LF+R++ K + E DAA +++ +++AV
Sbjct: 79 SLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA 137
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
CH + V HRDLKPENF F++ ++ LK+ DFG A F+
Sbjct: 138 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 177
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 96/160 (60%), Gaps = 5/160 (3%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
D+ +Y+ +GRG +G + + T + A K + K + E+ ++EI+I +
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY----FVEDVDRFKQEIEIMK 61
Query: 82 LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
L PNI+ L ED T +++VMELC GG+LF+R++ K + E DAA +++ +++AV
Sbjct: 62 SLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVA 120
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
CH + V HRDLKPENF F++ ++ LK+ DFG A F+
Sbjct: 121 YCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 160
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 103/177 (58%), Gaps = 21/177 (11%)
Query: 198 KQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSML 257
KQF +K KK ++VI E L EE LKE F +D DK+G ++++EL+AGL +VG+ L
Sbjct: 1 KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANL 60
Query: 258 TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRA 317
E ++ L +AAD+D +G IDY EF AAT+ K+ER ++L AF YFDKD SGY
Sbjct: 61 KESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGY----- 115
Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV 374
+P ++ ++FG+ + + +++L D D +G ID+ EFV
Sbjct: 116 --ITPDELQQA-------CEEFGVEDVR-------IEELXRDVDQDNDGRIDYNEFV 156
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 356 LVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE 415
L D+D +G ID+ EF+ + K+E + L AF Y DK+ +IT +EL+ A +E
Sbjct: 68 LXQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEE 127
Query: 416 NNMGDDATIKEIISEVGRDH 435
+ +D I+E+ +V +D+
Sbjct: 128 FGV-EDVRIEELXRDVDQDN 146
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
F D D +G ++ DEL+ + G + + +++L D D +G IDY EF A
Sbjct: 105 FTYFDKDGSGYITPDELQQACEEFG--VEDVRIEELXRDVDQDNDGRIDYNEFVA 157
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 96/161 (59%), Gaps = 10/161 (6%)
Query: 18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP---KMKYAENDMMIR 74
K ED+ + F LG G F L E +T +A K + KK K EN++ +
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVL 74
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
R+I+ NIV L+ +E +++VM+L GG+LFDRI+ KG+Y+E+DA+ ++R
Sbjct: 75 RKIK-------HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR 127
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+++AV H MG++HRDLKPEN + S+D+ + + ++DFG
Sbjct: 128 QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFG 168
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 87/149 (58%), Gaps = 7/149 (4%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
+ LG G F + C +N +A K ++K+ + ++EI +L G PNIV
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEAN-------TQKEITALKLCEGHPNIV 69
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
+L D+ +VMEL GG+LF+RI K ++SE +A+ ++R +V+AV+ H +GV+H
Sbjct: 70 KLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALL 179
RDLKPEN F +DN +K+ DFG A L
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGFARL 158
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 93/163 (57%), Gaps = 21/163 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
E L EE LKE F +DTD +GT+++DEL+ GL +VGS L E ++K LM+AAD+D +
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 275 GAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTD 334
G IDY EF AAT+ KLER E L AF YFDKD SGY + ++
Sbjct: 61 GTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQA------------- 107
Query: 335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
K FGL + +M+K++ D D +G ID+ EF +M
Sbjct: 108 -CKDFGLDD---IHIDDMIKEI----DQDNDGQIDYGEFAAMM 142
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
+K L+ DID +G ID+ EF+ + KLE E L AF Y DK+ +IT++E++ A
Sbjct: 48 IKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQA 107
Query: 413 FKENNMGDDATIKEIISEVGRDH 435
K+ + DD I ++I E+ +D+
Sbjct: 108 CKDFGL-DDIHIDDMIKEIDQDN 129
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
E + L F D D +G ++ DE++ G L + + +++ D D +G IDY
Sbjct: 79 EREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYG 136
Query: 281 EFTAATIQRQ 290
EF A +R+
Sbjct: 137 EFAAMMRKRK 146
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 94/161 (58%), Gaps = 10/161 (6%)
Query: 18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP---KMKYAENDMMIR 74
K ED+ Y F +LG G F L + T A K +AKK K EN++ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
+I+ PNIV L +E ++++M+L GG+LFDRI+ KG+Y+ERDA+ ++
Sbjct: 71 HKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+++AV H +G++HRDLKPEN + S D+++ + ++DFG
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 144/286 (50%), Gaps = 32/286 (11%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ F +LG G F +L + T +A K + K P + D + EI + + + +
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR----DSSLENEIAVLKKIKHE 66
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
NIV L+ +E T ++VM+L GG+LFDRI+ +G Y+E+DA+ V++ +++AV H
Sbjct: 67 -NIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN 125
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG------GEASDDTSVILRMKQF 200
G++HRDLKPEN +++ ++N+ + +TDFG + + E+ G G +L K +
Sbjct: 126 GIVHRDLKPENLLYLTPEENSKIMITDFGLSKM-EQNGIMSTACGTPGYVAPEVLAQKPY 184
Query: 201 RRM---SKLKKLTVKVIVEYLP-GEETQA-----LKEKFIEMDTDKNGTLSYDELRAGLT 251
+ + +T ++ Y P EET++ +KE + E ++ +D++
Sbjct: 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESP-----FWDDISESAK 239
Query: 252 KVGSMLTE------FDVKQLMEAADMDGNGAIDYTEFTAATIQRQK 291
L E + ++ + +DGN A+ + + ++Q QK
Sbjct: 240 DFICHLLEKDPNERYTCEKALSHPWIDGNTALHRDIYPSVSLQIQK 285
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 10/161 (6%)
Query: 18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP---KMKYAENDMMIR 74
K ED+ Y F +LG G F L + T A K +AK+ K EN++ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
+I+ PNIV L +E ++++M+L GG+LFDRI+ KG+Y+ERDA+ ++
Sbjct: 71 HKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+++AV H +G++HRDLKPEN + S D+++ + ++DFG
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 10/161 (6%)
Query: 18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP---KMKYAENDMMIR 74
K ED+ Y F +LG G F L + T A K +AK+ K EN++ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
+I+ PNIV L +E ++++M+L GG+LFDRI+ KG+Y+ERDA+ ++
Sbjct: 71 HKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+++AV H +G++HRDLKPEN + S D+++ + ++DFG
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 10/161 (6%)
Query: 18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP---KMKYAENDMMIR 74
K ED+ Y F +LG G F L + T A K +AK+ K EN++ +
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
+I+ PNIV L +E ++++M+L GG+LFDRI+ KG+Y+ERDA+ ++
Sbjct: 71 HKIK-------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIF 123
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+++AV H +G++HRDLKPEN + S D+++ + ++DFG
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFG 164
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y LG+G F V C + T YA K + K K+ A + + RE +I RLL
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTK-KLS-ARDHQKLEREARICRLLK-H 62
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNIV L + +E ++V +L GG+LF+ I+A+ YYSE DA+ ++ I+ +VN CH
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
G++HRDLKPEN S+ A +K+ DFG A+
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 88/152 (57%), Gaps = 3/152 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y LG+G F V C + T YA K + K K+ A + + RE +I RLL
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTK-KLS-ARDHQKLEREARICRLLK-H 62
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNIV L + +E ++V +L GG+LF+ I+A+ YYSE DA+ ++ I+ +VN CH
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
G++HRDLKPEN S+ A +K+ DFG A+
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 3/157 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y LG+G F V C + YA K + K K+ A + + RE +I RLL
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTK-KLS-ARDHQKLEREARICRLLK-H 80
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNIV L + +E +++ +L GG+LF+ I+A+ YYSE DA+ ++ I+ AV CH M
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
GV+HRDLKPEN S+ A +K+ DFG A+ E E
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE 177
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 87/157 (55%), Gaps = 3/157 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y LG+G F V C + YA +M K A + + RE +I RLL
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYA--AMIINTKKLSARDHQKLEREARICRLLK-H 69
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNIV L + +E +++ +L GG+LF+ I+A+ YYSE DA+ ++ I+ AV CH M
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 129
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
GV+HR+LKPEN S+ A +K+ DFG A+ E E
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y R+LG+G FG LC + T A K ++K+ + + + ++R E+Q+ + L
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-EVQLLKQLD-H 108
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI++L ED+ ++V E+ GG+LFD II++ +SE DAA ++R +++ + H
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 168
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
++HRDLKPEN S+ +A +++ DFG + FE
Sbjct: 169 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 203
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 33/198 (16%)
Query: 192 SVILRMKQFRRMSKLKKLTVKVIVEYLPGE-ETQALKEKFIEMDTDKNGTLSYDELRAGL 250
+ IL ++QF+ KL + + + L + ET+ L F +MD + +G L EL G
Sbjct: 325 NAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGY 384
Query: 251 TKV-------GSML----TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS 299
++ SML E +V Q+++A D D NG I+Y+EF + R+ L E L
Sbjct: 385 KELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLE 444
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF+ FD DNSG +S T+ A FG+ + K ++ +
Sbjct: 445 RAFRMFDSDNSG---------------KISS--TELATIFGVSDVDS----ETWKSVLSE 483
Query: 360 GDIDGNGNIDFIEFVNLM 377
D + +G +DF EF ++
Sbjct: 484 VDKNNDGEVDFDEFQQML 501
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD 420
D D NG I++ EFV + D L + E LE+AF+ D ++ I+ EL T F +++ D
Sbjct: 415 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV-D 473
Query: 421 DATIKEIISEVGRDH 435
T K ++SEV +++
Sbjct: 474 SETWKSVLSEVDKNN 488
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y R+LG+G FG LC + T A K ++K+ ++K + + RE+Q+ + L
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR-QVKQKTDKESLLREVQLLKQLD-H 109
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI++L ED+ ++V E+ GG+LFD II++ +SE DAA ++R +++ + H
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 169
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
++HRDLKPEN S+ +A +++ DFG + FE
Sbjct: 170 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 204
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 33/198 (16%)
Query: 192 SVILRMKQFRRMSKLKKLTVKVIVEYLPGE-ETQALKEKFIEMDTDKNGTLSYDELRAGL 250
+ IL ++QF+ KL + + + L + ET+ L F +MD + +G L EL G
Sbjct: 326 NAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGY 385
Query: 251 TKV-------GSML----TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS 299
++ SML E +V Q+++A D D NG I+Y+EF + R+ L E L
Sbjct: 386 KELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLE 445
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF+ FD DNSG +S T+ A FG+ + K ++ +
Sbjct: 446 RAFRMFDSDNSG---------------KISS--TELATIFGVSDVDS----ETWKSVLSE 484
Query: 360 GDIDGNGNIDFIEFVNLM 377
D + +G +DF EF ++
Sbjct: 485 VDKNNDGEVDFDEFQQML 502
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD 420
D D NG I++ EFV + D L + E LE+AF+ D ++ I+ EL T F +++ D
Sbjct: 416 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV-D 474
Query: 421 DATIKEIISEVGRDH 435
T K ++SEV +++
Sbjct: 475 SETWKSVLSEVDKNN 489
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y R+LG+G FG LC + T A K ++K+ + + + ++R E+Q+ + L
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-EVQLLKQLD-H 85
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI++L ED+ ++V E+ GG+LFD II++ +SE DAA ++R +++ + H
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 145
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
++HRDLKPEN S+ +A +++ DFG + FE
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 93/198 (46%), Gaps = 33/198 (16%)
Query: 192 SVILRMKQFRRMSKLKKLTVKVIVEYLPGE-ETQALKEKFIEMDTDKNGTLSYDELRAGL 250
+ IL ++QF+ KL + + + L + ET+ L F +MD + +G L EL G
Sbjct: 302 NAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGY 361
Query: 251 TKV-------GSML----TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS 299
++ SML E +V Q+++A D D NG I+Y+EF + R+ L E L
Sbjct: 362 KELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLE 421
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF+ FD DNSG +S T+ A FG+ + K ++ +
Sbjct: 422 RAFRMFDSDNSG---------------KISS--TELATIFGVSDVDS----ETWKSVLSE 460
Query: 360 GDIDGNGNIDFIEFVNLM 377
D + +G +DF EF ++
Sbjct: 461 VDKNNDGEVDFDEFQQML 478
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD 420
D D NG I++ EFV + D L + E LE+AF+ D ++ I+ EL T F +++ D
Sbjct: 392 DFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATIFGVSDV-D 450
Query: 421 DATIKEIISEVGRDH 435
T K ++SEV +++
Sbjct: 451 SETWKSVLSEVDKNN 465
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 90/154 (58%), Gaps = 5/154 (3%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLS 84
+Y LG+G F V C +T + +A K + K K + D + RE +I R L
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQ 86
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
PNIV L + ++E+ ++V +L GG+LF+ I+A+ +YSE DA+ ++ I+ ++ CH
Sbjct: 87 -HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH 145
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
S G++HR+LKPEN S+ A +K+ DFG A+
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 91/155 (58%), Gaps = 2/155 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y R+LG+G FG LC + T A K ++K+ ++K + + RE+Q+ + L
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR-QVKQKTDKESLLREVQLLKQLD-H 85
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI +L ED+ ++V E+ GG+LFD II++ +SE DAA ++R +++ + H
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKN 145
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
++HRDLKPEN S+ +A +++ DFG + FE
Sbjct: 146 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 33/194 (17%)
Query: 192 SVILRMKQFRRMSKLKKLTVKVIVEYLPGE-ETQALKEKFIEMDTDKNGTLSYDELRAGL 250
+ IL ++QF+ KL + + L + ET+ L F + D + +G L EL G
Sbjct: 302 NAILNIRQFQGTQKLAQAALLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGY 361
Query: 251 -----------TKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLS 299
+ + + E +V Q+++A D D NG I+Y+EF R+ L E L
Sbjct: 362 KELXRXKGQDASXLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAXDRKTLLSRERLE 421
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF+ FD DNSG +S T+ A FG+ + K ++ +
Sbjct: 422 RAFRXFDSDNSG---------------KISS--TELATIFGVSDVDS----ETWKSVLSE 460
Query: 360 GDIDGNGNIDFIEF 373
D + +G +DF EF
Sbjct: 461 VDKNNDGEVDFDEF 474
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKENNMGD 420
D D NG I++ EFV + D L + E LE+AF+ D ++ I+ EL T F +++ D
Sbjct: 392 DFDKNGYIEYSEFVTVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATIFGVSDV-D 450
Query: 421 DATIKEIISEVGRDH 435
T K ++SEV +++
Sbjct: 451 SETWKSVLSEVDKNN 465
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSG 85
Y LG+G F V C +T + +A K + K K + D + RE +I R L
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQ- 63
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV L + ++E+ ++V +L GG+LF+ I+A+ +YSE DA+ ++ I+ ++ CHS
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
G++HR+LKPEN S+ A +K+ DFG A+
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G+G F V C + T YA K + K K+ A + + RE +I RLL NIV L
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTK-KLS-ARDHQKLEREARICRLLK-HSNIVRL 68
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
+ +E ++V +L GG+LF+ I+A+ YYSE DA+ ++ I+ AV CH MGV+HRD
Sbjct: 69 HDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRD 128
Query: 153 LKPENFCFISRDDNALLKVTDFGSAL 178
LKPEN S+ A +K+ DFG A+
Sbjct: 129 LKPENLLLASKCKGAAVKLADFGLAI 154
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 92/155 (59%), Gaps = 2/155 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y R+LG+G FG LC + T A K ++K+ ++K + + RE+Q+ + L
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKR-QVKQKTDKESLLREVQLLKQLD-H 91
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI++L ED+ ++V E+ GG+LFD II++ +SE DAA ++R +++ + H
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
++HRDLKPEN S+ +A +++ DFG + FE
Sbjct: 152 KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 186
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSG 85
Y LG+G F V C +T + +A K + K K + D + RE +I R L
Sbjct: 7 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQ- 62
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV L + ++E+ ++V +L GG+LF+ I+A+ +YSE DA+ ++ I+ ++ CHS
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
G++HR+LKPEN S+ A +K+ DFG A+
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 155
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 89/153 (58%), Gaps = 5/153 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSG 85
Y LG+G F V C +T + +A K + K K + D + RE +I R L
Sbjct: 8 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK---KLSARDFQKLEREARICRKLQ- 63
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV L + ++E+ ++V +L GG+LF+ I+A+ +YSE DA+ ++ I+ ++ CHS
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
G++HR+LKPEN S+ A +K+ DFG A+
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 194/466 (41%), Gaps = 84/466 (18%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y + LG G +G LC + T A K + KK + N + E+ + + L
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIK-IIKKSSVTTTSNSGALLDEVAVLKQLD-H 63
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI++L ED+ ++VME+ +GG+LFD II + +SE DAA +++ +++ H
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDF----------------GSALLFEEE------- 183
++HRDLKPEN S+ +AL+K+ DF G+A E
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYD 183
Query: 184 ----------------------GGEASDDTSVILRMKQ---------FRRMSKLKKLTVK 212
GG+ D ++ R+++ + ++S K VK
Sbjct: 184 EKCDVWSCGVILYILLCGYPPFGGQT--DQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 241
Query: 213 VIVEYLPGEET---QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAA 269
+++ Y P + +AL +I + T D + LT + +F Q + A
Sbjct: 242 LMLTYEPSKRISAEEALNHPWIVKFCSQKHT---DVGKHALTGALGNMKKFQSSQKLAQA 298
Query: 270 DMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVS 329
M G+ + LE ++ L++ F+ D + G + + ++E R +
Sbjct: 299 AMLFMGS-----------KLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG---YRKLM 344
Query: 330 HIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELL 389
D ++ Q A + ++ D D NG I++ EFV + D L + E L
Sbjct: 345 QWKGDTVSDL---DSSQIEAE--VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 399
Query: 390 EKAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEIISEVGRDH 435
AFQ D + IT EL F + DD T +++ E +++
Sbjct: 400 LAAFQQFDSDGSGKITNEELGRLFGVTEV-DDETWHQVLQECDKNN 444
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Query: 191 TSVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNGTLSYDELRAG 249
T + MK+F+ KL + + + L EET+ L + F ++D + +G L EL G
Sbjct: 280 TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 339
Query: 250 LTKV----GSMLTEFD-------VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYL 298
K+ G +++ D V ++++ D D NG I+Y+EF + +Q L E L
Sbjct: 340 YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 399
Query: 299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVL 358
AFQ FD D SG I N + + FG+ +L+
Sbjct: 400 LAAFQQFDSDGSG------------KITN-----EELGRLFGVTEVDDETWHQVLQ---- 438
Query: 359 QGDIDGNGNIDFIEFVNLMTDI 380
+ D + +G +DF EFV +M I
Sbjct: 439 ECDKNNDGEVDFEEFVEMMQKI 460
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y+ MLG+G FG C + T YA K + K ++ I RE+++ + L
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKLD-H 80
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI++L ED ++ ++V EL GG+LFD II + +SE DAA +++ + + + H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
++HRDLKPEN S++ + +K+ DFG + F++
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 44/213 (20%)
Query: 192 SVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNGTLSYDELRAG- 249
S + ++QF+ KL + + + L +ET+ L E F ++DT+ +G L DEL G
Sbjct: 298 SAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGMLDRDELVRGY 357
Query: 250 --------------LTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERS 295
+ GS + E + LM DMDG+G+I+Y+EF A+ I R L
Sbjct: 358 HEFMRLKGVDSNSLIQNEGSTI-EDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSR 416
Query: 296 EYLSKAFQYFDKDNSGY----DEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMN 351
E + +AF+ FDKD SG + F+ ++ +I+ M
Sbjct: 417 ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQ-----------------------ME 453
Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLE 384
L+ ++ Q D + +G +DF EFV ++ + + E
Sbjct: 454 ELESIIEQVDNNKDGEVDFNEFVEMLQNFVRNE 486
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 102/235 (43%), Gaps = 48/235 (20%)
Query: 197 MKQFRRMSKLKKLTVKVIVEYLPG---EETQALKEKFIEMDTDKNGTLS-YDELRAGLTK 252
+ Q+R +S K ++ ++ + P TQ L+ +I+ + + T+S L + +T
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTN 302
Query: 253 VGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG- 311
+ E K+L +AA + + A+ + L+ ++ L++ F+ D +N G
Sbjct: 303 IRQFQAE---KKLAQAALL----------YMASKLT--TLDETKQLTEIFRKLDTNNDGM 347
Query: 312 ---------YDEFRAM--VESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQG 360
Y EF + V+S I+N D+ M +L
Sbjct: 348 LDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSL----------MPLL------- 390
Query: 361 DIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE 415
D+DG+G+I++ EF+ D L + E +E+AF+ DK+ I+ EL F +
Sbjct: 391 DMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQ 445
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 85/152 (55%), Gaps = 3/152 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y LG+G F V C + + YA K + K K+ A + + RE +I RLL
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTK-KLS-ARDHQKLEREARICRLLK-H 89
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNIV L + +E ++V +L GG+LF+ I+A+ YYSE DA+ + I+ +VN H
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
++HRDLKPEN S+ A +K+ DFG A+
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y+ MLG+G FG C + T YA K + K ++ I RE+++ + L
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKLD-H 80
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI++L ED ++ ++V EL GG+LFD II + +SE DAA +++ + + + H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
++HRDLKPEN S++ + +K+ DFG + F++
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 3/156 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y+ MLG+G FG C + T YA K + K ++ I RE+++ + L
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTSTILREVELLKKLD-H 80
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI++L ED ++ ++V EL GG+LFD II + +SE DAA +++ + + + H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
++HRDLKPEN S++ + +K+ DFG + F++
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G + V C +TNM +A K + K + E ++++R PNI+ L
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLR--------YGQHPNIITL 81
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
K ++D V+VV EL +GG+L D+I+ + ++SER+A+ VL I V H+ GV+HRD
Sbjct: 82 KDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRD 141
Query: 153 LKPENFCFISRDDNA-LLKVTDFGSALLFEEEGG 185
LKP N ++ N +++ DFG A E G
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 11/161 (6%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y +G G + C +TNM YA K + K + E ++++R GQ
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRY---------GQ 79
Query: 87 -PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNI+ LK ++D V++V EL +GG+L D+I+ + ++SER+A+ VL I V HS
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 146 MGVMHRDLKPENFCFISRDDNA-LLKVTDFGSALLFEEEGG 185
GV+HRDLKP N ++ N L++ DFG A E G
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG 180
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 83/160 (51%), Gaps = 9/160 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y +G G + C +TNM YA K + K + E ++++R
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLR--------YGQH 80
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ LK ++D V++V EL +GG+L D+I+ + ++SER+A+ VL I V HS
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQ 140
Query: 147 GVMHRDLKPENFCFISRDDNA-LLKVTDFGSALLFEEEGG 185
GV+HRDLKP N ++ N L++ DFG A E G
Sbjct: 141 GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENG 180
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 2/158 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y + LG G +G LC + T A K + KK + N + E+ + + L
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIK-IIKKSSVTTTSNSGALLDEVAVLKQLD-H 80
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI++L ED+ ++VME+ +GG+LFD II + +SE DAA +++ +++ H
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 140
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
++HRDLKPEN S+ +AL+K+ DFG + FE G
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG 178
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 64
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 65 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 64
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 65 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 123
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 124 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K + KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFI-KKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 88/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V +++EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G + V C +TN +A K + K + E ++++R PNI+ L
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLR--------YGQHPNIITL 81
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
K ++D V+VV EL +GG+L D+I+ + ++SER+A+ VL I V H+ GV+HRD
Sbjct: 82 KDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRD 141
Query: 153 LKPENFCFISRDDNA-LLKVTDFGSALLFEEEGG 185
LKP N ++ N +++ DFG A E G
Sbjct: 142 LKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 87/161 (54%), Gaps = 6/161 (3%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREI 77
E+V +Y G LG G+F V C E ST + YA K KK + K + + I RE+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAK-FIKKRRTKSSRRGVSREDIEREV 65
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
I + + PN++ L +E++T V ++ EL GG+LFD + K +E +A L+ I+
Sbjct: 66 SILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQIL 124
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
N V HS+ + H DLKPEN + R+ +K+ DFG A
Sbjct: 125 NGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQ 78
EDV HY G LG G+F + C + T YA K + K+ + + I RE+
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 79 IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
I R + PNI+ L E++T V +++EL GG+LFD + K +E +A L+ I++
Sbjct: 68 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 126
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
V+ HS + H DLKPEN + ++ N +K+ DFG A
Sbjct: 127 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 9/181 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ F R LG G FG +L E S+ + K++ K E I EI++ + L
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQ---IEAEIEVLKSLD-H 79
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRII---AKG-YYSERDAAPVLRAIVNAVNV 142
PNI+++ ED +++VME C+GG+L +RI+ A+G SE A +++ ++NA+
Sbjct: 80 PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE-EEGGEASDDTSVILRMKQFR 201
HS V+H+DLKPEN F ++ +K+ DFG A LF+ +E + T++ + + F+
Sbjct: 140 FHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK 199
Query: 202 R 202
R
Sbjct: 200 R 200
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 4/155 (2%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLL 83
HY G LG G+F + C + T YA K + K+ + + I RE+ I R +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
PNI+ L E++T V +++EL GG+LFD + K +E +A L+ I++ V+
Sbjct: 66 R-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124
Query: 144 HSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
HS + H DLKPEN + ++ N +K+ DFG A
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 83/156 (53%), Gaps = 6/156 (3%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM---IRREIQIRRL 82
HY G LG G+F + C + T YA K KK ++ + + I RE+ I R
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAK-FIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
+ PNI+ L E++T V +++EL GG+LFD + K +E +A L+ I++ V+
Sbjct: 86 IR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 144
Query: 143 CHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
HS + H DLKPEN + ++ N +K+ DFG A
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ-----IRR 81
Y G LG G+F + C E ST + YA K + K+ A + R EI+ +R+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKR--QSRASRRGVCREEIEREVSILRQ 71
Query: 82 LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
+L PNI+ L +E+ T V +++EL GG+LFD + K SE +A ++ I++ VN
Sbjct: 72 VL--HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVN 129
Query: 142 VCHSMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
H+ + H DLKPEN + ++ +K+ DFG A
Sbjct: 130 YLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 102/189 (53%), Gaps = 18/189 (9%)
Query: 190 DTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAG 249
D V+ K + M + +KL + +I + + Q LK F+ +D + G ++ +LR G
Sbjct: 21 DIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLRKG 80
Query: 250 LTKVGSMLT-EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKD 308
L + G ML FD+ L++ D DG+G IDYTEF AA I R++L + + + AF+ FD D
Sbjct: 81 LERSGLMLPPNFDL--LLDQIDSDGSGNIDYTEFLAAAIDRRQLSK-KLIYCAFRVFDVD 137
Query: 309 NSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNI 368
N G T ++H+ + K+ GN + R +N +KK++ + D +G+G I
Sbjct: 138 NDG----------EITTAELAHVLFNGNKR---GNITE-RDVNQVKKMIREVDKNGDGKI 183
Query: 369 DFIEFVNLM 377
DF EF +M
Sbjct: 184 DFYEFSEMM 192
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 356 LVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNEL-ETAFK 414
L+ Q D DG+GNID+ EF+ D +L + +L+ AF+ D ++D IT EL F
Sbjct: 95 LLDQIDSDGSGNIDYTEFLAAAIDRRQL-SKKLIYCAFRVFDVDNDGEITTAELAHVLFN 153
Query: 415 ENNMG-----DDATIKEIISEVGRD 434
N G D +K++I EV ++
Sbjct: 154 GNKRGNITERDVNQVKKMIREVDKN 178
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 185 GEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYD 244
G ++++ +K F++ ++LKK+ + +I ++L E L+ FI +D D +GTLS
Sbjct: 18 GHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQ 77
Query: 245 ELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQY 304
E+ GL K+G D+ Q++ D + +G I YT+F AATI +Q + E F++
Sbjct: 78 EILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKF 137
Query: 305 FDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDG 364
FD D +G + VE + I FG + + + L+ + D++G
Sbjct: 138 FDIDGNG----KISVEELKRI-------------FGRDDIENPLIDKAIDSLLQEVDLNG 180
Query: 365 NGNIDFIEFVNLMT 378
+G IDF EF+ +M+
Sbjct: 181 DGEIDFHEFMLMMS 194
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 82/155 (52%), Gaps = 8/155 (5%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE-----IQIR 80
+Y +LGRG V C T YA K + ++ ++ RE + I
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 81 RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
R +SG PNI++LK +E T +V +L + G+LFD + K SE++ ++RA++ +
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVI 124
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
H + ++HRDLKPEN I DD+ +K+TDFG
Sbjct: 125 CALHKLNIVHRDLKPEN---ILLDDDMNIKLTDFG 156
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPK--MKYAENDMMIRREIQIRRLLS 84
Y G LG G+F + C E ST + YA K + K+ + + I RE+ I R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
N++ L +E+ T V +++EL GG+LFD + K SE +A ++ I++ VN H
Sbjct: 74 HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 145 SMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
+ + H DLKPEN + ++ +K+ DFG A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 72
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G+++ + + E+ A + + NA++ CHS
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 161
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE-----IQIRR 81
Y +LGRG V C T YA K + ++ ++ RE + I R
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 82 LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
+SG PNI++LK +E T +V +L + G+LFD + K SE++ ++RA++ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
H + ++HRDLKPEN I DD+ +K+TDFG
Sbjct: 139 ALHKLNIVHRDLKPEN---ILLDDDMNIKLTDFG 169
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE-----IQIRR 81
Y +LGRG V C T YA K + ++ ++ RE + I R
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 82 LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
+SG PNI++LK +E T +V +L + G+LFD + K SE++ ++RA++ +
Sbjct: 79 KVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVIC 138
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
H + ++HRDLKPEN I DD+ +K+TDFG
Sbjct: 139 ALHKLNIVHRDLKPEN---ILLDDDMNIKLTDFG 169
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 16 LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
LG + + + GR LG+G+FG YL E + A K + K +++ A + +RR
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKT-QLEKAGVEHQLRR 61
Query: 76 EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
E++I+ L PNI+ L D T V++++E G ++ + + E+ A +
Sbjct: 62 EVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
+ NA++ CHS V+HRD+KPEN S N LK+ DFG ++
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGS---NGELKIADFGWSV 160
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--KYAENDMMIRREIQIRRLLS 84
Y G LG G+F + C E ST + YA K + K+ + + I RE+ I R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
N++ L +E+ T V +++EL GG+LFD + K SE +A ++ I++ VN H
Sbjct: 74 HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 145 SMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
+ + H DLKPEN + ++ +K+ DFG A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 16 LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
LG + + + GR LG+G+FG YL E + A K + K +++ A + +RR
Sbjct: 3 LGSKRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKT-QLEKAGVEHQLRR 61
Query: 76 EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
E++I+ L PNI+ L D T V++++E G ++ + + E+ A +
Sbjct: 62 EVEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
+ NA++ CHS V+HRD+KPEN S N LK+ DFG ++
Sbjct: 121 LANALSYCHSKRVIHRDIKPENLLLGS---NGELKIADFGWSV 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 72
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G+++ + + E+ A + + NA++ CHS
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 161
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--KYAENDMMIRREIQIRRLLS 84
Y G LG G+F + C E ST + YA K + K+ + + I RE+ I R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
N++ L +E+ T V +++EL GG+LFD + K SE +A ++ I++ VN H
Sbjct: 74 HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 145 SMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
+ + H DLKPEN + ++ +K+ DFG A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--KYAENDMMIRREIQIRRLLS 84
Y G LG G+F + C E ST + YA K + K+ + + I RE+ I R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
N++ L +E+ T V +++EL GG+LFD + K SE +A ++ I++ VN H
Sbjct: 74 HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 145 SMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
+ + H DLKPEN + ++ +K+ DFG A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 4/154 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM--KYAENDMMIRREIQIRRLLS 84
Y G LG G+F + C E ST + YA K + K+ + + I RE+ I R +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
N++ L +E+ T V +++EL GG+LFD + K SE +A ++ I++ VN H
Sbjct: 74 HH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH 132
Query: 145 SMGVMHRDLKPENFCFISRD-DNALLKVTDFGSA 177
+ + H DLKPEN + ++ +K+ DFG A
Sbjct: 133 TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 89/162 (54%), Gaps = 10/162 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRR-------EIQIRR 81
R LG G +G LC E + + A K + K K +Y++++ I + EI + +
Sbjct: 42 RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLK 101
Query: 82 LLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
L PNI++L ED+ ++V E +GG+LF++II + + E DAA +++ I++ +
Sbjct: 102 SLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGIC 160
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
H ++HRD+KPEN +++ +K+ DFG + F ++
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD 202
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 34/195 (17%)
Query: 197 MKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS 255
M++F KL + + I L EE + L + F ++D + +G L EL G + +
Sbjct: 327 MRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRN 386
Query: 256 MLTEF--------DVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDK 307
E +V +++ D D NG I+Y+EF + + +Q L E L +AF FD
Sbjct: 387 FKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDT 446
Query: 308 DNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGN 367
D SG + + + N+ FGL + + ++L G+ D N +
Sbjct: 447 DKSG-------KITKEELANL----------FGLTSISEKTWNDVL------GEADQNKD 483
Query: 368 --IDFIEFVNLMTDI 380
IDF EFV++M I
Sbjct: 484 NMIDFDEFVSMMHKI 498
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFR--A 349
LE + L+ F+ DK+ G + + ++E +RN K LG K
Sbjct: 351 LEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNF---------KNELGELKNVEEEV 401
Query: 350 MNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNEL 409
N+LK++ D D NG I++ EF+++ D L + E L +AF D + IT EL
Sbjct: 402 DNILKEV----DFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEEL 457
Query: 410 ETAF 413
F
Sbjct: 458 ANLF 461
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 85/161 (52%), Gaps = 5/161 (3%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
GK + + + GR LG+G+FG YL E + A K + K +++ A + +RRE
Sbjct: 1 GKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRRE 59
Query: 77 IQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
++I+ L PNI+ L D T V++++E G ++ + + E+ A + +
Sbjct: 60 VEIQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
NA++ CHS V+HRD+KPEN S + LK+ DFG +
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS 156
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 89/168 (52%), Gaps = 18/168 (10%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 73
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
HS+ + HRD+KPEN + S+ NA+LK+TDFG A +E GE D +
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA---KETTGEKYDKS 178
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
++LG G G C T A K + PK R+E+ SG P+IV
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA---------RQEVDHHWQASGGPHIV 66
Query: 91 EL----KSAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCH 144
+ ++ H + + ++ME +GG+LF RI +G ++ER+AA ++R I A+ H
Sbjct: 67 CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 126
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S + HRD+KPEN + S++ +A+LK+TDFG A
Sbjct: 127 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 159
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 82/153 (53%), Gaps = 15/153 (9%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
++LG G G C T A K + PK R+E+ SG P+IV
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA---------RQEVDHHWQASGGPHIV 85
Query: 91 EL----KSAHEDETAVHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCH 144
+ ++ H + + ++ME +GG+LF RI +G ++ER+AA ++R I A+ H
Sbjct: 86 CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH 145
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S + HRD+KPEN + S++ +A+LK+TDFG A
Sbjct: 146 SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E ++ A K + K +++ A + +RRE++I+ L
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 68 PNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 128 KVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 84
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 85 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 144
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 145 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 173
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 5/160 (3%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
P + + + GR LG+G+FG YL E + A K + K +++ A + +RRE++
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVE 60
Query: 79 IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
I+ L PNI+ L D T V++++E G ++ + + E+ A + + N
Sbjct: 61 IQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
A++ CHS V+HRD+KPEN S + LK+ DFG ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 5/160 (3%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
P + + + GR LG+G+FG YL E + A K + K +++ A + +RRE++
Sbjct: 2 PRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVE 60
Query: 79 IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
I+ L PNI+ L D T V++++E G ++ + + E+ A + + N
Sbjct: 61 IQSHLR-HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 119
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
A++ CHS V+HRD+KPEN S + LK+ DFG ++
Sbjct: 120 ALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 159
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 159
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 71
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 131
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 132 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 160
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 72
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 161
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 93
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 154 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 182
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 159
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 159
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 66
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 67 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 126
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 127 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 155
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 72
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 161
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 81/148 (54%), Gaps = 7/148 (4%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMA----KKPKMKYAENDMMIRREIQIRRLLSGQP 87
++GRG V C +T +A K M + + E RRE I R ++G P
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
+I+ L ++E + + +V +L + G+LFD + K SE++ ++R+++ AV+ H+
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLKPEN DDN ++++DFG
Sbjct: 221 IVHRDLKPENILL---DDNMQIRLSDFG 245
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 69
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 130 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 158
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 68
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 129 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 157
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 68
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 69 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 128
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 129 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 157
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 93
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 94 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 153
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 154 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 182
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 72
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 73 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 132
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 133 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 161
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 159
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 67
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 68 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 128 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 156
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 73 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 123
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 124 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 183
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 184 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 217
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 117
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 118 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 177
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 73
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 28 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 78
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 79 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 138
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 139 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 172
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 73
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 74 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 133
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 29 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 79
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 80 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 139
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 140 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 173
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 27 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 77
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 78 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 137
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 138 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 171
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 22 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 72
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 73 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 132
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 133 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 166
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 71
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 72 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 83/154 (53%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHI 71
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+
Sbjct: 72 VRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYL 131
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 132 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 165
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 81/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E A K + K +++ A + +RRE++I+ L
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 65 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ DFG ++
Sbjct: 125 RVIHRDIKPENLLLGSAGE---LKIADFGWSV 153
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 15/153 (9%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
