Your job contains 1 sequence.
>042406
MLHLDRTPSTAGNKLKPEKFHNHRLRSKLAVWSFLFLTVFLFFFLISPSPSATFRRHSSG
GPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSL
KKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVES
NIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEA
IAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF
TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK
AETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSASASPSR
KKNF
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042406
(424 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 1505 2.4e-154 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 1483 5.2e-152 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 1424 1.2e-151 2
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 1456 3.8e-149 1
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 1323 4.7e-135 1
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 1289 1.9e-131 1
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 773 9.0e-77 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 752 1.5e-74 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 746 6.5e-74 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 746 6.5e-74 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 682 4.0e-67 1
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 682 4.0e-67 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 654 3.7e-64 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 316 2.4e-28 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 316 2.4e-28 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 303 5.7e-27 1
ZFIN|ZDB-GENE-060421-6479 - symbol:gale "UDP-galactose-4-... 296 3.2e-26 1
WB|WBGene00008132 - symbol:gale-1 species:6239 "Caenorhab... 289 1.8e-25 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 287 2.9e-25 1
TIGR_CMR|CHY_0545 - symbol:CHY_0545 "UDP-glucose 4-epimer... 287 2.9e-25 1
UNIPROTKB|Q14376 - symbol:GALE "UDP-glucose 4-epimerase" ... 285 4.6e-25 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 283 7.6e-25 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 283 7.6e-25 1
UNIPROTKB|I3LL84 - symbol:GALE "Uncharacterized protein" ... 282 9.7e-25 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 282 9.7e-25 1
UNIPROTKB|Q4QRB0 - symbol:Gale "Gale protein" species:101... 277 3.3e-24 1
UNIPROTKB|F1PI88 - symbol:GALE "Uncharacterized protein" ... 275 5.3e-24 1
TAIR|locus:2138121 - symbol:UGE2 "UDP-D-glucose/UDP-D-gal... 275 5.3e-24 1
UNIPROTKB|Q3T105 - symbol:GALE "Uncharacterized protein" ... 274 6.8e-24 1
MGI|MGI:1921496 - symbol:Gale "galactose-4-epimerase, UDP... 272 1.1e-23 1
UNIPROTKB|F1NWE5 - symbol:GALE "Uncharacterized protein" ... 267 4.3e-23 1
RGD|621493 - symbol:Gale "UDP-galactose-4-epimerase" spec... 267 4.3e-23 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 234 5.5e-23 2
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 259 3.8e-22 1
TAIR|locus:2123466 - symbol:UGE5 "UDP-D-glucose/UDP-D-gal... 257 1.3e-21 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 248 7.3e-21 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 246 1.2e-20 1
TAIR|locus:2204639 - symbol:MUR4 "MURUS 4" species:3702 "... 260 1.9e-20 1
TAIR|locus:2010371 - symbol:UGE1 "UDP-D-glucose/UDP-D-gal... 252 2.3e-20 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 241 1.4e-19 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 232 4.9e-19 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 235 6.7e-19 1
TAIR|locus:2015253 - symbol:UGE3 "UDP-D-glucose/UDP-D-gal... 240 1.5e-18 1
TAIR|locus:2163401 - symbol:DUR "DEFECTIVE UGE IN ROOT" s... 244 2.2e-18 1
UNIPROTKB|P09147 - symbol:galE species:83333 "Escherichia... 234 5.8e-18 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 234 5.8e-18 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 231 1.4e-17 1
UNIPROTKB|P27830 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 232 2.0e-17 1
TAIR|locus:2014235 - symbol:RHD1 "ROOT HAIR DEFECTIVE 1" ... 231 2.1e-17 1
UNIPROTKB|Q6A1A4 - symbol:galE "UDP-galactose 4-epimerase... 227 5.4e-17 1
TIGR_CMR|GSU_2366 - symbol:GSU_2366 "dTDP-glucose 4,6-deh... 228 6.6e-17 1
CGD|CAL0000448 - symbol:GAL10 species:5476 "Candida albic... 233 1.4e-16 1
UNIPROTKB|Q59VY6 - symbol:GAL10 "Putative uncharacterized... 233 1.4e-16 1
TIGR_CMR|CPS_2147 - symbol:CPS_2147 "UDP-glucose 4-epimer... 224 1.4e-16 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 225 1.5e-16 1
POMBASE|SPBC365.14c - symbol:uge1 "UDP-glucose 4-epimeras... 225 1.5e-16 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 224 2.4e-16 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 223 2.6e-16 1
UNIPROTKB|Q9KLH0 - symbol:VC_A0774 "UDP-glucose 4-epimera... 221 3.2e-16 1
TIGR_CMR|VC_A0774 - symbol:VC_A0774 "UDP-glucose 4-epimer... 221 3.2e-16 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 222 3.5e-16 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 222 3.5e-16 1
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 229 3.8e-16 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 220 4.6e-16 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 198 6.7e-16 2
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 216 1.0e-15 1
FB|FBgn0035147 - symbol:Gale "UDP-galactose 4'-epimerase"... 217 1.3e-15 1
TIGR_CMR|SO_1664 - symbol:SO_1664 "UDP-glucose 4-epimeras... 215 1.8e-15 1
TIGR_CMR|BA_5700 - symbol:BA_5700 "UDP-glucose 4-epimeras... 215 1.8e-15 1
UNIPROTKB|P37761 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 215 2.1e-15 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 209 2.8e-15 2
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 215 3.0e-15 2
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 211 3.3e-15 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 198 3.8e-15 2
UNIPROTKB|G4MX57 - symbol:MGG_08012 "UDP-glucose 4-epimer... 164 5.1e-15 2
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 199 5.9e-15 2
UNIPROTKB|P37759 - symbol:rfbB "RmlB" species:83333 "Esch... 211 8.1e-15 1
UNIPROTKB|Q5QPP1 - symbol:GALE "UDP-glucose 4-epimerase" ... 194 8.4e-15 1
UNIPROTKB|Q5QPP2 - symbol:GALE "UDP-glucose 4-epimerase" ... 194 8.4e-15 1
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 210 9.9e-15 1
UNIPROTKB|P26391 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 210 1.1e-14 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 209 1.2e-14 1
DICTYBASE|DDB_G0275295 - symbol:galE "UDP-glucose 4-epime... 208 1.5e-14 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 215 1.5e-14 1
UNIPROTKB|Q0C421 - symbol:HNE_0794 "Putative GDP-6-deoxy-... 206 1.7e-14 1
UNIPROTKB|P37777 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 208 1.9e-14 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 203 3.0e-14 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 205 3.5e-14 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 204 5.1e-14 1
TIGR_CMR|CJE_1273 - symbol:CJE_1273 "UDP-glucose 4-epimer... 202 5.9e-14 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 190 1.3e-13 2
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 198 1.8e-13 1
UNIPROTKB|P55293 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 192 1.4e-12 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 193 2.2e-12 1
POMBASE|SPBPB2B2.12c - symbol:gal10 species:4896 "Schizos... 196 2.3e-12 1
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 187 3.3e-12 1
ASPGD|ASPL0000035245 - symbol:AN2951 species:162425 "Emer... 104 3.4e-12 3
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 188 3.9e-12 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 186 7.0e-12 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 187 9.2e-12 1
WARNING: Descriptions of 110 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 1505 (534.8 bits), Expect = 2.4e-154, P = 2.4e-154
Identities = 295/435 (67%), Positives = 342/435 (78%)
Query: 1 MLHLDRTPSTAG----NKLKPEKF-HNHR-LR-SKLAVWSXXXXXXXXXXXXISPSPSAT 53
M HLD PST G +K+ P H+HR LR SKL +W+ +SP PS +
Sbjct: 1 MSHLDDLPSTPGKYKTDKVPPYGILHHHRYLRLSKLTLWASLFLALFLFYLVLSPPPSPS 60
Query: 54 FRR---HSS------GGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGD 104
R SS GG WEKQ+ KS RPRS GLTVLVTGA+GFVG+HVS+AL++RGD
Sbjct: 61 RRNLNDSSSISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGD 120
Query: 105 GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQ 164
GVLGLDNFN YY+ LK+AR+GLLER+GVFV++ DIND LL K+F+VV FTHVMHLAAQ
Sbjct: 121 GVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAAQ 180
Query: 165 AGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224
AGVRYAMQNP SYV SNIAGFVNLLE KS++PQPAIVWASSSSVYG+N KVPFSEKDRT
Sbjct: 181 AGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDRT 240
Query: 225 DQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKR 284
DQPASLYAATKKAGE IAH YNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFT+DI++GK
Sbjct: 241 DQPASLYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGKT 300
Query: 285 ITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPV 344
ITV+E+PD SVARDFTYIDDIVKGCL LDTA PA FRI+NLGNT+PV
Sbjct: 301 ITVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPV 360
Query: 345 PVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFV 404
PV++LV++LEK+LK+KA+ K++PLPRNGDV+FTHANI+LAQ ELGY P DLETGLKKFV
Sbjct: 361 PVTKLVTILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFV 420
Query: 405 RWYLSYYNSASASPS 419
+WY+ +Y + S
Sbjct: 421 KWYMGFYTGSKKKSS 435
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 1483 (527.1 bits), Expect = 5.2e-152, P = 5.2e-152
Identities = 291/429 (67%), Positives = 335/429 (78%)
Query: 1 MLHLDRTPSTAGNKLKPEKFHNHRLRS---KLAVWSXXXXXXXXXXXXISP------SPS 51
M HLD PST G K KP FH R +S KLA WS SP PS
Sbjct: 4 MSHLDDIPSTPG-KFKPY-FHRTRWQSSVAKLAFWSLVFVGLIFIFFYRSPVSSNPADPS 61
Query: 52 A-TFRRHSSGGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLD 110
+ R +S GGP WEK++ S R R+ RG +VLVTGAAGFVG+HVS ALK+RGDGVLGLD
Sbjct: 62 RRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLD 121
Query: 111 NFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYA 170
NFN+YY+ SLK+AR+ LLER+GVFV++ DIND +LL K+F VV FTHVMHLAAQAGVRYA
Sbjct: 122 NFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYA 181
Query: 171 MQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL 230
M+NP+SYV SNIAGFVNLLE CKS++PQPAIVWASSSSVYG+N KVPFSEKDRTDQPASL
Sbjct: 182 MENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL 241
Query: 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEA 290
YAATKKAGE IAH YNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFTRDI++GK I+++E
Sbjct: 242 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEG 301
Query: 291 PDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLV 350
+ +VARDFTYIDDIVKGCL LDTA A+ R+FNLGNT+PVPV+ LV
Sbjct: 302 VNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLV 361
Query: 351 SLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410
++LE++LKVKA+ ++ LPRNGDVQFTHANIS AQRELGY PTTDL+TGLKKF RWYL Y
Sbjct: 362 TILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKKFARWYLGY 421
Query: 411 YNSASASPS 419
YN + S
Sbjct: 422 YNGGKKAAS 430
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 1424 (506.3 bits), Expect = 1.2e-151, Sum P(2) = 1.2e-151
Identities = 268/378 (70%), Positives = 319/378 (84%)
Query: 47 SPS-PSA-TFRRHSSGGPQWEKQIVKSTRPRST--RGLTVLVTGAAGFVGSHVSLALKKR 102
SPS PS + R ++ GGP WEK++ S R R++ G+TVLVTGAAGFVG+HVS ALK+R
Sbjct: 60 SPSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRR 119
Query: 103 GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLA 162
GDGV+GLDNFN+YY+ SLK+AR+ LLER+G+F+++ DIND LL K+F +V+FTHVMHLA
Sbjct: 120 GDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLA 179
Query: 163 AQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222
AQAGVRYAM+NP+SYV SNIAGFVNLLE CKS +PQPAIVWASSSSVYG+N KVPFSEKD
Sbjct: 180 AQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKD 239
Query: 223 RTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRG 282
+TDQPASLYAATKKAGE IAH YNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFT+DI++G
Sbjct: 240 KTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKG 299
Query: 283 KRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTT 342
K I+++E+ + +VARDFTYIDDIVKGCLA LDTA PA+ R+FNLGNT+
Sbjct: 300 KSISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTS 359
Query: 343 PVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKK 402
PVPVS LV +LE+ LKVKA+ ++ +PRNGDV FTHANISLAQRELGY PTTDL+TGLKK
Sbjct: 360 PVPVSDLVRILERQLKVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKK 419
Query: 403 FVRWYLSYYNSASASPSR 420
FVRWYLSYY+ + +R
Sbjct: 420 FVRWYLSYYSGDKKAAAR 437
Score = 77 (32.2 bits), Expect = 1.2e-151, Sum P(2) = 1.2e-151
Identities = 33/93 (35%), Positives = 43/93 (46%)
Query: 1 MLHLDRTPSTAGNKLKPEKF-HNHRLR-----SKLAVWSXXXXXXXXXXXXISP------ 48
M LD PS+ G K K EK + HRLR +K A +S SP
Sbjct: 1 MSRLDDIPSSPG-KFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLISLLFLRSPPSINPS 59
Query: 49 SPSATFRR----HSSGGPQWEKQIVKSTRPRST 77
SPS RR ++ GGP WEK++ S R R++
Sbjct: 60 SPSDPSRRSLRTNTYGGPAWEKRLRSSARIRTS 92
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
Identities = 284/423 (67%), Positives = 331/423 (78%)
Query: 1 MLHLDRTPSTAGNKLKPEK--FHNHRLR-----SKLAVWSXXXXXXXXXXXXISP--SPS 51
M HLD PST G +K F HR R +KLA WS SP +P
Sbjct: 1 MSHLDDIPSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNPD 60
Query: 52 AT---FRRHSSGGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLG 108
++ R +S GGP WEK++ S R R+ G++VLVTGAAGFVG+HVS ALK+RGDGVLG
Sbjct: 61 SSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLG 120
Query: 109 LDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVR 168
LDNFN+YY+TSLK++R+ LLER+GVF+++ DIND SLL K+F VV FTHVMHLAAQAGVR
Sbjct: 121 LDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVR 180
Query: 169 YAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPA 228
YAM+NP SYV SNIAGFVNLLE CKS++PQPAIVWASSSSVYG+N KVPFSEKDRTDQPA
Sbjct: 181 YAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPA 240
Query: 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVY 288
SLYAATKKAGE IAH YNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFTRDI++GK I+++
Sbjct: 241 SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIF 300
Query: 289 EAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSR 348
E + +VARDFTYIDDIVKGCL LDTA A+ R+FNLGNT+PVPV+
Sbjct: 301 EGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTD 360
Query: 349 LVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL 408
LVS+LE++LKVKA+ ++ LPRNGDV FTHANIS AQRE GY P+TDL+TGLKKFVRWYL
Sbjct: 361 LVSILERLLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRWYL 420
Query: 409 SYY 411
YY
Sbjct: 421 GYY 423
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 1323 (470.8 bits), Expect = 4.7e-135, P = 4.7e-135
Identities = 259/411 (63%), Positives = 306/411 (74%)
Query: 8 PSTAGNKLKPEKFHN--HRL---RSKLAVWSXXXXXXXXXXXXISP--SPSATFRRHSSG 60
PST G K K ++ + HR S + +W+ + + S G
Sbjct: 10 PSTPG-KFKIDRSNRQLHRCFASTSTMFLWALFLIALTASYLSFQSFVDSGSRYLTASWG 68
Query: 61 GPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSL 120
G QWEKQ+ S + + G++VLVTGA GFVGSHVSLAL+KRGDGV+GLDNFNNYY+ SL
Sbjct: 69 GIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSL 128
Query: 121 KKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVES 180
K+AR+ LL G+FV++ D+ND LL K+F+VVAFTHVMHLAAQAGVRYA++NP SYV S
Sbjct: 129 KRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVHS 188
Query: 181 NIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEA 240
NIAG VNLLE CK+++PQPAIVWASSSSVYG+N+KVPFSE DRTDQPASLYAATKKAGE
Sbjct: 189 NIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGEE 248
Query: 241 IAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300
I H YNHIYGL+ITGLRFFTVYGPWGRPDMAYF FTR+I++GK IT+Y + +ARDF
Sbjct: 249 ITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGKNRVDLARDF 308
Query: 301 TYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360
TYIDDIVKGCL LD++ A +RIFNLGNT+PV V LV +LEK LKVK
Sbjct: 309 TYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVK 368
Query: 361 AETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
A+ + +P NGDV FTHANIS A+ E GY PTTDLETGLKKFVRWYLSYY
Sbjct: 369 AKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLSYY 419
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 1289 (458.8 bits), Expect = 1.9e-131, P = 1.9e-131
Identities = 237/361 (65%), Positives = 289/361 (80%)
Query: 51 SATFRRHSSGGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLD 110
S++ S GG WEK++ +S+ + GL+VLVTGAAGFVGSH SLAL+KRGDGVLG D
Sbjct: 83 SSSSSSSSIGGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFD 142
Query: 111 NFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYA 170
NFN+YY+ SLK+AR+ LLE+ VF+++ D+ND LL K+F+VV FTH++HLAAQAGVRYA
Sbjct: 143 NFNDYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYA 202
Query: 171 MQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL 230
M+NP SY+ SNIAGFVNLLE K+++PQPAIVWASSSSVYG+N + PFSE+ RTDQPASL
Sbjct: 203 MKNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTENPFSEEHRTDQPASL 262
Query: 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEA 290
YAATKKAGE IAH YNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFT+DI+ GK I +Y
Sbjct: 263 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKSIDIYRT 322
Query: 291 PDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLV 350
D VARDFTYIDDIVKGC+ LDTA A+ R++NLGNT+PVPV RLV
Sbjct: 323 QDNQEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLV 382
Query: 351 SLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410
S+LE +L KA+ ++ +PRNGDV +THAN+SLA ++ GY PTTDL GL+KFV+WY+ Y
Sbjct: 383 SILEGLLGTKAKKHLIKMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVGY 442
Query: 411 Y 411
Y
Sbjct: 443 Y 443
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 158/339 (46%), Positives = 219/339 (64%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA- 138
+ LVTG AGF+G H++ L RGD +LGLDN N+YY+ +LK+AR L+ F
Sbjct: 6 MRTLVTGCAGFIGFHLTKRLLARGDHILGLDNLNDYYDVNLKEARLAQLKEFPHFSFHKL 65
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D+ + +F F V+HLAAQAGVRY++ NP +YV+SN+ GF ++LE C+ +
Sbjct: 66 DLADRQGMTDLFQKHLFDTVVHLAAQAGVRYSLTNPYAYVDSNLVGFAHILEGCRHQSVK 125
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRF 258
+V+ASSSSVYG N+K PFSE D D P +LYAA+KKA E +AH+Y H++ L TGLRF
Sbjct: 126 H-LVFASSSSVYGANEKYPFSESDNVDHPIALYAASKKANELMAHSYAHLFQLPCTGLRF 184
Query: 259 FTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD-TA 317
FTVYGPWGRPDMA F FTR+++ K I VY + ++RDFTYIDDIV G L LD
Sbjct: 185 FTVYGPWGRPDMALFKFTRNLLADKPIDVY---NHGKMSRDFTYIDDIVDGILLTLDHPP 241
Query: 318 XXXXXXXXXXXXPAE----FRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGD 373
PA+ +RI+N+G+ P+ ++ +++LEK L KA LPL + GD
Sbjct: 242 EPNSAYSANQPNPAKSNAPYRIYNIGSNNPILLTNFIAILEKTLNKKAIKNFLPL-QPGD 300
Query: 374 VQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412
V T+A++S +++ Y P T L+ G+K FV WYL Y++
Sbjct: 301 VPETYADVSQLEKDFQYRPRTPLQKGVKNFVEWYLQYFS 339
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 752 (269.8 bits), Expect = 1.5e-74, P = 1.5e-74
Identities = 154/337 (45%), Positives = 214/337 (63%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLE-RAGVFVIDAD 139
++LVTGAAGF+G H++ L RGD V+GLDN N+YY+ +LK R LE R G +
Sbjct: 3 SILVTGAAGFIGFHLTKRLLDRGDRVVGLDNLNDYYDVNLKLDRLRQLEGREGFSFVRTS 62
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
+ D+ L+ +F F V++LAAQAGVRY++ NP++YV+SN+ GF+N+LE C+ +
Sbjct: 63 LADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYVDSNLVGFINILEGCRHHGVKH 122
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
+V+ASSSSVYG N +PFS D P SLYAATKKA E +AH Y+ +YGL TGLRFF
Sbjct: 123 -LVYASSSSVYGANTAMPFSIHHNVDHPVSLYAATKKANELMAHTYSSLYGLPTTGLRFF 181
Query: 260 TVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD-TAX 318
TVYGPWGRPDMA F FT+ I+ G+ I VY + RDFTY+DDIV+G +D T
Sbjct: 182 TVYGPWGRPDMALFLFTKAILEGRPIDVYNF---GKMQRDFTYVDDIVEGVTRVMDRTPE 238
Query: 319 XXXXXXXXXXXP----AEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDV 374
P A +RI+N+GN PV + + +E+ L + A+ +LPL + GDV
Sbjct: 239 PNPAWSGARPDPGTSYAPYRIYNIGNNNPVELLAFIEAIEQNLGITAQKNLLPL-QAGDV 297
Query: 375 QFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
T+A++ ++G+ P T + G+++FV WY YY
Sbjct: 298 PATYADVDDLMNDVGFKPATPIGEGIERFVEWYRGYY 334
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 155/335 (46%), Positives = 216/335 (64%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVF-VIDADIN 141
LVTGAAGF+G++VS L G V+G+DN N+YY+ +LK AR LE F I D+
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLDLA 63
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D+ + K+F F V+HLAAQAGVRY++ NP +Y +SN+ G + +LE C+ + +
Sbjct: 64 DREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEH-L 122
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTV 261
V+ASSSSVYG+N+K+PFS +D D P SLYAATKKA E ++H Y+H+Y L TGLRFFTV
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTV 182
Query: 262 YGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD-----T 316
YGPWGRPDMA F FT+ I+ G+ I VY D ++RDFTYIDDIV+G + D T
Sbjct: 183 YGPWGRPDMALFKFTKAILAGETIDVYNHGD---LSRDFTYIDDIVEGIIRVQDKPPSPT 239
Query: 317 AXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQF 376
A +R+FN+GN +PV + ++ LE+ L ++A+ + LP+ + GDV
Sbjct: 240 PDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPM-QPGDVHA 298
Query: 377 THANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
T A+ + +GY D++TG+ KFV WY ++Y
Sbjct: 299 TWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFY 333
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 746 (267.7 bits), Expect = 6.5e-74, P = 6.5e-74
Identities = 155/335 (46%), Positives = 216/335 (64%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVF-VIDADIN 141
LVTGAAGF+G++VS L G V+G+DN N+YY+ +LK AR LE F I D+
Sbjct: 4 LVTGAAGFIGANVSKRLCAMGHEVVGIDNLNDYYDVALKLARLAPLEALSNFHFIKLDLA 63
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D+ + K+F F V+HLAAQAGVRY++ NP +Y +SN+ G + +LE C+ + +
Sbjct: 64 DREGIAKLFAQQGFQRVIHLAAQAGVRYSLDNPLAYADSNLVGHLTILEGCRHHKIEH-L 122
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTV 261
V+ASSSSVYG+N+K+PFS +D D P SLYAATKKA E ++H Y+H+Y L TGLRFFTV
Sbjct: 123 VYASSSSVYGLNQKMPFSTEDSVDHPISLYAATKKANELMSHTYSHLYQLPTTGLRFFTV 182
Query: 262 YGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD-----T 316
YGPWGRPDMA F FT+ I+ G+ I VY D ++RDFTYIDDIV+G + D T
Sbjct: 183 YGPWGRPDMALFKFTKAILAGETIDVYNHGD---LSRDFTYIDDIVEGIIRVQDKPPSPT 239
Query: 317 AXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQF 376
A +R+FN+GN +PV + ++ LE+ L ++A+ + LP+ + GDV
Sbjct: 240 PDWRVETGTPANSSAPYRVFNIGNGSPVQLLDFITALERALGIEAKKQFLPM-QPGDVHA 298
Query: 377 THANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
T A+ + +GY D++TG+ KFV WY ++Y
Sbjct: 299 TWADTEDLFKAVGYKSQVDIDTGVAKFVDWYRNFY 333
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 138/334 (41%), Positives = 208/334 (62%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND 142
LVTGAAGF+GS V L G V+G+DN N+YY+ +LK+AR +E A I DI D
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIAD 63
Query: 143 KSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIV 202
++++ ++F F V+HLAAQAGVRY+++NP +Y +SN+ G +N+LE C+++ + ++
Sbjct: 64 RNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVKH-LI 122
Query: 203 WASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVY 262
+ASSSSVYG+N KVPFS KD D P SLYAATKK+ E +AH+Y+H+Y + TGLRFFTVY
Sbjct: 123 YASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFFTVY 182
Query: 263 GPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT-----A 317
G WGRPDMA + FT+ I+ G I + D + RDFT++DDIV+G + D A
Sbjct: 183 GSWGRPDMAPYIFTKKILNGDTIDINNNGD---MWRDFTHVDDIVEGVIRIADVIPERDA 239
Query: 318 XXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFT 377
A + ++N+G+ +P+ + V +E L ++A+ + + GDV T
Sbjct: 240 EWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREM-QPGDVYQT 298
Query: 378 HANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
+A+ + Y+P ++ G+ + V W+ +Y
Sbjct: 299 YADTQDLFKATNYVPKISVKEGVAELVVWFKDFY 332
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
Identities = 138/334 (41%), Positives = 208/334 (62%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND 142
LVTGAAGF+GS V L G V+G+DN N+YY+ +LK+AR +E A I DI D
Sbjct: 4 LVTGAAGFIGSAVVERLCAAGHDVVGIDNINDYYDIALKQARLARIEHASFSFIKMDIAD 63
Query: 143 KSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIV 202
++++ ++F F V+HLAAQAGVRY+++NP +Y +SN+ G +N+LE C+++ + ++
Sbjct: 64 RNVMAELFTAQQFDKVVHLAAQAGVRYSIENPMAYADSNLIGHLNVLEGCRNNQVKH-LI 122
Query: 203 WASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVY 262
+ASSSSVYG+N KVPFS KD D P SLYAATKK+ E +AH+Y+H+Y + TGLRFFTVY
Sbjct: 123 YASSSSVYGLNNKVPFSTKDTVDHPVSLYAATKKSNELMAHSYSHLYNIPTTGLRFFTVY 182
Query: 263 GPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT-----A 317
G WGRPDMA + FT+ I+ G I + D + RDFT++DDIV+G + D A
Sbjct: 183 GSWGRPDMAPYIFTKKILNGDTIDINNNGD---MWRDFTHVDDIVEGVIRIADVIPERDA 239
Query: 318 XXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFT 377
A + ++N+G+ +P+ + V +E L ++A+ + + GDV T
Sbjct: 240 EWKVESGSPATSSAPYSVYNIGHGSPISLMDFVKAIEDELGIEAKKNFREM-QPGDVYQT 298
Query: 378 HANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
+A+ + Y+P ++ G+ + V W+ +Y
Sbjct: 299 YADTQDLFKATNYVPKISVKEGVAELVVWFKDFY 332
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 654 (235.3 bits), Expect = 3.7e-64, P = 3.7e-64
Identities = 137/339 (40%), Positives = 199/339 (58%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA- 138
+ +LVTGAAGF+GS ++L L K G V G+D F YY+ LK+ R L F ++
Sbjct: 1 MKILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERI 60
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
I D ++ +F V+H AAQAGVRY++ +P ++++NI G N+++ + Q
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQAGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGTQ 120
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRF 258
+V AS+SS YG N+K PF E+D P ++YAATK A E IAH++ H+YG+ T LRF
Sbjct: 121 H-LVMASTSSAYGANQKFPFEERDSAPYPLTIYAATKLASELIAHSHAHLYGVPTTVLRF 179
Query: 259 FTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT-- 316
F+VYGPWGRPDMA+F FT I +G+ I V+ D + RDFTYIDD+V+ +DT
Sbjct: 180 FSVYGPWGRPDMAFFLFTDKIFKGQPIDVFNHGD---LLRDFTYIDDLVEAIRRLMDTPP 236
Query: 317 AXXXXXXXXXXXXP-AEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQ 375
P A +R+ N+GN +PV + + +E + KAE ++ + + GDV+
Sbjct: 237 VVGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNMIDM-QPGDVK 295
Query: 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
T A++ L GY P TD TG+ +FV WY Y+ A
Sbjct: 296 QTFADVRLLDALTGYTPDTDYRTGIARFVDWYRDYFKPA 334
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 103/342 (30%), Positives = 169/342 (49%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGV-F-VIDA 138
T L+TG AGF+GS++ L K V+GLDNF + +L + + + + F I+
Sbjct: 17 TWLITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFING 76
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D ++ + + N V + V+H AA V ++ +P + +NI GF+N+L+ K ++ +
Sbjct: 77 DIRDYAICEAVVNGVDY--VLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK 134
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRF 258
+ +A+SSS YG + +P E++ P S YA TK E A Y YG GLR+
Sbjct: 135 -SFTYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLRY 192
Query: 259 FTVYGPWGRPDMAYFF----FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK-GCLAG 313
F V+G P+ AY +T +I+G+ V+ DG + +RDF YID++V+ LA
Sbjct: 193 FNVFGRRQDPNGAYAAVIPKWTSSMIKGE--DVFINGDGET-SRDFCYIDNVVQMNILAA 249
Query: 314 LDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP---- 369
TA A+ ++N+ ++ L ++ L V P
Sbjct: 250 --TAASE----------AKNEVYNVAVGDRTTLNDLYFAIKDSLNANG-INVNQNPNYRD 296
Query: 370 -RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410
R GDV+ + A++S A LGY T + G+ + + WY +
Sbjct: 297 FRAGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKEF 338
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 103/342 (30%), Positives = 169/342 (49%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGV-F-VIDA 138
T L+TG AGF+GS++ L K V+GLDNF + +L + + + + F I+
Sbjct: 17 TWLITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQSLVTSEQWMRFSFING 76
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D ++ + + N V + V+H AA V ++ +P + +NI GF+N+L+ K ++ +
Sbjct: 77 DIRDYAICEAVVNGVDY--VLHQAALGSVPRSIADPITTNAANITGFLNMLQAAKEAEVK 134
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRF 258
+ +A+SSS YG + +P E++ P S YA TK E A Y YG GLR+
Sbjct: 135 -SFTYAASSSTYGDHPALPKVEQN-IGNPLSPYAVTKYVNELYASVYARTYGFETIGLRY 192
Query: 259 FTVYGPWGRPDMAYFF----FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK-GCLAG 313
F V+G P+ AY +T +I+G+ V+ DG + +RDF YID++V+ LA
Sbjct: 193 FNVFGRRQDPNGAYAAVIPKWTSSMIKGE--DVFINGDGET-SRDFCYIDNVVQMNILAA 249
Query: 314 LDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP---- 369
