Query 042401
Match_columns 126
No_of_seqs 149 out of 1038
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 09:51:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042401.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042401hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aiw_A Golgi-associated plant 100.0 1.4E-34 4.7E-39 199.0 10.4 98 27-125 8-125 (154)
2 1cfe_A Pathogenesis-related pr 100.0 2.7E-33 9.2E-38 188.6 9.6 96 27-125 2-115 (135)
3 1xta_A Natrin 1; crisp, serine 100.0 2.5E-28 8.4E-33 176.5 10.5 95 27-125 13-137 (221)
4 2ddb_A Pseudecin, channel bloc 100.0 1.4E-28 4.8E-33 176.6 9.0 95 27-125 4-128 (210)
5 3q2u_A Glioma pathogenesis-rel 100.0 3E-28 1E-32 173.8 10.3 94 27-124 17-143 (205)
6 1qnx_A VES V 5, antigen 5; all 99.9 8E-28 2.7E-32 172.2 8.8 94 27-125 44-183 (209)
7 1u53_A Secreted protein Asp-2; 99.9 3.7E-27 1.3E-31 167.1 9.6 96 23-124 12-155 (196)
8 2vzn_A Venom allergen 3; major 99.9 6.5E-27 2.2E-31 168.5 9.8 93 27-124 41-183 (218)
9 3u3l_C Tablysin 15; CAP domain 99.9 1.7E-26 5.7E-31 167.7 8.6 94 27-125 39-178 (233)
10 3nt8_A Ancylostoma secreted pr 99.9 2.5E-26 8.6E-31 179.0 9.4 93 27-124 35-169 (424)
11 3nt8_A Ancylostoma secreted pr 99.9 1.4E-24 4.8E-29 169.1 9.5 95 27-125 236-380 (424)
12 3s6s_A AC-Asp-7; pathogenesis- 99.9 8.5E-24 2.9E-28 151.2 8.0 90 27-123 17-125 (206)
13 4ifa_A Extracellular protein c 99.8 6.2E-20 2.1E-24 139.6 9.6 91 27-120 219-328 (339)
14 4h0a_A Uncharacterized protein 99.7 1.4E-16 4.6E-21 120.7 9.5 91 27-120 204-312 (323)
15 3plv_C 66 kDa U4/U6.U5 small n 75.2 2.4 8.2E-05 18.7 2.0 16 33-49 4-19 (21)
16 3ukw_C Bimax1 peptide; arm rep 54.3 4.7 0.00016 18.4 0.9 14 40-54 4-17 (28)
17 2j4t_A Angiogenin-4; angiogene 49.4 7.5 0.00026 25.5 1.6 22 15-36 15-36 (144)
18 4e17_B Catenin alpha-1; four h 21.6 73 0.0025 16.2 2.2 17 27-43 12-28 (40)
No 1
>4aiw_A Golgi-associated plant pathogenesis-related prote; lipid-binding protein, golgi apparatus, myristate; HET: I6P; 1.50A {Homo sapiens} PDB: 1smb_A*
Probab=100.00 E-value=1.4e-34 Score=198.96 Aligned_cols=98 Identities=28% Similarity=0.557 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCccCCHHHHHHHHHHHHhhcccCccccCC----CCccceeeeecCCCcHHHHHHHHh--
Q 042401 27 ATQQRYVHLHNEAPRNVGIGIGMTWDKTLEDHSHSYALKLKVDCIIEHSI----RHYGKNLGWADYDFTVDHIVKMWM-- 100 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~----~~~Geni~~~~~~~~~~~~v~~W~-- 100 (126)
+++++||+.||++|+.|++| ||+||++|++.||.||++++..|.+.|++ +.+||||+++..+.++.++|+.||
T Consensus 8 ~f~~~iL~~HN~~R~~~~~~-~L~wd~~La~~Aq~~A~~~a~~~~~~hs~~~~~~~~GeNl~~~~~~~~~~~~v~~W~~E 86 (154)
T 4aiw_A 8 QFHNEVLKAHNEYRQKHGVP-PLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWASYDQTGKEVADRWYSE 86 (154)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-CCEECHHHHHHHHHHHHHHHHHTCCCCCHHHHTTSSEEEEEEESSCCCHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHHcCCC-cccccHHHHHHHHHHHHHhhhcccccccccCCCCCCCeeeEecCCCCCHHHHHHHHHHH
Confidence 78999999999999999999 99999999999999999999999999974 578999998876668999999999
Q ss_pred --------------hhHHHHHHhhhcceeeEEEEEcCCC
Q 042401 101 --------------CGHYTQVVWRKSVGLGCAKERCNNN 125 (126)
Q Consensus 101 --------------~~h~tqmvw~~t~~vGCa~~~c~~g 125 (126)
+||||||||++|++||||++.|++|
T Consensus 87 ~~~y~~~~~~~~~~~gHfTQ~VW~~t~~vGCg~a~c~~~ 125 (154)
T 4aiw_A 87 IKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDG 125 (154)
T ss_dssp GGGCCTTSCSCCTTTHHHHHHHCTTCCEEEEEEEECTTS
T ss_pred hhhcccCCCCcCCCcCCeeeeehhhhceeeeEEEEcCCC
Confidence 7999999999999999999999875
No 2
>1cfe_A Pathogenesis-related protein P14A; PR-1 proteins, plant defense; NMR {Solanum lycopersicum} SCOP: d.111.1.1
