Your job contains 1 sequence.
>042402
MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP
IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG
HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDKGG
FMSLQSMGSGRIESSFSDMSISSGGGGFGSGSGFGLATTDVETFSSKSKGRPPSSANAPP
KGLGMQLGKSQRTNQFLESLKAEGEVILEDVKPIAGQSRAAAAAPPLTDPITLTVEEKIN
VSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILFKTHPNMNKELFTHENI
LGLKDPNRPFPQAKLWRMQSADESMVPLTINCWPSVSGNETYVSIEYEASTMFDLRNVVI
SVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDNSNRSGSMEFVVPPADSSSFFPI
SVRFSATSTYSDLKVVNIIPLRGGAPPKFSQRTVLITENYQVV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042402
(523 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2175269 - symbol:AT5G05010 species:3702 "Arabi... 1911 2.3e-197 1
UNIPROTKB|P49661 - symbol:LOC_Os01g61710 "Coatomer subuni... 1071 1.7e-191 2
ZFIN|ZDB-GENE-021031-2 - symbol:arcn1a "archain 1a" speci... 567 1.1e-112 2
MGI|MGI:2387591 - symbol:Arcn1 "archain 1" species:10090 ... 565 5.5e-111 2
RGD|1359110 - symbol:Arcn1 "archain 1" species:10116 "Rat... 565 5.5e-111 2
UNIPROTKB|Q5ZL57 - symbol:ARCN1 "Coatomer subunit delta" ... 558 3.9e-110 2
UNIPROTKB|I3LBY0 - symbol:ARCN1 "Uncharacterized protein"... 554 3.9e-110 2
UNIPROTKB|P53619 - symbol:ARCN1 "Coatomer subunit delta" ... 556 4.9e-110 2
UNIPROTKB|P48444 - symbol:ARCN1 "Coatomer subunit delta" ... 556 4.9e-110 2
UNIPROTKB|F1PRT4 - symbol:ARCN1 "Uncharacterized protein"... 555 6.3e-110 2
UNIPROTKB|B0YIW6 - symbol:ARCN1 "Archain 1, isoform CRA_a... 556 1.7e-109 2
ZFIN|ZDB-GENE-040121-7 - symbol:arcn1b "archain 1b" speci... 553 1.5e-108 2
FB|FBgn0028969 - symbol:deltaCOP "delta-coatomer protein"... 1043 2.2e-105 1
WB|WBGene00015734 - symbol:C13B9.3 species:6239 "Caenorha... 830 8.2e-83 1
ASPGD|ASPL0000062974 - symbol:AN0922 species:162425 "Emer... 763 1.0e-75 1
UNIPROTKB|G4MP14 - symbol:MGG_05676 "Coatomer subunit del... 747 5.1e-74 1
CGD|CAL0000185 - symbol:RET2 species:5476 "Candida albica... 461 1.8e-64 2
UNIPROTKB|Q5AGE3 - symbol:RET2 "Putative uncharacterized ... 461 1.8e-64 2
DICTYBASE|DDB_G0268702 - symbol:copD "coatomer protein co... 613 8.1e-60 1
SGD|S000001947 - symbol:RET2 "Delta subunit of the coatom... 404 5.4e-55 2
GENEDB_PFALCIPARUM|PF11_0359 - symbol:PF11_0359 "coatomer... 362 4.8e-52 2
UNIPROTKB|Q8II16 - symbol:PF11_0359 "Coatomer delta subun... 362 4.8e-52 2
POMBASE|SPCC285.08 - symbol:ret2 "coatomer delta subunit ... 456 3.5e-43 1
UNIPROTKB|E9PK34 - symbol:ARCN1 "Coatomer subunit delta" ... 208 4.3e-16 1
CGD|CAL0004774 - symbol:APM1 species:5476 "Candida albica... 123 5.6e-08 2
UNIPROTKB|Q5AJY4 - symbol:APM1 "Potential clathrin-associ... 123 5.6e-08 2
FB|FBgn0024833 - symbol:AP-1mu "Adaptor Protein complex 1... 107 3.8e-06 2
POMBASE|SPBP16F5.07 - symbol:apm1 "AP-1 adaptor complex m... 111 2.9e-05 2
UNIPROTKB|O00189 - symbol:AP4M1 "AP-4 complex subunit mu-... 89 3.1e-05 2
RGD|1310233 - symbol:Ap4m1 "adaptor-related protein compl... 88 6.3e-05 2
UNIPROTKB|E2RED8 - symbol:AP4M1 "Uncharacterized protein"... 87 6.4e-05 2
ASPGD|ASPL0000077433 - symbol:AN8795 species:162425 "Emer... 112 6.7e-05 2
UNIPROTKB|F1NZQ2 - symbol:AP1M1 "Uncharacterized protein"... 96 0.00011 2
UNIPROTKB|Q2KJ81 - symbol:AP1M1 "AP-1 complex subunit mu-... 96 0.00012 2
UNIPROTKB|J9P1I0 - symbol:AP1M1 "Uncharacterized protein"... 96 0.00012 2
UNIPROTKB|Q9BXS5 - symbol:AP1M1 "AP-1 complex subunit mu-... 96 0.00012 2
UNIPROTKB|F2Z5I7 - symbol:AP1M1 "Uncharacterized protein"... 96 0.00012 2
RGD|1307653 - symbol:Ap1m1 "adaptor-related protein compl... 96 0.00015 2
DICTYBASE|DDB_G0289247 - symbol:apm1 "clathrin-adaptor me... 94 0.00016 2
MGI|MGI:102776 - symbol:Ap1m1 "adaptor-related protein co... 96 0.00019 2
ZFIN|ZDB-GENE-040801-159 - symbol:ap1m3 "adaptor-related ... 93 0.00020 2
UNIPROTKB|C9JC87 - symbol:AP4M1 "AP-4 complex subunit mu-... 89 0.00027 2
WB|WBGene00000150 - symbol:apm-1 species:6239 "Caenorhabd... 113 0.00047 2
UNIPROTKB|F1PYG5 - symbol:AP1M1 "Uncharacterized protein"... 96 0.00049 2
MGI|MGI:1337063 - symbol:Ap4m1 "adaptor-related protein c... 83 0.00055 2
UNIPROTKB|Q29RY8 - symbol:AP4M1 "AP-4 complex subunit mu-... 84 0.00070 2
>TAIR|locus:2175269 [details] [associations]
symbol:AT5G05010 species:3702 "Arabidopsis thaliana"
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0005829 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 EMBL:AB005245 GO:GO:0030131 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0030663 eggNOG:NOG309668 HOGENOM:HOG000203984
ProtClustDB:CLSN2689474 PANTHER:PTHR10121 EMBL:AY054464
EMBL:AY054658 EMBL:AY114626 EMBL:AK221894 IPI:IPI00518859
RefSeq:NP_001031836.1 RefSeq:NP_568147.1 UniGene:At.20926
ProteinModelPortal:Q93Y22 STRING:Q93Y22 PaxDb:Q93Y22 PRIDE:Q93Y22
EnsemblPlants:AT5G05010.1 EnsemblPlants:AT5G05010.2 GeneID:830383
KEGG:ath:AT5G05010 TAIR:At5g05010 InParanoid:Q93Y22 OMA:SMESHEE
PhylomeDB:Q93Y22 Genevestigator:Q93Y22 Uniprot:Q93Y22
Length = 527
Score = 1911 (677.8 bits), Expect = 2.3e-197, P = 2.3e-197
Identities = 386/533 (72%), Positives = 437/533 (81%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MVVLAA+IV KSGK++VSR +VDMSRIRIEGLLAAFPKLVG GKQHTY+ETENVRYVYQP
Sbjct: 1 MVVLAAAIVVKSGKVIVSRHYVDMSRIRIEGLLAAFPKLVGMGKQHTYIETENVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
IEAL+LLLVT KQSNILEDL TL LLSKLVPEYS SLDEEGI + +FEL+FAFDEVISLG
Sbjct: 61 IEALFLLLVTTKQSNILEDLATLTLLSKLVPEYSMSLDEEGISRASFELIFAFDEVISLG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDKGG 180
HKE+VTVAQVKQYCEMESHEEKLHKLV+QSKIN+TKDVMKRKA+EIDKSKIEKN+ GG
Sbjct: 121 HKESVTVAQVKQYCEMESHEEKLHKLVMQSKINDTKDVMKRKANEIDKSKIEKNK--PGG 178
Query: 181 FMSLQSMGSGRIEXXXXXXXXXXXXXXXXXXXXXXLATTDVETFSSKSKGRPPSSANAPP 240
F S+ SMGSGR+E +DV+ ++K K R SS APP
Sbjct: 179 FSSMGSMGSGRLESGFNELSISSGGGGGYGSGSGFGMISDVDPINTKPKDRSRSSVTAPP 238
Query: 241 KGLGMQLGKSQRTNQFLESLKAEGEVILEDVKPIAGQSRXXXXXXXLTDPITLTVEEKIN 300
K GM+LGKS + NQ +ESLKAEGE ++EDVKP GQS+ TDP TLTVEEK+N
Sbjct: 239 KSSGMKLGKSGK-NQLMESLKAEGEDVIEDVKP-TGQSKAAAPPP--TDPFTLTVEEKLN 294
Query: 301 VSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILFKTHPNMNKELFTHENI 360
V+L+RDGG+S+FD+QGTLSLQILNQEDG +QVQI TG NP ILFKTHPN+N+++F +ENI
Sbjct: 295 VALRRDGGLSSFDMQGTLSLQILNQEDGFVQVQIATGENPEILFKTHPNINRDMFNNENI 354
Query: 361 LGLKDPNRPFPQAK--------LWRMQSADESMVPLTINCWPSVSGNETYVSIEYEASTM 412
LGLK P++PFP + WRMQ ADESMVPLTINCWPSVSGNETYVS+EYEAS+M
Sbjct: 355 LGLKRPDQPFPTGQGGDGVGLLRWRMQRADESMVPLTINCWPSVSGNETYVSLEYEASSM 414
Query: 413 FDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDNSNRSGSMEFVVPPA 472
FDL NV+ISVPLPALREAPSVRQ DGEWRYD RNSVLEW+ILLIDNSNRSGSMEFVVPP
Sbjct: 415 FDLTNVIISVPLPALREAPSVRQCDGEWRYDPRNSVLEWSILLIDNSNRSGSMEFVVPPV 474
Query: 473 DSSSFFPISVRFSATSTYSDLKVVNIIPLRGG--APPKFSQRTVLITENYQVV 523
DSS FFPISV+F+ATSTYS LKV +IPLRGG A P+F QRT LI +NYQV+
Sbjct: 475 DSSVFFPISVQFAATSTYSGLKVTGMIPLRGGGGATPRFVQRTQLIAQNYQVI 527
>UNIPROTKB|P49661 [details] [associations]
symbol:LOC_Os01g61710 "Coatomer subunit delta-3"
species:39947 "Oryza sativa Japonica Group" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005798 "Golgi-associated vesicle" evidence=ISS]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0005798 GO:GO:0030131 SUPFAM:SSF49447 SUPFAM:SSF64356
EMBL:AP008207 GO:GO:0030663 EMBL:Z67962 EMBL:AP004366 EMBL:AK069745
EMBL:D22365 PIR:T03598 RefSeq:NP_001044715.1 UniGene:Os.5854
ProteinModelPortal:P49661 IntAct:P49661
EnsemblPlants:LOC_Os01g61710.2 EnsemblPlants:LOC_Os01g61710.3
EnsemblPlants:LOC_Os01g61710.4 GeneID:4327409 KEGG:osa:4327409
Gramene:P49661 eggNOG:NOG309668 HOGENOM:HOG000203984
ProtClustDB:CLSN2689474 PANTHER:PTHR10121 Uniprot:P49661
Length = 518
Score = 1071 (382.1 bits), Expect = 1.7e-191, Sum P(2) = 1.7e-191
Identities = 210/314 (66%), Positives = 252/314 (80%)
Query: 220 DVETFSSKSKGRP----PSSANAPPKGLGMQLGKSQRTNQFLESLKAEGEVILEDVKPIA 275
D+++F+ K+KGRP P+SA+ G GM+L K+Q+TNQFLESLKAEGEVILED +P A
Sbjct: 208 DMDSFTHKAKGRPSAPAPASASTKVPG-GMKLSKAQKTNQFLESLKAEGEVILEDTQPSA 266
Query: 276 GQSRXXXXXXXLTDPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIE 335
QSR +DPIT+T+EEK+NV++KRDGG+SNFD+QGTL+LQILN DG IQ+QIE
Sbjct: 267 TQSRSSYIPP--SDPITVTIEEKLNVTVKRDGGVSNFDIQGTLALQILNDTDGFIQLQIE 324
Query: 336 TGGNPGILFKTHPNMNKELFTHENILGLKDPNRPFPQAK------LWRMQSADESMVPLT 389
PG+ FKTHPN+NKELF + I+G KDPNRPFP + WR+Q +ES +PL
Sbjct: 325 NQDVPGLNFKTHPNINKELFNSQQIVGAKDPNRPFPSGQNETPLVKWRIQELNESSLPLA 384
Query: 390 INCWPSVSGNETYVSIEYEASTMFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVL 449
+NCWPSVSGNETYV+IEYEAS MFDL NVVIS+PLPALREAP VRQIDGEWRYDSRNSVL
Sbjct: 385 VNCWPSVSGNETYVNIEYEASEMFDLHNVVISIPLPALREAPGVRQIDGEWRYDSRNSVL 444
Query: 450 EWTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAPPKF 509
EW+I+L+D SNRSGS+EF VP AD S+FFPISV FSA++T+SDLKV I PLR G+PPKF
Sbjct: 445 EWSIILVDQSNRSGSLEFTVPAADPSTFFPISVGFSASNTFSDLKVTAIRPLREGSPPKF 504
Query: 510 SQRTVLITENYQVV 523
SQR L+T NYQVV
Sbjct: 505 SQRNRLVTYNYQVV 518
Score = 807 (289.1 bits), Expect = 1.7e-191, Sum P(2) = 1.7e-191
Identities = 159/189 (84%), Positives = 177/189 (93%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MVVLAASI+SKSGK LVSRQFVDMSRIRI+GLLAAFPKLVG+GKQHTYVETENVRYVYQP
Sbjct: 1 MVVLAASIISKSGKALVSRQFVDMSRIRIDGLLAAFPKLVGSGKQHTYVETENVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
IEALYLLL+TNKQSNILEDL+TLRLLSKL+PEY+ SLDEEG+CK AFELLFAF E ISLG
Sbjct: 61 IEALYLLLITNKQSNILEDLDTLRLLSKLIPEYAPSLDEEGVCKAAFELLFAFIEAISLG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDKGG 180
+KENVTVAQVKQYCEMESHEEKLHKLV+QSKINETKDVM+RK +EI+KSK ++ + DKGG
Sbjct: 121 NKENVTVAQVKQYCEMESHEEKLHKLVMQSKINETKDVMRRKVTEIEKSKTDRGKPDKGG 180
Query: 181 FMSLQSMGS 189
F SL++ S
Sbjct: 181 FGSLRTPNS 189
>ZFIN|ZDB-GENE-021031-2 [details] [associations]
symbol:arcn1a "archain 1a" species:7955 "Danio rerio"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
ZFIN:ZDB-GENE-021031-2 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121 OMA:SMESHEE
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 OrthoDB:EOG4FBHSQ
EMBL:BX294169 EMBL:BC045318 IPI:IPI00509974 RefSeq:NP_958867.1
UniGene:Dr.77264 STRING:Q7ZW27 Ensembl:ENSDART00000014666
GeneID:266982 KEGG:dre:266982 CTD:266982 InParanoid:Q7ZW27
NextBio:20804844 Uniprot:Q7ZW27
Length = 509
Score = 567 (204.7 bits), Expect = 1.1e-112, Sum P(2) = 1.1e-112
Identities = 113/313 (36%), Positives = 190/313 (60%)
Query: 219 TDVETFSSKSKGRP-PSSANAPPKGLGMQLGKSQRTNQFLESLKAEGE-VILEDVKPIAG 276
TD K K P P + P K L + +GK + + F++ LK+EGE VIL
Sbjct: 199 TDTLIEPEKPKPTPAPVRSTGPSKALKL-VGKGKEVDDFVDKLKSEGENVILPGTGKRPS 257
Query: 277 QSRXXXXXXXLTDPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIET 336
+ T+ + L VEE+I ++ RDGG+ N ++ G ++L++ ++++G I++ I
Sbjct: 258 DASKSLPPPTHTESVHLRVEERITLTCGRDGGLQNMEILGMITLRVSDEKNGRIRLNINN 317
Query: 337 GGNPGILFKTHPNMNKELFTHENILGLKDPNRPFPQAK-----LWRMQSADESMVPLTIN 391
G+ +THPN++K+LFT ++++GLK+P++ FP WR+Q+ DES++PLTIN
Sbjct: 318 NDKRGVQLQTHPNVDKKLFTLDSVIGLKNPDKSFPLKSDVGVLKWRLQTTDESLIPLTIN 377
Query: 392 CWPSVSGNETYVSIEYEAST-MFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLE 450
CWPS SG V+IEYE +L +VVIS+P+P+ AP + +DGE+R+DSR +VLE
Sbjct: 378 CWPSESGTGCDVNIEYELQDDSLELNDVVISIPVPSGVGAPVIGDLDGEYRHDSRRNVLE 437
Query: 451 WTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAPPKFS 510
W + +ID N++GS+EF + + FFP++V F + +Y D++V + + G +P ++S
Sbjct: 438 WCLPVIDLKNKTGSLEFSIS-GQPNDFFPVNVSFVSKGSYCDIQVAKVSQVDGDSPVRYS 496
Query: 511 QRTVLITENYQVV 523
T + + Y+++
Sbjct: 497 TETSFVVDKYEIL 509
Score = 565 (203.9 bits), Expect = 1.1e-112, Sum P(2) = 1.1e-112
Identities = 108/189 (57%), Positives = 149/189 (78%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MV+LAA++ +K+GK LVSRQFV+M+R R+EGLLAAFPKL+ TGKQHT+VETE+VRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKALVSRQFVEMTRTRVEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E LY++LVT K SNILEDLETLRL S+++PEY L+E I + F+L+FAFDE+++LG
Sbjct: 61 LEKLYMVLVTTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDKG- 179
++ENV +AQ++ + EM+SHEEK+ + V +++ E K M+RKA E+ + + + RG KG
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQIRRDTERGKKGP 180
Query: 180 GFMSLQSMG 188
GF S G
Sbjct: 181 GFGGFGSSG 189
>MGI|MGI:2387591 [details] [associations]
symbol:Arcn1 "archain 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0021691 "cerebellar
Purkinje cell layer maturation" evidence=IMP] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0030137 "COPI-coated vesicle"
evidence=IDA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0043473 "pigmentation" evidence=IMP] [GO:0048193 "Golgi vesicle
transport" evidence=IMP] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 MGI:MGI:2387591
GO:GO:0006886 GO:GO:0016192 EMBL:CH466522 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
GO:GO:0030663 eggNOG:NOG309668 HOGENOM:HOG000203984
PANTHER:PTHR10121 CTD:372 GeneTree:ENSGT00390000017207
HOVERGEN:HBG005381 OMA:NNDVGVL OrthoDB:EOG4FBHSQ EMBL:AK028556
EMBL:BC017124 EMBL:BC023728 EMBL:BC033387 EMBL:BC034754
EMBL:BC083152 IPI:IPI00313558 RefSeq:NP_666097.3 UniGene:Mm.371682
UniGene:Mm.465799 ProteinModelPortal:Q5XJY5 STRING:Q5XJY5
PhosphoSite:Q5XJY5 REPRODUCTION-2DPAGE:Q5XJY5 PaxDb:Q5XJY5
PRIDE:Q5XJY5 Ensembl:ENSMUST00000034607 GeneID:213827
KEGG:mmu:213827 InParanoid:Q91W48 NextBio:374120 Bgee:Q5XJY5
CleanEx:MM_ARCN1 Genevestigator:Q5XJY5
GermOnline:ENSMUSG00000032096 Uniprot:Q5XJY5
Length = 511
Score = 565 (203.9 bits), Expect = 5.5e-111, Sum P(2) = 5.5e-111
Identities = 115/317 (36%), Positives = 191/317 (60%)
Query: 216 LATTDVETFSSKSKGRP-PSSANAPPKGLGMQLG-KSQRTNQFLESLKAEGEVILE-DVK 272
+ T +ET K K P P+ + P K L +LG K + + F++ LK+EGE I+ ++
Sbjct: 200 ITETIIET--DKPKVAPAPARPSGPSKAL--KLGAKGKEVDNFVDKLKSEGETIMSSNMG 255
Query: 273 PIAGQSRXXXXXXXLTDPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQV 332
++ + + + +EEKI ++ RDGG+ N ++ G + L+I + + G I++
Sbjct: 256 KRTSEATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRL 315
Query: 333 QIETGGNPGILFKTHPNMNKELFTHENILGLKDPNRPFPQAK-----LWRMQSADESMVP 387
+E G+ +THPN++K+LFT E+++GLK+P + FP WR+Q+ +ES +P
Sbjct: 316 HVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIP 375
Query: 388 LTINCWPSVSGNETYVSIEYEAST-MFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRN 446
LTINCWPS SGN V+IEYE +L +VVI++PLP+ AP + +IDGE+R+DSR