TA A+ ++N+ ++ L ++ L V P
Sbjct: 250 --TAASE----------AKNEVYNVAVGDRTTLNDLYFAIKDSLNANG-INVNQNPNYRD 296
Query: 370 -RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410
R GDV+ + A++S A LGY T + G+ + + WY +
Sbjct: 297 FRAGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKEF 338
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
Identities = 102/331 (30%), Positives = 153/331 (46%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ LVTGAAGF+GS + L G V+GLDNF T+L+ A VFV +AD
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADN---SAHVFV-EAD 56
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I L I V HLAAQ VR ++ +P N+ G V L E + + +
Sbjct: 57 IVTADL-HAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRK 115
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
+ +S S+YG + P E TD PAS YAA K AGE + + H+YGL + +
Sbjct: 116 IVHTSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPA 174
Query: 260 TVYGPWGRPDM---AYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316
VYGP P F + ++ GK V+ DG + RD+ ++DD+V +
Sbjct: 175 NVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFG--DGTNT-RDYVFVDDVVDAFVR---- 227
Query: 317 AXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQF 376
R FN+G +L S + + + + P PR GD++
Sbjct: 228 --------VSADVGGGLR-FNIGTGKETSDRQLHSAVAAAVGGPDDPEFHP-PRLGDLKR 277
Query: 377 THANISLAQRELGYMPTTDLETGLKKFVRWY 407
+ +I LA+R LG+ P +L G+++ V ++
Sbjct: 278 SCLDIGLAERVLGWRPQIELADGVRRTVEYF 308
>ZFIN|ZDB-GENE-060421-6479 [details] [associations]
symbol:gale "UDP-galactose-4-epimerase"
species:7955 "Danio rerio" [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 ZFIN:ZDB-GENE-060421-6479 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GeneTree:ENSGT00530000063128
EMBL:CR391986 IPI:IPI00758807 Ensembl:ENSDART00000135569
ArrayExpress:F1Q5H4 Bgee:F1Q5H4 Uniprot:F1Q5H4
Length = 350
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 103/347 (29%), Positives = 163/347 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE------TSLKKARKGLLERAGVFV 135
+LVTG G++GSH + L + G + +DNF+N SL++ K ++ F
Sbjct: 5 ILVTGGGGYIGSHCVVELIEAGFHPVVIDNFSNAVRGEGDVPESLRRIEK-FMDTQIEFH 63
Query: 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
+ D+ DK L+KIF + +F VMH A V +++ P Y N+ G +NLLE +S
Sbjct: 64 -ELDLLDKPGLEKIFKMHSFYAVMHFAGLKAVGESVEQPLRYYRVNLTGTINLLEVMQSH 122
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK-AGEAIAHAYNHIYGLSIT 254
+ +V++SS++VYG +K+P E+ + Y TK E I +
Sbjct: 123 GVRN-LVFSSSATVYGDPQKLPIDEQHPVGGCTNPYGKTKYFIEEMIRDQCTAEKDWNAV 181
Query: 255 GLRFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARD 299
LR+F G P G P+ + + I R K + V Y PDG V RD
Sbjct: 182 LLRYFNPIGAHISGQIGEDPQGIPNNLLPYVAQVAIGRRKHLNVFGNDYSTPDGTGV-RD 240
Query: 300 FTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKV 359
+ ++ D+ KG +A + +++NLG T V ++VS +EK
Sbjct: 241 YIHVVDLAKGHIAAVRKLKDS----------CGCKVYNLGTGTGYSVLQMVSAMEKASGR 290
Query: 360 KAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
K ++ P R+GDV +A+ SLA++ELG+ DLE + RW
Sbjct: 291 KIAYQIAPR-RSGDVASCYADASLAEKELGWKAEFDLERMCEDLWRW 336
>WB|WBGene00008132 [details] [associations]
symbol:gale-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0042335
"cuticle development" evidence=IGI;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0042335 GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:THAPIDA EMBL:Z99709 GeneID:173171
KEGG:cel:CELE_C47B2.6 UCSC:C47B2.6b CTD:173171 NextBio:878565
RefSeq:NP_001021052.1 ProteinModelPortal:Q564Q1 SMR:Q564Q1
STRING:Q564Q1 PRIDE:Q564Q1 EnsemblMetazoa:C47B2.6b
WormBase:C47B2.6b InParanoid:Q564Q1 ArrayExpress:Q564Q1
Uniprot:Q564Q1
Length = 349
Score = 289 (106.8 bits), Expect = 1.8e-25, P = 1.8e-25
Identities = 101/349 (28%), Positives = 160/349 (45%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY------YETSLKKARKGLLERAGVFV 135
+LVTGAAGF+GSH L L G VL +DNF N + ++ R L V
Sbjct: 3 ILVTGAAGFIGSHTVLELLNSGYTVLCIDNFANAISVTDEHGNAISLKRVAQLTGKDVPF 62
Query: 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
+ D+ D++ L+K+F+ F ++HLAA V ++ P Y +N+ +NL++ C
Sbjct: 63 QNVDVCDEAALEKVFSENKFDGIIHLAALKAVGESVAKPLQYYSNNLVASLNLIQMCLKY 122
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQP-ASLYAATKKAGEAIAHAYNHIYG-LSI 253
+ + V++SS++VYG ++P +EK +T Q + Y TK E I ++
Sbjct: 123 NVKN-FVFSSSATVYGPPSELPITEKSQTGQGITNPYGQTKYMMEQILIDVGKANPEWNV 181
Query: 254 TGLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITVY----EAPDGASVA 297
LR+F G P G P+ + ++ I GK +T+Y + DG V
Sbjct: 182 VLLRYFNPVGAHKSGLIGEDPKGVPNNLMPYVSQVAI-GKLPVLTIYGDQFDTVDGTGV- 239
Query: 298 RDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKIL 357
RD+ ++ D+ KG + D I+NLG V ++V L+K+
Sbjct: 240 RDYIHVVDLAKGHVKAFDRIKTVGNIGT--------EIYNLGTGVGYSVRQMVDALKKVS 291
Query: 358 KVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
K+ +PR GDV + + SLAQ +LG+ T LE W
Sbjct: 292 GRDIPVKI-GVPRPGDVASVYCDPSLAQEKLGWRAETGLEEMCADLWNW 339
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 105/345 (30%), Positives = 157/345 (45%)
Query: 78 RGLTVLVTGAAGFVGSH-VSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI 136
RG +V G AG +GSH V L++ V+ DNF +L +A + R ++ I
Sbjct: 5 RGKKFVVIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRD--PRTKIYDI 62
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
DIN +L+ V V H AA + + P S ++NI G N+LETC +
Sbjct: 63 GGDINQTDILNTALKGV--DGVFHFAA-LWLLQCYEYPRSAFQTNIQGTFNVLETCVAQG 119
Query: 197 PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGL 256
+ +V++SS+SVYG + P +E + + Y ATK AGEA+A AY+H YGL GL
Sbjct: 120 VK-RLVFSSSASVYGDALEEPMTEAHPFNS-RTFYGATKIAGEAMATAYHHRYGLPFVGL 177
Query: 257 RFFTVYGPWGRPDM--AYFFFTRDII----RGKRITVYEAPDGASVARDFTYIDDIVKG- 309
R+ VYGP R D AY ++ +G+ +T+Y DG S A DF Y++D
Sbjct: 178 RYMNVYGP--RQDYRGAYIAVIMKMLDALDKGQPMTLYG--DG-SQAYDFVYVEDCAAAN 232
Query: 310 -CLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPL 368
C DT E+ +N+G + L ++KI + LP
Sbjct: 233 ICAMKADTVD-------------EY--YNVGTGKRTSILELAKEIQKITGTSDNIQFLP- 276
Query: 369 PRNGDVQFTHANISL---AQRELGYMPTTDLETGLKKFVRWYLSY 410
G F I A ++G+ L GL++ + W S+
Sbjct: 277 --QGTT-FVKNRIGCPKKAAEQIGFKAEVGLTEGLQRLIEWRRSH 318
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 94/341 (27%), Positives = 165/341 (48%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+LVTG AG++GSH+ L + + VL +DN + K +K + RA + V D
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLS-------KGHKKAVDTRAKLIV--GDFG 52
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D++LL +IF V+H+AAQ+ V +M P Y E NI+ ++LL+ ++ + +
Sbjct: 53 DENLLLEIFKKYDIKAVIHMAAQSLVGESMSQPEKYFEENISKTLSLLKVMLKANVKK-M 111
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTV 261
V++S+++VYG +K P +E D +P ++Y +K E Y I+G + LR+F
Sbjct: 112 VFSSTAAVYGEPEKWPITE-DFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNA 170
Query: 262 YG--PWG------RPDMAYFFFTRDIIRGKR--ITV----YEAPDGASVARDFTYIDDIV 307
G P G P+ +I G++ +TV Y PDG + RD+ +++D+
Sbjct: 171 AGADPSGDIGEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCI-RDYIHVNDLA 229
Query: 308 KGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP 367
+ + L+ E ++NLGN V ++ + E++ VK + +
Sbjct: 230 EAHILALNKLNKD-----------ESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRY-G 277
Query: 368 LPRNGDVQFTHANISLAQRELGYMPTT-DLETGLKKFVRWY 407
R GD A+ Q+EL + P D++T ++ W+
Sbjct: 278 QRRPGDPAVLVASSEKIQKELNFTPKFGDIKTIVQTAWEWH 318
>UNIPROTKB|Q14376 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=EXP;IDA] [GO:0019388 "galactose catabolic
process" evidence=IDA;TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 GO:GO:0000166 GO:GO:0044281
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 EMBL:AL031295 OMA:ADKAWNA CTD:2582
EMBL:L41668 EMBL:AF022382 EMBL:BC001273 EMBL:BC050685
IPI:IPI00553131 RefSeq:NP_000394.2 RefSeq:NP_001008217.1
RefSeq:NP_001121093.1 UniGene:Hs.632380 PDB:1EK5 PDB:1EK6 PDB:1HZJ
PDB:1I3K PDB:1I3L PDB:1I3M PDB:1I3N PDBsum:1EK5 PDBsum:1EK6
PDBsum:1HZJ PDBsum:1I3K PDBsum:1I3L PDBsum:1I3M PDBsum:1I3N
ProteinModelPortal:Q14376 SMR:Q14376 IntAct:Q14376 STRING:Q14376
PhosphoSite:Q14376 DMDM:68056598 PaxDb:Q14376 PRIDE:Q14376
DNASU:2582 Ensembl:ENST00000374497 GeneID:2582 KEGG:hsa:2582
UCSC:uc001bhv.1 GeneCards:GC01M024122 HGNC:HGNC:4116 HPA:HPA007340
MIM:230350 MIM:606953 neXtProt:NX_Q14376 Orphanet:79238
PharmGKB:PA28531 HOVERGEN:HBG001396 InParanoid:Q14376
OrthoDB:EOG4B5P5D PhylomeDB:Q14376 BioCyc:MetaCyc:HS04117-MONOMER
SABIO-RK:Q14376 BindingDB:Q14376 ChEMBL:CHEMBL5843
EvolutionaryTrace:Q14376 GenomeRNAi:2582 NextBio:10213
ArrayExpress:Q14376 Bgee:Q14376 CleanEx:HS_GALE
Genevestigator:Q14376 GermOnline:ENSG00000117308 Uniprot:Q14376
Length = 348
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 104/345 (30%), Positives = 159/345 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET--SLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N + SL ++ + + E G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D+ L ++F +F V+H A V ++Q P Y N+ G + LLE K+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK-AGEAIAHAYNHIYGLSITGL 256
+ +V++SS++VYG + +P E T + Y +K E I + L
Sbjct: 125 KN-LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLL 183
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFT 301
R+F G P G P+ + ++ I R + + V Y+ DG V RD+
Sbjct: 184 RYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV-RDYI 242
Query: 302 YIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA 361
++ D+ KG +A L RI+NLG T V ++V +EK K
Sbjct: 243 HVVDLAKGHIAAL----------RKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292
Query: 362 ETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV+ R GDV +AN SLAQ ELG+ L+ + RW
Sbjct: 293 PYKVVAR-REGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRW 336
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 92/344 (26%), Positives = 166/344 (48%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL-LER-AGVFVIDA 138
T L+TG AGF+GS++ L V+GLDNF ++ + + + + E+ + +
Sbjct: 17 TWLITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKG 76
Query: 139 DINDKSLLDKIFNVV--AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
DI + +++H AA V ++ +P +NI GF+ +L K +
Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 197 PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGL 256
+ + V+A+SSS YG + +P E D +P S YA TK E A ++ YGL+ TGL
Sbjct: 137 VK-SFVYAASSSTYGDHPALPKVE-DAIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGL 194
Query: 257 RFFTVYGPWGRPDMAYFF----FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
R+F V+G PD AY +T +I + + + DG + +RDF ++++ V+ +
Sbjct: 195 RYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLING--DGET-SRDFCFVENAVQANIL 251
Query: 313 GLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA-ETKVLPLP-- 369
TA + +++N+ ++ L + L+ L+ + + P
Sbjct: 252 AA-TANDA----------GKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQD 300
Query: 370 -RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412
R GDV+ + A+IS A+ +G+ P ++ G+ K + WY+ + N
Sbjct: 301 FRAGDVRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIKFLN 344
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
Identities = 92/344 (26%), Positives = 166/344 (48%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL-LER-AGVFVIDA 138
T L+TG AGF+GS++ L V+GLDNF ++ + + + + E+ + +
Sbjct: 17 TWLITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKG 76
Query: 139 DINDKSLLDKIFNVV--AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
DI + +++H AA V ++ +P +NI GF+ +L K +
Sbjct: 77 DIRQLEDCQTALSHYKSGVDYILHQAALGSVPRSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 197 PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGL 256
+ + V+A+SSS YG + +P E D +P S YA TK E A ++ YGL+ TGL
Sbjct: 137 VK-SFVYAASSSTYGDHPALPKVE-DAIGKPLSPYAVTKYVNELYADVFHKTYGLNCTGL 194
Query: 257 RFFTVYGPWGRPDMAYFF----FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
R+F V+G PD AY +T +I + + + DG + +RDF ++++ V+ +
Sbjct: 195 RYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLING--DGET-SRDFCFVENAVQANIL 251
Query: 313 GLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA-ETKVLPLP-- 369
TA + +++N+ ++ L + L+ L+ + + P
Sbjct: 252 AA-TANDA----------GKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQD 300
Query: 370 -RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412
R GDV+ + A+IS A+ +G+ P ++ G+ K + WY+ + N
Sbjct: 301 FRAGDVRHSQADISKAKSLIGFEPEFKIQQGIDKAMPWYIKFLN 344
>UNIPROTKB|I3LL84 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 EMBL:FP475977 RefSeq:XP_003356250.1
Ensembl:ENSSSCT00000028713 GeneID:100621392 KEGG:ssc:100621392
Uniprot:I3LL84
Length = 348
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 102/345 (29%), Positives = 159/345 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE--TSLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N +S+ ++ + + E G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGGSSMPESLRRVQELTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D++ L ++F F V+H A V ++Q P Y N+ G + LLE K+
Sbjct: 65 MDILDQAALQRLFKKYHFVAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK-AGEAIAHAYNHIYGLSITGL 256
+ +V++SS++VYG + +P E T + Y +K E I + L
Sbjct: 125 KN-LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVLL 183
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFT 301
R+F G P G P+ + ++ I R + + V Y+ DG V RD+
Sbjct: 184 RYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV-RDYI 242
Query: 302 YIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA 361
++ D+ KG +A L RI+NLG T V ++V +EK K
Sbjct: 243 HVVDLAKGHIAAL----------RKLKEQCGCRIYNLGTGTGYSVLQMVRAMEKASGKKI 292
Query: 362 ETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV+ R GDV +AN SLA +ELG+ L+ + RW
Sbjct: 293 PYKVVAR-REGDVAACYANPSLALKELGWTAALGLDRMCEDLWRW 336
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 80/234 (34%), Positives = 121/234 (51%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
VLVTG GF+GSH+ AL +G V +DN +N +LK ++ LE +I+ ++
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSLENLKCGQRDKLE-----IINGNLT 58
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
DK LLD V V HLAA A V+ + ++ +E+N NLLE + + +
Sbjct: 59 DKFLLDSA--VKGCETVFHLAAHANVQNSAKDTGIDLENNTLATHNLLEAMRRNRVD-RL 115
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTV 261
V+ASS++VYG + E P SLY A+K AGE + AY+H+YGL T RF +
Sbjct: 116 VFASSAAVYGESGLTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFANI 175
Query: 262 YGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315
G + Y F +R +R ++ DG S ++ + ++ D V G L G +
Sbjct: 176 VGSRRHSGVIYDFVSR--LRQNPSSLLVLGDG-SQSKPYLHVSDCVAGMLLGFE 226
>UNIPROTKB|Q4QRB0 [details] [associations]
symbol:Gale "Gale protein" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784 EMBL:CH473968
GeneTree:ENSGT00530000063128 CTD:2582 HOVERGEN:HBG001396
UniGene:Rn.29908 EMBL:BC097293 IPI:IPI00882523 RefSeq:NP_542961.2
SMR:Q4QRB0 STRING:Q4QRB0 Ensembl:ENSRNOT00000013322 GeneID:114860
KEGG:rno:114860 InParanoid:Q4QRB0 NextBio:618919
Genevestigator:Q4QRB0 Uniprot:Q4QRB0
Length = 348
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 102/345 (29%), Positives = 157/345 (45%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--ETSLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N E S+ ++ + + E G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D++ L +F F V+H A V ++Q P Y N+ G + LLE ++
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK-AGEAIAHAYNHIYGLSITGL 256
+ ++V++SS++VYG + +P E T + Y +K E I + L
Sbjct: 125 K-SLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIQDLCRADTAWNAVLL 183
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFT 301
R+F G P G P+ + ++ I R + + V Y DG V RD+
Sbjct: 184 RYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGV-RDYI 242
Query: 302 YIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA 361
++ D+ KG +A L RI+NLG T V ++V +EK K
Sbjct: 243 HVVDLAKGHIAALKKLKEQ----------CGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292
Query: 362 ETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV+ R GDV +AN SLA ELG+ L+ + RW
Sbjct: 293 PYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 336
>UNIPROTKB|F1PI88 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
EMBL:AAEX03001747 RefSeq:XP_003638951.1 ProteinModelPortal:F1PI88
Ensembl:ENSCAFT00000020920 GeneID:100855555 KEGG:cfa:100855555
Uniprot:F1PI88
Length = 348
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 101/346 (29%), Positives = 162/346 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--ETSLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N + S+ ++ + + E G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGKGSMPESLQRVQELTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D++ L ++F +FT V+H A V ++Q P Y N+ G + LLE ++
Sbjct: 65 MDILDQAALQRLFEKHSFTAVIHFAGLKAVGESVQKPLDYYRVNLTGSIQLLEIMRAHGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK-AGEAIAHAYNHIYGLSITGL 256
+ +V++SS++VYG + +P E T + Y +K E I + L
Sbjct: 125 KN-LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKYFIEEMIRDLCQADKAWNAVLL 183
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITV----YEAPDGASVARDF 300
R+F G P G P+ + ++ I G+R + V Y+ DG V RD+
Sbjct: 184 RYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAI-GRREVLNVFGNDYDTEDGTGV-RDY 241
Query: 301 TYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360
++ D+ KG +A L RI+NLG T V ++V ++K +
Sbjct: 242 IHVVDLAKGHIAAL----------RKLKEQCGCRIYNLGTGTGYSVLQMVEAMKKASGQE 291
Query: 361 AETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV+ R GDV +AN SLA +ELG+ L+ + RW
Sbjct: 292 IPYKVVAR-REGDVAACYANPSLALKELGWTAVLGLDRMCEDLWRW 336
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 102/360 (28%), Positives = 160/360 (44%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI-DAD 139
+VLVTG AG++GSH L L + G + +DN++N SL++ +K E D
Sbjct: 4 SVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVD 63
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
+ D+ L+KIF+ F V+H A V +++ P Y +NI G V LLE +
Sbjct: 64 LRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKN 123
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAH-AYNHIYGLSITGLRF 258
+V++SS++VYG K+VP +E+ + Y TK E I + I LR+
Sbjct: 124 -LVFSSSATVYGWPKEVPCTEESPISA-TNPYGRTKLFIEEICRDVHRSDSEWKIILLRY 181
Query: 259 FTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITV----YEAPDGASVARDFTY 302
F G P G P+ + + + G+R +TV Y+ DG V RD+ +
Sbjct: 182 FNPVGAHPSGYIGEDPLGVPNNL-MPYVQQVAVGRRPHLTVFGTDYKTKDGTGV-RDYIH 239
Query: 303 IDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ G +A L ++NLG V +V+ EK K
Sbjct: 240 VMDLADGHIAAL---------RKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKIP 290
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLS--Y-YNSASASPS 419
V+ R GD + +A+ A+REL + +E + W + Y YNS+S S
Sbjct: 291 L-VMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNPYGYNSSSNGSS 349
>UNIPROTKB|Q3T105 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA CTD:2582
HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:DAAA02006426
EMBL:BC102185 IPI:IPI00686007 RefSeq:NP_001193137.1
UniGene:Bt.12474 SMR:Q3T105 STRING:Q3T105
Ensembl:ENSBTAT00000006586 GeneID:523154 KEGG:bta:523154
InParanoid:Q3T105 NextBio:20873677 Uniprot:Q3T105
Length = 348
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 101/346 (29%), Positives = 160/346 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET--SLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N S+ ++ + + + G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPMVIDNFHNAIRGGGSMPESLRRVQDLTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D++ L ++F +F V+H A V ++Q P Y N+ G + LLE ++
Sbjct: 65 MDILDQAALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK-AGEAIAHAYNHIYGLSITGL 256
+ +V++SS++VYG + +P E T + Y +K E I + L
Sbjct: 125 KN-LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKAWNAVLL 183
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITV----YEAPDGASVARDF 300
R+F G P G P+ + ++ I G+R + V Y+ DG V RD+
Sbjct: 184 RYFNPIGAHASGCIGEDPQGIPNNLMPYVSQVAI-GRREVLNVFGNDYDTEDGTGV-RDY 241
Query: 301 TYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360
++ D+ KG +A L RI+NLG T V ++V +EK K
Sbjct: 242 IHVVDLAKGHIAAL----------RKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291
Query: 361 AETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV+ R GDV +AN SLA +ELG+ L+ + RW
Sbjct: 292 IPYKVVAR-REGDVAACYANPSLALKELGWSAALGLDRMCEDLWRW 336
>MGI|MGI:1921496 [details] [associations]
symbol:Gale "galactose-4-epimerase, UDP" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISO;IDA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IDA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0019388
"galactose catabolic process" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 MGI:MGI:1921496 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
GO:GO:0019388 KO:K01784 GeneTree:ENSGT00530000063128 OMA:ADKAWNA
CTD:2582 HOVERGEN:HBG001396 OrthoDB:EOG4B5P5D EMBL:BC027438
IPI:IPI00153129 RefSeq:NP_848476.1 UniGene:Mm.247946
ProteinModelPortal:Q8R059 SMR:Q8R059 STRING:Q8R059
PhosphoSite:Q8R059 PaxDb:Q8R059 PRIDE:Q8R059
Ensembl:ENSMUST00000102540 Ensembl:ENSMUST00000102541 GeneID:74246
KEGG:mmu:74246 InParanoid:Q8R059 ChiTaRS:GALE NextBio:340230
Bgee:Q8R059 CleanEx:MM_GALE Genevestigator:Q8R059
GermOnline:ENSMUSG00000028671 Uniprot:Q8R059
Length = 347
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 101/345 (29%), Positives = 156/345 (45%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--ETSLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N E S+ ++ + + E G V +
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFEE 63
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D++ L +F +F V+H A V ++Q P Y N+ G + LLE ++
Sbjct: 64 MDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHGV 123
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK-AGEAIAHAYNHIYGLSITGL 256
+ +V++SS++VYG + +P E T + Y +K E I + L
Sbjct: 124 KN-LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAVLL 182
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFT 301
R+F G P G P+ + ++ I R + + V Y DG V RD+
Sbjct: 183 RYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGV-RDYI 241
Query: 302 YIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA 361
++ D+ KG +A L R +NLG T V ++V +EK K
Sbjct: 242 HVVDLAKGHIAALKKLKEQ----------CGCRTYNLGTGTGYSVLQMVQAMEKASGKKI 291
Query: 362 ETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV+ R GDV +AN SLA ELG+ L+ + RW
Sbjct: 292 PYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>UNIPROTKB|F1NWE5 [details] [associations]
symbol:GALE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0019388 "galactose catabolic process"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 GO:GO:0019388
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AADN02043722
EMBL:AADN02043721 IPI:IPI00604262 Ensembl:ENSGALT00000006441
Uniprot:F1NWE5
Length = 351
Score = 267 (99.0 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 97/349 (27%), Positives = 159/349 (45%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE------TSLKKARKGLLERAGVFV 135
+LVTG AG++GSH L L + G + +DN N SL++ ++ + + +
Sbjct: 9 ILVTGGAGYIGSHCVLQLAEAGYEPVVIDNLRNAARGPGALPESLQRVQR--IAQTPIAF 66
Query: 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
+ DI D + L K+F+ F+ VMH A V +++ P Y N+ G + LLE ++
Sbjct: 67 QELDITDGAALRKLFSTHRFSGVMHFAGLKAVGESVRRPLEYYNVNLTGTIRLLEAMEAY 126
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK-AGEAIAHAYNHIYGLSIT 254
+ IV++SS++VYG + +P EK + Y +K E I G +
Sbjct: 127 SVRN-IVFSSSATVYGDPQYLPLDEKHPVGGCTNPYGKSKYFIEEMIQDLCKAEKGWNAI 185
Query: 255 GLRFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARD 299
LR+F G P G P+ + + + R + ++V YE DG + RD
Sbjct: 186 LLRYFNPIGAHESGMIGEDPQGIPNNLMPYVAQVAVGRQEFLSVFGNDYETADGTGI-RD 244
Query: 300 FTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKV 359
+ ++ D+ KG +A L +I+NLG T V ++V +EK
Sbjct: 245 YIHVVDLAKGHIAALKKLKEN----------CGCKIYNLGTGTGYSVLQMVQAMEKASGR 294
Query: 360 KAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL 408
+ + K+ R GDV +AN LA+RELG+ L+ + RW L
Sbjct: 295 EIKYKITGR-REGDVAACYANPELAERELGWKAAFGLDKMCEDLWRWQL 342
>RGD|621493 [details] [associations]
symbol:Gale "UDP-galactose-4-epimerase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA;ISO]
[GO:0006012 "galactose metabolic process" evidence=IEA;ISO]
[GO:0019388 "galactose catabolic process" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 RGD:621493 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 GO:GO:0019388 HOVERGEN:HBG001396
OrthoDB:EOG4B5P5D EMBL:X53949 IPI:IPI00193573 PIR:S11223
UniGene:Rn.29908 ProteinModelPortal:P18645 SMR:P18645 STRING:P18645
PRIDE:P18645 InParanoid:P18645 ArrayExpress:P18645
Genevestigator:P18645 GermOnline:ENSRNOG00000009712 Uniprot:P18645
Length = 347
Score = 267 (99.0 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 103/346 (29%), Positives = 161/346 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--ETSLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N E S+ ++ + + E G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D++ L +F F V+H A V ++Q P Y N+ G + LLE ++
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAMGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL-YAATKKAGEAIAH-------AYNHI- 248
+ ++V++SS++VYG K VP S + + + Y +K E + A+N +
Sbjct: 125 K-SLVFSSSATVYG--KPVPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRADTAWNAVL 181
Query: 249 --YGLSITGLRFFTV-YGPWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDF 300
Y + I R + P G P+ + ++ I R + + V Y DG V RD+
Sbjct: 182 LRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAIGRREALNVFGDDYATEDGTGV-RDY 240
Query: 301 TYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360
++ D+ KG +A L RI+NLG T V ++V +EK K
Sbjct: 241 IHVVDLAKGHIAALKKLKEQ----------CGCRIYNLGTGTGYSVLQMVQAMEKASGKK 290
Query: 361 AETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV+ R GDV +AN SLA ELG+ L+ + RW
Sbjct: 291 IPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 234 (87.4 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 84/276 (30%), Positives = 128/276 (46%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLK-KARKGLLERAGVFVIDADIN 141
+VTG AGF+GSH+ L G V +DN + +L+ +A L F I DI
Sbjct: 7 IVTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRNLEHRANNPDL----TFEIK-DIC 61
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
+ S +F V + V H A + +++NP Y+++N+ G V +LE ++++ + +
Sbjct: 62 ELSAPHPLFENVDY--VFHFAGIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKK-L 118
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTV 261
V+A+SSS YG+ VP E D P YA +K GE A + +YGL + +R F
Sbjct: 119 VYAASSSCYGL-ADVPTRE-DHPIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIFNA 176
Query: 262 YGPWGRPDMAY--FF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317
YG R Y F F + + K TV DG RDF Y+ D+ + L +T
Sbjct: 177 YGTRVRTTGVYGAVFGVFFKQKLADKPFTV--VGDGTQ-RRDFLYVTDVARAFLKAAETR 233
Query: 318 XXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLL 353
+NLG P ++RLV L+
Sbjct: 234 KVGET-------------WNLGAGNPQSINRLVELI 256
Score = 80 (33.2 bits), Expect = 5.5e-23, Sum P(2) = 5.5e-23
Identities = 22/69 (31%), Positives = 36/69 (52%)
Query: 336 FNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTD 395
+NLG P ++RLV L + E + +P R G+ T A+IS +R+LG+ PT
Sbjct: 239 WNLGAGNPQSINRLVEL------IGGEVEYIP-KRPGEPDCTWADISKIKRDLGWEPTIT 291
Query: 396 LETGLKKFV 404
G+ + +
Sbjct: 292 FADGVSRMM 300
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 259 (96.2 bits), Expect = 3.8e-22, P = 3.8e-22
Identities = 93/351 (26%), Positives = 161/351 (45%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +LVTG AGF+GS + L ++ + V+ L NF+ S ++ G+ + + AD
Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVV-L-NFDKLTYASHPESLAGVADNERYHFVQAD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS----- 194
I D++ L+++ +MHLAA++ V ++ P ++++NI G LLE C+S
Sbjct: 59 ICDRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQTNIVGTYTLLEACRSYYQTL 118
Query: 195 SDPQPA---IVWASSSSVYG-VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYG 250
Q + S+ V+G + + FSE D P+S Y+A+K + + + A++ Y
Sbjct: 119 GQAQQRRFRLHHISTDEVFGSLTETGLFSETSAYD-PSSPYSASKASADHLVRAWHRTYA 177
Query: 251 LSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310
L I YGP+ P+ + ++ K + +Y +G V RD+ Y+DD VK
Sbjct: 178 LPIVITNCSNNYGPFQYPEKLIPLMVSNALQSKPLPIYG--NGQQV-RDWLYVDDHVKAL 234
Query: 311 LAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP--- 367
L E T V + SLLE+++ ++ +
Sbjct: 235 Y--LVATQGQLGQTYNIGGSCE-------QTNLTVVRHICSLLEELVPTHPQSLAMGNAG 285
Query: 368 --------LPRNG-DVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLS 409
+ R G DV++ + S QRELG+ P E+GL+K V W ++
Sbjct: 286 FADLIQYVVDRPGHDVRYA-IDASKIQRELGWRPQESFESGLRKTVEWIIN 335
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 257 (95.5 bits), Expect = 1.3e-21, P = 1.3e-21