Probab=100.00 E-value=2.7e-33 Score=188.62 Aligned_cols=96 Identities=46% Similarity=0.865 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCccCCHHHHHHHHHHHHhhcccCccccCCCCccceeeeecCCCcHHHHHHHHh------
Q 042401 27 ATQQRYVHLHNEAPRNVGIGIGMTWDKTLEDHSHSYALKLKVDCIIEHSIRHYGKNLGWADYDFTVDHIVKMWM------ 100 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~~~~Geni~~~~~~~~~~~~v~~W~------ 100 (126)
++++++|+.||++|+.++++ ||+||++|++.||.||++|+..|.+.|+++ ||||+++.++.++.++|+.|+
T Consensus 2 ~~~~~iL~~HN~~R~~~~~~-~L~Wd~~La~~Aq~~A~~~a~~c~~~hs~~--GENla~~~~~~~~~~~v~~W~~E~~~y 78 (135)
T 1cfe_A 2 NSPQDYLAVHNDARAQVGVG-PMSWDANLASRAQNYANSRAGDCNLIHSGA--GENLAKGGGDFTGRAAVQLWVSERPSY 78 (135)
T ss_dssp CSHHHHHHHHHHHHHHTTCC-CCEECSHHHHHHHHHHHHHTTTCCSCSCSS--SBCCEECSSSCCHHHHHHHHHTTGGGE
T ss_pred cHHHHHHHHHHHHHHHcCCC-ccCcCHHHHHHHHHHHHHHhcCCCcccCCC--CeEEEEecCCCCHHHHHHHHHhHHhhC
Confidence 46899999999999999999 999999999999999999999999999886 999998774458999999999
Q ss_pred ------------hhHHHHHHhhhcceeeEEEEEcCCC
Q 042401 101 ------------CGHYTQVVWRKSVGLGCAKERCNNN 125 (126)
Q Consensus 101 ------------~~h~tqmvw~~t~~vGCa~~~c~~g 125 (126)
++|||||||++|++||||++.|++|
T Consensus 79 ~~~~~~~~~~~~~gHfTQ~vW~~t~~vGCa~~~c~~~ 115 (135)
T 1cfe_A 79 NYATNQCVGGKKCRHYTQVVWRNSVRLGCGRARCNNG 115 (135)
T ss_dssp EGGGTEECSSSCCSSHHHHHCTTCCEEEEEEEECTTS
T ss_pred CCCCCCcCCCCcccceeeeEEccCcEEeEEEEEeCCC
Confidence 5899999999999999999999764
No 3
>1xta_A Natrin 1; crisp, serine protease, ION channel blocking, cobra, toxin; 1.58A {Naja atra} PDB: 2giz_A 1xx5_A 3mz8_A 1rc9_A 1wvr_A
Probab=99.95 E-value=2.5e-28 Score=176.48 Aligned_cols=95 Identities=29% Similarity=0.583 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHhhhhcCCC----CCccCCHHHHHHHHHHHHhhcccCccccCCC--------CccceeeeecCCCcHHH
Q 042401 27 ATQQRYVHLHNEAPRNVGIG----IGMTWDKTLEDHSHSYALKLKVDCIIEHSIR--------HYGKNLGWADYDFTVDH 94 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~~~----~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~~--------~~Geni~~~~~~~~~~~ 94 (126)
+++++||+.||++|+.++++ .+|+||++||+.||.||+ +|.+.|++. .+||||+++....+..+
T Consensus 13 ~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~~~ 88 (221)
T 1xta_A 13 KKQKEIVDLHNSLRRRVSPTASNMLKMEWYPEAASNAERWAN----TCSLNHSPDNLRVLEGIQCGESIYMSSNARTWTE 88 (221)
T ss_dssp HHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGCEETTEECEEEEEEESSCCCHHH
T ss_pred HHHHHHHHHHHHHHHhcCCccccCccCccCHHHHHHHHHHHh----cCCCCCcCccccccCCCCCceEEEeecCCCCHHH
Confidence 78999999999999999754 389999999999999999 999999853 48999998775557899
Q ss_pred HHHHHh------------------hhHHHHHHhhhcceeeEEEEEcCCC
Q 042401 95 IVKMWM------------------CGHYTQVVWRKSVGLGCAKERCNNN 125 (126)
Q Consensus 95 ~v~~W~------------------~~h~tqmvw~~t~~vGCa~~~c~~g 125 (126)
+|+.|| +||||||||+++++||||++.|+++
T Consensus 89 av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~ 137 (221)
T 1xta_A 89 IIHLWHDEYKNFVYGVGASPPGSVTGHYTQIVWYQTYRAGCAVSYCPSS 137 (221)
T ss_dssp HHHHHHGGGGGEETTTEESSTTCCCHHHHHHTCTTCCEEEEEEEECTTS
T ss_pred HHHHHHHHHHhcCCCCCCCCCCCchhHHHHHHHHhcCEeeEEEEEcCCC
Confidence 999998 6899999999999999999999864
No 4
>2ddb_A Pseudecin, channel blocker; crisp, snake venom, CNG channel, toxin; 1.90A {Pseudechis porphyriacus} PDB: 2epf_A 2dda_A
Probab=99.95 E-value=1.4e-28 Score=176.55 Aligned_cols=95 Identities=33% Similarity=0.612 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHhhhhcCCC----CCccCCHHHHHHHHHHHHhhcccCccccCCC--------CccceeeeecCCCcHHH
Q 042401 27 ATQQRYVHLHNEAPRNVGIG----IGMTWDKTLEDHSHSYALKLKVDCIIEHSIR--------HYGKNLGWADYDFTVDH 94 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~~~----~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~~--------~~Geni~~~~~~~~~~~ 94 (126)