++LG G G T +A K + PK RRE+++ S P+IV
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKA---------RREVELHWRASQCPHIV 88
Query: 91 ELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVCH 144
+ +E+ A + +VME GG+LF RI +G ++ER+A+ ++++I A+ H
Sbjct: 89 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 148
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 149 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 181
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 70
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 71 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ +FG ++
Sbjct: 131 RVIHRDIKPENLLLGSAGE---LKIANFGWSV 159
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
+LG GRFG + C E +T + A K + K MK E ++ EI + L N+++
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAK-IIKTRGMKDKEE---VKNEISVMNQLD-HANLIQ 150
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHSMGVMH 150
L A E + + +VME GG+LFDRII + Y +E D ++ I + H M ++H
Sbjct: 151 LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILH 210
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSA 177
DLKPEN ++RD +K+ DFG A
Sbjct: 211 LDLKPENILCVNRDAKQ-IKIIDFGLA 236
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E + A K + K +++ A + +RRE++I+ L
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-QLEKAGVEHQLRREVEIQSHLR-H 69
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L D T V++++E G ++ + + E+ A + + NA++ CHS
Sbjct: 70 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK 129
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN S + LK+ +FG ++
Sbjct: 130 RVIHRDIKPENLLLGSAGE---LKIANFGWSV 158
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 6/150 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y + +G+G F L T A K + K + + RE++I ++L+
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLN- 64
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV+L E E +++VME GG++FD ++A G+ E++A R IV+AV CH
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK EN D + +K+ DFG
Sbjct: 125 KFIVHRDLKAENLLL---DADMNIKIADFG 151
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y + +G+G F L T A K + K + + RE++I ++L+
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLF--REVRIMKILN- 72
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV+L E E +++VME GG++FD ++A G E++A R IV+AV CH
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK EN D + +K+ DFG
Sbjct: 133 KYIVHRDLKAENLLL---DGDMNIKIADFG 159
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 17/174 (9%)
Query: 20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACK-----SMAKKPKMKYAENDMMIR 74
+EDV Y ++G+G F V C T +A K P + + ++
Sbjct: 22 FEDV---YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED----LK 74
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG----YYSERDAA 130
RE I +L P+IVEL + + +++V E G DL I+ + YSE A+
Sbjct: 75 REASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133
Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
+R I+ A+ CH ++HRD+KPEN S++++A +K+ DFG A+ E G
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E A K + K +++ + +RREI+I+ L
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKS-QLEKEGVEHQLRREIEIQSHLR-H 74
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ + + D +++++E G+L+ + G + E+ +A + + +A++ CH
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 134
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN + + LK+ DFG ++
Sbjct: 135 KVIHRDIKPENLLMGYKGE---LKIADFGWSV 163
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
++LG G G T +A K + PK RRE+++ S P+I
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKA---------RREVELHWRASQCPHI 117
Query: 90 VELKSAHEDETA----VHVVMELCQGGDLFDRIIAKG--YYSERDAAPVLRAIVNAVNVC 143
V + +E+ A + +V E GG+LF RI +G ++ER+A+ + ++I A+
Sbjct: 118 VRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYL 177
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS+ + HRD+KPEN + S+ NA+LK+TDFG A
Sbjct: 178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 5/152 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E A K + K +++ + +RREI+I+ L
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKS-QLEKEGVEHQLRREIEIQSHLR-H 73
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ + + D +++++E G+L+ + G + E+ +A + + +A++ CH
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER 133
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
V+HRD+KPEN + + LK+ DFG ++
Sbjct: 134 KVIHRDIKPENLLMGYKGE---LKIADFGWSV 162
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y + +G+G F L T A K + K + + RE++I ++L+
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF--REVRIMKILN- 69
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV+L E E ++++ME GG++FD ++A G E++A R IV+AV CH
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK EN D + +K+ DFG
Sbjct: 130 KRIVHRDLKAENLLL---DADMNIKIADFG 156
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 99/186 (53%), Gaps = 18/186 (9%)
Query: 193 VILRMKQFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTK 252
V+ K + + K +KL + +I + + + LK F+ +D D G ++ ++L+ GL K
Sbjct: 21 VLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK 80
Query: 253 VGSMLT-EFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
G L FD+ L++ D DG+G IDYTEF AA + R++L + + + AF+ FD DN G
Sbjct: 81 DGLKLPYNFDL--LLDQIDSDGSGKIDYTEFIAAALDRKQLSK-KLIYCAFRVFDVDNDG 137
Query: 312 YDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFI 371
T ++HI + KK GN Q R +N +K+++ D + +G IDF
Sbjct: 138 ----------EITTAELAHILYNGNKK---GNITQ-RDVNRVKRMIRDVDKNNDGKIDFH 183
Query: 372 EFVNLM 377
EF +M
Sbjct: 184 EFSEMM 189
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 356 LVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETAFKE 415
L+ Q D DG+G ID+ EF+ D +L + +L+ AF+ D ++D IT EL
Sbjct: 92 LLDQIDSDGSGKIDYTEFIAAALDRKQL-SKKLIYCAFRVFDVDNDGEITTAELAHILYN 150
Query: 416 NNMGDDATIKEI 427
N + T +++
Sbjct: 151 GNKKGNITQRDV 162
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y + +G+G F L T A K + K + + RE++I ++L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLN- 71
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV+L E E +++VME GG++FD ++A G E++A R IV+AV CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK EN D + +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFG 158
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y + +G+G F L T A K + K + + RE++I ++L+
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLF--REVRIMKILN- 72
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV+L E E ++++ME GG++FD ++A G E++A R IV+AV CH
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK EN D + +K+ DFG
Sbjct: 133 KRIVHRDLKAENLLL---DADMNIKIADFG 159
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y + +G+G F L T A K + K + + RE++I ++L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLN- 71
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV+L E E +++VME GG++FD ++A G E++A R IV+AV CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK EN D + +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFG 158
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y + +G+G F L T A K + K + + RE++I ++L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF--REVRIMKVLN- 71
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV+L E E +++VME GG++FD ++A G E++A R IV+AV CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK EN D + +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFG 158
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 14 PILGKPYEDVMLH----YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
P + P + ++H Y + +G G FGV L + +N A K + + K+ A N
Sbjct: 4 PAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI--AAN 61
Query: 70 DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
++REI R L PNIV K T + +VME GG+LF+RI G +SE +A
Sbjct: 62 ---VKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ +++ V+ CH+M V HRDLK EN + LK+ DFG
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLEN-TLLDGSPAPRLKICDFG 162
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 12 RYPILGKPYEDVMLH----YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA 67
R P+ P + ++H Y F + +G G FGV L + T A K + + A
Sbjct: 3 RAPVTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG-----A 57
Query: 68 ENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSER 127
D ++REI R L PNIV K T + ++ME GG+L++RI G +SE
Sbjct: 58 AIDENVQREIINHRSLR-HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSED 116
Query: 128 DAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+A + +++ V+ CHSM + HRDLK EN + LK+ DFG
Sbjct: 117 EARFFFQQLLSGVSYCHSMQICHRDLKLEN-TLLDGSPAPRLKICDFG 163
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 7/149 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y + +G G FGV L + +N A K + + K+ D ++REI R L
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI-----DENVKREIINHRSLR-H 73
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNIV K T + +VME GG+LF+RI G +SE +A + +++ V+ CH+M
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
V HRDLK EN + LK+ DFG
Sbjct: 134 QVCHRDLKLEN-TLLDGSPAPRLKICDFG 161
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y + +G+G F L T A + + K + + RE++I ++L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF--REVRIMKVLN- 71
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV+L E E +++VME GG++FD ++A G E++A R IV+AV CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK EN D + +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFG 158
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 6/150 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y + +G+G F L T A + + K + + RE++I ++L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLF--REVRIMKVLN- 71
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV+L E E +++VME GG++FD ++A G E++A R IV+AV CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK EN D + +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADMNIKIADFG 158
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y + +G+G F L T A K + K + + RE++I ++L+
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLF--REVRIXKVLN- 71
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
PNIV+L E E +++V E GG++FD ++A G E++A R IV+AV CH
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK EN D + +K+ DFG
Sbjct: 132 KFIVHRDLKAENLLL---DADXNIKIADFG 158
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
HY G LG G FG + T A K + ++ K++ + I+REIQ +L
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ-KIRSLDVVGKIKREIQNLKLFR- 69
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
P+I++L T +VME GG+LFD I G E +A + + I++AV+ CH
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
V+HRDLKPEN D + K+ DFG
Sbjct: 130 HMVVHRDLKPENVLL---DAHMNAKIADFG 156
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 18 KPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREI 77
K Y++++ +Y +G G F L T A K M K + I+ EI
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKN---TLGSDLPRIKTEI 59
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
+ + L Q +I +L E + +V+E C GG+LFD II++ SE + V R IV
Sbjct: 60 EALKNLRHQ-HICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIV 118
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+AV HS G HRDLKPEN F D+ LK+ DFG
Sbjct: 119 SAVAYVHSQGYAHRDLKPENLLF---DEYHKLKLIDFG 153
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y LG G FG L T T A K ++++ +K ++ M + REI +LL
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQ-LLKKSDMHMRVEREISYLKLLR-H 68
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P+I++L T + +V+E GG+LFD I+ K +E + + I+ A+ CH
Sbjct: 69 PHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLKPEN DDN +K+ DFG
Sbjct: 128 KIVHRDLKPENLLL---DDNLNVKIADFG 153
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 5/150 (3%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
HY G LG G FG + T A K + ++ K++ + I+REIQ +L
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ-KIRSLDVVGKIKREIQNLKLFR- 69
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
P+I++L T +VME GG+LFD I G E +A + + I++AV+ CH
Sbjct: 70 HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
V+HRDLKPEN D + K+ DFG
Sbjct: 130 HMVVHRDLKPENVLL---DAHMNAKIADFG 156
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 14 PILGKPYEDVMLH----YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
P + P + ++H Y + +G G FGV L + +N A K + + K+
Sbjct: 4 PAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----- 58
Query: 70 DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
D ++REI R L PNIV K T + +VME GG+LF+RI G +SE +A
Sbjct: 59 DENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ +++ V+ CH+M V HRDLK EN + LK+ FG
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLEN-TLLDGSPAPRLKICAFG 162
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 11/166 (6%)
Query: 14 PILGKPYEDVMLH----YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
P + P + ++H Y + +G G FGV L + +N A K + + K+
Sbjct: 4 PAVSGPMDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----- 58
Query: 70 DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
D ++REI R L PNIV K T + +VME GG+LF+RI G +SE +A
Sbjct: 59 DENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ +++ V+ CH+M V HRDLK EN + LK+ FG
Sbjct: 118 RFFFQQLISGVSYCHAMQVCHRDLKLEN-TLLDGSPAPRLKICAFG 162
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
HY G LG G FG + T A K + ++ K++ + IRREIQ +L
Sbjct: 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQ-KIRSLDVVGKIRREIQNLKLFR- 74
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
P+I++L + + +VME GG+LFD I G E+++ + + I++ V+ CH
Sbjct: 75 HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
V+HRDLKPEN D + K+ DFG
Sbjct: 135 HMVVHRDLKPENVLL---DAHMNAKIADFG 161
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 14 PILGKPYEDVMLH----YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEN 69
P + P + ++H Y + +G G FGV L + N A K + + K+
Sbjct: 4 PAVAGPMDLPIMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKI----- 58
Query: 70 DMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
D ++REI R L PNIV K T + +VME GG+LF+RI G +SE +A
Sbjct: 59 DENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA 117
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ +++ V+ H+M V HRDLK EN + LK+ DFG
Sbjct: 118 RFFFQQLISGVSYAHAMQVAHRDLKLEN-TLLDGSPAPRLKIADFG 162
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
Y + LG G G L E T A K ++K+ + A+ + + EI+I +
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
L+ P I+++K+ + E ++V+EL +GG+LFD+++ E ++ AV
Sbjct: 71 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 128
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
H G++HRDLKPEN S++++ L+K+TDFG + + E
Sbjct: 129 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 168
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
Y + LG G G L E T A K ++K+ + A+ + + EI+I +
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
L+ P I+++K+ + E ++V+EL +GG+LFD+++ E ++ AV
Sbjct: 72 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
H G++HRDLKPEN S++++ L+K+TDFG + + E
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
Y + LG G G L E T A K ++K+ + A+ + + EI+I +
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
L+ P I+++K+ + E ++V+EL +GG+LFD+++ E ++ AV
Sbjct: 72 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
H G++HRDLKPEN S++++ L+K+TDFG + + E
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
Y + LG G G L E T A K ++K+ + A+ + + EI+I +
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
L+ P I+++K+ + E ++V+EL +GG+LFD+++ E ++ AV
Sbjct: 78 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 135
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
H G++HRDLKPEN S++++ L+K+TDFG + + E
Sbjct: 136 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 175
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
Y + LG G G L E T A K ++K+ + A+ + + EI+I +
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
L+ P I+++K+ + E ++V+EL +GG+LFD+++ E ++ AV
Sbjct: 72 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 129
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
H G++HRDLKPEN S++++ L+K+TDFG + + E
Sbjct: 130 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 169
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
R LG+G+FG YL E A K + K +++ + +RREI+I+ L PNI+
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKS-QLEKEGVEHQLRREIEIQSHLR-HPNIL 77
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
+ + D +++++E G+L+ + G + E+ +A + + +A++ CH V+H
Sbjct: 78 RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSAL 178
RD+KPEN + + LK+ DFG ++
Sbjct: 138 RDIKPENLLMGYKGE---LKIADFGWSV 162
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEIXINKMLNHE 65
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 66 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEIXINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%)
Query: 212 KVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADM 271
K + E L EE LKE F +DTD +GT+++DEL+ GL +VGS L E ++K LM+AAD+
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 272 DGNGAIDYTEFTAATIQ 288
D +G IDY EF AAT+
Sbjct: 71 DKSGTIDYGEFIAATVH 87
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLS 84
Y + LG G FG L +T A K + KK A++DM I REI RLL
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREISYLRLLR 72
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P+I++L + + + +V+E G +LFD I+ + SE++A + I++AV CH
Sbjct: 73 -HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLKPEN D++ +K+ DFG
Sbjct: 131 RHKIVHRDLKPENLLL---DEHLNVKIADFG 158
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLS 84
Y + LG G FG L +T A K + KK A++DM I REI RLL
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREISYLRLLR 62
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P+I++L + + + +V+E G +LFD I+ + SE++A + I++AV CH
Sbjct: 63 -HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLKPEN D++ +K+ DFG
Sbjct: 121 RHKIVHRDLKPENLLL---DEHLNVKIADFG 148
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLS 84
Y + LG G FG L +T A K + KK A++DM I REI RLL
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREISYLRLLR 71
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P+I++L + + + +V+E G +LFD I+ + SE++A + I++AV CH
Sbjct: 72 -HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLKPEN D++ +K+ DFG
Sbjct: 130 RHKIVHRDLKPENLLL---DEHLNVKIADFG 157
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEIXINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 10/151 (6%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREIQIRRLLS 84
Y + LG G FG L +T A K + KK A++DM I REI RLL
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKK---VLAKSDMQGRIEREISYLRLLR 66
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P+I++L + + + +V+E G +LFD I+ + SE++A + I++AV CH
Sbjct: 67 -HPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLKPEN D++ +K+ DFG
Sbjct: 125 RHKIVHRDLKPENLLL---DEHLNVKIADFG 152
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
Y + LG G G L E T A + ++K+ + A+ + + EI+I +
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
L+ P I+++K+ + E ++V+EL +GG+LFD+++ E ++ AV
Sbjct: 211 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 268
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
H G++HRDLKPEN S++++ L+K+TDFG + + E
Sbjct: 269 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 308
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP----KMKYAENDMMIRREIQIRRL 82
Y + LG G G L E T A + ++K+ + A+ + + EI+I +
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
L+ P I+++K+ + E ++V+EL +GG+LFD+++ E ++ AV
Sbjct: 197 LN-HPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQY 254
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
H G++HRDLKPEN S++++ L+K+TDFG + + E
Sbjct: 255 LHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 294
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQ 78
++ V+ HY LG G FGV + TE +T +A K + M E+D +R+EIQ
Sbjct: 46 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-----MTPHESDKETVRKEIQ 100
Query: 79 IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-AKGYYSERDAAPVLRAIV 137
+L P +V L A ED+ + ++ E GG+LF+++ SE +A +R +
Sbjct: 101 TMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 159
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ H +H DLKPEN F ++ N LK+ DFG
Sbjct: 160 KGLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFG 196
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 66 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 66 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 63
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 64 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 122
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 123 GITHRDIKPENLLLDERDN---LKISDFGLATVF 153
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQ 78
++ V+ HY LG G FGV + TE +T +A K + M E+D +R+EIQ
Sbjct: 152 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV-----MTPHESDKETVRKEIQ 206
Query: 79 IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-AKGYYSERDAAPVLRAIV 137
+L P +V L A ED+ + ++ E GG+LF+++ SE +A +R +
Sbjct: 207 TMSVLR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVC 265
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ H +H DLKPEN F ++ N LK+ DFG
Sbjct: 266 KGLCHMHENNYVHLDLKPENIMFTTKRSNE-LKLIDFG 302
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 66 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 66 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 66 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I ++L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 65
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 66 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSG 85
Y +++GRG FG L ST YA K ++K +K +++ R+I +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA---FAN 132
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
P +V+L A +D+ +++VME GGDL + +++ E+ A +V A++ HS
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
MG +HRD+KP+N D + LK+ DFG+ + +EG
Sbjct: 192 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEG 227
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSG 85
Y +++GRG FG L ST YA K ++K +K +++ R+I +
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA---FAN 127
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
P +V+L A +D+ +++VME GGDL + +++ E+ A +V A++ HS
Sbjct: 128 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 186
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
MG +HRD+KP+N D + LK+ DFG+ + +EG
Sbjct: 187 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEG 222
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G +G L T A K + K + EN I++EI I +L+ +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINAMLNHE 65
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 66 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 125 GITHRDIKPENLLLDERDN---LKISDFGLATVF 155
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSG 85
Y +++GRG FG L ST YA K ++K +K +++ R+I +
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA---FAN 132
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
P +V+L A +D+ +++VME GGDL + +++ E+ A +V A++ HS
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
MG +HRD+KP+N D + LK+ DFG+ + +EG
Sbjct: 192 MGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEG 227
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 86/155 (55%), Gaps = 13/155 (8%)
Query: 26 HYSFGRMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
H+ ++LG+G FG +L T + YA K + KK +K + +R +++ R +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL-KKATLKVRDR---VRTKME-RDI 83
Query: 83 LS--GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L+ P +V+L A + E ++++++ +GGDLF R+ + ++E D L + +
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ HS+G+++RDLKPEN D+ +K+TDFG
Sbjct: 144 DHLHSLGIIYRDLKPENILL---DEEGHIKLTDFG 175
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ + LG G G L T A K + K + EN I++EI I ++L+ +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPEN---IKKEICINKMLNHE 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
N+V+ + ++ +E C GG+LFDRI E DA ++ V H +
Sbjct: 65 -NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI 123
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
G+ HRD+KPEN RD+ LK++DFG A +F
Sbjct: 124 GITHRDIKPENLLLDERDN---LKISDFGLATVF 154
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F T L E +T+ YA K + K+ +K + + R + RL
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 89
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 150 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACK-----SMAKKPKMKYAENDMMIR 74
+EDV Y ++G+G F V C T +A K P + + ++
Sbjct: 22 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED----LK 74
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG----YYSERDAA 130
RE I +L P+IVEL + + +++V E G DL I+ + YSE A+
Sbjct: 75 REASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 133
Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
+R I+ A+ CH ++HRD+KP S++++A +K+ FG A+ E G
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR-REIQIRRLLSG 85
Y +++GRG FG L ++ YA K ++K +K +++ R+I +
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA---FAN 133
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
P +V+L A +D+ +++VME GGDL + +++ E+ A +V A++ HS
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHS 192
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
MG++HRD+KP+N D + LK+ DFG+ + +E G
Sbjct: 193 MGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETG 228
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACK-----SMAKKPKMKYAENDMMIR 74
+EDV Y ++G+G F V C T +A K P + + ++
Sbjct: 24 FEDV---YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED----LK 76
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKG----YYSERDAA 130
RE I +L P+IVEL + + +++V E G DL I+ + YSE A+
Sbjct: 77 REASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVAS 135
Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
+R I+ A+ CH ++HRD+KP S++++A +K+ FG A+ E G
Sbjct: 136 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 189
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 88
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A ++ V
Sbjct: 149 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y LGRG FG+ + C E S+ Y MAK K+K + +++++EI I ++
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTY----MAKFVKVK-GTDQVLVKKEISILN-IARH 60
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHS 145
NI+ L + E + ++ E G D+F+RI + +ER+ + + A+ HS
Sbjct: 61 RNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS 120
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ H D++PEN + +R + +K+ +FG A
Sbjct: 121 HNIGHFDIRPENIIYQTRRSST-IKIIEFGQA 151
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 88
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 149 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
+Y LG G FGV + C E +T + K + Y + ++ EI I L
Sbjct: 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFI----NTPYPLDKYTVKNEISIMNQLH- 106
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCH 144
P ++ L A ED+ + +++E GG+LFDRI A+ Y SE + +R + H
Sbjct: 107 HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH 166
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++H D+KPEN ++ ++ +K+ DFG A
Sbjct: 167 EHSIVHLDIKPENIMCETKKASS-VKIIDFGLA 198
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KVTDFG A
Sbjct: 164 IYRDLKPENLMI---DQQGYIKVTDFGFA 189
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 66
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 127 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 73
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 134 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 67
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 128 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 31 RMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQ 86
++LG+G FG +L + S YA K + KK +K + +R +++ L+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDR---VRTKMERDILVEVNH 85
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P IV+L A + E ++++++ +GGDLF R+ + ++E D L + A++ HS+
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
G+++RDLKPEN D+ +K+TDFG
Sbjct: 146 GIIYRDLKPENILL---DEEGHIKLTDFG 171
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 84/149 (56%), Gaps = 11/149 (7%)
Query: 31 RMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQ 86
++LG+G FG +L + S YA K + KK +K + +R +++ L+
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDR---VRTKMERDILVEVNH 85
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P IV+L A + E ++++++ +GGDLF R+ + ++E D L + A++ HS+
Sbjct: 86 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 145
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
G+++RDLKPEN I D+ +K+TDFG
Sbjct: 146 GIIYRDLKPEN---ILLDEEGHIKLTDFG 171
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 92
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A ++ V
Sbjct: 153 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 83/149 (55%), Gaps = 11/149 (7%)
Query: 31 RMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-GQ 86
++LG+G FG +L + S YA K + KK +K + +R +++ L+
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVL-KKATLKVRDR---VRTKMERDILVEVNH 86
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P IV+L A + E ++++++ +GGDLF R+ + ++E D L + A++ HS+
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 146
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFG 175
G+++RDLKPEN D+ +K+TDFG
Sbjct: 147 GIIYRDLKPENILL---DEEGHIKLTDFG 172
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 68
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 129 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 69
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 130 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 2/131 (1%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ GR LG+G+FG YL E ++ A K + K +++ + +RREI+I+ L
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKS-QIEKEGVEHQLRREIEIQAHLH-H 82
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
PNI+ L + D +++++E G+L+ + + E+ A ++ + +A+ CH
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 147 GVMHRDLKPEN 157
V+HRD+KPEN
Sbjct: 143 KVIHRDIKPEN 153
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 89
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 150 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ--PN 88
+ LG G FG L T YA K + K+ +K E I + +R+L P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE----IEHTLNEKRILQAVNFPF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KVTDFG A
Sbjct: 163 IYRDLKPENLMI---DQQGYIKVTDFGLA 188
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 89
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 150 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 89
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 150 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 19/158 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG ID+
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG 340
EF ++ K SE + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 63 EFLTMMARKMKDTDSEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE---- 115
Query: 341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + +IDG+G +++ EFV +MT
Sbjct: 116 ------------VDEMIREANIDGDGQVNYEEFVQMMT 141
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
L+ ++ + D DGNG IDF EF+ +M K E + +AF+ DK+ + +I+ EL
Sbjct: 44 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNGYISAAELRHV 103
Query: 413 FKENNMGD---DATIKEIISEVGRD 434
N+G+ D + E+I E D
Sbjct: 104 M--TNLGEKLTDEEVDEMIREANID 126
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 4/143 (2%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
+LG G + YA K + K+ + + RE++ G NI+E
Sbjct: 20 LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQA----GHSRSRVFREVETLYQCQGNKNILE 75
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
L ED+T ++V E QGG + I + +++ER+A+ V+R + A++ H+ G+ HR
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHR 135
Query: 152 DLKPENFCFISRDDNALLKVTDF 174
DLKPEN S + + +K+ DF
Sbjct: 136 DLKPENILCESPEKVSPVKICDF 158
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KVTDFG A
Sbjct: 163 IYRDLKPENLMI---DQQGYIKVTDFGFA 188
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 92
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 153 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 96
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 157 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 95
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 155
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 156 IYRDLKPENLLI---DQQGYIQVTDFGFA 181
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 147
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 94
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G+L I G + E IV+A+ H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A + V
Sbjct: 155 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANXFV 198
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 278 DYTEFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K S E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 421
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 422 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 409 VM--TNLGEKLTDEEV 422
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 123
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 183
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 184 IYRDLKPENLLI---DQQGYIQVTDFGFA 209
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 43/190 (22%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLSG 85
Y +G+G +GV + EN T A K M K + D+ I+ E+++ + L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH- 86
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRI--------------------------- 118
PNI L +EDE + +VMELC GG L D++
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 119 ---IAKGYYSERDA----------APVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDD 165
I + R++ + ++R I +A++ H+ G+ HRD+KPENF F S +
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF-STNK 205
Query: 166 NALLKVTDFG 175
+ +K+ DFG
Sbjct: 206 SFEIKLVDFG 215
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDQMIREADIDGDGQVNYEEFVQMMT 147
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 109 VM--TNLGEKLTDEEV 122
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 89
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 149
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D+ ++VTDFG A
Sbjct: 150 IYRDLKPENLLI---DEQGYIQVTDFGFA 175
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 387
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 388 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 413
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 315 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 374
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 375 VM--TNLGEKLTDEEV 388
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 421
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 422 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 409 VM--TNLGEKLTDEEV 422
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 20/167 (11%)
Query: 213 VIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMD 272
+ + L E+ KE F D D +GT++ EL + +G TE +++ ++ D D
Sbjct: 3 AMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 273 GNGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI 331
GNG ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEK 119
Query: 332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 120 LTDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 150
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 52 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 111
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 112 VM--TNLGEKLTDEEV 125
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+
Sbjct: 62 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 118
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 119 TDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 148
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 50 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 109
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 110 VM--TNLGEKLTDEEV 123
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 330
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 331 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 387
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 388 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 413
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 315 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 374
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 375 VM--TNLGEKLTDEEV 388
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 109 VM--TNLGEKLTDEEV 122
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+ T
Sbjct: 62 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEXLT 118
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
D+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 119 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 109 VM--TNLGEXLTDEEV 122
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEXLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
D+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 108 VM--TNLGEXLTDEEV 121
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 109 VM--TNLGEKLTDEEV 122
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 365
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 366 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 422
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 423 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 448
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 350 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 409
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 410 VM--TNLGEKLTDEEV 423
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 327
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 328 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 384
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 385 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 410
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 312 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 371
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 372 VM--TNLGEKLTDEEV 385
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 6/148 (4%)
Query: 31 RMLGRGRFGVTYLCTENS---TNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
++LG G +G +L + S T YA K + K ++ A+ R E Q+ + P
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
+V L A + ET +H++++ GG+LF + + ++E + + IV A+ H +G
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLG 179
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
+++RD+K EN D N + +TDFG
Sbjct: 180 IIYRDIKLENILL---DSNGHVVLTDFG 204
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 147
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 109 VM--TNLGEKLTDEEV 122
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 365 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 421
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 422 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 409 VM--TNLGEKLTDEEV 422
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ--PN 88
+ LG G FG L T YA K + K+ +K E I + +R+L P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKE----IEHTLNEKRILQAVNFPF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLMI---DQQGYIQVTDFGLA 188
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 4/145 (2%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
LGRG+F V C ST YA K + K+ + + +++ EI + L P ++ L
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEIL--HEIAVLELAKSCPRVINL 94
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
+E+ + + +++E GG++F + + SE D +++ I+ V H ++H
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVH 154
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
DLKP+N S +K+ DFG
Sbjct: 155 LDLKPQNILLSSIYPLGDIKIVDFG 179
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 88
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 148
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 149 IYRDLKPENLLI---DQQGYIQVTDFGFA 174
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ FG++LG G F L E +T+ YA K + K+ +K + + R + RL
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--DH 91
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P V+L +D+ ++ + + G L I G + E IV+A+ H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
G++HRDLKPEN I +++ +++TDFG+A + E +A ++ V
Sbjct: 152 GIIHRDLKPEN---ILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E + +AF+ FDKD +G F + E + N+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVTMMT 147
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTD 334
G ID+ EF ++ K + E + +AF+ FDKD +G F + E + N+ TD
Sbjct: 61 GTIDFPEFLTMMARKMK-DSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKLTD 116
Query: 335 KAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 117 EE----------------VDEMIREADIDGDGQVNYEEFVTMMT 144
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + FI+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMK-DSEEEIREAFRVFDKDGNGFISAAELRHV 106
Query: 413 FKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 107 M--TNLGEKLTDEEV 119
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 118
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 119 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 46 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 105
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 106 VM--TNLGEKLTDEEV 119
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLII---DQQGYIQVTDFGFA 188
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E + +AF+ FDKD +G F + E + N+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIREADIDGDGQVNYEEFVTMMT 147
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLMI---DQQGYIQVTDFGFA 188
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+ T
Sbjct: 67 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLT 123
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
D+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 124 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 152
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 54 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 113
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 114 VM--TNLGEKLTDEEV 127
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
D+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 108 VM--TNLGEKLTDEEV 121
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 62
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 63 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 119
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 120 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 145
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 47 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 106
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 107 VM--TNLGEKLTDEEV 120
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 117
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 118 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 143
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 45 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 104
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 105 VM--TNLGEKLTDEEV 118
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T +A K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ +G G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GGD+F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KV DFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIKVADFGFA 188
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 61
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 62 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 118
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 119 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 46 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 105
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 106 VM--TNLGEKLTDEEV 119
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T +A K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 20/166 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E + +AF+ FDKD +G F + E + N+
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 TDEE----------------VDEMIRESDIDGDGQVNYEEFVTMMT 147
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + FI+ EL
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 109 VM--TNLGEKLTDEEV 122
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T +A K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ +G G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GGD+F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KV DFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIKVADFGFA 188
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
D+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 108 VM--TNLGEKLTDEEV 121
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 123
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 183
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 184 IYRDLKPENLLI---DQQGYIQVTDFGFA 209
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+ +L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KVTDFG A
Sbjct: 164 IYRDLKPENLMI---DQQGYIKVTDFGFA 189
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+ +L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KVTDFG A
Sbjct: 164 IYRDLKPENLMI---DQQGYIKVTDFGFA 189
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +G F + E + N+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
D+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVTMMT 146
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + FI+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 108 VM--TNLGEKLTDEEV 121
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG ID+
Sbjct: 3 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 62
Query: 281 EFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 63 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE--- 116
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 117 -------------VDEMIREADIDGDGQVNYEEFVQMMT 142
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 44 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 103
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 104 VM--TNLGEKLTDEEV 117
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +G F + E + N+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG---FISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
D+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVTMMT 146
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + FI+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 108 VM--TNLGEKLTDEEV 121
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KVTDFG A
Sbjct: 163 IYRDLKPENLMI---DQQGYIKVTDFGFA 188
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 210
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 196
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG ID+
Sbjct: 5 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFP 64
Query: 281 EFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 65 EFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE--- 118
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 119 -------------VDEMIREADIDGDGQVNYEEFVQMMT 144
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 46 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 105