Identities = 101/359 (28%), Positives = 156/359 (43%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI-DADI 140
VLV+G AG++GSH L L G V+ +DN +N SL++ +K E D+
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDL 65
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
D+S L+KIF+ F V+H A V +++ P Y +N+ G + LLE +
Sbjct: 66 RDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN- 124
Query: 201 IVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAH-AYNHIYGLSITGLRFF 259
+V++SS++VYG K+VP +E+ + Y TK E I Y I LR+F
Sbjct: 125 LVFSSSATVYGSPKEVPCTEEFPISA-LNPYGRTKLFIEEICRDVYGSDPEWKIILLRYF 183
Query: 260 TVYG----------PWGRPDMAYFFFTRDIIRGKR--ITV----YEAPDGASVARDFTYI 303
G P G P+ F + + G+R +TV Y DG V RD+ ++
Sbjct: 184 NPVGAHPSGDIGEDPRGIPNNL-MPFVQQVAVGRRPHLTVFGNDYNTKDGTGV-RDYIHV 241
Query: 304 DDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363
D+ G +A L ++NLG V +V EK K
Sbjct: 242 IDLADGHIAALRKLEDCKIGC---------EVYNLGTGNGTSVLEMVDAFEKASGKKIPL 292
Query: 364 KVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLS--Y-YNSASASPS 419
V+ R GD + +A+ A+ EL + +E + W + Y Y+S+S S
Sbjct: 293 -VIAGRRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYGYDSSSEDNS 350
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 248 (92.4 bits), Expect = 7.3e-21, P = 7.3e-21
Identities = 95/338 (28%), Positives = 153/338 (45%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNF----NNYYETSLKKARKGLLERAGVFVIDA 138
L+TG AGF+GSH++ L RG V +DNF N Y++ +K+ R VI
Sbjct: 6 LITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIR----------VIPI 55
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+ DK+ + ++ N V HLAA GV+ M+ +E+N G N+L+ +
Sbjct: 56 SVLDKNSIYELVN--QHDVVFHLAAILGVKTTMEKSIELIETNFDGTRNILQAALKGKKK 113
Query: 199 PAIVWASSSSVYGVNKKVPFSEK-DR----TDQPASLYAATKKAGEAIAHAYNHIYGLSI 253
+V+AS+S VYG K PFSE+ DR T + YA K E + Y + GL +
Sbjct: 114 --VVFASTSEVYG-KAKPPFSEEGDRLYGATSKIRWSYAICKTLEETLCLGYA-LEGLPV 169
Query: 254 TGLRFFTVYGPWGRPDMAYFF----FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKG 309
T +R+F +YGP + D Y F ++G+ I VY DG R FTY+ D V+
Sbjct: 170 TIVRYFNIYGPRAK-DGPYAGVIPRFISAALQGEDILVYG--DGEQT-RCFTYVSDAVEA 225
Query: 310 CLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP 369
+ +D + V + +L KI++V E +V P
Sbjct: 226 TIRAMDEKVNGEIINIGSENEKSIK-----EVAEV-IKKLTDSSSKIVQVPFE-EVYPHG 278
Query: 370 RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWY 407
++ +++ + + + E GLK+ ++W+
Sbjct: 279 FE-EIPNRRPDVTKLKDLVQFQAKVTWEDGLKETIKWF 315
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 246 (91.7 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 74/237 (31%), Positives = 121/237 (51%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADI 140
+LVTGA GF+GSH+ +L K+G V L +N++ + L+K+ L+ + V+ D+
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLEKSP--FLK--DMEVVSGDL 59
Query: 141 NDKSLLDKIF-NVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
D +KI N+ A + HL A + Y+ P SYV++N+ G +N+LE K ++
Sbjct: 60 RDSFFCEKITKNIDA---IFHLGALIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISH 116
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
+ S+S VYG VP EK QP S Y+A+K A + +A +Y + + L++ R F
Sbjct: 117 -FIHTSTSEVYGTAFYVPIDEKHPL-QPQSPYSASKIAADMMALSYYNSFNLNVNIARPF 174
Query: 260 TVYGPWGRPDMAYFFFTRDIIRG-KRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315
YGP I+ G K I + + S RD ++ D +G ++ L+
Sbjct: 175 NTYGPRQSARAIIPTIITQILSGAKEIKLGDL----SPKRDLNFVLDTCEGFISLLN 227
>TAIR|locus:2204639 [details] [associations]
symbol:MUR4 "MURUS 4" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISM;IDA] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019567 "arabinose biosynthetic process" evidence=IMP]
[GO:0050373 "UDP-arabinose 4-epimerase activity" evidence=IDA]
[GO:0009723 "response to ethylene stimulus" evidence=RCA]
[GO:0009738 "abscisic acid mediated signaling pathway"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] [GO:0052542 "defense response by callose deposition"
evidence=RCA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
GO:GO:0045227 GO:GO:0009832 EMBL:AY195742 EMBL:AF083751
EMBL:AC007060 EMBL:AY064973 EMBL:BT002614 EMBL:AF325108
EMBL:AK220800 IPI:IPI00521995 PIR:E86431 RefSeq:NP_001031118.1
RefSeq:NP_174350.2 UniGene:At.20201 ProteinModelPortal:Q9SA77
SMR:Q9SA77 STRING:Q9SA77 PaxDb:Q9SA77 PRIDE:Q9SA77
EnsemblPlants:AT1G30620.1 EnsemblPlants:AT1G30620.2 GeneID:839942
KEGG:ath:AT1G30620 TAIR:At1g30620 eggNOG:COG1087
HOGENOM:HOG000168001 InParanoid:Q9SA77 KO:K12448 OMA:SHPNGYN
PhylomeDB:Q9SA77 ProtClustDB:CLSN2686084
BioCyc:MetaCyc:AT1G30620-MONOMER Genevestigator:Q9SA77
GermOnline:AT1G30620 GO:GO:0050373 GO:GO:0003978 GO:GO:0019567
GO:GO:0006012 GO:GO:0033358 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Uniprot:Q9SA77
Length = 419
Score = 260 (96.6 bits), Expect = 1.9e-20, P = 1.9e-20
Identities = 104/366 (28%), Positives = 168/366 (45%)
Query: 75 RSTRGLT-VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGV 133
R G+T VLVTG AG++GSH +L L K V +DN + +++ ++ E +
Sbjct: 65 RHEPGVTHVLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQELFPEPGRL 124
Query: 134 FVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK 193
I AD+ D ++KIF AF VMH AA A V + Q P Y + + + +LET
Sbjct: 125 QFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMA 184
Query: 194 SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ-PASLYAATKKAGEAIAHAYNHIYGLS 252
+ + ++++S+ + YG +P +E+ T Q P + Y KK E I ++ ++
Sbjct: 185 AHGVK-TLIYSSTCATYGEPDIMPITEE--TPQVPINPYGKAKKMAEDIILDFSKNSDMA 241
Query: 253 ITGLRFFTVYG--PWGR------PDM--------AYFFFTRDIIRGKRI--TVYEAPDGA 294
+ LR+F V G P GR P++ A F R I+ G +I T Y+ DG
Sbjct: 242 VMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKGTDYKTADGT 301
Query: 295 SVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLE 354
V RD+ + D+V + L A P + I+N+G V V +
Sbjct: 302 CV-RDYIDVTDLVDAHVKALQKAK-----------PRKVGIYNVGTGKGSSVKEFVEACK 349
Query: 355 KILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFVRWYLSYYNS 413
K V+ + LP R GD +++ S ++EL + T+L+ L+ RW + N
Sbjct: 350 KATGVEIKIDYLPR-RAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAWRWQKLHRNG 408
Query: 414 ASASPS 419
+ S
Sbjct: 409 YGLTTS 414
>TAIR|locus:2010371 [details] [associations]
symbol:UGE1 "UDP-D-glucose/UDP-D-galactose 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0046983 "protein
dimerization activity" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0046369 "galactose biosynthetic process"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AC012187
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 EMBL:Z54214 EMBL:AF334724
EMBL:AY054207 EMBL:AY120709 EMBL:BT000032 IPI:IPI00533120
PIR:B86261 PIR:S62783 RefSeq:NP_172738.1 UniGene:At.20506
UniGene:At.27284 ProteinModelPortal:Q42605 SMR:Q42605 IntAct:Q42605
STRING:Q42605 PaxDb:Q42605 PRIDE:Q42605 EnsemblPlants:AT1G12780.1
GeneID:837834 KEGG:ath:AT1G12780 TAIR:At1g12780 InParanoid:Q42605
OMA:CEAILAD PhylomeDB:Q42605 ProtClustDB:PLN02240
BioCyc:ARA:AT1G12780-MONOMER BioCyc:MetaCyc:AT1G12780-MONOMER
Genevestigator:Q42605 GermOnline:AT1G12780 Uniprot:Q42605
Length = 351
Score = 252 (93.8 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 93/328 (28%), Positives = 155/328 (47%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL---LERAGVFVIDA 138
+LVTG AGF+G+H + L K G V +DNF+N ++ + R+ + L + F +
Sbjct: 9 ILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL-G 67
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ +K ++K+F+ F V+H A V +++NP Y ++N+ G +NL ET + +
Sbjct: 68 DLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYG-LSITGLR 257
+V++SS++VYG +K+P E D + + Y TK E IA I LR
Sbjct: 128 -MMVFSSSATVYGQPEKIPCME-DFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILLR 185
Query: 258 FFTVYG----------PWGRPDMAYFFFTRDII-RGKRITVY--EAP--DGASVARDFTY 302
+F G P G P+ + + + R + VY + P DG++V RD+ +
Sbjct: 186 YFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAV-RDYIH 244
Query: 303 IDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ G +A L +NLG V +V+ EK K
Sbjct: 245 VMDLADGHIAALRKLFADPKIGCTA--------YNLGTGQGTSVLEMVAAFEKASGKKIP 296
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGY 390
K+ P R+GD +A+ A++ELG+
Sbjct: 297 IKLCPR-RSGDATAVYASTEKAEKELGW 323
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 241 (89.9 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 86/342 (25%), Positives = 147/342 (42%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
++L+ G AG++GSH L G V+ +DN +E ++ + K + D+
Sbjct: 3 SILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITEGAK---------FYNGDL 53
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
DK+ L +F VMH AA + V +M+ P Y +N+ G + LLE
Sbjct: 54 RDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDK- 112
Query: 201 IVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFT 260
+++S+++ YG +E+ T+ P + Y TK A E + H Y+ L R+F
Sbjct: 113 FIFSSTAATYGEVDVDLITEETMTN-PTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFN 171
Query: 261 VYG--PWG------RPDMAYFFFTRDIIRGKRITV------YEAPDGASVARDFTYIDDI 306
V G P G RP+ + G+R + Y PDG + RD+ +++D+
Sbjct: 172 VAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCI-RDYIHVEDL 230
Query: 307 VKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVL 366
V GL E +NLGN V +V + ++ + +V
Sbjct: 231 VAAHFLGLKDLQNG----------GESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVA 280
Query: 367 PLPRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFVRWY 407
P R GD A+ A+ +LG+ P +++T ++ W+
Sbjct: 281 PR-RAGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWNWH 321
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 232 (86.7 bits), Expect = 4.9e-19, P = 4.9e-19
Identities = 67/231 (29%), Positives = 120/231 (51%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLLERAGVFVIDA 138
+ +LVTG AGF+GS + K D L + D Y L++ + + +R + A
Sbjct: 1 MKILVTGGAGFIGS--AFVRKYAYDHELIIVDKLT--YAGDLRRIEE-VRDRIKFY--KA 53
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ DK+ +++IF+ V+H AA++ V ++Q+P ++E+N+ G +L+ + +
Sbjct: 54 DVADKTAIEEIFDKEKPEAVVHFAAESHVDRSIQDPTPFIETNVKGTQVMLDASRKYGIE 113
Query: 199 PAIVWASSSSVYG-VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
V S+ VYG + K+ F+E+ +P S Y+ +K A + +A AY+ YGL + R
Sbjct: 114 K-FVHISTDEVYGELGKEGQFTEESPL-RPNSPYSVSKAAADMLARAYHRTYGLPVIVAR 171
Query: 258 FFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308
YGPW P+ + + + I VY G +V R++ Y+DD ++
Sbjct: 172 PCNNYGPWQYPEKLIPVVIKKALNNEPIPVYG--QGLNV-REWLYVDDCIE 219
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 235 (87.8 bits), Expect = 6.7e-19, P = 6.7e-19
Identities = 81/331 (24%), Positives = 151/331 (45%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDA 138
+ +LVTG AGF+GS+ + + + + NF+ Y +L K + + + +
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYE-TYKIINFDALTYSGNLNNV-KSIQDHPNYYFVKG 58
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+I + LL+ + +++ AA++ V +++NP + ++N+ G V LLE K P
Sbjct: 59 EIQNGELLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKY-PH 117
Query: 199 PAIVWASSSSVYG-VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+V S+ VYG + K F+E+ P S Y+++K + + IA AY Y L + R
Sbjct: 118 IKLVQVSTDEVYGSLGKTGRFTEETPL-APNSPYSSSKASADMIALAYYKTYQLPVIVTR 176
Query: 258 FFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317
YGP+ P+ + + GK++ +Y DG +V RD+ ++ D C A +D
Sbjct: 177 CSNNYGPYQYPEKLIPLMVTNALEGKKLPLYG--DGLNV-RDWLHVTD---HCSA-IDVV 229
Query: 318 XXXXXXXXXXXXPAEFRIFNLG-NTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQF 376
++N+G N V + ++ + K K + + + D ++
Sbjct: 230 LHKGRVG---------EVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRY 280
Query: 377 THANISLAQRELGYMPTTDLETGLKKFVRWY 407
N + E + P E GL++ V+WY
Sbjct: 281 A-INAEKMKNEFDWEPKYTFEQGLQETVQWY 310
>TAIR|locus:2015253 [details] [associations]
symbol:UGE3 "UDP-D-glucose/UDP-D-galactose 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IPI] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GO:GO:0009555 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:AY085887 EMBL:BT024882 EMBL:AK117913
IPI:IPI00534992 RefSeq:NP_564811.1 UniGene:At.36168
ProteinModelPortal:Q8LDN8 SMR:Q8LDN8 STRING:Q8LDN8 PRIDE:Q8LDN8
EnsemblPlants:AT1G63180.1 GeneID:842622 KEGG:ath:AT1G63180
TAIR:At1g63180 InParanoid:Q8LDN8 OMA:FWADASL PhylomeDB:Q8LDN8
Genevestigator:Q8LDN8 Uniprot:Q8LDN8
Length = 351
Score = 240 (89.5 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 93/330 (28%), Positives = 153/330 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL---LERAGVFVIDA 138
+LVTG AGF+G+H + L +G V +DN +N ++ + R+ + L F +
Sbjct: 9 ILVTGGAGFIGTHTVVQLLNQGFKVTIIDNLDNSVVEAVHRVRELVGPDLSTKLEFNL-G 67
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ +K ++K+F+ F V+H A V ++ NP Y ++N+ G +NL ET + +
Sbjct: 68 DLRNKGDIEKLFSNQRFDAVIHFAGLKAVGESVGNPRRYFDNNLVGTINLYETMAKYNCK 127
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIA---HAYNHIYGLSITG 255
+V++SS++VYG + VP E D Q + Y TK E IA HA + + +
Sbjct: 128 -MMVFSSSATVYGQPEIVPCVE-DFELQAMNPYGRTKLFLEEIARDIHAAEPEWKIIL-- 183
Query: 256 LRFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDF 300
LR+F G P G P+ + + + R + V Y DG++V RD+
Sbjct: 184 LRYFNPVGAHESGRIGEDPKGIPNNLMPYIQQVAVGRLPELNVFGHDYPTMDGSAV-RDY 242
Query: 301 TYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360
++ D+ G +A L+ +NLG V +VS EK K
Sbjct: 243 IHVMDLADGHVAALNKLFSDSKIGCTA--------YNLGTGQGTSVLEMVSSFEKASGKK 294
Query: 361 AETKVLPLPRNGDVQFTHANISLAQRELGY 390
K+ P R GD +A+ A++ELG+
Sbjct: 295 IPIKLCPR-RAGDATAVYASTQKAEKELGW 323
>TAIR|locus:2163401 [details] [associations]
symbol:DUR "DEFECTIVE UGE IN ROOT" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0006012 "galactose
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00797 UniPathway:UPA00963 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580 GO:GO:0045227
eggNOG:COG1087 HOGENOM:HOG000168001 KO:K12448
ProtClustDB:CLSN2686084 GO:GO:0050373 GO:GO:0003978 GO:GO:0006012
GO:GO:0033358 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AB017065 IPI:IPI00546765
RefSeq:NP_199261.1 UniGene:At.55356 ProteinModelPortal:Q9FI17
SMR:Q9FI17 STRING:Q9FI17 PaxDb:Q9FI17 PRIDE:Q9FI17
EnsemblPlants:AT5G44480.1 GeneID:834475 KEGG:ath:AT5G44480
TAIR:At5g44480 InParanoid:Q9FI17 OMA:VRWGPLE PhylomeDB:Q9FI17
Genevestigator:Q9FI17 GermOnline:AT5G44480 Uniprot:Q9FI17
Length = 436
Score = 244 (91.0 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 96/358 (26%), Positives = 164/358 (45%)
Query: 79 GLT-VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID 137
G+T VLVTG AG++GSH +L L + V +DN + ++K ++ + + I
Sbjct: 93 GVTHVLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIY 152
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
AD+ D ++KIF+ AF VMH AA A V + P Y + + + +LE
Sbjct: 153 ADLGDPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKV 212
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ ++++S+ + YG +K+P +E D P + Y KK E + ++ +++ LR
Sbjct: 213 KK-LIYSSTCATYGEPEKMPITE-DTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILR 270
Query: 258 FFTVYG--PWGR------PDM--------AYFFFTRDIIRGKRI--TVYEAPDGASVARD 299
+F V G P GR P++ A F R I G ++ T Y+ DG + RD
Sbjct: 271 YFNVIGSDPGGRLGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKTSDGTCI-RD 329
Query: 300 FTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKV 359
+ + D+V + L+ A P + I+N+G V V +K V
Sbjct: 330 YIDVTDLVDAHVKALEKAQ-----------PRKVGIYNVGTGKGRSVKEFVEACKKATGV 378
Query: 360 KAETKVLPLPRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFVRWYLSY---YNS 413
+ + LP R GD +++ + ++L + T+L+ L+ RW + YNS
Sbjct: 379 EIKVDFLPR-RPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRWQKIHPHGYNS 435
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 234 (87.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 92/348 (26%), Positives = 154/348 (44%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAG----VFV 135
+ VLVTG +G++GSH + L + G V+ LDN N K++ ++ER G FV
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNS-----KRSVLPVIERLGGKHPTFV 55
Query: 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
+ DI +++L+ +I + A V+H A V ++Q P Y ++N+ G + L+ +++
Sbjct: 56 -EGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA 114
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSIT 254
+ + +++SS++VYG K+P+ E T P S Y +K E I SI
Sbjct: 115 NVKN-FIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIA 173
Query: 255 GLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITV------YEAPDGASVAR 298
LR+F G P G P+ + + + G+R ++ Y DG V R
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAV-GRRDSLAIFGNDYPTEDGTGV-R 231
Query: 299 DFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILK 358
D+ ++ D+ G + ++ P I+NLG V +V+ K
Sbjct: 232 DYIHVMDLADGHVVAMEKLANK---------PG-VHIYNLGAGVGNSVLDVVNAFSKACG 281
Query: 359 VKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
P R GD+ A+ S A REL + T L+ + W
Sbjct: 282 KPVNYHFAPR-REGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 234 (87.4 bits), Expect = 5.8e-18, P = 5.8e-18
Identities = 90/356 (25%), Positives = 155/356 (43%)
Query: 80 LTVLVTGAAGFVGSH-VSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID- 137
+ +LVTG +GF+GS + + D V+ +D Y + R+ +E +V +
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLT--YAANQSALRE--VENNPRYVFEK 57
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS-- 195
DI D ++++ IF VMHLAA++ V ++ +V++NI G LLE K+
Sbjct: 58 VDICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWH 117
Query: 196 --DPQPAIVWA----SSSSVYG-VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI 248
D + S+ VYG ++ P + P+S Y+A+K A + A++
Sbjct: 118 TLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAWHRT 177
Query: 249 YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308
YGL + YG + + + + GK + +Y DG + RD+ +++D V+
Sbjct: 178 YGLPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIYG--DGQQI-RDWLFVEDHVQ 234
Query: 309 GCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKI-------LKVKA 361
L N T V R+ LLE++ +K
Sbjct: 235 ASYLVLTKGRVGENYNIGG---------NCEKTNLEVVKRICQLLEELAPSKPNHIKYYE 285
Query: 362 ETKVLPLPRNG-DVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSASA 416
+ R G DV+++ + S ELG+ P E GL++ V+WYL +NS+S+
Sbjct: 286 DLMTFVKDRPGHDVRYS-LDCSKIHAELGWQPQITFEQGLRQTVKWYL--FNSSSS 338
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 231 (86.4 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 90/338 (26%), Positives = 149/338 (44%)
Query: 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLLERAGVFVI 136
+G +LVTGA GF+GSH++ AL RG +N++ L LL+ VF
Sbjct: 4 KGKKILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFA- 62
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
DI D + + V+HLAA + Y+ +P++YV++N+ G +N+++ +
Sbjct: 63 -GDIRDPHGVREAMK--GCDVVLHLAALIAIPYSYHSPDTYVDTNVKGTLNVVQAARELG 119
Query: 197 PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGL 256
+V S+S VYG + VP +E+ Q S Y+A+K + IA ++ + + +
Sbjct: 120 VAK-VVHTSTSEVYGTARFVPITEEHPL-QGQSPYSASKIGADQIAMSFYSSFDTPVAII 177
Query: 257 RFFTVYGPWGRPDMAYFFFT--RDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGL 314
R F YGP R F T I G R A RD Y+ D V G +A
Sbjct: 178 RPFNTYGP--RQSARAFIPTVITQIASGARTLRLGA---LHPTRDLNYVADTVAGFIA-- 230
Query: 315 DTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDV 374
A + F I ++G T + + ++ +++ + + L P +V
Sbjct: 231 -VAESEKSVGEVINIGSNFEI-SMGETARM----IADVMGADVEIVTDAERLR-PDKSEV 283
Query: 375 QFTHANISLAQREL----GYMPTTDLETGLKKFVRWYL 408
+ A+ S A+R L Y L GL + V W++
Sbjct: 284 ERLWADTSKAKRLLDHGQNYGGKDGLRRGLVETVEWFV 321
>UNIPROTKB|P27830 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase 2" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=IDA] [GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;IDA] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;IDA] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 EMBL:M87049 OMA:RAYRQQM
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
eggNOG:COG1088 GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 PIR:G65182 RefSeq:YP_026255.1
RefSeq:YP_491651.1 PDB:1BXK PDBsum:1BXK ProteinModelPortal:P27830
SMR:P27830 PRIDE:P27830 EnsemblBacteria:EBESCT00000002573
EnsemblBacteria:EBESCT00000015511 GeneID:12933083 GeneID:948300
KEGG:ecj:Y75_p3387 KEGG:eco:b3788 PATRIC:32123069 EchoBASE:EB1422
EcoGene:EG11453 ProtClustDB:PRK10217
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT2-MONOMER
BioCyc:ECOL316407:JW5598-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT2-MONOMER EvolutionaryTrace:P27830
Genevestigator:P27830 Uniprot:P27830
Length = 355
Score = 232 (86.7 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 91/348 (26%), Positives = 154/348 (44%)
Query: 82 VLVTGAAGFVGSH-VSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID-AD 139
+L+TG AGF+GS V + + D V+ +D Y + A ER F + D
Sbjct: 4 ILITGGAGFIGSALVRYIINETSDAVVVVDKLT-YAGNLMSLAPVAQSER---FAFEKVD 59
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS----- 194
I D++ L ++F VMHLAA++ V ++ P +++E+NI G LLE ++
Sbjct: 60 ICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNAL 119
Query: 195 -SDPQPAIVW--ASSSSVYG-VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYG 250
D + A + S+ VYG ++ F + P+S Y+A+K + + + A+ YG
Sbjct: 120 TEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHLVRAWLRTYG 179
Query: 251 LSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310
L YGP+ P+ + + GK + VY +G + RD+ Y++D +
Sbjct: 180 LPTLITNCSNNYGPYHFPEKLIPLMILNALAGKSLPVYG--NGQQI-RDWLYVEDHARAL 236
Query: 311 LAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE-------- 362
T + NL V + LLE++ K
Sbjct: 237 YCVATTGKVGETYNIGGHNERK----NLD-----VVETICELLEELAPNKPHGVAHYRDL 287
Query: 363 -TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLS 409
T V P + D+++ + S RELG++P E+G++K V+WYL+
Sbjct: 288 ITFVADRPGH-DLRYA-IDASKIARELGWLPQETFESGMRKTVQWYLA 333
>TAIR|locus:2014235 [details] [associations]
symbol:RHD1 "ROOT HAIR DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=ISM] [GO:0006012 "galactose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0010053 "root epidermal cell differentiation" evidence=IMP]
[GO:0009832 "plant-type cell wall biogenesis" evidence=TAS]
[GO:0009969 "xyloglucan biosynthetic process" evidence=IMP]
[GO:0010246 "rhamnogalacturonan I biosynthetic process"
evidence=IMP] [GO:0010306 "rhamnogalacturonan II biosynthetic
process" evidence=IMP] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005795 GO:GO:0009832 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GO:GO:0010053 EMBL:AC066689 GO:GO:0009969 HSSP:Q14376
ProtClustDB:PLN02240 EMBL:BT011226 EMBL:BT012154 IPI:IPI00537209
RefSeq:NP_176625.1 UniGene:At.25758 ProteinModelPortal:Q9C7W7
SMR:Q9C7W7 STRING:Q9C7W7 PaxDb:Q9C7W7 PRIDE:Q9C7W7
EnsemblPlants:AT1G64440.1 GeneID:842752 KEGG:ath:AT1G64440
TAIR:At1g64440 InParanoid:Q9C7W7 OMA:HVAGYKY PhylomeDB:Q9C7W7
Genevestigator:Q9C7W7 Uniprot:Q9C7W7
Length = 348
Score = 231 (86.4 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 94/345 (27%), Positives = 147/345 (42%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAG--VFVIDAD 139
+LVTG AG++GSH L L G + +DN +N S+++ K L G + V D
Sbjct: 5 ILVTGGAGYIGSHTVLQLLLGGYNTVVIDNLDNSSLVSIQRV-KDLAGDHGQNLTVHQVD 63
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
+ DK L+K+F+ F VMH A V ++ P Y +N+ + LLE + +
Sbjct: 64 LRDKPALEKVFSETKFDAVMHFAGLKAVGESVAKPLLYYNNNLIATITLLEVMAAHGCKK 123
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNH-IYGLSITGLRF 258
+V++SS++VYG K+VP +E+ S Y TK E I I LR+
Sbjct: 124 -LVFSSSATVYGWPKEVPCTEESPLSG-MSPYGRTKLFIEDICRDVQRGDPEWRIIMLRY 181
Query: 259 FTVYG----------PWGRPDMAYFFFTRDIIRGK----RI--TVYEAPDGASVARDFTY 302
F G P G P+ + + ++ G+ +I T Y DG V RD+ +
Sbjct: 182 FNPVGAHPSGRIGEDPCGTPNNL-MPYVQQVVVGRLPNLKIYGTDYTTKDGTGV-RDYIH 239
Query: 303 IDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ G + L ++NLG V +V EK +K
Sbjct: 240 VVDLADGHICALQKLDDTEIGC---------EVYNLGTGKGTTVLEMVDAFEKASGMKIP 290
Query: 363 -TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV P GD + +A+ A+REL + +E + W
Sbjct: 291 LVKVGRRP--GDAETVYASTEKAERELNWKANFGIEEMCRDQWNW 333
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 227 (85.0 bits), Expect = 5.4e-17, P = 5.4e-17
Identities = 86/343 (25%), Positives = 153/343 (44%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ VLVTG +G++GSH + L + G V+ LDN N + L + L + FV + D
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIER-LSGKQPTFV-EGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I +++L+ +I + A V+H A V ++ P Y ++N+ G + L+ ++++ +
Sbjct: 59 IRNEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKN 118
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYG-LSITGLRF 258
+++SS++VYG K+P+ E T P S Y +K E I SI LR+
Sbjct: 119 -FIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIALLRY 177
Query: 259 FTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITVYE---APDGASVARDFTYI 303
F G P G P+ + + + G+R + ++ P+ A+ RD+ ++
Sbjct: 178 FNPVGAHPSGDMGEDPQGIPNNLIPYIAQVAV-GRRDSLAIFGNDYPPEDATAVRDYIHV 236
Query: 304 DDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363
D+ G +A + P I+NLG V +V+ K +
Sbjct: 237 MDLADGHVAAMQQLADK---------PG-VHIYNLGAGIGSSVLDVVNAFSKACGKPVKY 286
Query: 364 KVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
P R+GD+ A+ + A +EL + T L+ + W
Sbjct: 287 HFAPR-RDGDLPAYWADATKADKELNWRVTRTLDEMAQDTWHW 328
>TIGR_CMR|GSU_2366 [details] [associations]
symbol:GSU_2366 "dTDP-glucose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 HSSP:P26391 OMA:IQYVKDR RefSeq:NP_953413.1
ProteinModelPortal:Q74AI8 SMR:Q74AI8 GeneID:2686639
KEGG:gsu:GSU2366 PATRIC:22027581 ProtClustDB:CLSK828808
BioCyc:GSUL243231:GH27-2368-MONOMER Uniprot:Q74AI8
Length = 358
Score = 228 (85.3 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 94/343 (27%), Positives = 154/343 (44%)
Query: 82 VLVTGAAGFVGSH-VSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
VLVTG AGF+GS+ ++ L G V+ LD Y +L+ A FV D
Sbjct: 10 VLVTGGAGFIGSNFINHFLPANPGCRVINLDILT--YAGNLRNLTAVEQNPAYRFV-KGD 66
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D L+ +I V+H AA++ V ++ P +V +N+ G LLE +
Sbjct: 67 IGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESRRHWESG 126
Query: 200 AI-----VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSIT 254
AI + S+ VYG + + ++ P S Y+A+K + + AYN +GL +
Sbjct: 127 AIERFRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNETFGLPVL 186
Query: 255 GLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGL 314
R YGP+ P+ +I+ GK + VY DG +V RD+ ++ D +
Sbjct: 187 TTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYG--DGRNV-RDWLHVKDHS----TAI 239
Query: 315 DTAXXXXXXXXXXXXPAEFRIFNLGNTTP---VPVSRLV-SLL-EKILKVKAETKVLPL- 368
+T P E +FN+G + + L+ LL E++ + E++ L
Sbjct: 240 ETVLKGGK-------PGE--VFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLITF 290
Query: 369 --PRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLS 409
R G + + + +RELG+ P+ E G+ + V WYL+
Sbjct: 291 VKDRLGHDRRYAISAAKIKRELGWEPSYTFERGIAETVDWYLA 333
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 233 (87.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 96/344 (27%), Positives = 154/344 (44%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+LVTG AG++GSH + L G V+ +DN +N ++ AR + + V D DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAV--ARIEFIVKQHVPFYDVDIR 63
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
+ L+K+F + V+H AA V + + P +Y ++N++G VNLLE CK++D + I
Sbjct: 64 NYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVK-TI 122
Query: 202 VWASSSSVYGV------NKKVPFSEKDRTDQPASLYAATKKAGEAIAH-AYNHIYGLSIT 254
V++SS++VYG N +P E D P + Y TK E+I YN +
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMD-PTNPYGRTKFIIESILKDIYNSDDAWKVA 181
Query: 255 GLRFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITVYEAPDGASVARDFTYI 303
LR+F G P G P+ + + I R ++++++ D S RD T I
Sbjct: 182 ILRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIF-GNDYNS--RDGTPI 238
Query: 304 DDIVKGC-LAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
D + LA A +R +NLG V + K++ +
Sbjct: 239 RDYIHVVDLAKGHIAALAYLKNLQSK--GLYREWNLGTGKGSTVFEVYHAFSKVVGRELP 296
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
+V+ R GDV A A +EL + ++ K +W
Sbjct: 297 HEVVGR-RAGDVLDLTAKPDRANKELQWKTELTIDDACKDLWKW 339
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 233 (87.1 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 96/344 (27%), Positives = 154/344 (44%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+LVTG AG++GSH + L G V+ +DN +N ++ AR + + V D DI
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAV--ARIEFIVKQHVPFYDVDIR 63
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
+ L+K+F + V+H AA V + + P +Y ++N++G VNLLE CK++D + I
Sbjct: 64 NYEQLNKVFQDYKISGVIHFAALKAVGESTKIPLAYYDNNVSGTVNLLEVCKANDVK-TI 122
Query: 202 VWASSSSVYGV------NKKVPFSEKDRTDQPASLYAATKKAGEAIAH-AYNHIYGLSIT 254
V++SS++VYG N +P E D P + Y TK E+I YN +
