Your job contains 1 sequence.
>042404
NDIRELVLELGEGEWFRVPSCLFNCRKLTRLELFRCEFDPPLTFTGFPCLRSLNLHQVLV
APEAIESLISSCPLLESLSLSYFDSLDLNICAPELKYLYLEGEFKDIHLESTPLLVSMSI
AMYMTDDIAEHFEQSSSCNFLKILGGVPHLEKLVGYIYFTKYLSIGDDPGRLPITYNHLK
VIELYQVSFEDMKEILVVIRLITNSPNLKELHISGSSNTLAAIEAPDLDFWEKECHADCS
FKQLKLVKMTDISGVPHEMELIKFLLSNSPVLEIMSITPCTFVTERKVNMLIELVRFIRA
SPRAEIIFIQN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042404
(311 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2010032 - symbol:AT1G13570 "AT1G13570" species... 865 1.6e-86 1
TAIR|locus:2082657 - symbol:AT3G54910 "AT3G54910" species... 128 5.5e-08 2
TAIR|locus:2162499 - symbol:AT5G22670 "AT5G22670" species... 110 0.00016 2
TAIR|locus:2096039 - symbol:AT3G62430 "AT3G62430" species... 92 0.00024 3
TAIR|locus:2159883 - symbol:AT5G38570 "AT5G38570" species... 117 0.00025 1
TAIR|locus:505006162 - symbol:AT1G32375 "AT1G32375" speci... 101 0.00045 2
>TAIR|locus:2010032 [details] [associations]
symbol:AT1G13570 "AT1G13570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF81383 InterPro:IPR006566 SMART:SM00579 EMBL:AC027134
InterPro:IPR013101 Pfam:PF07723 Pfam:PF08387 EMBL:AK118468
EMBL:BT026442 IPI:IPI00528188 PIR:G86268 RefSeq:NP_172814.1
UniGene:At.42960 ProteinModelPortal:Q9FZ70 SMR:Q9FZ70
EnsemblPlants:AT1G13570.1 GeneID:837918 KEGG:ath:AT1G13570
TAIR:At1g13570 eggNOG:NOG237917 HOGENOM:HOG000090890
InParanoid:Q9FZ70 OMA:ATENNIG PhylomeDB:Q9FZ70
ProtClustDB:CLSN2682710 Genevestigator:Q9FZ70 Uniprot:Q9FZ70
Length = 416
Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
Identities = 174/311 (55%), Positives = 223/311 (71%)
Query: 1 NDIRELVLELGEGEWFRVPSCLFNCRKLTRLELFRCEFDPPLTFTGFPCLRSLNLHQVLV 60
N I+ELVL+LGEGE FRVP+CLFNC KLT LEL CEFDPP F GF L+SLNLHQ+LV
Sbjct: 109 NGIKELVLKLGEGE-FRVPACLFNCLKLTCLELCHCEFDPPQYFKGFSYLKSLNLHQILV 167
Query: 61 APEAIEXXXXXXXXXXXXXXXXXXXXXXNICAPELKYLYLEGEFKDIHLESTPLLVSMSI 120
APE IE +I AP L YLYL+GEFKDI LE+TP LV++S+
Sbjct: 168 APEVIESLISGCPLLEFLSLSYFDSLVLSISAPNLMYLYLDGEFKDIFLENTPKLVAISV 227
Query: 121 AMYMTDDIAEHFEQSSSCNFLKILGGVPHLEKLVGYIYFTKYLSIGDDPGRLPITYNHLK 180
+MYM +D+ + FEQSS N +K LGGVP LEKLVGYIYFTKYLSIGDDPGRLP+TY HLK
Sbjct: 228 SMYMHEDVTD-FEQSSDYNLVKFLGGVPLLEKLVGYIYFTKYLSIGDDPGRLPLTYIHLK 286
Query: 181 VIELYQVSFEDMKEILVVIRLITNSPNLKELHISGSSNTLAAIEAPDLDFWEKECHADCS 240
IELYQV FED E+LV++RL+T+SPNLKEL +S S +E D +E++ + D
Sbjct: 287 TIELYQVCFEDADEVLVLLRLVTHSPNLKELKVSASPVQPFPLEEEGFDLFERD-YFDYK 345
Query: 241 FKQLKLVKMTDISGVPHEMELIKFLLSNSPVLEIMSITPCTFVTERKVNMLIELVRFIRA 300
L+ VK+TD SG+ +E+E I+FLL SPVLE ++++ + K++M+IEL+R+ R
Sbjct: 346 LPSLESVKITDASGIRYELEFIRFLLGTSPVLETVTVSSSLSDKDAKMDMVIELLRYPRV 405
Query: 301 SPRAEIIFIQN 311
SPRA+++F+Q+