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 106 VM--TNLGEKLTDEEV 119
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 75 REIQI-RRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ + +++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 183
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 183
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 195
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 196
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 16 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 75
Query: 75 REIQI-RRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ + +++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 76 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 183
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 195
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 196
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 75 REIQI-RRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ + +++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 182
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 195
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 95
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 155
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 156 IYRDLKPENLLI---DQQGYIQVTDFGFA 181
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 28 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 87
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 88 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 195
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 15 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 74
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 75 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 182
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 29 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 88
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 89 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 148
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 196
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 210
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 364
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF + K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 365 DFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 421
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 422 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 349 LQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 409 VM--TNLGEKLTDEEV 422
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 35 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 94
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 95 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 202
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G FG Y S N+P A K + K + E N +
Sbjct: 48 GKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 107
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 108 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 215
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
E+ KE F D D +GT++ EL + +G TE +++ ++ D DG+G ID+
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 281 EFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
EF ++ K S E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 367 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE--- 420
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 421 -------------VDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DG+G IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 348 LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH 407
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 408 VM--TNLGEKLTDEEV 421
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 346 QFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELL--------EKAFQYLD 397
+F ++ ++ L+G IDF E N++ + P+ L ++AF D
Sbjct: 268 KFEGDTLVNRIELKG-------IDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFD 320
Query: 398 KNSDQFITVNELETAFKENNMGDDAT---IKEIISEVGRD 434
K+ D IT EL T + ++G + T ++++I+EV D
Sbjct: 321 KDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDAD 358
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG+G I
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 364
Query: 278 DYTEFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K S E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 365 DFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 421
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 422 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 447
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DG+G IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 349 LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH 408
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 409 VM--TNLGEKLTDEEV 422
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 20/164 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
E L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF + ++ K + S E L +AF+ FD+D +G ++ + + + H+ T
Sbjct: 61 GTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNG------LISAAE----LRHVMT 110
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
+ +K + + +++ + DIDG+G+I++ EFV +M
Sbjct: 111 NLGEKL---------TDDEVDEMIREADIDGDGHINYEEFVRMM 145
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+ L E F D D NG +S ELR +T +G LT+ +V +++ AD+DG+G I+Y EF
Sbjct: 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Query: 284 AATIQR 289
+ +
Sbjct: 143 RMMVSK 148
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMT-DIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF++LM + + ++ E L +AF+ D++ + I+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH 107
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
N+G+ D + E+I E D
Sbjct: 108 VM--TNLGEKLTDDEVDEMIREADID 131
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G ++E A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
R LG G FG L T YA K + K+ K+K E+ + +R Q P
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++V+E GG++F + G +SE A IV HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KV DFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIKVADFGFA 189
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 20/159 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
E+ KE F D D +GT++ EL + +G TE +++ ++ D DG+G ID+
Sbjct: 307 EQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFP 366
Query: 281 EFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
EF ++ K S E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 367 EFLTMMARKMKYTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE--- 420
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 421 -------------VDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DG+G IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 348 LQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRH 407
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 408 VM--TNLGEKLTDEEV 421
Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 346 QFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELL--------EKAFQYLD 397
+F ++ ++ L+G IDF E N++ + P+ L ++AF D
Sbjct: 268 KFEGDTLVNRIELKG-------IDFKEDGNILGHKLEYNLPDQLTEEQIAEFKEAFSLFD 320
Query: 398 KNSDQFITVNELETAFKENNMGDDAT---IKEIISEVGRD 434
K+ D IT EL T + ++G + T ++++I+EV D
Sbjct: 321 KDGDGTITTKELGTVMR--SLGQNPTEAELQDMINEVDAD 358
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG+G I
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 355
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 356 DFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 412
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 413 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 438
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 24/157 (15%)
Query: 274 NGAIDYTEFTAATIQRQKL--ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI 331
NGA+ + R +L E+ +AF FDKD G + E +R++
Sbjct: 278 NGAVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTK---ELGTVMRSLGQN 334
Query: 332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLE 390
T+ L+ ++ + D DG+G IDF EF+ +M K ++ E +
Sbjct: 335 PTEAE----------------LQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIR 378
Query: 391 KAFQYLDKNSDQFITVNELETAFKENNMGDDATIKEI 427
+AF+ DK+ + +I+ EL N+G+ T +E+
Sbjct: 379 EAFRVFDKDGNGYISAAELRHVM--TNLGEKLTDEEV 413
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ +G G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G +SE A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KV DFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIKVADFGFA 188
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG+G I
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTI 363
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E + +AF+ FDKD +GY + E + N+ TD+
Sbjct: 364 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE 420
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + DIDG+G +++ EFV +MT
Sbjct: 421 ----------------VDEMIREADIDGDGQVNYEEFVQMMT 446
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DG+G IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 348 LQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 407
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 408 VM--TNLGEKLTDEEV 421
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 97
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 157
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 158 IYRDLKPENLLI---DQQGYIQVTDFGFA 183
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 164 IYRDLKPENLLI---DQQGYIQVTDFGFA 189
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 99/216 (45%), Gaps = 30/216 (13%)
Query: 182 EEGGEASDDTSVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNGT 240
E G E + I M++F+ KL + + + L EET+ L + F +D + +G
Sbjct: 20 ESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQ 79
Query: 241 LSYDELRAGLTKV-GSMLTEFDVKQL-------MEAADMDGNGAIDYTEFTAATIQRQKL 292
L EL G +K+ G + FD+ Q+ + AAD D NG IDY+EF + R+ L
Sbjct: 80 LDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSL 139
Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
+ L AFQ FD+D +G + V+ ++ + H+ +
Sbjct: 140 LSKDKLESAFQKFDQDGNG----KISVDELASVFGLDHLES-----------------KT 178
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPEL 388
K+++ D + +G++DF EF ++ + P+L
Sbjct: 179 WKEMISGIDSNNDGDVDFEEFCKMIQKLCSNNEPQL 214
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
E ++ L+ F++ DK+ G ++ + I S + ++ F L + +
Sbjct: 60 EETKELTDIFRHIDKNGDG------QLDRQELIDGYSKLSGEEVAVFDLPQIE-----SE 108
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELETA 412
+ ++ D D NG ID+ EFV + D L + + LE AFQ D++ + I+V+EL +
Sbjct: 109 VDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV 168
Query: 413 FKENNMGDDATIKEIISEV 431
F +++ + T KE+IS +
Sbjct: 169 FGLDHL-ESKTWKEMISGI 186
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
D+ + +++ + +IDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREANIDGDGQVNYEEFVQMMT 146
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
N+G+ D + E+I E D
Sbjct: 108 VM--TNLGEKLTDEEVDEMIREANID 131
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREI-QIRRLL 83
Y G +LG G FG Y S N+P A K + K + E N + E+ ++++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
SG ++ L E + +++E + DLFD I +G E A ++ AV
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 126 CHNXGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 163
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
Y G +LG G FG Y S N+P A K + K + E N + E+ + +++
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
SG ++ L E + +++E + DLFD I +G E A ++ AV
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 167
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
Y G +LG G FG Y S N+P A K + K + E N + E+ + +++
Sbjct: 10 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 69
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
SG ++ L E + +++E + DLFD I +G E A ++ AV
Sbjct: 70 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 129
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 130 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 167
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +GY + E + N+ T
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
D+ + +++ + DIDG+G +++ EFV +MT
Sbjct: 118 DEE----------------VDEMIREADIDGDGQVNYEEFVQMMT 146
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DG+G IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 48 LQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 108 VM--TNLGEKLTDEEV 121
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
Y G +LG G FG Y S N+P A K + K + E N + E+ + +++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
SG ++ L E + +++E + DLFD I +G E A ++ AV
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 168
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 123
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 183
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 184 IYRDLKPENLLI---DQQGYIQVTDFGFA 209
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSG 85
+S R++GRG FG Y C + T YA K + KK KMK E + + I + + +G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTG 249
Query: 86 Q-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P IV + A + +++L GGDL + G +SE D I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
+ V++RDLKP N I D++ ++++D G A F ++ AS T
Sbjct: 310 NRFVVYRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHASVGT 353
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
Y G +LG G FG Y S N+P A K + K + E N + E+ + +++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
SG ++ L E + +++E + DLFD I +G E A ++ AV
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 168
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSG 85
+S R++GRG FG Y C + T YA K + KK KMK E + + I + + +G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTG 249
Query: 86 Q-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P IV + A + +++L GGDL + G +SE D I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
+ V++RDLKP N I D++ ++++D G A F ++ AS T
Sbjct: 310 NRFVVYRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHASVGT 353
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
Y G +LG G FG Y S N+P A K + K + E N + E+ + +++
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
SG ++ L E + +++E + DLFD I +G E A ++ AV
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 128
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 129 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 166
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSG 85
+S R++GRG FG Y C + T YA K + KK KMK E + + I + + +G
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTG 248
Query: 86 Q-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P IV + A + +++L GGDL + G +SE D I+ + H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
+ V++RDLKP N I D++ ++++D G A F ++ AS T
Sbjct: 309 NRFVVYRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHASVGT 352
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREI-QIRRLL 83
Y G +LG G FG Y S N+P A K + K + E N + E+ ++++
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
SG ++ L E + +++E + DLFD I +G E A ++ AV
Sbjct: 93 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 152
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 153 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 190
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L T YA K + K+ K+K E+ + +R +Q P
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 103
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+ +L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 163
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D +KVTDFG A
Sbjct: 164 IYRDLKPENLMI---DQQGYIKVTDFGFA 189
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKP-KMKYAENDMMIRREIQIRRLLSG 85
+S R++GRG FG Y C + T YA K + KK KMK E + + I + + +G
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGET-LALNERIMLSLVSTG 249
Query: 86 Q-PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P IV + A + +++L GGDL + G +SE D I+ + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
+ V++RDLKP N I D++ ++++D G A F ++ AS T
Sbjct: 310 NRFVVYRDLKPAN---ILLDEHGHVRISDLGLACDFSKKKPHASVGT 353
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKP--KMKYAENDMMIRREIQIRRLLSGQPN 88
+ LG G FG L + YA K + K+ K+K E+ + +R +Q P
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF----PF 102
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V+L+ + +D + +++VME GG++F + G + E A IV HS+ +
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDL 162
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
++RDLKPEN D ++VTDFG A
Sbjct: 163 IYRDLKPENLLI---DQQGYIQVTDFGFA 188
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREI-QIRRLL 83
Y G +LG G FG Y S N+P A K + K + E N + E+ ++++
Sbjct: 11 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 70
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
SG ++ L E + +++E + DLFD I +G E A ++ AV
Sbjct: 71 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 130
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 131 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 168
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQI-RRLL 83
Y G +LG G FG Y S N+P A K + K + E N + E+ + +++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
SG ++ L E + +++E + DLFD I +G E A ++ AV
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 163
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREI-QIRRLL 83
Y G +LG G FG Y S N+P A K + K + E N + E+ ++++
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
SG ++ L E + +++E + DLFD I +G E A ++ AV
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRH 125
Query: 143 CHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 126 CHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 163
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E L +AF+ FDKD +G F + E + N+ T
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNG---FISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
D+ + +++ + D+DG+G +++ EFV +M
Sbjct: 118 DEE----------------VDEMIREADVDGDGQVNYEEFVQVM 145
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+NLM K ++ E L++AF+ DK+ + FI+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRH 107
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
N+G+ D + E+I E D
Sbjct: 108 VM--TNLGEKLTDEEVDEMIREADVD 131
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 20/161 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF ++ K + E L +AF+ FDKD +G F + E + N+ TD+
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNG---FISAAELRHVMTNLGEKLTDEE 117
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
+ +++ + D+DG+G +++ EFV +M
Sbjct: 118 ----------------VDEMIREADVDGDGQVNYEEFVQVM 142
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+NLM K ++ E L++AF+ DK+ + FI+ EL
Sbjct: 45 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRH 104
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
N+G+ D + E+I E D
Sbjct: 105 VM--TNLGEKLTDEEVDEMIREADVD 128
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E L +AF+ FDKD +G F + E + N+ T
Sbjct: 61 GTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNG---FISAAELRHVMTNLGEKLT 117
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
D+ + +++ + D+DG+G +++ EFV +M
Sbjct: 118 DEE----------------VDEMIREADVDGDGQVNYEEFVQVM 145
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+NLM K ++ E L++AF+ DK+ + FI+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRH 107
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
N+G+ D + E+I E D
Sbjct: 108 VM--TNLGEKLTDEEVDEMIREADVD 131
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG I
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 63
Query: 278 DYTEFTAATIQRQKLERS-EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF + ++ K + S E L +AF+ FD+D +G ++ + + + H+ T+
Sbjct: 64 DFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNG------LISAAE----LRHVMTNLG 113
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
+K + + +++ + DIDG+G+I++ EFV +M
Sbjct: 114 EKL---------TDDEVDEMIREADIDGDGHINYEEFVRMM 145
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+ L E F D D NG +S ELR +T +G LT+ +V +++ AD+DG+G I+Y EF
Sbjct: 83 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Query: 284 AATIQR 289
+ +
Sbjct: 143 RMMVSK 148
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMT-DIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF++LM + + ++ E L +AF+ D++ + I+ EL
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH 107
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
N+G+ D + E+I E D
Sbjct: 108 VM--TNLGEKLTDDEVDEMIREADID 131
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 84/164 (51%), Gaps = 12/164 (7%)
Query: 16 LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
+G+ ED + G +LG+G F Y T + A K + KK K A ++
Sbjct: 6 IGEKIED----FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQN 60
Query: 76 EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY--YSERDAAPVL 133
E++I L P+I+EL + ED V++V+E+C G++ +R + +SE +A +
Sbjct: 61 EVKIHCQLK-HPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEARHFM 118
Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS G++HRDL N ++R+ N +K+ DFG A
Sbjct: 119 HQIITGMLYLHSHGILHRDLTLSNL-LLTRNMN--IKIADFGLA 159
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L ++ KE F D D +G ++ EL + +G TE +++ ++ D DG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E L +AF+ FDKD +G F + E + N+
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG---FISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
TD+ + +++ + D+DG+G I++ EFV +M
Sbjct: 118 TDEE----------------VDEMIREADVDGDGQINYEEFVKVM 146
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+NLM K ++ E L++AF+ DK+ + FI+ EL
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
N+G+ D + E+I E D
Sbjct: 109 VM--TNLGEKLTDEEVDEMIREADVD 132
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL--- 83
Y G +LG+G FG + + + A K + + + ++ + +++ L
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 84 --SGQPNIVELKSAHEDETAVHVVME-LCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
G P ++ L E + +V+E DLFD I KG E + +V A+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
CHS GV+HRD+K EN R A K+ DFGS L +E D T V
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLHDEPYTDFDGTRV 203
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 20/165 (12%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
+ + L ++ KE F D D +G ++ EL + +G TE +++ ++ D DG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 274 NGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG ID+ EF ++ K + E L +AF+ FDKD +G F + E + N+
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNG---FISAAELRHVMTNLGEKL 117
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
TD+ + +++ + D+DG+G I++ EFV +M
Sbjct: 118 TDEE----------------VDEMIREADVDGDGQINYDEFVKVM 146
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ ++ + D DGNG IDF EF+NLM K ++ E L++AF+ DK+ + FI+ EL
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRH 108
Query: 412 AFKENNMGD---DATIKEIISEVGRD 434
N+G+ D + E+I E D
Sbjct: 109 VM--TNLGEKLTDEEVDEMIREADVD 132
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y LG G YL + N+ A K++ P+ K E RE+ LS Q
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREK-EETLKRFEREVHNSSQLSHQ 71
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
NIV + E++ ++VME +G L + I + G S A I++ + H M
Sbjct: 72 -NIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
++HRD+KP+N D N LK+ DFG A E
Sbjct: 131 RIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSE 163
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 85/166 (51%), Gaps = 10/166 (6%)
Query: 21 EDVML-HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM--IRREI 77
EDV H+ R +G+G FG + +N T YA K M K+ K E + + + +E+
Sbjct: 10 EDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQ---KCVERNEVRNVFKEL 66
Query: 78 QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
QI + L P +V L + +DE + +V++L GGDL + ++ E + +V
Sbjct: 67 QIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELV 125
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
A++ + ++HRD+KP+N I D++ + +TDF A + E
Sbjct: 126 MALDYLQNQRIIHRDMKPDN---ILLDEHGHVHITDFNIAAMLPRE 168
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
M Y GR LG+G F Y T+ T +A K + K +K + + M EI I + L
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSL 83
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
P++V ED+ V+VV+E+C+ L + + +E +A +R + V
Sbjct: 84 D-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 142
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
H+ V+HRDLK N +D+ +K+ DFG A E +G D
Sbjct: 143 HNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKD 185
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
M Y GR LG+G F Y T+ T +A K + K +K + + M EI I + L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSL 99
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
P++V ED+ V+VV+E+C+ L + + +E +A +R + V
Sbjct: 100 D-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASD 189
H+ V+HRDLK N +D+ +K+ DFG A E +G D
Sbjct: 159 HNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKKD 201
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 24/164 (14%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR-----LLSG 85
+++GRG F + T YA K M K DM+ R E+ R L++G
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW--------DMLKRGEVSCFREERDVLVNG 118
Query: 86 -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR----AIVNAV 140
+ I +L A +DE +++VME GGDL +++K + ER A + R IV A+
Sbjct: 119 DRRWITQLHFAFQDENYLYLVMEYYVGGDLL-TLLSK--FGERIPAEMARFYLAEIVMAI 175
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
+ H +G +HRD+KP+N I D +++ DFGS L +G
Sbjct: 176 DSVHRLGYVHRDIKPDN---ILLDRCGHIRLADFGSCLKLRADG 216
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 20/161 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ Q ++E F DTD +GT+ EL+ + +G + ++K+++ D DG+G I
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 278 DYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF T T + + + E + KAF+ FD DNSG TI+++ + A
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSG----------TITIKDLRRV----A 127
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
K+ G T++ L++++ + D + + ID EF+ +M
Sbjct: 128 KELGENLTEE-----ELQEMIAEADRNDDNEIDEDEFIRIM 163
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMT-DIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
+KK++ + D DG+G IDF EF+ +MT + + ++ E + KAF+ D ++ IT+ +L
Sbjct: 66 IKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRR 125
Query: 412 AFKENNMGDDAT---IKEIISEVGRD 434
KE +G++ T ++E+I+E R+
Sbjct: 126 VAKE--LGENLTEEELQEMIAEADRN 149
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL +G TE +++ + D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 61
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +GY + + H+ T
Sbjct: 62 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGY----------ISAAELRHVXT 111
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +K + + + + DIDG+G +++ EFV T
Sbjct: 112 NLGEKL---------TDEEVDQXIREADIDGDGQVNYEEFVQXXT 147
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ + + D DGNG IDF EF+ K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 49 LQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRH 108
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 109 V--XTNLGEKLTDEEV 122
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL +G TE +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G ID+ EF ++ K + E + +AF+ FDKD +GY + + H+ T
Sbjct: 61 GTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGY----------ISAAELRHVXT 110
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +K + + + + DIDG+G +++ EFV T
Sbjct: 111 NLGEKL---------TDEEVDEXIREADIDGDGQVNYEEFVQXXT 146
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ + + D DGNG IDF EF+ K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 48 LQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 108 V--XTNLGEKLTDEEV 121
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
M Y GR LG+G F Y T+ T +A K + K +K + + M EI I + L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSL 99
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
P++V ED+ V+VV+E+C+ L + + +E +A +R + V
Sbjct: 100 D-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
H+ V+HRDLK N +D+ +K+ DFG A E +G
Sbjct: 159 HNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDG 196
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDY 279
+ + E F ++DT+ NG+LS+ E+ L VG + ++D+ ++++A D++ G I Y
Sbjct: 35 NNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDINDRGNITY 92
Query: 280 TEFTAATIQRQKLERSEYLSKAFQYFDKDNSGY 312
TEF A + + +E S +L AF DKD GY
Sbjct: 93 TEFMAGCYRWKNIE-STFLKAAFNKIDKDEDGY 124
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 24 MLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
M Y GR LG+G F Y T+ T +A K + K +K + + M EI I + L
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKM-STEIAIHKSL 99
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
P++V ED+ V+VV+E+C+ L + + +E +A +R + V
Sbjct: 100 D-NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYL 158
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
H+ V+HRDLK N +D+ +K+ DFG A E +G
Sbjct: 159 HNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDG 196
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 6/150 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE-NDMMIRREIQIRRLLSG 85
+ F +++G+G FG L + + YA K + KK +K E +M R + ++ +
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV--K 97
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
P +V L + + ++ V++ GG+LF + + + E A I +A+ HS
Sbjct: 98 HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHS 157
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ +++RDLKPEN I D + +TDFG
Sbjct: 158 LNIVYRDLKPEN---ILLDSQGHIVLTDFG 184
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
+ + ++LG+G FG L E +T YA K + K+ + E + + R+L
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 62
Query: 86 -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P + LK A + + VME GG+LF + + ++E A IV+A+ H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V++RD+K EN D + +K+TDFG
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFG 150
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
+ + ++LG+G FG L E +T YA K + K+ + E + + R+L
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 67
Query: 86 -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P + LK A + + VME GG+LF + + ++E A IV+A+ H
Sbjct: 68 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 127
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V++RD+K EN D + +K+TDFG
Sbjct: 128 SRDVVYRDIKLENLML---DKDGHIKITDFG 155
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +G ++ EL + +G TE +++ +M D DGN
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G +D+ EF ++ K + E + +AF+ FDKD +G+ + + H+ T
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGF----------VSAAELRHVMT 110
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
+K + + +++ D DG+G +++ EFV ++
Sbjct: 111 RLGEKL---------SDEEVDEMIRAADTDGDGQVNYEEFVRVL 145
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+ ++E F D D NG +S ELR +T++G L++ +V +++ AAD DG+G ++Y EF
Sbjct: 83 EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFV 142
Query: 284 AATIQR 289
+ +
Sbjct: 143 RVLVSK 148
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV 357
+AF FDKD G R E +R++ T+ L+ ++
Sbjct: 12 FKEAFSLFDKDGDGCITTR---ELGTVMRSLGQNPTEAE----------------LRDMM 52
Query: 358 LQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNEL 409
+ D DGNG +DF EF+ +M K + E + +AF+ DK+ + F++ EL
Sbjct: 53 SEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAEL 105
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
+ + ++LG+G FG L E +T YA K + K+ + E + + R+L
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 65
Query: 86 -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P + LK A + + VME GG+LF + + ++E A IV+A+ H
Sbjct: 66 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 125
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V++RD+K EN D + +K+TDFG
Sbjct: 126 SRDVVYRDIKLENLML---DKDGHIKITDFG 153
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
+ + ++LG+G FG L E +T YA K + K+ + E + + R+L
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 62
Query: 86 -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P + LK A + + VME GG+LF + + ++E A IV+A+ H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V++RD+K EN D + +K+TDFG
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFG 150
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
+ + ++LG+G FG L E +T YA K + K+ + E + + R+L
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 62
Query: 86 -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P + LK A + + VME GG+LF + + ++E A IV+A+ H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V++RD+K EN D + +K+TDFG
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFG 150
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
+ + ++LG+G FG L E +T YA K + K+ + E + + R+L
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 62
Query: 86 -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P + LK A + + VME GG+LF + + ++E A IV+A+ H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V++RD+K EN D + +K+TDFG
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFG 150
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 10/152 (6%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM--MIRREIQIRRLLSGQPNIV 90
LG G +G Y + TN A K + ++++ E + RE+ + + L + NI+
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI----RLEHEEEGVPGTAIREVSLLKELQHR-NII 96
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
ELKS +H++ E + DL + S R L ++N VN CHS +H
Sbjct: 97 ELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLH 155
Query: 151 RDLKPENFCFISRD--DNALLKVTDFGSALLF 180
RDLKP+N D + +LK+ DFG A F
Sbjct: 156 RDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG- 85
+ + ++LG+G FG L E +T YA K + K+ + E + + R+L
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDE----VAHTVTESRVLQNT 62
Query: 86 -QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P + LK A + + VME GG+LF + + ++E A IV+A+ H
Sbjct: 63 RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V++RD+K EN D + +K+TDFG
Sbjct: 123 SRDVVYRDIKLENLML---DKDGHIKITDFG 150
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 21/155 (13%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLLSGQPN 88
R LG G FG +L YA K + K+ ++K E+ R + I P
Sbjct: 12 RTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSI----VTHPF 67
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC----- 143
I+ + +D + ++M+ +GG+LF ++ K S+R PV A A VC
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRK---SQRFPNPV--AKFYAAEVCLALEY 121
Query: 144 -HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
HS +++RDLKPEN I D N +K+TDFG A
Sbjct: 122 LHSKDIIYRDLKPEN---ILLDKNGHIKITDFGFA 153
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +G ++ +EL + + TE +++ ++ D DGNG I
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 278 DYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
++ EF + ++ K + E L +AF+ FDKD +GY + E + N+ TD+
Sbjct: 64 EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGY---ISASELRHVMINLGEKLTDEE 120
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
+++++ + D+DG+G +++ EFV +M
Sbjct: 121 ----------------VEQMIKEADLDGDGQVNYEEFVKMM 145
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 22/129 (17%)
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF FDKD G + E IR++ T++ L+ ++ +
Sbjct: 14 EAFGLFDKDGDGC---ITVEELATVIRSLDQNPTEEE----------------LQDMISE 54
Query: 360 GDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELETAFKENNM 418
D DGNG I+F EF++LM K + E L++AF+ DK+ + +I+ +EL N+
Sbjct: 55 VDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMI--NL 112
Query: 419 GDDATIKEI 427
G+ T +E+
Sbjct: 113 GEKLTDEEV 121
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 16 LGKPYEDVMLH-YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
L KP V ++ + + ++LG+G FG L E +T YA K + K+ + E +
Sbjct: 141 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VA 196
Query: 75 REIQIRRLL--SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
+ R+L S P + LK + + + VME GG+LF + + +SE A
Sbjct: 197 HTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 256
Query: 133 LRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
IV+A++ HS V++RDLK EN D + +K+TDFG
Sbjct: 257 GAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFG 297
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
Query: 16 LGKPYEDVMLH-YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR 74
L KP V ++ + + ++LG+G FG L E +T YA K + K+ + E +
Sbjct: 138 LAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VA 193
Query: 75 REIQIRRLL--SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
+ R+L S P + LK + + + VME GG+LF + + +SE A
Sbjct: 194 HTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 253
Query: 133 LRAIVNAVNVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
IV+A++ HS V++RDLK EN D + +K+TDFG
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFG 294
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
R+LG+G FG C +T YACK + KK ++K + + M E QI ++ + +V
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKK-RIKKRKGEAMALNEKQILEKVNSR-FVV 247
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC------H 144
L A+E + A+ +V+ L GGDL I Y+ + P RA+ A +C H
Sbjct: 248 SLAYAYETKDALCLVLTLMNGGDLKFHI----YHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
+++RDLKPEN I DD+ ++++D G A+ E
Sbjct: 304 RERIVYRDLKPEN---ILLDDHGHIRISDLGLAVHVPE 338
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 15/158 (9%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
R+LG+G FG C +T YACK + KK ++K + + M E QI ++ + +V
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKK-RIKKRKGEAMALNEKQILEKVNSR-FVV 247
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC------H 144
L A+E + A+ +V+ L GGDL I Y+ + P RA+ A +C H
Sbjct: 248 SLAYAYETKDALCLVLTLMNGGDLKFHI----YHMGQAGFPEARAVFYAAEICCGLEDLH 303
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
+++RDLKPEN I DD+ ++++D G A+ E
Sbjct: 304 RERIVYRDLKPEN---ILLDDHGHIRISDLGLAVHVPE 338
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
+G G +GV + C T A K + +E+D +I+ REI++ + L PN
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLE------SEDDPVIKKIALREIRMLKQLK-HPN 63
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+V L + +H+V E C L + + E + + AVN CH
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRD+KPEN I++ ++++K+ DFG A L
Sbjct: 124 IHRDVKPENI-LITK--HSVIKLCDFGFARLL 152
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI 79
Y M Y + +G G FG L Y K + +M E + RRE+ +
Sbjct: 19 YFQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKEREES-RREVAV 76
Query: 80 RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA-KG-YYSERDAAPVLRAIV 137
+ PNIV+ + + E+ ++++VM+ C+GGDLF RI A KG + E I
Sbjct: 77 LANMK-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQIC 135
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
A+ H ++HRD+K +N F+++D +++ DFG A
Sbjct: 136 LALKHVHDRKILHRDIKSQNI-FLTKDGT--VQLGDFGIA 172
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 90/202 (44%), Gaps = 33/202 (16%)
Query: 191 TSVILRMKQFRRMSKLKKLTVKVIVEYLPG-EETQALKEKFIEMDTDKNGTLSYDELRAG 249
T + MK+F+ KL + + + L EET+ L + F ++D + +G L EL G
Sbjct: 6 TGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEG 65
Query: 250 LTKV----GSMLTEFD-------VKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYL 298
K+ G +++ D V ++++ D D NG I+Y+EF + +Q L E L
Sbjct: 66 YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 125
Query: 299 SKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVL 358
AFQ FD D SG I N + + FG+ +L++
Sbjct: 126 LAAFQQFDSDGSG------------KITN-----EELGRLFGVTEVDDETWHQVLQEC-- 166
Query: 359 QGDIDGNGNIDFIEFVNLMTDI 380
D + +G +DF EFV +M I
Sbjct: 167 --DKNNDGEVDFEEFVEMMQKI 186
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
Query: 292 LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMN 351
LE ++ L++ F+ D + G + + ++E R + D ++ Q A
Sbjct: 36 LEETKELTQIFRQLDNNGDGQLDRKELIEG---YRKLMQWKGDTVSDL---DSSQIEAE- 88
Query: 352 MLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
+ ++ D D NG I++ EFV + D L + E L AFQ D + IT EL
Sbjct: 89 -VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGR 147
Query: 412 AFKENNMGDDATIKEIISEVGRDH 435
F + DD T +++ E +++
Sbjct: 148 LFGVTEV-DDETWHQVLQECDKNN 170
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
+LG G C T+ YA K + K+P + + RE+++ G N++E
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR----VFREVEMLYQCQGHRNVLE 75
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
L E+E ++V E +GG + I + +++E +A+ V++ + +A++ H+ G+ HR
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHR 135
Query: 152 DLKPENFCFISRDDNALLKVTDFG 175
DLKPEN + + +K+ DFG
Sbjct: 136 DLKPENILCEHPNQVSPVKICDFG 159
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 77/164 (46%), Gaps = 30/164 (18%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS--GQPN 88
RM G+G FG L E ST M A K + + P+ + RE+QI + L+ PN
Sbjct: 29 RMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFR--------NRELQIMQDLAVLHHPN 80
Query: 89 IVELKS-----AHEDETAVH--VVMELCQGGDLFDRIIAKGYYSERDAAP------VLRA 135
IV+L+S D ++ VVME D R + YY + A P L
Sbjct: 81 IVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHR-CCRNYYRRQVAPPPILIKVFLFQ 137
Query: 136 IVNAVNVCH--SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++ ++ H S+ V HRD+KP N + + + LK+ DFGSA
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHN--VLVNEADGTLKLCDFGSA 179
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 20/165 (12%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL +G TE +++ + D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYT 333
G I++ EF + K + E + +AF+ FDKD +GY + + H+ T
Sbjct: 61 GTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGY----------ISAAELRHVXT 110
Query: 334 DKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +K + + + + DIDG+G +++ EFV T
Sbjct: 111 NLGEKL---------TDEEVDEXIREADIDGDGQVNYEEFVQXXT 146
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNELET 411
L+ + + D DGNG I+F EF+ K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 48 LQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRH 107
Query: 412 AFKENNMGDDATIKEI 427
N+G+ T +E+
Sbjct: 108 V--XTNLGEKLTDEEV 121
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 31 RMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
R+LG+G +G + T +T +A K + K ++ A++ + E I + P
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
IV+L A + +++++E GG+LF ++ +G + E A L I A+ H G
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
+++RDLKPEN I + +K+TDFG
Sbjct: 142 IIYRDLKPEN---IMLNHQGHVKLTDFG 166
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 31 RMLGRGRFGVTYLC---TENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
R+LG+G +G + T +T +A K + K ++ A++ + E I + P
Sbjct: 23 RVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
IV+L A + +++++E GG+LF ++ +G + E A L I A+ H G
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFG 175
+++RDLKPEN I + +K+TDFG
Sbjct: 142 IIYRDLKPEN---IMLNHQGHVKLTDFG 166
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
M + + ++LG+G FG L E +T YA K + K+ + E + + R+
Sbjct: 6 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRV 61
Query: 83 L--SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L S P + LK + + + VME GG+LF + + +SE A IV+A+
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 121
Query: 141 NVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ HS V++RDLK EN D + +K+TDFG
Sbjct: 122 DYLHSEKNVVYRDLKLENLML---DKDGHIKITDFG 154
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
M + + ++LG+G FG L E +T YA K + K+ + E + + R+
Sbjct: 7 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRV 62
Query: 83 L--SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L S P + LK + + + VME GG+LF + + +SE A IV+A+
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 122
Query: 141 NVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ HS V++RDLK EN D + +K+TDFG
Sbjct: 123 DYLHSEKNVVYRDLKLENLML---DKDGHIKITDFG 155
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 3 CCVSKSQRQRYPI----LGKPY----EDVMLH---YSFGRMLGRGRFGVTYLCTENSTNM 51
C S +R +Y KP+ +++ LH + +++GRG FG + +T
Sbjct: 41 CSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTER 100
Query: 52 PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-IVELKSAHEDETAVHVVMELCQ 110
YA K + K +K AE R E + L++G I L A +DE +++VM+
Sbjct: 101 IYAMKILNKWEMLKRAET-ACFREERDV--LVNGDCQWITALHYAFQDENHLYLVMDYYV 157
Query: 111 GGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL 168
GGDL +++K E A + +V A++ H + +HRD+KP+N + D N
Sbjct: 158 GGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDN---VLLDVNGH 213
Query: 169 LKVTDFGSALLFEEEG 184
+++ DFGS L ++G
Sbjct: 214 IRLADFGSCLKMNDDG 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 3 CCVSKSQRQRYPI----LGKPY----EDVMLH---YSFGRMLGRGRFGVTYLCTENSTNM 51
C S +R +Y KP+ +++ LH + +++GRG FG + +T
Sbjct: 57 CSHSALRRDKYVAEFLEWAKPFTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTER 116
Query: 52 PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-IVELKSAHEDETAVHVVMELCQ 110
YA K + K +K AE R E + L++G I L A +DE +++VM+
Sbjct: 117 IYAMKILNKWEMLKRAET-ACFREERDV--LVNGDCQWITALHYAFQDENHLYLVMDYYV 173
Query: 111 GGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNAL 168
GGDL +++K E A + +V A++ H + +HRD+KP+N + D N
Sbjct: 174 GGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDN---VLLDVNGH 229
Query: 169 LKVTDFGSALLFEEEG 184
+++ DFGS L ++G
Sbjct: 230 IRLADFGSCLKMNDDG 245
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 10/156 (6%)
Query: 23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
M + + ++LG+G FG L E +T YA K + K+ + E + + R+
Sbjct: 8 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE----VAHTLTENRV 63
Query: 83 L--SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L S P + LK + + + VME GG+LF + + +SE A IV+A+
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 123
Query: 141 NVCHS-MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ HS V++RDLK EN D + +K+TDFG
Sbjct: 124 DYLHSEKNVVYRDLKLENLML---DKDGHIKITDFG 156
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 72/157 (45%), Gaps = 14/157 (8%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y R LGRG++ + + N K + K K I+REI+I L G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNK-------IKREIKILENLRGG 91
Query: 87 PNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
PNI+ L +D + +V E D F ++ ++ D + I+ A++ CH
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKALDYCH 148
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
SMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 149 SMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ +LG G +GV T T A K + K +A + REI+I + +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL---REIKILKHFKHE 69
Query: 87 PNIVEL-----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
NI+ + + E+ V+++ EL Q R+I+ S+ + + AV
Sbjct: 70 -NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
V H V+HRDLKP N + N LKV DFG A + +E + S+ T
Sbjct: 127 VLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPT 173
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ +LG G +GV T T A K + K +A + REI+I + +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL---REIKILKHFKHE 69
Query: 87 PNIVEL-----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
NI+ + + E+ V+++ EL Q R+I+ S+ + + AV