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMD-PTNPYGRTKFIIESILKDIYNSDDAWKVA 181
Query: 255 GLRFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITVYEAPDGASVARDFTYI 303
LR+F G P G P+ + + I R ++++++ D S RD T I
Sbjct: 182 ILRYFNPIGAHPSGLLGEDPLGIPNNLLPYLAQVAIGRREKLSIF-GNDYNS--RDGTPI 238
Query: 304 DDIVKGC-LAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
D + LA A +R +NLG V + K++ +
Sbjct: 239 RDYIHVVDLAKGHIAALAYLKNLQSK--GLYREWNLGTGKGSTVFEVYHAFSKVVGRELP 296
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
+V+ R GDV A A +EL + ++ K +W
Sbjct: 297 HEVVGR-RAGDVLDLTAKPDRANKELQWKTELTIDDACKDLWKW 339
>TIGR_CMR|CPS_2147 [details] [associations]
symbol:CPS_2147 "UDP-glucose 4-epimerase" species:167879
"Colwellia psychrerythraea 34H" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000083
GenomeReviews:CP000083_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_268872.1 ProteinModelPortal:Q482Z5 SMR:Q482Z5
STRING:Q482Z5 GeneID:3518989 KEGG:cps:CPS_2147 PATRIC:21467411
OMA:QTAMGIR BioCyc:CPSY167879:GI48-2217-MONOMER Uniprot:Q482Z5
Length = 340
Score = 224 (83.9 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 86/345 (24%), Positives = 155/345 (44%)
Query: 80 LTVLVTGAAGFVGSH--VSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID 137
+++L+TG G++GSH V L + ++ +DN +N T + + K + + F I
Sbjct: 1 MSLLITGGTGYIGSHTVVELLQSTKEQEIVIVDNLSNS-STKVLERIKQITNKTVTF-IK 58
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
AD+ D++ L+++FN V+H A V + + P +Y ++N++G + LL
Sbjct: 59 ADVCDENALEQVFNEHKIEAVIHFAGLKAVGESNEIPLAYYQNNVSGTITLLRVMAKYQV 118
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAY-NHIYGLSITGL 256
+ +V++SS++VYG N P +E T + Y TK E + SI L
Sbjct: 119 KN-LVFSSSATVYG-NNVSPLNETMATSA-TNPYGQTKLMVEHVLFDLAKSDASWSIACL 175
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFT 301
R+F G P G P+ + + + R +++ + Y+ DG V RD+
Sbjct: 176 RYFNPIGAHQSGLIGENPNGIPNNLLPYVAQVAVGRLEQLQIFGDDYDTQDGTGV-RDYI 234
Query: 302 YIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA 361
++ D+ +G + L++ + NLG V +V+ + I K
Sbjct: 235 HVVDLAQGHVKALESLGHAKGTVKGC------QAINLGTGNGTSVLEIVNTFKDISKQDI 288
Query: 362 ETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
+V+P R GD+ +A+ SLA L + DL ++ RW
Sbjct: 289 PYQVVPR-RAGDLATVYADASLANELLDWQAKLDLTAMIQDTWRW 332
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 225 (84.3 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 87/340 (25%), Positives = 153/340 (45%)
Query: 82 VLVTGAAGFVGSHVSL-ALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
+LVTG AGF+GS V ++ D V+ +D Y +L+ + + + DI
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLT--YAGNLESLTE-VADNPRYAFEQVDI 60
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS------ 194
D++ LD++F VMHLAA++ V ++ + ++++NI G NLLE ++
Sbjct: 61 CDRAELDRVFAQYRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYWQQMP 120
Query: 195 SDPQPAIVW--ASSSSVYG-VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
S+ A + S+ VYG + + P+S Y+A+K + + + A+ YGL
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311
YGP+ P+ + + GK + VY DG + RD+ +++D + L
Sbjct: 181 PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG--DGMQI-RDWLFVEDHARA-L 236
Query: 312 AGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPL--P 369
+ T + I + T + L EK V ++
Sbjct: 237 YQVVTEGVVGETYNIGGHNEKANI-EVVKTICALLEELAP--EKPAGVARYEDLITFVQD 293
Query: 370 RNG-DVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL 408
R G DV++ + + +R+LG++P E+GL+K V+WYL
Sbjct: 294 RPGHDVRYA-VDAAKIRRDLGWLPLETFESGLRKTVQWYL 332
>POMBASE|SPBC365.14c [details] [associations]
symbol:uge1 "UDP-glucose 4-epimerase Uge1" species:4896
"Schizosaccharomyces pombe" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=ISS] [GO:0042125 "protein galactosylation"
evidence=IMP] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
UniPathway:UPA00214 InterPro:IPR016040 PomBase:SPBC365.14c
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CU329671
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 HSSP:P04397 OrthoDB:EOG4NKG3T
GO:GO:0033499 GO:GO:0042125 OMA:ADKAWNA PIR:T40321
RefSeq:NP_596043.1 ProteinModelPortal:Q9Y7X5 SMR:Q9Y7X5
STRING:Q9Y7X5 PRIDE:Q9Y7X5 EnsemblFungi:SPBC365.14c.1
GeneID:2540938 KEGG:spo:SPBC365.14c NextBio:20802053 Uniprot:Q9Y7X5
Length = 355
Score = 225 (84.3 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 96/350 (27%), Positives = 155/350 (44%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
TVLVTG AG++GSH + L ++G V+ +DN N ++ + K L + +F D+
Sbjct: 8 TVLVTGGAGYIGSHTCVVLLEKGYDVVIVDNLCNSRVEAVHRIEK-LTGKKVIFH-QVDL 65
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
D+ LDK+F + V+H A V ++Q P SY ++NI+G +NL+E K + +
Sbjct: 66 LDEPALDKVFANQNISAVIHFAGLKAVGESVQVPLSYYKNNISGTINLIECMKKYNVRD- 124
Query: 201 IVWASSSSVYGVNKK----VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITG 255
V++SS++VYG + +P E + S Y TK E I + L+
Sbjct: 125 FVFSSSATVYGDPTRPGGTIPIPESCPREG-TSPYGRTKLFIENIIEDETKVNKSLNAAL 183
Query: 256 LRFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDF 300
LR+F G P G P+ + + + R + V Y DG + RD+
Sbjct: 184 LRYFNPGGAHPSGELGEDPLGIPNNLLPYIAQVAVGRLDHLNVFGDDYPTSDGTPI-RDY 242
Query: 301 TYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360
++ D+ + +A LD R +NLG+ T V ++++ K +
Sbjct: 243 IHVCDLAEAHVAALDYLRQHF---------VSCRPWNLGSGTGSTVFQVLNAFSKAVGRD 293
Query: 361 AETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410
KV P R GDV AN + A EL + + + RW Y
Sbjct: 294 LPYKVTPR-RAGDVVNLTANPTRANEELKWKTSRSIYEICVDTWRWQQKY 342
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 224 (83.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 90/359 (25%), Positives = 153/359 (42%)
Query: 69 VKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDG--VLGLDNFNNYYETSLKKARKG 126
V+ PR + L LVTG AGF+ SHV ++L + ++ LD + Y SLK
Sbjct: 14 VREEVPRFEKRL--LVTGGAGFIASHVVVSLVRNYPNYLIINLDKLD--YCASLKNLET- 68
Query: 127 LLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFV 186
+ E+ I DI + + ++F V+H AAQ V + + + N+ G
Sbjct: 69 VSEKENYKFIQGDICEPHFIKQLFETEKIDIVLHFAAQTHVDLSFWHALEFTYVNVYG-T 127
Query: 187 NLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYN 246
N+L V+ S+ VYG + F E P + YA++K A E +Y
Sbjct: 128 NVLVAAAHEANVEKFVYVSTDEVYGGSTDQEFDESS-PKCPTNPYASSKAAAECFVQSYW 186
Query: 247 HIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306
Y + R VYGP P+ F + + ++ ++ + G R+F Y D+
Sbjct: 187 ERYQFPVVITRSSNVYGPHQYPEKVIPKFISLLQQNRKCCIHGS--GLQ-RRNFLYATDV 243
Query: 307 VKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVS-LLEKILKVKAETK- 364
V+ L L P E I+N+G + + +L L+ I K +E++
Sbjct: 244 VEAFLTVLKEGK-----------PGE--IYNIGTNFEMSIVQLAKELIHLIKKTSSESEM 290
Query: 365 ------VLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL-SYYNSASA 416
V P N D+++ ++ + LG+ P + G+KK + WY +++N +A
Sbjct: 291 EHWMDYVKDRPTN-DLRYPMSSEKM--HNLGWRPKVPWKEGIKKTIEWYKENFHNWKNA 346
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 223 (83.6 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 90/346 (26%), Positives = 148/346 (42%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDG--VLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
VLVTG AGF+ SHV ++L + ++ LD + Y SLK + + I D
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLD--YCASLKNLEP-VSNKQNYKFIQGD 76
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D + ++F V+H AAQ V + + N+ G L+ T + +
Sbjct: 77 ICDSHFVKRLFESEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNTAYEARVEK 136
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
++ S+ VYG + F E QP + YA++K A E +Y Y + R
Sbjct: 137 -FIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 260 TVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXX 319
VYGP P+ F + ++ ++ + G R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHDRKCCIHGS--GLQ-RRNFLYAADVVEAFLTVLTKGE- 250
Query: 320 XXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK---AETK-----VLPLPRN 371
P E I+N+G + V +L L +++K +ET+ V P N
Sbjct: 251 ----------PGE--IYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHN 298
Query: 372 GDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL-SYYNSASA 416
D+++ + + LG+ P E G+KK V WY +++N +A
Sbjct: 299 -DMRYPMKSEKI--HSLGWKPKVPWEEGIKKTVEWYRENFHNWKNA 341
>UNIPROTKB|Q9KLH0 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 221 (82.9 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 94/336 (27%), Positives = 150/336 (44%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ VLVTG G++GSH + + + G + LDN N T L + K + R FV D
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQ-FV-QGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I DK+LL + V+H A V ++Q P Y ++N+ G + L+ + + +
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK- 117
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK-KAGEAIAHAYNHIYGLSITGLRF 258
++V++SS++VYG VP +E T + A+ Y +K E + SIT LR+
Sbjct: 118 SLVFSSSATVYGEPTSVPITESFPT-KAANPYGRSKLMVEECLTDFQKANPDWSITLLRY 176
Query: 259 FTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITV----YEAPDGASVARDFTY 302
F G P G P+ F T+ + G+R ++V Y DG V RD+ +
Sbjct: 177 FNPVGSHPSGELGEDPQGIPNNLMPFVTQVAV-GRREYLSVFGSDYPTKDGTGV-RDYIH 234
Query: 303 IDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ G +A L A I+NLG V +V E
Sbjct: 235 VMDLADGHIAALKKVGTC----------AGLHIYNLGTGKGYSVLDVVKAFETASGRTVP 284
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLET 398
K++ R GD+ A+ + A ++LG+ T +L T
Sbjct: 285 YKLVDR-RPGDIAEYWADPTKAAQDLGWKATRNLHT 319
>TIGR_CMR|VC_A0774 [details] [associations]
symbol:VC_A0774 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 HSSP:P09147 PIR:F82419
RefSeq:NP_233160.1 ProteinModelPortal:Q9KLH0 SMR:Q9KLH0
DNASU:2612322 GeneID:2612322 KEGG:vch:VCA0774 PATRIC:20086102
OMA:NIDIRNK ProtClustDB:CLSK869762 Uniprot:Q9KLH0
Length = 338
Score = 221 (82.9 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 94/336 (27%), Positives = 150/336 (44%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ VLVTG G++GSH + + + G + LDN N T L + K + R FV D
Sbjct: 1 MKVLVTGGMGYIGSHTCIQMIQAGMTPVILDNLYNSKVTVLDRIEKVIGVRPQ-FV-QGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I DK+LL + V+H A V ++Q P Y ++N+ G + L+ + + +
Sbjct: 59 IRDKALLVDLMQQHNIEAVVHFAGLKAVGESVQKPLEYYDNNVNGTLVLVAAMREAGVK- 117
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK-KAGEAIAHAYNHIYGLSITGLRF 258
++V++SS++VYG VP +E T + A+ Y +K E + SIT LR+
Sbjct: 118 SLVFSSSATVYGEPTSVPITESFPT-KAANPYGRSKLMVEECLTDFQKANPDWSITLLRY 176
Query: 259 FTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITV----YEAPDGASVARDFTY 302
F G P G P+ F T+ + G+R ++V Y DG V RD+ +
Sbjct: 177 FNPVGSHPSGELGEDPQGIPNNLMPFVTQVAV-GRREYLSVFGSDYPTKDGTGV-RDYIH 234
Query: 303 IDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ G +A L A I+NLG V +V E
Sbjct: 235 VMDLADGHIAALKKVGTC----------AGLHIYNLGTGKGYSVLDVVKAFETASGRTVP 284
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLET 398
K++ R GD+ A+ + A ++LG+ T +L T
Sbjct: 285 YKLVDR-RPGDIAEYWADPTKAAQDLGWKATRNLHT 319
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 222 (83.2 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 89/354 (25%), Positives = 151/354 (42%)
Query: 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDG--VLGLDNFNNYYETSLKKARKGLLERA 131
P ++ VLVTG AGF+ SHV ++L + ++ LD + Y SLK + ++
Sbjct: 12 PPNSFAKRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLD--YCASLKNLET-ISDKQ 68
Query: 132 GVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLET 191
I DI D + +F V+H AAQ V + + N+ G LL
Sbjct: 69 NYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLLSA 128
Query: 192 CKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
+ + ++ S+ VYG + F E QP + YA++K A E +Y Y
Sbjct: 129 AHEARVEK-FIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKF 186
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311
+ R VYGP P+ F + ++ ++ + G R+F Y D+V+ L
Sbjct: 187 PVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGS--GLQT-RNFLYATDVVEAFL 243
Query: 312 AGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVS-LLEKILKVKAETK------ 364
L P E I+N+G + V +L L++ I + K+E++
Sbjct: 244 TVLKKGK-----------PGE--IYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVD 290
Query: 365 -VLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL-SYYNSASA 416
V P N D+++ + + LG+ P + G+KK + WY +++N +A
Sbjct: 291 YVNDRPTN-DMRYPMKSEKI--HGLGWRPKVPWKEGIKKTIEWYRENFHNWKNA 341
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 222 (83.2 bits), Expect = 3.5e-16, P = 3.5e-16
Identities = 90/346 (26%), Positives = 148/346 (42%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDG--VLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
VLVTG AGF+ SHV ++L + ++ LD + Y SLK + + I D
Sbjct: 20 VLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLD--YCASLKNLEP-VSNKQNYKFIQGD 76
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D + +F V V+H AAQ V + + N+ G L+ + +
Sbjct: 77 ICDSHFVKLLFEVEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYGTHVLVNAAYEAGVEK 136
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
++ S+ VYG + F E QP + YA++K A E +Y Y + R
Sbjct: 137 -FIYVSTDEVYGGSLDQEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKFPVVITRSS 194
Query: 260 TVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXX 319
VYGP P+ F + ++ ++ + G R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGS--GLQ-RRNFLYAADVVEAFLTVLTKGE- 250
Query: 320 XXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKV---KAETK-----VLPLPRN 371
P E I+N+G + V +L L +++K ++ET+ V P N
Sbjct: 251 ----------PGE--IYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHN 298
Query: 372 GDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL-SYYNSASA 416
D+++ + + LG+ P E G+KK V WY +++N +A
Sbjct: 299 -DMRYPMKSEKI--HSLGWKPKVPWEEGIKKTVEWYRKNFHNWKNA 341
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 229 (85.7 bits), Expect = 3.8e-16, P = 3.8e-16
Identities = 85/332 (25%), Positives = 143/332 (43%)
Query: 82 VLVTGAAGFVGSHVSLAL-KKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+L+TGAAGF+ SHV+ L + D ++ LD + Y ++LK FV D
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLD--YCSNLKNLNPSKSSPNFKFV-KGD 65
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I L++ + +MH AAQ V + N + ++NI G LLE CK +
Sbjct: 66 IASADLVNYLLITEEIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ S+ VYG + Q P + Y+ATK E + AY YGL + R
Sbjct: 126 RFIHVSTDEVYGETDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
Query: 258 FFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317
VYGP P+ F + GK + ++ DG++V R + Y +D+ + L
Sbjct: 186 GNNVYGPNQFPEKLIPKFILLAMNGKPLPIHG--DGSNV-RSYLYCEDVAEAFEVVLHKG 242
Query: 318 XXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN--GDVQ 375
++N+G T V + + + K+ + ++ + + D +
Sbjct: 243 EVN-------------HVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQR 289
Query: 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWY 407
+ + L ++LG+ T+ E GL+K + WY
Sbjct: 290 YFLDDQKL--KKLGWCERTNWEEGLRKTMEWY 319
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 220 (82.5 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 87/340 (25%), Positives = 151/340 (44%)
Query: 82 VLVTGAAGFVGSHVSL-ALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
+LVTG AGF+GS V ++ D V+ LD Y +L+ + + DI
Sbjct: 4 ILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLT--YAGNLESLTD-IADNPRYAFEQVDI 60
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS------ 194
D++ LD++F VMHLAA++ V ++ + ++++NI G NLLE ++
Sbjct: 61 CDRAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQTNIVGTFNLLEAARAYRQQMP 120
Query: 195 SDPQPAIVW--ASSSSVYG-VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
S+ A + S+ VYG ++ + P+S Y+A+K + + + A+ YGL
Sbjct: 121 SEKHEAFRFHHISTDEVYGDLSGTDDLFTETAPYAPSSPYSASKASSDHLVRAWLRTYGL 180
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311
YGP+ P+ + + GK + VY DG + RD+ +++D + L
Sbjct: 181 PTIVTNCSNNYGPYHFPEKLIPLMILNALDGKPLPVYG--DGMQI-RDWLFVEDHARA-L 236
Query: 312 AGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPL--P 369
+ T + I + T + L EK V ++
Sbjct: 237 YQVVTEGVVGETYNIGGHNEKANI-EVVKTICALLEELAP--EKPAGVARYEDLITFVQD 293
Query: 370 RNG-DVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL 408
R G D ++ + + +R+LG+ P E+GL+K V+WYL
Sbjct: 294 RPGHDARYA-VDTAKIRRDLGWQPLETFESGLRKTVQWYL 332
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 198 (74.8 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 65/231 (28%), Positives = 119/231 (51%)
Query: 80 LTVLVTGAAGFVGSH-VSLALKK-RGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID 137
+ +LVTG AGF+G++ V LAL++ R + LD Y S +++ + +R + ++
Sbjct: 1 MRLLVTGGAGFIGANFVHLALREARTSSITVLDALT--YAGS-RESLAPVADR--IRLVQ 55
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D +L+ + V V+H AA+ V A+ +P ++ SN+ G +LE + +
Sbjct: 56 GDITDAALVGDL--VAESDAVVHFAAETHVDNALADPEPFLHSNVVGTYTILEAVRRHNV 113
Query: 198 QPAIVWASSSSVYG---VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSIT 254
+ + S+ VYG ++ F+E + P+S Y++TK A + + A+ YG+ T
Sbjct: 114 R--LHHVSTDEVYGDLELDNPARFNETTPYN-PSSPYSSTKAAADLLVRAWVRSYGVRAT 170
Query: 255 GLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305
YGP+ + +++ G+R +Y A GA+V RD+ ++DD
Sbjct: 171 ISNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGA--GANV-RDWIHVDD 218
Score = 59 (25.8 bits), Expect = 6.7e-16, Sum P(2) = 6.7e-16
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 382 SLAQRELGYMPT-TDLETGLKKFVRWY 407
S Q ELG+ P TD E GL + WY
Sbjct: 282 STLQDELGWAPKHTDFEAGLTDTIDWY 308
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 216 (81.1 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 89/342 (26%), Positives = 146/342 (42%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ VLVTG AG++GSHV L + G V+ DN + + +L ER ++ D
Sbjct: 1 MPVLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGFPDALVHG-----ER----LVTGD 51
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
++D + LD +F F+ V+H AA ++ P Y +N +NLL C +
Sbjct: 52 LSDTARLDALFVEYGFSTVLHFAASIIAPESVTAPLKYYGNNTRNTLNLLGACVKHGVE- 110
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
+++S+++VYG+ +E+ T P + Y +K E + +G+ LR+F
Sbjct: 111 RFIFSSTAAVYGIPDSGVAAEESAT-VPINPYGTSKLMSEWMLRDVCAAHGMRSVALRYF 169
Query: 260 TVYG--PWGR-----PDMAYFF-FTRDIIRGKRITV------YEAPDGASVARDFTYIDD 305
V G P R P+ + + G R V Y PDG + RD+ +++D
Sbjct: 170 NVAGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGI-RDYIHVED 228
Query: 306 IVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKV 365
+ LA L RI N+G + V ++ ++ ++ V +
Sbjct: 229 LASAHLAALSYLEKGGEST---------RI-NVGYGSGSSVREVIDMVRRVSGVHFLAEE 278
Query: 366 LPLPRNGDVQFTHANISLAQRELGYMPTTD-LETGLKKFVRW 406
P R GD A A+ LG+ P D LET + RW
Sbjct: 279 APR-RPGDPPSLVARADRARTLLGWTPRYDNLETIVADAWRW 319
>FB|FBgn0035147 [details] [associations]
symbol:Gale "UDP-galactose 4'-epimerase" species:7227
"Drosophila melanogaster" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS;IMP;NAS] [GO:0006012 "galactose metabolic
process" evidence=IMP;NAS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 EMBL:AE014296 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
GeneTree:ENSGT00530000063128 OMA:ADKAWNA EMBL:AY058582
RefSeq:NP_001246537.1 RefSeq:NP_612044.1 UniGene:Dm.4155
ProteinModelPortal:Q9W0P5 SMR:Q9W0P5 DIP:DIP-20343N IntAct:Q9W0P5
MINT:MINT-914196 STRING:Q9W0P5 PaxDb:Q9W0P5 PRIDE:Q9W0P5
EnsemblMetazoa:FBtr0072556 EnsemblMetazoa:FBtr0306917 GeneID:38076
KEGG:dme:Dmel_CG12030 UCSC:CG12030-RA CTD:2582 FlyBase:FBgn0035147
InParanoid:Q9W0P5 OrthoDB:EOG473N6Z PhylomeDB:Q9W0P5
GenomeRNAi:38076 NextBio:806870 Bgee:Q9W0P5 GermOnline:CG12030
Uniprot:Q9W0P5
Length = 350
Score = 217 (81.4 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 91/343 (26%), Positives = 144/343 (41%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLK--KARKGLLERAG--VFVI 136
TVLVTG AG++GSH L + G V+ +DN N Y + K +A + E G V
Sbjct: 5 TVLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY 64
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
DI D+ + +F V H AA V + + P Y +N+ G LLE ++
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTGTNVLLEAMADNN 124
Query: 197 PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAY-NHIYGLSITG 255
V++SS++VYG K +P +E+ T S Y TK E I ++
Sbjct: 125 VFK-FVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVS 183
Query: 256 LRFFTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITVYEAPDGASVARDFTYI 303
LR+F G P G P+ + + + G+R ++VY + D + D T +
Sbjct: 184 LRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQVAV-GRRPSLSVYGS-DFPT--HDGTGV 239
Query: 304 DDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363
D + + L F +NLG V +V EK K
Sbjct: 240 RDYIH--IVDLAEGHVKALDKLRNIAETGFFAYNLGTGVGYSVLDMVKAFEKASGKKVNY 297
Query: 364 KVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
++ R+GDV +A+ +LA ++LG+ ++ + RW
Sbjct: 298 TLVDR-RSGDVATCYADATLADKKLGWKAERGIDKMCEDTWRW 339
>TIGR_CMR|SO_1664 [details] [associations]
symbol:SO_1664 "UDP-glucose 4-epimerase" species:211586
"Shewanella oneidensis MR-1" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0005975 "carbohydrate metabolic
process" evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_717275.1 ProteinModelPortal:Q8EGE0
GeneID:1169457 KEGG:son:SO_1664 PATRIC:23522965 OMA:CGKSIAY
ProtClustDB:CLSK906369 Uniprot:Q8EGE0
Length = 337
Score = 215 (80.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 90/344 (26%), Positives = 146/344 (42%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+T+LVTG AG++G+H + L G V+ LDN +N +L + + + V D
Sbjct: 1 MTILVTGGAGYIGTHTVVELLNAGSEVIVLDNLSNSSIEALDRVER--ITGKSVTFYQGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I +K+LL K+F+ + V+H A V ++ P Y E+N+ G + L + +
Sbjct: 59 ILNKALLQKVFSDHSIDAVIHFAGLKAVGESVAKPLKYYENNVTGTLILCQVMAEFKVKN 118
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLRF 258
+V++SS++VYG +P +E D + Y +K E I +H +I LR+
Sbjct: 119 -LVFSSSATVYGDPASLPITE-DFPTGATNPYGQSKLMVEHILADLHHSDPSWNIARLRY 176
Query: 259 FTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITV----YEAPDGASVARDFTY 302
F G P P+ F + + GKR ++V Y DG V RD+ +
Sbjct: 177 FNPVGAHASGLIGEDPNDIPNNLMPFIAQVAV-GKREALSVFGNDYPTHDGTGV-RDYIH 234
Query: 303 IDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ G L L+ P +NLG V +V EK
Sbjct: 235 VVDLAIGHLKALEKLATK---------PG-LVTYNLGTGQGYSVLDMVKAFEKACGKSIA 284
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
+ P R GD+ +A+ A+ +L + T LE W
Sbjct: 285 YLIAPR-RPGDIAACYADPDHAKTDLDWQATHSLEDMANSSWHW 327
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 215 (80.7 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 87/349 (24%), Positives = 152/349 (43%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +L+TG AG++GSH + L ++ +DN +N SL + ++ + + F +
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKE-ITGKQFEFYKENV 59
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
+N + +++IF V+H A V + P +Y +NI + L + + + +
Sbjct: 60 LN-REKMNEIFLENNIEAVIHFAGFKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKN 118
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYG-LSITGLRF 258
+++SS++VYG+ K +P +E+ + Y TK E I SI LR+
Sbjct: 119 -FIFSSSATVYGIPKTLPITEEFPLSV-TNPYGQTKLMIEQIMRDVAKADDEWSIALLRY 176
Query: 259 FTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFTYI 303
F +G P G P+ + T+ + + K + + Y DG V RD+ ++
Sbjct: 177 FNPFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGV-RDYIHV 235
Query: 304 DDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363
D+ KG + L+ +NLG V +V EK+ K
Sbjct: 236 VDLAKGHVKALEKVLKTKG----------IEAYNLGTGKGYSVLEMVKAFEKVSGKKIPY 285
Query: 364 KVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412
KV+ R GDV A++S A+RELG+ LE RW ++ N
Sbjct: 286 KVIGR-RPGDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRWQVNNKN 333
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 215 (80.7 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 87/340 (25%), Positives = 151/340 (44%)
Query: 82 VLVTGAAGFVGSHVSL-ALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
+LVTG AGF+GS V ++ D V+ LD Y +L+ + + DI
Sbjct: 9 ILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLT--YAGNLESLTD-IADNPRYAFEQVDI 65
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS------ 194
D++ LD++F VMHLAA++ V A+ + ++ +NI G +LLE ++
Sbjct: 66 CDRAELDRVFAQYRPDAVMHLAAESHVDRAIGSAGEFIRTNIVGTFDLLEAARAYWQQMP 125
Query: 195 SDPQPAIVW--ASSSSVYG-VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
S+ + A + S+ VYG ++ + P+S Y+A+K A + + A+ Y L
Sbjct: 126 SEKREAFRFHHISTDEVYGDLHGTDDLFTETTPYAPSSPYSASKAAADHLVRAWQRTYRL 185
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311
YGP P+ + + GK + VY DGA + RD+ +++D + L
Sbjct: 186 PSIVSNCSNNYGPRQFPEKLIPLMILNALSGKPLPVYG--DGAQI-RDWLFVEDHARA-L 241
Query: 312 AGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPL--P 369
+ T + + + T + L EK V ++
Sbjct: 242 YQVVTEGVVGETYNIGGHNEKTNL-EVVKTICALLEELAP--EKPAGVARYEDLITFVQD 298
Query: 370 RNG-DVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL 408
R G D ++ + + +R+LG++P E+GL+K V+WYL
Sbjct: 299 RPGHDARYA-VDAAKIRRDLGWLPLETFESGLRKTVQWYL 337
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 209 (78.6 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 68/231 (29%), Positives = 104/231 (45%)
Query: 82 VLVTGAAGFVGSHVSLAL-KKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+L+TGAAGF+ SHV+ L + D ++ LD + Y + LK FV D
Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLD--YCSDLKNLDPSFSSPNFKFV-KGD 67
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I L++ + +MH AAQ V + N + ++NI G LLE CK +
Sbjct: 68 IASDDLVNYLLITENIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 127
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ S+ VYG + Q P + Y+ATK E + AY YGL + R
Sbjct: 128 RFIHVSTDEVYGETDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 187
Query: 258 FFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308
VYGP P+ F + GK + ++ DG++V R + Y +D+ +
Sbjct: 188 GNNVYGPNQFPEKMIPKFILLAMSGKPLPIHG--DGSNV-RSYLYCEDVAE 235
Score = 56 (24.8 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 386 RELGYMPTTDLETGLKKFVRWY 407
++LG+ T+ E GLKK + WY
Sbjct: 300 KKLGWQERTNWEDGLKKTMDWY 321
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 215 (80.7 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 68/238 (28%), Positives = 114/238 (47%)
Query: 82 VLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+L+TG AGF+GSH+++ L K+ ++ LD + Y +++ L E F +
Sbjct: 12 ILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLD--YCSNINNLGCVLKELNFKFY-KGN 68
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D LL+ IF V+HLAA V + + + E+NI G LLETCK+ +
Sbjct: 69 ILDSELLENIFEKEKIDIVIHLAAYTHVDNSFKQSIKFTENNILGTHYLLETCKNYKLKK 128
Query: 200 AIVWASSSSVYGV---------NKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIY 249
++ S+ VYG N + S +++ P + Y+A+K E + +Y +
Sbjct: 129 -FIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSF 187
Query: 250 GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIV 307
L + R +YGP P+ F ++ K+ T++ G + R++ YIDDIV
Sbjct: 188 KLPVIITRANNIYGPKQYPEKIIPKFINLLLNNKKCTIHGT--GKNT-RNYLYIDDIV 242
Score = 41 (19.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 380 NISLAQ-RELGYMPTTDLETGLKKFVRWYLSYYN 412
NI+ ++ LG+ + E G++K WY + N
Sbjct: 334 NINYSKLSNLGWKKSISWEEGIEKTFIWYKNNRN 367
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 211 (79.3 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 75/247 (30%), Positives = 123/247 (49%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY--YET-SLKKAR--KGLLERAGVF 134
+ V +TG AGF+GS ++L L+++ + +L +D + +E +L+ K LLE G
Sbjct: 1 MRVAITGGAGFIGSQLALNLQEKHE-ILIIDKMRSSATFENGNLQSFGHFKNLLEFDGE- 58
Query: 135 VIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS 194
+ DIND+ +L KI + + H AA + Q +++N+ F + +E S
Sbjct: 59 LFAGDINDEKVLKKIEDFKPEI-IFHQAAISDTTVFDQT--KVLQTNLNTFKDFIEL--S 113
Query: 195 SDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLS-I 253
D +++ASS+SVYG K KD ++P + YA +K + +A Y Y + +
Sbjct: 114 IDLNAKLIYASSASVYGDAKSPQTVGKD--EEPKNPYAFSKLMMDKLAKKY---YDKAHL 168
Query: 254 TGLRFFTVYGPW----GRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKG 309
GLR+F VYG + F I+ GK ++E D + RDFTYI D++
Sbjct: 169 VGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSD--QIYRDFTYIKDVINA 226
Query: 310 CLAGLDT 316
L LD+
Sbjct: 227 NLIALDS 233
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 51/189 (26%), Positives = 84/189 (44%)
Query: 223 RTDQPASLYAATKKAGEAIAHAYNHIYGLS-ITGLRFFTVYGPWGRPDMAYFFFTRDIIR 281
+ ++P + YA +K + +A Y Y + + GLR+F VYG G Y T ++
Sbjct: 140 KDEEPKNPYAFSKLMMDKLAKKY---YDKAHLVGLRYFNVYGK-GE---FYKNKTASMVL 192
Query: 282 --GKRITVYEAP---DGAS-VARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRI 335
G +I + P +G+ + RDFTYI D++ L LD+ + +
Sbjct: 193 QFGHQILAGKNPRLFEGSDQIYRDFTYIKDVINANLIALDS---------------KCGV 237
Query: 336 FNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTD 395
+N+G+ +V +L+K LK + +P P QF H L Q Y P
Sbjct: 238 YNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQF-HTEAKLDQT-WDYQPKFS 295