Sbjct: 406 SPRAQLLFLQD 416
>TAIR|locus:2082657 [details] [associations]
symbol:AT3G54910 "AT3G54910" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002686 GenomeReviews:BA000014_GR
InterPro:IPR006566 SMART:SM00579 InterPro:IPR013101 Pfam:PF07723
HOGENOM:HOG000220924 Pfam:PF08387 eggNOG:NOG277472
ProtClustDB:CLSN2680913 EMBL:BT022050 IPI:IPI00541943
RefSeq:NP_001030863.1 RefSeq:NP_001078289.1 RefSeq:NP_191051.2
UniGene:At.50278 ProteinModelPortal:Q501B7 SMR:Q501B7 PaxDb:Q501B7
EnsemblPlants:AT3G54910.1 EnsemblPlants:AT3G54910.2
EnsemblPlants:AT3G54910.3 GeneID:824656 KEGG:ath:AT3G54910
TAIR:At3g54910 InParanoid:Q501B7 PhylomeDB:Q501B7
Genevestigator:Q501B7 Uniprot:Q501B7
Length = 373
Score = 128 (50.1 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 47/164 (28%), Positives = 78/164 (47%)
Query: 150 LEKLVGYIYFTKYLSIGD----DPGRLPITYNHLKVIELYQVSFEDMKEILVVIRLITNS 205
++ L+G I K LSI D G +N LK ++L + ++LV RL+ +S
Sbjct: 220 IKSLIGSITSVKRLSICSQAMYDGG---FVFNQLKHLKLCRCKGHS-SDLLV--RLLKDS 273
Query: 206 PNLKELHISGSSNTLAAIEAPDLDFWEKECHA-DCSFKQLKLVKMTDISGVPHEMELIKF 264
NL+ L +S + E D+ +W + +C L+ + ++ G P E +L +
Sbjct: 274 SNLQALDLS----EMDYHENHDILYWHQPSTVPECMLLSLQTLNLSAYRGTPEERDLAVY 329
Query: 265 LLSNSPVLEIMSITPCTFVTERKVNMLIELVRFIRASPRAEIIF 308
L N+ L+ +I C F ER +ML EL RAS +++F
Sbjct: 330 FLKNAVHLKTTTIKSCVFDDER-FDMLKELALSSRASTTCQLVF 372
Score = 61 (26.5 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 18 VPSCLFNCRKLTRLELF-RCEFDPP-LTFTGFPCLRSLNLHQV 58
+PS L+ C+ L LEL D P + F P L++L LH V
Sbjct: 81 LPSNLYTCKSLVILELCGEIRLDVPRMAF--LPSLKTLQLHSV 121
>TAIR|locus:2162499 [details] [associations]
symbol:AT5G22670 "AT5G22670" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 InterPro:IPR006566 SMART:SM00579 EMBL:AB006699
InterPro:IPR013101 Pfam:PF07723 HOGENOM:HOG000015216 Pfam:PF08387
IPI:IPI00522053 RefSeq:NP_197659.1 UniGene:At.54952
ProteinModelPortal:Q9FNJ4 SMR:Q9FNJ4 EnsemblPlants:AT5G22670.1
GeneID:832330 KEGG:ath:AT5G22670 TAIR:At5g22670 eggNOG:NOG330716
InParanoid:Q9FNJ4 OMA:CEVVVEV PhylomeDB:Q9FNJ4
ProtClustDB:CLSN2916935 Genevestigator:Q9FNJ4 Uniprot:Q9FNJ4
Length = 443
Score = 110 (43.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 61/226 (26%), Positives = 98/226 (43%)
Query: 90 ICAPELKYLYL-EGEFKDIHLES--TPLLVSMSIAMYMTDDIAEHFEQSSSC--NFLKIL 144
I AP L YL L + + K L S +P V + + + + ++F + S NF L
Sbjct: 231 IDAPRLSYLSLRDDQSKSFVLSSVTSPAKVDIDVTFDVVRSVLKNFLLTRSVVRNFFTRL 290
Query: 145 GGVPHLEKLVGYI-YFTKYLSIGDDPGRLPITYNHLKVIELYQVSFEDMKEILVVIRLIT 203
V + + ++Y+ +P LP N +I+ Y V E L +
Sbjct: 291 SSVRDMTMSGTTLKVLSRYMR--HEP--LPQFPN---MIQFYAVFCNSDLEKLP--NFLE 341
Query: 204 NSPNLKELHISGSSNTLAAIEAPDLDFWEKECHADCSFKQLKLVKM-TDISGVPHEMELI 262