Sbjct: 70 -NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
V H V+HRDLKP N + N LKV DFG A + +E + S+ T
Sbjct: 127 VLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPT 173
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 14/170 (8%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ +LG G +GV T T A K + K +A + REI+I + +
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTL---REIKILKHFKHE 69
Query: 87 PNIVEL-----KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
NI+ + + E+ V+++ EL Q R+I+ S+ + + AV
Sbjct: 70 -NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVK 126
Query: 142 VCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
V H V+HRDLKP N + N LKV DFG A + +E + S+ T
Sbjct: 127 VLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPT 173
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
+G G G+ + T S+ A K M K+ + + N+++I R+ Q N+V
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 80
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
E+ +++ + VVME +GG L D I+ +E A V A++ A++V H+ GV+H
Sbjct: 81 EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 139
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RD+K ++ ++ D +K++DFG
Sbjct: 140 RDIKSDSI-LLTHDGR--VKLSDFG 161
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
+G G G+ + T S+ A K M K+ + + N+++I R+ Q N+V
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 84
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
E+ +++ + VVME +GG L D I+ +E A V A++ A++V H+ GV+H
Sbjct: 85 EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 143
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RD+K ++ ++ D +K++DFG
Sbjct: 144 RDIKSDSI-LLTHDGR--VKLSDFG 165
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
+LG G C T+ YA K + K+P + + RE+++ G N++E
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSR----VFREVEMLYQCQGHRNVLE 75
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
L E+E ++V E +GG + I + +++E +A+ V++ + +A++ H+ G+ HR
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHR 135
Query: 152 DLKPENFCFISRDDNALLKVTDF 174
DLKPEN + + +K+ DF
Sbjct: 136 DLKPENILCEHPNQVSPVKICDF 158
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
+G G G+ + T S+ A K M K+ + + N+++I R+ Q N+V
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 91
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
E+ +++ + VVME +GG L D I+ +E A V A++ A++V H+ GV+H
Sbjct: 92 EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 150
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RD+K ++ + +K++DFG
Sbjct: 151 RDIKSDSILL---THDGRVKLSDFG 172
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 20/161 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ Q ++E F DTD +GT+ EL+ + +G + ++K+++ D DG+G I
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 278 DYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
D+ EF T + + + E + KAF+ FD D +G F +N+ + A
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISF----------KNLKRV----A 107
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
K+ G T + L++++ + D DG+G ++ EF +M
Sbjct: 108 KELGENMTDE-----ELQEMIDEADRDGDGEVNEEEFFRIM 143
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMT-DIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
+KK++ D DG+G IDF EF+ +MT + + ++ E + KAF+ D + I+ L+
Sbjct: 46 IKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKR 105
Query: 412 AFKE--NNMGDDATIKEIISEVGRD 434
KE NM D+ ++E+I E RD
Sbjct: 106 VAKELGENMTDEE-LQEMIDEADRD 129
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 13/145 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
+G G G+ + T S+ A K M K+ + + N+++I R+ Q N+V
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 89
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
E+ +++ + VVME +GG L D I+ +E A V A++ A++V H+ GV+H
Sbjct: 90 EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 148
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RD+K ++ ++ D +K++DFG
Sbjct: 149 RDIKSDSI-LLTHDGR--VKLSDFG 170
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 77/159 (48%), Gaps = 20/159 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
E+ KE F D D +G ++ +L + +G TE +++ ++ DGNG ID+
Sbjct: 308 EQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFP 367
Query: 281 EFTAATIQRQK-LERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
+F ++ K + E + +AF+ F KD +GY + + Q + H+ T+ +K
Sbjct: 368 QFLTMMARKMKDTDSEEEIREAFRVFGKDGNGY------ISAAQ----LRHVMTNLGEKL 417
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+ +++ + IDG+G +++ +FV +MT
Sbjct: 418 ---------TDEEVDEMIREAGIDGDGQVNYEQFVQMMT 447
Score = 28.9 bits (63), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Query: 346 QFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELL--------EKAFQYLD 397
+F ++ ++ L+G IDF E N++ + T + L ++AF D
Sbjct: 269 KFEGDTLVNRIELKG-------IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD 321
Query: 398 KNSDQFITVNELETAFKENNMGDDAT---IKEIISEVGRD 434
K+ D IT +L T + ++G + T ++++I+EVG D
Sbjct: 322 KDGDGGITTKQLGTVMR--SLGQNPTEAELQDMINEVGAD 359
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 23/160 (14%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLSGQ---- 86
+LG+G FG + YA K K+++ E + I E+ + L+ Q
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIK------KIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 87 --------PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA-APVLRAIV 137
N V+ +A + ++ + + ME C+ G L+D I ++ +RD + R I+
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
A++ HS G++HRDLKP N FI N +K+ DFG A
Sbjct: 127 EALSYIHSQGIIHRDLKPMN-IFIDESRN--VKIGDFGLA 163
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
Y+ +G+G G Y + +T A + M ++PK + N++++ RE +
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 74
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
PNIV ++ + VVME GG L D ++ + E A V R + A+ H
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V+HRD+K +N + D + +K+TDFG
Sbjct: 134 SNQVIHRDIKSDNI-LLGMDGS--VKLTDFG 161
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
Y+ +G+G G Y + +T A + M ++PK + N++++ RE +
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 74
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
PNIV ++ + VVME GG L D ++ + E A V R + A+ H
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V+HRD+K +N + D + +K+TDFG
Sbjct: 134 SNQVIHRDIKSDNI-LLGMDGS--VKLTDFG 161
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D +G++S EL + +G +E +V LM D+DGN AI
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI 64
Query: 278 DYTEFTAATIQRQKLERSEY-LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
+++EF A ++ K SE L +AF+ FDK+ G ++ + + + H+ T
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDG------LISAAE----LKHVLTSIG 114
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+K + ML+++ DG+G I+ +F L++
Sbjct: 115 EKLTDAEVDE-----MLREVS-----DGSGEINIKQFAALLS 146
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 27/137 (19%)
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF FDKDNSG + S + T + GL ++ A L+ +
Sbjct: 15 EAFALFDKDNSGS-------------ISASELAT-VMRSLGLSPSEAEVA-----DLMNE 55
Query: 360 GDIDGNGNIDFIEFVNLMTDIYKLETP--ELLEKAFQYLDKNSDQFITVNELETAFKENN 417
D+DGN I+F EF+ LM+ K ELLE AF+ DKN D I+ EL+ +
Sbjct: 56 IDVDGNHAIEFSEFLALMSRQLKCNDSEQELLE-AFKVFDKNGDGLISAAELKHVL--TS 112
Query: 418 MGD---DATIKEIISEV 431
+G+ DA + E++ EV
Sbjct: 113 IGEKLTDAEVDEMLREV 129
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
+G G G+ + T S+ A K M K+ + + N+++I R+ Q N+V
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 134
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
E+ +++ + VVME +GG L D I+ +E A V A++ A++V H+ GV+H
Sbjct: 135 EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 193
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RD+K ++ + +K++DFG
Sbjct: 194 RDIKSDSILL---THDGRVKLSDFG 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
Y+ +G+G G Y + +T A + M ++PK + N++++ RE +
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 74
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
PNIV ++ + VVME GG L D ++ + E A V R + A+ H
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V+HRD+K +N + D + +K+TDFG
Sbjct: 134 SNQVIHRDIKSDNI-LLGMDGS--VKLTDFG 161
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 22/158 (13%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
LGRG FGV + + YA K + + P + A +M RE++ L P IV
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVM--REVKALAKLE-HPGIVRY 68
Query: 93 KSAHEDETA------------VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR---AIV 137
+A ++ +++ M+LC+ +L D + + ER+ + L I
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
AV HS G+MHRDLKP N F + DD ++KV DFG
Sbjct: 129 EAVEFLHSKGLMHRDLKPSNI-FFTMDD--VVKVGDFG 163
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
Y+ +G+G G Y + +T A + M ++PK + N++++ RE +
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 75
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
PNIV ++ + VVME GG L D ++ + E A V R + A+ H
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V+HRD+K +N + D + +K+TDFG
Sbjct: 135 SNQVIHRDIKSDNI-LLGMDGS--VKLTDFG 162
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 8/155 (5%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
ED +LH +MLG+G FG +L TN +A K++ KK + ++ E ++
Sbjct: 17 EDFILH----KMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMVEKRVL 71
Query: 81 RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L P + + + + + VME GGDL I + + A I+ +
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
HS G+++RDLK +N I D + +K+ DFG
Sbjct: 132 QFLHSKGIVYRDLKLDN---ILLDKDGHIKIADFG 163
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 10/157 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPN-I 89
+++GRG FG + + + +A K + K +K AE R E + L++G I
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAET-ACFREERDV--LVNGDSKWI 136
Query: 90 VELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMG 147
L A +D+ +++VM+ GGDL +++K E A L +V A++ H +
Sbjct: 137 TTLHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH 195
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
+HRD+KP+N I D N +++ DFGS L E+G
Sbjct: 196 YVHRDIKPDN---ILMDMNGHIRLADFGSCLKLMEDG 229
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 76/176 (43%), Gaps = 17/176 (9%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
Y G +LG G +L + + A K +A+ P + RRE Q
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 68
Query: 83 LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
L+ P IV + + E ET ++VME G L D + +G + + A V+
Sbjct: 69 LN-HPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
A+N H G++HRD+KP N + + +KV DFG A + G + +VI
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVI 180
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
R++GRG + L T+ YA K + KK + E+ ++ E + S P +V
Sbjct: 11 RVIGRGSYAKVLLVRLKKTDRIYAMK-VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 69
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
L S + E+ + V+E GGDL + + E A I A+N H G+++
Sbjct: 70 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 129
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
RDLK +N + D +K+TD+G +EG D TS
Sbjct: 130 RDLKLDN---VLLDSEGHIKLTDYGMC----KEGLRPGDTTS 164
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
+G G G+ + TE T A K M K+ + + N+++I R+ N+V
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH-------HDNVV 105
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
++ S++ + VVME +GG L D I+ +E A V +++ A++ H+ GV+H
Sbjct: 106 DMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIH 164
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RD+K ++ S + +K++DFG
Sbjct: 165 RDIKSDSILLTS---DGRIKLSDFG 186
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 74/162 (45%), Gaps = 8/162 (4%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
R++GRG + L T+ YA K + KK + E+ ++ E + S P +V
Sbjct: 15 RVIGRGSYAKVLLVRLKKTDRIYAMK-VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 73
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
L S + E+ + V+E GGDL + + E A I A+N H G+++
Sbjct: 74 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 133
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
RDLK +N + D +K+TD+G +EG D TS
Sbjct: 134 RDLKLDN---VLLDSEGHIKLTDYGMC----KEGLRPGDTTS 168
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
R++GRG + L T+ YA K + KK + E+ ++ E + S P +V
Sbjct: 26 RVIGRGSYAKVLLVRLKKTDRIYAMK-VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 84
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
L S + E+ + V+E GGDL + + E A I A+N H G+++
Sbjct: 85 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 144
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
RDLK +N D +K+TD+G +EG D TS
Sbjct: 145 RDLKLDNVLL---DSEGHIKLTDYGMC----KEGLRPGDTTS 179
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
+G G G+ + T S+ A K M K+ + + N+++I R+ Q N+V
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-------HENVV 211
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
E+ +++ + VVME +GG L D I+ +E A V A++ A++V H+ GV+H
Sbjct: 212 EMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RD+K ++ + +K++DFG
Sbjct: 271 RDIKSDSILLT---HDGRVKLSDFG 292
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
Y G +LG G +L + + A K +A+ P + RRE Q
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 85
Query: 83 LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
L+ P IV + E ET ++VME G L D + +G + + A V+
Sbjct: 86 LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 144
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
A+N H G++HRD+KP N + + +KV DFG A + G + +VI
Sbjct: 145 ALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVI 197
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D NG++S EL + +G +E +V LM D+DGN I
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 278 DYTEFTAATIQRQKLERSEY-LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
+++EF A ++ K SE L +AF+ FDK+ G ++ + + + H+ T
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDG------LISAAE----LKHVLTSIG 114
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+K +ML+++ DG+G I+ +F L++
Sbjct: 115 EKLTDAEVD-----DMLREVS-----DGSGEINIQQFAALLS 146
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 27/137 (19%)
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF FDKDN+G + S + + GL ++ + L+ +
Sbjct: 15 EAFALFDKDNNGS------ISSSE--------LATVMRSLGLSPSEA-----EVNDLMNE 55
Query: 360 GDIDGNGNIDFIEFVNLMTDIYKLETPE--LLEKAFQYLDKNSDQFITVNELETAFKENN 417
D+DGN I+F EF+ LM+ K E LLE AF+ DKN D I+ EL+ +
Sbjct: 56 IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLE-AFKVFDKNGDGLISAAELKHVL--TS 112
Query: 418 MGD---DATIKEIISEV 431
+G+ DA + +++ EV
Sbjct: 113 IGEKLTDAEVDDMLREV 129
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIR 74
GK E + Y G +LG G G Y S N+P A K + K + E N +
Sbjct: 43 GKEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 102
Query: 75 REI-QIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG-GDLFDRIIAKGYYSERDAAPV 132
E+ ++++ SG ++ L E + +++E + DLFD I +G E A
Sbjct: 103 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSF 162
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSALLFEE 182
++ AV CH+ GV+HRD+K EN ++R + LK+ DFGS L ++
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE---LKLIDFGSGALLKD 210
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
Y G +LG G +L + + A K +A+ P + RRE Q
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 68
Query: 83 LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
L+ P IV + E ET ++VME G L D + +G + + A V+
Sbjct: 69 LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
A+N H G++HRD+KP N + + +KV DFG A + G + +VI
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVI 180
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 17/176 (9%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
Y G +LG G +L + + A K +A+ P + RRE Q
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 68
Query: 83 LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
L+ P IV + E ET ++VME G L D + +G + + A V+
Sbjct: 69 LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
A+N H G++HRD+KP N + + +KV DFG A + G +VI
Sbjct: 128 ALNFSHQNGIIHRDVKPANILISATN---AVKVVDFGIARAIADSGNSVXQTAAVI 180
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
Y G +LG G +L + + A K +A+ P + RRE Q
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 68
Query: 83 LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
L+ P IV + E ET ++VME G L D + +G + + A V+
Sbjct: 69 LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
A+N H G++HRD+KP N + + +KV DFG A + G + +VI
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVI 180
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 75/176 (42%), Gaps = 17/176 (9%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRRL 82
Y G +LG G +L + + A K +A+ P + RRE Q
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFY-----LRFRREAQNAAA 68
Query: 83 LSGQPNIVELKSAHEDETAV----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
L+ P IV + E ET ++VME G L D + +G + + A V+
Sbjct: 69 LN-HPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQ 127
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
A+N H G++HRD+KP N + + +KV DFG A + G + +VI
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVI 180
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLS 84
++F +LG+G FG L T YA K + K ++ E M+ +R + LL
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKR---VLALLD 77
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P + +L S + ++ VME GGDL I G + E A I + H
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLH 137
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
G+++RDLK +N + D +K+ DFG
Sbjct: 138 KRGIIYRDLKLDN---VMLDSEGHIKIADFG 165
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 8/164 (4%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
R++GRG + L T+ YA + + KK + E+ ++ E + S P +V
Sbjct: 58 RVIGRGSYAKVLLVRLKKTDRIYAMR-VVKKELVNDDEDIDWVQTEKHVFEQASNHPFLV 116
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
L S + E+ + V+E GGDL + + E A I A+N H G+++
Sbjct: 117 GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIY 176
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVI 194
RDLK +N D +K+TD+G +EG D TS
Sbjct: 177 RDLKLDNVLL---DSEGHIKLTDYGMC----KEGLRPGDTTSTF 213
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D NG++S EL + +G +E +V LM D+DGN I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 278 DYTEFTAATIQRQKLERSEY-LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
+++EF A ++ K SE L +AF+ FDK+ G ++ + + + H+ T
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDG------LISAAE----LKHVLTSIG 113
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+K +ML+++ DG+G I+ +F L++
Sbjct: 114 EKLTDAEVD-----DMLREVS-----DGSGEINIQQFAALLS 145
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 27/137 (19%)
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF FDKDN+G +I + S + T + GL ++ + L+ +
Sbjct: 14 EAFALFDKDNNG------------SISS-SELAT-VMRSLGLSPSEA-----EVNDLMNE 54
Query: 360 GDIDGNGNIDFIEFVNLMTDIYKLETPE--LLEKAFQYLDKNSDQFITVNELETAFKENN 417
D+DGN I+F EF+ LM+ K E LLE AF+ DKN D I+ EL+ +
Sbjct: 55 IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLE-AFKVFDKNGDGLISAAELKHVL--TS 111
Query: 418 MGD---DATIKEIISEV 431
+G+ DA + +++ EV
Sbjct: 112 IGEKLTDAEVDDMLREV 128
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIR 80
ED LH +MLG+G FG +L TN +A K++ KK + ++ E ++
Sbjct: 18 EDFELH----KMLGKGSFGKVFLAEFKKTNQFFAIKAL-KKDVVLMDDDVECTMVEKRVL 72
Query: 81 RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L P + + + + + VME GGDL I + + A I+ +
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
HS G+++RDLK +N I D + +K+ DFG
Sbjct: 133 QFLHSKGIVYRDLKLDN---ILLDKDGHIKIADFG 164
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLS 84
Y+ +G+G G Y + +T A + M ++PK + N++++ RE +
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE-------N 75
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
PNIV ++ + VVME GG L D ++ + E A V R + A+ H
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S V+HR++K +N + D + +K+TDFG
Sbjct: 135 SNQVIHRNIKSDNI-LLGMDGS--VKLTDFG 162
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 75/145 (51%), Gaps = 13/145 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSM--AKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
+G G G+ L E + A K M K+ + + N+++I R+ Q N+V
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-------HFNVV 105
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
E+ ++ + V+ME QGG L D I+++ +E A V A++ A+ H+ GV+H
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIH 164
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RD+K ++ ++ D +K++DFG
Sbjct: 165 RDIKSDSI-LLTLDGR--VKLSDFG 186
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D NG++S EL + +G +E +V LM D+DGN I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 278 DYTEFTAATIQRQKLERSEY-LSKAFQYFDKDNSG 311
+++EF A ++ K SE L +AF+ FDK+ G
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDG 98
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 22/112 (19%)
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF FDKDN+G +I + S + T + GL ++ + L+ +
Sbjct: 14 EAFALFDKDNNG------------SISS-SELAT-VMRSLGLSPSEA-----EVNDLMNE 54
Query: 360 GDIDGNGNIDFIEFVNLMTDIYKLETP--ELLEKAFQYLDKNSDQFITVNEL 409
D+DGN I+F EF+ LM+ K ELLE AF+ DKN D I+ EL
Sbjct: 55 IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLE-AFKVFDKNGDGLISAAEL 105
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
LG+G F + ++ T +A K + K +K + + M EI I R L+ Q ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 79
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
ED V VV+ELC+ L + + +E +A LR IV H V+HR
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
DLK N F++ D +K+ DFG A E +G
Sbjct: 140 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 169
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
LG+G F + ++ T +A K + K +K + + M EI I R L+ Q ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 81
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
ED V VV+ELC+ L + + +E +A LR IV H V+HR
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
DLK N F++ D +K+ DFG A E +G
Sbjct: 142 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 171
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
LG+G F + ++ T +A K + K +K + + M EI I R L+ Q ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 103
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
ED V VV+ELC+ L + + +E +A LR IV H V+HR
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
DLK N F++ D +K+ DFG A E +G
Sbjct: 164 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 193
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
LG+G F + ++ T +A K + K +K + + M EI I R L+ Q ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 81
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
ED V VV+ELC+ L + + +E +A LR IV H V+HR
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
DLK N F++ D +K+ DFG A E +G
Sbjct: 142 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 171
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
LG+G F + ++ T +A K + K +K + + M EI I R L+ Q ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 105
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
ED V VV+ELC+ L + + +E +A LR IV H V+HR
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
DLK N F++ D +K+ DFG A E +G
Sbjct: 166 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 195
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA-APVLRAIVNAVNVCHSM 146
N V+ +A + ++ + + ME C+ L+D I ++ +RD + R I+ A++ HS
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ 135
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
G++HRDLKP N FI N +K+ DFG A
Sbjct: 136 GIIHRDLKPMN-IFIDESRN--VKIGDFGLA 163
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 28/166 (16%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ K+ F++ D + G ++ EL + +G TE +++ L+ A+ + NG +
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQL 63
Query: 278 DYTEFTAATI-QRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR----NVSHIY 332
++TEF Q ++ + E + +AF+ FD+D G+ SP +R N+
Sbjct: 64 NFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFI-------SPAELRFVMINLGEKV 116
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
TD+ + +++ + D DG+G I++ EFV +++
Sbjct: 117 TDEE----------------IDEMIREADFDGDGMINYEEFVWMIS 146
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMT-DIYKLETPELLEKAFQYLDKNSDQFITVNELET 411
L+ L+ + + + NG ++F EF +M + + +T E + +AF+ D++ D FI+ EL
Sbjct: 48 LQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELR- 106
Query: 412 AFKENNMGDDATIKEI 427
F N+G+ T +EI
Sbjct: 107 -FVMINLGEKVTDEEI 121
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYAC-KSMAKKPKMKYAENDMMIRREIQI 79
ED L + R+LGRG FG + C +T YAC K K+ K + M+ ++I
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 80 RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-----AKGYYSERDAAPVLR 134
+ IV L A E +T + +VM + GGD+ I G+ R A
Sbjct: 241 K---VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTA 296
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
IV+ + H +++RDLKPEN + DD+ ++++D G A+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAV 337
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 16/164 (9%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYAC-KSMAKKPKMKYAENDMMIRREIQI 79
ED L + R+LGRG FG + C +T YAC K K+ K + M+ ++I
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 80 RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-----AKGYYSERDAAPVLR 134
+ IV L A E +T + +VM + GGD+ I G+ R A
Sbjct: 241 K---VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR-AIFYTA 296
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
IV+ + H +++RDLKPEN + DD+ ++++D G A+
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAV 337
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYAC-KSMAKKPKMKYAENDMMIRREIQI 79
ED L + R+LGRG FG + C +T YAC K K+ K + M+ ++I
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 80 RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRA 135
+ IV L A E +T + +VM + GGD+ I + E A
Sbjct: 241 K---VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
IV+ + H +++RDLKPEN + DD+ ++++D G A+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAV 337
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
LG+G F + ++ T +A K + K +K + + M EI I R L+ Q ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKM-SMEISIHRSLAHQ-HVVG 85
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHR 151
ED V VV+ELC+ L + + +E +A LR IV H V+HR
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 152 DLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
DLK N F++ D +K+ DFG A E +G
Sbjct: 146 DLKLGNL-FLNEDLE--VKIGDFGLATKVEYDG 175
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 64 MKYAENDMMIRREIQIRRLLSGQPNIVEL--KSAHEDETAVHVVMELCQGGDLFDRIIAK 121
M AE M++ E+ + R L PNIV + T +++VME C+GGDL +I K
Sbjct: 44 MTEAEKQMLVS-EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITK 100
Query: 122 G-----YYSERDAAPVLRAIVNAVNVCHSMG-----VMHRDLKPENFCFISRDDNALLKV 171
G Y E V+ + A+ CH V+HRDLKP N F+ N +K+
Sbjct: 101 GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKL 157
Query: 172 TDFGSALLFEEEG--GEASDDTSVILRMKQFRRMS 204
DFG A + + +A T + +Q RMS
Sbjct: 158 GDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMS 192
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 14/163 (8%)
Query: 21 EDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYAC-KSMAKKPKMKYAENDMMIRREIQI 79
ED L + R+LGRG FG + C +T YAC K K+ K + M+ ++I
Sbjct: 184 EDWFLDF---RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA 240
Query: 80 RRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA----KGYYSERDAAPVLRA 135
+ IV L A E +T + +VM + GGD+ I + E A
Sbjct: 241 K---VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSAL 178
IV+ + H +++RDLKPEN + DD+ ++++D G A+
Sbjct: 298 IVSGLEHLHQRNIIYRDLKPEN---VLLDDDGNVRISDLGLAV 337
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 64 MKYAENDMMIRREIQIRRLLSGQPNIVEL--KSAHEDETAVHVVMELCQGGDLFDRIIAK 121
M AE M++ E+ + R L PNIV + T +++VME C+GGDL +I K
Sbjct: 44 MTEAEKQMLVS-EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITK 100
Query: 122 G-----YYSERDAAPVLRAIVNAVNVCHSMG-----VMHRDLKPENFCFISRDDNALLKV 171
G Y E V+ + A+ CH V+HRDLKP N F+ N +K+
Sbjct: 101 GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKL 157
Query: 172 TDFGSALLFEEEGGEASD--DTSVILRMKQFRRMS 204
DFG A + + A T + +Q RMS
Sbjct: 158 GDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMS 192
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
YL E K F D D G +S EL + +G T+ ++ ++E D DG+G
Sbjct: 10 YLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGT 69
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
ID+ EF +++ K + E L++ F+ FD++ GY + + E R
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAE---IFRASGEHV 126
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
TD+ ++ L+ GD + +G IDF EF+ +M
Sbjct: 127 TDEE----------------IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 209 LTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA 268
+ V+ + E G+ + L E F D + +G + +EL G +T+ +++ LM+
Sbjct: 78 MMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKD 137
Query: 269 ADMDGNGAIDYTEF 282
D + +G ID+ EF
Sbjct: 138 GDKNNDGRIDFDEF 151
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLS 84
++F +LG+G FG L T+ YA K + K ++ E M+ +R + L
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR---VLALPG 78
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P + +L S + ++ VME GGDL I G + E A I +
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 138
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S G+++RDLK +N + D +K+ DFG
Sbjct: 139 SKGIIYRDLKLDN---VMLDSEGHIKIADFG 166
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G FG + C + YA K +KKP + + ++ RE+ +L ++V
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKP-LAGSVDEQNALREVYAHAVLGQHSHVVRY 72
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGV 148
SA ++ + + E C GG L D I Y+ E + +L + + HSM +
Sbjct: 73 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 132
Query: 149 MHRDLKPENFCFISR 163
+H D+KP N FISR
Sbjct: 133 VHMDIKPSNI-FISR 146
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 64 MKYAENDMMIRREIQIRRLLSGQPNIVEL--KSAHEDETAVHVVMELCQGGDLFDRIIAK 121
M AE M++ E+ + R L PNIV + T +++VME C+GGDL +I K
Sbjct: 44 MTEAEKQMLVS-EVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITK 100
Query: 122 G-----YYSERDAAPVLRAIVNAVNVCHSMG-----VMHRDLKPENFCFISRDDNALLKV 171
G Y E V+ + A+ CH V+HRDLKP N F+ N +K+
Sbjct: 101 GTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKL 157
Query: 172 TDFGSALLFEEEGGEASD--DTSVILRMKQFRRMS 204
DFG A + + A + T + +Q RMS
Sbjct: 158 GDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMS 192
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G FG + C + YA K +KKP + + ++ RE+ +L ++V
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKP-LAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGV 148
SA ++ + + E C GG L D I Y+ E + +L + + HSM +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 149 MHRDLKPENFCFISR 163
+H D+KP N FISR
Sbjct: 135 VHMDIKPSNI-FISR 148
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
++ F R+LG+G FG L T YA K + K ++ + + + E +I L
Sbjct: 24 NFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMT-EKRILSLARN 82
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
P + +L + + VME GGDL I + E A I++A+ H
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
G+++RDLK +N + D K+ DFG
Sbjct: 143 KGIIYRDLKLDN---VLLDHEGHCKLADFG 169
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G FG + C + YA K +KKP + + ++ RE+ +L ++V
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKP-LAGSVDEQNALREVYAHAVLGQHSHVVRY 76
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGV 148
SA ++ + + E C GG L D I Y+ E + +L + + HSM +
Sbjct: 77 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 136
Query: 149 MHRDLKPENFCFISR 163
+H D+KP N FISR
Sbjct: 137 VHMDIKPSNI-FISR 150
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G FG + C + YA K +KKP + + ++ RE+ +L ++V
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKP-LAGSVDEQNALREVYAHAVLGQHSHVVRY 74
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAK----GYYSERDAAPVLRAIVNAVNVCHSMGV 148
SA ++ + + E C GG L D I Y+ E + +L + + HSM +
Sbjct: 75 FSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSL 134
Query: 149 MHRDLKPENFCFISR 163
+H D+KP N FISR
Sbjct: 135 VHMDIKPSNI-FISR 148
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
++GRG FGV +C + K +A K +E I Q+ R+ PNIV+
Sbjct: 16 VVGRGAFGV--VCKAK-----WRAKDVAIKQIESESERKAFIVELRQLSRV--NHPNIVK 66
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAK---GYYSERDAAPVLRAIVNAVNVCHSM-- 146
L A + V +VME +GG L++ + YY+ A V HSM
Sbjct: 67 LYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 147 -GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLKP N ++ +LK+ DFG+A
Sbjct: 125 KALIHRDLKPPNLLLVA--GGTVLKICDFGTA 154
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 19/152 (12%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
++GRG FGV +C + K +A K +E I Q+ R+ PNIV+
Sbjct: 15 VVGRGAFGV--VCKAK-----WRAKDVAIKQIESESERKAFIVELRQLSRV--NHPNIVK 65
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAK---GYYSERDAAPVLRAIVNAVNVCHSM-- 146
L A + V +VME +GG L++ + YY+ A V HSM
Sbjct: 66 LYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 147 -GVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLKP N ++ +LK+ DFG+A
Sbjct: 124 KALIHRDLKPPNLLLVA--GGTVLKICDFGTA 153
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
++ + + LKE F D D+NG +S ELR + +G LT+ +V+Q+++ AD+DG+G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 277 IDYTEFT 283
++Y EF
Sbjct: 62 VNYEEFV 68
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 19/85 (22%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E L +AF+ FDKD +GY + E + N+ TD+ +++
Sbjct: 9 EELKEAFKVFDKDQNGY---ISASELRHVMINLGEKLTDEE----------------VEQ 49
Query: 356 LVLQGDIDGNGNIDFIEFVNLMTDI 380
++ + D+DG+G +++ EFV +M +
Sbjct: 50 MIKEADLDGDGQVNYEEFVKMMMTV 74
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 7/115 (6%)
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVH--VVMELCQGGDLFDRI--IAKGY-YSERDA 129
RE ++ + L+ NIV+L + E+ T H ++ME C G L+ + + Y E +
Sbjct: 56 REFEVLKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFC-FISRDDNALLKVTDFGSALLFEEE 183
VLR +V +N G++HR++KP N I D ++ K+TDFG+A E++
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 7/115 (6%)
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVH--VVMELCQGGDLFDRI--IAKGY-YSERDA 129
RE ++ + L+ + NIV+L + E+ T H ++ME C G L+ + + Y E +
Sbjct: 56 REFEVLKKLNHK-NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEF 114
Query: 130 APVLRAIVNAVNVCHSMGVMHRDLKPENFC-FISRDDNALLKVTDFGSALLFEEE 183
VLR +V +N G++HR++KP N I D ++ K+TDFG+A E++
Sbjct: 115 LIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD 169
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
YL E K F D D G +S EL + +G T+ ++ ++E D DG+G
Sbjct: 10 YLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGT 69
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
ID+ EF +++ K + E L++ F+ FD++ GY + + E R
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAE---IFRASGEHV 126
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
TD+ ++ L+ GD + +G IDF EF+ +M
Sbjct: 127 TDEE----------------IESLMKDGDKNNDGRIDFDEFLKMM 155
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 209 LTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA 268
+ V+ + E G+ + L E F D + +G + +EL G +T+ +++ LM+
Sbjct: 78 MMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKD 137
Query: 269 ADMDGNGAIDYTEF 282
D + +G ID+ EF
Sbjct: 138 GDKNNDGRIDFDEF 151
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+ LKE F D D+NG +S ELR + +G LT+ +V+Q+++ AD+DG+G ++Y EF
Sbjct: 4 EELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 19/85 (22%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E L +AF+ FDKD +GY + E + N+ TD+ +++
Sbjct: 4 EELKEAFKVFDKDQNGY---ISASELRHVMINLGEKLTDEE----------------VEQ 44
Query: 356 LVLQGDIDGNGNIDFIEFVNLMTDI 380
++ + D+DG+G +++ EFV +M +
Sbjct: 45 MIKEADLDGDGQVNYEEFVKMMMTV 69
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 71
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 83
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 84 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 141
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 182
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 71
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 33 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 84
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 85 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 142
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 183
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 39 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 90
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 91 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 148
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 189
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 28 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 79
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 80 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 137
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 178
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 71
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 24 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 75
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 76 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 133
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 174
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 71
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 15/163 (9%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQP 87
++G G +G+ C T A K + +++D M++ REI++ + L +
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLE------SDDDKMVKKIAMREIKLLKQLRHE- 84
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
N+V L + + ++V E L D + + L I+N + CHS
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN 144
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDD 190
++HRD+KPEN I + ++K+ DFG A GE DD
Sbjct: 145 IIHRDIKPEN---ILVSQSGVVKLCDFGFARTLAAP-GEVYDD 183
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 21 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 72
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 73 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 130
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 171
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 25 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 76
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 77 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 134
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 135 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 175
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 48 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 99
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 100 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 157
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 158 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 198
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 32 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 83
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 84 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 141
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 182
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 105
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 106 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 163
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 204
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 105
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 106 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 163
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 204
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 31/174 (17%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD----VKQLMEAADMD 272
+ +E + L ++F ++D D +G+LS +E + L E V+++++ D D
Sbjct: 13 HFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTD 64
Query: 273 GNGAIDYTEFTAATIQ-RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI 331
GNG +D+ EF Q K ++ + L AF+ +D D GY +S+
Sbjct: 65 GNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGY---------------ISNG 109
Query: 332 YTDKAKKFGLGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--TDIYK 382
+ K +GN K + ++ K ++ D DG+G I F EF ++ DI+K
Sbjct: 110 ELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 163
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 8/151 (5%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY--AENDMMIRREIQIRRLLS 84
++F +LG+G FG L T+ YA K + K ++ E M+ +R + L
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR---VLALPG 399
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
P + +L S + ++ VME GGDL I G + E A I +
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ 459
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S G+++RDLK +N + D +K+ DFG
Sbjct: 460 SKGIIYRDLKLDN---VMLDSEGHIKIADFG 487
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
R +G G FG Y + + A K M+ K + E I +E++ + L PN +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLR-HPNTI 117
Query: 91 ELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+ + + E +VME C G DL + + K E + A V + + HS +
Sbjct: 118 QYRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
+HRD+K N + L+K+ DFGSA
Sbjct: 176 IHRDVKAGNILL---SEPGLVKLGDFGSA 201
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 82/174 (47%), Gaps = 31/174 (17%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD----VKQLMEAADMD 272
+ +E + L ++F ++D D +G+LS +E + L E V+++++ D D
Sbjct: 14 HFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTD 65
Query: 273 GNGAIDYTEFTAATIQ-RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHI 331
GNG +D+ EF Q K ++ + L AF+ +D D GY +S+
Sbjct: 66 GNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGY---------------ISNG 110
Query: 332 YTDKAKKFGLGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--TDIYK 382
+ K +GN K + ++ K ++ D DG+G I F EF ++ DI+K
Sbjct: 111 ELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 164
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 56 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 107
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 108 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 165
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 166 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 206
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 67/149 (44%), Gaps = 9/149 (6%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
R +G G FG Y + + A K M+ K + E I +E++ + L PN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDIIKEVRFLQKLR-HPNTI 78
Query: 91 ELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGV 148
+ + + E +VME C G DL + + K E + A V + + HS +
Sbjct: 79 QYRGCYLREHTAWLVMEYCLGSASDLLE--VHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
+HRD+K N + L+K+ DFGSA
Sbjct: 137 IHRDVKAGNILL---SEPGLVKLGDFGSA 162
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 99 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 150
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 151 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 208
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 249
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+ LKE F D D+NG +S ELR +T +G LT+ +V +++ AD+DG+G I+Y EF
Sbjct: 4 EELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
Query: 284 AATIQR 289
+ +
Sbjct: 64 KVMMAK 69
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 19/82 (23%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E L +AF+ FDKD +G F + E + N+ TD+ + +
Sbjct: 4 EELKEAFRVFDKDQNG---FISAAELRHVMTNLGEKLTDEE----------------VDE 44
Query: 356 LVLQGDIDGNGNIDFIEFVNLM 377
++ + D+DG+G I++ EFV +M
Sbjct: 45 MIREADVDGDGQINYEEFVKVM 66
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y + A K + + + K RE+QI R L
Sbjct: 58 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFK--------NRELQIMRKLD 109
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 110 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 167
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 168 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 208
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 23/160 (14%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-MIRREIQIRRLLSGQ---- 86
+LG+G FG + YA K K+++ E + I E+ + L+ Q
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIK------KIRHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 87 --------PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA-APVLRAIV 137
N V+ +A + ++ + + E C+ L+D I ++ +RD + R I+
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
A++ HS G++HR+LKP N FI D++ +K+ DFG A
Sbjct: 127 EALSYIHSQGIIHRNLKPXN-IFI--DESRNVKIGDFGLA 163
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y C S K + RE+QI R L
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAK--------LCDSGELVAIKKVLQGKAFKNRELQIMRKLD 71
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L EE + L+E F E D DK+G ++ +L + +G M TE ++ +L + +M+ G +
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 78
Query: 278 DYTEFTAATIQRQKLERSEY-----LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
D+ +F + E ++ L AF+ FD + G +S
Sbjct: 79 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDG---------------EISTSE 123
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+A + LG+ R +++++ D++G+G +DF EFV +M+
Sbjct: 124 LREAMRKLLGHQVGHRD---IEEIIRDVDLNGDGRVDFEEFVRMMS 166
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 26/146 (17%)
Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
E E L +AF+ FDKD GY R + +R + ++ T+
Sbjct: 22 EEIEELREAFREFDKDKDGYINCRDL---GNCMRTMGYMPTEME---------------- 62
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPEL-----LEKAFQYLDKNSDQFITVN 407
L +L Q +++ G++DF +FV LM ET ++ L AF+ D N D I+ +
Sbjct: 63 LIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTS 122
Query: 408 ELETAFKE--NNMGDDATIKEIISEV 431
EL A ++ + I+EII +V
Sbjct: 123 ELREAMRKLLGHQVGHRDIEEIIRDV 148
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L EE + L+E F E D DK+G ++ +L + +G M TE ++ +L + +M+ G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 278 DYTEFTAATIQRQKLERSEY-----LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
D+ +F + E ++ L AF+ FD + G +S
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDG---------------EISTSE 109
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+A + LG+ R +++++ D++G+G +DF EFV +M+
Sbjct: 110 LREAMRALLGHQVGHRD---IEEIIRDVDLNGDGRVDFEEFVRMMS 152
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 24/127 (18%)
Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
E E L +AF+ FDKD GY R + +R + ++ T+
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDL---GNCMRTMGYMPTEME---------------- 48
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPEL-----LEKAFQYLDKNSDQFITVN 407
L +L Q +++ G++DF +FV LM ET ++ L AF+ D N D I+ +
Sbjct: 49 LIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTS 108
Query: 408 ELETAFK 414
EL A +
Sbjct: 109 ELREAMR 115
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 22/163 (13%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y C S K + RE+QI R L
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAK--------LCDSGELVAIKKVLQGKAFKNRELQIMRKLD 71
Query: 85 GQPNIVELK----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----- 135