+++++||+.||++|+.++++ .+|+||++||+.||.||+ +|.+.|++. .+||||+++....+..+
T Consensus 4 ~~~~~iL~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~Hs~~~~r~~~~~~~GENl~~~~~~~~~~~ 79 (210)
T 2ddb_A 4 NYQKEIVDKHNALRRSVKPTARNMLQMKWNSHAAQNAKRWAD----RCTFAHSPPNTRTVGKLRCGENIFMSSQPFPWSG 79 (210)
T ss_dssp CHHHHHHHHHHHHHTTCSSCBSSCBCCEECHHHHHHHHHHHT----TTCCSCCCGGGSEETTEECEEEEEEESSCCCHHH
T ss_pred HHHHHHHHHHHHHHHHcCCccccCcccccCHHHHHHHHHHHh----cCCCCCCCccccccCCCCCcceEEEEcCCCCHHH
Confidence 57899999999999999754 379999999999999999 999999853 48999998775557899
Q ss_pred HHHHHh------------------hhHHHHHHhhhcceeeEEEEEcCCC
Q 042401 95 IVKMWM------------------CGHYTQVVWRKSVGLGCAKERCNNN 125 (126)
Q Consensus 95 ~v~~W~------------------~~h~tqmvw~~t~~vGCa~~~c~~g 125 (126)
+|+.|| ++|||||||+++++||||++.|+++
T Consensus 80 av~~W~~E~~~y~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~ 128 (210)
T 2ddb_A 80 VVQAWYDEIKNFVYGIGAKPPGSVIGHYTQVVWYKSHLIGCASAKCSSS 128 (210)
T ss_dssp HHHHHHGGGGGEETTTEESSTTSCCHHHHHHTCTTCCEEEEEEEEEETT
T ss_pred HHHHHHHHhhhCCCCCCCCCCCCcccchhhhhhhhccEeeEEEEEcCCC
Confidence 999999 6899999999999999999999764
No 5
>3q2u_A Glioma pathogenesis-related protein 1; crisp, membrane protein; 1.85A {Homo sapiens} PDB: 3q2r_A
Probab=99.95 E-value=3e-28 Score=173.78 Aligned_cols=94 Identities=33% Similarity=0.644 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHhhhhcCCC----CCccCCHHHHHHHHHHHHhhcccCccccCC------------CCccceeeeecC-C
Q 042401 27 ATQQRYVHLHNEAPRNVGIG----IGMTWDKTLEDHSHSYALKLKVDCIIEHSI------------RHYGKNLGWADY-D 89 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~~~----~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~------------~~~Geni~~~~~-~ 89 (126)
+++++||+.||.+|+.++++ .+|+||++||+.||.||+ +|.+.|++ +.+||||+.+.. .
T Consensus 17 ~f~~~~L~~HN~~R~~~~~~A~nM~~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~~~~~~~GeNl~~~~~~~ 92 (205)
T 3q2u_A 17 DFIKDCVRIHNKFRSEVKPTASDMLYMTWDPALAQIAKAWAS----NCQFSHNTRLKPPHKLHPNFTSLGENIWTGSVPI 92 (205)
T ss_dssp HHHHHHHHHHHHHHHTCSSCBSSCBCCEECHHHHHHHHHHHT----TCBSSCCTTSSTTCCSSTTCSSCEEEEEEEETTT
T ss_pred HHHHHHHHHHHHHHHhcCCCcccCccCccCHHHHHHHHHHHH----hCCCCCCccccccccccCCCCCCceEEEEccCCC
Confidence 79999999999999999754 279999999999999999 89988864 368999998764 4
Q ss_pred CcHHHHHHHHh----------------hhHHHHHHhhhcceeeEEEEEcCC
Q 042401 90 FTVDHIVKMWM----------------CGHYTQVVWRKSVGLGCAKERCNN 124 (126)
Q Consensus 90 ~~~~~~v~~W~----------------~~h~tqmvw~~t~~vGCa~~~c~~ 124 (126)
+++.++|+.|| ++|||||||++|++||||++.|++
T Consensus 93 ~~~~~~v~~W~~E~~~y~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~ 143 (205)
T 3q2u_A 93 FSVSSAITNWYDEIQDYDFKTRICKKVCGHYTQVVWADSYKVGCAVQFCPK 143 (205)
T ss_dssp CCHHHHHHHHHGGGGGEETTTTEESSCCHHHHHHTCTTCCEEEEEEEEESC
T ss_pred CCHHHHHHHHHhHHHhcCCCCCCccchhHHHHHHHhhcccEeeeEEEEcCC
Confidence 68899999999 699999999999999999999975
No 6
>1qnx_A VES V 5, antigen 5; allergen, vespid venom; 1.90A {Vespula vulgaris} SCOP: d.111.1.1
Probab=99.95 E-value=8e-28 Score=172.21 Aligned_cols=94 Identities=24% Similarity=0.516 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHhhhhcC-----------------CCCCccCCHHHHHHHHHHHHhhcccCccccCC------CCcccee
Q 042401 27 ATQQRYVHLHNEAPRNVG-----------------IGIGMTWDKTLEDHSHSYALKLKVDCIIEHSI------RHYGKNL 83 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~-----------------~~~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~------~~~Geni 83 (126)
++++.||+.||++|+.++ ++ +|+||++||..||.||+ +|.+.|++ ..+||||
T Consensus 44 ~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~-~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~~~GeNl 118 (209)