Sbjct: 376 LTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRR 435
Query: 447 SVLEWTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAP 506
+ LEW + +ID N+SGS+EF +P + FFP+ V F + Y +++V + + G +P
Sbjct: 436 NTLEWCLPVIDAKNKSGSLEFSIP-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSP 494
Query: 507 PKFSQRTVLITENYQVV 523
+FS T + + Y+++
Sbjct: 495 VRFSTETTFLVDKYEIL 511
Score = 551 (199.0 bits), Expect = 5.5e-111, Sum P(2) = 5.5e-111
Identities = 109/195 (55%), Positives = 153/195 (78%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MV+LAA++ +K+GK +VSRQFV+M+R RIEGLLAAFPKL+ TGKQHT+VETE+VRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E LY++L+T K SNILEDLETLRL S+++PEY +L+E I + F+L+FAFDE+++LG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNR-GDK- 178
++ENV +AQ++ + EM+SHEEK+ + V +++ E K M+RKA E+ +++ + R G K
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 180
Query: 179 ---GGF-MSLQSMGS 189
GGF S S GS
Sbjct: 181 PGFGGFGSSAVSGGS 195
>RGD|1359110 [details] [associations]
symbol:Arcn1 "archain 1" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=ISO] [GO:0021691 "cerebellar Purkinje cell layer
maturation" evidence=ISO] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030137 "COPI-coated vesicle" evidence=ISO] [GO:0043473
"pigmentation" evidence=ISO] [GO:0048193 "Golgi vesicle transport"
evidence=ISO] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 RGD:1359110
GO:GO:0006886 GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030663
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121 CTD:372
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 OrthoDB:EOG4FBHSQ
EMBL:BC081979 IPI:IPI00373289 RefSeq:NP_001007663.1 UniGene:Rn.2185
ProteinModelPortal:Q66H80 STRING:Q66H80 PhosphoSite:Q66H80
PRIDE:Q66H80 Ensembl:ENSRNOT00000018598 GeneID:300674
KEGG:rno:300674 UCSC:RGD:1359110 InParanoid:Q66H80 NextBio:647284
Genevestigator:Q66H80 GermOnline:ENSRNOG00000013843 Uniprot:Q66H80
Length = 511
Score = 565 (203.9 bits), Expect = 5.5e-111, Sum P(2) = 5.5e-111
Identities = 115/317 (36%), Positives = 191/317 (60%)
Query: 216 LATTDVETFSSKSKGRP-PSSANAPPKGLGMQLG-KSQRTNQFLESLKAEGEVILE-DVK 272
+ T +ET K K P P+ + P K L +LG K + + F++ LK+EGE I+ ++
Sbjct: 200 ITETIIET--DKPKVAPAPARPSGPSKAL--KLGAKGKEVDNFVDKLKSEGETIMSSNMG 255
Query: 273 PIAGQSRXXXXXXXLTDPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQV 332
++ + + + +EEKI ++ RDGG+ N ++ G + L+I + + G I++
Sbjct: 256 KRTSEAAKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRL 315
Query: 333 QIETGGNPGILFKTHPNMNKELFTHENILGLKDPNRPFPQAK-----LWRMQSADESMVP 387
+E G+ +THPN++K+LFT E+++GLK+P + FP WR+Q+ +ES +P
Sbjct: 316 HVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIP 375
Query: 388 LTINCWPSVSGNETYVSIEYEAST-MFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRN 446
LTINCWPS SGN V+IEYE +L +VVI++PLP+ AP + +IDGE+R+DSR
Sbjct: 376 LTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRR 435
Query: 447 SVLEWTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAP 506
+ LEW + +ID N+SGS+EF +P + FFP+ V F + Y +++V + + G +P
Sbjct: 436 NTLEWCLPVIDAKNKSGSLEFSIP-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSP 494
Query: 507 PKFSQRTVLITENYQVV 523
+FS T + + Y+++
Sbjct: 495 VRFSTETTFLVDKYEIL 511
Score = 551 (199.0 bits), Expect = 5.5e-111, Sum P(2) = 5.5e-111
Identities = 109/195 (55%), Positives = 153/195 (78%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MV+LAA++ +K+GK +VSRQFV+M+R RIEGLLAAFPKL+ TGKQHT+VETE+VRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E LY++L+T K SNILEDLETLRL S+++PEY +L+E I + F+L+FAFDE+++LG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNR-GDK- 178
++ENV +AQ++ + EM+SHEEK+ + V +++ E K M+RKA E+ +++ + R G K
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 180
Query: 179 ---GGF-MSLQSMGS 189
GGF S S GS
Sbjct: 181 PGFGGFGSSAVSGGS 195
>UNIPROTKB|Q5ZL57 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0030663 eggNOG:NOG309668 HOGENOM:HOG000203984
PANTHER:PTHR10121 CTD:372 GeneTree:ENSGT00390000017207
HOVERGEN:HBG005381 OMA:NNDVGVL OrthoDB:EOG4FBHSQ EMBL:AJ719877
IPI:IPI00600471 RefSeq:NP_001072967.1 UniGene:Gga.1878
ProteinModelPortal:Q5ZL57 IntAct:Q5ZL57 STRING:Q5ZL57 PRIDE:Q5ZL57
Ensembl:ENSGALT00000012021 GeneID:770561 KEGG:gga:770561
InParanoid:Q5ZL57 NextBio:20920779 Uniprot:Q5ZL57
Length = 510
Score = 558 (201.5 bits), Expect = 3.9e-110, Sum P(2) = 3.9e-110
Identities = 115/316 (36%), Positives = 191/316 (60%)
Query: 216 LATTDVETFSSKSKGRP-PSSANAPPKGLGMQLG-KSQRTNQFLESLKAEGEVILEDVKP 273
+ T +ET K K P PS + P K L +LG K + + F++ LK+EGE I+ V
Sbjct: 200 ITETIIET--EKPKVAPAPSRPSGPSKAL--KLGAKGKEVDNFVDKLKSEGENIMTSVGK 255
Query: 274 IAGQSRXXXXXXXLTDPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQ 333
+ ++ + + + +EEKI+++ RDGG+ N ++ G + L I +++ I++
Sbjct: 256 RSTEAAKVLAPPINMESVHMKIEEKISLTCGRDGGLQNMELHGMIMLHISDEKFARIRLH 315
Query: 334 IETGGNPGILFKTHPNMNKELFTHENILGLKDPNRPFP-QAKL----WRMQSADESMVPL 388
+E G+ +THPN++K+LFT E+ +GLK+P + FP + + WR+Q+ +ES +PL
Sbjct: 316 VENEDKRGVQLQTHPNVDKKLFTAESQIGLKNPEKSFPINSDVGVLKWRLQTTEESFIPL 375
Query: 389 TINCWPSVSGNETYVSIEYEAST-MFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNS 447
TINCWPS SGN V+IEYE +L +VVI +PLP+ AP + +IDGE+R+DSR +
Sbjct: 376 TINCWPSESGNSCDVNIEYELQEESLELNDVVIMIPLPSGVGAPVIGEIDGEYRHDSRRN 435
Query: 448 VLEWTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAPP 507
+LEW + +ID N+SGS+EF + + FFP+ V F + Y +++V + + G +P
Sbjct: 436 LLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSPV 494
Query: 508 KFSQRTVLITENYQVV 523
+FS T + + Y+++
Sbjct: 495 RFSTETTFLVDKYEIL 510
Score = 550 (198.7 bits), Expect = 3.9e-110, Sum P(2) = 3.9e-110
Identities = 106/188 (56%), Positives = 150/188 (79%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MV+LAA++ +K+GK +VSRQFV+M+R RIEGLLAAFPKL+ TGKQHT+VETE+VRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E LY++L+T K SNILEDLETLRL S+++PEY +L+E I + F+L+FAFDE+++LG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNR-GDK- 178
++ENV +AQ++ + EM+SHEEK+ + V +++ E K M+RKA E+ +++ + R G K
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERLGKKA 180
Query: 179 ---GGFMS 183
GGF S
Sbjct: 181 PGFGGFGS 188
>UNIPROTKB|I3LBY0 [details] [associations]
symbol:ARCN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 PANTHER:PTHR10121 CTD:372
GeneTree:ENSGT00390000017207 OMA:NNDVGVL EMBL:FP565446
RefSeq:XP_003357366.1 Ensembl:ENSSSCT00000028599 GeneID:100622860
KEGG:ssc:100622860 Uniprot:I3LBY0
Length = 511
Score = 554 (200.1 bits), Expect = 3.9e-110, Sum P(2) = 3.9e-110
Identities = 108/194 (55%), Positives = 152/194 (78%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MV+LAA++ +K+GK +VSRQFV+M+R RIEGLLAAFPKL+ TGKQHT+VETE+VRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E LY++L+T K SNILEDLETLRL S+++PEY +L+E I + F+L+FAFDE+++LG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNR-GDK- 178
++ENV +AQ++ + EM+SHEEK+ + V +++ E K M+RKA E+ +++ + R G K
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 180
Query: 179 ---GGFMSLQSMGS 189
GGF S GS
Sbjct: 181 PGFGGFGSSTVSGS 194
Score = 554 (200.1 bits), Expect = 3.9e-110, Sum P(2) = 3.9e-110
Identities = 114/318 (35%), Positives = 191/318 (60%)
Query: 216 LATTDVETFSSKSKGRP-PSSANAPPKGLGMQLG-KSQRTNQFLESLKAEGEVILEDV-- 271
+ T +ET K K P P+ + P K L +LG K + + F++ LK+EGE I+
Sbjct: 200 ITETIIET--DKPKVAPAPARPSGPSKAL--KLGAKGKEVDNFVDKLKSEGETIMSSNMG 255
Query: 272 KPIAGQSRXXXXXXXLTDPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQ 331
K + ++ + + + + +EEKI ++ RDGG+ N ++ G + L+I + + G I+
Sbjct: 256 KRTSDATKVHAPPINM-ESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIR 314
Query: 332 VQIETGGNPGILFKTHPNMNKELFTHENILGLKDPNRPFPQAK-----LWRMQSADESMV 386
+ +E G+ +THPN++K+LFT E+++GLK+P + FP WR+Q+ +ES +
Sbjct: 315 LHVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFI 374
Query: 387 PLTINCWPSVSGNETYVSIEYEAST-MFDLRNVVISVPLPALREAPSVRQIDGEWRYDSR 445
PLTINCWPS SGN V+IEYE +L +V+I++PLP+ AP + +IDGE+R+DSR
Sbjct: 375 PLTINCWPSESGNGCDVNIEYELQEDNLELNDVIITIPLPSGVGAPVIGEIDGEYRHDSR 434
Query: 446 NSVLEWTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGA 505
+ LEW + +ID N+SGS+EF + + FFP+ V F + Y +++V + + G +
Sbjct: 435 RNTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNS 493
Query: 506 PPKFSQRTVLITENYQVV 523
P +FS T + + Y+++
Sbjct: 494 PVRFSTETTFLVDKYEIL 511
>UNIPROTKB|P53619 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886
GO:GO:0006891 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030126 GO:GO:0006890
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121 EMBL:X94265
IPI:IPI00706192 RefSeq:NP_001181942.1 UniGene:Bt.23103
ProteinModelPortal:P53619 IntAct:P53619 STRING:P53619 PRIDE:P53619
Ensembl:ENSBTAT00000008799 GeneID:533078 KEGG:bta:533078 CTD:372
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 InParanoid:P53619
OMA:NNDVGVL OrthoDB:EOG4FBHSQ NextBio:20875903 Uniprot:P53619
Length = 511
Score = 556 (200.8 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 114/317 (35%), Positives = 190/317 (59%)
Query: 216 LATTDVETFSSKSKGRP-PSSANAPPKGLGMQLG-KSQRTNQFLESLKAEGE-VILEDVK 272
+ T +ET K K P P+ + P K L +LG K + + F++ LK+EGE +I ++
Sbjct: 200 ITETIIET--DKPKVAPAPARPSGPSKAL--KLGAKGKEVDNFVDKLKSEGENIISSNMG 255
Query: 273 PIAGQSRXXXXXXXLTDPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQV 332
++ + + + +EEKI ++ RDGG+ N ++ G + L+I + + G I++
Sbjct: 256 KRTSEATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRL 315
Query: 333 QIETGGNPGILFKTHPNMNKELFTHENILGLKDPNRPFPQAK-----LWRMQSADESMVP 387
+E G+ +THPN++K+LFT E+++GLK+P + FP WR+Q+ +ES +P
Sbjct: 316 HVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIP 375
Query: 388 LTINCWPSVSGNETYVSIEYEAST-MFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRN 446
LTINCWPS SGN V+IEYE +L +VVI++PLP+ AP + +IDGE+R+DSR
Sbjct: 376 LTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRR 435
Query: 447 SVLEWTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAP 506
+ LEW + +ID N+SGS+EF + + FFP+ V F + Y +++V + + G +P
Sbjct: 436 NTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFISKKNYCNIQVTKVTQVDGNSP 494
Query: 507 PKFSQRTVLITENYQVV 523
+FS T + + Y+++
Sbjct: 495 VRFSTETTFLVDKYEIL 511
Score = 551 (199.0 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 109/195 (55%), Positives = 153/195 (78%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MV+LAA++ +K+GK +VSRQFV+M+R RIEGLLAAFPKL+ TGKQHT+VETE+VRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E LY++L+T K SNILEDLETLRL S+++PEY +L+E I + F+L+FAFDE+++LG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNR-GDK- 178
++ENV +AQ++ + EM+SHEEK+ + V +++ E K M+RKA E+ +++ + R G K
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 180
Query: 179 ---GGF-MSLQSMGS 189
GGF S S GS
Sbjct: 181 PGFGGFGSSTVSGGS 195
>UNIPROTKB|P48444 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=ISS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
GO:GO:0005829 GO:GO:0006886 GO:GO:0030131 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030126
GO:GO:0048205 GO:GO:0006890 eggNOG:NOG309668 HOGENOM:HOG000203984
PANTHER:PTHR10121 CTD:372 HOVERGEN:HBG005381 EMBL:X81197
EMBL:X81198 EMBL:AK304019 EMBL:AP000941 EMBL:BC093636 EMBL:BC093638
IPI:IPI00514053 IPI:IPI00915422 PIR:A56750 RefSeq:NP_001135753.1
RefSeq:NP_001646.2 UniGene:Hs.33642 ProteinModelPortal:P48444
IntAct:P48444 STRING:P48444 PhosphoSite:P48444 DMDM:1351970
OGP:P48444 PaxDb:P48444 PRIDE:P48444 Ensembl:ENST00000264028
Ensembl:ENST00000392859 GeneID:372 KEGG:hsa:372 UCSC:uc001ptq.3
GeneCards:GC11P118444 HGNC:HGNC:649 HPA:HPA037573 MIM:600820
neXtProt:NX_P48444 PharmGKB:PA24931 ChiTaRS:ARCN1 GenomeRNAi:372
NextBio:1553 ArrayExpress:P48444 Bgee:P48444 CleanEx:HS_ARCN1
Genevestigator:P48444 GermOnline:ENSG00000095139 Uniprot:P48444
Length = 511
Score = 556 (200.8 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 114/317 (35%), Positives = 189/317 (59%)
Query: 216 LATTDVETFSSKSKGRP-PSSANAPPKGLGMQLG-KSQRTNQFLESLKAEGEVILED-VK 272
+ T +ET K K P P+ + P K L +LG K + + F++ LK+EGE I+ +
Sbjct: 200 ITETIIET--DKPKVAPAPARPSGPSKAL--KLGAKGKEVDNFVDKLKSEGETIMSSSMG 255
Query: 273 PIAGQSRXXXXXXXLTDPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQV 332
++ + + + +EEKI ++ RDGG+ N ++ G + L+I + + G I++
Sbjct: 256 KRTSEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRL 315
Query: 333 QIETGGNPGILFKTHPNMNKELFTHENILGLKDPNRPFPQAK-----LWRMQSADESMVP 387
+E G+ +THPN++K+LFT E+++GLK+P + FP WR+Q+ +ES +P
Sbjct: 316 HVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIP 375
Query: 388 LTINCWPSVSGNETYVSIEYEAST-MFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRN 446
LTINCWPS SGN V+IEYE +L +VVI++PLP+ AP + +IDGE+R+DSR
Sbjct: 376 LTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRR 435
Query: 447 SVLEWTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAP 506
+ LEW + +ID N+SGS+EF + + FFP+ V F + Y +++V + + G +P
Sbjct: 436 NTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSP 494
Query: 507 PKFSQRTVLITENYQVV 523
+FS T + + Y+++
Sbjct: 495 VRFSTETTFLVDKYEIL 511
Score = 551 (199.0 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 109/195 (55%), Positives = 153/195 (78%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MV+LAA++ +K+GK +VSRQFV+M+R RIEGLLAAFPKL+ TGKQHT+VETE+VRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E LY++L+T K SNILEDLETLRL S+++PEY +L+E I + F+L+FAFDE+++LG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNR-GDK- 178
++ENV +AQ++ + EM+SHEEK+ + V +++ E K M+RKA E+ +++ + R G K
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 180
Query: 179 ---GGF-MSLQSMGS 189
GGF S S GS
Sbjct: 181 PGFGGFGSSAVSGGS 195
>UNIPROTKB|F1PRT4 [details] [associations]
symbol:ARCN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886
GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 PANTHER:PTHR10121 CTD:372
GeneTree:ENSGT00390000017207 OMA:NNDVGVL EMBL:AAEX03003446
RefSeq:XP_536552.2 Ensembl:ENSCAFT00000020001 GeneID:479415
KEGG:cfa:479415 Uniprot:F1PRT4
Length = 511
Score = 555 (200.4 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 113/317 (35%), Positives = 190/317 (59%)
Query: 216 LATTDVETFSSKSKGRP-PSSANAPPKGLGMQLG-KSQRTNQFLESLKAEGEVILE-DVK 272
+ T +ET K K P P+ + P K L +LG K + + F++ LK+EGE I+ ++
Sbjct: 200 ITETIIET--DKPKVAPAPARPSGPSKAL--KLGAKGKEVDNFVDKLKSEGETIMSSNMG 255