NIV L+ S+ E + V++ + L + R+ A+ Y + PV+
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMY 129
Query: 136 -IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 31/173 (17%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD----VKQLMEAADMDG 273
+ +E + L ++F ++D D +G+LS +E + L E V+++++ D DG
Sbjct: 1 MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTDG 52
Query: 274 NGAIDYTEFTAATIQ-RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
NG +D+ EF Q K ++ + L AF+ +D D GY +S+
Sbjct: 53 NGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGY---------------ISNGE 97
Query: 333 TDKAKKFGLGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--TDIYK 382
+ K +GN K + ++ K ++ D DG+G I F EF ++ DI+K
Sbjct: 98 LFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 150
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 28/164 (17%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
E+ Q + E F D + +G L Y EL+ + +G L + ++ L++ D +G + Y
Sbjct: 20 EQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYD 79
Query: 281 EFTAA----TIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
+F ++R L+ + +AFQ FD D++G +I+N+ + A
Sbjct: 80 DFYIVMGEKILKRDPLDE---IKRAFQLFDDDHTG----------KISIKNLRRV----A 122
Query: 337 KKFGLGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD 379
K+ G T ++ RAM + + D+DG+G I+ EF+ + TD
Sbjct: 123 KELGETLTDEELRAM------IEEFDLDGDGEINENEFIAICTD 160
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 23/166 (13%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L EE + L+E F E D DK+G ++ +L + +G M TE ++ +L + +M+ G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 278 DYTEFTAATIQRQKLERSEY-----LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
D+ +F + E ++ L AF+ FD + G +S
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDG---------------EISTSE 109
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
+A + LG+ R +++++ D++G+G +DF EFV +M+
Sbjct: 110 LREAMRKLLGHQVGHRD---IEEIIRDVDLNGDGRVDFEEFVRMMS 152
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 28/147 (19%)
Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
E E L +AF+ FDKD GY R + +R + ++ T+
Sbjct: 8 EEIEELREAFREFDKDKDGYINCRDL---GNCMRTMGYMPTEME---------------- 48
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPEL-----LEKAFQYLDKNSDQFITVN 407
L +L Q +++ G++DF +FV LM ET ++ L AF+ D N D I+ +
Sbjct: 49 LIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTS 108
Query: 408 ELETAFKE---NNMGDDATIKEIISEV 431
EL A ++ + +G I+EII +V
Sbjct: 109 ELREAMRKLLGHQVG-HRDIEEIIRDV 134
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 81/170 (47%), Gaps = 31/170 (18%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFD----VKQLMEAADMDGNGA 276
+E + L ++F ++D D +G+LS +E + L E V+++++ D DGNG
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMS--------LPELQQNPLVQRVIDIFDTDGNGE 54
Query: 277 IDYTEFTAATIQ-RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDK 335
+D+ EF Q K ++ + L AF+ +D D GY +S+ +
Sbjct: 55 VDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGY---------------ISNGELFQ 99
Query: 336 AKKFGLGNT-KQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM--TDIYK 382
K +GN K + ++ K ++ D DG+G I F EF ++ DI+K
Sbjct: 100 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHK 149
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT-KVGSMLTEFDVKQLMEA----ADMD 272
+ G++ Q L+ F D DK+G +S EL L VG+ L + ++Q+++ AD D
Sbjct: 69 VKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKD 128
Query: 273 GNGAIDYTEFTAAT 286
G+G I + EF A
Sbjct: 129 GDGRISFEEFCAVV 142
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 44/188 (23%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRL--- 82
YS G+ LG G FG+ + + +A K + + P+ K E D+M + + I +L
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDY 68
Query: 83 --------------------LSGQPNIVELKSAHEDETAVH--------VVMELCQGGDL 114
L G+ N V + H V+ V+ME D
Sbjct: 69 FYTTGDEEPKPPQPPDDHNKLGGKNNGV---NNHHKSVIVNPSQNKYLNVIMEYVP--DT 123
Query: 115 FDRIIAKGYYSERDAAPVLRAI-----VNAVNVCHSMGVMHRDLKPENFCFISRDDNALL 169
+++ S R L +I AV HS+G+ HRD+KP+N S+D+ L
Sbjct: 124 LHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT--L 181
Query: 170 KVTDFGSA 177
K+ DFGSA
Sbjct: 182 KLCDFGSA 189
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 20/158 (12%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
E+ Q ++E F D D GT+ EL+ + +G + ++K+++ D +G G +++
Sbjct: 3 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 62
Query: 281 EF-TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKF 339
+F T T + + + E + KAF+ FD D +G F +N+ + AK+
Sbjct: 63 DFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISF----------KNLKRV----AKEL 108
Query: 340 GLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
G T + L++++ + D DG+G + EF+ +M
Sbjct: 109 GENLTDE-----ELQEMIDEADRDGDGEVSEQEFLRIM 141
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTD-IYKLETPELLEKAFQYLDKNSDQFITVNELET 411
+KK++ + D +G G ++F +F+ +MT + + +T E + KAF+ D + I+ L+
Sbjct: 44 IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKR 103
Query: 412 AFKE--NNMGDDATIKEIISEVGRD 434
KE N+ D+ ++E+I E RD
Sbjct: 104 VAKELGENLTDEE-LQEMIDEADRD 127
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 27/173 (15%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
GK E + Y+ +++G G FGV + ++ A K + + + K RE
Sbjct: 32 GKTGEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFK--------NRE 82
Query: 77 IQIRRLLSGQPNIVELKSA------HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAA 130
+QI R++ PN+V+LK+ +DE +++V+E + R ++ Y +
Sbjct: 83 LQIMRIVK-HPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYRA-SRHYAKLKQTM 138
Query: 131 PVL------RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
P+L ++ ++ HS+G+ HRD+KP+N + +LK+ DFGSA
Sbjct: 139 PMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSA 189
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
LG G FG Y T++ A K + K + + D M+ +I PNIV+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILAS---CDHPNIVKL 99
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
A E + +++E C GG + D ++ + +E V + ++A+N H ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RDLK N F D +K+ DFG
Sbjct: 159 RDLKAGNILFTLDGD---IKLADFG 180
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
LG G FG Y T++ A K + K + + D M+ +I PNIV+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILAS---CDHPNIVKL 99
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
A E + +++E C GG + D ++ + +E V + ++A+N H ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RDLK N F D +K+ DFG
Sbjct: 159 RDLKAGNILFTLDGD---IKLADFG 180
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
LG G FG Y T++ A K + K + + D M+ +I PNIV+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILAS---CDHPNIVKL 99
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
A E + +++E C GG + D ++ + +E V + ++A+N H ++H
Sbjct: 100 LDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 158
Query: 151 RDLKPENFCFISRDDNALLKVTDFG 175
RDLK N F D +K+ DFG
Sbjct: 159 RDLKAGNILFTLDGD---IKLADFG 180
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 25 LHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
+ Y+ +++G G FGV Y C S K + RE+QI R L
Sbjct: 20 VSYTDTKVIGNGSFGVVYQAK--------LCDSGELVAIKKVLQGKAFKNRELQIMRKLD 71
Query: 85 GQPNIVELK------SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--- 135
NIV L+ +DE +++V++ +A+ Y + PV+
Sbjct: 72 -HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYR---VARHYSRAKQTLPVIYVKLY 127
Query: 136 ---IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ ++ HS G+ HRD+KP+N + D A+LK+ DFGSA
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSA 170
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 37/163 (22%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
+G G +GV Y +N+ +A K K++ + D I REI I + L N
Sbjct: 10 IGEGTYGVVY-KAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKELK-HSN 61
Query: 89 IVELKSA-HEDETAVHV----------VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
IV+L H + V V ++++C+GG + + AK + L ++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLL 110
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
N + CH V+HRDLKP+N I+R+ LK+ DFG A F
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNL-LINREGE--LKIADFGLARAF 150
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 37/163 (22%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
+G G +GV Y +N+ +A K K++ + D I REI I + L N
Sbjct: 10 IGEGTYGVVY-KAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKELK-HSN 61
Query: 89 IVELKSA-HEDETAVHV----------VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
IV+L H + V V ++++C+GG + + AK + L ++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLL 110
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
N + CH V+HRDLKP+N I+R+ LK+ DFG A F
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNL-LINREGE--LKIADFGLARAF 150
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 37/163 (22%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR----REIQIRRLLSGQPN 88
+G G +GV Y +N+ +A K K++ + D I REI I + L N
Sbjct: 10 IGEGTYGVVY-KAQNNYGETFALK------KIRLEKEDEGIPSTTIREISILKELK-HSN 61
Query: 89 IVELKSA-HEDETAVHV----------VMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
IV+L H + V V ++++C+GG + + AK + L ++
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKSF---------LLQLL 110
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
N + CH V+HRDLKP+N I+R+ LK+ DFG A F
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNL-LINREGE--LKIADFGLARAF 150
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 22/135 (16%)
Query: 46 ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL--LSGQPNIVELKSAHEDETAVH 103
+ ST+ P + S P +K IRR+ S + + +L+ + + ++
Sbjct: 92 DESTDWPLSSPSPMDAPSVK-------------IRRMDPFSTKNTVGQLQPS-SPKVYLY 137
Query: 104 VVMELCQGGDLFDRIIAKGYYSERDAAPVLR---AIVNAVNVCHSMGVMHRDLKPENFCF 160
+ M+LC+ +L D + + +R+ L I AV HS G+MHRDLKP N F
Sbjct: 138 IQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNI-F 196
Query: 161 ISRDDNALLKVTDFG 175
+ DD ++KV DFG
Sbjct: 197 FTMDD--VVKVGDFG 209
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 19/182 (10%)
Query: 8 SQRQRYPILGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA 67
S R + +G+ E L R+L G F Y + + YA K + +
Sbjct: 11 SGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE---- 66
Query: 68 ENDMMIRREIQIRRLLSGQPNIVELKSA-----HEDETA---VHVVMELCQGG--DLFDR 117
E + I +E+ + LSG PNIV+ SA E +T ++ ELC+G + +
Sbjct: 67 EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKK 126
Query: 118 IIAKGYYSERDAAPVLRAIVNAVNVCHSM--GVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ ++G S + AV H ++HRDLK EN + +K+ DFG
Sbjct: 127 MESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL---SNQGTIKLCDFG 183
Query: 176 SA 177
SA
Sbjct: 184 SA 185
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 20 YEDVMLHYSFGRMLGRGRFGVTY---LCTENSTNMPYACK-SMAKKPKMKYAENDMMIRR 75
+ED++L G +GRG FG + L +N+ +C+ ++ K K+ + ++++
Sbjct: 113 HEDLVL----GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQ 168
Query: 76 EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
PNIV L + +++VMEL QGGD + +G + +L+
Sbjct: 169 --------YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQM 218
Query: 136 IVNA---VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ +A + S +HRDL N C ++ + +LK++DFG
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARN-CLVTEKN--VLKISDFG 258
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+ L E F D D NG +S ELR +T +G LT+ +V +++ AD+DG+G I+Y EF
Sbjct: 8 EELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
Query: 284 AATIQR 289
+ +
Sbjct: 68 RMMVSK 73
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 44/83 (53%), Gaps = 19/83 (22%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E L +AF+ FD+D +G ++ + + + H+ T+ +K + + +
Sbjct: 8 EELIEAFKVFDRDGNG------LISAAE----LRHVMTNLGEKL---------TDDEVDE 48
Query: 356 LVLQGDIDGNGNIDFIEFVNLMT 378
++ + DIDG+G+I++ EFV +M
Sbjct: 49 MIREADIDGDGHINYEEFVRMMV 71
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 24/163 (14%)
Query: 20 YEDVMLHYSFGRMLGRGRFGVTY---LCTENSTNMPYACK-SMAKKPKMKYAENDMMIRR 75
+ED++L G +GRG FG + L +N+ +C+ ++ K K+ + ++++
Sbjct: 113 HEDLVL----GEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQ 168
Query: 76 EIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
PNIV L + +++VMEL QGGD + +G + +L+
Sbjct: 169 --------YSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG--ARLRVKTLLQM 218
Query: 136 IVNA---VNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ +A + S +HRDL N C ++ + +LK++DFG
Sbjct: 219 VGDAAAGMEYLESKCCIHRDLAARN-CLVTEKN--VLKISDFG 258
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
+P +E + ++E F D D NG +S EL + +G M E +++ +++ DMDG+G +
Sbjct: 30 IPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQV 89
Query: 278 DYTEFTA 284
D+ EF
Sbjct: 90 DFEEFVT 96
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E + +AF+ FD+D +G F + E +R++ ++ + L+
Sbjct: 36 EEIREAFKVFDRDGNG---FISKQELGTAMRSLGYMPNEVE----------------LEV 76
Query: 356 LVLQGDIDGNGNIDFIEFVNLM 377
++ + D+DG+G +DF EFV L+
Sbjct: 77 IIQRLDMDGDGQVDFEEFVTLL 98
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL D + A P++++ ++ + CHS V
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKPEN + +K+ DFG A F
Sbjct: 125 LHRDLKPENLLI---NTEGAIKLADFGLARAF 153
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+ ++E F D D NG +S ELR +T +G LT+ +V +++ AD+DG+G ++Y EF
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 19/83 (22%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E + +AF+ FDKD +GY + E + N+ TD+ + +
Sbjct: 2 EEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE----------------VDE 42
Query: 356 LVLQGDIDGNGNIDFIEFVNLMT 378
++ + DIDG+G +++ EFV +MT
Sbjct: 43 MIREADIDGDGQVNYEEFVQMMT 65
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+ ++E F D D NG +S ELR +T +G LT+ +V +++ AD+DG+G ++Y EF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 19/82 (23%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E + +AF+ FDKD +GY + E + N+ TD+ + +
Sbjct: 5 EEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE----------------VDE 45
Query: 356 LVLQGDIDGNGNIDFIEFVNLM 377
++ + DIDG+G +++ EFV +M
Sbjct: 46 MIREADIDGDGQVNYEEFVQMM 67
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+ ++E F D D NG +S ELR +T +G LT+ +V +++ AD+DG+G ++Y EF
Sbjct: 5 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 63
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 19/83 (22%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E + +AF+ FDKD +GY + E + N+ TD+ + +
Sbjct: 5 EEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE----------------VDE 45
Query: 356 LVLQGDIDGNGNIDFIEFVNLMT 378
++ + DIDG+G +++ EFV +MT
Sbjct: 46 MIREADIDGDGQVNYEEFVQMMT 68
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 18/157 (11%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACK---SMAKKPKMKYAENDMMIRREIQIRRLL 83
+ GR +G G FG YL T TN A K K P++ Y E +I R+L
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY---------ESKIYRIL 59
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVN 141
G I ++ + +VM+L DLF+ K S + + ++N V
Sbjct: 60 QGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVE 117
Query: 142 VCHSMGVMHRDLKPENFCF-ISRDDNALLKVTDFGSA 177
HS +HRD+KP+NF + R N + + DFG A
Sbjct: 118 FVHSKSFLHRDIKPDNFLMGLGRRANQVY-IIDFGLA 153
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+ ++E F D D NG +S ELR +T +G LT+ +V +++ AD+DG+G ++Y EF
Sbjct: 9 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 67
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 19/83 (22%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E + +AF+ FDKD +GY + E + N+ TD+ + +
Sbjct: 9 EEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE----------------VDE 49
Query: 356 LVLQGDIDGNGNIDFIEFVNLMT 378
++ + DIDG+G +++ EFV +MT
Sbjct: 50 MIREADIDGDGQVNYEEFVQMMT 72
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+ ++E F D D NG +S ELR +T +G LT+ +V +++ AD+DG+G ++Y EF
Sbjct: 8 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 66
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 19/83 (22%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E + +AF+ FDKD +GY + E + N+ TD+ + +
Sbjct: 8 EEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE----------------VDE 48
Query: 356 LVLQGDIDGNGNIDFIEFVNLMT 378
++ + DIDG+G +++ EFV +MT
Sbjct: 49 MIREADIDGDGQVNYEEFVQMMT 71
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+ ++E F D D NG +S ELR +T +G LT+ +V +++ AD+DG+G ++Y EF
Sbjct: 6 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 64
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 19/83 (22%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E + +AF+ FDKD +GY + E + N+ TD+ + +
Sbjct: 6 EEIREAFRVFDKDGNGY---ISAAELRHVMTNLGEKLTDEE----------------VDE 46
Query: 356 LVLQGDIDGNGNIDFIEFVNLMT 378
++ + DIDG+G +++ EFV +MT
Sbjct: 47 MIREADIDGDGQVNYEEFVQMMT 69
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 23/163 (14%)
Query: 31 RMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
R++G G FG +C+ +P A K++ K+ Y E RR+ + G
Sbjct: 28 RVIGAGEFG--EVCSGRLKLPGKRELPVAIKTL----KVGYTEKQ---RRDFLGEASIMG 78
Query: 86 Q---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAV 140
Q PNI+ L+ V +V E + G L D + K G ++ +LR I +
Sbjct: 79 QFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGM 137
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
MG +HRDL N + N + KV+DFG + + E++
Sbjct: 138 KYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 177
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM----IRREIQIRR 81
+Y ++GRG +G YL + +T A K K+ D++ I REI I
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIK------KVNRMFEDLIDCKRILREITILN 80
Query: 82 LLSGQPNIVELKSAHEDETA----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIV 137
L I D+ +++V+E+ DL + +E +L ++
Sbjct: 81 RLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEEHIKTILYNLL 139
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRM 197
N H G++HRDLKP N C +++D +KV DFG A E DT+++ +
Sbjct: 140 LGENFIHESGIIHRDLKPAN-CLLNQD--CSVKVCDFGLARTINSEK-----DTNIVNDL 191
Query: 198 KQFRRMSKL-----KKLTVKVIVEYLPGEETQALKEKF 230
++ K+LT V+ + E L+E +
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY 229
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 29 FGRMLGR-GRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
F ++G G FG Y T++ A K + K + + D M+ +I P
Sbjct: 13 FWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILAS---CDHP 67
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVCHS 145
NIV+L A E + +++E C GG + D ++ + +E V + ++A+N H
Sbjct: 68 NIVKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
++HRDLK N F D +K+ DFG
Sbjct: 127 NKIIHRDLKAGNILFTLDGD---IKLADFG 153
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 13/172 (7%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKM-KYAENDMMIRREIQIR 80
+ + ++ + +GRG+F Y +P A K + M A D + +EI +
Sbjct: 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI--KEIDLL 86
Query: 81 RLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRII-----AKGYYSERDAAPVLRA 135
+ L+ PN+++ ++ ++ +++V+EL GDL R+I K ER
Sbjct: 87 KQLN-HPNVIKYYASFIEDNELNIVLELADAGDL-SRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEA 187
+ +A+ HS VMHRD+KP N FI+ ++K+ D G F + A
Sbjct: 145 LCSALEHMHSRRVMHRDIKPANV-FITA--TGVVKLGDLGLGRFFSSKTTAA 193
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 156 ENFCFISRDDNALLKVTDFGSAL--LFEEEGGEASDDTSVILRMKQFRRMSKLKKLTVKV 213
E F +D++ + + + GSAL L + + L K+F ++ K + K
Sbjct: 9 ECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFD-LATFKTVYRKP 67
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
I P E+++ + + F +D + NGT+ ELR L +G LT +V++LM+ + G
Sbjct: 68 I--KTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSG 125
Query: 274 NGAIDYTEF 282
+GAI+Y F
Sbjct: 126 DGAINYESF 134
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 34/165 (20%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
++E F D D +G +S +EL + L +G T ++ + G ++ EF A
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKEFDLA 58
Query: 286 TIQ-------RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKK 338
T + + E+S+ + AF+ DK+ +G + E Q + N+ T
Sbjct: 59 TFKTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQ---EAELRQLLLNLGDALTSSE-- 113
Query: 339 FGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKL 383
+++L+ + + G+G I++ FV+++ Y L
Sbjct: 114 --------------VEELMKEVSVSGDGAINYESFVDMLVTGYPL 144
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 7/159 (4%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK--YAENDMMIRREIQIRRLLS 84
YS LG G FG + + N K + K+ ++ + E+ + + ++I L
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 85 GQ-PNIVELKSAHEDETAVHVVMELCQGG-DLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
+ NI+++ E++ +VME G DLF I E A+ + R +V+AV
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
++HRD+K EN I ++ +K+ DFGSA E
Sbjct: 146 LRLKDIIHRDIKDEN---IVIAEDFTIKLIDFGSAAYLE 181
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM-IRREIQIRRLLSGQPNIVE 91
LG G +G Y T A K + E+D+ I +EI I + P++V+
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVP-------VESDLQEIIKEISIMQQCDS-PHVVK 88
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHSMGVMH 150
++ T + +VME C G + D I + +E + A +L++ + + H M +H
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIH 148
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSA 177
RD+K N ++ + +A K+ DFG A
Sbjct: 149 RDIKAGNI-LLNTEGHA--KLADFGVA 172
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+ ++E F D D NG +S ELR +T +G LT+ +V +++ AD+DG+G ++Y EF
Sbjct: 29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 19/83 (22%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E + +AF+ DKD +GY + E + N+ TD+ + +
Sbjct: 29 EEIREAFRVEDKDGNGY---ISAAELRHVMTNLGEKLTDEE----------------VDE 69
Query: 356 LVLQGDIDGNGNIDFIEFVNLMT 378
++ + DIDG+G +++ EFV +MT
Sbjct: 70 MIREADIDGDGQVNYEEFVQMMT 92
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y G +LG G +G ++ T A K + KK + + +++EIQ+ R L +
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHK 66
Query: 87 PNIVELKSA--HEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRA------I 136
N+++L +E++ +++VME C G ++ D + K + PV +A +
Sbjct: 67 -NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRF-------PVCQAHGYFCQL 118
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
++ + HS G++H+D+KP N + LK++ G A E A+DDT
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTT---GGTLKISALGVA---EALHPFAADDT 167
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 26/163 (15%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
E+ Q + E F D + +G L Y EL+ +G L + ++ L++ D +G Y
Sbjct: 20 EQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKYD 79
Query: 281 EFTAA----TIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKA 336
+F ++R L+ + +AFQ FD D++G +I+N+ + A
Sbjct: 80 DFYIVXGEKILKRDPLDE---IKRAFQLFDDDHTG----------KISIKNLRRV----A 122
Query: 337 KKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD 379
K+ G T + L+ + + D+DG+G I+ EF+ + TD
Sbjct: 123 KELGETLTDE-----ELRAXIEEFDLDGDGEINENEFIAICTD 160
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y GR +G G FG YL T+ + A K K K + E +I +++ G
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP------QLHIESKIYKMMQGG 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
I ++ + +VMEL DLF+ K +S + + +++ + H
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S +HRD+KP+NF L+ + DFG A
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
+L E K F D D G +S EL + +G T+ ++ ++E D DG+G
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
ID+ EF +++ K + E L+ F+ FDK+ G F + E + +R
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADG---FIDIEELGEILRATGEHV 129
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
T++ ++ L+ D + +G IDF EF+ +M
Sbjct: 130 TEED----------------IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L ++ + D DG+G IDF EF V M + K ++ E L F+ DKN+D FI + E
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEE 117
Query: 409 L 409
L
Sbjct: 118 L 118
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 209 LTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA 268
+ V+ + E G+ + L F D + +G + +EL L G +TE D++ LM+
Sbjct: 81 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 269 ADMDGNGAIDYTEF 282
+D + +G ID+ EF
Sbjct: 141 SDKNNDGRIDFDEF 154
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 10/153 (6%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y GR +G G FG YL T+ + A K K K + E +I +++ G
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP------QLHIESKIYKMMQGG 62
Query: 87 PNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
I ++ + +VMEL DLF+ K +S + + +++ + H
Sbjct: 63 VGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 120
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S +HRD+KP+NF L+ + DFG A
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKS--MAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G+F Y + +TN A K + + + K N +R EI++ + LS PNI+
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALR-EIKLLQELS-HPNII 75
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKG---YYSERDAAPVLRAIVNAVNVCHSMG 147
L A ++ + +V + + DL +I K + + + + H
Sbjct: 76 GLLDAFGHKSNISLVFDFMET-DL--EVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 132
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLKP N D+N +LK+ DFG A
Sbjct: 133 ILHRDLKPNNLLL---DENGVLKLADFGLA 159
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
+L E K F D D G +S EL + +G T+ ++ ++E D DG+G
Sbjct: 10 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 69
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
ID+ EF +++ K + E L+ F+ FDK+ G F + E + +R
Sbjct: 70 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADG---FIDIEELGEILRATGEHV 126
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
T++ ++ L+ D + +G IDF EF+ +M
Sbjct: 127 TEED----------------IEDLMKDSDKNNDGRIDFDEFLKMM 155
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L ++ + D DG+G IDF EF V M + K ++ E L F+ DKN+D FI + E
Sbjct: 55 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEE 114
Query: 409 L 409
L
Sbjct: 115 L 115
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 209 LTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA 268
+ V+ + E G+ + L F D + +G + +EL L G +TE D++ LM+
Sbjct: 78 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 137
Query: 269 ADMDGNGAIDYTEF 282
+D + +G ID+ EF
Sbjct: 138 SDKNNDGRIDFDEF 151
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
+L E K F D D G +S EL + +G T+ ++ ++E D DG+G
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
ID+ EF +++ K + E L+ F+ FDK+ G F + E + +R
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADG---FIDIEELGEILRATGEHV 129
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
T++ ++ L+ D + +G IDF EF+ +M
Sbjct: 130 TEED----------------IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L ++ + D DG+G IDF EF V M + K ++ E L F+ DKN+D FI + E
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEE 117
Query: 409 L 409
L
Sbjct: 118 L 118
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 209 LTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA 268
+ V+ + E G+ + L + F D + +G + +EL L G +TE D++ LM+
Sbjct: 81 MMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 269 ADMDGNGAIDYTEF 282
+D + +G ID+ EF
Sbjct: 141 SDKNNDGRIDFDEF 154
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 74/174 (42%), Gaps = 29/174 (16%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDM-------------- 71
Y+ +G+G +GV L + N YA K ++KK ++ A
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 72 --------MIRREIQIRRLLSGQPNIVELKSAHED--ETAVHVVMELCQGGDLFDRIIAK 121
+ +EI I + L PN+V+L +D E +++V EL G + + K
Sbjct: 74 IQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 122 GYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
SE A + ++ + H ++HRD+KP N + D + +K+ DFG
Sbjct: 133 PL-SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNL-LVGEDGH--IKIADFG 182
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
++G G FG Y + A K+ P ++ +R+E ++ +L PNI+
Sbjct: 14 IIGIGGFGKVYRAFWIGDEV--AVKAARHDPDEDISQTIENVRQEAKLFAMLK-HPNIIA 70
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS---MGV 148
L+ E + +VME +GG L +R+++ I +N H + +
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPI 129
Query: 149 MHRDLKPENFCFISRDDNA-----LLKVTDFGSA 177
+HRDLK N + + +N +LK+TDFG A
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 69/174 (39%), Gaps = 28/174 (16%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI-RRLLSG 85
Y LG G FG C ++ + + K +Y E R EIQ+ L +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCE---AARSEIQVLEHLNTT 71
Query: 86 QPN----IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSER--DAAPVLRAIVNA 139
PN V++ E + +V EL G +D I G+ R + I +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 140 VNVCHSMGVMHRDLKPENFCF------------ISRDDNAL----LKVTDFGSA 177
VN HS + H DLKPEN F I RD+ L +KV DFGSA
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 9/166 (5%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
G+ V+ Y + LG+G +G+ + + T A K + + + + RE
Sbjct: 1 GRVDRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA--FQNSTDAQRTFRE 58
Query: 77 IQIRRLLSGQPNIVELKSA--HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
I I LSG NIV L + +++ V++V + + +I V+
Sbjct: 59 IMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVY 116
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
++ + HS G++HRD+KP N + +KV DFG + F
Sbjct: 117 QLIKVIKYLHSGGLLHRDMKPSNILL---NAECHVKVADFGLSRSF 159
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL D + A P++++ ++ + CHS V
Sbjct: 71 LDVIHTENKLYLVFEFLSM-DLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 69
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL D + A P++++ ++ + CHS V
Sbjct: 70 LDVIHTENKLYLVFEFLSM-DLKDFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 127 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 155
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 69/174 (39%), Gaps = 28/174 (16%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQI-RRLLSG 85
Y LG G FG C ++ + + K +Y E R EIQ+ L +
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCE---AARSEIQVLEHLNTT 71
Query: 86 QPN----IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSER--DAAPVLRAIVNA 139
PN V++ E + +V EL G +D I G+ R + I +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 140 VNVCHSMGVMHRDLKPENFCF------------ISRDDNAL----LKVTDFGSA 177
VN HS + H DLKPEN F I RD+ L +KV DFGSA
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 65/157 (41%), Gaps = 22/157 (14%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREI-QIRRLLS----GQP 87
LGRG FG + + T A K +R E+ ++ L++ P
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKK---------------VRLEVFRVEELVACAGLSSP 124
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
IV L A + V++ MEL +GG L I G E A L + + H+
Sbjct: 125 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR 184
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
++H D+K +N S D + + DFG AL + +G
Sbjct: 185 ILHGDVKADNVLLSS--DGSRAALCDFGHALCLQPDG 219
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ KE F D D NG++S EL + +G +E +V LM D+DGN I
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 278 DYTEFTA 284
+++EF A
Sbjct: 64 EFSEFLA 70
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMM----IRREIQIRR 81
+Y ++GRG +G YL + + N A K K+ D++ I REI I
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIK------KVNRMFEDLIDCKRILREITILN 82
Query: 82 LLSGQPNIVELKSAHEDETAV-----HVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L I+ L E + ++V+E+ DL + +E+ +L +
Sbjct: 83 RLKSD-YIIRLHDLIIPEDLLKFDELYIVLEIADS-DLKKLFKTPIFLTEQHVKTILYNL 140
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ H G++HRDLKP N C +++D +K+ DFG A
Sbjct: 141 LLGEKFIHESGIIHRDLKPAN-CLLNQD--CSVKICDFGLA 178
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 204 SKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVK 263
+ ++KL + + G Q L F ++D D + +L DE R GL K+G +L + + +
Sbjct: 19 ATMEKLRAQCLSRGASG--IQGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAE 76
Query: 264 QLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
+ D +G+G +D EF A R ++ AF D+ G
Sbjct: 77 GVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDG 124
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 29/144 (20%)
Query: 277 IDYTEFTAATIQRQKLERS----EYLSKAFQYFDKDNS---GYDEFRAMVESPQTIRNVS 329
+D + T ++ Q L R + L++ F+ D+D S DEFR +
Sbjct: 14 MDAVDATMEKLRAQCLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGL---------- 63
Query: 330 HIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELL 389
K GL Q A + +K D +G+G +D EF+ + ++
Sbjct: 64 -------AKLGL-VLDQAEAEGVCRKW----DRNGSGTLDLEEFLRALRPPMSQAREAVI 111
Query: 390 EKAFQYLDKNSDQFITVNELETAF 413
AF LD++ D +TV++L +
Sbjct: 112 AAAFAKLDRSGDGVVTVDDLRGVY 135
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 23/165 (13%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
+L E K F D D G +S EL + +G T+ ++ ++E D DG+G
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIY 332
ID+ EF +++ K + E L F+ FDK+ G F + E + +R
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADG---FIDIEELGEILRATGEHV 129
Query: 333 TDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
T++ ++ L+ D + +G IDF EF+ +M
Sbjct: 130 TEED----------------IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L ++ + D DG+G IDF EF V M + K ++ E LE F+ DKN+D FI + E
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEE 117
Query: 409 L 409
L
Sbjct: 118 L 118
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 209 LTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA 268
+ V+ + E G+ + L++ F D + +G + +EL L G +TE D++ LM+
Sbjct: 81 MMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKD 140
Query: 269 ADMDGNGAIDYTEF 282
+D + +G ID+ EF
Sbjct: 141 SDKNNDGRIDFDEF 154
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
V +HY GR +G G FGV + T N A K ++ + +R E + +L
Sbjct: 7 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR------SDAPQLRDEYRTYKL 60
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L+G I + ++ +V++L DL D K +S + A + ++ V
Sbjct: 61 LAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK--FSVKTVAMAAKQMLARV 118
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNA---LLKVTDFGSALLFEE 182
H +++RD+KP+NF I R ++ ++ V DFG + +
Sbjct: 119 QSIHEKSLVYRDIKPDNF-LIGRPNSKNANMIYVVDFGMVKFYRD 162
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
LG G FG Y T A K + K + + D ++ EI P IV+L
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL--EDYIVEIEILAT---CDHPYIVKL 81
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIA---KGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
A+ + + +++E C GG + D I+ +G +E V R ++ A+N HS ++
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL-TEPQIQVVCRQMLEALNFLHSKRII 139
Query: 150 HRDLKPENFCFISRDDNALLKVTDFG 175
HRDLK N D +++ DFG
Sbjct: 140 HRDLKAGNVLMTLEGD---IRLADFG 162
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
V +HY GR +G G FGV + T N A K ++ + +R E + +L
Sbjct: 8 VGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRR------SDAPQLRDEYRTYKL 61
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L+G I + ++ +V++L DL D K +S + A + ++ V
Sbjct: 62 LAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRK--FSVKTVAMAAKQMLARV 119
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNA---LLKVTDFGSALLFEE 182
H +++RD+KP+NF I R ++ ++ V DFG + +
Sbjct: 120 QSIHEKSLVYRDIKPDNF-LIGRPNSKNANMIYVVDFGMVKFYRD 163
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
LG G FG Y T A K + K + + D ++ EI P IV+L
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEEL--EDYIVEIEILAT---CDHPYIVKL 73
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIA---KGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
A+ + + +++E C GG + D I+ +G +E V R ++ A+N HS ++
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGL-TEPQIQVVCRQMLEALNFLHSKRII 131
Query: 150 HRDLKPENFCFISRDDNALLKVTDFG 175
HRDLK N D +++ DFG
Sbjct: 132 HRDLKAGNVLMTLEGD---IRLADFG 154
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+ LKE F +D +K G + D LR L +G LTE +++ ++ D DG+G +DY EF
Sbjct: 7 RELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 68
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 69 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKPEN + +K+ DFG A F
Sbjct: 126 LHRDLKPENLLI---NTEGAIKLADFGLARAF 154
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 15/158 (9%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY-AENDMMIRREIQIRRLLSGQPN 88
G +LG+G FG T T + M K +++ E +E+++ R L PN
Sbjct: 15 GEVLGKGCFGQAIKVTHRETG-----EVMVMKELIRFDEETQRTFLKEVKVMRCLE-HPN 68
Query: 89 IVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY---YSERDAAPVLRAIVNAVNVCHS 145
+++ + ++ + E +GG L R I K Y + I + + HS
Sbjct: 69 VLKFIGVLYKDKRLNFITEYIKGGTL--RGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
M ++HRDL N C + + N + V DFG A L +E
Sbjct: 127 MNIIHRDLNSHN-CLVRENKNVV--VADFGLARLMVDE 161
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 69
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 70 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKPEN + +K+ DFG A F
Sbjct: 127 LHRDLKPENLLI---NTEGAIKLADFGLARAF 155
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G+G FG Y +N T A K + + + I++EI + P I
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDL---EEAEDEIEDIQQEITVLSQCDS-PYITRY 82
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
++ T + ++ME GG D ++ G E A +LR I+ ++ HS +HRD
Sbjct: 83 FGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSERKIHRD 141
Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
+K N + D +K+ DFG A
Sbjct: 142 IKAANVLLSEQGD---VKLADFGVA 163
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 53/116 (45%), Gaps = 24/116 (20%)
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ----------GGDLFDRIIAKGYY 124
REI + + L + NIV L + + +V E C GDL D I K +
Sbjct: 50 REICLLKELKHK-NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSF- 106
Query: 125 SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
L ++ + CHS V+HRDLKP+N I+R N LK+ DFG A F
Sbjct: 107 --------LFQLLKGLGFCHSRNVLHRDLKPQNL-LINR--NGELKLADFGLARAF 151
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 25/166 (15%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
+L E K F D D G +S EL + +G T+ ++ ++E D DG+G
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVS-HI 331
ID+ EF +++ K + E L+ F+ FDK+ G F + E + +R H+
Sbjct: 73 IDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADG---FIDIEELGEILRATGEHV 129
Query: 332 YTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
+ ++ L+ D + +G IDF EF+ +M
Sbjct: 130 IEED-----------------IEDLMKDSDKNNDGRIDFDEFLKMM 158
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L ++ + D DG+G IDF EF V M + K ++ E L F+ DKN+D FI + E
Sbjct: 58 LDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEE 117
Query: 409 L 409
L
Sbjct: 118 L 118
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%)
Query: 209 LTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA 268
+ V+ + E G+ + L F D + +G + +EL L G + E D++ LM+
Sbjct: 81 MMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKD 140
Query: 269 ADMDGNGAIDYTEF 282
+D + +G ID+ EF
Sbjct: 141 SDKNNDGRIDFDEF 154
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 25 LHYSFGRM-LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRL 82
+H++ ++ LGRG FG + + T + KK +++ + ++M +
Sbjct: 73 VHWATHQLRLGRGSFGEVHRMEDKQTGF----QCAVKKVRLEVFRAEELMACAGLT---- 124
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
P IV L A + V++ MEL +GG L + +G E A L + +
Sbjct: 125 ---SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEY 181
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
HS ++H D+K +N S +A L DFG A+ + +G
Sbjct: 182 LHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDG 221
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ ++ CHS V
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLSFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G+G FG + +N T A K + + + I++EI + P + +
Sbjct: 35 IGKGSFGEVFKGIDNRTQKVVAIKIIDL---EEAEDEIEDIQQEITVLSQCD-SPYVTKY 90
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
++ +T + ++ME GG D ++ G E A +LR I+ ++ HS +HRD
Sbjct: 91 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 149
Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
+K N ++ +K+ DFG A
Sbjct: 150 IKAANVLL---SEHGEVKLADFGVA 171
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 19/163 (11%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ LG G FG T A K ++ K E + EIQI + L+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL---EIQIMKKLN-H 72
Query: 87 PNIVELKSAHEDETAVH---------VVMELCQGGDL---FDRIIAKGYYSERDAAPVLR 134
PN+V SA E + + ME C+GGDL ++ E +L
Sbjct: 73 PNVV---SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 129
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I +A+ H ++HRDLKPEN + K+ D G A
Sbjct: 130 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 172
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 19/163 (11%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
+ LG G FG T A K ++ K E + EIQI + L+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCL---EIQIMKKLN-H 71
Query: 87 PNIVELKSAHEDETAVH---------VVMELCQGGDL---FDRIIAKGYYSERDAAPVLR 134
PN+V SA E + + ME C+GGDL ++ E +L
Sbjct: 72 PNVV---SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I +A+ H ++HRDLKPEN + K+ D G A
Sbjct: 129 DISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYA 171
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G+G FG + +N T A K + + + I++EI + P + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDL---EEAEDEIEDIQQEITVLSQCD-SPYVTKY 70
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
++ +T + ++ME GG D ++ G E A +LR I+ ++ HS +HRD
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
+K N ++ +K+ DFG A
Sbjct: 130 IKAANVLL---SEHGEVKLADFGVA 151
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 25 LHYSFGRM-LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMK-YAENDMMIRREIQIRRL 82
+H++ ++ LGRG FG + + T + KK +++ + ++M +
Sbjct: 92 VHWATHQLRLGRGSFGEVHRMEDKQTGF----QCAVKKVRLEVFRAEELMACAGLT---- 143
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
P IV L A + V++ MEL +GG L + +G E A L + +
Sbjct: 144 ---SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEY 200
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
HS ++H D+K +N S +A L DFG A+ + +G
Sbjct: 201 LHSRRILHGDVKADNVLLSSDGSHAAL--CDFGHAVCLQPDG 240
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 12/103 (11%)
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFD---RIIAKGYYS-----ERDAAPVLRAIV 137
PNIV ++ + + +VM+L GG + D I+AKG + E A +LR ++
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG-SALL 179
+ H G +HRD+K N ++ +++ DFG SA L
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFL 171
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G+G FG + +N T A K + + + I++EI + P + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDL---EEAEDEIEDIQQEITVLSQCD-SPYVTKY 70
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
++ +T + ++ME GG D ++ G E A +LR I+ ++ HS +HRD
Sbjct: 71 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 129
Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
+K N ++ +K+ DFG A
Sbjct: 130 IKAANVLL---SEHGEVKLADFGVA 151
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 31 RMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
R++G G FG +C+ ++ A K++ K+ Y E RR+ + G
Sbjct: 49 RVIGAGEFG--EVCSGRLKLPGKRDVAVAIKTL----KVGYTEKQ---RRDFLCEASIMG 99
Query: 86 Q---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAV 140
Q PN+V L+ V +V+E + G L D + K G ++ +LR I +
Sbjct: 100 QFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGM 158
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
MG +HRDL N I + N + KV+DFG + + E++
Sbjct: 159 RYLADMGYVHRDLAARN---ILVNSNLVCKVSDFGLSRVIEDD 198
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFD---RIIAKGYYS-----ERDAAPVLRAIV 137
PNIV ++ + + +VM+L GG + D I+AKG + E A +LR ++
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEAS 188
+ H G +HRD+K N ++ +++ DFG + F GG+ +
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVS-AFLATGGDIT 173
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 71 LDVIHTENKLYLVFEFLSM-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKPEN + +K+ DFG A F
Sbjct: 128 LHRDLKPENLLI---NTEGAIKLADFGLARAF 156
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 68
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 69 LDVIHTENKLYLVFEFLSM-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKPEN + +K+ DFG A F
Sbjct: 126 LHRDLKPENLLI---NTEGAIKLADFGLARAF 154
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G+G FG + +N T A K + + + I++EI + P + +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDL---EEAEDEIEDIQQEITVLSQCDS-PYVTKY 85
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRD 152
++ +T + ++ME GG D ++ G E A +LR I+ ++ HS +HRD
Sbjct: 86 YGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSEKKIHRD 144
Query: 153 LKPENFCFISRDDNALLKVTDFGSA 177
+K N ++ +K+ DFG A
Sbjct: 145 IKAANVLL---SEHGEVKLADFGVA 166
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 10/153 (6%)
Query: 27 YSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ 86
Y GR +G G FG YL ++ A K K K + E + +++ G
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHP------QLHIESKFYKMMQGG 64
Query: 87 PNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
I +K + +VMEL DLF+ K +S + + +++ + H
Sbjct: 65 VGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIH 122
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S +HRD+KP+NF L+ + DFG A
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSM 146
P IV L A + V++ MEL +GG L I G E A L + + H+
Sbjct: 110 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
++H D+K +N S A L DFG AL + +G
Sbjct: 170 RILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDG 205
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
K VE L E+ K F I + ++G++S EL + +G T +++++++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR 326
DG+G +D+ EF ++ K + E LS F+ FDK+ GY + +
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEEL-------- 117
Query: 327 NVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
K L T + + +++L+ GD + +G ID+ EF+ M
Sbjct: 118 -----------KIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L++++ + D DG+G +DF EF V M D K ++ E L F+ DKN+D +I + E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 409 L 409
L
Sbjct: 117 L 117
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 22/157 (14%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREI-QIRRLLS----GQP 87
+GRG FG + + T A K +R E+ ++ L++ P
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKK---------------VRLEVFRVEELVACAGLSSP 126
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
IV L A + V++ MEL +GG L I G E A L + + H+
Sbjct: 127 RIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRR 186
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
++H D+K +N S A L DFG AL + +G
Sbjct: 187 ILHGDVKADNVLLSSDGSRAAL--CDFGHALCLQPDG 221
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+ ++E F D D NG +S +LR +T +G LT+ +V +++ AD+DG+G ++Y +F
Sbjct: 7 EEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDF 65
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 19/83 (22%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
E + +AF+ FDKD +GY + ++ H+ T+ +K + +
Sbjct: 7 EEIREAFRVFDKDGNGY----------ISAADLRHVMTNLGEKL---------TDEEVDE 47
Query: 356 LVLQGDIDGNGNIDFIEFVNLMT 378
++ + DIDG+G +++ +FV +MT
Sbjct: 48 MIREADIDGDGQVNYEDFVQMMT 70
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 30/174 (17%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
K VE L E+ K F I + ++G++S EL + +G T +++++++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGY---DEFRAMVESPQ 323