T 1qnx_A 44 QEKQDILKEHNDFRQKIARGLETRGNPGPQPPAKNMK-NLVWNDELAYVAQVWAN----QCQYGHDTCRDVAKYQVGQNV 118 (209)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCSTTCCCCCBSSCC-CCEECHHHHHHHHHHHT----TCCCSCCSCCCCSSSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCccccCCCCCCCcccccc-ccccCHHHHHHHHHHHh----cCcccCCCccCCCCCCCccEE
Confidence 679999999999999983 56 89999999999999999 89999974 1489999
Q ss_pred eeecC----CCcHHHHHHHHh-------------------hhHHHHHHhhhcceeeEEEEEcCCC
Q 042401 84 GWADY----DFTVDHIVKMWM-------------------CGHYTQVVWRKSVGLGCAKERCNNN 125 (126)
Q Consensus 84 ~~~~~----~~~~~~~v~~W~-------------------~~h~tqmvw~~t~~vGCa~~~c~~g 125 (126)
+++.. ..++.++|+.|| ++|||||||++|++||||++.|.++
T Consensus 119 ~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~ 183 (209)
T 1qnx_A 119 ALTGSTAAKYDDPVKLVKMWEDEVKDYNPKKKFSGNDFLKTGHYTQMVWANTKEVGCGSIKYIQE 183 (209)
T ss_dssp EEEEESSSCCCCHHHHHHHHHGGGGGCCTTSCGGGSCHHHHHHHHHHTCTTCCEEEEEEEEEEET
T ss_pred EEecccCCCcccHHHHHHHHHHhhhhcCCccCCCCCCCCcccchhhhhhhcCcEeeeEEEEEeCC
Confidence 98653 236889999998 6899999999999999999999754
No 7
>1u53_A Secreted protein Asp-2; antibiotic; 1.56A {Necator americanus}
Probab=99.94 E-value=3.7e-27 Score=167.12 Aligned_cols=96 Identities=30% Similarity=0.641 Sum_probs=82.4
Q ss_pred ccChHHHHHHHHHHHHhhhhcC-----------------CCCCccCCHHHHHHHHHHHHhhcccCccccCC----CCccc
Q 042401 23 SANNATQQRYVHLHNEAPRNVG-----------------IGIGMTWDKTLEDHSHSYALKLKVDCIIEHSI----RHYGK 81 (126)
Q Consensus 23 ~a~~~~~~~il~~hN~~R~~~~-----------------~~~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~----~~~Ge 81 (126)
++. ++++.||+.||++|+.++ ++ +|+||++||+.||.||+ +|.+.|++ ..+||
T Consensus 12 lt~-~~~~~iL~~HN~~R~~~a~G~~~~~~g~~~p~A~nM~-~L~Wd~~La~~Aq~~A~----~C~~~h~~~~~~~~~Ge 85 (196)
T 1u53_A 12 MSE-EARQKFLEMHNSLRSSVALGQAKDGAGGNAPKAAKMK-TMAYDCEVEKTAMNNAK----QCVFKHSQPNQRKGLGE 85 (196)
T ss_dssp CCH-HHHHHHHHHHHHHHHHHHTTCCBCTTSSBCCCBSSCB-CCEECHHHHHHHHHHHT----TCCCCCCCGGGSTTCEE
T ss_pred CCH-HHHHHHHHHHHHHHHHHhCCCcccCCCCcCCccccch-hcccCHHHHHHHHHHHH----hCccCCCccccCCCCCe
Confidence 444 789999999999999983 34 89999999999999999 99999973 36899
Q ss_pred eeeeecCCC-----cHHHHHHHHh----------------------hhHHHHHHhhhcceeeEEEEEcCC
Q 042401 82 NLGWADYDF-----TVDHIVKMWM----------------------CGHYTQVVWRKSVGLGCAKERCNN 124 (126)
Q Consensus 82 ni~~~~~~~-----~~~~~v~~W~----------------------~~h~tqmvw~~t~~vGCa~~~c~~ 124 (126)
||+++.+.. .+.++|+.|| ++|||||||+++++||||++.|.+
T Consensus 86 Nl~~~~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~ghfTQ~VW~~t~~vGCa~~~c~~ 155 (196)
T 1u53_A 86 NIFMSSDSGMDKAKAAEQASKAWFGELAEKGVGQNLKLTGGLFSRGVGHYTQMVWQETVKLGCYVEACSN 155 (196)
T ss_dssp EEEEESCTTCCHHHHHHHHHHHHHTHHHHHCCCSCCBCCHHHHTTTCHHHHHHTCTTCCEEEEEEEECSS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHcCCCcccccCccccCccccchheeeecccCEEeeEEEEeCC
Confidence 999765421 3589999998 589999999999999999999964
No 8
>2vzn_A Venom allergen 3; major FIRE ANT allergen, SOL I 3, secreted, cross- reactivity; 3.05A {Solenopsis invicta}
Probab=99.94 E-value=6.5e-27 Score=168.50 Aligned_cols=93 Identities=30% Similarity=0.624 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHhhhhcC-----------------CCCCccCCHHHHHHHHHHHHhhcccCccccCC------CCcccee
Q 042401 27 ATQQRYVHLHNEAPRNVG-----------------IGIGMTWDKTLEDHSHSYALKLKVDCIIEHSI------RHYGKNL 83 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~-----------------~~~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~------~~~Geni 83 (126)
+++++||+.||++|+.++ ++ +|+||++||+.||.||+ +|.+.|++ ..+||||