Query: 273 PIAGQSRXXXXXXXLTDPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQV 332
++ + + + +EEKI ++ RDGG+ N ++ G + L+I + + G I++
Sbjct: 256 KRTSEATKVHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKFGRIRL 315
Query: 333 QIETGGNPGILFKTHPNMNKELFTHENILGLKDPNRPFPQAK-----LWRMQSADESMVP 387
+E G+ +THPN++K+LFT E+++GLK+P + FP WR+Q+ +ES +P
Sbjct: 316 HVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIP 375
Query: 388 LTINCWPSVSGNETYVSIEYEAST-MFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRN 446
LTINCWPS SGN V+IEYE +L +V+I++PLP+ AP + +IDGE+R+DSR
Sbjct: 376 LTINCWPSESGNGCDVNIEYELQEDNLELNDVIITIPLPSGVGAPVIGEIDGEYRHDSRR 435
Query: 447 SVLEWTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAP 506
+ LEW + +ID N+SGS+EF + + FFP+ V F + Y +++V + + G +P
Sbjct: 436 NTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFISKRNYCNIQVTKVTQVDGNSP 494
Query: 507 PKFSQRTVLITENYQVV 523
+FS T + + Y+++
Sbjct: 495 VRFSTETTFLVDKYEIL 511
Score = 551 (199.0 bits), Expect = 6.3e-110, Sum P(2) = 6.3e-110
Identities = 109/195 (55%), Positives = 153/195 (78%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MV+LAA++ +K+GK +VSRQFV+M+R RIEGLLAAFPKL+ TGKQHT+VETE+VRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E LY++L+T K SNILEDLETLRL S+++PEY +L+E I + F+L+FAFDE+++LG
Sbjct: 61 MEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNR-GDK- 178
++ENV +AQ++ + EM+SHEEK+ + V +++ E K M+RKA E+ +++ + R G K
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 180
Query: 179 ---GGF-MSLQSMGS 189
GGF S S GS
Sbjct: 181 PGFGGFGSSAVSGGS 195
>UNIPROTKB|B0YIW6 [details] [associations]
symbol:ARCN1 "Archain 1, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 EMBL:CH471065
GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 HOGENOM:HOG000203984
PANTHER:PTHR10121 HOVERGEN:HBG005381 OMA:NNDVGVL OrthoDB:EOG4FBHSQ
EMBL:AP000941 UniGene:Hs.33642 HGNC:HGNC:649 ChiTaRS:ARCN1
EMBL:EF444951 IPI:IPI00298520 STRING:B0YIW6 Ensembl:ENST00000359415
UCSC:uc009zag.3 Uniprot:B0YIW6
Length = 552
Score = 556 (200.8 bits), Expect = 1.7e-109, Sum P(2) = 1.7e-109
Identities = 114/317 (35%), Positives = 189/317 (59%)
Query: 216 LATTDVETFSSKSKGRP-PSSANAPPKGLGMQLG-KSQRTNQFLESLKAEGEVILED-VK 272
+ T +ET K K P P+ + P K L +LG K + + F++ LK+EGE I+ +
Sbjct: 241 ITETIIET--DKPKVAPAPARPSGPSKAL--KLGAKGKEVDNFVDKLKSEGETIMSSSMG 296
Query: 273 PIAGQSRXXXXXXXLTDPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQV 332
++ + + + +EEKI ++ RDGG+ N ++ G + L+I + + G I++
Sbjct: 297 KRTSEATKMHAPPINMESVHMKIEEKITLTCGRDGGLQNMELHGMIMLRISDDKYGRIRL 356
Query: 333 QIETGGNPGILFKTHPNMNKELFTHENILGLKDPNRPFPQAK-----LWRMQSADESMVP 387
+E G+ +THPN++K+LFT E+++GLK+P + FP WR+Q+ +ES +P
Sbjct: 357 HVENEDKKGVQLQTHPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIP 416
Query: 388 LTINCWPSVSGNETYVSIEYEAST-MFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRN 446
LTINCWPS SGN V+IEYE +L +VVI++PLP+ AP + +IDGE+R+DSR
Sbjct: 417 LTINCWPSESGNGCDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRR 476
Query: 447 SVLEWTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAP 506
+ LEW + +ID N+SGS+EF + + FFP+ V F + Y +++V + + G +P
Sbjct: 477 NTLEWCLPVIDAKNKSGSLEFSIA-GQPNDFFPVQVSFVSKKNYCNIQVTKVTQVDGNSP 535
Query: 507 PKFSQRTVLITENYQVV 523
+FS T + + Y+++
Sbjct: 536 VRFSTETTFLVDKYEIL 552
Score = 546 (197.3 bits), Expect = 1.7e-109, Sum P(2) = 1.7e-109
Identities = 108/194 (55%), Positives = 152/194 (78%)
Query: 2 VVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQPI 61
V+LAA++ +K+GK +VSRQFV+M+R RIEGLLAAFPKL+ TGKQHT+VETE+VRYVYQP+
Sbjct: 43 VLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPM 102
Query: 62 EALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLGH 121
E LY++L+T K SNILEDLETLRL S+++PEY +L+E I + F+L+FAFDE+++LG+
Sbjct: 103 EKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRALEENEISEHCFDLIFAFDEIVALGY 162
Query: 122 KENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNR-GDK-- 178
+ENV +AQ++ + EM+SHEEK+ + V +++ E K M+RKA E+ +++ + R G K
Sbjct: 163 RENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKAP 222
Query: 179 --GGF-MSLQSMGS 189
GGF S S GS
Sbjct: 223 GFGGFGSSAVSGGS 236
>ZFIN|ZDB-GENE-040121-7 [details] [associations]
symbol:arcn1b "archain 1b" species:7955 "Danio rerio"
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
ZFIN:ZDB-GENE-040121-7 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 OMA:NNDVGVL
OrthoDB:EOG4FBHSQ EMBL:CR385077 EMBL:BC050499 EMBL:BC075749
IPI:IPI00506794 RefSeq:NP_973722.1 UniGene:Dr.75156 STRING:Q7ZU89
Ensembl:ENSDART00000047902 GeneID:399661 KEGG:dre:399661 CTD:399661
InParanoid:Q7ZU89 NextBio:20816615 Uniprot:Q7ZU89
Length = 512
Score = 553 (199.7 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 106/194 (54%), Positives = 150/194 (77%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MV+LAA++ +K+GK +VSRQFV+M+R R+EGLLAAFPKL+ TGKQHT+VET++VRYVYQP
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRVEGLLAAFPKLMNTGKQHTFVETDSVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E LY++L+T K SNILEDLETLRL S+++PEY L+E I + F+L+FAFDE+++LG
Sbjct: 61 LEKLYMVLITTKNSNILEDLETLRLFSRVIPEYCRVLEESEISEHCFDLIFAFDEIVALG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNR-GDKG 179
++ENV +AQ++ + EM+SHEEK+ + V +++ E K MKRKA E+ +++ + R G K
Sbjct: 121 YRENVNLAQIRTFTEMDSHEEKVFRAVRETQEREAKAEMKRKAKELQRARQDAERAGKKS 180
Query: 180 -GFMSLQSMGSGRI 192
GF S G I
Sbjct: 181 PGFGGFGSSGMSSI 194
Score = 540 (195.1 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 115/321 (35%), Positives = 193/321 (60%)
Query: 217 ATTDVETFSSKSKGRPPSSANAPPKGLGMQLG-KSQRTNQFLESLKAEGEVILEDVKPIA 275
AT +T + P+S ++LG K + + F++ LK+EGE I V A
Sbjct: 197 ATIITDTIEPEKPKVAPASVRPSGSSKALKLGAKGKEVDFFVDKLKSEGENI---VTTSA 253
Query: 276 GQSRXXXXXXXLTDPIT-----LTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLI 330
G+ + L P+ L VEEKI+++ RDGG+ N +V G ++L++ ++++G I
Sbjct: 254 GR-KASEASKVLQPPVNMESVHLRVEEKISLTCGRDGGLQNMEVLGMITLKVADEKNGRI 312
Query: 331 QVQIETGGNPGILFKTHPNMNKELFTHENILGLKDPNRPFP-QAKL----WRMQSADESM 385
+ + G +THP+++K+LFT+E+++GLK+ + FP + L WR+QS DES+
Sbjct: 313 IIVVNNNDKKGAQLQTHPHVDKKLFTNESLIGLKNQEKSFPLNSDLGVLKWRLQSTDESL 372
Query: 386 VPLTINCWPSVSGNETY--VSIEYEASTM-FDLRNVVISVPLPALREAPSVRQIDGEWRY 442
+PLTINCWPS SG+ + V+IEYE +L +VVI++P+P+ AP V +DG++ +
Sbjct: 373 IPLTINCWPSESGSGSGCDVNIEYELQDEGLELNDVVITIPVPSGVGAPVVGDLDGQYNH 432
Query: 443 DSRNSVLEWTILLIDNSNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLR 502
DSR ++LEW++ +ID N+SGS+EF + + FFPI+V F + + D++V + +
Sbjct: 433 DSRKNILEWSLPVIDEKNKSGSLEFSID-GKPNDFFPINVSFVSKRNFCDIQVAKVTYVE 491
Query: 503 GGAPPKFSQRTVLITENYQVV 523
GG+P KFS T + + Y+++
Sbjct: 492 GGSPVKFSSETSFVVDKYEIL 512
>FB|FBgn0028969 [details] [associations]
symbol:deltaCOP "delta-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0009306
"protein secretion" evidence=IMP] [GO:0007436 "larval salivary
gland morphogenesis" evidence=IMP] [GO:0035158 "regulation of tube
diameter, open tracheal system" evidence=IMP] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
GO:GO:0006886 GO:GO:0006911 EMBL:AE014298 GO:GO:0009306
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0010883 GO:GO:0035158 GO:GO:0007436
PANTHER:PTHR10121 GeneTree:ENSGT00390000017207 OMA:NNDVGVL
UniGene:Dm.6542 GeneID:45250 KEGG:dme:Dmel_CG14813 CTD:45250
FlyBase:FBgn0028969 GenomeRNAi:45250 NextBio:837953 EMBL:AY051528
RefSeq:NP_652012.1 SMR:Q9W555 IntAct:Q9W555 MINT:MINT-1564210
STRING:Q9W555 EnsemblMetazoa:FBtr0070371 UCSC:CG14813-RA
InParanoid:Q9W555 Uniprot:Q9W555
Length = 532
Score = 1043 (372.2 bits), Expect = 2.2e-105, P = 2.2e-105
Identities = 225/543 (41%), Positives = 333/543 (61%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MV++AA++ +K+GK+++SRQFV+M++ RIEGLLAAFPKL+ GKQHTYVET++VRYVYQP
Sbjct: 1 MVLIAAAVCTKNGKVILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E LY+LL+T K SNILEDLETLRL SK++PEYS+SLDE+ I + AF L+FAFDE+++LG
Sbjct: 61 MEKLYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVENAFNLIFAFDEIVALG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDKGG 180
++E+V +AQ+K + EM+SHEEK+++ V Q++ + + M+ KA E+ + ++E ++ +GG
Sbjct: 121 YRESVNLAQIKTFVEMDSHEEKVYQAVRQTQERDARQKMREKAKELQRQRMEASK--RGG 178
Query: 181 FMSLQSMGS--GRIEXXXXXXXXXXXXXXXXXXXXXXLATTDVETFSSKSKGRPPSSANA 238
SL +GS G + + DV+T SK+ P+S NA
Sbjct: 179 -PSLGGIGSRSGGFSADGIGSSGVSSSSGASSANTG-ITSIDVDT-KSKAAASKPASRNA 235
Query: 239 PPKGLGMQLGKSQRTNQFLESLKAEGEVI--LEDVKPIAGQSRXXXXXXXLT-------- 288
G GKS+ + F++ LK EGE I L P G S
Sbjct: 236 LKLG-----GKSKDVDSFVDQLKNEGEKIANLAPAAPAGGSSAAASASAAAKAAIASDIH 290
Query: 289 -DPITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILFKTH 347
+ + L +E+K+ V L RDGG+ F+ G L+L+I ++ G I +++ G+ +TH
Sbjct: 291 KESVHLKIEDKLVVRLGRDGGVQQFENSGLLTLRITDEAYGRILLKLSPNHTQGLQLQTH 350
Query: 348 PNMNKELFTHENILGLKDPNRPFPQ-----AKLWRMQSADESMVPLTINCWPSVSGNETY 402
PN++KELF +GLK+ +PFP WR S DES VPLTINCWPS +G
Sbjct: 351 PNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRFVSQDESAVPLTINCWPSDNGEGGC 410
Query: 403 -VSIEYEASTM-FDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDNSN 460
V+IEYE +L++V I +PLP + PSV + DG + YDSR VL+W I +ID +N
Sbjct: 411 DVNIEYELEAQQLELQDVAIVIPLP-MNVQPSVAEYDGTYNYDSRKHVLQWHIPIIDAAN 469
Query: 461 RSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAPPKFSQRTVLITENY 520
+SGSMEF + FFP+ V F + + Y+ + +++ + A K+S ++L E Y
Sbjct: 470 KSGSMEFSCSASIPGDFFPLQVSFVSKTPYAGVVAQDVVQVDSEAAVKYSSESILFVEKY 529
Query: 521 QVV 523
++V
Sbjct: 530 EIV 532
>WB|WBGene00015734 [details] [associations]
symbol:C13B9.3 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0016192 GO:GO:0018996
GO:GO:0000003 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030663 eggNOG:NOG309668
HOGENOM:HOG000203984 PANTHER:PTHR10121 GeneTree:ENSGT00390000017207
OMA:NNDVGVL EMBL:FO080523 PIR:C88487 RefSeq:NP_498463.1
ProteinModelPortal:Q09236 DIP:DIP-26714N MINT:MINT-1070043
STRING:Q09236 PaxDb:Q09236 PRIDE:Q09236 EnsemblMetazoa:C13B9.3
GeneID:175940 KEGG:cel:CELE_C13B9.3 UCSC:C13B9.3 CTD:175940
WormBase:C13B9.3 InParanoid:Q09236 NextBio:890392 Uniprot:Q09236
Length = 515
Score = 830 (297.2 bits), Expect = 8.2e-83, P = 8.2e-83
Identities = 197/545 (36%), Positives = 306/545 (56%)
Query: 1 MVVLAASIVSKSGKILVSRQFV-DMSRIRIEGLLAAFPKLVGTGK-----QHTYVETENV 54
MV++AA I+SK+GK+LV+RQFV DM R R+EGL+ AFPKL+G K QHT+VET++V
Sbjct: 1 MVLIAACILSKTGKLLVARQFVNDMMRSRLEGLVDAFPKLIGNEKEAATRQHTFVETDSV 60
Query: 55 RYVYQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFD 114
RYVY P++ +YL+LVT K SNILEDLETLRL +++PEY S +E+ I F+L+FAFD
Sbjct: 61 RYVYHPLDNIYLVLVTTKNSNILEDLETLRLFVRVIPEYCRSNEEKEILAHDFDLIFAFD 120
Query: 115 EVISLGHKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEK- 173
EV++LG++E+V +AQ++ + EM+SHEE++ + +++ K M KA E+ +++ E
Sbjct: 121 EVVTLGYRESVNLAQIRTFTEMDSHEERVFMQIKEAQEKAAKQAMAEKAKELKRAQKEAL 180
Query: 174 NRGDKGGFMSLQSMGSGRIEXXXXXXXXXXXXXXXXXXXXXXLATTDVETFSSKSKGRPP 233
+RG K + S + S +T + S + RP
Sbjct: 181 SRGLKPSYQSSTGISSS--------------------------STPNAAAVSEPAAPRP- 213
Query: 234 SSANAPPKGLGMQL---GKSQRTNQFLESLKAEGEVILEDVKPIAGQSRXXXXXXXLTDP 290
SA P G G L GK+ + FL++L+ +G+ I K T P
Sbjct: 214 -SAPKGPIGGGKALKLGGKTNNEDDFLDTLRQQGQSIAPVQKASLSGGVSSLAAPISTAP 272
Query: 291 ------ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILF 344
+ + EEKIN + RDGG+ + +VQ T++L I + E I +++ G G
Sbjct: 273 RVKREVVHVRTEEKINTRVSRDGGLESGEVQATVTLSIGSPEFIPISIKMNNGSAAGTQL 332
Query: 345 KTHPNMNKELFTHENILGLKDPNRPFPQAK-----LWRMQSADESMVPLTINCWPSVSGN 399
+ HPN++K+ + + L +K +P+P W+M ++E +P++ NCWP S +
Sbjct: 333 QVHPNLDKKEWQSSSTLKIKPNGKPYPVNSDVGILKWKMALSEEEQLPISFNCWPQESSD 392
Query: 400 ETYVSIEYEASTM-FDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDN 458
V+IEY L NV I VPLP APSV + DGE+ Y +V+ W++ +ID+
Sbjct: 393 GVQVNIEYTLQREDITLNNVRIIVPLPTAT-APSVGECDGEYEYHKTKNVIVWSLAVIDS 451
Query: 459 SNRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAPPKFSQRTVLITE 518
SN SG++EF VP FFP+SV F++ + + + V ++ G+P +S T +E
Sbjct: 452 SNSSGTLEFSVPNGHCDHFFPVSVGFTSENLFVPITVQKVVK-NDGSPVTYSVETTFNSE 510
Query: 519 NYQVV 523
N+++V
Sbjct: 511 NFEIV 515
>ASPGD|ASPL0000062974 [details] [associations]
symbol:AN0922 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0051645 "Golgi localization"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0048313 "Golgi inheritance"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
EMBL:BN001308 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:AACD01000014 eggNOG:NOG309668
HOGENOM:HOG000203984 PANTHER:PTHR10121 OrthoDB:EOG41VPBJ
RefSeq:XP_658526.1 STRING:Q5BEV8 EnsemblFungi:CADANIAT00001733
GeneID:2876697 KEGG:ani:AN0922.2 OMA:KETINAE Uniprot:Q5BEV8
Length = 516
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 182/543 (33%), Positives = 298/543 (54%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MVVLAASI ++ GK ++SRQF +++R R+E LLA+FPKL +G QHT VE +NVR+VYQP
Sbjct: 1 MVVLAASICTRGGKAVLSRQFREIARSRVEALLASFPKLADSGTQHTTVEQDNVRFVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
++ LY++L+TN+QSNIL+D+++L L +++ SLDE I + AFELL A+DE+++LG
Sbjct: 61 LDELYIVLITNRQSNILQDIDSLHLFAQVTTSICKSLDEREILRNAFELLSAYDELVTLG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDKGG 180
++EN++++Q+K + EMESHEE++ +++ ++K E + KRKA +++ + E R +
Sbjct: 121 YRENLSLSQIKTFLEMESHEERIQEIIERNKELEASEERKRKAKQLEMQRKEAARNSRN- 179
Query: 181 FMSLQSMGSGRIEXXXXXXXXXXXXXXXXXXXXXXLATTDVETFSSKSKGRPPSSANA-P 239
A D T+ S + + A P
Sbjct: 180 -------------------IAPRAPSYPVYTPPSRPAVPD--TYDSYEAEKKKTFAKPLP 218
Query: 240 PKGLGMQLGKSQRTNQFLESLKAEGEVILEDVKP-IAGQS------RXXXXXXXLT---D 289
+G GMQLGK +T E ++ + E+ P + Q+ R L+ D
Sbjct: 219 TRGKGMQLGKKSKTTDIYEKVRGDLGPEAEESSPLVTPQASTPVAERVSSARPSLSADRD 278
Query: 290 PITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNP--GILFKTH 347
PI +T+ E I+ SL RDG + +F+V+G L L+I + +++++ NP G F+TH
Sbjct: 279 PIHITIAETISASLTRDGALKSFEVKGDLQLRI--SDPAFTKLRLDLLANPTHGAQFRTH 336
Query: 348 PNMNKELFTHENILGLKDPNRPFPQAKL-----WRMQ---SADESMVPLTINCWPSVSGN 399
PN++K F++ +I+ LKD ++ FP WR+ S + ++P+T W + +
Sbjct: 337 PNVDKAAFSNSSIIQLKDTSKRFPANNSIGVLRWRVAGSGSDNADVLPITFTVWLNKGSD 396
Query: 400 ETYVSIEYEASTMFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDNS 459
T V++EYE + LR+VV+++P P+V D Y+ L+W I +D +
Sbjct: 397 STTVTVEYELTGSDSLRDVVVTIPYGTAE--PAVSSFDAV--YEVSGDSLDWNIGNVDEN 452