DG+G +D+ EF ++ K + E LS F+ +DK+ GY DE + M+++
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQA-- 123
Query: 324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
T + + +++L+ GD + +G ID+ EF+ M
Sbjct: 124 --------------------TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 30/174 (17%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
K VE L E+ K F I + ++G++S EL + +G T +++++++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGY---DEFRAMVESPQ 323
DG+G +D+ EF ++ K + E LS F+ FDK+ GY DE + M+++
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQA-- 123
Query: 324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
T + + +++L+ GD + +G ID+ E++ M
Sbjct: 124 --------------------TGETITEDDIEELMKDGDKNNDGRIDYDEWLEFM 157
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L++++ + D DG+G +DF EF V M D K ++ E L F+ DKN+D +I ++E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 409 L 409
L
Sbjct: 117 L 117
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 24/171 (14%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
K VE L E+ K F I + ++G++S EL + +G T +++++++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLER----SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR 326
DG+G +D+ EF ++ K + E LS F+ FDK+ GY + +
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEEL-------- 117
Query: 327 NVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
K L T + + +++L+ GD + +G ID+ EF+ M
Sbjct: 118 -----------KIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L++++ + D DG+G +DF EF V M D K +T E L F+ DKN+D +I + E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 409 L 409
L
Sbjct: 117 L 117
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 74
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 75 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 132 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 160
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 68
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 69 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 126 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 154
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 71 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 69/161 (42%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 95
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V L G DL+ +++ + S L I
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYLVTHL-MGADLY-KLLKTQHLSNDHICYFLYQI 153
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 191
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 71 LDVIHTENKLYLVFEFLHQ-DLKTFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 68
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 69 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 126 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 154
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 71
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 72 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 129 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 157
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 68
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 69 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 126 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 154
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 69
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 70 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 127 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 155
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 74
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 75 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 131
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 132 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 160
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 71
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 72 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 128
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 129 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 157
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 71 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 69
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 70 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 127 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 155
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74 RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
R EI + +L I+ L + +++VME C DL + K +
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 132
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
+ ++ AV+ H G++H DLKP NF + + +LK+ DFG A + + D+
Sbjct: 133 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 188
Query: 193 V 193
V
Sbjct: 189 V 189
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRRE 76
G+P+ DV Y+ + +G G +G+ ++ A K ++ Y + + RE
Sbjct: 36 GQPF-DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTL---RE 91
Query: 77 IQIRRLLSGQPNIVELK-----SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAP 131
IQI L N++ ++ S E V++V +L + DL+ +++ S
Sbjct: 92 IQIL-LRFRHENVIGIRDILRASTLEAMRDVYIVQDLMET-DLY-KLLKSQQLSNDHICY 148
Query: 132 VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
L I+ + HS V+HRDLKP N + D LK+ DFG A + + E
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPE 197
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
++ KE F D+++ G ++ + L+ L + G + ++ AD GNG I +
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 281 EFTAATIQRQKLERSE-YLSKAFQYFDKDNSGY 312
EF + +R K SE L +AF+ FD + +GY
Sbjct: 63 EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGY 95
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV 357
+AF+ FD + +G+ E QT+ + + A ++
Sbjct: 8 FKEAFELFDSERTGF----ITKEGLQTVLKQFGVRVEPAA---------------FNEMF 48
Query: 358 LQGDIDGNGNIDFIEFVNLMTDIYKLETPE-LLEKAFQYLDKNSDQFITVNELETAFKEN 416
+ D GNG I F EF+++M K T E +L +AF+ D +I L+ A
Sbjct: 49 NEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALL-- 106
Query: 417 NMGD 420
N+GD
Sbjct: 107 NLGD 110
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74 RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
R EI + +L I+ L + +++VME C DL + K +
Sbjct: 55 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 113
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
+ ++ AV+ H G++H DLKP NF + + +LK+ DFG A + + D+
Sbjct: 114 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 169
Query: 193 V 193
V
Sbjct: 170 V 170
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 123 YYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA--LLF 180
Y +E +L ++ V HS G++HRDLKP N C +++D +KV DFG A + +
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPAN-CLVNQD--CSVKVCDFGLARTVDY 208
Query: 181 EEEGGEA------SDDTSVILRMKQFRRMSKLKK-LTVKVIVEYLPGEETQALKEKFIE 232
E G DD +++ F LK+ LT V+ + E L+E + E
Sbjct: 209 PENGNSQLPISPREDDMNLV----TFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTE 263
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
K VE L E+ K F I + ++G +S EL + +G T +++++++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQ----RQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR 326
DG+G +D+ EF ++ K + E LS F+ FDK+ GY + +
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEEL-------- 117
Query: 327 NVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
K L T + + +++L+ GD + +G ID+ EF+ M
Sbjct: 118 -----------KIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 209 LTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA 268
+ V+ + + G+ + L + F D + +G + +EL+ L G +TE D+++LM+
Sbjct: 80 MMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKD 139
Query: 269 ADMDGNGAIDYTEF 282
D + +G IDY EF
Sbjct: 140 GDKNNDGRIDYDEF 153
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L++++ + D DG+G +DF EF V M D K +T E L F+ DKN+D +I + E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 409 L 409
L
Sbjct: 117 L 117
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N + ++ L++ D+G A +
Sbjct: 145 DYCHSMGIMHRDVKPHN--VLIDHEHRKLRLIDWGLAEFYH 183
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG A + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLARVLEDD 200
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74 RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
R EI + +L I+ L + +++VME C DL + K +
Sbjct: 74 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 132
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
+ ++ AV+ H G++H DLKP NF + + +LK+ DFG A + + D+
Sbjct: 133 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQ 188
Query: 193 V 193
V
Sbjct: 189 V 189
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 87 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 143
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 144 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 182
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 29/172 (16%)
Query: 215 VEYLPGEETQALKEKFIEMDT-DKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
V L + + L+ F + +T + +G +S D++ L +G T+ ++QL++ D G
Sbjct: 4 VSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFG 63
Query: 274 NGAIDY-------TEFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIR 326
NG ID+ F + +++++ L +AF+ +DK+ +GY
Sbjct: 64 NGDIDFDSFKIIGARFLGEEVNPEQMQQE--LREAFRLYDKEGNGY-------------- 107
Query: 327 NVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMT 378
I TD ++ L + + L ++ + D DG+G +DF EF+ +MT
Sbjct: 108 ----ISTDVMREI-LAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ + ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--RQTLTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74 RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
R EI + +L I+ L + +++VME C DL + K +
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 160
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
+ ++ AV+ H G++H DLKP NF + + +LK+ DFG A + + D+
Sbjct: 161 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 193 V 193
V
Sbjct: 217 V 217
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 86 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 142
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 143 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 181
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 93 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 149
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 150 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 188
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74 RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
R EI + +L I+ L + +++VME C DL + K +
Sbjct: 58 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 116
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
+ ++ AV+ H G++H DLKP NF + + +LK+ DFG A + + D+
Sbjct: 117 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 172
Query: 193 V 193
V
Sbjct: 173 V 173
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 53/116 (45%), Gaps = 24/116 (20%)
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQ----------GGDLFDRIIAKGYY 124
REI + + L + NIV L + + +V E C GDL D I K +
Sbjct: 50 REICLLKELKHK-NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDL-DPEIVKSF- 106
Query: 125 SERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
L ++ + CHS V+HRDLKP+N I+R N LK+ +FG A F
Sbjct: 107 --------LFQLLKGLGFCHSRNVLHRDLKPQNL-LINR--NGELKLANFGLARAF 151
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 87 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 143
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 144 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 182
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74 RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
R EI + +L I+ L + +++VME C DL + K +
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 160
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
+ ++ AV+ H G++H DLKP NF + + +LK+ DFG A + + D+
Sbjct: 161 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 193 V 193
V
Sbjct: 217 V 217
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74 RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
R EI + +L I+ L + +++VME C DL + K +
Sbjct: 102 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 160
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
+ ++ AV+ H G++H DLKP NF + + +LK+ DFG A + + D+
Sbjct: 161 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 216
Query: 193 V 193
V
Sbjct: 217 V 217
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 77
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 135
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTSD---LKICDFGLA 173
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 74 RREIQ-IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV 132
R EI + +L I+ L + +++VME C DL + K +
Sbjct: 54 RNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSY 112
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTS 192
+ ++ AV+ H G++H DLKP NF + + +LK+ DFG A + + D+
Sbjct: 113 WKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 193 V 193
V
Sbjct: 169 V 169
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK-LERSEYLSKAFQ 303
G ID+ EF ++ K + E + +AF+
Sbjct: 61 GTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L+ ++ + D DGNG IDF EF+ +M
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 39/170 (22%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMA----KKPKMKYAENDMMIR 74
P+E + G ++G+GRFG Y + A + + + ++K + ++M
Sbjct: 31 PFEQL----EIGELIGKGRFGQVY---HGRWHGEVAIRLIDIERDNEDQLKAFKREVMAY 83
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL- 133
R+ + N+V A + ++ LC+G L+ + RDA VL
Sbjct: 84 RQTR-------HENVVLFMGACMSPPHLAIITSLCKGRTLYSVV--------RDAKIVLD 128
Query: 134 --------RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ IV + H+ G++H+DLK +N + DN + +TDFG
Sbjct: 129 VNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKVVITDFG 174
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNI+ L +D + +V E D F ++ ++ D + I+ A+
Sbjct: 88 LRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLYQT--LTDYDIRFYMYEILKAL 144
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
+ CHSMG+MHRD+KP N ++ L++ D+G A +
Sbjct: 145 DYCHSMGIMHRDVKPHNVMI--DHEHRKLRLIDWGLAEFYH 183
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGAVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT--AATI 287
F ++D + +G++SY+E++A ++ + E ++ + +A D+DGNG ID EFT AA +
Sbjct: 6 FKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFAAAV 65
Query: 288 QRQKLERSEY-LSKAFQYFDKDNSG 311
+ Q L + L ++ D D G
Sbjct: 66 KEQDLSDEKVGLKILYKLMDADGDG 90
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 75
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 133
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLA 171
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ Q ++E F DTD +GT+ EL+ + +G + ++K+++ D DG+G I
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 278 DYTEF 282
D+ EF
Sbjct: 84 DFEEF 88
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMT 378
+KK++ + D DG+G IDF EF+ +MT
Sbjct: 68 IKKMISEIDKDGSGTIDFEEFLTMMT 93
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 257 LTEFDVKQLMEAADM---DGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG-- 311
LTE +++ EA D+ DG+G ID E A + E + K DKD SG
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 312 -YDEFRAMV 319
++EF M+
Sbjct: 84 DFEEFLTMM 92
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 19 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 69
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 129 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 171
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 67 LDVIHTENKLYLVFEHVHQ-DLKTFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
L E+ Q +KE F DT+K G++ Y EL+ + +G + + ++ +LM D +GNG I
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 278 DYTEFTAATIQRQK 291
+ +F ++ K
Sbjct: 61 GFDDFLDIMTEKIK 74
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 75
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 133
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 171
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 19 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 69
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 128
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 129 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 171
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT--KVGS-MLTEFDVKQLMEAADMDGN 274
L G+ +K+ F+ +D DK+G + DEL+ L K G+ LT+ + K ++A D DG+
Sbjct: 36 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 95
Query: 275 GAIDYTEFTA 284
GAI E+ A
Sbjct: 96 GAIGVEEWVA 105
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLT--KVGS-MLTEFDVKQLMEAADMDGN 274
L G+ +K+ F+ +D DK+G + DEL+ L K G+ LT+ + K ++A D DG+
Sbjct: 35 LSGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGD 94
Query: 275 GAIDYTEFTA 284
GAI E+ A
Sbjct: 95 GAIGVEEWVA 104
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK----KPKMKYAENDMMIRREIQ 78
V+ Y + +G G G+ + A K +++ + K A ++++ + +
Sbjct: 22 VLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVN 81
Query: 79 IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
+ ++ G N+ + + E+ V++VMEL ++I ER + +L ++
Sbjct: 82 HKNII-GLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSY-LLYQMLV 137
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ HS G++HRDLKP N S +A LK+ DFG A
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLA 173
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGFVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 75
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 133
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 171
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 36 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 86
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 145
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 146 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 188
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 30/174 (17%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
K VE L E+ K F I + ++G++S EL + +G T +++++++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGY---DEFRAMVESPQ 323
DG+G +D+ EF ++ K + E LS F+ DK+ GY DE + M+++
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQA-- 123
Query: 324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
T + + +++L+ GD + +G ID+ EF+ M
Sbjct: 124 --------------------TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L++++ + D DG+G +DF EF V M D K ++ E L F+ DKN+D +I ++E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDE 116
Query: 409 L 409
L
Sbjct: 117 L 117
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 80/174 (45%), Gaps = 30/174 (17%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
K VE L E+ K F I + ++G++S EL + +G T +++++++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQKLE----RSEYLSKAFQYFDKDNSGY---DEFRAMVESPQ 323
DG+G +D+ EF ++ K + E LS F+ FDK+ GY DE + M+++
Sbjct: 66 EDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQA-- 123
Query: 324 TIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
T + + +++L+ GD + +G ID+ E + M
Sbjct: 124 --------------------TGETITEDDIEELMKDGDKNNDGRIDYDEXLEFM 157
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 353 LKKLVLQGDIDGNGNIDFIEF----VNLMTDIYKLETPELLEKAFQYLDKNSDQFITVNE 408
L++++ + D DG+G +DF EF V M D K ++ E L F+ DKN+D +I ++E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 409 L 409
L
Sbjct: 117 L 117
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK 291
G ID+ EF ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L+ ++ + D DGNG IDF EF+ +M
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 46 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 96
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 155
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 156 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 198
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 79
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 137
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 175
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDD 200
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 68/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A K + + + + + REI + + L+ PNIV+L
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 70
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 71 LDVIHTENKLYLVFEHVDQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 128 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 156
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
+LG+G +G+ Y + S + A K + ++ +Y++ + EI + + L + NIV+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQP---LHEEIALHKHLKHK-NIVQ 69
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY---SERDAAPVLRAIVNAVNVCHSMGV 148
+ + + + ME GG L + +K +E+ + I+ + H +
Sbjct: 70 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
+HRD+K +N + + +LK++DFG++
Sbjct: 130 VHRDIKGDNVLINTY--SGVLKISDFGTS 156
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTL---REIKIL- 79
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 137
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLA 175
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
+LG+G +G+ Y + S + A K + ++ +Y++ + EI + + L + NIV+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQP---LHEEIALHKHLKHK-NIVQ 83
Query: 92 LKSAHEDETAVHVVMELCQGGDLFDRIIAKGYY---SERDAAPVLRAIVNAVNVCHSMGV 148
+ + + + ME GG L + +K +E+ + I+ + H +
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSA 177
+HRD+K +N + + +LK++DFG++
Sbjct: 144 VHRDIKGDNVLINTY--SGVLKISDFGTS 170
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
G +G G FGV Y N+T + A K +A + E +EI++ + N+
Sbjct: 30 GNKMGEGGFGVVYKGYVNNTTV--AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE-NL 86
Query: 90 VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---------RAIVNAV 140
VEL D + +V G L DR+ S D P L + N +
Sbjct: 87 VELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
N H +HRD+K N I D+ K++DFG A
Sbjct: 141 NFLHENHHIHRDIKSAN---ILLDEAFTAKISDFGLA 174
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEF 282
G ID+ EF
Sbjct: 61 GTIDFPEF 68
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L+ ++ + D DGNG IDF EF+ +M
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
G +G G FGV Y N+T + A K +A + E +EI++ + N+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTV--AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE-NL 92
Query: 90 VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---------RAIVNAV 140
VEL D + +V G L DR+ S D P L + N +
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
N H +HRD+K N I D+ K++DFG A
Sbjct: 147 NFLHENHHIHRDIKSAN---ILLDEAFTAKISDFGLA 180
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 64/157 (40%), Gaps = 21/157 (13%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
G +G G FGV Y N+T + A K +A + E +EI++ + N+
Sbjct: 36 GNKMGEGGFGVVYKGYVNNTTV--AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE-NL 92
Query: 90 VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---------RAIVNAV 140
VEL D + +V G L DR+ S D P L + N +
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRL------SCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
N H +HRD+K N I D+ K++DFG A
Sbjct: 147 NFLHENHHIHRDIKSAN---ILLDEAFTAKISDFGLA 180
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 52 PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG 111
P+ ++ AK+ A ++++ + + + ++ G N+ + + E+ V++VMEL
Sbjct: 60 PFQNQTHAKR-----AYRELVLMKVVNHKNII-GLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 112 GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV 171
++I ER + +L ++ + HS G++HRDLKP N S +A LK+
Sbjct: 114 N--LSQVIQMELDHERMSY-LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKI 167
Query: 172 TDFGSA 177
DFG A
Sbjct: 168 LDFGLA 173
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEF 282
G ID+ EF
Sbjct: 61 GTIDFPEF 68
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L+ ++ + D DGNG IDF EF+ +M
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 275 GAIDYTEF 282
G ID+ EF
Sbjct: 62 GTIDFPEF 69
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L+ ++ + D DGNG IDF EF+ +M
Sbjct: 49 LQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK 291
G ID+ EF ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L+ ++ + D DGNG IDF EF+ +M
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 28 SFGRMLGRGRFGVTYLCT-----ENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
S +++G G FG +C+ + + A K++ K+ Y E RR+
Sbjct: 48 SIDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTL----KVGYTEKQ---RRDFLGEAS 98
Query: 83 LSGQ---PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIV 137
+ GQ PNI+ L+ V +V E + G L D + K ++ +LR I
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIA 157
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
+ + MG +HRDL N + N + KV+DFG + E++
Sbjct: 158 SGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLEDD 200
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEFTAATIQRQK 291
G ID+ EF ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L+ ++ + D DGNG IDF EF+ +M
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGNG
Sbjct: 2 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 276 AIDYTEF 282
ID+ EF
Sbjct: 62 TIDFPEF 68
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L+ ++ + D DGNG IDF EF+ +M
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A + + + + + REI + + L+ PNIV+L
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 67
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 68 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 124
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 125 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 153
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 13/152 (8%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+G G +GV Y T A + + + + + REI + + L+ PNIV+L
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI--REISLLKELN-HPNIVKL 66
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA----IVNAVNVCHSMGV 148
E +++V E DL + A P++++ ++ + CHS V
Sbjct: 67 LDVIHTENKLYLVFEFLHQ-DLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
+HRDLKP+N + +K+ DFG A F
Sbjct: 124 LHRDLKPQNLLI---NTEGAIKLADFGLARAF 152
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 52 PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG 111
P+ ++ AK+ A ++++ + + + ++ G N+ + + E+ V++VMEL
Sbjct: 60 PFQNQTHAKR-----AYRELVLMKVVNHKNII-GLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 112 GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV 171
++I ER + +L ++ + HS G++HRDLKP N S +A LK+
Sbjct: 114 N--LSQVIQMELDHERMSY-LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKI 167
Query: 172 TDFGSA 177
DFG A
Sbjct: 168 LDFGLA 173
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 77
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 78 LAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 135
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 173
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 83
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 84 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 141
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 142 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 179
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 75
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 133
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 171
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSM-AKKPKMKYAENDMMIRR 75
G+PY+D Y R LG G F +L + N A K + K + AE+++ + +
Sbjct: 13 GEPYKDA--RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ 70
Query: 76 EIQ----IRRLLSGQPNIVELKSA--HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
+ + G +I++L H+ VHVVM G+ +I K Y R
Sbjct: 71 RVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YEHR-G 127
Query: 130 APVL------RAIVNAVNVCHS-MGVMHRDLKPENFC--FISRDDNAL-LKVTDFGSALL 179
P++ + ++ ++ H G++H D+KPEN + +N + +K+ D G+A
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
Query: 180 FEEE 183
++E
Sbjct: 188 YDEH 191
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 17 GKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSM-AKKPKMKYAENDMMIRR 75
G+PY+D Y R LG G F +L + N A K + K + AE+++ + +
Sbjct: 13 GEPYKDA--RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQ 70
Query: 76 EIQ----IRRLLSGQPNIVELKSA--HEDETAVHVVMELCQGGDLFDRIIAKGYYSERDA 129
+ + G +I++L H+ VHVVM G+ +I K Y R
Sbjct: 71 RVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKK--YEHR-G 127
Query: 130 APVL------RAIVNAVNVCHS-MGVMHRDLKPENFC--FISRDDNAL-LKVTDFGSALL 179
P++ + ++ ++ H G++H D+KPEN + +N + +K+ D G+A
Sbjct: 128 IPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACW 187
Query: 180 FEEE 183
++E
Sbjct: 188 YDEH 191
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 21/157 (13%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNI 89
G G G FGV Y N+T + A K +A + E +EI++ + N+
Sbjct: 27 GNKXGEGGFGVVYKGYVNNTTV--AVKKLAAMVDITTEELKQQFDQEIKVXAKCQHE-NL 83
Query: 90 VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---------RAIVNAV 140
VEL D + +V G L DR+ S D P L + N +
Sbjct: 84 VELLGFSSDGDDLCLVYVYXPNGSLLDRL------SCLDGTPPLSWHXRCKIAQGAANGI 137
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
N H +HRD+K N I D+ K++DFG A
Sbjct: 138 NFLHENHHIHRDIKSAN---ILLDEAFTAKISDFGLA 171
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-----MMI 73
P+ D + Y +G+G FG + T A K + EN+ +
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITA 64
Query: 74 RREIQIRRLLSGQPNIVEL--------KSAHEDETAVHVVMELCQG--GDLFDRIIAKGY 123
REI+I +LL + N+V L + + ++++V + C+ L ++ K
Sbjct: 65 LREIKILQLLKHE-NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
SE V++ ++N + H ++HRD+K N I+RD +LK+ DFG A F
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANV-LITRD--GVLKLADFGLARAF 175
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Query: 52 PYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQG 111
P+ ++ AK+ A ++++ + + + ++ G N+ + + E+ V++VMEL
Sbjct: 60 PFQNQTHAKR-----AYRELVLMKVVNHKNII-GLLNVFTPQKSLEEFQDVYIVMELMDA 113
Query: 112 GDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKV 171
++I ER + +L ++ + HS G++HRDLKP N S +A LK+
Sbjct: 114 N--LSQVIQMELDHERMSY-LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKI 167
Query: 172 TDFGSA 177
DFG A
Sbjct: 168 LDFGLA 173
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE 156
ED + V++V L G DL + I+ S+ ++ ++ + HS G++HRDLKP
Sbjct: 103 EDFSEVYLVTTLM-GADL-NNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPS 160
Query: 157 NFCFISRDDNALLKVTDFGSALLFEEE 183
N ++ ++++ L++ DFG A +EE
Sbjct: 161 N---VAVNEDSELRILDFGLARQADEE 184
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G GV + + + + A K + KP ++ I RE+Q+ + P IV
Sbjct: 33 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 86
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCH-SMGV 148
A + + + ME GG L D+++ K G E+ V A++ + +
Sbjct: 87 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 145
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
MHRD+KP N SR + +K+ DFG
Sbjct: 146 MHRDVKPSNILVNSRGE---IKLCDFG 169
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 75
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 76 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 133
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 134 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 171
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKV-GSMLTEFDVKQLMEAADMDGNGAIDYTE 281
+ L++ F E DT+ +G +S ELR + K+ G + D+++++ D++G+G +D+ E
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 282 FT 283
F
Sbjct: 66 FV 67
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 77
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 78 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 135
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 136 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 173
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 16/110 (14%)
Query: 75 REIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAA---- 130
RE+Q+ R PN++ +D ++ +ELC + Y ++D A
Sbjct: 66 REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAA-------TLQEYVEQKDFAHLGL 118
Query: 131 -PV--LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK--VTDFG 175
P+ L+ + + HS+ ++HRDLKP N + + +K ++DFG
Sbjct: 119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFG 168
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 80
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 138
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 176
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 26 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 81
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 82 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 139
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 140 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 177
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 17 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 72
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 73 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 130
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 131 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 168
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 79
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 137
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 175
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 73
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 131
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 169
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 79
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 137
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 175
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 80
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 81 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 138
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 139 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 176
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNIV+L D+ + ++ E D + ++ D + ++ A+
Sbjct: 82 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
+ CHS G+MHRD+KP N D+ L L++ D+G A +
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNIV+L D+ + ++ E D + ++ D + ++ A+
Sbjct: 83 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 139
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
+ CHS G+MHRD+KP N D+ L L++ D+G A +
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 178
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 73
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 74 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 131
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 132 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 169
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 95
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 96 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 153
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 154 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 191
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNIV+L D+ + ++ E D + ++ D + ++ A+
Sbjct: 82 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
+ CHS G+MHRD+KP N D+ L L++ D+G A +
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-----MMI 73
P+ D + Y +G+G FG + T A K + EN+ +
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITA 64
Query: 74 RREIQIRRLLSGQPNIVEL--------KSAHEDETAVHVVMELCQG--GDLFDRIIAKGY 123
REI+I +LL + N+V L + + ++++V + C+ L ++ K
Sbjct: 65 LREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
SE V++ ++N + H ++HRD+K N I+RD +LK+ DFG A F
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAAN-VLITRD--GVLKLADFGLARAF 175
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNIV+L D+ + ++ E D + ++ D + ++ A+
Sbjct: 83 LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 139
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
+ CHS G+MHRD+KP N D+ L L++ D+G A +
Sbjct: 140 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 178
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 15/159 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G GV + + + + A K + KP ++ I RE+Q+ + P IV
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 70
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCH-SMGV 148
A + + + ME GG L D+++ K G E+ V A++ + +
Sbjct: 71 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 129
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG-SALLFEEEGGE 186
MHRD+KP N SR + +K+ DFG S L +E E
Sbjct: 130 MHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDEMANE 165
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNIV+L D+ + ++ E D + ++ D + ++ A+
Sbjct: 82 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
+ CHS G+MHRD+KP N D+ L L++ D+G A +
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +G ++ EL + +G TE +++ ++ D DGN
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEF 282
G ID+ EF
Sbjct: 61 GTIDFPEF 68
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L+ ++ + D DGNG IDF EF+NLM
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLNLM 72
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G GV + + + + A K + KP ++ I RE+Q+ + P IV
Sbjct: 41 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 94
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCH-SMGV 148
A + + + ME GG L D+++ K G E+ V A++ + +
Sbjct: 95 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 153
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
MHRD+KP N SR + +K+ DFG
Sbjct: 154 MHRDVKPSNILVNSRGE---IKLCDFG 177
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSY-LLYQMLCGIKHLH 143
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S +A LK+ DFG A
Sbjct: 144 SAGIIHRDLKPSNIVVKS---DATLKILDFGLA 173
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNIV+L D+ + ++ E D + ++ D + ++ A+
Sbjct: 82 LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
+ CHS G+MHRD+KP N D+ L L++ D+G A +
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNIV+L D+ + ++ E D + ++ D + ++ A+
Sbjct: 84 LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 140
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
+ CHS G+MHRD+KP N D+ L L++ D+G A +
Sbjct: 141 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 179
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNIV+L D+ + ++ E D + ++ D + ++ A+
Sbjct: 103 LXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 159
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
+ CHS G+MHRD+KP N D+ L L++ D+G A +
Sbjct: 160 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 198
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-----MMI 73
P+ D + Y +G+G FG + T A K + EN+ +
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITA 64
Query: 74 RREIQIRRLLSGQPNIVEL--------KSAHEDETAVHVVMELCQG--GDLFDRIIAKGY 123
REI+I +LL + N+V L + + ++++V + C+ L ++ K
Sbjct: 65 LREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 123
Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
SE V++ ++N + H ++HRD+K N I+RD +LK+ DFG A F
Sbjct: 124 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANV-LITRD--GVLKLADFGLARAF 175
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNIV+L D+ + ++ E D + ++ D + ++ A+
Sbjct: 82 LCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
+ CHS G+MHRD+KP N D+ L L++ D+G A +
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 28/177 (15%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAEND-----MMI 73
P+ D + Y +G+G FG + T A K + EN+ +
Sbjct: 11 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKV-------LMENEKEGFPITA 63
Query: 74 RREIQIRRLLSGQPNIVEL--------KSAHEDETAVHVVMELCQG--GDLFDRIIAKGY 123
REI+I +LL + N+V L + + ++++V + C+ L ++ K
Sbjct: 64 LREIKILQLLKHE-NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFT 122
Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
SE V++ ++N + H ++HRD+K N I+RD +LK+ DFG A F
Sbjct: 123 LSE--IKRVMQMLLNGLYYIHRNKILHRDMKAANV-LITRD--GVLKLADFGLARAF 174
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDY 279
G+ + L + F D + +G + DEL+ L G +TE D+++LM+ D + +G IDY
Sbjct: 2 GKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDY 61
Query: 280 TEF 282
EF
Sbjct: 62 DEF 64
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 11/103 (10%)
Query: 83 LSGQPNIVELKSAHEDETA--VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAV 140
L G PNIV+L D+ + ++ E D + ++ D + ++ A+
Sbjct: 82 LMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDF---KVLYPTLTDYDIRYYIYELLKAL 138
Query: 141 NVCHSMGVMHRDLKPENFCFISRDDNAL--LKVTDFGSALLFE 181
+ CHS G+MHRD+KP N D+ L L++ D+G A +
Sbjct: 139 DYCHSQGIMHRDVKPHNVMI----DHELRKLRLIDWGLAEFYH 177
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
++ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DGN
Sbjct: 1 MDQLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGN 60
Query: 275 GAIDYTEF 282
G ID+ EF
Sbjct: 61 GTIDFPEF 68
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK 382
L+ ++ + D DGNG IDF EF+ +M I K
Sbjct: 48 LQDMINEVDADGNGTIDFPEFLTMMARIMK 77
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A K ++ Y + + REI+I
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTL---REIKIL- 79
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKCQHLSNDHICYFLYQI 137
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 175
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR---RE 76
++ +M Y +G G +GV Y ++ + +A K AE++ + RE
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI------VALKRIRLDAEDEGIPSTAIRE 69
Query: 77 IQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAP--VLR 134
I + + L PNIV L E + +V E + +++ + +D+ L
Sbjct: 70 ISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLY 126
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
++ V CH ++HRDLKP+N + + LK+ DFG A F
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAF 169
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G GV + + + + A K + KP ++ I RE+Q+ + P IV
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 67
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHS-MGV 148
A + + + ME GG L D+++ K G E+ V A++ + +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
MHRD+KP N SR + +K+ DFG
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFG 150
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G GV + + + + A K + KP ++ I RE+Q+ + P IV
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 67
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHS-MGV 148
A + + + ME GG L D+++ K G E+ V A++ + +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
MHRD+KP N SR + +K+ DFG
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFG 150
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 233 MDTDKNGTLSYDELRAGLTKVGS-MLTEFDVKQLMEAADMDGNGAIDYTEF 282
D + +G + +DE + + KVG LT+ +V++ M+ AD DGNG ID EF
Sbjct: 17 FDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G GV + + + + A K + KP ++ I RE+Q+ + P IV
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 67
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCHS-MGV 148
A + + + ME GG L D+++ K G E+ V A++ + +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
MHRD+KP N SR + +K+ DFG
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFG 150
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 73/166 (43%), Gaps = 17/166 (10%)
Query: 20 YEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR---RE 76
++ +M Y +G G +GV Y ++ + +A K AE++ + RE
Sbjct: 16 FQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRI------VALKRIRLDAEDEGIPSTAIRE 69
Query: 77 IQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAP--VLR 134
I + + L PNIV L E + +V E + +++ + +D+ L
Sbjct: 70 ISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLY 126
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
++ V CH ++HRDLKP+N + + LK+ DFG A F
Sbjct: 127 QLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAF 169
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G GV + + + + A K + KP ++ I RE+Q+ + P IV
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 67
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCH-SMGV 148
A + + + ME GG L D+++ K G E+ V A++ + +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
MHRD+KP N SR + +K+ DFG
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFG 150
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 223 TQALKEKFIE----MDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAID 278
T+A E F++ D + G +S +LR LT +G LT+ +V +L++ ++D NG ID
Sbjct: 78 TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEID 137
Query: 279 YTEF 282
Y +F
Sbjct: 138 YKKF 141
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G GV + + + + A K + KP ++ I RE+Q+ + P IV
Sbjct: 76 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 129
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCH-SMGV 148
A + + + ME GG L D+++ K G E+ V A++ + +
Sbjct: 130 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 188
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
MHRD+KP N SR + +K+ DFG
Sbjct: 189 MHRDVKPSNILVNSRGE---IKLCDFG 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 14/161 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y+ +G G +G+ +N + A + ++ Y + + REI+I
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTL---REIKIL- 79
Query: 82 LLSGQPNIVELKSAHEDETA-----VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAI 136
L NI+ + T V++V +L + DL+ +++ + S L I
Sbjct: 80 LRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLY-KLLKTQHLSNDHICYFLYQI 137
Query: 137 VNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + HS V+HRDLKP N + D LK+ DFG A
Sbjct: 138 LRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLA 175
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
++LG G G T + + P A K M + + + +M EI++ PN++
Sbjct: 39 KILGYGSSG-TVVFQGSFQGRPVAVKRML----IDFCDIALM---EIKLLTESDDHPNVI 90
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSE-----RDAAPV--LRAIVNAVNVC 143
+ + +++ +ELC +L D + +K E ++ P+ LR I + V
Sbjct: 91 RYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 144 HSMGVMHRDLKPENFCFISRD----------DNALLKVTDFG 175
HS+ ++HRDLKP+N + +N + ++DFG
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 5/87 (5%)
Query: 97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE 156
ED + V++V L G DL + I+ S+ ++ ++ + HS G++HRDLKP
Sbjct: 103 EDFSEVYLVTTLM-GADL-NNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPS 160
Query: 157 NFCFISRDDNALLKVTDFGSALLFEEE 183
N ++ ++++ L++ DFG A +EE
Sbjct: 161 N---VAVNEDSELRILDFGLARQADEE 184
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
++LG G G T + + P A K M + + + +M EI++ PN++
Sbjct: 21 KILGYGSSG-TVVFQGSFQGRPVAVKRML----IDFCDIALM---EIKLLTESDDHPNVI 72
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSE-----RDAAPV--LRAIVNAVNVC 143
+ + +++ +ELC +L D + +K E ++ P+ LR I + V
Sbjct: 73 RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 144 HSMGVMHRDLKPENFCFISRD----------DNALLKVTDFG 175
HS+ ++HRDLKP+N + +N + ++DFG
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
++LG G G T + + P A K M + + + +M EI++ PN++
Sbjct: 39 KILGYGSSG-TVVFQGSFQGRPVAVKRML----IDFCDIALM---EIKLLTESDDHPNVI 90
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSE-----RDAAPV--LRAIVNAVNVC 143
+ + +++ +ELC +L D + +K E ++ P+ LR I + V
Sbjct: 91 RYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 144 HSMGVMHRDLKPENFCFISRD----------DNALLKVTDFG 175
HS+ ++HRDLKP+N + +N + ++DFG
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 21/162 (12%)