Query: 396 LETGLKKFV 404
LE G+K ++
Sbjct: 296 LEEGIKDYL 304
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 198 (74.8 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 64/234 (27%), Positives = 109/234 (46%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
T LVTG AGF+G + L RG V+ LD Y +L L A + DI
Sbjct: 3 TWLVTGRAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTLAS-LEGNADHIFVKGDI 59
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS---SDP 197
D +L+ ++ V++ AA++ V +++ P +++++N+ G + LLE + + P
Sbjct: 60 GDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALP 119
Query: 198 QPA-----IVWASSSSVYG-VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
+ S+ VYG + + F+E P S Y+A+K A + + A++H YGL
Sbjct: 120 DTRRDAFRFLHVSTDEVYGTLGETGKFTETTPY-APNSPYSASKAASDHLVRAFHHTYGL 178
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305
+ YGP+ P+ + G+ + VY DG V RD+ ++ D
Sbjct: 179 PVLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYG--DGKQV-RDWLFVSD 229
Score = 54 (24.1 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 387 ELGYMPTTDLETGLKKFVRWYLS 409
ELG+ P E G+ + V WYL+
Sbjct: 307 ELGWEPAYTFEQGIAQTVDWYLT 329
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 164 (62.8 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 52/169 (30%), Positives = 83/169 (49%)
Query: 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID 137
RG TVL+TG G++GS SLAL + V+ +DN N ++ + +R +
Sbjct: 3 RG-TVLITGGTGYIGSFTSLALLENDYDVVIVDNLYNSSAVAIDRIELICGKRPAFH--N 59
Query: 138 ADINDKSLLDKIFNV-VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
DI D++ LDK+F+ V+H AA V + + P Y N+ G ++LL + + +
Sbjct: 60 VDITDEAALDKVFDAHPEIDSVIHFAALKAVGESGEIPLEYYRVNVGGSISLLRSMQKHN 119
Query: 197 PQPAIVWASSSSVYG----VNKKVPFSEKDRTDQPASLYAATKKAGEAI 241
IV++SS++VYG V +P E P + Y TK E +
Sbjct: 120 VCN-IVFSSSATVYGDATRVPNMIPIPEHCPIG-PTNTYGRTKSTIEDV 166
Score = 94 (38.1 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 31/119 (26%), Positives = 54/119 (45%)
Query: 288 YEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVS 347
Y + DG ++ RD+ ++ D+ KG LA L+ P + +NLG+ V
Sbjct: 240 YSSRDGTAI-RDYIHVLDLAKGHLAALN--------YLRDNKPG-VKAWNLGSGRGSTVF 289
Query: 348 RLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
++ ++ +V+P R GDV AN +LA +ELG+ +E + +W
Sbjct: 290 EMIKAFSSVVGRDLPYEVVPR-RQGDVLDLTANPALANKELGWKTELRMEDACQDLWKW 347
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 199 (75.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 64/234 (27%), Positives = 109/234 (46%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
T LVTG AGF+G + L RG V+ LD Y +L L A + DI
Sbjct: 3 TWLVTGGAGFIGGNFVLEAVSRGIRVVNLDALT--YAGNLNTLAS-LEGNADHIFVKGDI 59
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS---SDP 197
D +L+ ++ V++ AA++ V +++ P +++++N+ G + LLE + + P
Sbjct: 60 GDGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALP 119
Query: 198 QPA-----IVWASSSSVYG-VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
+ S+ VYG + + F+E P S Y+A+K A + + A++H YGL
Sbjct: 120 DTRRDAFRFLHVSTDEVYGTLGETGKFTETTPY-APNSPYSASKAASDHLVRAFHHTYGL 178
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305
+ YGP+ P+ + G+ + VY DG V RD+ ++ D
Sbjct: 179 PVLTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYG--DGKQV-RDWLFVSD 229
Score = 51 (23.0 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 387 ELGYMPTTDLETGLKKFVRWYLS 409
ELG+ P E G+ V WYL+
Sbjct: 307 ELGWEPAYTFEQGIALTVDWYLT 329
>UNIPROTKB|P37759 [details] [associations]
symbol:rfbB "RmlB" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=IEA]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process"
evidence=IEA;ISS] [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=IEA;ISS] [GO:0009243 "O antigen biosynthetic
process" evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
Pfam:PF01370 UniPathway:UPA00124 UniPathway:UPA00281
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009103 OMA:KWWSRVL EMBL:U09876
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PIR:H64969 RefSeq:NP_416545.1 RefSeq:YP_490283.1
ProteinModelPortal:P37759 SMR:P37759 DIP:DIP-10680N IntAct:P37759
MINT:MINT-1302103 PRIDE:P37759 EnsemblBacteria:EBESCT00000003521
EnsemblBacteria:EBESCT00000014484 GeneID:12930685 GeneID:945276
KEGG:ecj:Y75_p2004 KEGG:eco:b2041 PATRIC:32119415 EchoBASE:EB2311
EcoGene:EG12412 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
BioCyc:EcoCyc:DTDPGLUCDEHYDRAT-MONOMER
BioCyc:ECOL316407:JW2026-MONOMER
BioCyc:MetaCyc:DTDPGLUCDEHYDRAT-MONOMER Genevestigator:P37759
PANTHER:PTHR10366:SF41 Uniprot:P37759
Length = 361
Score = 211 (79.3 bits), Expect = 8.1e-15, P = 8.1e-15
Identities = 94/351 (26%), Positives = 149/351 (42%)
Query: 80 LTVLVTGAAGFVGSHVSL-ALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
+ +LVTG AGF+GS V + D V+ +D Y A ER VF A
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT-YAGNRESLADVSDSERY-VFE-HA 57
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS---- 194
DI D + +IF VMHLAA++ V ++ P +++E+NI G LLE ++
Sbjct: 58 DICDAPAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 195 --SDPQPAIVW--ASSSSVYG-------VN--KKVPFSEKDRTDQPASLYAATKKAGEAI 241
SD + + + S+ VYG VN +++P + P+S Y+A+K + + +
Sbjct: 118 LDSDKKNSFRFHHISTDEVYGDLPHPDEVNNTEELPLFTETTAYAPSSPYSASKASSDHL 177
Query: 242 AHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301
A+ YGL YGP+ P+ + + GK + +Y D RD+
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQI---RDWL 234
Query: 302 YIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKIL-KVK 360
Y++D + L T N+ V + LL++I+ K K
Sbjct: 235 YVEDHARA----LYTVVTEGKAGETYNIGGHNEKKNID-----VVLTICDLLDEIVPKEK 285
Query: 361 A--ETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLS 409
+ E R G + + R LG+ P E+G++K V WYLS
Sbjct: 286 SYREQITYVADRPGHDRRYAIDAEKIGRALGWKPQETFESGIRKTVEWYLS 336
>UNIPROTKB|Q5QPP1 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00641123 SMR:Q5QPP1
Ensembl:ENST00000445705 Uniprot:Q5QPP1
Length = 194
Score = 194 (73.4 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 52/158 (32%), Positives = 84/158 (53%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET--SLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N + SL ++ + + E G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D+ L ++F +F V+H A V ++Q P Y N+ G + LLE K+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK 235
+ +V++SS++VYG + +P E T + Y +K
Sbjct: 125 KN-LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK 161
>UNIPROTKB|Q5QPP2 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 EMBL:AL031295 UniGene:Hs.632380
HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644364 SMR:Q5QPP2
Ensembl:ENST00000425913 Uniprot:Q5QPP2
Length = 195
Score = 194 (73.4 bits), Expect = 8.4e-15, P = 8.4e-15
Identities = 52/158 (32%), Positives = 84/158 (53%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET--SLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N + SL ++ + + E G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D+ L ++F +F V+H A V ++Q P Y N+ G + LLE K+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK 235
+ +V++SS++VYG + +P E T + Y +K
Sbjct: 125 KN-LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSK 161
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 210 (79.0 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 87/358 (24%), Positives = 149/358 (41%)
Query: 70 KSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDG--VLGLDNFNNYYETSLKKARKGL 127
+S P + VLVTG AGF+ SH+ ++L + ++ LD + Y SLK +
Sbjct: 8 ESLGPPDSFAKRVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKNLET-I 64
Query: 128 LERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVN 187
+ I DI D + +F V+H AAQ V + + N+ G +
Sbjct: 65 SNKQNYKFIQGDICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-TH 123
Query: 188 LLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNH 247
+L + ++ S+ VYG + F E QP + YA++K A E +Y
Sbjct: 124 VLVSAAHEARVEKFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWE 182
Query: 248 IYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIV 307
Y + R VYGP P+ F + ++ ++ G R+F Y D+V
Sbjct: 183 QYKFPVVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGT--GLQT-RNFLYATDVV 239
Query: 308 KGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVS-LLEKILKVKAETK-- 364
+ L L P E I+N+G + V +L L++ I + +E++
Sbjct: 240 EAFLTVLKKGK-----------PGE--IYNIGTNFEMSVLQLAKELIQLIKETNSESEME 286
Query: 365 -----VLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL-SYYNSASA 416
V P N D+++ + + LG+ P + G+KK + WY +++N +A
Sbjct: 287 NWVDYVDDRPTN-DMRYPMKSEKI--HGLGWRPKVPWKEGIKKTIEWYRENFHNWKNA 341
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 210 (79.0 bits), Expect = 1.1e-14, P = 1.1e-14
Identities = 87/350 (24%), Positives = 146/350 (41%)
Query: 80 LTVLVTGAAGFVGSHVSL-ALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
+ +L+TG AGF+GS V +K D V+ +D Y +L+ + E A
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT--YAGNLESL-SDISESNRYNFEHA 57
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS---- 194
DI D + + +IF VMHLAA++ V ++ P +++E+NI G LLE +
Sbjct: 58 DICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA 117
Query: 195 --SDPQPAIVW--ASSSSVYG-------VNKKV--PFSEKDRTDQPASLYAATKKAGEAI 241
D + + S+ VYG V V P + P+S Y+A+K + + +
Sbjct: 118 LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHL 177
Query: 242 AHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301
A+ YGL YGP+ P+ + + GK + +Y D RD+
Sbjct: 178 VRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQI---RDWL 234
Query: 302 YIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFR--IFNLGNTTPVPVSRLVSLLEKILKV 359
Y++D + + + +F + + V + S E+I
Sbjct: 235 YVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQI--- 291
Query: 360 KAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLS 409
T V P + D ++ + RELG+ P E+G++K V WYL+
Sbjct: 292 ---TYVADRPGH-DRRYA-IDAGKISRELGWKPLETFESGIRKTVEWYLA 336
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 209 (78.6 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 84/342 (24%), Positives = 144/342 (42%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDG--VLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
VLVTG AGF+ SH+ ++L + ++ LD + Y SLK + + I D
Sbjct: 20 VLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLD--YCASLKNLET-ISNKQNYKFIQGD 76
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D + +F V+H AAQ V + + N+ G ++L +
Sbjct: 77 ICDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLVSAAHEARVE 135
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
++ S+ VYG + F E QP + YA++K A E +Y Y + R
Sbjct: 136 KFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWEQYKFPVVITRSS 194
Query: 260 TVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXX 319
VYGP P+ F + ++ ++ + G R+F Y D+V+ L L
Sbjct: 195 NVYGPHQYPEKVIPKFISLLQHNRKCCIHGS--GLQT-RNFLYATDVVEAFLTVLKKGK- 250
Query: 320 XXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVS-LLEKILKVKAETK-------VLPLPRN 371
P E I+N+G + V +L L++ I + +E++ V P N
Sbjct: 251 ----------PGE--IYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTN 298
Query: 372 GDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL-SYYN 412
D+++ + + LG+ P + G+KK + WY +++N
Sbjct: 299 -DMRYPMKSEKI--HGLGWRPKVPWKEGIKKTIEWYRENFHN 337
>DICTYBASE|DDB_G0275295 [details] [associations]
symbol:galE "UDP-glucose 4-epimerase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016853 "isomerase activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
UniPathway:UPA00214 InterPro:IPR016040 dictyBase:DDB_G0275295
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GenomeReviews:CM000151_GR EMBL:AAFI02000013 GO:GO:0044237
eggNOG:COG1087 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P04397 OMA:ADKAWNA RefSeq:XP_643834.1
ProteinModelPortal:Q553X7 SMR:Q553X7 STRING:Q553X7
EnsemblProtists:DDB0231575 GeneID:8619881 KEGG:ddi:DDB_G0275295
ProtClustDB:CLSZ2729193 Uniprot:Q553X7
Length = 344
Score = 208 (78.3 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 91/344 (26%), Positives = 154/344 (44%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
++VTG AG++GSH + L + G + +DN +N ++K+ + +D +N
Sbjct: 8 IMVTGGAGYIGSHTVIELIEAGYTPVIVDNLSNSSLEAIKRVESITGKEIEFHHVDI-MN 66
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
+K+L D+IF V+H A V + + P Y +NIAG + LL + +
Sbjct: 67 EKAL-DEIFETGNIRSVIHFAGLKAVGESNKLPLKYYNNNIAGTLTLLNLMDKHRVKK-L 124
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAH---AYNHIYGLSITGLRF 258
V++SS++VYG VP +E D + Y TK E I A + + + LR+
Sbjct: 125 VFSSSATVYGDPHTVPITE-DFPLSATNPYGRTKLYVEGILQDLCASDPEWNCIM--LRY 181
Query: 259 FTVYG--PWGR--------PDMAYFFFTRDIIRGKR--ITV----YEAPDGASVARDFTY 302
F G P G P+ + T+ I GKR +++ Y PDG V RDF +
Sbjct: 182 FNPVGAHPSGLIGEDPKDIPNNLMPYVTQTAI-GKRPILSIFGNDYNTPDGTGV-RDFIH 239
Query: 303 IDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ KG ++ L + +NLG V +V L++ +
Sbjct: 240 VVDLAKGHISALSSLHSKKQGCVA---------YNLGTGRGYSVLEMVGALKQASHKEIP 290
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
+++ R GDV + A+ S A +ELG+ T + + + +W
Sbjct: 291 YQIVSR-RKGDVASSFADPSKALKELGWKATHNQDDMCRDAWKW 333
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 215 (80.7 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 68/231 (29%), Positives = 106/231 (45%)
Query: 82 VLVTGAAGFVGSHVSLAL-KKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+L+TGAAGF+ SHV+ L + D ++ LD + Y ++LK FV D
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLD--YCSNLKNLNPSKHSPNFKFV-KGD 65
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I L++ + +MH AAQ V + N + ++NI G LLE CK +
Sbjct: 66 IASADLVNHLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIR 125
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ S+ VYG + Q P + Y+ATK E + AY YGL + R
Sbjct: 126 RFIHVSTDEVYGETDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185
Query: 258 FFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308
VYGP P+ F +RG+ + ++ DG++V R + Y +D+ +
Sbjct: 186 GNNVYGPNQFPEKLIPKFILLAMRGQVLPIHG--DGSNV-RSYLYCEDVAE 233
>UNIPROTKB|Q0C421 [details] [associations]
symbol:HNE_0794 "Putative GDP-6-deoxy-D-lyxo-4-hexulose
reductase" species:228405 "Hyphomonas neptunium ATCC 15444"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0003824 "catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:CP000158 GenomeReviews:CP000158_GR
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167992 OMA:NLLEACA
RefSeq:YP_759522.1 ProteinModelPortal:Q0C421 STRING:Q0C421
GeneID:4288576 KEGG:hne:HNE_0794 PATRIC:32214396
BioCyc:HNEP228405:GI69-836-MONOMER Uniprot:Q0C421
Length = 324
Score = 206 (77.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 90/330 (27%), Positives = 139/330 (42%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
G +L+TGA GFVG ++ L G + + ++ A + L R G
Sbjct: 3 GRRILITGANGFVGGYMIRELVAAGY------QHSELHTLTVSGAEQSL--RIGQ-AHRC 53
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + + ++ V T ++HLAA A A +P++ N L E + P
Sbjct: 54 DLRDSASIHRLLQEVQPTGIVHLAAIALPSQAKADPSAAWAVNFEAVRQLGEAVLACSPH 113
Query: 199 PAIVWASSSSVYGVN-KKVPFSEKDRTD-QPASLYAATKKAGE-AIAHAYNHIYGLSITG 255
+V+A SS YG + V + + T +P + YAATK A + A+ N GL+
Sbjct: 114 AVLVFAGSSESYGASFNTVAGAVNEGTALRPLTPYAATKAAADVALGQMRND--GLNAVR 171
Query: 256 LRFFTVYGPWGRPDMAYFFFTRDI---IRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
R F GP PD F I I G V + RDF + D+V+G
Sbjct: 172 FRAFNHTGPGQSPDYVVASFAAQIAQIIAGDHPPVIRVGN-LDAMRDFVDVRDVVRGYRL 230
Query: 313 GLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKI--LKVKAETKVLPLPR 370
L+T P +FNL + TP + +++ L I + + ET L +
Sbjct: 231 ALETELD----------PVSEGVFNLASGTPRSIRSILNTLIDIAGVDIAIETDPAKLRK 280
Query: 371 NGDVQFTHANISLAQRELGYMPTTDLETGL 400
N DV T + + A+ ELG++P E L
Sbjct: 281 N-DVPRTWGDANRARTELGWVPYLAFEQTL 309
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 208 (78.3 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 90/354 (25%), Positives = 146/354 (41%)
Query: 80 LTVLVTGAAGFVGSHVSL-ALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
+ +LVTG AGF+GS V + D V+ +D Y +L+ F A
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLESLADVSDSERYAFE-HA 57
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS---- 194
DI D + +IF VMHLAA++ V ++ P +++E+NI G LLE ++
Sbjct: 58 DICDAVAMSRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSA 117
Query: 195 -SDPQPAIV---WASSSSVYGV---------NKKVPFSEKDRTDQPASLYAATKKAGEAI 241
+D + S+ VYG N+ +P + P+S Y+A+K + + +
Sbjct: 118 LNDEKKKSFRFHHISTDEVYGDLPHPDEANNNEALPLFTETTAYAPSSPYSASKASSDHL 177
Query: 242 AHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301
A+ YGL YGP+ P+ + + GK + +Y D RD+
Sbjct: 178 VRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQI---RDWL 234
Query: 302 YIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKIL-KVK 360
Y++D + L T N+ V + LL++I+ K K
Sbjct: 235 YVEDHARA----LYTVVTEGKAGETYNIGGHNEKKNID-----VVLTICDLLDEIVPKEK 285
Query: 361 A--ETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412
+ E R G + + RELG+ P E+G++K V WYL+ N
Sbjct: 286 SYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTN 339
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 203 (76.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 77/238 (32%), Positives = 111/238 (46%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +LVTG AGF+GSH+ L ++G VL LDNF T K+ L++ VI D
Sbjct: 1 MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFF----TGSKRNIDRLMDFHRFEVIRHD 56
Query: 140 INDKSLL--DKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
I + LL D+I+N LA A + NP +++++ G +N+L K
Sbjct: 57 IIEPILLEVDRIYN---------LACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRV-- 105
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTD-QPA---SLYAATKKAGEAIAHAYNHIYGLSI 253
+ I+ AS+S VYG P E + P S Y K+ E + Y+ G+ I
Sbjct: 106 RARILQASTSEVYGDPTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDI 165
Query: 254 TGLRFFTVYGP-WGRPD-MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKG 309
R F YGP D F +RG+ +TVY DG S R F Y+DD++ G
Sbjct: 166 RIARIFNTYGPRMAEHDGRVVSNFVVQALRGEDLTVYG--DG-SQTRSFCYVDDLLDG 220
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 59/254 (23%), Positives = 103/254 (40%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
+ +LA A + NP +++++ G +N+L K + I+ AS+S VYG P
Sbjct: 68 IYNLACPASPVHYQYNPVKTIKTSVMGTINMLGLAKRV--RARILQASTSEVYGDPTIHP 125
Query: 218 FSEKDRTD-QPA---SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF 273
E + P S Y K+ E + Y+ G+ I R F YGP +
Sbjct: 126 QPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYGP-RMAEHDGR 184
Query: 274 FFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEF 333
+ +++ R S R F Y+DD++ G + ++ P
Sbjct: 185 VVSNFVVQALRGEDLTVYGDGSQTRSFCYVDDLLDGLVTLME--------HDQFCGPV-- 234
Query: 334 RIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT 393
NLGN P+ + + ++ PLP + D + +I+LA+ LG+ P
Sbjct: 235 ---NLGNPEETPIIEFARRIIAMTGSSSQIIYRPLPSD-DPRQRQPDITLARTILGWEPR 290
Query: 394 TDLETGLKKFVRWY 407
L+ GL K + ++
Sbjct: 291 VSLDEGLAKTIEYF 304
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 205 (77.2 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 82/333 (24%), Positives = 139/333 (41%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDG--VLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
TVLVTG AGF+GSH+ AL R ++ +DN Y ++LK R + F I
Sbjct: 8 TVLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQ--YCSNLKNLRSVQASSSYSF-IPG 64
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + +F+ V H AA+ V + P+ ++ N+ G L+ + Q
Sbjct: 65 DVCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAVLVRASLEASVQ 124
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAY--NHIYGLSITGL 256
++ S+ VYG + PF E +P + Y+ +K A E+I +Y H + IT
Sbjct: 125 -RFIYISTDEVYGDSVDQPFDELS-PKRPTNPYSRSKAAAESIVTSYWLKHKFPAVIT-- 180
Query: 257 RFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV-ARDFTYIDDIVKGCLAGLD 315
R VYGP + F + + ++ T+ G+ + +R F Y+ D+ L ++
Sbjct: 181 RSSNVYGPRQHHEKVIPRFLSLLQQQQKCTI----QGSGLQSRHFLYVSDVTDAFLTVME 236
Query: 316 TAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDV- 374
E I L LV + K + ++ L + V
Sbjct: 237 KGILGEIYNIGTGF--EIPIIQLAR-------ELVQMTVKSVSAESLDDWLEFVEDRPVT 287
Query: 375 QFTHANISLAQRELGYMPTTDLETGLKKFVRWY 407
+ + S+ LG+ P G+++ V+WY
Sbjct: 288 ELRYPMNSVKLHRLGWRPKVAWTEGIRRTVQWY 320
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 204 (76.9 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 86/354 (24%), Positives = 149/354 (42%)
Query: 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDG--VLGLDNFNNYYETSLKKARKGLLERA 131
P S+ +LVTG AGF+ SHV ++L + ++ LD + Y SLK + +
Sbjct: 12 PPSSFAKRLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLD--YCASLKNLET-ISNKQ 68
Query: 132 GVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLET 191
I DI + + +F V+H AAQ V + + N+ G ++L +
Sbjct: 69 NYKFIQGDICNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFEFTYVNVYG-THVLVS 127
Query: 192 CKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
++ S+ VYG + F E QP + YA++K A E +Y Y
Sbjct: 128 AAHEARVEKFIYVSTDEVYGGSLDKEFDESS-PKQPTNPYASSKAAAECFVQSYWERYKF 186
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311
R VYGP P+ F + ++ ++ + G R+F Y D+V+ L
Sbjct: 187 PAVITRSSNVYGPHQYPEKVIPKFISLLQHNRKCCIHGS--GLQT-RNFLYATDVVEAFL 243
Query: 312 AGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVS-LLEKILKVKAETK------ 364
L P E I+N+G + V +L L++ I + +E++
Sbjct: 244 TVLKKGK-----------PGE--IYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVD 290
Query: 365 -VLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL-SYYNSASA 416
V P N D+++ + + + LG+ P + G+KK + WY +++N +A
Sbjct: 291 YVNDRPTN-DMRYPMKSEKI--QGLGWRPKVPWKEGIKKTIDWYRENFHNWKNA 341
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 202 (76.2 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 86/345 (24%), Positives = 144/345 (41%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +L++G AG++GSH K + LDN + + +++ +K RA F + D
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQK---IRAFKF-FEQD 56
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
++D + +F F ++H AA V +MQNP Y +N NL+ETC +
Sbjct: 57 LSDFQGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYMNNTVNTTNLIETCLQTGVNK 116
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAI---AHAYNHIYGLSITGL 256
+++S+++ YG + P + P + Y +K E + A N + I L
Sbjct: 117 -FIFSSTAATYG-EPQTPVVSETSPLAPINPYGRSKLMSEEVLRDASMANPEFKHCI--L 172
Query: 257 RFFTVYGPW-----GR--PDMAYFF-FTRDIIRGKRITV------YEAPDGASVARDFTY 302
R+F V G G+ P + GKR + Y+ DG + RDF +
Sbjct: 173 RYFNVAGACMDYTLGQRYPKATLLIKVAAECAAGKRDKLFIFGDDYDTKDGTCI-RDFIH 231
Query: 303 IDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+DDI LA LD E +FN+G V ++ ++K+ V +
Sbjct: 232 VDDISSAHLATLDYLQEN-----------ESNVFNVGYGHGFSVKEVIEAMKKVSGVDFK 280
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFVRW 406
++ P R GD ++ S + + P DLE K W
Sbjct: 281 VELAPR-RAGDPSVLISDASKIRNLTSWQPKYDDLELICKSAFDW 324
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 190 (71.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 61/230 (26%), Positives = 117/230 (50%)
Query: 80 LTVLVTGAAGFVGSH-VSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
+ +LVTG AGF+G++ V A+++ D + + + Y + ++ +E A + ++
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTY---AGRRESLADVEDA-IRLVQG 56
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D L+ ++ V V+H AA++ V A+ NP ++ +N+ G +LE + +
Sbjct: 57 DITDAELVSQL--VAESDAVVHFAAESHVDNALDNPEPFLHTNVIGTFTILEAVRRHGVR 114
Query: 199 PAIVWASSSSVYG---VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITG 255
+ S+ VYG ++ + F+E + P+S Y+ATK + + A+ YG+ T
Sbjct: 115 --LHHISTDEVYGDLELDDRARFTESTPYN-PSSPYSATKAGADMLVRAWVRSYGVRATI 171
Query: 256 LRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305
YGP+ + +++ G+R +Y A GA+V RD+ ++DD
Sbjct: 172 SNCSNNYGPYQHVEKFIPRQITNVLTGRRPKLYGA--GANV-RDWIHVDD 218
Score = 47 (21.6 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 387 ELGYMPT-TDLETGLKKFVRWY 407
EL + P TD E GL+ + WY
Sbjct: 287 ELCWAPKHTDFEEGLRTTIDWY 308
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 198 (74.8 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 68/250 (27%), Positives = 118/250 (47%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
V+HLAA++ V ++ + + +V +N+ G LL+ + + V S+ VYG +
Sbjct: 79 VVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAA-TRHGVASFVQVSTDEVYGSLEHGS 137
Query: 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTR 277
++E D +P S Y+A+K +G+ +A A++ +GL + R YGP P+ F
Sbjct: 138 WTE-DEPLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGPRQFPEKLIPRFIT 196
Query: 278 DIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFN 337
++ G R+ +Y DG +V R++ ++DD V+G + + T R++N
Sbjct: 197 LLMDGHRVPLYG--DGLNV-REWLHVDDHVRG-IEAVRTRGRAG------------RVYN 240
Query: 338 LGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLE 397
+G + LV LL + + R G + + + QRELG+ P DL
Sbjct: 241 IGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDLA 300
Query: 398 TGLKKFVRWY 407
GL V WY
Sbjct: 301 DGLAATVAWY 310
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 67/236 (28%), Positives = 114/236 (48%)
Query: 82 VLVTGAAGFVGS-HVSLALKKRG--DGVL-GLDNFNNYYETSLKKARKG----LLERAGV 133
+LVTGAAGF+GS +V L G D V+ LD A +G ER +
Sbjct: 5 LLVTGAAGFIGSQYVRTLLGPGGPPDVVVTALDALTYAGNPDNLAAVRGHPRYRFERGDI 64
Query: 134 FVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK 193
D + ++ V+HLAA++ V ++ + + +V +N+ G LL+
Sbjct: 65 ----CDAPGRRVM------AGQDQVVHLAAESHVDRSLLDASVFVRTNVHGTQTLLDAA- 113
Query: 194 SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSI 253
+ + V S+ VYG + ++E D +P S Y+A+K +G+ +A A++ +GL +
Sbjct: 114 TRHGVASFVQVSTDEVYGSLEHGSWTE-DEPLRPNSPYSASKASGDLLALAHHVSHGLDV 172
Query: 254 TGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKG 309
R YGP P+ F ++ G R+ +Y DG +V R++ ++DD V+G
Sbjct: 173 RVTRCSNNYGPRQFPEKLIPRFITLLMDGHRVPLYG--DGLNV-REWLHVDDHVRG 225
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 89/354 (25%), Positives = 143/354 (40%)
Query: 80 LTVLVTGAAGFVGSHVSL-ALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
+ +LVTG AGF+GS V + D V+ +D Y +L+ + + + +A
Sbjct: 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLT--YAGNLESLAE-ISDSERYSFENA 57
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS---- 194
DI D F VMHLAA++ V ++ P +++E+NI G LLE ++
Sbjct: 58 DICDAEGDGLYFGQHQLDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSG 117
Query: 195 -SDPQPA---IVWASSSSVYG-------VNKKVPFSEKDRTDQ--PASLYAATKKAGEAI 241
D + S+ VYG VN T P+S Y+A+K + + +
Sbjct: 118 LDDEKKKNFRFHHISTDEVYGDLPHPDEVNSNETLQLFTETTAYAPSSPYSASKASSDHL 177
Query: 242 AHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301
A+ YGL YGP+ P+ + + GK + +Y D RD+
Sbjct: 178 VRAWKRTYGLPTIVSNCSNNYGPYHFPEKLIPLVILNALEGKALPIYGKGDQI---RDWL 234
Query: 302 YIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKIL-KVK 360
Y++D + L T N+ V + LL++I+ K K
Sbjct: 235 YVEDHARA----LYTVVTEGKAGETYNIGGHNEKKNID-----VVFTICDLLDEIVPKEK 285
Query: 361 A--ETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412
+ E R G + + RELG+ P E+G++K V WYL+ N
Sbjct: 286 SYREQITYVADRPGHDRRYAIDADKISRELGWKPQETFESGIRKTVEWYLANTN 339
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 193 (73.0 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 71/245 (28%), Positives = 109/245 (44%)
Query: 73 RPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAG 132
R TR +L+TG AGFVGSH+ L G V+ LDN Y T KK + +
Sbjct: 131 RNEETRK-RILITGGAGFVGSHLVDKLMLDGHEVIALDN----YFTGRKKNVEHWIGHPN 185
Query: 133 VFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETC 192
++ D+ ++ F V + HLA+ A + M NP +++N G +N+L
Sbjct: 186 FEMVHHDV-----VNPYF--VEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLA 238
Query: 193 KSSDPQPAIVWASSSSVYGVNKKVPFSEKD----RTDQPASLYAATKKAGEAIAHAYNHI 248
K + ++ AS+S VYG + P E T P + Y K+ E++ AYN
Sbjct: 239 KRV--KATVLLASTSEVYGDPEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQ 296
Query: 249 YGLSITGLRFFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306
+ I R F +GP + F ++ K IT+Y +G R F Y+ D+
Sbjct: 297 ENIKIRIARIFNTFGPRMHMNDGRVVSNFIIQALQDKPITIYG--NGTQT-RSFQYVTDL 353
Query: 307 VKGCL 311
V G +
Sbjct: 354 VDGLI 358
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/259 (21%), Positives = 103/259 (39%)
Query: 153 VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212
V + HLA+ A + M NP +++N G +N+L K + ++ AS+S VYG
Sbjct: 199 VEVDQIYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRV--KATVLLASTSEVYGD 256
Query: 213 NKKVPFSEKD----RTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP 268
+ P E T P + Y K+ E++ AYN + I R F +GP
Sbjct: 257 PEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIFNTFGPRMHM 316
Query: 269 DMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXX 328
+ + II+ + + R F Y+ D+V G + +++
Sbjct: 317 NDGRVV-SNFIIQALQDKPITIYGNGTQTRSFQYVTDLVDGLIKLMNS---------NYS 366
Query: 329 XPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQREL 388