T Consensus 41 ~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~~m~-~L~Wd~~La~~Aq~~A~----~C~~~Hs~c~~~~~~~~GeNl 115 (218)
T 2vzn_A 41 AEKDAIVNKHNELRQRVASGKEMRGTNGPQPPAVKMP-NLTWDPELATIAQRWAN----QCTFEHDACRNVERFAVGQNI 115 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCTTSCCCCBSCCC-CCEECHHHHHHHHHHHT----TCCSSCCSCCCCSSSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCCCCCCchhhch-hccCCHHHHHHHHHHHH----hCCcCCCCCCCCccCCCceEE
Confidence 679999999999999983 46 89999999999999999 89999975 2489999
Q ss_pred eeecC----CCcHHHHHHHHh-----------------------hhHHHHHHhhhcceeeEEEEEcCC
Q 042401 84 GWADY----DFTVDHIVKMWM-----------------------CGHYTQVVWRKSVGLGCAKERCNN 124 (126)
Q Consensus 84 ~~~~~----~~~~~~~v~~W~-----------------------~~h~tqmvw~~t~~vGCa~~~c~~ 124 (126)
+++.. .....++|+.|| ++|||||||++|++||||++.|.+
T Consensus 116 ~~~~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~ 183 (218)
T 2vzn_A 116 AATSSSGKNKSTPNEMILLWYNEVKDFDNRWISSFPSDDNILMKVGHYTQIVWAKTTKIGCGRIMFKE 183 (218)
T ss_dssp EEEEECC-CCCCHHHHHHHHHGGGGGCCGGGSSSCCCCHHHHHHHHHHHHHTCTTCCEEEEEEEEEEC
T ss_pred EEEeccCCccchHHHHHHHHHHHHHhcCcccccCCCCCcccCCCcchHHHHHHHhcCEEeEEEEEEeC
Confidence 98653 125679999998 369999999999999999999975
No 9
>3u3l_C Tablysin 15; CAP domain, alphavbeta3 integrin, salivary gland, protein BI; HET: PLM CIT; 1.57A {Tabanus yao} PDB: 3u3n_C* 3u3u_C*
Probab=99.93 E-value=1.7e-26 Score=167.75 Aligned_cols=94 Identities=15% Similarity=0.176 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHhhhhc-----------CCCCCccCCHHHHHHHHHHHHhhcccCccccCC----C---CccceeeeecC
Q 042401 27 ATQQRYVHLHNEAPRNV-----------GIGIGMTWDKTLEDHSHSYALKLKVDCIIEHSI----R---HYGKNLGWADY 88 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~-----------~~~~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~----~---~~Geni~~~~~ 88 (126)
++++.||+.||++|+.+ .++ +|+||++||..||.||+ +|.+.|++ . .+|||++...+
T Consensus 39 ~~~~~il~~HN~~R~~va~G~~~~P~A~nM~-~L~Wd~~La~~Aq~~a~----~C~~~h~~c~~~~~~~~~Gen~~~~~~ 113 (233)
T 3u3l_C 39 EHRNEILSKINDVRDHVAKGSWGLPVAARMK-VVVWDAELAGLAKRHTK----GCVGETHACRNTERFWLPGQLNFKYSG 113 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCCBSSCB-CCEECHHHHHHHHHHHT----TCCSCCCCBCCCSSCSSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCccccCC-ccEECHHHHHHHHHHHH----hCCCCCCcccccCcCCcCeEEEEEecC
Confidence 78999999999999999 467 99999999999999999 99999875 2 58999876543
Q ss_pred C--C----cHHHHHHHHh----------------------hhHHHHHHhhhcceeeEEEEEcCCC
Q 042401 89 D--F----TVDHIVKMWM----------------------CGHYTQVVWRKSVGLGCAKERCNNN 125 (126)
Q Consensus 89 ~--~----~~~~~v~~W~----------------------~~h~tqmvw~~t~~vGCa~~~c~~g 125 (126)
. . ...++|+.|| ++|||||||++|++||||++.|+++
T Consensus 114 ~~~~~~~~~~~~av~~W~~E~~~y~~~~~~~~~~~~~~~~~gHfTQmVW~~t~~vGCa~~~c~~~ 178 (233)
T 3u3l_C 114 DKLPRIKELIDDAVKKGHLQKHNITREIIENYRENGPNGDVKELALAISDRVTAVGCGLTTWEDG 178 (233)
T ss_dssp SSCCCHHHHHHHHHHHHHGGGGTCCHHHHHSCCSCC--CCCHHHHHHTCTTCCEEEEEEEEEEET
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhhCHHHHhcCCCcccccchhhhHHHhhhcCCeeeeEEEEEEcC
Confidence 1 1 2588999998 6899999999999999999999754
No 10
>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}
Probab=99.93 E-value=2.5e-26 Score=178.97 Aligned_cols=93 Identities=22% Similarity=0.442 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHhhhhc--C--------------CCCCccCCHHHHHHHHHHHHhhcccCccccCC-CCccceeeeecC-
Q 042401 27 ATQQRYVHLHNEAPRNV--G--------------IGIGMTWDKTLEDHSHSYALKLKVDCIIEHSI-RHYGKNLGWADY- 88 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~--~--------------~~~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~-~~~Geni~~~~~- 88 (126)
++++.||+.||++|+.+ | ++ +|+||++||..||.||+ +|.+.|+. ..+|||++....