Query: 29 FGRMLGRGRFGVTY---LCTENSTNMPYACKSMA---KKPKMKYAENDMMIRREIQIRRL 82
+ + +G+G FG+ + L + S A KS+ + + + E +RE+ I
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSV---VAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
L+ PNIV+L + +VME GDL+ R++ K + + LR +++
Sbjct: 80 LN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALG 134
Query: 143 CHSM-----GVMHRDLKPENFCFISRDDNALL--KVTDFGSA 177
M ++HRDL+ N S D+NA + KV DFG++
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS 176
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 14/148 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKY---AENDMMIRREIQIRRLLSGQPNI 89
+G G F YL T P +K +K+ + + I E+Q + GQ N+
Sbjct: 29 IGEGTFSSVYLATAQLQVGP------EEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNV 82
Query: 90 VELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVM 149
+ +K V + M + D + + + R+ + + A+ H G++
Sbjct: 83 MGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVRE---YMLNLFKALKRIHQFGIV 139
Query: 150 HRDLKPENFCFISRDDNALLKVTDFGSA 177
HRD+KP NF + R L DFG A
Sbjct: 140 HRDVKPSNFLYNRRLKKYAL--VDFGLA 165
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA--ATI 287
F E+D + +G +SY+E++A ++K ++ E ++ + ++ D DGNG ID EF +I
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 288 QRQKL 292
Q Q L
Sbjct: 66 QGQDL 70
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 265 LMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDEFRAMVES 321
L + D++G+GA+ Y E A +++ ++ + L F+ D D +G +EF S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 322 PQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY 381
Q + DK + +L KL+ D+DG+G + E +T +
Sbjct: 65 IQG----QDLSDDKI------------GLKVLYKLM---DVDGDGKLTKEE----VTSFF 101
Query: 382 KLETPELLEKAFQYLDKNSDQFITVNEL 409
K E + + D N D +IT+ E
Sbjct: 102 KKHGIEKVAEQVMKADANGDGYITLEEF 129
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 26/162 (16%)
Query: 31 RMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
++LG G G T + + P A K M + + + +M EI++ PN++
Sbjct: 21 KILGYGSSG-TVVFQGSFQGRPVAVKRML----IDFCDIALM---EIKLLTESDDHPNVI 72
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSE-----RDAAPV--LRAIVNAVNVC 143
+ + +++ +ELC +L D + +K E ++ P+ LR I + V
Sbjct: 73 RYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 144 HSMGVMHRDLKPENFCFISRD----------DNALLKVTDFG 175
HS+ ++HRDLKP+N + +N + ++DFG
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G GV + + + + A K + KP ++ I RE+Q+ + P IV
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 67
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAK-GYYSERDAAPVLRAIVNAVNVCH-SMGV 148
A + + + ME GG L D+++ K G E+ V A++ + +
Sbjct: 68 GFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKI 126
Query: 149 MHRDLKPENFCFISRDDNALLKVTDFG 175
MHRD+KP N SR + +K+ DFG
Sbjct: 127 MHRDVKPSNILVNSRGE---IKLCDFG 150
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
+ K F + D +K+G LS DE R T+ D+ + E D+DGNG ++ EFT+
Sbjct: 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Query: 285 A 285
Sbjct: 62 C 62
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 261 DVKQLMEAADMDGNGAIDYTEFTAATIQRQK-LERSEYLSKAFQYFDKDNSGY 312
+++ ++ D DGNG ID+ EF ++ K + E + +AF+ FDKD +GY
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGY 54
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLMTDIYK-LETPELLEKAFQYLDKNSDQFITVNEL 409
L+ ++ + D DGNG IDF EF+ +M K ++ E + +AF+ DK+ + +I+ EL
Sbjct: 3 LQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA--ATI 287
F E+D + +G +SY+E++A ++K ++ E ++ + ++ D DGNG ID EF +I
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSI 65
Query: 288 QRQKL 292
Q Q L
Sbjct: 66 QGQDL 70
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 265 LMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDEFRAMVES 321
L + D++G+GA+ Y E A +++ ++ + L F+ D D +G +EF S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 322 PQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY 381
Q + DK + +L KL+ D+DG+G + E +T +
Sbjct: 65 IQG----QDLSDDKI------------GLKVLYKLM---DVDGDGKLTKEE----VTSFF 101
Query: 382 KLETPELLEKAFQYLDKNSDQFITVNEL 409
K E + + D N D +IT+ E
Sbjct: 102 KKHGIEKVAEQVMKADANGDGYITLEEF 129
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 100 TAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFC 159
+ + ++ME GG D ++ G + E A +L+ I+ ++ HS +HRD+K N
Sbjct: 94 SKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVL 152
Query: 160 FISRDDNALLKVTDFGSA 177
+ D +K+ DFG A
Sbjct: 153 LSEQGD---VKLADFGVA 167
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 81/179 (45%), Gaps = 29/179 (16%)
Query: 199 QFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT 258
Q +RMS +LT E+ Q ++E F D D GT+ EL+ +G
Sbjct: 15 QRKRMSPKPELTE---------EQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPK 65
Query: 259 EFDVKQLMEAADMDGNGAIDYTEF-TAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRA 317
+ ++K+ + D +G G ++ +F T T + + + E + KAF+ FD D +G F
Sbjct: 66 KEEIKKXISEIDKEGTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISF-- 123
Query: 318 MVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNL 376
+N+ + AK+ G T + L++ + + D DG+G + EF+ +
Sbjct: 124 --------KNLKRV----AKELGENLTDE-----ELQEXIDEADRDGDGEVSEQEFLRI 165
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+ L E+ KE F D D +GT++ EL + +G TE +++ ++ D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 275 GAIDYTEFTAATIQRQK 291
G ID+ EF ++ K
Sbjct: 61 GTIDFPEFLTMMARKMK 77
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L+ ++ + D DG+G IDF EF+ +M
Sbjct: 48 LQDMINEVDADGDGTIDFPEFLTMM 72
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 97 EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPE 156
ED + V++V L G DL + I+ S+ ++ ++ + HS G++HRDLKP
Sbjct: 95 EDFSEVYLVTTL-MGADL-NNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPS 152
Query: 157 NFCFISRDDNALLKVTDFGSALLFEEE 183
N ++ +++ L++ DFG A +EE
Sbjct: 153 N---VAVNEDCELRILDFGLARQADEE 176
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGNGAIDYTEF 282
+K+ F +D D++G L DEL+ L K S LTE + K LM+AAD DG+G I EF
Sbjct: 43 VKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEF 102
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 223 TQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
T+ + F D + G +S +LR LT +G LT+ +V +L++ ++D NG IDY +F
Sbjct: 4 TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 63
Query: 283 TAATIQR 289
+++
Sbjct: 64 IEDVLRQ 70
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAI 277
+ G+ + L + F D + +G + +EL+ L G +TE D+++LM+ D + +G I
Sbjct: 1 MKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 60
Query: 278 DYTEF 282
DY EF
Sbjct: 61 DYDEF 65
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 16/152 (10%)
Query: 32 MLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVE 91
++G G +G Y T A K M + + I++EI + + S NI
Sbjct: 31 LVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----GDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 92 L------KSAHEDETAVHVVMELCQGGDLFDRII-AKG-YYSERDAAPVLRAIVNAVNVC 143
K+ + + +VME C G + D I KG E A + R I+ ++
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
H V+HRD+K +N +NA +K+ DFG
Sbjct: 146 HQHKVIHRDIKGQNVLLT---ENAEVKLVDFG 174
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLLSG--QPN 88
+G G +G Y + + A KS+ ++ E + I RE+ + R L PN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 89 IVEL-----KSAHEDETAVHVVMELCQGGDL---FDRIIAKGYYSE--RDAAPVLRAIVN 138
+V L S + E V +V E DL D+ G +E +D ++R +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD---LMRQFLR 123
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
++ H+ ++HRDLKPEN S +K+ DFG A ++
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIY 162
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G+FG Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 70
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSM 146
+L E +++ E G+L D + + + +A VL I +A+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 129 NFIHRDLAARN-CLVG--ENHLVKVADFGLSRL 158
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 4 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 64 QTHAKRAYRELVLMKXVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQ 120
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 121 MELDHERMSY-LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLA 173
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLLSG--QPN 88
+G G +G Y + + A KS+ ++ E + I RE+ + R L PN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 89 IVEL-----KSAHEDETAVHVVMELCQGGDL---FDRIIAKGYYSE--RDAAPVLRAIVN 138
+V L S + E V +V E DL D+ G +E +D ++R +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD---LMRQFLR 123
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
++ H+ ++HRDLKPEN S +K+ DFG A ++
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIY 162
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 25/162 (15%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLLSG--QPN 88
+G G +G Y + + A KS+ ++ E + I RE+ + R L PN
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSV----RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 89 IVEL-----KSAHEDETAVHVVMELCQGGDL---FDRIIAKGYYSE--RDAAPVLRAIVN 138
+V L S + E V +V E DL D+ G +E +D ++R +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD---LMRQFLR 123
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
++ H+ ++HRDLKPEN S +K+ DFG A ++
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIY 162
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 94 SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERD---AAPVLRAIVNAVNVCHSMGVMH 150
S+ + + ME C G L ++ I K + D A + I V+ HS ++H
Sbjct: 101 SSRSKTKCLFIQMEFCDKGTL-EQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIH 159
Query: 151 RDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
RDLKP N + D +K+ DFG + +G
Sbjct: 160 RDLKPSNIFLV---DTKQVKIGDFGLVTSLKNDG 190
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
F E+D + +G +SY+E++A ++K ++ E ++ + ++ D DGNG ID EF
Sbjct: 6 FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 265 LMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
L + D++G+GA+ Y E A +++ ++ + L F+ D D +G
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNG 51
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 73
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E ++++E G+L D + + E +A +L I +A+
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 132
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 133 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 161
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMELDHERMSY-LLYQMLCGIKHLH 143
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S + LK+ DFG A
Sbjct: 144 SAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 173
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 211 VKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
V+ + + G+ + L + F D + +G + +EL+ L G +TE D+++LM+ D
Sbjct: 2 VRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGD 61
Query: 271 MDGNGAIDYTEF 282
+ +G IDY EF
Sbjct: 62 KNNDGRIDYDEF 73
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 72
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSM 146
+L E ++++E G+L D + + + +A VL I +A+
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 131 NFIHRDLAARN-CLVG--ENHLVKVADFGLSRL 160
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 221 EETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYT 280
EE + L+E F E D DK+G ++ +L + +G M TE ++ +L + +M+ G +D+
Sbjct: 7 EEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFD 66
Query: 281 EFT 283
+F
Sbjct: 67 DFV 69
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 19/85 (22%)
Query: 293 ERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNM 352
E E L +AF+ FDKD GY R + +R + ++ T+
Sbjct: 7 EEIEELREAFREFDKDKDGYINCRDL---GNCMRTMGYMPTEME---------------- 47
Query: 353 LKKLVLQGDIDGNGNIDFIEFVNLM 377
L +L Q +++ G++DF +FV LM
Sbjct: 48 LIELSQQINMNLGGHVDFDDFVELM 72
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 21/160 (13%)
Query: 29 FGRMLGRGRFGVTY---LCTENSTNMPYACKSMA---KKPKMKYAENDMMIRREIQIRRL 82
+ + +G+G FG+ + L + S A KS+ + + + E +RE+ I
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSV---VAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
L+ PNIV+L + +VME GDL+ R++ K + + LR +++
Sbjct: 80 LN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALG 134
Query: 143 CHSM-----GVMHRDLKPENFCFISRDDNALL--KVTDFG 175
M ++HRDL+ N S D+NA + KV DFG
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 71/162 (43%), Gaps = 22/162 (13%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIR--REIQIRRLLSG--QPN 88
+G G +G Y + + A KS+ + P + I RE+ + R L PN
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSV-RVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 89 IVEL-----KSAHEDETAVHVVMELCQGGDL---FDRIIAKGYYSE--RDAAPVLRAIVN 138
+V L S + E V +V E DL D+ G +E +D ++R +
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKD---LMRQFLR 131
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
++ H+ ++HRDLKPEN S +K+ DFG A ++
Sbjct: 132 GLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIY 170
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 77
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E ++++E G+L D + + E +A +L I +A+
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 137 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 165
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 72
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSM 146
+L E ++++E G+L D + + + +A VL I +A+
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 131 NFIHRDLAARN-CLVG--ENHLVKVADFGLSRL 160
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 85
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 144
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 145 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 173
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 19/153 (12%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 70
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSM 146
+L E ++++E G+L D + + + +A VL I +A+
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 129 NFIHRDLAARN-CLVG--ENHLVKVADFGLSRL 158
>pdb|3SIB|A Chain A, Crystal Structure Of Ure3-Binding Protein, Wild-Type
Length = 220
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
++ +P ++ + + F+ +D D++GTL +EL G G L+ ++M D D
Sbjct: 41 LLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDF 100
Query: 274 NGAIDYTEFTA 284
NG I + EF A
Sbjct: 101 NGHISFYEFMA 111
>pdb|3SJS|A Chain A, Crystal Structure Of Ure3-Binding Protein From Entamoeba
Histolytica, (D127a,N129a) Mutant, Native Form
pdb|3SIA|A Chain A, Crystal Structure Of Ure3-Binding Protein, (D127a,N129a)
Mutant, Iodide Phased
Length = 220
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 214 IVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDG 273
++ +P ++ + + F+ +D D++GTL +EL G G L+ ++M D D
Sbjct: 41 LLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDF 100
Query: 274 NGAIDYTEFTA 284
NG I + EF A
Sbjct: 101 NGHISFYEFMA 111
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 30 GRMLGRGRFGVTYLCTENSTNMP--YACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQP 87
G +GRG +G Y YA K +++ M REI + R L P
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALK------QIEGTGISMSACREIALLRELK-HP 78
Query: 88 NIVELKS---AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPV----------LR 134
N++ L+ +H D V ++ + + DL+ II S+ + PV L
Sbjct: 79 NVISLQKVFLSHADRK-VWLLFDYAEH-DLW-HIIKFHRASKANKKPVQLPRGMVKSLLY 135
Query: 135 AIVNAVNVCHSMGVMHRDLKPENFCFISR-DDNALLKVTDFGSALLFEEEGGEASDDTSV 193
I++ ++ H+ V+HRDLKP N + + +K+ D G A LF +D V
Sbjct: 136 QILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPV 195
Query: 194 IL 195
++
Sbjct: 196 VV 197
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 4 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 64 QTHAKRAYRELVLMKXVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQ 120
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 121 MELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLA 173
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 118 IIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++ +G E A + ++ + HS V+HRDLKP N FI+ +D +LK+ DFG A
Sbjct: 111 VLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANL-FINTED-LVLKIGDFGLA 168
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 73
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 132
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 133 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 161
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 74
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 134 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 162
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 74
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 134 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 162
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 77
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 137 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 165
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 68/160 (42%), Gaps = 13/160 (8%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 15 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 71
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + A + + + + R ++ H+
Sbjct: 72 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
++HRDLK N F+ D+ +K+ DFG A + G
Sbjct: 127 KSIIHRDLKSNNI-FLHEDNT--VKIGDFGLATVKSRWSG 163
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 83
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + A + + + + R ++ H+
Sbjct: 84 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLK N F+ D+ +K+ DFG A
Sbjct: 139 KSIIHRDLKSNNI-FLHEDNT--VKIGDFGLA 167
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 74
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 133
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 134 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 162
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 26/170 (15%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTY---LCTENSTNMPYACKSMAKKPKMKYAENDMMIRR 75
P+E V+ H R++G+G FGV Y + + A KS+++ +M+ E +R
Sbjct: 17 PHERVVTHSD--RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA--FLRE 72
Query: 76 EIQIRRLLSGQPNIVELKSAH-EDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLR 134
+ +R L PN++ L E HV++ GDL I + +R+ P ++
Sbjct: 73 GLLMRGL--NHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS----PQRN--PTVK 124
Query: 135 AIVN-AVNVCHSMGVM------HRDLKPENFCFISRDDNALLKVTDFGSA 177
+++ + V M + HRDL N C + D++ +KV DFG A
Sbjct: 125 DLISFGLQVARGMEYLAEQKFVHRDLAARN-CML--DESFTVKVADFGLA 171
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 219 PGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAID 278
G+ + L + F D + +G + +EL+ L G +TE D+++LM+ D + +G ID
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 279 YTEF 282
Y EF
Sbjct: 65 YDEF 68
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 70
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSM 146
+L E +++ E G+L D + + + +A VL I +A+
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 129 NFIHRDLAARN-CLVG--ENHLVKVADFGLSRL 158
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 72
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSM 146
+L E +++ E G+L D + + + +A VL I +A+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 131 NFIHRDLAARN-CLVG--ENHLVKVADFGLSRL 160
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 60/165 (36%), Gaps = 19/165 (11%)
Query: 29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLLSGQ 86
FG+ LG G FG T A +A K +A+ + E++I L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI--------------IAKGYYSERDAAPV 132
NIV L A V V+ E C GDL + + IA S RD
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHF 169
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + S +HRD+ N + + + K+ DFG A
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA 211
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVC 143
PNI+ L+ V ++ E + G L D + K G ++ +LR I + +
Sbjct: 89 HPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 147
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
M +HRDL N I + N + KV+DFG + + E++
Sbjct: 148 SDMSAVHRDLAARN---ILVNSNLVCKVSDFGMSRVLEDD 184
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 72
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 131
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 132 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 160
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 72
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 131
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 132 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 160
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 76
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 135
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 136 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 164
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y +G G +GV T A K + N RE++I +
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA--FDVVTNAKRTLRELKILK 108
Query: 82 LLSGQPNIVELKS------AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
NI+ +K + + +V+VV++L + DL I + + L
Sbjct: 109 HFKHD-NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQ 166
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++ + HS V+HRDLKP N ++N LK+ DFG A
Sbjct: 167 LLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMA 205
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 77
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 137 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 165
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 77
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 136
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 137 FIHRDLAARN-CLVG--ENHLVKVADFGLSRL 165
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 39.3 bits (90), Expect = 0.005, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGN 274
L + +K+ F +D DK+G + DEL+ L + LT+ + K ++A D DG+
Sbjct: 36 LTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGD 95
Query: 275 GAIDYTEFTA 284
GAI E+ A
Sbjct: 96 GAIGVDEWAA 105
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 4 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQ 120
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 121 MELDHERMSY-LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLA 173
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y+ ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 91
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSM 146
+L E ++V E G+L D + + E A VL I +A+
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYL--RECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N ++KV DFG + L
Sbjct: 150 NFIHRDLAARN-CLVG--ENHVVKVADFGLSRL 179
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 72
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSM 146
+L E +++ E G+L D + + + +A VL I +A+
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 131 NFIHRDLAARN-CLVG--ENHLVKVADFGLSRL 160
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 25/164 (15%)
Query: 222 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTE 281
+ Q KE F +D DK+G +S +++RA +G + TE ++ ++ A G I++T
Sbjct: 55 QVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTM 110
Query: 282 FTAATIQR-QKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG 340
F R + + + AF FD+ + E + T +KF
Sbjct: 111 FLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKE-----------ETLKRSLTTWGEKF- 158
Query: 341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIYKLE 384
+ + + + + + IDGNG ID +F ++T K E
Sbjct: 159 --------SQDEVDQALSEAPIDGNGLIDIKKFAQILTKGAKEE 194
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 77
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSM 146
+L E +++ E G+L D + + + +A VL I +A+
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HRDL N C + +N L+KV DFG + L
Sbjct: 136 NFIHRDLAARN-CLVG--ENHLVKVADFGLSRL 165
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 19/169 (11%)
Query: 31 RMLGRGRFG-VTY--LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ- 86
+++G G G V Y L ++P A K++ K Y E RR+ + GQ
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL----KAGYTERQ---RRDFLSEASIMGQF 107
Query: 87 --PNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
PNI+ L+ +V E + G D F R G ++ +LR + +
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRY 166
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
+G +HRDL N D N + KV+DFG + + E++ A T
Sbjct: 167 LSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAXTTT 212
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
N+ + E+ V++VMEL ++I ER + +L ++ + HS G
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMELDHERMSY-LLYQMLXGIKHLHSAG 139
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLKP N S + LK+ DFG A
Sbjct: 140 IIHRDLKPSNIVVKS---DXTLKILDFGLA 166
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLH 143
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S + LK+ DFG A
Sbjct: 144 SAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 173
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLH 143
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S + LK+ DFG A
Sbjct: 144 SAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 173
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 27 YSFGRMLGRGRFGVTYLCT-ENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRR 81
Y+ R + G +G +C +S +P A K +++ + + + +R ++ R
Sbjct: 24 YTVQRFISSGSYGA--VCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 82 LLSG--QPNIVELKS--AHEDETAVH---VVMELCQGGDLFDRII-AKGYYSERDAAPVL 133
LL+ PNI+ L+ H +E A+H +V EL + DL I + S + +
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFM 140
Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
I+ ++V H GV+HRDL P N +D + + DF A E+ +A+ V
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLA---REDTADANKTHYV 194
Query: 194 ILR-------MKQFRRMSKL 206
R + QF+ +KL
Sbjct: 195 THRWYRAPELVMQFKGFTKL 214
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLH 143
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S + LK+ DFG A
Sbjct: 144 SAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 173
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 4 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 64 QTHAKRAYRELVLMKXVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ 120
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 121 MELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLA 173
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 88 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLH 144
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S + LK+ DFG A
Sbjct: 145 SAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 174
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLH 143
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S + LK+ DFG A
Sbjct: 144 SAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 173
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+ L+ F D D +G ++ DELR + +G L + ++ ++ AD+D +G ++Y EF
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 284 AATIQ 288
Q
Sbjct: 66 RMLAQ 70
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 29/200 (14%)
Query: 27 YSFGRMLGRGRFGVTYLCT-ENSTNMPYACK----SMAKKPKMKYAENDMMIRREIQIRR 81
Y+ R + G +G +C +S +P A K +++ + + + +R ++ R
Sbjct: 24 YTVQRFISSGSYGA--VCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIR 81
Query: 82 LLSG--QPNIVELKS--AHEDETAVH---VVMELCQGGDLFDRII-AKGYYSERDAAPVL 133
LL+ PNI+ L+ H +E A+H +V EL + DL I + S + +
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFM 140
Query: 134 RAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSV 193
I+ ++V H GV+HRDL P N +D + + DF A E+ +A+ V
Sbjct: 141 YHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLA---REDTADANKTHYV 194
Query: 194 ILR-------MKQFRRMSKL 206
R + QF+ +KL
Sbjct: 195 THRWYRAPELVMQFKGFTKL 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVC 143
PNI+ L+ V ++ E + G L D + K G ++ +LR I + +
Sbjct: 68 HPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
M +HRDL N I + N + KV+DFG + + E++
Sbjct: 127 SDMSYVHRDLAARN---ILVNSNLVCKVSDFGMSRVLEDD 163
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 60/165 (36%), Gaps = 19/165 (11%)
Query: 29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLLSGQ 86
FG+ LG G FG T A +A K +A+ + E++I L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI--------------IAKGYYSERDAAPV 132
NIV L A V V+ E C GDL + + IA S RD
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHF 169
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + S +HRD+ N + + + K+ DFG A
Sbjct: 170 SSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA 211
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 92 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLH 148
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S + LK+ DFG A
Sbjct: 149 SAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 178
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 81 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLH 137
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S + LK+ DFG A
Sbjct: 138 SAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 167
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVNVC 143
PNI+ L+ V ++ E + G L D + K G ++ +LR I + +
Sbjct: 74 HPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
M +HRDL N I + N + KV+DFG + + E++
Sbjct: 133 SDMSYVHRDLAARN---ILVNSNLVCKVSDFGMSRVLEDD 169
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 89 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLH 145
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S + LK+ DFG A
Sbjct: 146 SAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 175
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+ L + F D + +G + +EL+ L G +TE D+++LM+ D + +G IDY EF
Sbjct: 5 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G N+ + + E+ V++VMEL ++I ER + +L ++ + H
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLH 143
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S G++HRDLKP N S + LK+ DFG A
Sbjct: 144 SAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 173
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 13/152 (8%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 27 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 83
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA-KGYYSERDAAPVLRAIVNAVNVCHS 145
L + + +V + C+G L+ + A + + + + R ++ H+
Sbjct: 84 -----LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLK N F+ D+ +K+ DFG A
Sbjct: 139 KSIIHRDLKSNNI-FLHEDNT--VKIGDFGLA 167
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
++ A++ CHS G+MHRD+KP N + L++ D+G A +
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYH 189
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFE 181
++ A++ CHS G+MHRD+KP N + L++ D+G A +
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYH 184
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
Query: 22 DVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRR 81
DV Y +G G +GV T A K + N RE++I +
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA--FDVVTNAKRTLRELKILK 109
Query: 82 LLSGQPNIVELKS------AHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA 135
NI+ +K + + +V+VV++L + DL I + + L
Sbjct: 110 HFKHD-NIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQ 167
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++ + HS V+HRDLKP N ++N LK+ DFG A
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLV---NENCELKIGDFGMA 206
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGN 274
L + +K+ F +D DK+G + DEL+ L + LT+ + K ++A D DG+
Sbjct: 36 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 95
Query: 275 GAIDYTEFTA 284
G I EFTA
Sbjct: 96 GKIGVDEFTA 105
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+SE ++ ++ + HS GV+HRDLKP N ++ +++ LK+ DFG A
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGLA 173
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 124 YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+SE ++ ++ + HS GV+HRDLKP N ++ +++ LK+ DFG A
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN---LAVNEDCELKILDFGLA 191
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 3/98 (3%)
Query: 86 QPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHS 145
+P++V + E + ++V L G DL + +G + A ++R I +A++ H+
Sbjct: 93 EPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHA 152
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEE 183
G HRD+KPEN +S DD A L DFG A +E
Sbjct: 153 AGATHRDVKPENI-LVSADDFAYL--VDFGIASATTDE 187
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
Q L+E F D + NG +S D +R L ++ L+ D+ +++ D DG+G +D+ EF
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 19/81 (23%)
Query: 298 LSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLV 357
L +AF+ +DK+ +GY I TD ++ L + + L ++
Sbjct: 5 LREAFRLYDKEGNGY------------------ISTDVMREI-LAELDETLSSEDLDAMI 45
Query: 358 LQGDIDGNGNIDFIEFVNLMT 378
+ D DG+G +DF EF+ +MT
Sbjct: 46 DEIDADGSGTVDFEEFMGVMT 66
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 19/169 (11%)
Query: 31 RMLGRGRFG-VTY--LCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQ- 86
+++G G G V Y L ++P A K++ K Y E RR+ + GQ
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKAL----KAGYTERQ---RRDFLSEASIMGQF 107
Query: 87 --PNIVELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
PNI+ L+ +V E + G D F R G ++ +LR + +
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRT-HDGQFTIMQLVGMLRGVGAGMRY 166
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDT 191
+G +HRDL N D N + KV+DFG + + E++ A T
Sbjct: 167 LSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAYTTT 212
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGNGAIDYTEF 282
+K+ F +D D++G L +EL+ L K S LTE + K LM AAD DG+G I EF
Sbjct: 44 VKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEF 103
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERD---AAPVLRAIVNAVNVC 143
P S+ + + ME C G L ++ I K + D A + I V+
Sbjct: 80 PETSSKNSSRSKTKCLFIQMEFCDKGTL-EQWIEKRRGEKLDKVLALELFEQITKGVDYI 138
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEG 184
HS +++RDLKP N + D +K+ DFG + +G
Sbjct: 139 HSKKLINRDLKPSNIFLV---DTKQVKIGDFGLVTSLKNDG 176
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 133 LRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
L ++ + CH V+HRDLKP+N R + LK+ DFG A
Sbjct: 106 LFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE---LKLADFGLA 147
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGNGAIDYTEF 282
LKE F +D D++G + DEL+ L + S +LT + K + AAD DG+G I EF
Sbjct: 43 LKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEF 102
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK----KPKMKYAENDMMIRREIQ 78
V+ Y + +G G G+ + + A K +++ + K A ++++ + +
Sbjct: 22 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 81
Query: 79 IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
+ ++S N+ + E+ V++VMEL ++I ER + +L ++
Sbjct: 82 HKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSY-LLYQMLC 137
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ HS G++HRDLKP N I + LK+ DFG A
Sbjct: 138 GIKHLHSAGIIHRDLKPSN---IVVKSDCTLKILDFGLA 173
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 23 VMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK----KPKMKYAENDMMIRREIQ 78
V+ Y + +G G G+ + + A K +++ + K A ++++ + +
Sbjct: 20 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN 79
Query: 79 IRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVN 138
+ ++S N+ + E+ V++VMEL ++I ER + +L ++
Sbjct: 80 HKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIHMELDHERMSY-LLYQMLC 135
Query: 139 AVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ HS G++HRDLKP N S + LK+ DFG A
Sbjct: 136 GIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 171
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 15/161 (9%)
Query: 29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLLSGQ 86
FG+ LG G FG T A +A K +A+ + E++I L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDL--FDRIIAKGYYSERDAAPV-LRAIVN-AVNV 142
NIV L A V V+ E C GDL F R A+ + D P+ LR +++ + V
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 143 CHSMGVM------HRDLKPENFCFISRDDNALLKVTDFGSA 177
M + HRD+ N + + + K+ DFG A
Sbjct: 170 AQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA 207
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 34/176 (19%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
P++ V Y +++G+G FG ++ + A K M+R E +
Sbjct: 91 PHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALK---------------MVRNEKR 135
Query: 79 IRRLLSGQPNIVE-LKSAHEDET--AVHVV------MELCQGGDLFD----RIIAKGYYS 125
R + + I+E L+ +D T +H++ +C +L +I K +
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKF- 194
Query: 126 ERDAAPVLRAIVNAVNVC----HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + P++R +++ C H ++H DLKPEN + + + +KV DFGS+
Sbjct: 195 QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENI-LLKQQGRSGIKVIDFGSS 249
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 34/176 (19%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
P++ V Y +++G+G FG ++ + A K M+R E +
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALK---------------MVRNEKR 135
Query: 79 IRRLLSGQPNIVE-LKSAHEDET--AVHVV------MELCQGGDLFD----RIIAKGYYS 125
R + + I+E L+ +D T +H++ +C +L +I K +
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKF- 194
Query: 126 ERDAAPVLRAIVNAVNVC----HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + P++R +++ C H ++H DLKPEN + + + +KV DFGS+
Sbjct: 195 QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENI-LLKQQGRSGIKVIDFGSS 249
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 66/161 (40%), Gaps = 15/161 (9%)
Query: 29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLLSGQ 86
FG+ LG G FG T A +A K +A+ + E++I L
Sbjct: 42 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDL--FDRIIAKGYYSERDAAPV-LRAIVN-AVNV 142
NIV L A V V+ E C GDL F R A+ + D P+ LR +++ + V
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 143 CHSMGVM------HRDLKPENFCFISRDDNALLKVTDFGSA 177
M + HRD+ N + + + K+ DFG A
Sbjct: 162 AQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA 199
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 21/159 (13%)
Query: 29 FGRMLGRGRFGVTY---LCTENSTNMPYACKSMA---KKPKMKYAENDMMIRREIQIRRL 82
+ + +G+G FG+ + L + S A KS+ + + + E +RE+ I
Sbjct: 23 YEKQIGKGGFGLVHKGRLVKDKSV---VAIKSLILGDSEGETEMIEKFQEFQREVFIMSN 79
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNV 142
L+ PNIV+L + +VME GDL+ R++ K + + LR +++
Sbjct: 80 LN-HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVK--LRLMLDIALG 134
Query: 143 CHSM-----GVMHRDLKPENFCFISRDDNALL--KVTDF 174
M ++HRDL+ N S D+NA + KV DF
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 4 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ 120
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 121 MELDHERMSY-LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 173
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 5 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 64
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 65 QTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ 121
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 122 MELDHERMSY-LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 174
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 3 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 62
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 63 QTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ 119
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 120 MELDHERMSY-LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 172
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 34/176 (19%)
Query: 19 PYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQ 78
P++ V Y +++G+G FG ++ + A K M+R E +
Sbjct: 91 PHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALK---------------MVRNEKR 135
Query: 79 IRRLLSGQPNIVE-LKSAHEDET--AVHVV------MELCQGGDLFD----RIIAKGYYS 125
R + + I+E L+ +D T +H++ +C +L +I K +
Sbjct: 136 FHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKF- 194
Query: 126 ERDAAPVLRAIVNAVNVC----HSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + P++R +++ C H ++H DLKPEN + + + +KV DFGS+
Sbjct: 195 QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENI-LLKQQGRSGIKVIDFGSS 249
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 4 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 63
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 64 QTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ 120
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 121 MELDHERMSY-LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 173
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 5 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 64
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 65 QTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ 121
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 122 MELDHERMSY-LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 174
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 42 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 102 QTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ 158
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 159 MELDHER-MSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 211
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 35/141 (24%)
Query: 296 EYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKK 355
++ + F FDKDN+G+ F + T G K A +
Sbjct: 63 DFANHLFTVFDKDNNGFIHFEEFITVLSTTSR------------GTLEEKLSWAFELY-- 108
Query: 356 LVLQGDIDGNGNIDFIEFVNLMTDIYKL-----------ETPEL-LEKAFQYLDKNSDQF 403
D++ +G I F E + ++ +YK+ TPE+ ++K F+ +DKN D +
Sbjct: 109 -----DLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGY 163
Query: 404 ITVNELETAFKENNMGDDATI 424
IT++E F+E + D + I
Sbjct: 164 ITLDE----FREGSKVDPSII 180
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 52/138 (37%), Gaps = 16/138 (11%)
Query: 211 VKVIVEYLP-GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAA 269
VK+ ++ P G F D D NG + ++E L+ E + E
Sbjct: 49 VKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELY 108
Query: 270 DMDGNGAIDYTEF------------TAATIQRQKLERSEYLSKAFQYFDKDNSGY---DE 314
D++ +G I + E + T+ + + K F+ DK+ GY DE
Sbjct: 109 DLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDE 168
Query: 315 FRAMVESPQTIRNVSHIY 332
FR + +I ++Y
Sbjct: 169 FREGSKVDPSIIGALNLY 186
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
++ FI +DTD++GT+ EL+ LT +G L+ V + A NG I + ++ A
Sbjct: 104 GWRQHFISLDTDRSGTVDPQELQKALTTMGFRLSPQAVNSI--AKRYSTNGKITFDDYIA 161
Query: 285 ATIQRQKLERS 295
++ + L S
Sbjct: 162 CCVKLRALTDS 172
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
N+ + E+ V++VMEL ++I ER + +L ++ + HS G
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 140
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLKP N S + LK+ DFG A
Sbjct: 141 IIHRDLKPSNIVVKS---DCTLKILDFGLA 167
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 6 SKSQRQRYPI-LGKPYEDVMLHYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAK---- 60
SK Q Y + +G V+ Y + +G G G+ + + A K +++
Sbjct: 42 SKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN 101
Query: 61 KPKMKYAENDMMIRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIA 120
+ K A ++++ + + + ++S N+ + E+ V++VMEL ++I
Sbjct: 102 QTHAKRAYRELVLMKCVNHKNIISLL-NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQ 158
Query: 121 KGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
ER + +L ++ + HS G++HRDLKP N S + LK+ DFG A
Sbjct: 159 MELDHERMSY-LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLA 211
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
N+ + E+ V++VMEL ++I ER + +L ++ + HS G
Sbjct: 83 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 139
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLKP N S + LK+ DFG A
Sbjct: 140 IIHRDLKPSNIVVKS---DCTLKILDFGLA 166
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG 147
N+ + E+ V++VMEL ++I ER + +L ++ + HS G
Sbjct: 84 NVFTPQKTLEEFQDVYLVMELMDAN--LCQVIQMELDHERMSY-LLYQMLCGIKHLHSAG 140
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLKP N S + LK+ DFG A
Sbjct: 141 IIHRDLKPSNIVVKS---DCTLKILDFGLA 167
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 276
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 335
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HR+L N C + +N L+KV DFG + L
Sbjct: 336 FIHRNLAARN-CLVG--ENHLVKVADFGLSRL 364
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 13/170 (7%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
HY F + LG G F L YA K + + E +RE + RL +
Sbjct: 30 HYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEA----QREADMHRLFN- 84
Query: 86 QPNIVELKS-AHEDETAVH---VVMELCQGGDLF---DRIIAKG-YYSERDAAPVLRAIV 137
PNI+ L + + A H +++ + G L+ +R+ KG + +E +L I
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 138 NAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEA 187
+ H+ G HRDLKP N L+ + A + E +A
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA 194
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 270 DMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG---YDEFRAMVES 321
D D NG ID+ EF A + E ++ L AFQ +D DN+G YDE +V++
Sbjct: 73 DADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA 127
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 31/127 (24%)
Query: 295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
S + F FD D +GY +F+ + + G N K A +
Sbjct: 62 SAFAEYVFNVFDADKNGYIDFKEFICALSVTSR------------GELNDKLIWAFQLY- 108
Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYKL-----------ETPE-LLEKAFQYLDKNSDQ 402
D+D NG I + E + ++ IYK+ +TPE + K F +DKN D
Sbjct: 109 ------DLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDG 162
Query: 403 FITVNEL 409
+T+ E
Sbjct: 163 QLTLEEF 169
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 67
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + I + + + R ++ H+
Sbjct: 68 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALL---------FEEEGGEASDDTSVILR 196
++HRDLK N F+ D +K+ DFG A + FE+ G ++R
Sbjct: 123 KSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 197 MK 198
M+
Sbjct: 180 MQ 181
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 13 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 69
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + I + + + R ++ H+
Sbjct: 70 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALL---------FEEEGGEASDDTSVILR 196
++HRDLK N F+ D +K+ DFG A + FE+ G ++R
Sbjct: 125 KSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 197 MK 198
M+
Sbjct: 182 MQ 183
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 72
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + I + + + R ++ H+
Sbjct: 73 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALL---------FEEEGGEASDDTSVILR 196
++HRDLK N F+ D +K+ DFG A + FE+ G ++R
Sbjct: 128 KSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 197 MK 198
M+
Sbjct: 185 MQ 186
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 74/182 (40%), Gaps = 22/182 (12%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 16 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 72
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + I + + + R ++ H+
Sbjct: 73 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALL---------FEEEGGEASDDTSVILR 196
++HRDLK N F+ D +K+ DFG A + FE+ G ++R
Sbjct: 128 KSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 197 MK 198
M+
Sbjct: 185 MQ 186
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 17/133 (12%)