P N+GN + + +++ ++ V + D Q +I A ++
Sbjct: 367 LPV-----NIGNPEEHTIGQFATIIRDLVPGSTSEIVNLESQQDDPQQRRPDIRRAAEQI 421
Query: 389 GYMPTTDLETGLKKFVRWY 407
+ P ++ GL K V ++
Sbjct: 422 SWAPQVHMKDGLLKTVDYF 440
>POMBASE|SPBPB2B2.12c [details] [associations]
symbol:gal10 species:4896 "Schizosaccharomyces pombe"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=IDA]
[GO:0004034 "aldose 1-epimerase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030246 "carbohydrate binding" evidence=IEA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=ISS]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0042125
"protein galactosylation" evidence=IMP] [GO:0050662 "coenzyme
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 PomBase:SPBPB2B2.12c GO:GO:0005829 GO:GO:0005634
GO:GO:0033554 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030246 EMBL:CU329671 GenomeReviews:CU329671_GR
SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 RefSeq:NP_596858.1 ProteinModelPortal:Q9HDU3
STRING:Q9HDU3 EnsemblFungi:SPBPB2B2.12c.1 GeneID:2541411
KEGG:spo:SPBPB2B2.12c eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T BRENDA:5.1.3.2 NextBio:20802517
GO:GO:0004034 GO:GO:0033499 GO:GO:0042125 InterPro:IPR018052
PROSITE:PS00545 Uniprot:Q9HDU3
Length = 713
Score = 196 (74.1 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 60/190 (31%), Positives = 94/190 (49%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNF-NNYYETSLKKARKGLLERAGVFVIDADI 140
+LVTG AG++GSH + L G V+ +DN N+ Y+ AR + R + D+
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAV---ARVEFIVRKSIKFFKLDL 64
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
DK L +IF+ V+H AA V +M+ P Y ++NI G + LL + +
Sbjct: 65 RDKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVK-T 123
Query: 201 IVWASSSSVYG----VNKKVPFSEKDRTDQPASLYAATKKAGEAIA---HAYNHIYGLSI 253
+V++SS++VYG + +P E D P + Y TK A E I H ++ + +I
Sbjct: 124 VVFSSSATVYGDATRFDNMIPIPESCPND-PTNPYGKTKYAIENIIKDLHTSDNTWRGAI 182
Query: 254 TGLRFFTVYG 263
LR+F G
Sbjct: 183 --LRYFNPIG 190
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 187 (70.9 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 85/337 (25%), Positives = 136/337 (40%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGD--------GVLGLDNFNNYYETSLKKARKGLLERA 131
+ +LVTG AGF+GSH +L GD V +D Y +L+ + +
Sbjct: 1 MKILVTGGAGFIGSHFVTSLIS-GDIATPQPVTQVTVVDKLG--YGGNLRNLAEASADPR 57
Query: 132 GVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLET 191
FV DI D+ L++ + + V H AA+ V ++ +V SN+ G LL+
Sbjct: 58 FSFV-RGDICDEGLIEGL--MARHDTVAHFAAETHVDRSVVASGPFVASNLVGTQVLLDA 114
Query: 192 CKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
+ S+ VYG ++E P S YAA+K + +A AY+ +G+
Sbjct: 115 ALRHHIG-RFLHVSTDEVYGSIDTGSWAEGHPL-APNSPYAASKAGSDLLALAYHQTHGM 172
Query: 252 SITGLRFFTVYGPWGRPD-MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310
+ R YGP P+ M F TR ++ G + VY DG ++ RD+ ++ D +G
Sbjct: 173 DVVVTRCSNNYGPRQFPEKMIPLFVTR-LLDGLDVPVYG--DGRNI-RDWLHVSDHCRGL 228
Query: 311 LAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR 370
L ++++G L +L + A R
Sbjct: 229 ALALGAGRAG-------------EVYHIGGGWEATNLELTEILLEACGAPASRISFVTDR 275
Query: 371 NGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWY 407
G + + S ELGY P D G+ + V WY
Sbjct: 276 KGHDRRYSLDYSKIAGELGYRPRVDFTDGIAETVAWY 312
>ASPGD|ASPL0000035245 [details] [associations]
symbol:AN2951 species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=RCA] [GO:0005575
"cellular_component" evidence=ND] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
OMA:CEAILAD RefSeq:XP_660555.1 ProteinModelPortal:Q5B929
STRING:Q5B929 EnsemblFungi:CADANIAT00010133 GeneID:2873905
KEGG:ani:AN2951.2 OrthoDB:EOG4B8NNF Uniprot:Q5B929
Length = 428
Score = 104 (41.7 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 37/122 (30%), Positives = 55/122 (45%)
Query: 286 TVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVP 345
T +E DG +V RDF ++ D+ +G +A LD A FR FNLG
Sbjct: 309 TDWETEDGTAV-RDFIHVTDLARGHIAALDAANERKLAE-------NFRAFNLGTGRGHS 360
Query: 346 VSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT---TDLETGLKK 402
V +V +E + + + + P R GDV A + +Q+EL + TD L K
Sbjct: 361 VKEVVDAMESVSRKQIPVRAAPR-RPGDVGSCVAVATRSQQELRWKTEKSLTDACGSLCK 419
Query: 403 FV 404
F+
Sbjct: 420 FL 421
Score = 88 (36.0 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET 118
+LVTG GF+GSH +L L K V+ +DN +N +++
Sbjct: 49 ILVTGGLGFIGSHTTLELLKASYNVVVIDNLSNSFQS 85
Score = 86 (35.3 bits), Expect = 3.4e-12, Sum P(3) = 3.4e-12
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV--NKK 215
V+H AA V +++NP Y +N++G ++ T + +++SS++VYG
Sbjct: 144 VIHFAAYKAVEESIKNPLKYYANNVSGLIDFASTLGKYGIK-TFIFSSSATVYGTLATSG 202
Query: 216 VPFSE-----KDRTDQPASLYAATKKAGEA-IAHAY 245
+P E KD A A T +AG I + Y
Sbjct: 203 LPLKEELCAHKDEIYHDADGVAQTIRAGSTGITNPY 238
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 188 (71.2 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 90/362 (24%), Positives = 151/362 (41%)
Query: 46 ISPSPSATFRRHSSGGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSH-VSLALKKRGD 104
+S + +AT + ++ P +++++ + +L++G AGF+GSH V ++ +
Sbjct: 12 LSQAMAATSEKQNTTKPPPSPSPLRNSK-FCQPNMRILISGGAGFIGSHLVDKLMENEKN 70
Query: 105 GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQ 164
V+ DN Y T K+ K + +I D+ + L++ + HLA
Sbjct: 71 EVVVADN----YFTGSKENLKKWIGHPRFELIRHDVTEPLLIE-------VDRIYHLACP 119
Query: 165 AGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224
A + NP +++N+ G +N+L K + I+ S+S VYG P E
Sbjct: 120 ASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILLTSTSEVYGDPLIHPQPESYWG 177
Query: 225 D-QPA---SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFF--FTRD 278
+ P S Y K+ E + Y+ +G+ I R F YGP D F
Sbjct: 178 NVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQ 237
Query: 279 IIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNL 338
+RG+ +TV + P + R F Y+ D+V G + ++ P EF + L
Sbjct: 238 ALRGEALTV-QKP--GTQTRSFCYVSDMVDGLIRLME---GNDTGPINIGNPGEFTMVEL 291
Query: 339 GNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLET 398
T V L++ +I K+ T P R D IS A+ LG+ P L
Sbjct: 292 AET----VKELINPSIEI-KMVENTPDDPRQRKPD-------ISKAKEVLGWEPKVKLRE 339
Query: 399 GL 400
GL
Sbjct: 340 GL 341
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 186 (70.5 bits), Expect = 7.0e-12, P = 7.0e-12
Identities = 65/237 (27%), Positives = 110/237 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 88
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 89 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 140
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG + P SE + P + Y K+ E + +AY G+ + R
Sbjct: 141 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 200
Query: 258 FFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F +GP + F ++G+ +TVY + S R F Y+ D+V G +A
Sbjct: 201 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVA 254
Score = 148 (57.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 61/254 (24%), Positives = 107/254 (42%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
+ HLA+ A M NP +++N G +N+L K + ++ AS+S VYG + P
Sbjct: 99 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHP 156
Query: 218 FSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF 273
SE + P + Y K+ E + +AY G+ + R F +GP +
Sbjct: 157 QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRV 216
Query: 274 FFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEF 333
+ I++ + S R F Y+ D+V G +A +++ P
Sbjct: 217 V-SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS---------NVSSPV-- 264
Query: 334 RIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT 393
NLGN + L++ ++ +E + L ++ D Q +I A+ LG+ P
Sbjct: 265 ---NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQD-DPQKRKPDIKKAKLMLGWEPV 320
Query: 394 TDLETGLKKFVRWY 407
LE GL K + ++
Sbjct: 321 VPLEEGLNKAIHYF 334
Score = 39 (18.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 121 KKARKGLLERAGVFVIDADINDKSLLD 147
+K RK +L G + + + DK ++D
Sbjct: 28 EKDRKRILITGGAGFVGSHLTDKLMMD 54
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 187 (70.9 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 68/237 (28%), Positives = 107/237 (45%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH+ L +G V+ +DNF T K+ + L +I DI
Sbjct: 118 ILITGGAGFVGSHLVDDLMVQGHEVIVVDNFF----TGRKRNVEHWLGHENFELIHHDI- 172
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ +F + + HLA+ A + M NP +++N G +N+L K +
Sbjct: 173 ----VNPLF--IEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRV--MAKV 224
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG P E + P + Y K+ E +++AY + + R
Sbjct: 225 LIASTSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVAR 284
Query: 258 FFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F YGP + F +R + ITVY +G R F Y+ D+V G +A
Sbjct: 285 IFNTYGPRMHMNDGRVVSNFILQALRNETITVYG--NGKQT-RSFQYVSDLVDGMIA 338
Score = 142 (55.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 58/259 (22%), Positives = 104/259 (40%)
Query: 153 VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212
+ + HLA+ A + M NP +++N G +N+L K ++ AS+S VYG
Sbjct: 178 IEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRV--MAKVLIASTSEVYGD 235
Query: 213 NKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP 268
P E + P + Y K+ E +++AY + + R F YGP
Sbjct: 236 PTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHM 295
Query: 269 DMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXX 328
+ + I++ R R F Y+ D+V G +A +
Sbjct: 296 NDGRVV-SNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALM---------ASNYT 345
Query: 329 XPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQREL 388
P NLGN + +++K++ + K + D Q +I+ A++ L
Sbjct: 346 QPV-----NLGNPVEQTIGEFAEIIKKLVGGPSVIKQSKAMED-DPQRRKPDITRARQLL 399
Query: 389 GYMPTTDLETGLKKFVRWY 407
+ P LETGL++ + ++
Sbjct: 400 HWEPKVPLETGLQRTISYF 418
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 186 (70.5 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 65/237 (27%), Positives = 110/237 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 85 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 139
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 140 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 191
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG + P SE + P + Y K+ E + +AY G+ + R
Sbjct: 192 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 251
Query: 258 FFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F +GP + F ++G+ +TVY + S R F Y+ D+V G +A
Sbjct: 252 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVA 305
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 65/237 (27%), Positives = 110/237 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 145
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG + P SE + P + Y K+ E + +AY G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 258 FFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F +GP + F ++G+ +TVY + S R F Y+ D+V G +A
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVA 311
Score = 148 (57.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 61/254 (24%), Positives = 107/254 (42%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
+ HLA+ A M NP +++N G +N+L K + ++ AS+S VYG + P
Sbjct: 156 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHP 213
Query: 218 FSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF 273
SE + P + Y K+ E + +AY G+ + R F +GP +
Sbjct: 214 QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRV 273
Query: 274 FFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEF 333
+ I++ + S R F Y+ D+V G +A +++ P
Sbjct: 274 V-SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS---------NVSSPV-- 321
Query: 334 RIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT 393
NLGN + L++ ++ +E + L ++ D Q +I A+ LG+ P
Sbjct: 322 ---NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQD-DPQKRKPDIKKAKLMLGWEPV 377
Query: 394 TDLETGLKKFVRWY 407
LE GL K + ++
Sbjct: 378 VPLEEGLNKAIHYF 391
Score = 39 (18.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 121 KKARKGLLERAGVFVIDADINDKSLLD 147
+K RK +L G + + + DK ++D
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLMMD 111
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 65/237 (27%), Positives = 110/237 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 145
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG + P SE + P + Y K+ E + +AY G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 258 FFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F +GP + F ++G+ +TVY + S R F Y+ D+V G +A
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVA 311
Score = 148 (57.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 61/254 (24%), Positives = 107/254 (42%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
+ HLA+ A M NP +++N G +N+L K + ++ AS+S VYG + P
Sbjct: 156 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHP 213
Query: 218 FSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF 273
SE + P + Y K+ E + +AY G+ + R F +GP +
Sbjct: 214 QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRV 273
Query: 274 FFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEF 333
+ I++ + S R F Y+ D+V G +A +++ P
Sbjct: 274 V-SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS---------NVSSPV-- 321
Query: 334 RIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT 393
NLGN + L++ ++ +E + L ++ D Q +I A+ LG+ P
Sbjct: 322 ---NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQD-DPQKRKPDIKKAKLMLGWEPV 377
Query: 394 TDLETGLKKFVRWY 407
LE GL K + ++
Sbjct: 378 VPLEEGLNKAIHYF 391
Score = 39 (18.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 121 KKARKGLLERAGVFVIDADINDKSLLD 147
+K RK +L G + + + DK ++D
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLMMD 111
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 65/237 (27%), Positives = 110/237 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 145
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG + P SE + P + Y K+ E + +AY G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 258 FFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F +GP + F ++G+ +TVY + S R F Y+ D+V G +A
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVA 311
Score = 148 (57.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 61/254 (24%), Positives = 107/254 (42%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
+ HLA+ A M NP +++N G +N+L K + ++ AS+S VYG + P
Sbjct: 156 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHP 213
Query: 218 FSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF 273
SE + P + Y K+ E + +AY G+ + R F +GP +
Sbjct: 214 QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRV 273
Query: 274 FFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEF 333
+ I++ + S R F Y+ D+V G +A +++ P
Sbjct: 274 V-SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS---------NVSSPV-- 321
Query: 334 RIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT 393
NLGN + L++ ++ +E + L ++ D Q +I A+ LG+ P
Sbjct: 322 ---NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQD-DPQKRKPDIKKAKLMLGWEPV 377
Query: 394 TDLETGLKKFVRWY 407
LE GL K + ++
Sbjct: 378 VPLEEGLNKAIHYF 391
Score = 39 (18.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 121 KKARKGLLERAGVFVIDADINDKSLLD 147
+K RK +L G + + + DK ++D
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLMMD 111
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 65/237 (27%), Positives = 110/237 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 91 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 145
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG + P SE + P + Y K+ E + +AY G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 258 FFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F +GP + F ++G+ +TVY + S R F Y+ D+V G +A
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVA 311
Score = 148 (57.2 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 61/254 (24%), Positives = 107/254 (42%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
+ HLA+ A M NP +++N G +N+L K + ++ AS+S VYG + P
Sbjct: 156 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHP 213
Query: 218 FSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF 273
SE + P + Y K+ E + +AY G+ + R F +GP +
Sbjct: 214 QSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRV 273
Query: 274 FFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEF 333
+ I++ + S R F Y+ D+V G +A +++ P
Sbjct: 274 V-SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS---------NVSSPV-- 321
Query: 334 RIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT 393
NLGN + L++ ++ +E + L ++ D Q +I A+ LG+ P
Sbjct: 322 ---NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQD-DPQKRKPDIKKAKLMLGWEPV 377
Query: 394 TDLETGLKKFVRWY 407
LE GL K + ++
Sbjct: 378 VPLEEGLNKAIHYF 391
Score = 39 (18.8 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 121 KKARKGLLERAGVFVIDADINDKSLLD 147
+K RK +L G + + + DK ++D
Sbjct: 85 EKDRKRILITGGAGFVGSHLTDKLMMD 111
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 183 (69.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 84/328 (25%), Positives = 137/328 (41%)
Query: 80 LTVLVTGAAGFVGSH-VSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
+ +L++G AGF+GSH V ++ + V+ DN+ + +LKK + +I
Sbjct: 29 MRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKK----WIGHPRFELIRH 84
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ + L++ + HLA A + NP +++N+ G +N+L K +
Sbjct: 85 DVTEPLLIE-------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 137
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTD-QPA---SLYAATKKAGEAIAHAYNHIYGLSIT 254
I+ S+S VYG P E + P S Y K+ E + Y+ +G+ I
Sbjct: 138 --ILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 195
Query: 255 GLRFFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
R F YGP D F +RG+ +TV + P + R F Y+ D+V G +
Sbjct: 196 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTV-QKP--GTQTRSFCYVSDMVDGLMR 252
Query: 313 GLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNG 372
++ P EF + L T V L++ +I K+ T P R
Sbjct: 253 LME---GDDTGPINIGNPGEFTMVELAET----VKELINPSIEI-KMVENTPDDPRQRKP 304
Query: 373 DVQFTHANISLAQRELGYMPTTDLETGL 400
D I+ A+ LG+ P L GL
Sbjct: 305 D-------ITKAKEVLGWEPKVKLREGL 325
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 184 (69.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 65/237 (27%), Positives = 110/237 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+LVTG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 91 ILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 145
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 146 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 197
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG + P +E + P + Y K+ E + +AY G+ + R
Sbjct: 198 LLASTSEVYGDPEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 257
Query: 258 FFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F +GP + F ++G+ +TVY + S R F Y+ D+V G +A
Sbjct: 258 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVA 311
Score = 145 (56.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 60/254 (23%), Positives = 107/254 (42%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
+ HLA+ A M NP +++N G +N+L K + ++ AS+S VYG + P
Sbjct: 156 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHP 213
Query: 218 FSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF 273
+E + P + Y K+ E + +AY G+ + R F +GP +
Sbjct: 214 QTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRV 273
Query: 274 FFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEF 333
+ I++ + S R F Y+ D+V G +A +++ P
Sbjct: 274 V-SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS---------NVSSPV-- 321
Query: 334 RIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT 393
NLGN + L++ ++ +E + L ++ D Q +I A+ LG+ P
Sbjct: 322 ---NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQD-DPQKRKPDIKKAKLMLGWEPV 377
Query: 394 TDLETGLKKFVRWY 407
LE GL K + ++
Sbjct: 378 VPLEEGLNKAIHYF 391
Score = 40 (19.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 121 KKARKGLLERAGVFVIDADINDKSLLD 147
+K RK +L G + + + DK ++D
Sbjct: 85 EKDRKRILVTGGAGFVGSHLTDKLMMD 111
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 180 (68.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 63/234 (26%), Positives = 110/234 (47%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ L+TG AGFVG +++ L ++ V G NN E L V +I D
Sbjct: 1 MRALITGVAGFVGKYLANHLTEQNVEVFGTSR-NN--EAKLPN----------VEMISLD 47
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D + K+ + + ++ HLAA++ V+ + N +N+ G +++L+ + S+
Sbjct: 48 IMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDC 107
Query: 200 AIVWASSSSVYGV--NKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
I+ SS YG+ ++ P SE+++ +P S Y +K + +A Y YG+ I R
Sbjct: 108 RILTIGSSEEYGMILPEESPVSEENQL-RPMSPYGVSKASVGMLARQYVKAYGMDIIHTR 166
Query: 258 FFTVYGPWGRPDMAYFFFTRDII---RGKRITVYEAPDGASVARDFTYIDDIVK 308
F GP F + I+ K+ + + + +V RDFT + DIV+
Sbjct: 167 TFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAV-RDFTDVRDIVQ 219
Score = 155 (59.6 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 65/281 (23%), Positives = 123/281 (43%)
Query: 133 VFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETC 192
V +I DI D + K+ + + ++ HLAA++ V+ + N +N+ G +++L+
Sbjct: 41 VEMISLDIMDSQRVKKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAV 100
Query: 193 KSSDPQPAIVWASSSSVYGV--NKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYG 250
+ S+ I+ SS YG+ ++ P SE+++ +P S Y +K + +A Y YG
Sbjct: 101 RDSNLDCRILTIGSSEEYGMILPEESPVSEENQL-RPMSPYGVSKASVGMLARQYVKAYG 159
Query: 251 LSITGLRFFTVYGPWGRPDMAYFFFTRDII---RGKRITVYEAPDGASVARDFTYIDDIV 307
+ I R F GP F + I+ K+ + + + +V RDFT + DIV
Sbjct: 160 MDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAV-RDFTDVRDIV 218
Query: 308 KGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP 367
+ A ++N+ + + ++ LL + VK +T++ P
Sbjct: 219 Q--------AYWLLSQYGKTGD-----VYNVCSGIGTRIQDVLDLLLAMANVKIDTELNP 265
Query: 368 LP-RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWY 407
L R +V + + G+ P LE L + ++ Y
Sbjct: 266 LQLRPSEVPTLIGSNKRLKDSTGWKPRIPLEKSLFEILQSY 306
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 64/237 (27%), Positives = 110/237 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 68 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 122
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 123 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 174
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG + P +E + P + Y K+ E + +AY G+ + R
Sbjct: 175 LLASTSEVYGDPEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 234
Query: 258 FFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F +GP + F ++G+ +TVY + S R F Y+ D+V G +A
Sbjct: 235 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGS---GSQTRAFQYVSDLVNGLVA 288
Score = 145 (56.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 60/254 (23%), Positives = 107/254 (42%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
+ HLA+ A M NP +++N G +N+L K + ++ AS+S VYG + P
Sbjct: 133 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHP 190
Query: 218 FSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF 273
+E + P + Y K+ E + +AY G+ + R F +GP +
Sbjct: 191 QTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRV 250
Query: 274 FFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEF 333
+ I++ + S R F Y+ D+V G +A +++ P
Sbjct: 251 V-SNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNS---------NVSSPV-- 298
Query: 334 RIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT 393
NLGN + L++ ++ +E + L ++ D Q +I A+ LG+ P
Sbjct: 299 ---NLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQD-DPQKRKPDIKKAKLMLGWEPV 354
Query: 394 TDLETGLKKFVRWY 407
LE GL K + ++
Sbjct: 355 VPLEEGLNKAIHYF 368
Score = 39 (18.8 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 121 KKARKGLLERAGVFVIDADINDKSLLD 147
+K RK +L G + + + DK ++D
Sbjct: 62 EKDRKRILITGGAGFVGSHLTDKLMMD 88
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 180 (68.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 71/269 (26%), Positives = 116/269 (43%)
Query: 80 LTVLVTGAAGFVGSH-VSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
+ +LVTG AGF+GSH V ++ + V+ DN+ + +LKK + +I
Sbjct: 31 MRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKK----WIGHPRFELIRH 86
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ + +F V + HLA A + NP +++N+ G +N+L K +
Sbjct: 87 DVTEP-----LF--VEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR 139
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTD-QPA---SLYAATKKAGEAIAHAYNHIYGLSIT 254
I+ S+S VYG P +E + P S Y K+ E + Y+ +G+ I
Sbjct: 140 --ILLTSTSEVYGDPLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIR 197
Query: 255 GLRFFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
R F YGP D F +RG+ +TV + P + R F Y+ D+V+G +
Sbjct: 198 IARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTV-QKP--GTQTRSFCYVSDMVEGLMR 254
Query: 313 GLDTAXXXXXXXXXXXXPAEFRIFNLGNT 341
++ P EF + L T
Sbjct: 255 LME---GDQTGPINIGNPGEFTMVELAET 280
Score = 135 (52.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 60/252 (23%), Positives = 101/252 (40%)
Query: 153 VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212
V + HLA A + NP +++N+ G +N+L K + I+ S+S VYG
Sbjct: 94 VEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGAR--ILLTSTSEVYGD 151
Query: 213 NKKVPFSEKDRTD-QPA---SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP 268
P +E + P S Y K+ E + Y+ +G+ I R F YGP
Sbjct: 152 PLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNI 211
Query: 269 DMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXX 328
D + I + R + R F Y+ D+V+G + ++
Sbjct: 212 DDGRVV-SNFIAQALRGEALTVQKPGTQTRSFCYVSDMVEGLMRLME---------GDQT 261
Query: 329 XPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQREL 388
P N+GN + L +++++K E K++ + D + +IS A+ L
Sbjct: 262 GP-----INIGNPGEFTMVELAETVKELIKPDVEIKMVENTPD-DPRQRKPDISKAKEVL 315
Query: 389 GYMPTTDLETGL 400
G+ P L GL
Sbjct: 316 GWEPKVKLREGL 327
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 181 (68.8 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 64/237 (27%), Positives = 110/237 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 92 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 146
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 147 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 198
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG + P +E + P + Y K+ E + +AY G+ + R
Sbjct: 199 LLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 258
Query: 258 FFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F +GP + F ++G+ +TVY P + R F Y+ D+V G +A
Sbjct: 259 IFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY-GP--GTQTRAFQYVSDLVNGLVA 312
Score = 143 (55.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 60/254 (23%), Positives = 108/254 (42%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
+ HLA+ A M NP +++N G +N+L K + ++ AS+S VYG + P
Sbjct: 157 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHP 214
Query: 218 FSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF 273
+E + P + Y K+ E + +AY G+ + R F +GP +
Sbjct: 215 QNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRV 274
Query: 274 FFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEF 333
+ I++ + + R F Y+ D+V G +A +++ P
Sbjct: 275 V-SNFILQALQGEPLTVYGPGTQTRAFQYVSDLVNGLVALMNS---------NVSSPV-- 322
Query: 334 RIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT 393
NLGN + L++K++ +E + L ++ D Q +I A+ LG+ P
Sbjct: 323 ---NLGNPEEHTILEFAQLIKKLVGSGSEIQFLSEAQD-DPQKRKPDIRKAKLLLGWEPV 378
Query: 394 TDLETGLKKFVRWY 407
LE GL K + ++
Sbjct: 379 VPLEEGLNKAIHYF 392
Score = 39 (18.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 121 KKARKGLLERAGVFVIDADINDKSLLD 147
+K RK +L G + + + DK ++D
Sbjct: 86 EKDRKRILITGGAGFVGSHLTDKLMMD 112
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 181 (68.8 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 71/241 (29%), Positives = 106/241 (43%)
Query: 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID 137
+GL V+VTG AGFVGSH+ L RGD V+ +DNF T K+ +I
Sbjct: 117 KGLRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFF----TGRKENVMHHFSNPNFEMIR 172
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAG-VRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
D+ + LL+ + HLA A V Y NP +++N+ G +N+L K
Sbjct: 173 HDVVEPILLE-------VDQIYHLACPASPVHYKF-NPVKTIKTNVVGTLNMLGLAKRVG 224
Query: 197 PQPAIVWASSSSVYGVNKKVPFSEKDRTD-QPA---SLYAATKKAGEAIAHAYNHIYGLS 252
+ + S+S VYG + P E + P S Y K+ E + Y+ +
Sbjct: 225 AR--FLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVE 282
Query: 253 ITGLRFFTVYGPWGRPDMAYFF--FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310
+ R F YGP D F +R + +TVY DG R F ++ D+V+G
Sbjct: 283 VRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYG--DGKQT-RSFQFVSDLVEGL 339