Query: 460 NRSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAPPKFSQRTVLITEN 519
N S S EF D + FFP++VRFS S + ++ V NI + G +S+ + E
Sbjct: 453 NASSSFEFESTADDENEFFPMTVRFSKASPFVEVDVTNISLIEEGESTGYSKDIKSVAEG 512
Query: 520 YQV 522
Y +
Sbjct: 513 YLI 515
>UNIPROTKB|G4MP14 [details] [associations]
symbol:MGG_05676 "Coatomer subunit delta" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886
GO:GO:0016192 EMBL:CM001231 GO:GO:0030131 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 PANTHER:PTHR10121
RefSeq:XP_003710575.1 EnsemblFungi:MGG_05676T0 GeneID:2675981
KEGG:mgr:MGG_05676 Uniprot:G4MP14
Length = 514
Score = 747 (268.0 bits), Expect = 5.1e-74, P = 5.1e-74
Identities = 180/541 (33%), Positives = 294/541 (54%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MVVLAASI ++ GK ++SRQF +M R RIE LLA+FPKL +G QHT VE +NVR+VYQP
Sbjct: 1 MVVLAASICTRGGKAVLSRQFREMPRSRIEALLASFPKLADSGTQHTTVEQDNVRFVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
++ LY++L+TN+QSNIL+D+++L L +++V SLDE I K A+ELL AFDE+++LG
Sbjct: 61 LDELYMVLITNRQSNILQDIDSLHLFAQVVTSTCKSLDEREILKNAYELLSAFDELVTLG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDKGG 180
++EN+T++Q+K + EMESHEE++ +++ ++K E + KRKA +++ + E R + G
Sbjct: 121 YRENLTISQIKTFLEMESHEERIQEIIARNKELEATEERKRKAKQLEMQRKESARSGRPG 180
Query: 181 FMSLQSMGSGRIEXXXXXXXXXXXXXXXXXXXXXXLATTDV-ETFSSKSKGRPPSSANAP 239
G+ R A TD +T+ ++ K + +A
Sbjct: 181 -------GAQRAPVYPTYTPPSRP------------AVTDTYDTYEAE-KNKSKFTA--- 217
Query: 240 PKGLGMQLGKSQRTNQFLESLKAEGEVILEDVK---------PIAGQSRXXXXXXXLTDP 290
PKG GMQLGK +T E ++ + ++D P+A + D
Sbjct: 218 PKGKGMQLGKKSKTTDMFERVRGDMGNEIDDTPLVAPTASAAPLASEPPRRQSVGTDRDS 277
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILFKTHPNM 350
I +TV E I + R+G +++ V+G L+L++ + I++Q+ G F+THPN+
Sbjct: 278 IHITVSENITAKISREGTLNSLGVKGDLNLRVSDPTMTKIKLQLVANPTHGAQFRTHPNV 337
Query: 351 NKELFTHENILGLKDPNRPFPQAKL-----WRM--QSADESMVPLTINCWPSVS--GNET 401
++ LF ++ + +R FP W ++ D S +P++ W + GN T
Sbjct: 338 DRNLFNSSKVIQMSKADRGFPVNNSVGVLRWMATPKADDTSALPISFTVWVNKGSDGNCT 397
Query: 402 YVSIEYEASTMFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDNSNR 461
+++EYE + +LR+V +S+P + P+V D + N LEW I ++ N
Sbjct: 398 -LTVEYELTGGDELRDVSVSIPYSSTE--PTVSSFDATYEVSGDN--LEWAIGTVNEENA 452
Query: 462 SGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAPPKFSQRTVLITENYQ 521
+GS EF D + FFP+ VRFS T+ + D+ + ++ L FS+ + Y
Sbjct: 453 NGSFEFEAMADDENEFFPMQVRFSKTTPFVDVDISSVTLLEMNEEVTFSKDVRCTADTYL 512
Query: 522 V 522
+
Sbjct: 513 I 513
>CGD|CAL0000185 [details] [associations]
symbol:RET2 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0051645 "Golgi localization" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0048313 "Golgi inheritance" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 CGD:CAL0000185 GO:GO:0006886
GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:AACQ01000021 EMBL:AACQ01000022
eggNOG:NOG309668 PANTHER:PTHR10121 RefSeq:XP_720546.1
RefSeq:XP_720673.1 ProteinModelPortal:Q5AGE3 STRING:Q5AGE3
GeneID:3637630 GeneID:3637714 KEGG:cal:CaO19.11711
KEGG:cal:CaO19.4236 Uniprot:Q5AGE3
Length = 573
Score = 461 (167.3 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 108/276 (39%), Positives = 160/276 (57%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGK-QHTYVETENVRYVYQ 59
MVVL+ASI ++ GK L+SRQF D+SR RI LLA FP L+ QHT VE ENVRYVYQ
Sbjct: 1 MVVLSASICTRGGKALLSRQFRDISRDRITALLANFPSLISNSSGQHTSVEDENVRYVYQ 60
Query: 60 PIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISL 119
P+E Y++L+TNK SNIL+D++TL L + V ++DE I +++FE++ AFDEVISL
Sbjct: 61 PLEEFYIVLITNKTSNILQDIDTLHLFASTVSNLLRNIDEREIFESSFEIIDAFDEVISL 120
Query: 120 GHKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDKG 179
G+KEN+T+ QV+ + EM+SHEEK+ +++ ++K E + KR+A EI + ++ + D+
Sbjct: 121 GYKENLTLTQVQTFLEMDSHEEKIQEIIERNKELEATEERKRRAKEIQRKEMARKTMDQ- 179
Query: 180 GFMSLQSMGSGRIEXXXXXXXXXXXXXXXXXXXXXXLATTDVETFSSKSKGRPPSSANAP 239
L S S + + TT + S + S +
Sbjct: 180 ----LHSGASAGVGTSSFGYDSYQNNHQPTYKPTPVVETT--HSAGSNTTSSSTHSLLSK 233
Query: 240 PKGLGMQLGKSQRT-NQFLESLKAEGEVILEDVKPI 274
P+G G+QLG + T + L S E +L +P+
Sbjct: 234 PRGGGLQLGGKKTTAGRTLPSGNGAHEPLLATNQPV 269
Score = 214 (80.4 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 64/212 (30%), Positives = 107/212 (50%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILFKTHPNM 350
I +TV EK++ L RDG +S+ +V+G L L+I E ++ ++ G+ FKTHPN+
Sbjct: 316 ILITVNEKVSAQLSRDGSISSSEVKGDLQLRINQTELANAKILLKIAGDKK-QFKTHPNV 374
Query: 351 NKELFTHENILGLKDPNRPFPQ------AKLWRM--QSADESMVPLTINCWPSVSGN-ET 401
++ LF E+ + +KD ++ FP WR + D S+VP+ W S++ +
Sbjct: 375 DRNLFQSESHISVKDKSKTFPSNDQPLGVLRWRSVGKQDDTSLVPIVFTIWVSINEEGQA 434
Query: 402 YVSIEYEASTMF-----DLRNVV-ISVPLPALREAPSVRQIDG---EWRYDSRNSV-LEW 451
V++EYE + F + NV + + +P L + +V DG Y+ + + +
Sbjct: 435 QVTVEYELTNEFVETHPNHPNVENLKILVPVLTD--NVHLQDGGNDTVSYELYDGQGVVF 492
Query: 452 TILLIDNSNRSGSMEFVVPPADSSSFFPISVR 483
I I + GS EF VP D S FP+ V+
Sbjct: 493 NIGTIAIDDPQGSFEFTVPVVDEDSLFPMQVQ 524
>UNIPROTKB|Q5AGE3 [details] [associations]
symbol:RET2 "Putative uncharacterized protein RET2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
CGD:CAL0000185 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
EMBL:AACQ01000021 EMBL:AACQ01000022 eggNOG:NOG309668
PANTHER:PTHR10121 RefSeq:XP_720546.1 RefSeq:XP_720673.1
ProteinModelPortal:Q5AGE3 STRING:Q5AGE3 GeneID:3637630
GeneID:3637714 KEGG:cal:CaO19.11711 KEGG:cal:CaO19.4236
Uniprot:Q5AGE3
Length = 573
Score = 461 (167.3 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 108/276 (39%), Positives = 160/276 (57%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGK-QHTYVETENVRYVYQ 59
MVVL+ASI ++ GK L+SRQF D+SR RI LLA FP L+ QHT VE ENVRYVYQ
Sbjct: 1 MVVLSASICTRGGKALLSRQFRDISRDRITALLANFPSLISNSSGQHTSVEDENVRYVYQ 60
Query: 60 PIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISL 119
P+E Y++L+TNK SNIL+D++TL L + V ++DE I +++FE++ AFDEVISL
Sbjct: 61 PLEEFYIVLITNKTSNILQDIDTLHLFASTVSNLLRNIDEREIFESSFEIIDAFDEVISL 120
Query: 120 GHKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDKG 179
G+KEN+T+ QV+ + EM+SHEEK+ +++ ++K E + KR+A EI + ++ + D+
Sbjct: 121 GYKENLTLTQVQTFLEMDSHEEKIQEIIERNKELEATEERKRRAKEIQRKEMARKTMDQ- 179
Query: 180 GFMSLQSMGSGRIEXXXXXXXXXXXXXXXXXXXXXXLATTDVETFSSKSKGRPPSSANAP 239
L S S + + TT + S + S +
Sbjct: 180 ----LHSGASAGVGTSSFGYDSYQNNHQPTYKPTPVVETT--HSAGSNTTSSSTHSLLSK 233
Query: 240 PKGLGMQLGKSQRT-NQFLESLKAEGEVILEDVKPI 274
P+G G+QLG + T + L S E +L +P+
Sbjct: 234 PRGGGLQLGGKKTTAGRTLPSGNGAHEPLLATNQPV 269
Score = 214 (80.4 bits), Expect = 1.8e-64, Sum P(2) = 1.8e-64
Identities = 64/212 (30%), Positives = 107/212 (50%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILFKTHPNM 350
I +TV EK++ L RDG +S+ +V+G L L+I E ++ ++ G+ FKTHPN+
Sbjct: 316 ILITVNEKVSAQLSRDGSISSSEVKGDLQLRINQTELANAKILLKIAGDKK-QFKTHPNV 374
Query: 351 NKELFTHENILGLKDPNRPFPQ------AKLWRM--QSADESMVPLTINCWPSVSGN-ET 401
++ LF E+ + +KD ++ FP WR + D S+VP+ W S++ +
Sbjct: 375 DRNLFQSESHISVKDKSKTFPSNDQPLGVLRWRSVGKQDDTSLVPIVFTIWVSINEEGQA 434
Query: 402 YVSIEYEASTMF-----DLRNVV-ISVPLPALREAPSVRQIDG---EWRYDSRNSV-LEW 451
V++EYE + F + NV + + +P L + +V DG Y+ + + +
Sbjct: 435 QVTVEYELTNEFVETHPNHPNVENLKILVPVLTD--NVHLQDGGNDTVSYELYDGQGVVF 492
Query: 452 TILLIDNSNRSGSMEFVVPPADSSSFFPISVR 483
I I + GS EF VP D S FP+ V+
Sbjct: 493 NIGTIAIDDPQGSFEFTVPVVDEDSLFPMQVQ 524
>DICTYBASE|DDB_G0268702 [details] [associations]
symbol:copD "coatomer protein complex delta subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0030663 "COPI-coated vesicle membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
dictyBase:DDB_G0268702 GO:GO:0006886 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0016192 EMBL:AAFI02000004 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
GO:GO:0030663 eggNOG:NOG309668 PANTHER:PTHR10121 OMA:SMESHEE
RefSeq:XP_646874.1 ProteinModelPortal:Q55EZ6 STRING:Q55EZ6
PRIDE:Q55EZ6 EnsemblProtists:DDB0305305 GeneID:8616557
KEGG:ddi:DDB_G0268702 ProtClustDB:CLSZ2846938 Uniprot:Q55EZ6
Length = 540
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 148/356 (41%), Positives = 218/356 (61%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MVVLAA+I +K+GK L+SRQF +M++ R+EGLLAAFPKL+G G+QHT++ETEN+RYVYQP
Sbjct: 1 MVVLAAAICTKNGKALLSRQFSEMTKSRVEGLLAAFPKLIGLGRQHTFIETENIRYVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
+E+LY++L+TNK SNILEDLETL LL+KLVPEYS + DE I K AFEL+F FDEVI++G
Sbjct: 61 LESLYIVLITNKNSNILEDLETLHLLAKLVPEYS-NFDEYDISKNAFELIFTFDEVIAMG 119
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKN-RGDK- 178
+KE VT+ Q+K + MESHEE+ ++ + K E + + KA EI++ + E+ RG +
Sbjct: 120 YKERVTLQQIKHFISMESHEEERFRMEEKIKQKEAQILASSKAKEIERMRHEEMLRGKRS 179
Query: 179 GGFMSLQS---MGSGRIEXXXXXXXXXXXXXXXXXXXXXXLATTDVETFSSKSKGR---P 232
GG+ + MGSG + + +++ + R P
Sbjct: 180 GGYTGISGGGGMGSGGMGSNQYRDNDRDNYHSNNNNNNNNNNNNNNNNNNNRDRDRGDSP 239
Query: 233 ----PSSANAPPKGLGMQLGKSQRTNQ---FLESLKAEGEVI-LEDVKPIAGQSRXXXXX 284
PS+A++ +G GM LG TN+ + LK E V +EDV+ + S+
Sbjct: 240 NTSRPSAASSGSQG-GMILGGKSGTNKNSAIAQVLKEEKIVEKVEDVEQLL-DSQISQIP 297
Query: 285 XXLTDP---ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETG 337
T P + +TVEE ++ DG + + D++G LS+QI +Q G ++V ++ G
Sbjct: 298 ETPTVPQEGVHITVEESFTSFVESDGTVESIDIKGGLSVQINDQSLGKVKVNLKQG 353
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 104/300 (34%), Positives = 170/300 (56%)
Query: 233 PSSANAPPKGLGMQLGKSQRTNQ---FLESLKAEGEVI-LEDVKPIAGQSRXXXXXXXLT 288
PS+A++ +G GM LG TN+ + LK E V +EDV+ + S+ T
Sbjct: 244 PSAASSGSQG-GMILGGKSGTNKNSAIAQVLKEEKIVEKVEDVEQLL-DSQISQIPETPT 301
Query: 289 DP---ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGG-NPGILF 344
P + +TVEE ++ DG + + D++G LS+QI +Q G ++V ++ G + F
Sbjct: 302 VPQEGVHITVEESFTSFVESDGTVESIDIKGGLSVQINDQSLGKVKVNLKQGKLSKQFQF 361
Query: 345 KTHPNMNKELFTHENILGLKDPNRPFPQAKL--WRMQSADESMVPLTINCWPSVSGNETY 402
THPN++K LF +++L L+D + FP + WR ++ ESM+P+ +NCWPS + T
Sbjct: 362 ITHPNIDKALFGEQSVLRLRDGGKGFPSGGILKWRCKTNQESMMPIRVNCWPSPGRDSTT 421
Query: 403 VSIEYEASTMFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDNSNRS 462
V++EY++ ++L++V I +P P AP + Q DG + YD++ + W I LID+SNR
Sbjct: 422 VNLEYDSLVGYELKSVFIVIPNPT-SNAPIINQFDGLYEYDNKQKCVIWKIPLIDDSNRQ 480
Query: 463 GSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNIIPLRGGAPPKFSQRTVLITENYQV 522
GSMEF V ++ SFFP+ ++F+A+ T D V ++ FS T L + Y++
Sbjct: 481 GSMEFSVK-GNTQSFFPVKIQFTASQTICDTTVGSVFVEDSNQSTNFSTETTLSVDTYEI 539
>SGD|S000001947 [details] [associations]
symbol:RET2 "Delta subunit of the coatomer complex (COPI)"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA;IMP] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IMP] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS;IMP] [GO:0048313 "Golgi inheritance" evidence=IGI]
[GO:0051645 "Golgi localization" evidence=IGI] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030663
"COPI-coated vesicle membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 SGD:S000001947
GO:GO:0006886 EMBL:D50617 EMBL:BK006940 GO:GO:0051645 GO:GO:0006888
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0030126 GO:GO:0006890 eggNOG:NOG309668
HOGENOM:HOG000203984 PANTHER:PTHR10121 OMA:SMESHEE
GeneTree:ENSGT00390000017207 OrthoDB:EOG41VPBJ PIR:S56306
RefSeq:NP_116709.3 RefSeq:NP_116711.3 ProteinModelPortal:P43621
SMR:P43621 DIP:DIP-5255N IntAct:P43621 MINT:MINT-548122
STRING:P43621 PaxDb:P43621 PeptideAtlas:P43621 EnsemblFungi:YFR051C
GeneID:850612 GeneID:850614 KEGG:sce:YFR051C KEGG:sce:YFR053C
KO:K00844 NextBio:966502 Genevestigator:P43621 GermOnline:YFR051C
GO:GO:0048313 Uniprot:P43621
Length = 546
Score = 404 (147.3 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 84/185 (45%), Positives = 127/185 (68%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGT-GKQHTYVETENVRYVYQ 59
MVVLAASI ++ GK L+SRQF D+S+ R+ LL+ F LV HT+VE ++VRYVY+
Sbjct: 1 MVVLAASITTRQGKPLLSRQFKDLSKDRVLELLSNFQNLVSEISSDHTFVEDKHVRYVYR 60
Query: 60 PIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISL 119
P + Y++L+TN+QSNI++DL TL L S+ + Y S ++ I AFE+L +FDE++S+
Sbjct: 61 PFDNYYIILITNRQSNIIKDLATLNLFSQTINSYLSSFQDQEIFHNAFEILSSFDEIVSM 120
Query: 120 G-HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDK 178
G +KEN++ QV+ Y MESHEE++ +++ ++K E + KR+A EI + + E+ K
Sbjct: 121 GGYKENLSFTQVQTYLSMESHEERIQEIIERNKEIEATEERKRRAKEIARKEHER----K 176
Query: 179 GGFMS 183
GFMS
Sbjct: 177 HGFMS 181
Score = 181 (68.8 bits), Expect = 5.4e-55, Sum P(2) = 5.4e-55
Identities = 55/216 (25%), Positives = 106/216 (49%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETG---GNPGILFKTH 347
I ++++E IN RDG + + +++G L L+I + + +++ + FKTH
Sbjct: 291 ILISIKEVINAEFSRDGTIHSSELKGVLELRINDHDLSHSNLKLADSIDVRDKSFQFKTH 350
Query: 348 PNMNKELFTHENILGLKDPNRPFP--QAKL----WRM--QSADESMVPLTINCW--PSVS 397
PN++K+ F ++ L+D ++ FP L WR + D+S++PLT+ W PS S
Sbjct: 351 PNIDKQSFLSTKLISLRDKSKAFPANDQSLGVLRWRKVAPAEDDSLIPLTLTTWVSPSES 410
Query: 398 GNETYVSIEYEASTMFDLRNVVISVPLPALREAPSVRQIDGEWRYDSR--NSVLEW-TIL 454
V IEYE+ +L +V+ ++P+ + P + D+ N E T +
Sbjct: 411 QQGFDVIIEYESVLETELADVIFTIPV--FPQEPVDINTESSTCSDAEVVNMDQEMGTSI 468
Query: 455 LIDN--SNRSGSMEFVVPPADSSSFFPISVRFSATS 488
I +N +G++ F + + +P++V F ++
Sbjct: 469 KISKIAANDAGALAFTIEAPYEDALYPMTVSFQEST 504
>GENEDB_PFALCIPARUM|PF11_0359 [details] [associations]
symbol:PF11_0359 "coatomer delta subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 PROSITE:PS51072 GO:GO:0005737
GO:GO:0006886 GO:GO:0030131 SUPFAM:SSF64356 GO:GO:0006890
EMBL:AE014186 PANTHER:PTHR10121 OMA:KETINAE RefSeq:XP_001348030.1
ProteinModelPortal:Q8II16 EnsemblProtists:PF11_0359:mRNA
GeneID:810906 KEGG:pfa:PF11_0359 EuPathDB:PlasmoDB:PF3D7_1134800
HOGENOM:HOG000282444 ProtClustDB:CLSZ2433355 Uniprot:Q8II16
Length = 487
Score = 362 (132.5 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 76/185 (41%), Positives = 123/185 (66%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQ-HTYVETENVRYVYQ 59
M VL+A I +KS KILVSRQF ++S+ ++ L F L+ + HTY+ET+ VRYVYQ
Sbjct: 1 MTVLSAVISTKS-KILVSRQFRNISKCDLDSLTIPFHNLIERERSDHTYIETDKVRYVYQ 59
Query: 60 PIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSY-SLDEEGICKTAFELLFAFDEVIS 118
P++ +Y+ L+TN SNI+EDLE +++LS+++ + +++E I K F ++F DE+I
Sbjct: 60 PLDNIYIFLITNINSNIIEDLEIIKVLSQIIQDICQGNINESTILKKCFTIIFYIDELIK 119
Query: 119 LGHKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDK 178
G +E V Q+K Y EMESHEEKL ++ ++K E K+ K AS+++K++ ++++