+ PNLK L + L + DL C L+ V++ T ISG EM+L+
Sbjct: 342 SCPNLKSLVLE-----LEVFKKNDLLILSSSI-PKCLRSSLEHVEIHTPISGAEAEMKLV 395
Query: 263 KFLLSNSPVLEIMSIT-PCTFVTERKVNMLIELVRFIRASPRAEII 307
K+ L NS VL+ ++ C + E + + EL+RF R S E++
Sbjct: 396 KYFLENSAVLKKFTLQLGCKRMDEESI-IFKELLRFRRCSASCEVV 440
Score = 50 (22.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/60 (25%), Positives = 23/60 (38%)
Query: 1 NDIRELVLELGEGEWFR-----VPSCLFNCRKLTRLELFRCEFDPPLTFTGFPCLRSLNL 55
N ++ V L G W +P L+ C L L L P P L++++L
Sbjct: 105 NAVKRKVQHLDIGRWSYLGQELIPHSLYTCETLVSLRLHNVSL-PDFDHVSLPRLKTMHL 163
>TAIR|locus:2096039 [details] [associations]
symbol:AT3G62430 "AT3G62430" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR006566
SMART:SM00579 EMBL:AL162507 HOGENOM:HOG000015201 InterPro:IPR013101
Pfam:PF07723 IPI:IPI00530316 PIR:T48035 RefSeq:NP_191802.1
UniGene:At.54037 ProteinModelPortal:Q9LZP7 SMR:Q9LZP7
EnsemblPlants:AT3G62430.1 GeneID:825416 KEGG:ath:AT3G62430
TAIR:At3g62430 InParanoid:Q9LZP7 OMA:ASSKCKV PhylomeDB:Q9LZP7
ProtClustDB:CLSN2684138 Genevestigator:Q9LZP7 Uniprot:Q9LZP7
Length = 437
Score = 92 (37.4 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 36/142 (25%), Positives = 67/142 (47%)
Query: 172 LPITYN--HLKVIELYQVSFEDMKEILVVIRLITNSPNLKEL-----HISGSSNTLAAIE 224
+P+ N HL V + ++D++ +L SPNLK L H G + + E
Sbjct: 304 VPVFENLFHLSVSTHDAICWDDLRILL------EKSPNLKTLTIEALHYHGYGDENSVCE 357
Query: 225 APDLDFWEKECHADCSFKQLKLVKMTDISGVPHEMELIKFLLSNSPVLEIMSITPCTFVT 284
D + C ++++K+T+ G EME ++++L N L ++ I T
Sbjct: 358 CLDGYSFLLSC-------PIEILKITEFGGEIEEMEQVEYVLENLLCLVLLEIHVKTKKI 410
Query: 285 ERKVNMLIELVRFIRASPRAEI 306
+RK+ +L +L+ RAS + ++
Sbjct: 411 DRKLQILADLLMLPRASSKCKV 432
Score = 60 (26.2 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 124 MTDDIAEHFEQSSSCNFLKILGGVPHLEKLV 154
+ D + F+ ++ C+F K++ P LE+LV
Sbjct: 157 LLDTVRFEFDNTAGCSFTKLISACPVLEELV 187
Score = 43 (20.2 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 3 IRELVLELGEGEWFRVPSCLFNCRKLTRLEL---FRCEFDPPLTFTGFPCLRSLNLHQV 58
+ +L L++ + +PS +F C+ + +++L F + P + P L++L L V
Sbjct: 105 VLDLELDINVRGDYSLPSEIFTCKSVVKMKLGSGFVIDILPKNAW--LPALKTLLLDTV 161
>TAIR|locus:2159883 [details] [associations]
symbol:AT5G38570 "AT5G38570" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 PROSITE:PS50181 EMBL:AB005231
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF81383
InterPro:IPR006566 SMART:SM00579 Pfam:PF08387 IPI:IPI00549113
IPI:IPI01020094 RefSeq:NP_198673.2 UniGene:At.55222
ProteinModelPortal:Q9FFW4 SMR:Q9FFW4 PRIDE:Q9FFW4 GeneID:833846
KEGG:ath:AT5G38570 TAIR:At5g38570 InParanoid:Q9FFW4
Genevestigator:Q9FFW4 Uniprot:Q9FFW4
Length = 379
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 42/162 (25%), Positives = 81/162 (50%)