T Consensus 35 ~~~~~il~~HN~~R~~~A~G~~~~~~~~~p~A~nM~-~L~Wd~eLa~~Aq~~a~----~C~~~h~~~~~~GeNl~~~~~~ 109 (424)
T 3nt8_A 35 SDRQAFLDFHNNARRRVAKGLEDSNSGKLNPAKNMY-KLSWDCAMEQQLQDAIQ----SCPSGFAGIQGVAQNTMSWSSS 109 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCBCSSSBCCCEESCB-CCEECHHHHHHHHHHCT----TCCSSCCCCTTCEEEEEEEECT
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCCCcccccCC-ccccCHHHHHHHHHHHh----hCCCcCCCCCCceeeEEecccc
Confidence 68999999999999999 3 34 79999999999999999 99999876 479999987652
Q ss_pred ----C--CcHHHHHHHHh------------------hhHHHHHHhhhcceeeEEEEEcCC
Q 042401 89 ----D--FTVDHIVKMWM------------------CGHYTQVVWRKSVGLGCAKERCNN 124 (126)
Q Consensus 89 ----~--~~~~~~v~~W~------------------~~h~tqmvw~~t~~vGCa~~~c~~ 124 (126)
+ ....++|+.|| ++|||||||+++++||||++.|++
T Consensus 110 ~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~ghfTqmvw~~t~~vGCa~~~c~~ 169 (424)
T 3nt8_A 110 GGYPDPSVKIEPTLSGWWSGAKKNGVGPDNKYTGGGLFAFSNMVYSETTKLGCAYKVCGT 169 (424)
T ss_dssp TCCSCGGGGHHHHHHHHHTHHHHHCCCTTCBCCCTTCHHHHHHHCTTCCEEEEEEEEETT
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHcCCcccccCCCcchHHHHHHHHHhcCeeceEEEEeCC
Confidence 1 13789999998 679999999999999999999964
No 11
>3nt8_A Ancylostoma secreted protein 1; pathogenesis related-1 protein, cysteine-rich secretory PROT domain, immune system; 2.20A {Necator americanus}
Probab=99.91 E-value=1.4e-24 Score=169.12 Aligned_cols=95 Identities=26% Similarity=0.516 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHhhhhcCC-----------C-----CCccCCHHHHHHHHHHHHhhcccCccccCCC----Cccceeeee
Q 042401 27 ATQQRYVHLHNEAPRNVGI-----------G-----IGMTWDKTLEDHSHSYALKLKVDCIIEHSIR----HYGKNLGWA 86 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~~-----------~-----~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~~----~~Geni~~~ 86 (126)
++++.||+.||++|+.++. | .+|+||++||+.||.||+ +|.+.|++. .+||||++.
T Consensus 236 ~~~~~iL~~HN~~R~~~a~G~~~~~~~~~~p~A~nM~~L~Wd~~La~~Aq~~a~----~C~~~h~~~~~~~~~GeNl~~~ 311 (424)
T 3nt8_A 236 SVRDTFLSVHNEFRSSVARGLEPDALGGNAPKAAKMLKMVYDCEVEASAIRHGN----KCVYQHSHGEDRPGLGENIYKT 311 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSBCTTSSBCCCBSSCBCCEECHHHHHHHHHHHT----TCCSSCCCTTTSTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCCCCchhceEhHHHHHHHHHHHH----hCcccCCCccccCccceeEEec
Confidence 7899999999999999862 2 379999999999999999 999999753 699999987
Q ss_pred cC-C----CcHHHHHHHHh-------------------------hhHHHHHHhhhcceeeEEEEEcCCC
Q 042401 87 DY-D----FTVDHIVKMWM-------------------------CGHYTQVVWRKSVGLGCAKERCNNN 125 (126)
Q Consensus 87 ~~-~----~~~~~~v~~W~-------------------------~~h~tqmvw~~t~~vGCa~~~c~~g 125 (126)
.. . ..+.++|+.|| ++|||||||++|++||||++.|+++
T Consensus 312 ~~~~~~~~~~~~~~v~~W~~E~~~y~~~~~~~~~~~~~~~~~~~~gHfTQ~VW~~t~~vGCa~~~c~~~ 380 (424)
T 3nt8_A 312 SVLKFDKNKAAKQASQLWWNELKEYGVGPSNVLTTALWNRPNMQIGHYTQMAWDTTYKLGCAVVFCNDF 380 (424)
T ss_dssp SSTTCCHHHHHHHHHHHHHTHHHHTCCCTTCBCCHHHHTCTTCCCHHHHHHHCTTCCEEEEEEEECSSS
T ss_pred ccCCCchHHHHHHHHHHHHHHHHhcCCCCCcccccccccCCCCcccchHHHhhhhcceeeeEEEEeCCC
Confidence 54 2 25789999998 4699999999999999999999764
No 12
>3s6s_A AC-Asp-7; pathogenesis-related protein, SCP/TAPS, unknown function; 2.40A {Ancylostoma caninum} PDB: 3s6v_A 3s6u_A
Probab=99.90 E-value=8.5e-24 Score=151.15 Aligned_cols=90 Identities=14% Similarity=0.163 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHhhhhcC------CC-----CCccCCHHHHHHHHHHHHhhcccCccccCCCCccceeeeecC---CCcH
Q 042401 27 ATQQRYVHLHNEAPRNVG------IG-----IGMTWDKTLEDHSHSYALKLKVDCIIEHSIRHYGKNLGWADY---DFTV 92 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~------~~-----~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~~~~Geni~~~~~---~~~~ 92 (126)
++++.||+.||++|+.++ .| ++|+||++||..||.||+ |. .+. ...|||++...+ ....