Query: 311 L 311
+
Sbjct: 340 M 340
>SGD|S000000223 [details] [associations]
symbol:GAL10 "UDP-glucose-4-epimerase" species:4932
"Saccharomyces cerevisiae" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0006012 "galactose metabolic
process" evidence=IEA] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IMP;IDA] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IMP;IDA] [GO:0019318 "hexose metabolic
process" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0030246 "carbohydrate binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 UniPathway:UPA00214 UniPathway:UPA00242
InterPro:IPR016040 SGD:S000000223 GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030246 EMBL:BK006936
GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
Gene3D:2.70.98.10 eggNOG:COG2017 HOGENOM:HOG000247896 KO:K15917
OMA:CKDLWKW OrthoDB:EOG4NKG3T GO:GO:0004034 GO:GO:0033499
InterPro:IPR018052 PROSITE:PS00545 EMBL:Z35888 EMBL:X81324
EMBL:K02115 EMBL:M12348 EMBL:K01609 PIR:S45875 RefSeq:NP_009575.1
PDB:1Z45 PDBsum:1Z45 ProteinModelPortal:P04397 SMR:P04397
DIP:DIP-4891N MINT:MINT-526001 STRING:P04397 PeptideAtlas:P04397
PRIDE:P04397 EnsemblFungi:YBR019C GeneID:852307 KEGG:sce:YBR019C
CYGD:YBR019c GeneTree:ENSGT00530000063128 EvolutionaryTrace:P04397
NextBio:970981 Genevestigator:P04397 GermOnline:YBR019C
Uniprot:P04397
Length = 699
Score = 184 (69.8 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 91/341 (26%), Positives = 137/341 (40%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
VLVTG AG++GSH + L + G + DN +N S+ AR +L + + + D+
Sbjct: 14 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSV--ARLEVLTKHHIPFYEVDLC 71
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D+ L+K+F V+H A V + Q P Y +NI G V LLE + +
Sbjct: 72 DRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSK-F 130
Query: 202 VWASSSSVYGVNKK----VPFSEKDRTDQPASLYAATKKAGEAIAH-AYNHIY-GLSITG 255
V++SS++VYG + +P E+ P + Y TK A E I + YN
Sbjct: 131 VFSSSATVYGDATRFPNMIPIPEECPLG-PTNPYGHTKYAIENILNDLYNSDKKSWKFAI 189
Query: 256 LRFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305
LR+F G P G P+ + + + G+R +Y D +RD T I D
Sbjct: 190 LRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAV-GRREKLYIFGDDYD-SRDGTPIRD 247
Query: 306 IVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKV 365
+ R +NLG+ V + K + KV
Sbjct: 248 YIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKV 307
Query: 366 LPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
R GDV A A+REL + +E K +W
Sbjct: 308 TGR-RAGDVLNLTAKPDRAKRELKWQTELQVEDSCKDLWKW 347
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 161 (61.7 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 64/248 (25%), Positives = 104/248 (41%)
Query: 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI 136
+ L + +TGA GF+ SH++ LK G V+ D N + T +F
Sbjct: 25 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------------DMFCD 72
Query: 137 DADINDKSLLDKIFNVV-AFTHVMHLAAQ-AGVRYAMQNPNSYVESNIAGFVNLLETCKS 194
+ + D +++ V HV +LAA G+ + N + + +N N++E +
Sbjct: 73 EFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARI 132
Query: 195 SDPQPAIVWASSSSVYGVNKK-----VPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHI 248
+ + +ASS+ +Y K+ V E D +P Y K A E + YN
Sbjct: 133 NGIK-RFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKD 191
Query: 249 YGLSITGLRFFTVYGP---W--GRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303
+G+ RF +YGP W GR F + R ++ DG R FT+I
Sbjct: 192 FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWG--DGLQT-RSFTFI 248
Query: 304 DDIVKGCL 311
D+ V+G L
Sbjct: 249 DECVEGVL 256
Score = 58 (25.5 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 25/110 (22%), Positives = 49/110 (44%)
Query: 298 RDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRI-FNLGNTTPVPVSRLVSLLEKI 356
R FT+ID+ V+G L ++FR N+G+ V ++ + ++
Sbjct: 243 RSFTFIDECVEGVLR---------------LTKSDFREPVNIGSDEMVSMNEMAEMVLSF 287
Query: 357 LKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
+ K +P P V+ +++ +L + +LG+ P L+ GL+ W
Sbjct: 288 EEKKLPIHHIPGPEG--VRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFW 335
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 80/338 (23%), Positives = 135/338 (39%)
Query: 82 VLVTGAAGFVGS-HVSLALKK-RGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
VL+TG GF+GS +++ K + + D + S K + E ++A
Sbjct: 11 VLITGGCGFIGSNYINFTFNKWKNTKFINYDKLA--FGASPLHVEKEIRESPRYKFVEAA 68
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
+ D+ L K V+H AA V + + ++ NI LLE+ +S +
Sbjct: 69 LEDQPTLIKTLQENEVDMVIHFAAITHVDESYSDRIGTIQDNIISTTTLLESIVNSPYKG 128
Query: 200 A--IVWASSSSVYG--VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITG 255
+V S+ VYG P SE P + YAA+K A E + +Y H Y L
Sbjct: 129 VKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWHSYKLPYVM 188
Query: 256 LRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315
+R VYGP FT+ + GK + DG R + Y++D C +
Sbjct: 189 VRMNNVYGPRQIHTKLIPKFTKLALDGKPYPLMG--DGLHT-RSWMYVED----CSEAIT 241
Query: 316 TAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNG--D 373
+F + N+ T + + + LL + + A T P+P D
Sbjct: 242 RVALEGTLGEIYNIGTDFEMTNIELTKMIHFT-VSKLLNR--EPTAPT-FAPIPDRPYHD 297
Query: 374 VQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
++ + + S + +G+ TT GL K + +Y+ +
Sbjct: 298 RRY-YIDFSKIRNAMGWQCTTPFSEGLMKTIDYYVKLH 334
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 116 (45.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 33/115 (28%), Positives = 59/115 (51%)
Query: 80 LTVLVTGAAGFVGSHVSL-ALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
+ +LVTG AGF+GS V + D V+ +D Y +L+ + +
Sbjct: 1 MKILVTGGAGFIGSAVVRHIIGNTQDCVVNVDKLT--YAGNLESLTS-VADSPRYTFEKV 57
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK 193
DI D++ L+++F++ VMHLAA++ V ++ ++++NI G LLE +
Sbjct: 58 DICDRTELERVFSLHQPDAVMHLAAESHVDRSITGSADFIQTNIVGTYTLLEAAR 112
Score = 105 (42.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 44/183 (24%), Positives = 70/183 (38%)
Query: 227 PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRIT 286
P+S Y+A+K + + + A+ YG YGP+ P+ + + GK +
Sbjct: 181 PSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLP 240
Query: 287 VYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPV 346
+Y D RD+ Y++D + + E R + T
Sbjct: 241 IYGKGDQI---RDWLYVEDHARALFKVVTEGKVGETYNIGGHN--EKRNLEVVQTI---C 292
Query: 347 SRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
S L SL+ K AE R G + + + EL + P ETGL+K V W
Sbjct: 293 SILDSLVPKNTPY-AEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETGLRKTVEW 351
Query: 407 YLS 409
YL+
Sbjct: 352 YLA 354
>ASPGD|ASPL0000073187 [details] [associations]
symbol:ugeA species:162425 "Emericella nidulans"
[GO:0006012 "galactose metabolic process" evidence=RCA;IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=RCA;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0042125 "protein
galactosylation" evidence=IEA] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:BN001303
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 OMA:ADKAWNA
ProteinModelPortal:C8VAU8 EnsemblFungi:CADANIAT00005702
Uniprot:C8VAU8
Length = 371
Score = 147 (56.8 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 52/172 (30%), Positives = 79/172 (45%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
+VLVTG G++GS +LAL + G V+ DN N +L + L+ D+
Sbjct: 5 SVLVTGGTGYIGSFTTLALLEAGYKVVVADNLYNSSAEALNRIE--LISGKKAEFAQLDV 62
Query: 141 NDKSLLDKIFNVVA-FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
D++ DK+F V+H AA V + + P Y N+ G + LL + +
Sbjct: 63 TDEAAFDKVFEAHPDIDSVIHFAALKAVGESGEKPLDYYHVNVYGTICLLRSMVRHNVTN 122
Query: 200 AIVWASSSSVYGVNKK----VPFSEKDRTDQPASLYAATKKAGE-AIAHAYN 246
IV++SS++VYG + +P E P + Y TK A E AI N
Sbjct: 123 -IVFSSSATVYGDATRFPDMIPIPEHCPLG-PTNPYGNTKFAIELAITDVIN 172
Score = 69 (29.3 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 31/119 (26%), Positives = 47/119 (39%)
Query: 288 YEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVS 347
Y + DG ++ RD+ +I D+ G L L+ P R +NLG V
Sbjct: 242 YASHDGTAI-RDYIHILDLADGHLKALN--------YLRANNPG-VRAWNLGTGRGSTVY 291
Query: 348 RLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
++ K + +V P R GDV +N + A ELG+ LE + W
Sbjct: 292 EMIRAFSKAVGRDLPYEVAPR-RAGDVLNLTSNPTRANTELGWKAQRTLEQACEDLWLW 349
Score = 39 (18.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 397 ETGLKKFVRWYLSYYNSASASPS 419
ET K+ L Y+N A A PS
Sbjct: 184 ETEAAKWNGALLRYFNPAGAHPS 206
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 174 (66.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 64/239 (26%), Positives = 110/239 (46%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 89 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 143
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 144 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 195
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ AS+S VYG + P +E + P + Y K+ E + +AY G+ + R
Sbjct: 196 LLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVAR 255
Query: 258 FFTVYGPWGRPDM----AYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
F +G R M F ++G+ +TVY + S R F Y+ D+V G ++
Sbjct: 256 IFNTFG--SRMHMNDGRVVSNFILQALQGEALTVYGS---GSQTRAFQYVSDLVNGLVS 309
Score = 145 (56.1 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 60/255 (23%), Positives = 109/255 (42%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP 217
+ HLA+ A M NP +++N G +N+L K + ++ AS+S VYG + P
Sbjct: 154 IYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHP 211
Query: 218 FSEK--DRTDQ--PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF 273
+E + P + Y K+ E + +AY G+ + R F +G R M
Sbjct: 212 QNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFG--SRMHMNDG 269
Query: 274 FFTRD-IIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAE 332
+ I++ + S R F Y+ D+V G ++ +++ P
Sbjct: 270 RVVSNFILQALQGEALTVYGSGSQTRAFQYVSDLVNGLVSLMNS---------NISSPV- 319
Query: 333 FRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMP 392
NLGN + L++ ++ ++ + LP ++ D Q +I A+ LG+ P
Sbjct: 320 ----NLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQD-DPQRRRPDIRKAKLLLGWEP 374
Query: 393 TTDLETGLKKFVRWY 407
LE GL K ++++
Sbjct: 375 VVPLEEGLNKTIQYF 389
Score = 39 (18.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 121 KKARKGLLERAGVFVIDADINDKSLLD 147
+K RK +L G + + + DK ++D
Sbjct: 83 EKDRKRILITGGAGFVGSHLTDKLMMD 109
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 177 (67.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 78/333 (23%), Positives = 132/333 (39%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAG----VFVID 137
V++TG GF+GS+ + NF N + L + + E ++
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTC----NFVNIDKLILNSDTQNVAESVRNSPRYKLVL 63
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI +++ + +F V+H AA V++N+ F+ LET ++
Sbjct: 64 TDIKNEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQNNVLSFIQFLETVRTYGK 123
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTD----QPASLYAATKKAGEAIAHAYNHIYGLSI 253
V S+ VYG + + +E+ + + P + YAATK AGEA AY Y L I
Sbjct: 124 IKRFVHISTDEVYG-DSDLSENEQGKVEFSRLVPGNPYAATKIAGEAYVRAYQTQYNLPI 182
Query: 254 TGLRFFTVYGP--WGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311
R +YGP W + F + RG+ Y R + ++DD G
Sbjct: 183 VTARMNNIYGPNQWDVKVVPRFIEIAKV-RGE----YTIQGSGKQLRSWLFVDDASAGLK 237
Query: 312 AGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN 371
A + E + +L T V + + K K+ + P N
Sbjct: 238 AVCEKGELHEIYNLGTYY--EKNVADLAKTIQEEVDLQLGRAHEPPKYKS---IPDRPYN 292
Query: 372 GDVQFTHANISLAQRELGYMPTTDLETGLKKFV 404
D+++ +I A+ +LG+ PTT + G++ V
Sbjct: 293 -DLRYL-ISIEKAKNDLGWEPTTSFDDGMRHTV 323
>TIGR_CMR|CJE_1611 [details] [associations]
symbol:CJE_1611 "GDP-mannose 4,6-dehydratase"
species:195099 "Campylobacter jejuni RM1221" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0044237 KO:K01711 GO:GO:0008446
HOGENOM:HOG000167992 RefSeq:YP_179592.1 ProteinModelPortal:Q5HSZ3
STRING:Q5HSZ3 GeneID:3232239 KEGG:cjr:CJE1611 PATRIC:20045019
OMA:RISIFYA ProtClustDB:CLSK931088
BioCyc:CJEJ195099:GJC0-1641-MONOMER Uniprot:Q5HSZ3
Length = 343
Score = 171 (65.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 68/219 (31%), Positives = 101/219 (46%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGD-GVLGL----DNFNNYYETSLKKARKGLLERAGVFV 135
T L+TG G VGS ++ L D V+G+ + +N Y S + +K +R +F
Sbjct: 4 TALITGFTGQVGSQMADFLLANTDYEVIGMMRWQEPMDNIYHLSDRINKK---DRISIFY 60
Query: 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETC--- 192
AD+ND S L K+F + HLAAQ+ + + P +++NI G N+LE
Sbjct: 61 --ADLNDYSSLQKLFESQRPDVIFHLAAQSYPKTSFDIPIETLQTNIIGTANILENIRIL 118
Query: 193 KSSDP-QPAIVWASSSSVYGVNKKVPFS-EKDRTDQPASLYAATKKAGEAIAHAYNHIYG 250
K+ D P + SSS VYG KV +D T AS Y+ +K + + Y Y
Sbjct: 119 KAKDGYDPVVHVCSSSEVYG-RAKVGIKLNEDTTFHGASPYSISKIGTDYLGRFYGEAYN 177
Query: 251 LSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYE 289
+ R T GP R D+ FF + K+I + E
Sbjct: 178 IRTFVTRMGTHSGP-RRSDV---FFESTV--AKQIALIE 210
>UNIPROTKB|Q5QPP4 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IEA] [GO:0006012
"galactose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 EMBL:AL031295 UniGene:Hs.632380 HGNC:HGNC:4116
HOVERGEN:HBG001396 IPI:IPI00030229 SMR:Q5QPP4
Ensembl:ENST00000429356 Uniprot:Q5QPP4
Length = 239
Score = 141 (54.7 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 53/192 (27%), Positives = 87/192 (45%)
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D+ L ++F +F V+H A V ++Q P Y N+ G + LLE K+ +
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK 61
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK-AGEAIAHAYNHIYGLSITGLR 257
+V++SS++VYG + +P E T + Y +K E I + LR
Sbjct: 62 N-LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 258 FFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFTY 302
+F G P G P+ + ++ I R + + V Y+ DG V RD+ +
Sbjct: 121 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV-RDYIH 179
Query: 303 IDDIVKGCLAGL 314
+ D+ KG +A L
Sbjct: 180 VVDLAKGHIAAL 191
Score = 62 (26.9 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 370 RNGDVQFTHANISLAQRELGYMPTTDLE 397
R GDV +AN SLAQ ELG+ L+
Sbjct: 210 REGDVAACYANPSLAQEELGWTAALGLD 237
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 167 (63.8 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 78/324 (24%), Positives = 144/324 (44%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGV--LGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
++V+G AGF+G H + K+ +D N Y ++ + + L + + D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLN--YASNATEI-ENLKSFSNFEFVHLD 65
Query: 140 INDKSLLDKIFNVVA-FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
++D L+ + + T +++ AA++ V + ++P + ++NI NLLE C +P
Sbjct: 66 LSDN--LEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPS 122
Query: 199 PA-IVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ S+ VYG + ++++ P + Y+A+K A + I +Y + Y L IT LR
Sbjct: 123 IGYFLHISTDEVYG-DVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 258 FFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317
VYGP P+ + I K I V+ G + R + Y+ DIV LA ++T
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGK--GTN-KRKYLYVLDIV---LA-IETV 234
Query: 318 XXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFT 377
+I+N+G T + L+ L+ +I + E + + D ++
Sbjct: 235 WIKNPMTTVN------QIYNIGGTDELDNLSLIKLIMEIFG-RGEIQFIKDRNYNDTNYS 287
Query: 378 HANISLAQRELGYMPTTDLETGLK 401
+ LG+ P L GL+
Sbjct: 288 IDTTKI--HNLGWSPKISLVQGLQ 309
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 167 (63.8 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 78/324 (24%), Positives = 144/324 (44%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGV--LGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
++V+G AGF+G H + K+ +D N Y ++ + + L + + D
Sbjct: 9 IVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLN--YASNATEI-ENLKSFSNFEFVHLD 65
Query: 140 INDKSLLDKIFNVVA-FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
++D L+ + + T +++ AA++ V + ++P + ++NI NLLE C +P
Sbjct: 66 LSDN--LEYLLKITKNTTDIINFAAESSVDRSFKDPVYFTKNNILATQNLLE-CHRLNPS 122
Query: 199 PA-IVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ S+ VYG + ++++ P + Y+A+K A + I +Y + Y L IT LR
Sbjct: 123 IGYFLHISTDEVYG-DVYEGDNKENAVMNPTNPYSASKAAIDLIIKSYQYSYKLPITILR 181
Query: 258 FFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317
VYGP P+ + I K I V+ G + R + Y+ DIV LA ++T
Sbjct: 182 PNNVYGPLQYPEKIIPLTIQCINEKKPIPVHGK--GTN-KRKYLYVLDIV---LA-IETV 234
Query: 318 XXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFT 377
+I+N+G T + L+ L+ +I + E + + D ++
Sbjct: 235 WIKNPMTTVN------QIYNIGGTDELDNLSLIKLIMEIFG-RGEIQFIKDRNYNDTNYS 287
Query: 378 HANISLAQRELGYMPTTDLETGLK 401
+ LG+ P L GL+
Sbjct: 288 IDTTKI--HNLGWSPKISLVQGLQ 309
>UNIPROTKB|Q5QPP3 [details] [associations]
symbol:GALE "UDP-glucose 4-epimerase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IEA] [GO:0006012 "galactose metabolic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
PANTHER:PTHR10366:SF39 TIGRFAMs:TIGR01179 EMBL:AL031295
UniGene:Hs.632380 HGNC:HGNC:4116 HOVERGEN:HBG001396 IPI:IPI00644339
SMR:Q5QPP3 Ensembl:ENST00000418277 Uniprot:Q5QPP3
Length = 227
Score = 151 (58.2 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 63/233 (27%), Positives = 101/233 (43%)
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D+ L ++F +F V+H A V ++Q P Y N+ G + LLE K+ +
Sbjct: 2 DILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK 61
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK-AGEAIAHAYNHIYGLSITGLR 257
+V++SS++VYG + +P E T + Y +K E I + LR
Sbjct: 62 N-LVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLR 120
Query: 258 FFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFTY 302
+F G P G P+ + ++ I R + + V Y+ DG V RD+ +
Sbjct: 121 YFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGV-RDYIH 179
Query: 303 IDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEK 355
+ D+ KG +A L RI+NLG T V ++V +EK
Sbjct: 180 VVDLAKGHIAAL----------RKLKEQCGCRIYNLGTGTGYSVLQMVQAMEK 222
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 85/343 (24%), Positives = 148/343 (43%)
Query: 82 VLVTGAAGFVGSH-VSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
++VTG AGF+GS+ V D V LD Y + + L +R + V D
Sbjct: 7 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT--YAGNRANLEEILGDRVELVV--GD 62
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D L+DK+ ++H AA++ ++++P+ ++ +N G LLE + D +
Sbjct: 63 IADSELVDKL--AAKADAIVHYAAESHNDNSLKDPSPFIYTNFVGTYILLEAARKYDIRF 120
Query: 200 AIVWASSSSVYG---VNKKVPF-----SEKDRTD---QPASLYAATKKAGEAIAHAYNHI 248
V S+ VYG + + +P EK + P+S Y++TK A + I A+
Sbjct: 121 HHV--STDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRS 178
Query: 249 YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308
+G+ T YGP+ + +I+ G + +Y +G +V RD+ + +D
Sbjct: 179 FGVKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYG--EGKNV-RDWIHTNDHST 235
Query: 309 GCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPL 368
G A L + I G V L+ LEK+ + K +
Sbjct: 236 GVWAILTKGRIGET----------YLIGADGEKNNKEVLELI--LEKMSQPKNAYDHVTD 283
Query: 369 PRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFVRWYLSY 410
D+++ + L + ELG+ P T+ E GL+ ++WY +
Sbjct: 284 RAGHDLRYAIDSTKLRE-ELGWKPQFTNFEEGLEDTIKWYTEH 325
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 58/200 (29%), Positives = 97/200 (48%)
Query: 83 LVTGAAGFVGSH-VSLALKKRGDG----VLGLDNFNNYYETSLKKARKGLLERAGVFVID 137
L+TG AGF+GS+ + A+ K D + L +NY L K +L + ++
Sbjct: 13 LITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSK----VLNQPNFRFLE 68
Query: 138 ADI--NDKSLLDKIFN---VVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETC 192
D+ N K L + + TH+++ AA++ V + +P + ++NI NLLE
Sbjct: 69 MDLATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECV 128
Query: 193 -----KSSDPQPAI--VWASSSSVYGV-NKKVPFSEKDRTDQPASLYAATKKAGEAIAHA 244
K + + + V S+ VYG ++ EK + + P S YAA+K A + I +
Sbjct: 129 RILLGKKEELRNRLNFVHVSTDEVYGEQDENASVDEKSKLN-PTSPYAASKAAVDLIIQS 187
Query: 245 YNHIYGLSITGLRFFTVYGP 264
Y + Y +S+T +R VYGP
Sbjct: 188 YRYSYKISVTVIRANNVYGP 207
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 56/180 (31%), Positives = 89/180 (49%)
Query: 84 VTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKA-RKGLLERAGVFVIDADIN 141
+TG G GS+++ L ++ V G+ ++ + T L + E A +F+ DI
Sbjct: 7 ITGITGQDGSYLAELLLRKDYEVHGMIRRSSSFNTERLSDIYEEKHKENARLFLHYGDIT 66
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D +L+K+ + + V +LAAQ+ VR + P +E+ G +N+LE K++D I
Sbjct: 67 DGLVLNKLIHEIKPHEVYNLAAQSHVRVSFDIPVYTMETIGLGTLNILEAIKNADNAKEI 126
Query: 202 VW--ASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL-SITGLRF 258
+ ASSS +YG K VP +E + P S YA K Y YGL + TG+ F
Sbjct: 127 RFYQASSSEMYGDVKSVPQTESTPFN-PRSPYACAKVFAHYQTINYRESYGLHASTGILF 185
>WB|WBGene00000266 [details] [associations]
symbol:bre-1 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0030017 "sarcomere" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005783 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0030017 GO:GO:0055120 GO:GO:0071688
GO:GO:0075015 GO:GO:0017085 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AM231683 EMBL:AM231684 EMBL:Z68215 PIR:T20182
RefSeq:NP_001076668.1 RefSeq:NP_001076669.1 RefSeq:NP_001076670.1
RefSeq:NP_501563.1 RefSeq:NP_501564.1 UniGene:Cel.13248
ProteinModelPortal:Q18801 SMR:Q18801 STRING:Q18801 PaxDb:Q18801
PRIDE:Q18801 EnsemblMetazoa:C53B4.7b GeneID:177717
KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717 WormBase:C53B4.7a
WormBase:C53B4.7b WormBase:C53B4.7c WormBase:C53B4.7d
WormBase:C53B4.7e GeneTree:ENSGT00440000033640 InParanoid:Q18801
OMA:IAYNLTD NextBio:898062 GO:GO:0042350 Uniprot:Q18801
Length = 399
Score = 152 (58.6 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 52/184 (28%), Positives = 89/184 (48%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLLERAG--VFVID-A 138
L+TG +G GS+++ L +G V G+ ++ + T+ ++ + G F +
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLET---CKSS 195
D+ D S L K+ + + T V HLAAQ+ V+ + P E + G + LL+ C+ +
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRLT 173
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
+ + AS+S +YG +++P SEK P S YA K G I Y Y + +
Sbjct: 174 E-KVRFYQASTSELYGKVQEIPQSEKTPF-YPRSPYAVAKMYGYWIVVNYREAYNMFACN 231
Query: 255 GLRF 258
G+ F
Sbjct: 232 GILF 235
>UNIPROTKB|Q18801 [details] [associations]
symbol:bre-1 "GDP-mannose 4,6 dehydratase 1" species:6239
"Caenorhabditis elegans" [GO:0017085 "response to insecticide"
evidence=IMP] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IDA] [GO:0075015 "formation of infection structure on or
near host" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005783
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0030017
GO:GO:0055120 GO:GO:0071688 GO:GO:0075015 GO:GO:0017085
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 EMBL:AM231683 EMBL:AM231684 EMBL:Z68215
PIR:T20182 RefSeq:NP_001076668.1 RefSeq:NP_001076669.1
RefSeq:NP_001076670.1 RefSeq:NP_501563.1 RefSeq:NP_501564.1
UniGene:Cel.13248 ProteinModelPortal:Q18801 SMR:Q18801
STRING:Q18801 PaxDb:Q18801 PRIDE:Q18801 EnsemblMetazoa:C53B4.7b
GeneID:177717 KEGG:cel:CELE_C53B4.7 UCSC:C53B4.7a.1 CTD:177717
WormBase:C53B4.7a WormBase:C53B4.7b WormBase:C53B4.7c
WormBase:C53B4.7d WormBase:C53B4.7e GeneTree:ENSGT00440000033640
InParanoid:Q18801 OMA:IAYNLTD NextBio:898062 GO:GO:0042350
Uniprot:Q18801
Length = 399
Score = 152 (58.6 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 52/184 (28%), Positives = 89/184 (48%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLLERAG--VFVID-A 138
L+TG +G GS+++ L +G V G+ ++ + T+ ++ + G F +
Sbjct: 54 LITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYSNPITHHGDSSFSLHYG 113
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLET---CKSS 195
D+ D S L K+ + + T V HLAAQ+ V+ + P E + G + LL+ C+ +
Sbjct: 114 DMTDSSCLIKLISTIEPTEVYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRLT 173
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
+ + AS+S +YG +++P SEK P S YA K G I Y Y + +
Sbjct: 174 E-KVRFYQASTSELYGKVQEIPQSEKTPF-YPRSPYAVAKMYGYWIVVNYREAYNMFACN 231
Query: 255 GLRF 258
G+ F
Sbjct: 232 GILF 235
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 148 (57.2 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 54/188 (28%), Positives = 86/188 (45%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ V +TGA G +GSH++ L G V + Y ++ + L+ G + D
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLAAGHDV-----YATYCRPTIDPSD---LQFNGA---EVD 49
Query: 140 INDK-SLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
I D S+ D I V HLAAQ+ + P + +N+ G + E + P
Sbjct: 50 ITDWCSVYDSIATFRPDA-VFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALRRVRPH 108
Query: 199 PAIVWASSSSVYG-VN-KKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGL 256
I+ A SS+ YG V+ +VP +E+ R +P Y +K A + +A+ Y+ YG+
Sbjct: 109 AKIIVAGSSAEYGFVDPSEVPINER-RELRPLHPYGVSKAATDMLAYQYHKSYGMHTVVA 167
Query: 257 RFFTVYGP 264
R F GP
Sbjct: 168 RIFNCTGP 175
>UNIPROTKB|O53454 [details] [associations]
symbol:MT1137 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase" species:1773 "Mycobacterium tuberculosis"
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IDA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0030283 "testosterone dehydrogenase
[NAD(P)] activity" evidence=IDA] [GO:0070403 "NAD+ binding"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886 EMBL:BX842575
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0030283 PIR:H70897
RefSeq:NP_215622.1 RefSeq:NP_335580.1 RefSeq:YP_006514475.1
ProteinModelPortal:O53454 SMR:O53454 PRIDE:O53454
EnsemblBacteria:EBMYCT00000002215 EnsemblBacteria:EBMYCT00000071008
GeneID:13319678 GeneID:886004 GeneID:924962 KEGG:mtc:MT1137
KEGG:mtu:Rv1106c KEGG:mtv:RVBD_1106c PATRIC:18124264
TubercuList:Rv1106c KO:K16045 OMA:IQLQPTF ProtClustDB:CLSK790953
BioCyc:MetaCyc:MONOMER-16889 BindingDB:O53454 ChEMBL:CHEMBL1744528
GO:GO:0070403 GO:GO:0016042 GO:GO:0008202 Uniprot:O53454
Length = 370
Score = 136 (52.9 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 66/235 (28%), Positives = 101/235 (42%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
VLVTG AGFVG+++ L RG V D SL A L G + DAD+
Sbjct: 17 VLVTGGAGFVGANLVTTLLDRGHWVRSFDR-----APSLLPAHPQLEVLQGD-ITDADVC 70
Query: 142 DKSL--LDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
++ +D IF+ A +M A Y + S+ N+ G NLL + + Q
Sbjct: 71 AAAVDGIDTIFHTAAIIELMG-GASVTDEYRQR---SFAV-NVGGTENLLHAGQRAGVQ- 124
Query: 200 AIVWASSSSVYGVNKKVPFSEKDR--TDQPASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
V+ SS+SV + + ++ TD+ LY TK E A N + G+ +R
Sbjct: 125 RFVYTSSNSVVMGGQNIAGGDETLPYTDRFNDLYTETKVVAERFVLAQNGVDGMLTCAIR 184
Query: 258 FFTVYGPWGRPDMAYFF-FTRDIIRGK-RITVYEAPDGASVAR-DFTYIDDIVKG 309
G WG D F +++G ++ V G AR D +Y+ +++ G
Sbjct: 185 ---PSGIWGNGDQTMFRKLFESVLKGHVKVLV-----GRKSARLDNSYVHNLIHG 231
Score = 51 (23.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 380 NISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
+I+ A+R+LGY P + L + + +Y+S +
Sbjct: 321 SIAKARRDLGYEPLFTTQQALTECLPYYVSLF 352
>UNIPROTKB|Q06952 [details] [associations]
symbol:rfbD "Probable GDP-mannose 4,6-dehydratase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 138 (53.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 57/206 (27%), Positives = 91/206 (44%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLLERAGVFVID-ADI 140
L+TG G GS+++ L ++G V G+ ++ + T + K E F + D+
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHYGDL 66
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK--SSDPQ 198
D S L +I V V +L AQ+ V + Q+P + + G + LLE + +
Sbjct: 67 TDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLTKK 126
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SITGL 256
AS+S +YG+ +++P +K+ T P S YA K I Y YG+ + G+
Sbjct: 127 TKFYQASTSELYGLVQEIP--QKETTPFYPRSPYAVAKMYAYWITINYRESYGIYACNGI 184
Query: 257 RFFTVYGPWGRPDMAYFFFTRDIIRG 282
F P F TR I RG
Sbjct: 185 LF-----NHESPRRGETFVTRKITRG 205
Score = 48 (22.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 370 RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFV 404
R +V+ + SLA++ELG++P L+ + + V
Sbjct: 314 RPAEVETLLGDPSLAKKELGWVPEITLQQMVSEMV 348
>TIGR_CMR|VC_0243 [details] [associations]
symbol:VC_0243 "GDP-mannose 4,6-dehydratase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0005622 GO:GO:0009103 GO:GO:0019673
GO:GO:0042351 EMBL:X59554 PIR:S28470 RefSeq:NP_229900.1
ProteinModelPortal:Q06952 SMR:Q06952 DNASU:2614706 GeneID:2614706
KEGG:vch:VC0243 PATRIC:20079530 eggNOG:COG1089 KO:K01711
OMA:INPKYFR ProtClustDB:CLSK793536 BioCyc:MetaCyc:MONOMER-13574
GO:GO:0008446 TIGRFAMs:TIGR01472 Uniprot:Q06952
Length = 373
Score = 138 (53.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 57/206 (27%), Positives = 91/206 (44%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLLERAGVFVID-ADI 140
L+TG G GS+++ L ++G V G+ ++ + T + K E F + D+