Query: 149 HLEKLVGYIYFTKYLSIGDDPGRL---PITYNHLKVIELYQVSFEDMKEILVVIRLITNS 205
HL+ L+G I K+L+I L +NHL+ ++L F D +L +L+ S
Sbjct: 221 HLKTLIGSITSVKHLTICCLEDYLYGDGFIFNHLEHLKLCMCPF-DSSNLLG--QLLKGS 277
Query: 206 PNLKELHISGSSNTLAAIEAPDLDFWEKECHA-DCSFKQLKLVKMTDISGVPHEMELIKF 264
PNL+ L I ++ D+ W + +C LK++ + G P + ++ +
Sbjct: 278 PNLQVLDIF-------EMKRNDIVCWNQPSSVLECLLSSLKILNWSAYFGRPQDRDIAVY 330
Query: 265 LLSNSPVLEIMSITPCTFVTERKVNML--IELVRFIRASPRA 304
+L N+ L+ TF+T++++N + +++++ +R SPRA
Sbjct: 331 ILKNACHLKT-----ATFLTDKRINDVRRLKMIKELRLSPRA 367
>TAIR|locus:505006162 [details] [associations]
symbol:AT1G32375 "AT1G32375" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF81383
EMBL:AC007767 InterPro:IPR006566 SMART:SM00579 InterPro:IPR013101
Pfam:PF07723 HOGENOM:HOG000220924 Pfam:PF08387
ProtClustDB:CLSN2687176 IPI:IPI00535537 PIR:F86448
RefSeq:NP_564398.1 UniGene:At.51877 ProteinModelPortal:Q9LQM1
SMR:Q9LQM1 EnsemblPlants:AT1G32375.1 GeneID:840130
KEGG:ath:AT1G32375 TAIR:At1g32375 Genevestigator:Q9LQM1
Uniprot:Q9LQM1
Length = 422
Score = 101 (40.6 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 39/164 (23%), Positives = 71/164 (43%)
Query: 149 HLEKLVGYIYFTK--YLSIGDDPGRLPI--TYNHLKVIELYQVSFEDMKEILVVIRLITN 204
H ++L+G I K Y+ I P+ ++ L + + E + ++ V+R +
Sbjct: 263 HTQQLMGSISSVKRLYVCIPSSKDAYPVGSVFHCLVRLTICTCETEWLNLLMCVLR---D 319
Query: 205 SPNLKELHISGSSNTLAAIEAPDLDFWEKECHADCSFKQLKLVKMTDISGVPHEMELIKF 264
SP L+EL + N + P + E +C L+ ++ G E E+ F
Sbjct: 320 SPKLRELKLV--KNHVYRSHQPRPCWNEPSAVPECLLTSLETLEWVKYEGTEEEKEVAAF 377
Query: 265 LLSNSPVLEIMSITPCTFVTERKVNMLIELVRFIRASPRAEIIF 308
+L + L+ ++I+ + +K ML EL R SP +I F
Sbjct: 378 ILRSGSCLKKVTISSKSTDINKKFEMLKELSLLFRRSPTCQIAF 421
Score = 55 (24.4 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 22 LFNCRKLTRLELFRCEFDPPLTFT-GFPCLRSLNLHQVLVA 61
L NC L L + RC +D TFT L+ L LH+ +A
Sbjct: 175 LSNCPVLEDLVVKRCPYDNVTTFTVRVSSLKCLVLHETELA 215
Score = 52 (23.4 bits), Expect = 0.00090, Sum P(2) = 0.00090
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 3 IRELVLEL----GEGEWFRVPSCLFNC-RKLTRLELFRCEF-DPPLTFTGFPCLRSLNL 55
+REL++E+ + +P L+ C R L L+L D +F+ FP L++L+L
Sbjct: 103 LRELIIEIDKSNSDNSSVVLPRSLYTCCRMLVTLKLNNAVLVDATSSFS-FPSLKTLSL 160
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.141 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 311 289 0.00088 115 3 11 22 0.46 33
33 0.43 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 610 (65 KB)
Total size of DFA: 210 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.58u 0.15s 23.73t Elapsed: 00:00:01
Total cpu time: 23.58u 0.15s 23.73t Elapsed: 00:00:01
Start: Fri May 10 06:50:20 2013 End: Fri May 10 06:50:21 2013