T Consensus 17 ~~~~~il~~HN~~R~~va~G~~~~~p~A~nM~~l~Wd~eLa~~Aq~~A~-----C~-~~~-~~~GeNl~~~sg~~~~~~~ 89 (206)
T 3s6s_A 17 PFREAIDTFHNGLRQRIAKGEAEGYGPAREMYGLVYDCGLEEEARKEIK-----LP-GYA-DLHHRGVTRFSGDYEGSAI 89 (206)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSTTSCSCCCCBCCEEEHHHHHHHHHHHH-----ST-THH-HHTTCEEEEEEEECSSCHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcchhhcCcCCchHHHHHHHHHhhc-----CC-CCC-CCCCcEEEEecCCCCccch
Confidence 789999999999999975 22 369999999999999997 65 332 223999965432 1223
Q ss_pred --HHHHHHHh---hhHHHHHHhhhcceeeEEEEEcC
Q 042401 93 --DHIVKMWM---CGHYTQVVWRKSVGLGCAKERCN 123 (126)
Q Consensus 93 --~~~v~~W~---~~h~tqmvw~~t~~vGCa~~~c~ 123 (126)
.++|+.|+ ++|||||||++|++||||++.|+
T Consensus 90 ~~~~av~~W~~E~~gHfTQmVW~~Tt~VGCa~~~C~ 125 (206)
T 3s6s_A 90 SALKEILETFSADKNSMRQVVYPKATRFGCSGRLRR 125 (206)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHCTTCCEEEEEEEECC
T ss_pred hHHHHHHHHHhhhhhhHHHHHHHhhceeeEEEEEec
Confidence 48999999 99999999999999999999996
No 13
>4ifa_A Extracellular protein containing A SCP domain; vaccine candi virulence, pathogenesis, center for structural genomics of infectious diseases; HET: MSE; 1.50A {Bacillus anthracis}
Probab=99.81 E-value=6.2e-20 Score=139.62 Aligned_cols=91 Identities=18% Similarity=0.249 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCccCCHHHHHHHHHHHHhhcccCccccCCC-----------------CccceeeeecCC
Q 042401 27 ATQQRYVHLHNEAPRNVGIGIGMTWDKTLEDHSHSYALKLKVDCIIEHSIR-----------------HYGKNLGWADYD 89 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~~-----------------~~Geni~~~~~~ 89 (126)
.+.+++|+.||.+|..+|++ ||+||+.|++.|+.||++|+..|.+.|.++ .+||||+.+..
T Consensus 219 a~e~~vl~lvN~~Ra~~Gl~-pL~~d~~L~~aAq~hA~dMa~~~~fsH~~~~G~~~~~R~~~~G~~~~~~GENIA~G~~- 296 (339)
T 4ifa_A 219 GNMQQIFDLTNIIRSRHNLP-LLAWDQQTADVAIGHSKDMKDNNYFSHDSPTLGTLGDRLQRGKVGFQLAGENIAAQHS- 296 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-CCEECHHHHHHHHHHHHHHHHHTCCSSSBTTTBCHHHHHHHTTCCCSEEEEEEEESCS-
T ss_pred HHHHHHHHHHHHHHHHcCCC-CCccCHHHHHHHHHHHHHHhhcCCeecCCCCCCCHHHHHHHcCCCcCceeEEEEEeCC-
Confidence 46789999999999999999 999999999999999999999999999641 36999999876
Q ss_pred CcHHHHHHHHh--hhHHHHHHhhhcceeeEEEE
Q 042401 90 FTVDHIVKMWM--CGHYTQVVWRKSVGLGCAKE 120 (126)
Q Consensus 90 ~~~~~~v~~W~--~~h~tqmvw~~t~~vGCa~~ 120 (126)
++.++++.|+ .||+++|+|.+.+++|||+.
T Consensus 297 -s~~~av~~WmnSpGHr~NIL~~~~t~iGvGv~ 328 (339)
T 4ifa_A 297 -DGVAALQGWLNSEGHRKNLLNEQFTGLGVGVY 328 (339)
T ss_dssp -SHHHHHHHHHTSHHHHHHHTCTTCCEEEEEEE
T ss_pred -CHHHHHHHHhCCHhHHHHHhCCCCCEEEEEEE
Confidence 8999999999 99999999999999999986
No 14
>4h0a_A Uncharacterized protein; CAP protein family, cysteine-rich secretory proteins, struct genomics, joint center for structural genomics; 1.90A {Staphylococcus aureus subsp}
Probab=99.68 E-value=1.4e-16 Score=120.68 Aligned_cols=91 Identities=14% Similarity=0.163 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHhhhhcCCCCCccCCHHHHHHHHHHHHhhcccCccccCCC----------------CccceeeeecCCC
Q 042401 27 ATQQRYVHLHNEAPRNVGIGIGMTWDKTLEDHSHSYALKLKVDCIIEHSIR----------------HYGKNLGWADYDF 90 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~~~~~~L~Wd~~La~~A~~~A~~~a~~c~~~~~~~----------------~~Geni~~~~~~~ 90 (126)
...++++++.|.+|..+|++ ||+||+.|++.|+.||++|+......|++. ..||||+.++.