Sbjct: 120 NGVREIVNSNQIKTYIEMESHEEKLQTIIRENKEKEEKERRKFIASKLEKNRQKQSKVSS 179
Query: 179 GGFMS 183
F+S
Sbjct: 180 NSFLS 184
Score = 195 (73.7 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 57/218 (26%), Positives = 105/218 (48%)
Query: 290 PITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILFKTHPN 349
PI + + E I +L +G + + D+QGT +LQI N + V+++ + K HP
Sbjct: 253 PINIIITENIICTLSSEGTLCDLDIQGTFNLQINNHNYSKVIVELDNEYSEKA--KIHPI 310
Query: 350 MNKELFTHENILGLKDPNRPF------PQAKLWRMQSADESMVPLTINCWPSVSGNETYV 403
++K + + NIL LKD ++ F P K W++ ++S +PL I+CWP T +
Sbjct: 311 LDKNKY-NSNILELKDKSKNFRINTIYPLLK-WKINHINDSYIPLNISCWPCEDNESTLL 368
Query: 404 SIEYEASTMFD---LRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDNSN 460
S+E E + + ++ +++ P+ + + G +D +L W + + N N
Sbjct: 369 SLEIENKRNNNDELIYDLNVNLMCPSAHKPQIISNDKGIIEHDG--VLLAWKVDELKN-N 425
Query: 461 RSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNI 498
+S +E + A+ S FP SV + L V+ +
Sbjct: 426 QSCQIEMSIQ-ANPESVFPFSVEAKSNMLAHKLNVLKV 462
>UNIPROTKB|Q8II16 [details] [associations]
symbol:PF11_0359 "Coatomer delta subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISS] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 PROSITE:PS51072 GO:GO:0005737 GO:GO:0006886
GO:GO:0030131 SUPFAM:SSF64356 GO:GO:0006890 EMBL:AE014186
PANTHER:PTHR10121 OMA:KETINAE RefSeq:XP_001348030.1
ProteinModelPortal:Q8II16 EnsemblProtists:PF11_0359:mRNA
GeneID:810906 KEGG:pfa:PF11_0359 EuPathDB:PlasmoDB:PF3D7_1134800
HOGENOM:HOG000282444 ProtClustDB:CLSZ2433355 Uniprot:Q8II16
Length = 487
Score = 362 (132.5 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 76/185 (41%), Positives = 123/185 (66%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQ-HTYVETENVRYVYQ 59
M VL+A I +KS KILVSRQF ++S+ ++ L F L+ + HTY+ET+ VRYVYQ
Sbjct: 1 MTVLSAVISTKS-KILVSRQFRNISKCDLDSLTIPFHNLIERERSDHTYIETDKVRYVYQ 59
Query: 60 PIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSY-SLDEEGICKTAFELLFAFDEVIS 118
P++ +Y+ L+TN SNI+EDLE +++LS+++ + +++E I K F ++F DE+I
Sbjct: 60 PLDNIYIFLITNINSNIIEDLEIIKVLSQIIQDICQGNINESTILKKCFTIIFYIDELIK 119
Query: 119 LGHKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNRGDK 178
G +E V Q+K Y EMESHEEKL ++ ++K E K+ K AS+++K++ ++++
Sbjct: 120 NGVREIVNSNQIKTYIEMESHEEKLQTIIRENKEKEEKERRKFIASKLEKNRQKQSKVSS 179
Query: 179 GGFMS 183
F+S
Sbjct: 180 NSFLS 184
Score = 195 (73.7 bits), Expect = 4.8e-52, Sum P(2) = 4.8e-52
Identities = 57/218 (26%), Positives = 105/218 (48%)
Query: 290 PITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILFKTHPN 349
PI + + E I +L +G + + D+QGT +LQI N + V+++ + K HP
Sbjct: 253 PINIIITENIICTLSSEGTLCDLDIQGTFNLQINNHNYSKVIVELDNEYSEKA--KIHPI 310
Query: 350 MNKELFTHENILGLKDPNRPF------PQAKLWRMQSADESMVPLTINCWPSVSGNETYV 403
++K + + NIL LKD ++ F P K W++ ++S +PL I+CWP T +
Sbjct: 311 LDKNKY-NSNILELKDKSKNFRINTIYPLLK-WKINHINDSYIPLNISCWPCEDNESTLL 368
Query: 404 SIEYEASTMFD---LRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDNSN 460
S+E E + + ++ +++ P+ + + G +D +L W + + N N
Sbjct: 369 SLEIENKRNNNDELIYDLNVNLMCPSAHKPQIISNDKGIIEHDG--VLLAWKVDELKN-N 425
Query: 461 RSGSMEFVVPPADSSSFFPISVRFSATSTYSDLKVVNI 498
+S +E + A+ S FP SV + L V+ +
Sbjct: 426 QSCQIEMSIQ-ANPESVFPFSVEAKSNMLAHKLNVLKV 462
>POMBASE|SPCC285.08 [details] [associations]
symbol:ret2 "coatomer delta subunit Ret2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] InterPro:IPR011012
InterPro:IPR027059 PomBase:SPCC285.08 GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006888
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 GO:GO:0030126
GO:GO:0006890 eggNOG:NOG309668 PANTHER:PTHR10121 PIR:T41254
RefSeq:NP_588336.1 ProteinModelPortal:O74496 STRING:O74496
EnsemblFungi:SPCC285.08.1 GeneID:2538953 KEGG:spo:SPCC285.08
OMA:YLEMESH OrthoDB:EOG41VPBJ NextBio:20800128 Uniprot:O74496
Length = 240
Score = 456 (165.6 bits), Expect = 3.5e-43, P = 3.5e-43
Identities = 88/175 (50%), Positives = 130/175 (74%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
MVVLA SIV++ GK ++SRQF +MSR+R+E LL++FP LV Q+T VE++NVR+VYQP
Sbjct: 1 MVVLAVSIVNRGGKAIISRQFREMSRVRVESLLSSFPALVSEKSQNTTVESDNVRFVYQP 60
Query: 61 IEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLG 120
++ LY++L+TN QSNIL+D++TL LLS++V SL+E I + AFE+ AFDE SLG
Sbjct: 61 LDELYIVLITNLQSNILQDIDTLHLLSQVVTSICSSLEEREILEYAFEIFTAFDEATSLG 120
Query: 121 HKENVTVAQVKQYCEMESHEEKLHKLVVQSKINETKDVMKRKASEIDKSKIEKNR 175
+++NV++ Q+K Y EMESHEEK+ ++V ++K E + KR+ +++ K E R
Sbjct: 121 YRDNVSLTQIKTYLEMESHEEKIQEIVSRNKEIEATEERKRRIKQLELQKKEAAR 175
>UNIPROTKB|E9PK34 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9606 "Homo
sapiens" [GO:0006890 "retrograde vesicle-mediated transport, Golgi
to ER" evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR027059 PANTHER:PTHR10121 EMBL:AP000941 HGNC:HGNC:649
ChiTaRS:ARCN1 IPI:IPI00984360 ProteinModelPortal:E9PK34
Ensembl:ENST00000534182 ArrayExpress:E9PK34 Bgee:E9PK34
Uniprot:E9PK34
Length = 83
Score = 208 (78.3 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 39/55 (70%), Positives = 51/55 (92%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVR 55
MV+LAA++ +K+GK +VSRQFV+M+R RIEGLLAAFPKL+ TGKQHT+VETE++R
Sbjct: 1 MVLLAAAVCTKAGKAIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESIR 55
>CGD|CAL0004774 [details] [associations]
symbol:APM1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0051286 "cell tip" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0032153 "cell
division site" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0030121 "AP-1 adaptor
complex" evidence=IEA] [GO:0030276 "clathrin binding" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0006896 "Golgi to vacuole
transport" evidence=IEA] [GO:0060237 "regulation of fungal-type
cell wall organization" evidence=IEA] [GO:0071775 "regulation of
cell cycle cytokinesis" evidence=IEA] [GO:0032889 "regulation of
vacuole fusion, non-autophagic" evidence=IEA] [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990 PROSITE:PS00991
PROSITE:PS51072 CGD:CAL0004774 GO:GO:0006886 GO:GO:0071216
GO:GO:0036180 GO:GO:0016192 GO:GO:0009267 GO:GO:0036170
GO:GO:0030131 eggNOG:NOG315786 HOGENOM:HOG000173247 KO:K12393
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
EMBL:AACQ01000012 EMBL:AACQ01000011 RefSeq:XP_721944.1
RefSeq:XP_722105.1 ProteinModelPortal:Q5AJY4 SMR:Q5AJY4
STRING:Q5AJY4 GeneID:3636342 GeneID:3636424 KEGG:cal:CaO19.11519
KEGG:cal:CaO19.4036 Uniprot:Q5AJY4
Length = 438
Score = 123 (48.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 36/126 (28%), Positives = 62/126 (49%)
Query: 13 GKILVSRQFV-DMSRIRIEG---LLAAFPKLVGTGKQHTYVETENVRYVYQPIEALYLLL 68
GK L+SR + D+S IE LL V G+ ++ E + Y++ LY+
Sbjct: 12 GKPLLSRDYKGDISSTTIEKFPLLLLELENTVDDGEYKPFINHEGINYIFINHNNLYICA 71
Query: 69 VTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEVISLGHKENVTV 127
+T K NI+ + L L +++ +Y SL+EE I K F +++ DE++ G +
Sbjct: 72 LTRKNENIMTIIIFLSKLVEVMTQYFKSLEEESI-KDNFVIIYELLDEMMDFGVPQTTDT 130
Query: 128 AQVKQY 133
+K+Y
Sbjct: 131 KILKEY 136
Score = 77 (32.2 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 35/150 (23%), Positives = 57/150 (38%)
Query: 345 KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLT-INCWPSV---SGNE 400
K H + F +E ++ P+ F +R+ S+ M PL +NC V S E
Sbjct: 246 KFHQCVRLSKFENEKLITFIPPDGEFTLMS-YRLSSSQFLMKPLILVNCKTKVHKHSRIE 304
Query: 401 TYVSIEYEASTMFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDNSN 460
+++ + NV + +P+P + P G ++ S L W +
Sbjct: 305 IVCTVKAQIKKKSTANNVEVVIPIPEDADTPKFSPEYGSVKWIPEKSCLIWKLKTFPGGK 364
Query: 461 R-SGSMEFVVPPA-DSSSFF---PISVRFS 485
+ S E +P D S PI V FS
Sbjct: 365 QFSMRAELGLPAVTDPESIMSKKPIKVNFS 394
Score = 53 (23.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/116 (24%), Positives = 47/116 (40%)
Query: 293 LTVEEKINVSLKRDGGMSNFDVQGTLSLQ--ILNQED---GLIQVQIETGGNPGIL---- 343
L V E IN+ + +G + N ++ G + ++ + D GL I TG N
Sbjct: 179 LDVIESINMLITANGQVLNSEILGEIKIKSHLSGMPDLRLGLNDKGIFTGNNDATTDSGK 238
Query: 344 ------FKTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLT-INC 392
K H + F +E ++ P+ F +R+ S+ M PL +NC
Sbjct: 239 NIEMEDIKFHQCVRLSKFENEKLITFIPPDGEFTLMS-YRLSSSQFLMKPLILVNC 293
>UNIPROTKB|Q5AJY4 [details] [associations]
symbol:APM1 "Potential clathrin-associated protein AP-1
complex component" species:237561 "Candida albicans SC5314"
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0071216 "cellular response to
biotic stimulus" evidence=IMP] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 CGD:CAL0004774 GO:GO:0006886
GO:GO:0071216 GO:GO:0036180 GO:GO:0016192 GO:GO:0009267
GO:GO:0036170 GO:GO:0030131 eggNOG:NOG315786 HOGENOM:HOG000173247
KO:K12393 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 EMBL:AACQ01000012 EMBL:AACQ01000011
RefSeq:XP_721944.1 RefSeq:XP_722105.1 ProteinModelPortal:Q5AJY4
SMR:Q5AJY4 STRING:Q5AJY4 GeneID:3636342 GeneID:3636424
KEGG:cal:CaO19.11519 KEGG:cal:CaO19.4036 Uniprot:Q5AJY4
Length = 438
Score = 123 (48.4 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 36/126 (28%), Positives = 62/126 (49%)
Query: 13 GKILVSRQFV-DMSRIRIEG---LLAAFPKLVGTGKQHTYVETENVRYVYQPIEALYLLL 68
GK L+SR + D+S IE LL V G+ ++ E + Y++ LY+
Sbjct: 12 GKPLLSRDYKGDISSTTIEKFPLLLLELENTVDDGEYKPFINHEGINYIFINHNNLYICA 71
Query: 69 VTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEVISLGHKENVTV 127
+T K NI+ + L L +++ +Y SL+EE I K F +++ DE++ G +
Sbjct: 72 LTRKNENIMTIIIFLSKLVEVMTQYFKSLEEESI-KDNFVIIYELLDEMMDFGVPQTTDT 130
Query: 128 AQVKQY 133
+K+Y
Sbjct: 131 KILKEY 136
Score = 77 (32.2 bits), Expect = 5.6e-08, Sum P(2) = 5.6e-08
Identities = 35/150 (23%), Positives = 57/150 (38%)
Query: 345 KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLT-INCWPSV---SGNE 400
K H + F +E ++ P+ F +R+ S+ M PL +NC V S E
Sbjct: 246 KFHQCVRLSKFENEKLITFIPPDGEFTLMS-YRLSSSQFLMKPLILVNCKTKVHKHSRIE 304
Query: 401 TYVSIEYEASTMFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDNSN 460
+++ + NV + +P+P + P G ++ S L W +
Sbjct: 305 IVCTVKAQIKKKSTANNVEVVIPIPEDADTPKFSPEYGSVKWIPEKSCLIWKLKTFPGGK 364
Query: 461 R-SGSMEFVVPPA-DSSSFF---PISVRFS 485
+ S E +P D S PI V FS
Sbjct: 365 QFSMRAELGLPAVTDPESIMSKKPIKVNFS 394
Score = 53 (23.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 28/116 (24%), Positives = 47/116 (40%)
Query: 293 LTVEEKINVSLKRDGGMSNFDVQGTLSLQ--ILNQED---GLIQVQIETGGNPGIL---- 343
L V E IN+ + +G + N ++ G + ++ + D GL I TG N
Sbjct: 179 LDVIESINMLITANGQVLNSEILGEIKIKSHLSGMPDLRLGLNDKGIFTGNNDATTDSGK 238
Query: 344 ------FKTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLT-INC 392
K H + F +E ++ P+ F +R+ S+ M PL +NC
Sbjct: 239 NIEMEDIKFHQCVRLSKFENEKLITFIPPDGEFTLMS-YRLSSSQFLMKPLILVNC 293
>FB|FBgn0024833 [details] [associations]
symbol:AP-1mu "Adaptor Protein complex 1, mu subunit"
species:7227 "Drosophila melanogaster" [GO:0030135 "coated vesicle"
evidence=TAS] [GO:0016183 "synaptic vesicle coating" evidence=TAS]
[GO:0008021 "synaptic vesicle" evidence=TAS] [GO:0006901 "vesicle
coating" evidence=TAS] [GO:0007269 "neurotransmitter secretion"
evidence=NAS] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030136 "clathrin-coated vesicle" evidence=IDA] [GO:0045746
"negative regulation of Notch signaling pathway" evidence=IGI]
[GO:2001136 "negative regulation of endocytic recycling"
evidence=IMP] [GO:0033363 "secretory granule organization"
evidence=IMP] [GO:0035976 "AP1 complex" evidence=IMP;IPI]
[GO:0048749 "compound eye development" evidence=IMP] [GO:0046907
"intracellular transport" evidence=IMP] [GO:0008565 "protein
transporter activity" evidence=IMP] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 EMBL:AE014297 GO:GO:0006886
GO:GO:0008565 GO:GO:0008021 GO:GO:0046907 GO:GO:0007269
GO:GO:0030131 eggNOG:NOG315786 GeneTree:ENSGT00530000062779
KO:K12393 OMA:IVGSVKM InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0016183 GO:GO:0033363
GO:GO:0048749 GO:GO:0045746 HSSP:Q96CW1 EMBL:AF110231 EMBL:AY058621
EMBL:AJ006219 RefSeq:NP_649906.1 UniGene:Dm.1125 SMR:O62531
STRING:O62531 EnsemblMetazoa:FBtr0082114 GeneID:41150
KEGG:dme:Dmel_CG9388 UCSC:CG9388-RA CTD:41150 FlyBase:FBgn0024833
InParanoid:O62531 OrthoDB:EOG4FFBH5 GenomeRNAi:41150 NextBio:822422
GO:GO:0035976 GO:GO:2001136 Uniprot:O62531
Length = 426
Score = 107 (42.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 39/178 (21%), Positives = 81/178 (45%)
Query: 5 AASIVSKSGKILVSRQF----VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYVYQP 60
A ++ GK+L+SR + +DM+ I + + + G ++T + Y
Sbjct: 5 AIFVLDVKGKVLISRNYRGDNIDMAVI--DKFMPLLMEREEEGLITPILQTAETTFAYIK 62
Query: 61 IEALYLLLVT--NKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEVI 117
LY++ T NK NI L ++++ EY L+EE I + F +++ DE++
Sbjct: 63 TNNLYIVSTTPRNKNVNIALVFVFLHKIAQVFVEYFKELEEESI-RDNFVIIYELLDELL 121
Query: 118 SLGHKENVTVAQVKQYCEMESHEEKLHKLV---VQSKINETKDVMKRKASEIDKSKIE 172
G+ + +++Y E H+ +L + V + ++ + +K + +E+ IE
Sbjct: 122 DFGYPQTTDSKILQEYITQEGHKLELQPRIPVAVTNAVSWRSEGIKYRKNEVFLDVIE 179
Score = 76 (31.8 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 49/240 (20%), Positives = 93/240 (38%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQI---------LNQEDGLIQVQIETGGNPG 341
+ L V E +N+ +G + ++ G + +++ L D ++ G +
Sbjct: 173 VFLDVIESVNLLANANGNVLRSEIVGAIKMRVYLSGMPELRLGLNDKVLFESTGRGKSKS 232
Query: 342 ILF---KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCW-PSVS 397
+ K H + F ++ + P+ F + +R+ + + PL W SV
Sbjct: 233 VELEDVKFHQCVRLSRFENDRTISFIPPDGEF-ELMSYRLNT---HVKPLI---WIESVI 285
Query: 398 GNETYVSIEY--EASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEW 451
+ +EY +A + F R NV I +P+PA ++P + G +Y + + W
Sbjct: 286 ERHAHSRVEYMIKAKSQFKRRSTANNVEIVIPVPADADSPKFKTTIGSCKYAPEQNAIIW 345
Query: 452 TILLIDNSNRS-GSMEFVVPPADSSSFF----PISVRFSA---TSTYSDLKVVNIIPLRG 503
TI F +P +S PI VRF T++ ++ + II G
Sbjct: 346 TIKSFPGGKEYLMRAHFGLPSVESEDNTEGKPPIQVRFEIPYFTTSGIQVRYLKIIEKSG 405
>POMBASE|SPBP16F5.07 [details] [associations]
symbol:apm1 "AP-1 adaptor complex mu subunit Apm1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0016192 "vesicle-mediated
transport" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0030121 "AP-1 adaptor complex" evidence=IDA]
[GO:0030276 "clathrin binding" evidence=ISS] [GO:0032153 "cell
division site" evidence=IDA] [GO:0032889 "regulation of vacuole
fusion, non-autophagic" evidence=IMP] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] [GO:0051286 "cell tip" evidence=IDA]