Query: 60 KKPKMKYAENDMMIR--REIQIRRLLSG--QPNIVEL-----KSAHEDETAVHVVMELCQ 110
K+ +++ E M + RE+ + R L PN+V L S + ET + +V E
Sbjct: 43 KRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD 102
Query: 111 GGDL---FDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA 167
DL D++ G +E ++ ++ ++ HS V+HRDLKP+N S +
Sbjct: 103 Q-DLTTYLDKVPEPGVPTE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SG 157
Query: 168 LLKVTDFGSALLF 180
+K+ DFG A ++
Sbjct: 158 QIKLADFGLARIY 170
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 37.0 bits (84), Expect = 0.020, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGN 274
L + +K+ F +D DK+G + DEL+ L + LT+ + K ++A D DG+
Sbjct: 35 LTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 275 GAIDYTEFTA 284
G I E+TA
Sbjct: 95 GKIGVDEWTA 104
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 13/160 (8%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 38 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 94
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + I + + + R ++ H+
Sbjct: 95 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
++HRDLK N F+ D +K+ DFG A + G
Sbjct: 150 KSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSG 186
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 67
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + I + + + R ++ H+
Sbjct: 68 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLK N F+ D +K+ DFG A
Sbjct: 123 KSIIHRDLKSNNI-FLHED--LTVKIGDFGLA 151
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 17/133 (12%)
Query: 60 KKPKMKYAENDMMIR--REIQIRRLLSG--QPNIVEL-----KSAHEDETAVHVVMELCQ 110
K+ +++ E M + RE+ + R L PN+V L S + ET + +V E
Sbjct: 43 KRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD 102
Query: 111 GGDL---FDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA 167
DL D++ G +E ++ ++ ++ HS V+HRDLKP+N S +
Sbjct: 103 Q-DLTTYLDKVPEPGVPTE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SG 157
Query: 168 LLKVTDFGSALLF 180
+K+ DFG A ++
Sbjct: 158 QIKLADFGLARIY 170
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 13/160 (8%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 95
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + I + + + R ++ H+
Sbjct: 96 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGG 185
++HRDLK N F+ D +K+ DFG A + G
Sbjct: 151 KSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSG 187
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 17/133 (12%)
Query: 60 KKPKMKYAENDMMIR--REIQIRRLLSG--QPNIVEL-----KSAHEDETAVHVVMELCQ 110
K+ +++ E M + RE+ + R L PN+V L S + ET + +V E
Sbjct: 43 KRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD 102
Query: 111 GGDL---FDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNA 167
DL D++ G +E ++ ++ ++ HS V+HRDLKP+N S +
Sbjct: 103 Q-DLTTYLDKVPEPGVPTE-TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SG 157
Query: 168 LLKVTDFGSALLF 180
+K+ DFG A ++
Sbjct: 158 QIKLADFGLARIY 170
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
++ FI DTD++GT+ EL+ LT +G L+ V + A NG I + ++ A
Sbjct: 104 GWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSI--AKRYSTNGKITFDDYIA 161
Query: 285 ATIQRQKLERS 295
++ + L S
Sbjct: 162 CCVKLRALTDS 172
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 62/152 (40%), Gaps = 11/152 (7%)
Query: 28 SFGRM--LGRGRFGVTYLCTENSTNMPYACK-SMAKKPKMKYAENDMMIRREIQIRRLLS 84
SF R+ LG G +G + YA K SM+ + ++ E+ +
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSP---FRGPKDRARKLAEVGSHEKVG 114
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVC 143
P V L+ A E+ +++ ELC G L A G E LR + A+
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
HS G++H D+KP N R K+ DFG
Sbjct: 174 HSQGLVHLDVKPANIFLGPRGR---CKLGDFG 202
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 17/152 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 318
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL---RAIVNAVNVCHSMG 147
+L E +++ E G+L D + + E +A +L I +A+
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN 377
Query: 148 VMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HR+L N C + +N L+KV DFG + L
Sbjct: 378 FIHRNLAARN-CLVG--ENHLVKVADFGLSRL 406
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
++ + CH ++HRDLKP+N R LK+ DFG A F
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAF 158
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 39 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 95
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + I + + + R ++ H+
Sbjct: 96 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLK N F+ D +K+ DFG A
Sbjct: 151 KSIIHRDLKSNNI-FLHED--LTVKIGDFGLA 179
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 22/182 (12%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 11 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 67
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHS 145
L + + +V + C+G L+ + I + + + R ++ H+
Sbjct: 68 -----LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALL---------FEEEGGEASDDTSVILR 196
++HRDLK N F+ D +K+ DFG A + FE+ G ++R
Sbjct: 123 KSIIHRDLKSNNI-FLHED--LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 197 MK 198
M+
Sbjct: 180 MQ 181
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
F DT+ +G +S EL L +GS +T +V+++M D DG+G I + EFT
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLGS-VTPDEVRRMMAEIDTDGDGFISFDEFT 69
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
F DT+ +G +S EL L +GS + +V+++M D DG+G ID+ EF +
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 61
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTA 284
F DT+ +G +S EL L +GS + +V+++M D DG+G ID+ EF +
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTSAD-EVQRMMAEIDTDGDGFIDFNEFIS 62
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 199 QFRRMSKLKKLTVKVIVEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLT 258
Q +RMS +LT E+ Q ++E F D D GT+ EL+ + +G
Sbjct: 15 QRKRMSPKPELTE---------EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPK 65
Query: 259 EFDVKQLMEAADMDGNGAIDYTEFTAATIQR 289
+ ++K+++ D +G G +++ +F Q+
Sbjct: 66 KEEIKKMISEIDKEGTGKMNFGDFLTVMTQK 96
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 36.6 bits (83), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 13/152 (8%)
Query: 28 SFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYA-ENDMMIRREIQIRRLLSGQ 86
+ G+ +G G FG Y + A P+ A +N++ + R+ + +L
Sbjct: 31 TVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL--- 87
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHS 145
L + + + +V + C+G L+ + I + + + R ++ H+
Sbjct: 88 -----LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++HRDLK N F+ D +K+ DFG A
Sbjct: 143 KSIIHRDLKSNNI-FLHED--LTVKIGDFGLA 171
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
+ L E+ KE F D D +G ++ +EL + + TE +++ ++ D DGNG
Sbjct: 2 DILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNG 61
Query: 276 AIDYTEFTAATIQRQK 291
I++ EF + ++ K
Sbjct: 62 TIEFDEFLSLMAKKVK 77
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 19/78 (24%)
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF FDKD G + E IR++ T++ L+ ++ +
Sbjct: 14 EAFGLFDKDGDGC---ITVEELATVIRSLDQNPTEEE----------------LQDMISE 54
Query: 360 GDIDGNGNIDFIEFVNLM 377
D DGNG I+F EF++LM
Sbjct: 55 VDADGNGTIEFDEFLSLM 72
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
+L E K F D D G +S EL + +G T+ ++ ++E D DG+G
Sbjct: 2 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 61
Query: 277 IDYTEFTAATIQRQK 291
ID+ EF +++ K
Sbjct: 62 IDFEEFLVMMVRQMK 76
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 19/153 (12%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAE--NDMMIRREIQIRRLLSGQPNIV 90
LG G++G Y ++ A K++ K+ M+ E + + +EI+ PN+V
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIK-------HPNLV 279
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVL----RAIVNAVNVCHSM 146
+L E +++ E G+L D + + + +A VL I +A+
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYL--RECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGSALL 179
+HR+L N C + +N L+KV DFG + L
Sbjct: 338 NFIHRNLAARN-CLVG--ENHLVKVADFGLSRL 367
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 29/173 (16%)
Query: 28 SFGRMLGRGRFG-----VTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
SFG+ LG G FG Y ++ M A K + KP E + ++ E+++
Sbjct: 44 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMS-ELKVLSY 100
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRA----- 135
L NIV L A V+ E C GDL + + K + + + ++
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 136 -----------IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + S +HRDL N I + K+ DFG A
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLA 210
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 230 FIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
F D + +G +S EL L +GS +T +VK +M D DG+G I + EFT
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLGS-ITPDEVKHMMAEIDTDGDGFISFQEFT 67
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 216 EYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNG 275
+ L E+ KE F D D +G ++ +EL + + TE +++ ++ D DGNG
Sbjct: 2 DILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNG 61
Query: 276 AIDYTEFTA 284
I++ EF +
Sbjct: 62 TIEFDEFLS 70
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 19/79 (24%)
Query: 300 KAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQ 359
+AF FDKD G + E IR++ T++ L+ ++ +
Sbjct: 14 EAFGLFDKDGDGC---ITVEELATVIRSLDQNPTEEE----------------LQDMISE 54
Query: 360 GDIDGNGNIDFIEFVNLMT 378
D DGNG I+F EF++LM
Sbjct: 55 VDADGNGTIEFDEFLSLMA 73
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 29/173 (16%)
Query: 28 SFGRMLGRGRFG-----VTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
SFG+ LG G FG Y ++ M A K + KP E + ++ E+++
Sbjct: 26 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMS-ELKVLSY 82
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRA----- 135
L NIV L A V+ E C GDL + + K + + + ++
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 136 -----------IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + S +HRDL N I + K+ DFG A
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLA 192
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 29/173 (16%)
Query: 28 SFGRMLGRGRFG-----VTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
SFG+ LG G FG Y ++ M A K + KP E + ++ E+++
Sbjct: 42 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMS-ELKVLSY 98
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRA----- 135
L NIV L A V+ E C GDL + + K + + + ++
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 136 -----------IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + S +HRDL N I + K+ DFG A
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLA 208
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 29/173 (16%)
Query: 28 SFGRMLGRGRFG-----VTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
SFG+ LG G FG Y ++ M A K + KP E + ++ E+++
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMS-ELKVLSY 105
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRA----- 135
L NIV L A V+ E C GDL + + K + + + ++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 136 -----------IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + S +HRDL N I + K+ DFG A
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLA 215
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.8 bits (81), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 29/173 (16%)
Query: 28 SFGRMLGRGRFG-----VTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRL 82
SFG+ LG G FG Y ++ M A K + KP E + ++ E+++
Sbjct: 49 SFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML--KPSAHLTEREALMS-ELKVLSY 105
Query: 83 LSGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRA----- 135
L NIV L A V+ E C GDL + + K + + + ++
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 136 -----------IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + S +HRDL N I + K+ DFG A
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN---ILLTHGRITKICDFGLA 215
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 88 NIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGY-YSERDAAPVLRAIVNAVNVCHSM 146
N VE H D ++VME GG R +KG +A L I+ A++ HS+
Sbjct: 146 NFVEHTDRHGDPVG-YIVMEYV-GGQSLKR--SKGQKLPVAEAIAYLLEILPALSYLHSI 201
Query: 147 GVMHRDLKPENFCFISRDDNALLKVTDFGS 176
G+++ DLKPEN LK+ D G+
Sbjct: 202 GLVYNDLKPENIMLTEEQ----LKLIDLGA 227
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 35.8 bits (81), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-------- 84
+G G +G + T + A K +++ ++ + +R + RLL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-----FQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G ++ + E+ V++V L G DL + I+ ++ ++ I+ + H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S ++HRDLKP N +++ LK+ DFG A
Sbjct: 143 SADIIHRDLKPSNLAV---NEDXELKILDFGLA 172
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 29 FGRMLGRGRFGVT----YLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
GR +G G+FG Y+ EN M A K+ K + + ++ + +R+
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPA-MAVAIKTC--KNCTSDSVREKFLQEALTMRQF-- 68
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--IVNAVNV 142
P+IV+L E V ++MELC G+L + + YS A+ +L A + A+
Sbjct: 69 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAY 126
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
S +HRD+ N S D +K+ DFG + E+
Sbjct: 127 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMED 163
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-------- 84
+G G +G + T + A K ++K ++ + +R + RLL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKP-----FQSIIHAKRTYRELRLLKHMKHENVI 96
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G ++ + E+ V++V L G DL + I+ ++ ++ I+ + H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIH 154
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 155 SADIIHRDLKPSN---LAVNEDCELKILDFGLA 184
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 216 EYLPGEET------QALKEKFIE----MDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQL 265
++LP +T Q E ++E D + NGT+ E+R L +G +TE +V+QL
Sbjct: 68 QFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQL 127
Query: 266 MEAADMDGNGAIDYTEFT 283
+ A D NG I+Y E
Sbjct: 128 V-AGHEDSNGCINYEELV 144
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 20/152 (13%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR---EIQIRRLLSGQPNI 89
LGRG +GV E ++P + + MA K +++ N +R ++ I P
Sbjct: 15 LGRGAYGVV----EKMRHVP-SGQIMAVK-RIRATVNSQEQKRLLMDLDISMRTVDCPFT 68
Query: 90 VELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDA-APVLRAIVNAVNVCHS- 145
V A E V + MEL + ++I KG D + +IV A+ HS
Sbjct: 69 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 146 MGVMHRDLKPENFCFISRDDNAL--LKVTDFG 175
+ V+HRD+KP N NAL +K+ DFG
Sbjct: 129 LSVIHRDVKPSNVLI-----NALGQVKMCDFG 155
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-------- 84
+G G +G + T + A K +++ ++ + +R + RLL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-----FQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G ++ + E+ V++V L G DL + I+ ++ ++ I+ + H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRGLKYIH 142
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 143 SADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 18/151 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-------- 84
+G G +G + T + A K +++ ++ + +R + RLL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-----FQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G ++ + E+ V++V L G DL + I+ ++ ++ I+ + H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKSQKLTDDHVQFLIYQILRGLKYIH 142
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
S ++HRDLKP N ++++ LK+ DFG
Sbjct: 143 SADIIHRDLKPSNLAV---NEDSELKILDFG 170
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
+L E K F D D G +S EL + +G T+ ++ ++E D DG+G
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQK 291
ID+ EF +++ K
Sbjct: 73 IDFEEFLVMMVRQMK 87
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Query: 29 FGRMLGRGRFG-----VTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLL 83
FG++LG G FG Y ++ ++ A K + K K +E + ++ E+++ L
Sbjct: 49 FGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML--KEKADSSEREALMS-ELKMMTQL 105
Query: 84 SGQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK 121
NIV L A ++++ E C GDL + + +K
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK 143
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++++ LK+ DFG A
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLA 178
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 11/78 (14%)
Query: 216 EYLPGEET------QALKEKFIE----MDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQL 265
++LP +T Q E ++E D + NGT+ E+R L +G +TE +V+QL
Sbjct: 66 QFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQL 125
Query: 266 MEAADMDGNGAIDYTEFT 283
+ A D NG I+Y E
Sbjct: 126 V-AGHEDSNGCINYEELV 142
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++++ LK+ DFG A
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLA 174
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 29 FGRMLGRGRFGVT----YLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
GR +G G+FG Y+ EN M A K+ K + + ++ + +R+
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPA-MAVAIKTC--KNCTSDSVREKFLQEALTMRQF-- 448
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--IVNAVNV 142
P+IV+L E V ++MELC G+L + + +S A+ +L A + A+
Sbjct: 449 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAY 506
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
S +HRD+ N S D +K+ DFG + E+
Sbjct: 507 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMED 543
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
Y+ + Q ++ + E+D D++GT++ E+R L + G L + Q++ A D
Sbjct: 598 YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELI 656
Query: 277 IDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
ID+ F + R E L K F+ D +N+G
Sbjct: 657 IDFDNFVRCLV------RLEILFKIFKQLDPENTG 685
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
Y+ + Q ++ + E+D D++GT++ E+R L + G L + Q++ A D
Sbjct: 598 YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELI 656
Query: 277 IDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
ID+ F + R E L K F+ D +N+G
Sbjct: 657 IDFDNFVRCLV------RLEILFKIFKQLDPENTG 685
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++ + H+ G++HRDLKP N +++ LK+ DFG A
Sbjct: 137 MLKGLRYIHAAGIIHRDLKPGNLAV---NEDCELKILDFGLA 175
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 35.4 bits (80), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
Y+ + Q ++ + E+D D++GT++ E+R L + G L + Q++ A D
Sbjct: 598 YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP-CQLHQVIVARFADDELI 656
Query: 277 IDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
ID+ F + R E L K F+ D +N+G
Sbjct: 657 IDFDNFVRCLV------RLEILFKIFKQLDPENTG 685
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRR---EIQIRRLLSGQPNI 89
LGRG +GV E ++P + MA K +++ N +R ++ I P
Sbjct: 59 LGRGAYGVV----EKMRHVPSG-QIMAVK-RIRATVNSQEQKRLLMDLDISMRTVDCPFT 112
Query: 90 VELKSAHEDETAVHVVMELCQGG--DLFDRIIAKGYYSERDA-APVLRAIVNAVNVCHS- 145
V A E V + MEL + ++I KG D + +IV A+ HS
Sbjct: 113 VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 146 MGVMHRDLKPENFCFISRDDNAL--LKVTDFG 175
+ V+HRD+KP N NAL +K+ DFG
Sbjct: 173 LSVIHRDVKPSNVLI-----NALGQVKMCDFG 199
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 102 VHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFI 161
V++V L G DL + I+ ++ ++ I+ + HS ++HRDLKP N +
Sbjct: 98 VYLVTHL-MGADL-NNIVKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN---L 152
Query: 162 SRDDNALLKVTDFGSA 177
+ +++ LK+ DFG A
Sbjct: 153 AVNEDCELKILDFGLA 168
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 35.0 bits (79), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 36/174 (20%)
Query: 161 ISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSKLKKL--------TVK 212
IS DD D G LF + GE ++ ++ L+ R ++K + + T K
Sbjct: 524 ISEDD------IDDGVRRLFAQLAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCK 577
Query: 213 VIVEYLP--GEETQALKEKFI-------------EMDTDKNGTLSYDELRAGLTKVGSML 257
++V+ L G LKE +I E+D D++GT++ E+R L + G +
Sbjct: 578 IMVDMLDSDGSGKLGLKEFYILWTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKM 637
Query: 258 TEFDVKQLMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
+ Q++ A D ID+ F + R E L K F+ D +N+G
Sbjct: 638 P-CQLHQVIVARFADDQLIIDFDNFVRCLV------RLETLFKIFKQLDPENTG 684
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 132 VLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
++ I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 159 LIYQILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 201
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 35.0 bits (79), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 18/137 (13%)
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEEEGGEASDDTSVILRMKQFRRMSK 205
MG + L+PE + +D LL+ TDF + E G D S L M++F+
Sbjct: 1 MGKQNSKLRPE----VMQD---LLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFK---- 49
Query: 206 LKKLTVKVIVEYLP-GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQ 264
K+ + P G+ ++ + F D + +GT+ + E L+ E +K
Sbjct: 50 ------KIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW 103
Query: 265 LMEAADMDGNGAIDYTE 281
D+DGNG I E
Sbjct: 104 AFSMYDLDGNGYISKAE 120
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 270 DMDGNGAIDYTEFTAA--TIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTI 325
D +G+G ID+ EF A R KLE+ L AF +D D +GY M+E Q I
Sbjct: 73 DANGDGTIDFREFIIALSVTSRGKLEQK--LKWAFSMYDLDGNGYISKAEMLEIVQAI 128
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 31/127 (24%)
Query: 295 SEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLK 354
S++ F+ FD + G +FR + L T + + LK
Sbjct: 62 SKFAEHVFRTFDANGDGTIDFREFI-------------------IALSVTSRGKLEQKLK 102
Query: 355 KLVLQGDIDGNGNIDFIEFVNLMTDIYKL-----------ETPE-LLEKAFQYLDKNSDQ 402
D+DGNG I E + ++ IYK+ TPE EK F+ +D N D
Sbjct: 103 WAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDG 162
Query: 403 FITVNEL 409
+++ E
Sbjct: 163 KLSLEEF 169
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 18/153 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-------- 84
+G G +G + T + A K +++ ++ + +R + RLL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRP-----FQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G ++ + E+ V++V L G DL + I+ ++ ++ I+ + H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIH 147
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S ++HRDLKP N +++ LK+ DFG A
Sbjct: 148 SADIIHRDLKPSNLAV---NEDXELKILDFGLA 177
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-------- 84
+G G +G + T + A K +++ ++ + +R + RLL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-----FQSIIHAKRTYRELRLLKHMKHENVI 107
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G ++ + E+ V++V L G DL + I+ ++ ++ I+ + H
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIH 165
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 166 SADIIHRDLKPSN---LAVNEDCELKILDFGLA 195
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 183
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.0 bits (79), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 177
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 35.0 bits (79), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 133 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 171
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 179
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 179
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 179
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 178
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.0 bits (79), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 174
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 192
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 174
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 157 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 195
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 184
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 144 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 182
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 146 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 184
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 141 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 179
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 136 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 174
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 177
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS-------- 84
+G G +G + T + A K +++ ++ + +R + RLL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRP-----FQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCH 144
G ++ + E+ V++V L G DL + I+ ++ ++ I+ + H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHL-MGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIH 138
Query: 145 SMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
S ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 139 SADIIHRDLKPSN---LAVNEDCELKILDFGLA 168
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N +++ LK+ DFG A
Sbjct: 145 ILRGLKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLA 183
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 191
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 139 ILRGLKYIHSADIIHRDLKPSN---LAVNEDXELKILDFGLA 177
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 34.7 bits (78), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 169
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 34.7 bits (78), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 172
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 131 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 169
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 192
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 153 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 191
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 132 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 170
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 178
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 154 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 192
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 168
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 234 DTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
D D+ G +S+ L+ ++G LT+ +++++++ AD DG+G + EF
Sbjct: 21 DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 69
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 130 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 168
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 29 FGRMLGRGRFGVT----YLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
GR +G G+FG Y+ EN + A K+ K + + ++ + +R+
Sbjct: 11 LGRCIGEGQFGDVHQGIYMSPENPA-LAVAIKTC--KNCTSDSVREKFLQEALTMRQF-- 65
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--IVNAVNV 142
P+IV+L E V ++MELC G+L + + YS A+ +L A + A+
Sbjct: 66 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAY 123
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
S +HRD+ N S D +K+ DFG + E+
Sbjct: 124 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMED 160
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ DFG A
Sbjct: 140 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDFGLA 178
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 29 FGRMLGRGRFGVT----YLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
GR +G G+FG Y+ EN + A K+ K + + ++ + +R+
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPA-LAVAIKTC--KNCTSDSVREKFLQEALTMRQF-- 68
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--IVNAVNV 142
P+IV+L E V ++MELC G+L + + YS A+ +L A + A+
Sbjct: 69 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAY 126
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
S +HRD+ N S D +K+ DFG + E+
Sbjct: 127 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMED 163
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 34.7 bits (78), Expect = 0.11, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGN 274
L + +K+ F +D DK+G + +EL+ L S +LT + K + A D DG+
Sbjct: 35 LSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGD 94
Query: 275 GAIDYTEFTA 284
G I EF +
Sbjct: 95 GKIGVEEFQS 104
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 29 FGRMLGRGRFG----VTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
GR +G G+FG Y+ EN + A K+ K + + ++ + +R+
Sbjct: 17 LGRCIGEGQFGDVHQGIYMSPENPA-LAVAIKTC--KNCTSDSVREKFLQEALTMRQF-- 71
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--IVNAVNV 142
P+IV+L E V ++MELC G+L + + YS A+ +L A + A+
Sbjct: 72 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAY 129
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
S +HRD+ N S D +K+ DFG + E+
Sbjct: 130 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMED 166
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 29 FGRMLGRGRFGVT----YLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
GR +G G+FG Y+ EN + A K+ K + + ++ + +R+
Sbjct: 16 LGRCIGEGQFGDVHQGIYMSPENPA-LAVAIKTC--KNCTSDSVREKFLQEALTMRQF-- 70
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--IVNAVNV 142
P+IV+L E V ++MELC G+L + + YS A+ +L A + A+
Sbjct: 71 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAY 128
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
S +HRD+ N S D +K+ DFG + E+
Sbjct: 129 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMED 165
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 29 FGRMLGRGRFG----VTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
GR +G G+FG Y+ EN + A K+ K + + ++ + +R+
Sbjct: 42 LGRCIGEGQFGDVHQGIYMSPENPA-LAVAIKTC--KNCTSDSVREKFLQEALTMRQF-- 96
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--IVNAVNV 142
P+IV+L E V ++MELC G+L + + YS A+ +L A + A+
Sbjct: 97 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAY 154
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
S +HRD+ N S D +K+ DFG + E+
Sbjct: 155 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMED 191
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 234 DTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF------TAATI 287
DT+K+G + + E A + + E +K + D DGNG+ID E A
Sbjct: 67 DTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALN 126
Query: 288 QRQKLERSEYLSKAFQYFDKDNSG 311
+Q L E+++ F D +N G
Sbjct: 127 GQQTLSPEEFINLVFHKIDINNDG 150
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 262 VKQLMEAADMDGNGAIDYTEFTAAT--IQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMV 319
+ Q+ D + +G +D+ EF AA I ++K+E+ L F+ +D D +G + ++
Sbjct: 59 IDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQK--LKWYFKLYDADGNGSIDKNELL 116
Query: 320 ESPQTIRNVSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTD 379
+ ++ ++ T ++F +N++ + DI+ +G + EF+N M
Sbjct: 117 DMFMAVQALNGQQTLSPEEF----------INLVFHKI---DINNDGELTLEEFINGMA- 162
Query: 380 IYKLETPELLEKAFQYLD 397
+ +LLE ++ D
Sbjct: 163 ----KDQDLLEIVYKSFD 176
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 65/154 (42%), Gaps = 28/154 (18%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACK--SMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIV 90
LG G GV + + A K + KP ++ I RE+Q+ + P IV
Sbjct: 24 LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN-----QIIRELQVLHECN-SPYIV 77
Query: 91 ELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMG--- 147
A + + + ME GG L D+++ ++A + I+ V++ G
Sbjct: 78 GFYGAFYSDGEISICMEHMDGGSL-DQVL-------KEAKRIPEEILGKVSIAVLRGLAY 129
Query: 148 ------VMHRDLKPENFCFISRDDNALLKVTDFG 175
+MHRD+KP N SR + +K+ DFG
Sbjct: 130 LREKHQIMHRDVKPSNILVNSRGE---IKLCDFG 160
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 356 LVLQGDIDGNGNIDFIEFVNLMTDIYKLETPELLEKAFQYLDKNSDQ 402
+V +GD+DG+G ++ EF LM + +PE++E A +L+K Q
Sbjct: 82 MVREGDLDGDGALNQTEFCVLMVRL----SPEMMEDAETWLEKALTQ 124
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 29 FGRMLGRGRFG----VTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
GR +G G+FG Y+ EN + A K+ K + + ++ + +R+
Sbjct: 19 LGRCIGEGQFGDVHQGIYMSPENPA-LAVAIKTC--KNCTSDSVREKFLQEALTMRQF-- 73
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--IVNAVNV 142
P+IV+L E V ++MELC G+L + + YS A+ +L A + A+
Sbjct: 74 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAY 131
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
S +HRD+ N S D +K+ DFG + E+
Sbjct: 132 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMED 168
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGN 274
L + +K+ F + DK+G + DEL+ L + LT+ + K ++A D DG+
Sbjct: 35 LTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 275 GAIDYTEFTA 284
G I E+TA
Sbjct: 95 GKIGVDEWTA 104
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 8/92 (8%)
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK--GYYSERDAAPVLRAIVNAVN-VC 143
P IV+ T V + MEL G +++ + G ER + AIV A+ +
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK 141
Query: 144 HSMGVMHRDLKPENFCFISRDDNALLKVTDFG 175
GV+HRD+KP N I D+ +K+ DFG
Sbjct: 142 EKHGVIHRDVKPSN---ILLDERGQIKLCDFG 170
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 233 MDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
+D D+NG +S DE +A G + + D ++ D+D +G +D E T
Sbjct: 118 IDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEMT 168
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 265 LMEAADMDGNGAIDYTEFTAATIQRQKLERSEYLSKAFQYFDKDNSG 311
L + D D NGAI E+ A T ++ SE + F+ D D SG
Sbjct: 114 LFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESG 160
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRA---GLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+K+ F +D DK+G + DEL + G + L+ + K LM A D DG+G I+ EF
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEEF 102
Query: 283 T 283
+
Sbjct: 103 S 103
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 29 FGRMLGRGRFGVT----YLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
GR +G G+FG Y+ EN M A K+ K + + ++ + +R+
Sbjct: 394 LGRCIGEGQFGDVHQGIYMSPENPA-MAVAIKTC--KNCTSDSVREKFLQEALTMRQF-- 448
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--IVNAVNV 142
P+IV+L E V ++MELC G+L + + +S A+ +L A + A+
Sbjct: 449 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAY 506
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
S +HRD+ N + D +K+ DFG + E+
Sbjct: 507 LESKRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMED 543
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 34.3 bits (77), Expect = 0.15, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 220 GEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDY 279
GEE L+ F D +++G L +E RA T++ + D + + + D D +GAI +
Sbjct: 23 GEELARLRSVFAACDANRSGRLEREEFRALCTEL--RVRPADAEAVFQRLDADRDGAITF 80
Query: 280 TEF 282
EF
Sbjct: 81 QEF 83
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 113 DLFDRIIAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDN---ALL 169
DLFD + +S + + +++ + HS +++RD+KPENF I R N ++
Sbjct: 93 DLFD--LCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENF-LIGRPGNKTQQVI 149
Query: 170 KVTDFGSA 177
+ DFG A
Sbjct: 150 HIIDFGLA 157
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRA---GLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+K+ F +D DK+G + DEL + G + + L+ + K LM A D DG+G I EF
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 283 T 283
+
Sbjct: 103 S 103
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRA---GLTKVGSMLTEFDVKQLMEAADMDGN 274
L G+ +KE F +D D++G + +EL+ G + G L + + K L+ A D D +
Sbjct: 35 LKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHD 94
Query: 275 GAIDYTEFTAATIQ 288
G I EF Q
Sbjct: 95 GKIGADEFAKMVAQ 108
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 222 ETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTE 281
+ Q LKE F +D D++G + ++L+ + +G + + ++ +++ G +++T
Sbjct: 14 QMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTA 69
Query: 282 FTAATIQR-QKLERSEYLSKAFQYFDKDNSGY---DEFRAMVE------SPQTIRNVSHI 331
F ++ + + L AF FD+D G+ D + ++E S + I+NV
Sbjct: 70 FLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKD 129
Query: 332 YTDKAKKF 339
K K+F
Sbjct: 130 APLKNKQF 137
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 31/49 (63%)
Query: 234 DTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
D D+ G +S+ L+ ++G LT+ +++++++ AD DG+G + EF
Sbjct: 31 DDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 79
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 29 FGRMLGRGRFGVT----YLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLS 84
GR +G G+FG Y+ EN M A K+ K + + ++ + +R+
Sbjct: 14 LGRCIGEGQFGDVHQGIYMSPENPA-MAVAIKTC--KNCTSDSVREKFLQEALTMRQF-- 68
Query: 85 GQPNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRA--IVNAVNV 142
P+IV+L E V ++MELC G+L + + +S A+ +L A + A+
Sbjct: 69 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAY 126
Query: 143 CHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSALLFEE 182
S +HRD+ N S D +K+ DFG + E+
Sbjct: 127 LESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMED 163
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
+L E K F D D G +S EL + +G T+ ++ ++ D DG+G
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQK 291
ID+ EF +++ K
Sbjct: 73 IDFEEFLVMMVRQMK 87
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 60/167 (35%), Gaps = 21/167 (12%)
Query: 29 FGRMLGRGRFGVTYLCTENSTNMPYACKSMAKK--PKMKYAENDMMIRREIQIRRLLSGQ 86
FG+ LG G FG T A +A K +A+ + E++I L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 87 PNIVELKSAHEDETAVHVVMELCQGGDLFDRIIAK-------GY---------YSERDAA 130
NIV L A V V+ E C GDL + + K Y S RD
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 131 PVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
+ + S +HRD+ N + + + K+ DFG A
Sbjct: 170 HFSSQVAQGMAFLASKNCIHRDVAARN---VLLTNGHVAKIGDFGLA 213
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 228 EKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
E F D + NG + ELR LT +G +TE +V+ ++ A D NG I+Y F
Sbjct: 91 EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVL-AGHEDSNGCINYEAF 144
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 35/166 (21%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFTAA 285
L +F +D +K G LS R L ++G++ +++E+ DG+ +D+ F
Sbjct: 31 LHHRFRALDRNKKGYLS----RMDLQQIGALAVNPLGDRIIESFFPDGSQRVDFPGFVRV 86
Query: 286 TIQRQKLE-----------------RSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNV 328
+ +E R L AFQ +D D G M+ Q +R +
Sbjct: 87 LAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEML---QVLRLM 143
Query: 329 SHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFV 374
G+ T++ + N+ + V + D DG+G + F+EF
Sbjct: 144 ----------VGVQVTEE-QLENIADRTVQEADEDGDGAVSFVEFT 178
Score = 31.6 bits (70), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 234 DTDKNGTLSYDELRAGLT-KVGSMLTEFDVKQL----MEAADMDGNGAIDYTEFTAA 285
D D++G +S E+ L VG +TE ++ + ++ AD DG+GA+ + EFT +
Sbjct: 124 DLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKS 180
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 69/157 (43%), Gaps = 33/157 (21%)
Query: 225 ALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEA----ADMDGNGAIDYT 280
AL F ++DT+ NGTLS E R ++G FD K + +A AD D + + ++
Sbjct: 189 ALVADFRKIDTNSNGTLSRKEFREHFVRLG-----FDKKSVQDALFRYADEDESDDVGFS 243
Query: 281 EFTAATIQRQKLERSEYLSKAFQYFDKDNSGYDEFRAMVESPQTIRNVSHIYTDKAKKFG 340
E+ + L R Y AF FDK SG + E Q + +HI KKF
Sbjct: 244 EYVHLGLCLLVL-RILY---AFADFDK--SG----QLSKEEVQKVLEDAHIPESARKKF- 292
Query: 341 LGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLM 377
QF + D+D + ++ + EFV L+
Sbjct: 293 ---EHQFSVV----------DVDDSKSLSYQEFVMLV 316
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 136 IVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLKVTDFGSA 177
I+ + HS ++HRDLKP N ++ +++ LK+ D+G A
Sbjct: 134 ILRGLKYIHSADIIHRDLKPSN---LAVNEDCELKILDYGLA 172
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
H + LG+G FG LC + K+ + + +REIQI + L
Sbjct: 11 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 70
Query: 86 QPNIVELK--SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
IV+ + S ++ +VME G L D + + + + DA+ R ++ + +C
Sbjct: 71 D-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDAS---RLLLYSSQIC 124
Query: 144 HSM------GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
M +HRDL N I + A +K+ DFG A L
Sbjct: 125 KGMEYLGSRRCVHRDLAARN---ILVESEAHVKIADFGLAKLL 164
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 15/150 (10%)
Query: 33 LGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSGQPNIVEL 92
+GRG +G + A K + K + +++ ++ +R S P IV+
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEK-EQKQLLMDLDVVMRS--SDCPYIVQF 86
Query: 93 KSAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAP------VLRAIVNAVN-VCHS 145
A E + MEL FD+ Y D P + A V A+N + +
Sbjct: 87 YGALFREGDCWICMELMSTS--FDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 146 MGVMHRDLKPENFCFISRDDNALLKVTDFG 175
+ ++HRD+KP N I D + +K+ DFG
Sbjct: 145 LKIIHRDIKPSN---ILLDRSGNIKLCDFG 171
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
K VE L E+ K F I + ++G +S EL + +G T +++++++ D
Sbjct: 6 KAAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQK 291
DG+G +D+ EF ++ K
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMK 86
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
H + LG+G FG LC + K+ + + +REIQI + L
Sbjct: 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 83
Query: 86 QPNIVELK--SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
IV+ + S ++ +VME G L D + + + + DA+ R ++ + +C
Sbjct: 84 D-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDAS---RLLLYSSQIC 137
Query: 144 HSM------GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
M +HRDL N I + A +K+ DFG A L
Sbjct: 138 KGMEYLGSRRCVHRDLAARN---ILVESEAHVKIADFGLAKLL 177
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
H + LG+G FG LC + K+ + + +REIQI + L
Sbjct: 12 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 71
Query: 86 QPNIVELK--SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
IV+ + S ++ +VME G L D + + + + DA+ R ++ + +C
Sbjct: 72 D-FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDAS---RLLLYSSQIC 125
Query: 144 HSM------GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
M +HRDL N I + A +K+ DFG A L
Sbjct: 126 KGMEYLGSRRCVHRDLAARN---ILVESEAHVKIADFGLAKLL 165
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 6/97 (6%)
Query: 104 VVMELCQGGDLFDRI-IAKGYYSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFIS 162
+V + C+G L+ + + + + + R ++ H+ ++HRD+K N I
Sbjct: 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNN---IF 164
Query: 163 RDDNALLKVTDFGSALLFEEEGG--EASDDTSVILRM 197
+ +K+ DFG A + G + T +L M
Sbjct: 165 LHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWM 201
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRA---GLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+K+ F +D DK+G + DEL + G + L+ + K LM A D DG+G I EF
Sbjct: 43 VKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 283 T 283
+
Sbjct: 103 S 103
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRA---GLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+K+ F +D DK+G + DEL + G + L+ + K LM A D DG+G I EF
Sbjct: 7 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 66
Query: 283 T 283
+
Sbjct: 67 S 67
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRA---GLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+K+ F +D DK+G + DEL + G + L+ + K LM A D DG+G I EF
Sbjct: 43 VKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEF 102
Query: 283 T 283
+
Sbjct: 103 S 103
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 35/75 (46%)
Query: 217 YLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGA 276
+L E K F D D G +S L + +G T+ ++ ++E D DG+G
Sbjct: 13 FLSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 277 IDYTEFTAATIQRQK 291
ID+ EF +++ K
Sbjct: 73 IDFEEFLVMMVRQMK 87
>pdb|3OPB|A Chain A, Crystal Structure Of She4p
pdb|3OPB|B Chain B, Crystal Structure Of She4p
Length = 778
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 328 VSHIYTDKAKKFGLGNTKQFRAMNMLKKLVLQGDIDGNGNIDFIEFVNLMTDIY-----K 382
+SH T AK F L N + R N+L KL+ D++ + I F N+ T I
Sbjct: 634 MSHPLTIAAKFFNLENPQSLRNFNILVKLLQLSDVESQRAVAAI-FANIATTIPLIAKEL 692
Query: 383 LETPELLEKAFQ 394
L EL+E A Q
Sbjct: 693 LTKKELIENAIQ 704
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 212 KVIVEYLPGEETQALKEKF-IEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAAD 270
K VE L E+ K F I + ++G +S EL + +G T +++++++ D
Sbjct: 6 KAAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVD 65
Query: 271 MDGNGAIDYTEFTAATIQRQK 291
DG+G +D+ EF ++ K
Sbjct: 66 EDGSGTVDFDEFLVMMVRCMK 86
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 33.1 bits (74), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 17/163 (10%)
Query: 26 HYSFGRMLGRGRFGVTYLCTENSTNMPYACKSMAKKPKMKYAENDMMIRREIQIRRLLSG 85
H + LG+G FG LC + K+ + + +REIQI + L
Sbjct: 8 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS 67
Query: 86 QPNIVELK--SAHEDETAVHVVMELCQGGDLFDRIIAKGYYSERDAAPVLRAIVNAVNVC 143
IV+ + S + +VME G L D + + + DA+ R ++ + +C
Sbjct: 68 D-FIVKYRGVSYGPGRPELRLVMEYLPSGCLRD--FLQRHRARLDAS---RLLLYSSQIC 121
Query: 144 HSM------GVMHRDLKPENFCFISRDDNALLKVTDFGSALLF 180
M +HRDL N I + A +K+ DFG A L
Sbjct: 122 KGMEYLGSRRCVHRDLAARN---ILVESEAHVKIADFGLAKLL 161
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 6/116 (5%)
Query: 59 AKKPKMKYAENDMM--IRREIQIRRLLSGQPNIVELKSAHEDETAVHVVMELCQGGDLFD 116
++ ++ N+M+ ++ E+ + +L + PNIV ++ + + VV G D
Sbjct: 57 VRRINLEACSNEMVTFLQGELHVSKLFN-HPNIVPYRATFIADNELWVVTSFMAYGSAKD 115
Query: 117 RIIAKGY--YSERDAAPVLRAIVNAVNVCHSMGVMHRDLKPENFCFISRDDNALLK 170
I +E A +L+ ++ A++ H MG +HR +K + IS D L
Sbjct: 116 LICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHI-LISVDGKVYLS 170
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 224 QALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGNGAIDYTEFT 283
QA+ ++F DTD++GT+ EL G L E ++ D +G +D+ F
Sbjct: 91 QAIYKQF---DTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYS-DESGNMDFDNFI 146
Query: 284 AATIQRQKLERSEYLSKAFQYFDKDNSG 311
+ + R + + +AF+ DKD +G
Sbjct: 147 SCLV------RLDAMFRAFKSLDKDGTG 168
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 215 VEYLPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGSMLTEFDVKQLMEAADMDGN 274
+E G+ + L F D + +G + +EL L G + E D++ LM+ +D + +
Sbjct: 1 MEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNND 60
Query: 275 GAIDYTEF 282
G ID+ EF
Sbjct: 61 GRIDFDEF 68
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Query: 226 LKEKFIEMDTDKNGTLSYDELRAGL---TKVGSMLTEFDVKQLMEAADMDGNGAIDYTEF 282
+K+ F +D DK+G + DEL+ L + LT+ + K + D DG+G I EF
Sbjct: 43 VKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEF 102
Query: 283 TA 284
A
Sbjct: 103 AA 104
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 33.1 bits (74), Expect = 0.35, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 218 LPGEETQALKEKFIEMDTDKNGTLSYDELRAGLTKVGS---MLTEFDVKQLMEAADMDGN 274
L + +K+ F + DK+G + DEL+ L + LT+ + K ++A D DG+
Sbjct: 35 LTSKSADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGD 94
Query: 275 GAIDYTEFTA 284
G I ++TA
Sbjct: 95 GKIGVDDWTA 104
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,576,310
Number of Sequences: 62578
Number of extensions: 532678
Number of successful extensions: 4162
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 820
Number of HSP's successfully gapped in prelim test: 377
Number of HSP's that attempted gapping in prelim test: 1673
Number of HSP's gapped (non-prelim): 1806
length of query: 436
length of database: 14,973,337
effective HSP length: 102
effective length of query: 334
effective length of database: 8,590,381
effective search space: 2869187254
effective search space used: 2869187254
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)