T Consensus 204 ~~e~~il~liN~~R~~~GL~-pL~~d~~L~~aA~~ha~dma~~~~~h~~~~g~~~~~R~~~~g~~~~~~gENIA~g~~-- 280 (323)
T 4h0a_A 204 NQLISLYEVTNEMRKLKGLK-PLKINSDLAHIASNNLYEATSNGSDSVEFTEDALRGQLDKNHVTYKTTAQNVGYAFN-- 280 (323)
T ss_dssp HHHHHHHHHHHHHHHHTTCC-CCEECHHHHHHHHHHHHHHTC------CCCHHHHHHHHHHTTCCCSEEEEEEEESCC--
T ss_pred HHHHHHHHHHHHHHHHcCCc-ccCccHhHHHHHHHHHHHHhhCCCCCcCCCCCCHHHHHHHcCCCcCeeeeEEecCCC--
Confidence 45678999999999999999 999999999999999999986544333321 35999999887
Q ss_pred cHHHHHHHHh--hhHHHHHHhhhcceeeEEEE
Q 042401 91 TVDHIVKMWM--CGHYTQVVWRKSVGLGCAKE 120 (126)
Q Consensus 91 ~~~~~v~~W~--~~h~tqmvw~~t~~vGCa~~ 120 (126)
++.++++.|+ .||+.+|+..+.+++|+|+.
T Consensus 281 ~~~~vv~~WmnSpgHR~NiL~~~~t~iGvGv~ 312 (323)
T 4h0a_A 281 DVPTLIHSWMNSDIHRSRLLNSKYDEMGGDVM 312 (323)
T ss_dssp SHHHHHHHHHTSHHHHHHHTCSSCCEEEEEEE
T ss_pred CHHHHHHHHHcCHHHHHHHcCCCCCEEEEEEE
Confidence 8999999999 99999999999999999985
No 15
>3plv_C 66 kDa U4/U6.U5 small nuclear ribonucleoprotein C; ubiquitin-like, peptide binding protein; 1.90A {Saccharomyces cerevisiae}
Probab=75.17 E-value=2.4 Score=18.75 Aligned_cols=16 Identities=19% Similarity=0.297 Sum_probs=13.5
Q ss_pred HHHHHHhhhhcCCCCCc
Q 042401 33 VHLHNEAPRNVGIGIGM 49 (126)
Q Consensus 33 l~~hN~~R~~~~~~~~L 49 (126)
++..|+.|.+.|+. |+
T Consensus 4 iEEtnk~r~~lGLk-pl 19 (21)
T 3plv_C 4 IEETNELRASLGLK-LI 19 (26)
T ss_dssp HHHHHHHHHHTTCC-CC
T ss_pred HHHHHHHHHHcCCC-CC
Confidence 56789999999988 76
No 16
>3ukw_C Bimax1 peptide; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding, protein transport-IN complex; HET: BTB; 2.10A {Mus musculus}
Probab=54.31 E-value=4.7 Score=18.41 Aligned_cols=14 Identities=21% Similarity=0.463 Sum_probs=8.2
Q ss_pred hhhcCCCCCccCCHH
Q 042401 40 PRNVGIGIGMTWDKT 54 (126)
Q Consensus 40 R~~~~~~~~L~Wd~~ 54 (126)
|+..... ||.||++
T Consensus 4 rrrprkr-plewded 17 (28)
T 3ukw_C 4 RRRPRKR-PLEWDED 17 (28)
T ss_dssp ---CCCC-CCCCCGG
T ss_pred ccccccC-Ccccccc
Confidence 3444455 9999975
No 17
>2j4t_A Angiogenin-4; angiogenesis, endonuclease, differentiation, cancer, nuclease, hydrolase, ribonuclease, developmental protein; 2.02A {Mus musculus}
Probab=49.43 E-value=7.5 Score=25.49 Aligned_cols=22 Identities=18% Similarity=0.211 Sum_probs=4.9
Q ss_pred HHHHhhccccChHHHHHHHHHH
Q 042401 15 LAARIHLSSANNATQQRYVHLH 36 (126)
Q Consensus 15 ~~~~~~~~~a~~~~~~~il~~h 36 (126)
.+.++.++.++....+.+..+|
T Consensus 15 ~l~~~~~s~~~~~~~~~F~~qH 36 (144)
T 2j4t_A 15 GLVVIPPTLAQNERYEKFLRQH 36 (144)
T ss_dssp -----------CHHHHHHHHHH
T ss_pred HHhccccccccchHHHHHHHHe
Confidence 3445555555412345555544
No 18
>4e17_B Catenin alpha-1; four helix bundle, cell adhesion; 2.30A {Mus musculus}
Probab=21.62 E-value=73 Score=16.17 Aligned_cols=17 Identities=18% Similarity=0.221 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHhhhhc
Q 042401 27 ATQQRYVHLHNEAPRNV 43 (126)
Q Consensus 27 ~~~~~il~~hN~~R~~~ 43 (126)
+.++.|+..-|.+|..+
T Consensus 12 ~rkerIv~eCnavrqAL 28 (40)
T 4e17_B 12 DRRERIVAECNAVRQAL 28 (40)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 78899999999999764
Done!