[GO:0060237 "regulation of fungal-type cell wall organization"
evidence=IMP] [GO:0071775 "regulation of cell cycle cytokinesis"
evidence=IMP] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990 PROSITE:PS00991
PROSITE:PS51072 PomBase:SPBP16F5.07 GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 GO:GO:0016192 GO:GO:0071775 GO:GO:0032153
GO:GO:0044732 GO:GO:0051286 GO:GO:0005768 EMBL:CU329671
GO:GO:0005905 GenomeReviews:CU329671_GR GO:GO:0016197 GO:GO:0030121
GO:GO:0030276 eggNOG:NOG315786 HOGENOM:HOG000173247 KO:K12393
OMA:IVGSVKM InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 RefSeq:NP_595781.1 ProteinModelPortal:Q9HFE5
SMR:Q9HFE5 IntAct:Q9HFE5 STRING:Q9HFE5 EnsemblFungi:SPBP16F5.07.1
GeneID:2541306 KEGG:spo:SPBP16F5.07 OrthoDB:EOG4NCQMT
NextBio:20802416 GO:GO:0060237 GO:GO:0032889 Uniprot:Q9HFE5
Length = 426
Score = 111 (44.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 34/143 (23%), Positives = 67/143 (46%)
Query: 5 AASIVSKSGKILVSRQF-VDMSRIRIEGLLAAFPKLVGT-GKQHTYVETENVRYVYQPIE 62
A +++ GK+++SR + D+ +E L ++ G + E + Y+Y
Sbjct: 4 AIFVLNLKGKVIISRDYRADIPMSVVEKFLPLKSEVEEEQGFSTPCLTHEGINYIYIHHN 63
Query: 63 ALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEVISLGH 121
+YLL ++ S+ +E L LR ++ + +Y L EE I + F L++ DE++ G
Sbjct: 64 DVYLLALSKMNSDAMEMLVFLRKMADVFIDYFKELQEESI-RDNFVLVYELLDEIMDFGF 122
Query: 122 KENVTVAQVKQYCEMESHEEKLH 144
+ +++Y S+ K H
Sbjct: 123 PQTTETKILQEYITQTSNTVKKH 145
Score = 63 (27.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 25/114 (21%), Positives = 48/114 (42%)
Query: 345 KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLT-INCWPSVSGNETYV 403
K H + F ++ + P+ F +RM S ++ PL + C S+ + + +
Sbjct: 237 KFHQCVRLARFENDRTISFIPPDGEFDLMS-YRMSS---NVRPLIWVEC-ESIVHSGSRI 291
Query: 404 SIEYEASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTI 453
+A F R NV I +P+P ++P + +G +Y + + W I
Sbjct: 292 EFMVKAKAQFKKRCIANNVQIIIPVPEDADSPRFQTSNGHVQYAPEQAAMVWNI 345
>UNIPROTKB|O00189 [details] [associations]
symbol:AP4M1 "AP-4 complex subunit mu-1" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0000138 "Golgi trans
cisterna" evidence=TAS] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0030119 "AP-type membrane coat adaptor complex"
evidence=TAS] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990 PROSITE:PS00991
PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192 GO:GO:0005905 PDB:3L81
PDBsum:3L81 GO:GO:0005215 EMBL:CH471091 GO:GO:0000138 GO:GO:0030131
GO:GO:0030119 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 Orphanet:280763 CTD:9179 eggNOG:NOG281769
HOGENOM:HOG000173245 HOVERGEN:HBG102734 KO:K12402 EMBL:Y08387
EMBL:AF155158 EMBL:AF020796 EMBL:BC018705 IPI:IPI00103040
RefSeq:NP_004713.2 UniGene:Hs.632317 ProteinModelPortal:O00189
SMR:O00189 IntAct:O00189 STRING:O00189 PhosphoSite:O00189
PRIDE:O00189 DNASU:9179 Ensembl:ENST00000359593
Ensembl:ENST00000421755 GeneID:9179 KEGG:hsa:9179 UCSC:uc003utb.4
GeneCards:GC07P099699 HGNC:HGNC:574 MIM:602296 MIM:612936
neXtProt:NX_O00189 PharmGKB:PA24866 InParanoid:O00189
PhylomeDB:O00189 ChiTaRS:AP4M1 EvolutionaryTrace:O00189
GenomeRNAi:9179 NextBio:34413 ArrayExpress:O00189 Bgee:O00189
CleanEx:HS_AP4M1 Genevestigator:O00189 GermOnline:ENSG00000206580
Uniprot:O00189
Length = 453
Score = 89 (36.4 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 44/182 (24%), Positives = 75/182 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQIL-----NQEDGLIQV----QIETGG-NP 340
+ L V E+++V + +G + DVQG + L+ GL + + E G P
Sbjct: 187 VFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVGKSELRGYGP 246
Query: 341 GILFKT---HPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCWPSV- 396
GI H ++N + F IL L+ P + + R Q +D+ PL +PSV
Sbjct: 247 GIRVDEVSFHSSVNLDEFESHRILRLQPPQG---ELTVMRYQLSDDLPSPLPFRLFPSVQ 303
Query: 397 ----SGN-ETYVSIEYEASTMFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEW 451
SG + Y+ + + + NV + +PLP + S E + + L W
Sbjct: 304 WDRGSGRLQVYLKLRCDLLSKSQALNVRLHLPLPRGVVSLSQELSSPEQKAELAEGALRW 363
Query: 452 TI 453
+
Sbjct: 364 DL 365
Score = 87 (35.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 36/147 (24%), Positives = 65/147 (44%)
Query: 8 IVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGT-GKQHTYVETENVR-YVYQPIEALY 65
I+S G L+ + F S R L + KL G G + V + R +++ LY
Sbjct: 7 ILSSKGDPLIYKDFRGDSGGRDVAELF-YRKLTGLPGDESPVVMHHHGRHFIHIRHSGLY 65
Query: 66 LLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLGHKENV 125
L++ T++ + LE L L+ L+ +Y SL E I + + DEV+ G+ +
Sbjct: 66 LVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQTT 125
Query: 126 TVAQVKQYCEMESHEEKLHKLVVQSKI 152
+ ++ + + E+ K L S +
Sbjct: 126 STEMLRNFIQTEAVVSKPFSLFDLSSV 152
>RGD|1310233 [details] [associations]
symbol:Ap4m1 "adaptor-related protein complex 4, mu 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005905 "coated pit" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 RGD:1310233 GO:GO:0005794
GO:GO:0006886 GO:GO:0016192 GO:GO:0005905 GO:GO:0030131
GeneTree:ENSGT00530000062779 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 CTD:9179 eggNOG:NOG281769
HOGENOM:HOG000173245 HOVERGEN:HBG102734 KO:K12402 OMA:GLQIRFL
OrthoDB:EOG4RJG1M EMBL:DQ298439 IPI:IPI00370600
RefSeq:NP_001033066.1 UniGene:Rn.154558 ProteinModelPortal:Q2PWT8
STRING:Q2PWT8 Ensembl:ENSRNOT00000001827 GeneID:304344
KEGG:rno:304344 UCSC:RGD:1310233 InParanoid:Q2PWT8 NextBio:652924
Genevestigator:Q2PWT8 Uniprot:Q2PWT8
Length = 453
Score = 88 (36.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 34/147 (23%), Positives = 65/147 (44%)
Query: 8 IVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGT--GKQHTYVETENVRYVYQPIEALY 65
I+S G L+ + F S R L + KL G G+ + ++ +++ LY
Sbjct: 7 ILSSKGDPLIYKDFRGDSGGRDVAELF-YRKLTGLPGGESPVVMYHDDRHFIHIRHSGLY 65
Query: 66 LLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLGHKENV 125
L+ T++ + LE L L+ L+ +Y SL+E I + + DEV+ G+ +
Sbjct: 66 LVATTSENVSPFSLLELLSRLATLLGDYCGSLNEGTISRNVALVYELLDEVLDYGYVQTT 125
Query: 126 TVAQVKQYCEMESHEEKLHKLVVQSKI 152
+ ++ + + E+ K L S +
Sbjct: 126 STDMLRNFIQTEAAVSKPFSLFDLSSV 152
Score = 85 (35.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 40/154 (25%), Positives = 67/154 (43%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQ-ILNQED----GLIQV----QIETGG-NP 340
+ L V E+++V + +G + DVQG + L+ L GL + + E G P
Sbjct: 187 VFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSSSEICIGLTEEFCVGKSELRGYGP 246
Query: 341 GILFKT---HPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCWPSV- 396
GI H ++N + F IL L+ P + + R Q +D+ PL +PSV
Sbjct: 247 GIRVDEVSFHSSVNLDEFESHRILHLQPPQG---ELTVMRYQLSDDLPSPLPFRLFPSVQ 303
Query: 397 ----SGN-ETYVSIEYEASTMFDLRNVVISVPLP 425
SG + Y+ + + N+ + +PLP
Sbjct: 304 WDQGSGRLQVYLKLRCDLPPKSQALNIHLHLPLP 337
>UNIPROTKB|E2RED8 [details] [associations]
symbol:AP4M1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00991 PROSITE:PS51072
GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
GeneTree:ENSGT00530000062779 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 CTD:9179 KO:K12402 OMA:GLQIRFL
EMBL:AAEX03004275 RefSeq:XP_546965.2 Ensembl:ENSCAFT00000023359
GeneID:489847 KEGG:cfa:489847 Uniprot:E2RED8
Length = 452
Score = 87 (35.7 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 36/147 (24%), Positives = 65/147 (44%)
Query: 8 IVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGT-GKQHTYVETENVR-YVYQPIEALY 65
I+S G L+ + F S R L + KL G G + V + R +++ LY
Sbjct: 7 ILSSKGDPLIYKDFRGDSGGRDVAELF-YRKLTGLPGDESPVVMHHDDRHFIHIRHSGLY 65
Query: 66 LLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLGHKENV 125
L+ T++ + LE L L+ L+ +Y SL E I + + DEV+ G+ +
Sbjct: 66 LVATTSENISPFSLLELLSRLATLLGDYCGSLSEGTISRNVALVYELLDEVLDYGYVQTT 125
Query: 126 TVAQVKQYCEMESHEEKLHKLVVQSKI 152
++ ++ + + E+ K L S +
Sbjct: 126 SMEMLRNFIQTEAVVSKPFSLFDLSSV 152
Score = 86 (35.3 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 47/184 (25%), Positives = 77/184 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQIL-----NQEDGLIQV----QIETGG-NP 340
+ L V E+++V + +G + DVQG + L+ GL + + E G P
Sbjct: 187 VFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVGKSELRGYGP 246
Query: 341 GILFKT---HPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCWPSV- 396
GI H ++ E F IL L+ P + + R Q +D+ PL +PSV
Sbjct: 247 GIRVDEVSFHSSVLLEEFESHRILRLQPPQG---ELTVMRYQLSDDLPSPLPFRLFPSVQ 303
Query: 397 ----SGN-ETYVSIEYEASTMFDLRNVVISVPLPALREAPSVRQ-IDG-EWRYDSRNSVL 449
SG + Y+ + + NV + +PLP R S+ Q + G E + + L
Sbjct: 304 WDRGSGRLQVYLKLRCDLPPKSQALNVRLHLPLP--RGVVSLSQELSGPEQKAELGEGAL 361
Query: 450 EWTI 453
W +
Sbjct: 362 RWDL 365
>ASPGD|ASPL0000077433 [details] [associations]
symbol:AN8795 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0060237 "regulation of
fungal-type cell wall organization" evidence=IEA] [GO:0032889
"regulation of vacuole fusion, non-autophagic" evidence=IEA]
[GO:0071775 "regulation of cell cycle cytokinesis" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0051286 "cell tip" evidence=IEA]
[GO:0044732 "mitotic spindle pole body" evidence=IEA] [GO:0032153
"cell division site" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0030121 "AP-1
adaptor complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990 PROSITE:PS00991
PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192 EMBL:BN001303
GO:GO:0030131 HOGENOM:HOG000173247 OMA:IVGSVKM InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
EnsemblFungi:CADANIAT00006267 Uniprot:C8V9P3
Length = 446
Score = 112 (44.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 40/154 (25%), Positives = 72/154 (46%)
Query: 5 AASIVSKSGKILVSRQFV-DMSRIRIEGLLAAFPKLVGTGKQHTYV-----ETENVRYVY 58
A + GK L++R + D+ +E FP L+ ++ + E + Y+Y
Sbjct: 4 AVFFLDLKGKTLLARNYRGDIPMSAVE----KFPILLSDAEEESSAVPPCFSHEGINYLY 59
Query: 59 QPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEVI 117
LY+L +T K +N E L L + ++ EY L+EE I + F +++ DE++
Sbjct: 60 IRHSNLYILALTKKNTNATEILLFLHKIVEVFTEYFKVLEEESI-RDNFVIIYELLDEMM 118
Query: 118 SLGHKENVTVAQVKQYCEMESHEEKLHKLVVQSK 151
G+ + +++Y ESH KL VQ++
Sbjct: 119 DFGYPQTTESKILQEYITQESH-----KLEVQAR 147
Score = 59 (25.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 29/116 (25%), Positives = 48/116 (41%)
Query: 345 KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCW-PSVSGNETYV 403
K H + F ++ + P+ F + +R+ + + ++ + C S SG+
Sbjct: 237 KFHQCVRLSRFENDRTISFIPPDGEF-ELMSYRLNTQVKPLI--WVECLVESHSGSR--- 290
Query: 404 SIEY--EASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTI 453
IEY +A F R NV I VP+P ++P R G Y S + W I
Sbjct: 291 -IEYMLKAKAQFKRRSTANNVEILVPVPDDADSPRFRTNIGTVHYAPEKSAIVWKI 345
>UNIPROTKB|F1NZQ2 [details] [associations]
symbol:AP1M1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0032438 "melanosome
organization" evidence=IEA] [GO:0035646 "endosome to melanosome
transport" evidence=IEA] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990 PROSITE:PS00991
PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
GeneTree:ENSGT00530000062779 OMA:IVGSVKM GO:GO:0035646
GO:GO:0032438 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 EMBL:AADN02062001 IPI:IPI00573874
Ensembl:ENSGALT00000006310 ArrayExpress:F1NZQ2 Uniprot:F1NZQ2
Length = 416
Score = 96 (38.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 1 MVVLAASIVSKSGKILVSRQF---VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYV 57
M A ++ GK+L+ R + VDMS + E + + G + VR++
Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEV--EHFMPILMEKEEEGTLSPILAHGGVRFM 58
Query: 58 YQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEV 116
+ LYL+ + K + + L + ++ EY L+EE I + F +++ DE+
Sbjct: 59 WIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESI-RDNFVIIYELLDEL 117
Query: 117 ISLGHKENVTVAQVKQYCEMESHE 140
+ G+ + +++Y E H+
Sbjct: 118 MDFGYPQTTDSKILQEYITQEGHK 141
Score = 73 (30.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 51/243 (20%), Positives = 100/243 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILF------ 344
+ L V E +N+ + +G + ++ G++ +++ G+ ++++ G N +LF
Sbjct: 171 VFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLS--GMPELRL--GLNDKVLFDNTGRG 226
Query: 345 ----------KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCW- 393
K H + F ++ + P+ F + +R+ + + PL W
Sbjct: 227 KSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEF-ELMSYRLNT---HVKPLI---WI 279
Query: 394 PSVSGNETYVSIEY--EASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNS 447
SV ++ IEY +A + F R NV I +P+P ++P + G ++ NS
Sbjct: 280 ESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENS 339
Query: 448 VLEWTILLIDNSNRS-GSMEFVVPPA---DSSSFFPISVRFSA---TSTYSDLKVVNIIP 500
+ W+I F +P D PISV+F T++ ++ + II
Sbjct: 340 EIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIE 399
Query: 501 LRG 503
G
Sbjct: 400 KSG 402
>UNIPROTKB|Q2KJ81 [details] [associations]
symbol:AP1M1 "AP-1 complex subunit mu-1" species:9913 "Bos
taurus" [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0035646 "endosome to melanosome transport" evidence=IEA]
[GO:0032438 "melanosome organization" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 GO:GO:0005794 GO:GO:0006886
GO:GO:0016192 GO:GO:0030131 GO:GO:0030665 EMBL:BC105477
IPI:IPI00714239 RefSeq:NP_001039349.2 UniGene:Bt.23352
ProteinModelPortal:Q2KJ81 SMR:Q2KJ81 STRING:Q2KJ81 PRIDE:Q2KJ81
Ensembl:ENSBTAT00000017724 GeneID:504310 KEGG:bta:504310 CTD:8907
eggNOG:NOG315786 GeneTree:ENSGT00530000062779 HOGENOM:HOG000173247
HOVERGEN:HBG050516 InParanoid:Q2KJ81 KO:K12393 OMA:IVGSVKM
OrthoDB:EOG4CJVH3 NextBio:20866604 GO:GO:0035646 GO:GO:0032438
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
Uniprot:Q2KJ81
Length = 423
Score = 96 (38.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 1 MVVLAASIVSKSGKILVSRQF---VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYV 57
M A ++ GK+L+ R + VDMS + E + + G + VR++
Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEV--EHFMPILMEKEEEGMLSPILAHGGVRFM 58
Query: 58 YQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEV 116
+ LYL+ + K + + L + ++ EY L+EE I + F +++ DE+
Sbjct: 59 WIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESI-RDNFVIIYELLDEL 117
Query: 117 ISLGHKENVTVAQVKQYCEMESHE 140
+ G+ + +++Y E H+
Sbjct: 118 MDFGYPQTTDSKILQEYITQEGHK 141
Score = 73 (30.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 51/243 (20%), Positives = 100/243 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILF------ 344
+ L V E +N+ + +G + ++ G++ +++ G+ ++++ G N +LF
Sbjct: 171 VFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLS--GMPELRL--GLNDKVLFDNTGRG 226
Query: 345 ----------KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCW- 393
K H + F ++ + P+ F + +R+ + + PL W
Sbjct: 227 KSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEF-ELMSYRLNT---HVKPLI---WI 279
Query: 394 PSVSGNETYVSIEY--EASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNS 447
SV ++ IEY +A + F R NV I +P+P ++P + G ++ NS
Sbjct: 280 ESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENS 339
Query: 448 VLEWTILLIDNSNRS-GSMEFVVPPA---DSSSFFPISVRFSA---TSTYSDLKVVNIIP 500
+ W+I F +P D PISV+F T++ ++ + II
Sbjct: 340 EIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIE 399
Query: 501 LRG 503
G
Sbjct: 400 KSG 402
>UNIPROTKB|J9P1I0 [details] [associations]
symbol:AP1M1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990 PROSITE:PS00991
PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131 CTD:8907
GeneTree:ENSGT00530000062779 KO:K12393 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:AAEX03012309
RefSeq:XP_852486.1 ProteinModelPortal:J9P1I0
Ensembl:ENSCAFT00000047522 GeneID:609840 KEGG:cfa:609840
Uniprot:J9P1I0
Length = 423
Score = 96 (38.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 1 MVVLAASIVSKSGKILVSRQF---VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYV 57
M A ++ GK+L+ R + VDMS + E + + G + VR++
Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEV--EHFMPILMEKEEEGMLSPILAHGGVRFM 58
Query: 58 YQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEV 116
+ LYL+ + K + + L + ++ EY L+EE I + F +++ DE+
Sbjct: 59 WIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESI-RDNFVIIYELLDEL 117
Query: 117 ISLGHKENVTVAQVKQYCEMESHE 140
+ G+ + +++Y E H+
Sbjct: 118 MDFGYPQTTDSKILQEYITQEGHK 141
Score = 73 (30.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 51/243 (20%), Positives = 100/243 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILF------ 344
+ L V E +N+ + +G + ++ G++ +++ G+ ++++ G N +LF
Sbjct: 171 VFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLS--GMPELRL--GLNDKVLFDNTGRG 226
Query: 345 ----------KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCW- 393
K H + F ++ + P+ F + +R+ + + PL W
Sbjct: 227 KSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEF-ELMSYRLNT---HVKPLI---WI 279
Query: 394 PSVSGNETYVSIEY--EASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNS 447
SV ++ IEY +A + F R NV I +P+P ++P + G ++ NS
Sbjct: 280 ESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENS 339
Query: 448 VLEWTILLIDNSNRS-GSMEFVVPPA---DSSSFFPISVRFSA---TSTYSDLKVVNIIP 500
+ W+I F +P D PISV+F T++ ++ + II
Sbjct: 340 EIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIE 399
Query: 501 LRG 503
G
Sbjct: 400 KSG 402
>UNIPROTKB|Q9BXS5 [details] [associations]
symbol:AP1M1 "AP-1 complex subunit mu-1" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0032438 "melanosome
organization" evidence=IMP] [GO:0035646 "endosome to melanosome
transport" evidence=IMP] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006892 "post-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=TAS]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=TAS]
[GO:0032588 "trans-Golgi network membrane" evidence=TAS]
[GO:0050690 "regulation of defense response to virus by virus"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0006886 GO:GO:0000139
GO:GO:0050690 GO:GO:0016032 GO:GO:0005765 GO:GO:0032588
GO:GO:0019886 GO:GO:0030659 GO:GO:0030131 GO:GO:0030665
GO:GO:0016044 GO:GO:0006892 CTD:8907 eggNOG:NOG315786
HOGENOM:HOG000173247 HOVERGEN:HBG050516 KO:K12393 OMA:IVGSVKM
OrthoDB:EOG4CJVH3 GO:GO:0035646 GO:GO:0032438 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:AF290613
EMBL:DQ059565 EMBL:AC020911 EMBL:BC017469 IPI:IPI00032516
IPI:IPI00910088 RefSeq:NP_001123996.1 RefSeq:NP_115882.1
UniGene:Hs.71040 ProteinModelPortal:Q9BXS5 SMR:Q9BXS5 IntAct:Q9BXS5
MINT:MINT-1456291 STRING:Q9BXS5 PhosphoSite:Q9BXS5 DMDM:18202738
PaxDb:Q9BXS5 PeptideAtlas:Q9BXS5 PRIDE:Q9BXS5
Ensembl:ENST00000291439 Ensembl:ENST00000444449 GeneID:8907
KEGG:hsa:8907 UCSC:uc002ndu.2 GeneCards:GC19P016308 HGNC:HGNC:13667
HPA:HPA045256 MIM:603535 neXtProt:NX_Q9BXS5 PharmGKB:PA24848
InParanoid:Q9BXS5 PhylomeDB:Q9BXS5 GenomeRNAi:8907 NextBio:33467
ArrayExpress:Q9BXS5 Bgee:Q9BXS5 CleanEx:HS_AP1M1
Genevestigator:Q9BXS5 GermOnline:ENSG00000072958 Uniprot:Q9BXS5
Length = 423
Score = 96 (38.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 1 MVVLAASIVSKSGKILVSRQF---VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYV 57
M A ++ GK+L+ R + VDMS + E + + G + VR++
Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEV--EHFMPILMEKEEEGMLSPILAHGGVRFM 58
Query: 58 YQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEV 116
+ LYL+ + K + + L + ++ EY L+EE I + F +++ DE+
Sbjct: 59 WIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESI-RDNFVIIYELLDEL 117
Query: 117 ISLGHKENVTVAQVKQYCEMESHE 140
+ G+ + +++Y E H+
Sbjct: 118 MDFGYPQTTDSKILQEYITQEGHK 141
Score = 73 (30.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 51/243 (20%), Positives = 100/243 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILF------ 344
+ L V E +N+ + +G + ++ G++ +++ G+ ++++ G N +LF
Sbjct: 171 VFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLS--GMPELRL--GLNDKVLFDNTGRG 226
Query: 345 ----------KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCW- 393
K H + F ++ + P+ F + +R+ + + PL W
Sbjct: 227 KSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEF-ELMSYRLNT---HVKPLI---WI 279
Query: 394 PSVSGNETYVSIEY--EASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNS 447
SV ++ IEY +A + F R NV I +P+P ++P + G ++ NS
Sbjct: 280 ESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENS 339
Query: 448 VLEWTILLIDNSNRS-GSMEFVVPPA---DSSSFFPISVRFSA---TSTYSDLKVVNIIP 500
+ W+I F +P D PISV+F T++ ++ + II
Sbjct: 340 EIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIE 399
Query: 501 LRG 503
G
Sbjct: 400 KSG 402
>UNIPROTKB|F2Z5I7 [details] [associations]
symbol:AP1M1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035646 "endosome to melanosome transport"
evidence=IEA] [GO:0032438 "melanosome organization" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 GeneTree:ENSGT00530000062779 OMA:IVGSVKM
GO:GO:0035646 GO:GO:0032438 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:CU463900
ProteinModelPortal:F2Z5I7 SMR:F2Z5I7 PRIDE:F2Z5I7
Ensembl:ENSSSCT00000015135 Uniprot:F2Z5I7
Length = 423
Score = 96 (38.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 1 MVVLAASIVSKSGKILVSRQF---VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYV 57
M A ++ GK+L+ R + VDMS + E + + G + VR++
Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEV--EHFMPILMEKEEEGMLSPILAHGGVRFM 58
Query: 58 YQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEV 116
+ LYL+ + K + + L + ++ EY L+EE I + F +++ DE+
Sbjct: 59 WIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESI-RDNFVIIYELLDEL 117
Query: 117 ISLGHKENVTVAQVKQYCEMESHE 140
+ G+ + +++Y E H+
Sbjct: 118 MDFGYPQTTDSKILQEYITQEGHK 141
Score = 73 (30.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 51/243 (20%), Positives = 100/243 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILF------ 344
+ L V E +N+ + +G + ++ G++ +++ G+ ++++ G N +LF
Sbjct: 171 VFLDVIESVNLLVSANGNVLRSEIVGSIKMRVFLS--GMPELRL--GLNDKVLFDNTGRG 226
Query: 345 ----------KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCW- 393
K H + F ++ + P+ F + +R+ + + PL W
Sbjct: 227 KSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEF-ELMSYRLNT---HVKPLI---WI 279
Query: 394 PSVSGNETYVSIEY--EASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNS 447
SV ++ IEY +A + F R NV I +P+P ++P + G ++ NS
Sbjct: 280 ESVIEKHSHSRIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENS 339
Query: 448 VLEWTILLIDNSNRS-GSMEFVVPPA---DSSSFFPISVRFSA---TSTYSDLKVVNIIP 500
+ W+I F +P D PISV+F T++ ++ + II
Sbjct: 340 EIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIE 399
Query: 501 LRG 503
G
Sbjct: 400 KSG 402
>RGD|1307653 [details] [associations]
symbol:Ap1m1 "adaptor-related protein complex 1, mu 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030665 "clathrin-coated vesicle membrane" evidence=IEA]
[GO:0032438 "melanosome organization" evidence=IEA;ISO] [GO:0035646
"endosome to melanosome transport" evidence=IEA;ISO]
InterPro:IPR001392 InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR018240 Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314
PROSITE:PS00990 PROSITE:PS00991 PROSITE:PS51072 RGD:1307653
GO:GO:0005794 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
GO:GO:0030665 CTD:8907 eggNOG:NOG315786
GeneTree:ENSGT00530000062779 HOGENOM:HOG000173247
HOVERGEN:HBG050516 KO:K12393 OrthoDB:EOG4CJVH3 GO:GO:0035646
GO:GO:0032438 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 EMBL:BC107903 IPI:IPI00568223 RefSeq:NP_001037704.1
UniGene:Rn.139185 ProteinModelPortal:Q32Q06 SMR:Q32Q06
STRING:Q32Q06 PRIDE:Q32Q06 Ensembl:ENSRNOT00000019350 GeneID:306332
KEGG:rno:306332 UCSC:RGD:1307653 NextBio:655867
Genevestigator:Q32Q06 GermOnline:ENSRNOG00000014454 Uniprot:Q32Q06
Length = 423
Score = 96 (38.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 1 MVVLAASIVSKSGKILVSRQF---VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYV 57
M A ++ GK+L+ R + VDMS + E + + G + VR++
Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEV--EHFMPILMEKEEEGMLSPILAHGGVRFM 58
Query: 58 YQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEV 116
+ LYL+ + K + + L + ++ EY L+EE I + F +++ DE+
Sbjct: 59 WIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESI-RDNFVIIYELLDEL 117
Query: 117 ISLGHKENVTVAQVKQYCEMESHE 140
+ G+ + +++Y E H+
Sbjct: 118 MDFGYPQTTDSKILQEYITQEGHK 141
Score = 72 (30.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 51/243 (20%), Positives = 100/243 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILF------ 344
+ L V E +N+ + +G + ++ G++ +++ G+ ++++ G N +LF
Sbjct: 171 VFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLS--GMPELRL--GLNDKVLFDNTGRG 226
Query: 345 ----------KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCW- 393
K H + F ++ + P+ F + +R+ + + PL W
Sbjct: 227 KSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEF-ELMSYRLNT---HVKPLI---WI 279
Query: 394 PSVSGNETYVSIEY--EASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNS 447
SV ++ IEY +A + F R NV I +P+P ++P + G ++ NS
Sbjct: 280 ESVIEKHSHSRIEYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENS 339
Query: 448 VLEWTILLIDNSNRS-GSMEFVVPPA---DSSSFFPISVRFSA---TSTYSDLKVVNIIP 500
+ W+I F +P D PISV+F T++ ++ + II
Sbjct: 340 EIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIE 399
Query: 501 LRG 503
G
Sbjct: 400 KSG 402
>DICTYBASE|DDB_G0289247 [details] [associations]
symbol:apm1 "clathrin-adaptor medium chain AP-1"
species:44689 "Dictyostelium discoideum" [GO:0030121 "AP-1 adaptor
complex" evidence=IDA] [GO:0008565 "protein transporter activity"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IMP] [GO:0007041 "lysosomal transport" evidence=IMP]
[GO:0007032 "endosome organization" evidence=IMP] [GO:0006971
"hypotonic response" evidence=IMP] [GO:0030130 "clathrin coat of
trans-Golgi network vesicle" evidence=ISS] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030665 "clathrin-coated vesicle membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 dictyBase:DDB_G0289247
GO:GO:0007275 GO:GO:0006886 GO:GO:0016192 GO:GO:0008565
GenomeReviews:CM000154_GR GO:GO:0030121 GO:GO:0007032
eggNOG:NOG315786 KO:K12393 OMA:IVGSVKM InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:AY007278
EMBL:AAFI02000132 RefSeq:XP_636252.1 HSSP:P84092
ProteinModelPortal:Q54HS9 SMR:Q54HS9 STRING:Q54HS9
EnsemblProtists:DDB0191102 GeneID:8627033 KEGG:ddi:DDB_G0289247
ProtClustDB:CLSZ2429129 GO:GO:0006971 GO:GO:0007041 Uniprot:Q54HS9
Length = 428
Score = 94 (38.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/143 (20%), Positives = 66/143 (46%)
Query: 1 MVVLAASIVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGTGKQHT--YVETENVRYVY 58
M A ++ GK+L+SR + + + + K++ + ++ + + Y+Y
Sbjct: 1 MAASAIFLMDSKGKVLISRNYRGDVPMSVASKFIS--KILEEEDLNLKPIIQEDGISYIY 58
Query: 59 QPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEVI 117
L+LL T + +N L L + ++ EY L+EE I + F +++ DE++
Sbjct: 59 VKHNNLFLLATTERNANAATILLFLYKMIEVFNEYFKELEEESI-RDNFVVIYELMDEMM 117
Query: 118 SLGHKENVTVAQVKQYCEMESHE 140
G+ ++ +++Y E ++
Sbjct: 118 DFGYPQSTEPKILQEYITQEGYK 140
Score = 74 (31.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 46/192 (23%), Positives = 77/192 (40%)
Query: 345 KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCWPSVSGNETYVS 404
K H + F ++ + P+ F + +R+ + + ++ + C +S +
Sbjct: 241 KFHQCVRLSKFENDRTISFIPPDGEF-ELMSYRLNTTVKPLI--WVEC---ISDTHAHSR 294
Query: 405 IEY--EASTMFD----LRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDN 458
+EY +A + F NV I VP+P + P R G +Y + WTI
Sbjct: 295 VEYMVKAKSQFKGKSIANNVEIIVPVPPDADTPKFRCTVGTCKYAPEKDAIIWTIKQFPG 354
Query: 459 SNRSGSME--FVVPP-ADSSSFF--PISVRFSATS-TYSDLKV--VNIIPLRG-GAPPKF 509
R M F +P +D PI V+F T S ++V + II G A P
Sbjct: 355 GGREFLMRAHFGLPSISDEKPATKPPIMVKFEIPYYTVSGIQVRYLKIIEKSGYQALPWV 414
Query: 510 SQRTVLITENYQ 521
R V ++ +YQ
Sbjct: 415 --RYVCLSGDYQ 424
>MGI|MGI:102776 [details] [associations]
symbol:Ap1m1 "adaptor-related protein complex AP-1, mu
subunit 1" species:10090 "Mus musculus" [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=TAS] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0032438
"melanosome organization" evidence=ISO] [GO:0035646 "endosome to
melanosome transport" evidence=ISO] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 MGI:MGI:102776 GO:GO:0005794
GO:GO:0006886 PDB:4EMZ PDB:4EN2 PDBsum:4EMZ PDBsum:4EN2
GO:GO:0016192 GO:GO:0005802 GO:GO:0030131 GO:GO:0030665 PDB:1W63
PDBsum:1W63 CTD:8907 eggNOG:NOG315786 HOGENOM:HOG000173247
HOVERGEN:HBG050516 KO:K12393 OMA:IVGSVKM OrthoDB:EOG4CJVH3
GO:GO:0035646 GO:GO:0032438 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:M62419 EMBL:AF139405
EMBL:AF139394 EMBL:AF139395 EMBL:AF139396 EMBL:AF139397
EMBL:AF139398 EMBL:AF139399 EMBL:AF139400 EMBL:AF139401
EMBL:AF139402 EMBL:AF139403 EMBL:AF139404 EMBL:BC003823
IPI:IPI00119680 PIR:S19693 RefSeq:NP_031482.1 UniGene:Mm.290086
ProteinModelPortal:P35585 SMR:P35585 DIP:DIP-35323N IntAct:P35585
STRING:P35585 PhosphoSite:P35585 PaxDb:P35585 PRIDE:P35585
Ensembl:ENSMUST00000003117 GeneID:11767 KEGG:mmu:11767
InParanoid:P35585 EvolutionaryTrace:P35585 NextBio:279533
Bgee:P35585 Genevestigator:P35585 GermOnline:ENSMUSG00000003033
Uniprot:P35585
Length = 423
Score = 96 (38.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 1 MVVLAASIVSKSGKILVSRQF---VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYV 57
M A ++ GK+L+ R + VDMS + E + + G + VR++
Sbjct: 1 MSASAVYVLDLKGKVLICRNYRGDVDMSEV--EHFMPILMEKEEEGMLSPILAHGGVRFM 58
Query: 58 YQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEV 116
+ LYL+ + K + + L + ++ EY L+EE I + F +++ DE+
Sbjct: 59 WIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESI-RDNFVIIYELLDEL 117
Query: 117 ISLGHKENVTVAQVKQYCEMESHE 140
+ G+ + +++Y E H+
Sbjct: 118 MDFGYPQTTDSKILQEYITQEGHK 141
Score = 71 (30.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 50/243 (20%), Positives = 100/243 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIETGGNPGILF------ 344
+ L V E +N+ + +G + ++ G++ +++ G+ ++++ G N +LF
Sbjct: 171 VFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLS--GMPELRL--GLNDKVLFDNTGRG 226
Query: 345 ----------KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCW- 393
K H + F ++ + P+ F + +R+ + + PL W
Sbjct: 227 KSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEF-ELMSYRLNT---HVKPLI---WI 279
Query: 394 PSVSGNETYVSIEY--EASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNS 447
SV ++ IEY +A + F R NV I +P+P ++P + G ++ NS
Sbjct: 280 ESVIEKHSHSRIEYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENS 339
Query: 448 VLEWTILLIDNSNRS-GSMEFVVPPA---DSSSFFPISVRFSA---TSTYSDLKVVNIIP 500
+ W++ F +P D PISV+F T++ ++ + II
Sbjct: 340 EIVWSVKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIE 399
Query: 501 LRG 503
G
Sbjct: 400 KSG 402
>ZFIN|ZDB-GENE-040801-159 [details] [associations]
symbol:ap1m3 "adaptor-related protein complex 1, mu
3 subunit" species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA]
InterPro:IPR001392 InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR018240 Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314
PROSITE:PS00990 PROSITE:PS51072 ZFIN:ZDB-GENE-040801-159
GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
GeneTree:ENSGT00530000062779 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:CABZ01069518 EMBL:CABZ01069519
IPI:IPI00859652 Ensembl:ENSDART00000057732 ArrayExpress:F1Q997
Bgee:F1Q997 Uniprot:F1Q997
Length = 423
Score = 93 (37.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 36/146 (24%), Positives = 63/146 (43%)
Query: 1 MVVLAASIVSKSGKILVSRQF---VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYV 57
M A I+ GK+L+ R + +DM+ I + + K + V + ++
Sbjct: 1 MAASAIFILDLKGKVLICRNYMGNIDMNVI--DNFMPIMMKREEEAELSPVVIHGSTHFL 58
Query: 58 YQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICK---TAFELLFAFD 114
+ LYL+ +T K +N L L ++ EY SL+EE I T +EL+ D
Sbjct: 59 WIKHSNLYLVAMTKKNTNAALVYSFLYKLVEVFTEYFKSLEEESIRDNFVTVYELM---D 115
Query: 115 EVISLGHKENVTVAQVKQYCEMESHE 140
EV+ G + + +Y + H+
Sbjct: 116 EVMDFGFPQTTDSKILLEYITQQGHK 141
Score = 74 (31.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 27/102 (26%), Positives = 45/102 (44%)
Query: 403 VSIEYEASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDN 458
V I+ +A + F R NV I VP+P+ ++P + G+ ++ S +EW I
Sbjct: 291 VEIKVKARSQFKSRSTANNVSILVPVPSDADSPKFKTTTGQAKWVPEKSAVEWNIKSFPG 350
Query: 459 SNR-SGSMEFVVPPADSSSFF---PISVRFSATS-TYSDLKV 495
F +P +S PI+V+F T S ++V
Sbjct: 351 GKEFMMRAHFGLPSVESDELEGKRPITVKFEIPYFTVSGIQV 392
>UNIPROTKB|C9JC87 [details] [associations]
symbol:AP4M1 "AP-4 complex subunit mu-1" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR001392 InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR018240 Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314
PROSITE:PS00991 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 HOGENOM:HOG000173245 OMA:GLQIRFL HGNC:HGNC:574
ChiTaRS:AP4M1 EMBL:AC073842 IPI:IPI00423366
ProteinModelPortal:C9JC87 SMR:C9JC87 STRING:C9JC87
Ensembl:ENST00000429084 ArrayExpress:C9JC87 Bgee:C9JC87
Uniprot:C9JC87
Length = 460
Score = 89 (36.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 44/182 (24%), Positives = 75/182 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQIL-----NQEDGLIQV----QIETGG-NP 340
+ L V E+++V + +G + DVQG + L+ GL + + E G P
Sbjct: 194 VFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVGKSELRGYGP 253
Query: 341 GILFKT---HPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCWPSV- 396
GI H ++N + F IL L+ P + + R Q +D+ PL +PSV
Sbjct: 254 GIRVDEVSFHSSVNLDEFESHRILRLQPPQG---ELTVMRYQLSDDLPSPLPFRLFPSVQ 310
Query: 397 ----SGN-ETYVSIEYEASTMFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEW 451
SG + Y+ + + + NV + +PLP + S E + + L W
Sbjct: 311 WDRGSGRLQVYLKLRCDLLSKSQALNVRLHLPLPRGVVSLSQELSSPEQKAELAEGALRW 370
Query: 452 TI 453
+
Sbjct: 371 DL 372
Score = 78 (32.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 64 LYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLGHKE 123
LYL++ T++ + LE L L+ L+ +Y SL E I + + DEV+ G+ +
Sbjct: 71 LYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVLDYGYVQ 130
Query: 124 NVTVAQVKQYCEMESHEEKLHKLVVQSKI 152
+ ++ + + E+ K L S +
Sbjct: 131 TTSTEMLRNFIQTEAVVSKPFSLFDLSSV 159
>WB|WBGene00000150 [details] [associations]
symbol:apm-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009306
"protein secretion" evidence=IMP] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 GO:GO:0040007 GO:GO:0040010
GO:GO:0006886 GO:GO:0002119 GO:GO:0016192 GO:GO:0040011
GO:GO:0009306 GO:GO:0030131 eggNOG:NOG315786
GeneTree:ENSGT00530000062779 HOGENOM:HOG000173247 KO:K12393
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
EMBL:FO080647 PIR:T15189 RefSeq:NP_491572.2 HSSP:Q96CW1
ProteinModelPortal:O01755 SMR:O01755 STRING:O01755 PaxDb:O01755
EnsemblMetazoa:F55A12.7 GeneID:172180 KEGG:cel:CELE_F55A12.7
UCSC:F55A12.7 CTD:172180 WormBase:F55A12.7 InParanoid:O01755
OMA:REYIMRS NextBio:874351 Uniprot:O01755
Length = 426
Score = 113 (44.8 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 36/178 (20%), Positives = 84/178 (47%)
Query: 1 MVVLAASIVSKSGKILVSRQF---VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYV 57
M + I+ G +++SR + VDMS I E + + G + + + Y
Sbjct: 1 MSISGLFILDLKGNVVISRNYRGDVDMSCI--EKFMPLLVEKEDEGSASPVLVHQGISYT 58
Query: 58 YQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFA-FDEV 116
Y +YL+ ++ K +N++ L L + ++ EY +L+EE + + F +++ FDE+
Sbjct: 59 YIKYMNVYLVTISKKNTNVILVLSALYKIVEVFCEYFKTLEEEAV-RDNFVIIYELFDEM 117
Query: 117 ISLGHKENVTVAQVKQYCEMESHE-EKLHK-LVVQSKINETKDVMKRKASEIDKSKIE 172
+ G+ + ++++ + + E + + V + ++ + +K + +E+ IE
Sbjct: 118 LDFGYPQTTESKILQEFITQQGNRLETVRPPMAVTNAVSWRSEGIKYRKNEVFLDVIE 175
Score = 49 (22.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 26/103 (25%), Positives = 45/103 (43%)
Query: 405 IEY--EASTMFDLRNVV----ISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLIDN 458
+EY +A + F ++V + +P+P+ AP + G +Y + + W+I
Sbjct: 294 VEYMVKAKSQFKRQSVANHVEVIIPVPSDVSAPKFKTGAGTAKYVPELNAIVWSIRSFPG 353
Query: 459 SNRSGSME--FVVPPADSSSFF---PISVRFSATS-TYSDLKV 495
R M F++P S PI+V+F T S L+V
Sbjct: 354 G-REYIMRSSFMLPSIGSEELEGRPPINVKFEIPYYTTSGLQV 395
>UNIPROTKB|F1PYG5 [details] [associations]
symbol:AP1M1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035646 "endosome to melanosome transport"
evidence=IEA] [GO:0032438 "melanosome organization" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR001392
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR018240
Pfam:PF00928 PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990
PROSITE:PS00991 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 GeneTree:ENSGT00530000062779 OMA:IVGSVKM
GO:GO:0035646 GO:GO:0032438 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:AAEX03012309
Ensembl:ENSCAFT00000024981 Uniprot:F1PYG5
Length = 463
Score = 96 (38.9 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 32/144 (22%), Positives = 64/144 (44%)
Query: 1 MVVLAASIVSKSGKILVSRQF---VDMSRIRIEGLLAAFPKLVGTGKQHTYVETENVRYV 57
M A ++ GK+L+ R + VDMS + E + + G + VR++
Sbjct: 29 MSASAVYVLDLKGKVLICRNYRGDVDMSEV--EHFMPILMEKEEEGMLSPILAHGGVRFM 86
Query: 58 YQPIEALYLLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAF-DEV 116
+ LYL+ + K + + L + ++ EY L+EE I + F +++ DE+
Sbjct: 87 WIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEESI-RDNFVIIYELLDEL 145
Query: 117 ISLGHKENVTVAQVKQYCEMESHE 140
+ G+ + +++Y E H+
Sbjct: 146 MDFGYPQTTDSKILQEYITQEGHK 169
Score = 68 (29.0 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 40/173 (23%), Positives = 70/173 (40%)
Query: 345 KTHPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCW-PSVSGNETYV 403
K H + F ++ + P+ F + +R+ + + PL W SV ++
Sbjct: 277 KFHQCVRLSRFENDRTISFIPPDGEF-ELMSYRLNT---HVKPLI---WIESVIEKHSHS 329
Query: 404 SIEY--EASTMFDLR----NVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEWTILLID 457
IEY +A + F R NV I +P+P ++P + G ++ NS + W+I
Sbjct: 330 RIEYMIKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKWVPENSEIVWSIKSFP 389
Query: 458 NSNRS-GSMEFVVPPA---DSSSFFPISVRFSA---TSTYSDLKVVNIIPLRG 503
F +P D PISV+F T++ ++ + II G
Sbjct: 390 GGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQVRYLKIIEKSG 442
>MGI|MGI:1337063 [details] [associations]
symbol:Ap4m1 "adaptor-related protein complex AP-4, mu 1"
species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=TAS]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=TAS] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990 PROSITE:PS00991
PROSITE:PS51072 MGI:MGI:1337063 GO:GO:0005794 GO:GO:0006886
GO:GO:0016192 GO:GO:0005905 GO:GO:0005802 GO:GO:0030131
GeneTree:ENSGT00530000062779 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 CTD:9179 eggNOG:NOG281769
HOGENOM:HOG000173245 HOVERGEN:HBG102734 KO:K12402 OMA:GLQIRFL
EMBL:AF242858 EMBL:BC011174 IPI:IPI00122829 RefSeq:NP_067367.3
UniGene:Mm.113205 ProteinModelPortal:Q9JKC7 SMR:Q9JKC7
STRING:Q9JKC7 PhosphoSite:Q9JKC7 PRIDE:Q9JKC7
Ensembl:ENSMUST00000019662 GeneID:11781 KEGG:mmu:11781
UCSC:uc009aev.2 InParanoid:Q9JKC7 NextBio:279583 Bgee:Q9JKC7
CleanEx:MM_AP4M1 Genevestigator:Q9JKC7
GermOnline:ENSMUSG00000019518 Uniprot:Q9JKC7
Length = 449
Score = 83 (34.3 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 37/154 (24%), Positives = 64/154 (41%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQILNQEDGLIQVQIET----------GGNP 340
+ L V E+++V + +G + DVQG + L+ I + + G P
Sbjct: 187 VFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEICIGLTEEFCVGKSELRGYGP 246
Query: 341 GILFKT---HPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCWPSV- 396
GI H ++N + F IL L+ P + + R Q +D+ PL +PSV
Sbjct: 247 GIRVDEVSFHSSVNLDEFESHRILRLQPPQG---ELTVMRYQLSDDLPSPLPFRLFPSVQ 303
Query: 397 ----SGN-ETYVSIEYEASTMFDLRNVVISVPLP 425
SG + Y+ + + N+ + +PLP
Sbjct: 304 WDQGSGRLQVYLKLRCDLPPKSQALNIHLHLPLP 337
Score = 81 (33.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 36/147 (24%), Positives = 63/147 (42%)
Query: 8 IVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGT-GKQHTYVETENVR-YVYQPIEALY 65
I+S G L+ + F S R L + KL G G + V R +++ LY
Sbjct: 7 ILSSKGDPLIYKDFRGDSGGRDVAELF-YRKLTGLPGGESPVVMYHGDRHFIHIRHSGLY 65
Query: 66 LLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLGHKENV 125
L+ T + + LE L L+ L+ +Y SL+E I + + DEV+ G+ +
Sbjct: 66 LVATTLENVSPFSLLELLSRLATLLGDYCGSLNEGTISRNVALVYELLDEVLDYGYVQTT 125
Query: 126 TVAQVKQYCEMESHEEKLHKLVVQSKI 152
+ ++ + + E+ K L S +
Sbjct: 126 STEMLRNFIQTEAVVSKPFSLFDLSSV 152
>UNIPROTKB|Q29RY8 [details] [associations]
symbol:AP4M1 "AP-4 complex subunit mu-1" species:9913 "Bos
taurus" [GO:0005905 "coated pit" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR001392 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR018240 Pfam:PF00928
PIRSF:PIRSF005992 PRINTS:PR00314 PROSITE:PS00990 PROSITE:PS00991
PROSITE:PS51072 GO:GO:0005794 GO:GO:0006886 GO:GO:0016192
GO:GO:0005905 GO:GO:0030131 GeneTree:ENSGT00530000062779
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
EMBL:BC113334 IPI:IPI00697299 RefSeq:NP_001070567.1
UniGene:Bt.59228 ProteinModelPortal:Q29RY8 PRIDE:Q29RY8
Ensembl:ENSBTAT00000003736 GeneID:768040 KEGG:bta:768040 CTD:9179
eggNOG:NOG281769 HOGENOM:HOG000173245 HOVERGEN:HBG102734
InParanoid:Q29RY8 KO:K12402 OMA:GLQIRFL OrthoDB:EOG4RJG1M
NextBio:20918395 Uniprot:Q29RY8
Length = 452
Score = 84 (34.6 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 36/147 (24%), Positives = 64/147 (43%)
Query: 8 IVSKSGKILVSRQFVDMSRIRIEGLLAAFPKLVGT-GKQHTYVETENVR-YVYQPIEALY 65
I+S G L+ + F S R L + KL G G + V + R +++ LY
Sbjct: 7 ILSSKGDPLIYKDFRGDSGGRDVAELF-YRKLTGLPGDESPVVMHHDDRHFIHIRHSGLY 65
Query: 66 LLLVTNKQSNILEDLETLRLLSKLVPEYSYSLDEEGICKTAFELLFAFDEVISLGHKENV 125
L+ T++ + LE L L+ L+ +Y SL E I + + DEV+ G+ +
Sbjct: 66 LVATTSENISPFSLLELLSRLATLLGDYCGSLGEATISRNVALVYELLDEVLDYGYVQTT 125
Query: 126 TVAQVKQYCEMESHEEKLHKLVVQSKI 152
+ ++ + + E+ K L S +
Sbjct: 126 STEVLRNFIQTEAVVSKPFSLFDLSSV 152
Score = 79 (32.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 43/182 (23%), Positives = 73/182 (40%)
Query: 291 ITLTVEEKINVSLKRDGGMSNFDVQGTLSLQIL-----NQEDGLIQV----QIETGG-NP 340
+ L V E+++V + +G + DVQG + L+ GL + + E G P
Sbjct: 187 VFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVGKSELRGYGP 246
Query: 341 GILFKT---HPNMNKELFTHENILGLKDPNRPFPQAKLWRMQSADESMVPLTINCWPSV- 396
GI H ++ + F IL L+ P + + R Q +D+ PL +PSV
Sbjct: 247 GIRVDEVSFHSSVYLDEFESHRILRLQPPQG---ELTVMRYQLSDDLPSPLPFRLFPSVQ 303
Query: 397 ----SGN-ETYVSIEYEASTMFDLRNVVISVPLPALREAPSVRQIDGEWRYDSRNSVLEW 451
SG + Y+ + + NV + +PLP + S E + + L W
Sbjct: 304 WDRGSGRLQVYLKLRCDLPPKSQALNVRLHLPLPRGVVSLSQELSSPEQKAELGEGALRW 363
Query: 452 TI 453
+
Sbjct: 364 DL 365
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.132 0.369 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 523 494 0.00083 119 3 11 23 0.44 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 610 (65 KB)
Total size of DFA: 257 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 41.93u 0.14s 42.07t Elapsed: 00:00:03
Total cpu time: 41.94u 0.14s 42.08t Elapsed: 00:00:03
Start: Fri May 10 06:46:41 2013 End: Fri May 10 06:46:44 2013