Sbjct: 7 LITGITGQDGSYLAEFLLEKGYEVHGIKRRSSLFNTQRVDHLYKDPHEEDVNFKLHYGDL 66
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK--SSDPQ 198
D S L +I V V +L AQ+ V + Q+P + + G + LLE + +
Sbjct: 67 TDSSNLTRILAEVQPDEVYNLGAQSHVAVSFQSPEYTADVDAIGTLRLLEAIRFLGLTKK 126
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SITGL 256
AS+S +YG+ +++P +K+ T P S YA K I Y YG+ + G+
Sbjct: 127 TKFYQASTSELYGLVQEIP--QKETTPFYPRSPYAVAKMYAYWITINYRESYGIYACNGI 184
Query: 257 RFFTVYGPWGRPDMAYFFFTRDIIRG 282
F P F TR I RG
Sbjct: 185 LF-----NHESPRRGETFVTRKITRG 205
Score = 48 (22.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 370 RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFV 404
R +V+ + SLA++ELG++P L+ + + V
Sbjct: 314 RPAEVETLLGDPSLAKKELGWVPEITLQQMVSEMV 348
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 134 (52.2 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 44/159 (27%), Positives = 69/159 (43%)
Query: 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG--VNKK 215
V+HLA Q V A ++P ++ N+ G +NLL+ K+ ++ SS VYG
Sbjct: 57 VIHLAGQTYVPEAFRDPARTLQINLLGTLNLLQALKARGFSGTFLYISSGDVYGQVAEAA 116
Query: 216 VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFF 275
+P E + P + YA +K A E++ + G + R F GP +
Sbjct: 117 LPIHE-ELIPHPRNPYAVSKLAAESLCLQWGITEGWRVLVARPFNHIGPGQKDSFVIASA 175
Query: 276 TRDIIR---GKRITVYEAPDGASVARDFTYIDDIVKGCL 311
R I R G + E D V+RDF + D++ L
Sbjct: 176 ARQIARMKQGLQANRLEVGD-IDVSRDFLDVQDVLSAYL 213
Score = 48 (22.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 82 VLVTGAAGFVGSHVSLAL 99
+ VTG +GFVG H+ L
Sbjct: 5 LFVTGLSGFVGKHLQAYL 22
>TIGR_CMR|GSU_0626 [details] [associations]
symbol:GSU_0626 "GDP-mannose 4,6-dehydratase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0019673
KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
RefSeq:NP_951684.1 ProteinModelPortal:Q74FI2 SMR:Q74FI2
GeneID:2685242 KEGG:gsu:GSU0626 PATRIC:22024003 OMA:YACAKAY
ProtClustDB:CLSK827959 BioCyc:GSUL243231:GH27-625-MONOMER
Uniprot:Q74FI2
Length = 349
Score = 140 (54.3 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 51/180 (28%), Positives = 83/180 (46%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLLER-AGVFVIDADI 140
L+TG +G GS+++ L +G V G+ ++ + T + + E +F+ D+
Sbjct: 5 LITGISGQDGSYLAELLLGKGYEVHGVIRRSSSFNTGRIDHLYRDPHEPDVRLFLHYGDL 64
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
ND S ++++ V + +L AQ+ VR + P E + G V LLE + +
Sbjct: 65 NDASSINRVLREVRPDEIYNLGAQSHVRVSFDVPEYTGEIDALGTVRLLEGIRETGLNTR 124
Query: 201 IVWASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SITGLRF 258
ASSS +YG K V +K+ T P S YA K I Y YG+ + G+ F
Sbjct: 125 FYQASSSELYG--KVVETPQKETTPFYPRSPYACAKAYAYYITVNYRESYGMYACNGILF 182
Score = 41 (19.5 bits), Expect = 7.6e-07, Sum P(2) = 7.6e-07
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 370 RNGDVQFTHANISLAQRELGYMPTTDLETGL 400
R +V + + A+R+LG+ P D + GL
Sbjct: 300 RPAEVDLLLGDPAKARRQLGWQPRVDFQ-GL 329
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 131 (51.2 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 47/168 (27%), Positives = 80/168 (47%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+L+TG AGFVGSH++ L G V +DNF T K+ + + +I+ D+
Sbjct: 34 ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFF----TGRKRNVEHWIGHENFELINHDV- 88
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
++ ++ + + HLA+ A M NP +++N G +N+L K + +
Sbjct: 89 ----VEPLY--IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGAR--L 140
Query: 202 VWASSSSVYGVNKKVPFSEK--DRTDQ--PASLYAATKKAGEAIAHAY 245
+ AS+S VYG + P SE + P + Y K+ E + +AY
Sbjct: 141 LLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAY 188
>UNIPROTKB|E2QS16 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270 KO:K12408
OMA:PCGLRLV EMBL:AAEX03004381 RefSeq:XP_547037.1
Ensembl:ENSCAFT00000026560 GeneID:489917 KEGG:cfa:489917
NextBio:20863025 Uniprot:E2QS16
Length = 369
Score = 131 (51.2 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 57/208 (27%), Positives = 88/208 (42%)
Query: 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID 137
R L LVTG GF+G HV L +R +L L F+ + L++ + G ++ V I
Sbjct: 8 RELVYLVTGGCGFLGEHVVRMLLQREPRLLELRVFDLHLGAWLEELKTGPVQ---VTAIQ 64
Query: 138 ADINDKSLLDKIFNVVAFTHVM-HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
D+ ++ VA HV+ H A V + +P + E N+ G N++E C +
Sbjct: 65 GDVTQAH---EVAAAVAGAHVVIHTAGLVDV-FGRASPETIYEVNVQGTKNVIEACVQTG 120
Query: 197 PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL-----YAATKKAGEAIAHAYN--HIY 249
+ +V+ SS V G N K + D P Y +K E + N ++
Sbjct: 121 TR-FLVYTSSMEVVGPNIKGHHFYRGNEDTPYEAVHRHPYPCSKAQAERLVLEANGRKVH 179
Query: 250 G---LSITGLRFFTVYGPWGRPDMAYFF 274
G L LR +YG G M F+
Sbjct: 180 GGLPLVTCALRPTGIYGE-GHQIMRDFY 206
Score = 51 (23.0 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 13/39 (33%), Positives = 17/39 (43%)
Query: 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
FT N A+R GY P E + +RW + SA
Sbjct: 331 FT-VNTDKARRHFGYEPLFSWEDSRTRTIRWVQAMEGSA 368
>UNIPROTKB|Q4K5C5 [details] [associations]
symbol:PFL_5490 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000076
GenomeReviews:CP000076_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167992 RefSeq:YP_262558.1 ProteinModelPortal:Q4K5C5
STRING:Q4K5C5 GeneID:3479881 KEGG:pfl:PFL_5490 PATRIC:19880467
OMA:EPNPAND ProtClustDB:CLSK881263
BioCyc:PFLU220664:GIX8-5527-MONOMER Uniprot:Q4K5C5
Length = 311
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 66/222 (29%), Positives = 104/222 (46%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLER-AGVFVIDADIN 141
L+TG GF G +V+ L++ G + G + G ER AG F +D I
Sbjct: 11 LITGLEGFTGRYVADELRRSGYEIFGTRH-------------SGADEREAGCFRVD--IC 55
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP-A 200
D + L ++ V V+HLAA + V + ++ +N+ G NLLE P A
Sbjct: 56 DLAALRRVVEEVEPEVVVHLAAISFVAHG--EADAIYRANVVGTRNLLEALAGLSRTPRA 113
Query: 201 IVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFT 260
++ ASS++VYG N V ++ + PA+ YA +K A E +A + H L I R F
Sbjct: 114 VLLASSANVYG-NAPVELIDESVSLAPANDYAVSKLAMEYMARLWMH--RLPIVIARPFN 170
Query: 261 VYGPWGRPDMAYFFFTRDIIR-GKRITVYEAPDGASVARDFT 301
G G+ ++F + + +R +V E + V RDF+
Sbjct: 171 YTGV-GQA--SHFLIPKIVSHFQRRASVIELGN-LDVERDFS 208
>UNIPROTKB|Q81V79 [details] [associations]
symbol:BA_0621 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000034276
OMA:DYAVEIF RefSeq:NP_843152.1 RefSeq:YP_017248.1
ProteinModelPortal:Q81V79 SMR:Q81V79 DNASU:1087994
EnsemblBacteria:EBBACT00000011110 EnsemblBacteria:EBBACT00000017957
GeneID:1087994 GeneID:2814938 KEGG:ban:BA_0621 KEGG:bar:GBAA_0621
PATRIC:18778842 ProtClustDB:CLSK865117
BioCyc:BANT261594:GJ7F-674-MONOMER Uniprot:Q81V79
Length = 317
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 61/236 (25%), Positives = 102/236 (43%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+LVTG+ G +GS L +K R V G +N T +++ ++ +G F D+
Sbjct: 4 ILVTGSLGQIGSE--LVMKLRD--VYGA---SNVIATDIRETDSEVVT-SGPFET-LDVT 54
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D L I ++HLAA A +NP N+ G VN LE + + +
Sbjct: 55 DGQKLHDIAKRNEVDTIIHLAALLSAT-AEKNPLFAWNLNMGGLVNALEAARELNCK--F 111
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRF--- 258
SS +G + + +D +P ++Y K AGE + Y+ +G+ G+RF
Sbjct: 112 FTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPGL 171
Query: 259 FTVYGP--WGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
+ P G D A + I +G T Y A +G + D Y+ D ++ ++
Sbjct: 172 ISYVAPPGGGTTDYAVEIYYEAIKKGT-YTSYIA-EGTYM--DMMYMPDALQAIIS 223
>TIGR_CMR|BA_0621 [details] [associations]
symbol:BA_0621 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
GO:GO:0044237 HOGENOM:HOG000034276 OMA:DYAVEIF RefSeq:NP_843152.1
RefSeq:YP_017248.1 ProteinModelPortal:Q81V79 SMR:Q81V79
DNASU:1087994 EnsemblBacteria:EBBACT00000011110
EnsemblBacteria:EBBACT00000017957 GeneID:1087994 GeneID:2814938
KEGG:ban:BA_0621 KEGG:bar:GBAA_0621 PATRIC:18778842
ProtClustDB:CLSK865117 BioCyc:BANT261594:GJ7F-674-MONOMER
Uniprot:Q81V79
Length = 317
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 61/236 (25%), Positives = 102/236 (43%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+LVTG+ G +GS L +K R V G +N T +++ ++ +G F D+
Sbjct: 4 ILVTGSLGQIGSE--LVMKLRD--VYGA---SNVIATDIRETDSEVVT-SGPFET-LDVT 54
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D L I ++HLAA A +NP N+ G VN LE + + +
Sbjct: 55 DGQKLHDIAKRNEVDTIIHLAALLSAT-AEKNPLFAWNLNMGGLVNALEAARELNCK--F 111
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRF--- 258
SS +G + + +D +P ++Y K AGE + Y+ +G+ G+RF
Sbjct: 112 FTPSSIGAFGPSTPKDNTPQDTIQRPTTMYGVNKVAGELLCDYYHQKFGVDTRGVRFPGL 171
Query: 259 FTVYGP--WGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312
+ P G D A + I +G T Y A +G + D Y+ D ++ ++
Sbjct: 172 ISYVAPPGGGTTDYAVEIYYEAIKKGT-YTSYIA-EGTYM--DMMYMPDALQAIIS 223
>UNIPROTKB|G4MZC9 [details] [associations]
symbol:MGG_11399 "Sterol-4-alpha-carboxylate
3-dehydrogenase" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006696 EMBL:CM001232
KO:K07748 GO:GO:0000252 RefSeq:XP_003713491.1
ProteinModelPortal:G4MZC9 EnsemblFungi:MGG_11399T0 GeneID:5051352
KEGG:mgr:MGG_11399 Uniprot:G4MZC9
Length = 371
Score = 121 (47.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 53/197 (26%), Positives = 87/197 (44%)
Query: 73 RPRSTRGL-TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERA 131
+P + L +VLV G GF+GSH+ L LD++ S R R
Sbjct: 3 KPETKFNLGSVLVVGGCGFLGSHIVRML---------LDDYK-CSAVSAVDLRCTRNRRE 52
Query: 132 GVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLET 191
GV DADI + L +F+ V V+H A+ ++ + + + + N+ G ++E
Sbjct: 53 GVQYHDADITNAERLVSVFDEVRPDVVIHTASPLAQGNSVVHRDIFYKVNVEGTRTVVEA 112
Query: 192 CKSSDPQPAIVWASSSSVYG--VNKKVPFSEK---DRTDQPASLYAATKKAGEAIAHAYN 246
CK + + A+V+ SS+SV V+ + E+ R D+ Y+ TK E I N
Sbjct: 113 CKKAGVK-ALVFTSSASVISDNVSDLINADERWPMIRGDKQTEYYSDTKAEAEEIVLKAN 171
Query: 247 HIYGLSITGLRFFTVYG 263
L +R ++G
Sbjct: 172 EPGKLLTAAIRPSGIFG 188
Score = 61 (26.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 380 NISLAQRELGYMPTTDLETGLKKFVRWYL 408
NI+ A++ LGY P +E G+++ V++ L
Sbjct: 332 NITKAKQRLGYAPIVSMEEGVRRGVQYIL 360
>WB|WBGene00022616 [details] [associations]
symbol:hsd-3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:FO081547 RefSeq:NP_508852.3 ProteinModelPortal:A4UVJ7
EnsemblMetazoa:ZC449.6 GeneID:260026 KEGG:cel:CELE_ZC449.6
CTD:260026 WormBase:ZC449.6 HOGENOM:HOG000266975 InParanoid:A4UVJ7
OMA:IVVDPNP NextBio:952782 Uniprot:A4UVJ7
Length = 359
Score = 134 (52.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 52/192 (27%), Positives = 87/192 (45%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGV--LGLDNFNNYYETSLKKARKGLLE-RAGVFVIDAD 139
++TG GF+G+H+ AL+K GD + +D S K L+E G F+
Sbjct: 8 VITGGGGFLGAHLIAALQKNGDRTKCIVVDPNPRLSHFSAIDFDKSLVEYEKGSFL---- 63
Query: 140 INDKSLLDKIF-NVVAFTHVMHLAAQAGVR-YAMQNPNSYVES-NIAGFVNLLETCKSSD 196
D+ +L+++ N + V HL A + Q YV + N+ G L+E CK
Sbjct: 64 --DRKVLERVLPNAIT---VFHLCAIGHTGWFGAQKHREYVYAFNVTGTKFLIEKCKFFG 118
Query: 197 PQPAIVWASSSSVYGVNKKVPFSEKDRT----DQPASLYAATKKAGEAIAHAYNHIYGLS 252
P +++SS +V V K + ++ + +Y+++K EA + + I
Sbjct: 119 V-PRFIYSSSIAVVFVGKPIYNCDESEPYPLKSEYLDIYSSSKAEAEAFVRSQSTIQ-FK 176
Query: 253 ITGLRFFTVYGP 264
T LRF +YGP
Sbjct: 177 TTCLRFRAIYGP 188
Score = 46 (21.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/54 (37%), Positives = 25/54 (46%)
Query: 346 VSRLVSLLEKILKVKAETKVLPLPR-NGDVQFTHANISL--AQRELGYMPTTDL 396
VS VSL L K P+ R +V T S+ A+RELGY P +L
Sbjct: 298 VSTFVSL-SSYLCYKIFNSSPPMTRFELEVLITDNTYSIEKARRELGYCPEQNL 350
>RGD|1308676 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA;ISO;IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISO;IDA] [GO:0005496 "steroid binding"
evidence=IPI] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006082 "organic
acid metabolic process" evidence=IEP] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISO] [GO:0006701 "progesterone
biosynthetic process" evidence=IEP;IDA] [GO:0006703 "estrogen
biosynthetic process" evidence=IEP] [GO:0008202 "steroid metabolic
process" evidence=IDA] [GO:0008207 "C21-steroid hormone metabolic
process" evidence=IDA] [GO:0008584 "male gonad development"
evidence=IEP] [GO:0008585 "female gonad development" evidence=IEP]
[GO:0009635 "response to herbicide" evidence=IEP] [GO:0010033
"response to organic substance" evidence=IEP] [GO:0010038 "response
to metal ion" evidence=IEP] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0010288 "response to lead ion" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0014823 "response to activity" evidence=IEP] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016101 "diterpenoid
metabolic process" evidence=IEP] [GO:0017143 "insecticide metabolic
process" evidence=IEP] [GO:0018879 "biphenyl metabolic process"
evidence=IEP] [GO:0018894 "dibenzo-p-dioxin metabolic process"
evidence=IEP] [GO:0018958 "phenol-containing compound metabolic
process" evidence=IEP] [GO:0018970 "toluene metabolic process"
evidence=IEP] [GO:0021766 "hippocampus development" evidence=IEP]
[GO:0030061 "mitochondrial crista" evidence=IDA] [GO:0030325
"adrenal gland development" evidence=IEP] [GO:0030728 "ovulation"
evidence=IEP] [GO:0030851 "granulocyte differentiation"
evidence=IEP] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032355 "response to estradiol stimulus"
evidence=IEP] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEP] [GO:0033197 "response to vitamin E" evidence=IEP]
[GO:0033327 "Leydig cell differentiation" evidence=IEP] [GO:0033591
"response to L-ascorbic acid" evidence=IEP] [GO:0035410
"dihydrotestosterone 17-beta-dehydrogenase activity" evidence=IDA]
[GO:0042493 "response to drug" evidence=IEP] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0043279 "response to alkaloid" evidence=IEP] [GO:0044344
"cellular response to fibroblast growth factor stimulus"
evidence=IEP] [GO:0045471 "response to ethanol" evidence=IEP]
[GO:0046470 "phosphatidylcholine metabolic process" evidence=IEP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0046686 "response to cadmium ion" evidence=IEP]
[GO:0050756 "fractalkine metabolic process" evidence=IEP]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] [GO:0051592 "response to
calcium ion" evidence=IEP] [GO:0060135 "maternal process involved
in female pregnancy" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0061370 "testosterone biosynthetic
process" evidence=IEP] [GO:0070301 "cellular response to hydrogen
peroxide" evidence=IEP] [GO:0070542 "response to fatty acid"
evidence=IEP] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071288 "cellular response to mercury ion"
evidence=IEP] [GO:0071320 "cellular response to cAMP" evidence=IEP]
[GO:0071333 "cellular response to glucose stimulus" evidence=IEP]
[GO:0071371 "cellular response to gonadotropin stimulus"
evidence=IEP] [GO:0071372 "cellular response to
follicle-stimulating hormone stimulus" evidence=IEP] [GO:0071373
"cellular response to luteinizing hormone stimulus" evidence=IEP]
[GO:0071406 "cellular response to methylmercury" evidence=IEP]
[GO:0071549 "cellular response to dexamethasone stimulus"
evidence=IEP] [GO:0071560 "cellular response to transforming growth
factor beta stimulus" evidence=IEP] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:1308676 GO:GO:0016021
GO:GO:0046686 GO:GO:0021766 CTD:3283 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0004769 GO:GO:0006703 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:M38178 EMBL:BC086578 EMBL:DQ515797 IPI:IPI00362470 PIR:A39051
RefSeq:NP_001007720.3 UniGene:Rn.128814 ProteinModelPortal:P22071
STRING:P22071 Ensembl:ENSRNOT00000026325 GeneID:360348
KEGG:rno:360348 UCSC:RGD:1308676 InParanoid:P22071 OMA:WVFPRIA
BRENDA:5.3.3.1 NextBio:672781 ArrayExpress:P22071
Genevestigator:P22071 GermOnline:ENSRNOG00000019454 GO:GO:0030061
GO:GO:0035410 GO:GO:0051287 GO:GO:0005496 GO:GO:0030325
GO:GO:0018879 GO:GO:0071236 GO:GO:0071320 GO:GO:0071549
GO:GO:0044344 GO:GO:0071372 GO:GO:0071333 GO:GO:0070301
GO:GO:0032869 GO:GO:0071373 GO:GO:0071288 GO:GO:0071406
GO:GO:0071560 GO:GO:0018894 GO:GO:0016101 GO:GO:0008585
GO:GO:0050756 GO:GO:0030851 GO:GO:0017143 GO:GO:0033327
GO:GO:0060135 GO:GO:0006082 GO:GO:0030728 GO:GO:0018958
GO:GO:0046470 GO:GO:0006701 GO:GO:0014823 GO:GO:0043279
GO:GO:0046685 GO:GO:0051592 GO:GO:0051412 GO:GO:0042493
GO:GO:0032355 GO:GO:0045471 GO:GO:0070542 GO:GO:0060992
GO:GO:0009635 GO:GO:0033591 GO:GO:0010288 GO:GO:0010226
GO:GO:0033197 GO:GO:0061370 GO:GO:0018970 Uniprot:P22071
Length = 373
Score = 128 (50.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 49/175 (28%), Positives = 80/175 (45%)
Query: 79 GLTVLVTGAAGFVGSHV--SLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI 136
G + LVTGA GFVG + L +K V LD + K+ L +A V ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
+ DI D L + ++ V+H AA V + + + ++ N+ G N+LE C +
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTAAVIDVSHVLPR-QTILDVNLKGTQNILEACVEAS 116
Query: 197 PQPAIVWASSSSVYGVN--KKVPFS--EKDRTDQPAS-LYAATKKAGEAIAHAYN 246
PA ++ S+ V G N KK+ + E++ + S Y +K+ E A N
Sbjct: 117 V-PAFIYCSTVDVAGPNSYKKIILNGHEEEHHESTWSDAYPYSKRMAEKAVLAAN 170
Score = 53 (23.7 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
AQR+LGY+P E +K W
Sbjct: 334 AQRDLGYVPLVSWEEAKQKTSEW 356
>MGI|MGI:96233 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 1" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=ISO]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96233 GO:GO:0016021 GO:GO:0005739
CTD:3283 eggNOG:COG0451 HOVERGEN:HBG000014 KO:K00070 GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 EMBL:M58567
EMBL:BC052659 IPI:IPI00229070 PIR:I49762 RefSeq:NP_032319.1
UniGene:Mm.140811 ProteinModelPortal:P24815 SMR:P24815
STRING:P24815 PhosphoSite:P24815 PaxDb:P24815 PRIDE:P24815
Ensembl:ENSMUST00000107016 GeneID:15492 KEGG:mmu:15492
InParanoid:P24815 OMA:MAGWSCL SABIO-RK:P24815 NextBio:288366
Bgee:P24815 Genevestigator:P24815 GermOnline:ENSMUSG00000027871
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 Uniprot:P24815
Length = 373
Score = 128 (50.1 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 51/175 (29%), Positives = 77/175 (44%)
Query: 79 GLTVLVTGAAGFVGSHV--SLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI 136
G + LVTGA GFVG + L +K V LD + K+ L + V V+
Sbjct: 3 GWSCLVTGAGGFVGQRIIKMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKTKVTVL 59
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
+ DI D L + ++ V+H AA V + + ++ N+ G NLLE C +
Sbjct: 60 EGDILDAQCLRRACQGISV--VIHTAAVIDVTGVIPR-QTILDVNLKGTQNLLEACVQAS 116
Query: 197 PQPAIVWASSSSVYGVN--KKVPFS---EKDRTDQPASLYAATKKAGEAIAHAYN 246
PA ++ SS V G N KK+ + E++ + Y +KK E A N
Sbjct: 117 V-PAFIFCSSVDVAGPNSYKKIVLNGHEEQNHESTWSDPYPYSKKMAEKAVLAAN 170
Score = 51 (23.0 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
AQR+LGY P + E +K W
Sbjct: 334 AQRDLGYEPLVNWEEAKQKTSEW 356
>WB|WBGene00010166 [details] [associations]
symbol:gmd-2 species:6239 "Caenorhabditis elegans"
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA;IDA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;IDA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0008831 "dTDP-4-dehydrorhamnose reductase
activity" evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0018991
"oviposition" evidence=IMP] [GO:0042350 "GDP-L-fucose biosynthetic
process" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/184 (27%), Positives = 86/184 (46%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKG--LLERAGV-FVID-A 138
L+TG G GS+++ L +G V G+ ++ + T+ + G + F +
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNGSASFSLHYG 96
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLET---CKSS 195
D+ D S L K+ + + T + HLAAQ+ V+ + P E + G + LL+ C+ +
Sbjct: 97 DMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRLT 156
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
+ + AS+S +YG +++P SE P S YA K G I Y Y + +
Sbjct: 157 E-KVRFYQASTSELYGKVQEIPQSELTPF-YPRSPYAVAKMYGYWIVVNYREAYKMFACN 214
Query: 255 GLRF 258
G+ F
Sbjct: 215 GILF 218
>UNIPROTKB|O45583 [details] [associations]
symbol:gmd-2 "GDP-mannose 4,6 dehydratase 2" species:6239
"Caenorhabditis elegans" [GO:0019673 "GDP-mannose metabolic
process" evidence=IDA] [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=IDA] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0040007
GO:GO:0018991 GO:GO:0002119 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0010171 GO:GO:0040011 GO:GO:0005622
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 GO:GO:0042350 OMA:DAIRDWG EMBL:Z81553
EMBL:AM231685 PIR:T22798 RefSeq:NP_493106.1 UniGene:Cel.18597
ProteinModelPortal:O45583 SMR:O45583 STRING:O45583 PaxDb:O45583
EnsemblMetazoa:F56H6.5 GeneID:186416 KEGG:cel:CELE_F56H6.5
UCSC:F56H6.5 CTD:186416 WormBase:F56H6.5 InParanoid:O45583
NextBio:931756 Uniprot:O45583
Length = 382
Score = 138 (53.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 50/184 (27%), Positives = 86/184 (46%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKG--LLERAGV-FVID-A 138
L+TG G GS+++ L +G V G+ ++ + T+ + G + F +
Sbjct: 37 LITGITGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHLYGNPVTHNGSASFSLHYG 96
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLET---CKSS 195
D+ D S L K+ + + T + HLAAQ+ V+ + P E + G + LL+ C+ +
Sbjct: 97 DMTDSSCLIKLISTIEPTEIYHLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIHACRLT 156
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
+ + AS+S +YG +++P SE P S YA K G I Y Y + +
Sbjct: 157 E-KVRFYQASTSELYGKVQEIPQSELTPF-YPRSPYAVAKMYGYWIVVNYREAYKMFACN 214
Query: 255 GLRF 258
G+ F
Sbjct: 215 GILF 218
>GENEDB_PFALCIPARUM|PF10_0137 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase,
putative" species:5833 "Plasmodium falciparum" [GO:0016491
"oxidoreductase activity" evidence=ISS] [GO:0016857 "racemase and
epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=ISS]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0016491 GO:GO:0006486
EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 55/239 (23%), Positives = 99/239 (41%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID--ADI 140
LVTG G +GS + +K ++ + N S K ++ + +F+ D+
Sbjct: 6 LVTGGTGLLGSSLREVIKNENKNII--EKENEIIVNS--NENKNIITKY-IFLSSEMCDL 60
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPN-SYVESNIAGFVNLLETCKSSDPQP 199
D +F FT ++H AA G YA +N N ++ +N+ +N+++ C
Sbjct: 61 KDYDKSKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISR 120
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTD----QPASLYAATKKAGEAIAHAYNHIYGLSITG 255
I + S+ ++ VN +P +E+ D Q Y+ +K+ E + Y Y
Sbjct: 121 GI-FTLSTCIFPVNCSLPLTEEKIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWIC 179
Query: 256 LRFFTVYGPWGRPDMAYFFFTRDII------RGKRITVYEAPDGASVARDFTYIDDIVK 308
+ +YG + ++ II + VY DG++V R F Y D+ K
Sbjct: 180 IIPTNIYGKYDNFNLENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAV-RQFIYNIDVNK 237
>UNIPROTKB|Q8IJQ5 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006486 "protein
glycosylation" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0016491
GO:GO:0006486 EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 134 (52.2 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 55/239 (23%), Positives = 99/239 (41%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID--ADI 140
LVTG G +GS + +K ++ + N S K ++ + +F+ D+
Sbjct: 6 LVTGGTGLLGSSLREVIKNENKNII--EKENEIIVNS--NENKNIITKY-IFLSSEMCDL 60
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPN-SYVESNIAGFVNLLETCKSSDPQP 199
D +F FT ++H AA G YA +N N ++ +N+ +N+++ C
Sbjct: 61 KDYDKSKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISR 120
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTD----QPASLYAATKKAGEAIAHAYNHIYGLSITG 255
I + S+ ++ VN +P +E+ D Q Y+ +K+ E + Y Y
Sbjct: 121 GI-FTLSTCIFPVNCSLPLTEEKIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWIC 179
Query: 256 LRFFTVYGPWGRPDMAYFFFTRDII------RGKRITVYEAPDGASVARDFTYIDDIVK 308
+ +YG + ++ II + VY DG++V R F Y D+ K
Sbjct: 180 IIPTNIYGKYDNFNLENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAV-RQFIYNIDVNK 237
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 131 (51.2 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 61/237 (25%), Positives = 102/237 (43%)
Query: 82 VLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
++VTG AGF+GS++ AL +G +L +DN LK K FV D+
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDN--------LKDGTK--------FVNLVDL 45
Query: 141 NDKSLLDK---IFNVVA---FTHVMHLAAQAGVRYAMQNPNSYV-ESNIAGFVNLLETCK 193
N +DK + ++A F V + + + Y+ ++N LL C
Sbjct: 46 NIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCL 105
Query: 194 SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSI 253
+ P ++ASS++ YG + F E ++P ++Y +K + I
Sbjct: 106 EREI-P-FLYASSAATYG-GRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQI 162
Query: 254 TGLRFFTVYGPW-G-RPDMAY--FFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306
G R+F VYGP G + MA F + G+ ++E + + RDF Y+ D+
Sbjct: 163 VGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSE--NFKRDFVYVGDV 217
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 74/324 (22%), Positives = 137/324 (42%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+LVTG AG+VGS + L + G V D + + L K E + +++ DI
Sbjct: 8 ILVTGGAGYVGSALVPQLLELGYRVTVYDTLF-FGDDFLPK------ENPYLNIVEGDIR 60
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAG-VRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
D L + F V+ LA + + + S N+ F +++ K++ +
Sbjct: 61 DTERLKQCFKDA--DAVISLACISNDASFELDETLS-TSINLEAFEPMVKAAKAAGVK-R 116
Query: 201 IVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFT 260
++ASSSSVYGV++ +E+ P +LY K E + + + +T +R T
Sbjct: 117 FIYASSSSVYGVSETKDVTEEHPL-VPLTLYNKYKGMCEPLLFKHQSPEFVCVT-IRPAT 174
Query: 261 V--YGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAX 318
+ Y P R D++ T + +ITV+ G S R ++ D+ C D
Sbjct: 175 LCGYAPRQRLDLSVNILTNHAVNNNKITVF----GGSQLRPNLHVQDM---C----DLYK 223
Query: 319 XXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLV-SLLEKILKVKAETKVLPLPRNGDVQFT 377
F + N + + ++ +V +++E+ KA ++ P + D++
Sbjct: 224 LLLVVPDEKIAGETFNV-GYENKSIMEIAHIVKNIVEEEFPEKAPIDIVTAPTD-DIRSY 281
Query: 378 HANISLAQRELGYMPTTDLETGLK 401
H N +R LG+ +E ++
Sbjct: 282 HINSDKIKRCLGFEAKYSIEDAVR 305
>FB|FBgn0031661 [details] [associations]
symbol:Gmd "GDP-mannose 4,6-dehydratase" species:7227
"Drosophila melanogaster" [GO:0008446 "GDP-mannose 4,6-dehydratase
activity" evidence=ISS;IDA] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0005622 "intracellular"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=IMP] [GO:2000035 "regulation of
stem cell division" evidence=IMP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:AE014134 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0007219 GO:GO:0005622 GO:GO:2000035
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
GO:GO:0042350 CTD:33716 EMBL:AM231687 EMBL:AY089519
RefSeq:NP_608888.2 UniGene:Dm.4967 ProteinModelPortal:Q9VMW9
SMR:Q9VMW9 STRING:Q9VMW9 PaxDb:Q9VMW9 EnsemblMetazoa:FBtr0079049
GeneID:33716 KEGG:dme:Dmel_CG8890 FlyBase:FBgn0031661
InParanoid:Q9VMW9 OrthoDB:EOG40K6FB PhylomeDB:Q9VMW9
GenomeRNAi:33716 NextBio:784930 Bgee:Q9VMW9 GermOnline:CG8890
Uniprot:Q9VMW9
Length = 395
Score = 130 (50.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 69/267 (25%), Positives = 114/267 (42%)
Query: 55 RRHSSGGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGL----D 110
R SS ++ ++ +R L+TG G GS+++ L K+ V G+
Sbjct: 22 RPESSSNGSKDQNGTEAGAEGDSRDKVALITGITGQDGSYLAEFLLKKDYEVHGIIRRAS 81
Query: 111 NFNNYYETSL---KKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGV 167
FN L KA KG R + D+ D S L KI N+V T + +LAAQ+ V
Sbjct: 82 TFNTTRIEHLYADPKAHKG--GRMKLHY--GDMTDSSSLVKIINMVKPTEIYNLAAQSHV 137
Query: 168 RYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVW--ASSSSVYGVNKKVPFSEKDRTD 225
+ + E + G + +L+ ++ + + + AS+S +YG K V + ++T
Sbjct: 138 KVSFDLSEYTAEVDAVGTLRILDAIRTCGMEKNVRFYQASTSELYG--KVVETPQNEQTP 195
Query: 226 -QPASLYAATKKAGEAIAHAYNHIYGL-SITGLRFFTVYGPWGRPDMAYFFFTRDI--IR 281
P S YA K G I Y Y + + G+ F P + TR + I
Sbjct: 196 FYPRSPYACAKMYGFWIVINYREAYNMYACNGI-LFNHESPRRGENFVTRKITRSVAKIY 254
Query: 282 GKRITVYEAPDGASVARDFTYIDDIVK 308
K++ +E + S RD+ + D V+
Sbjct: 255 HKQMEYFELGNLDS-KRDWGHASDYVE 280
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 96 (38.9 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 51/195 (26%), Positives = 81/195 (41%)
Query: 156 THVMHLAAQA-GVRYAMQNPNSYVESNIAGFVNLLETC-KSSDPQPAIVWASSSSVYGVN 213
T V H A+ G+ Y + Y N+ G L+E C K Q +V+ SSSSV
Sbjct: 65 TTVFHTASPTHGMGYDI-----YYSVNVIGTERLIEACIKCGVKQ--LVYTSSSSVVFNG 117
Query: 214 KKVPFSEKDR--TDQPASLYAATKKAGE-AIAHAYNHIYGLSITGLRFFTVYGPWGRPDM 270
K + ++ D+ Y TK+ GE A+ A L + LR ++GP R
Sbjct: 118 KDIVNGDETLPYVDKHIDPYNKTKELGERAVLKAKGS--NLLVCALRPAGIFGP--REVQ 173
Query: 271 AYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXP 330
+ F + GK ++ DG ++ D+TYID++V + D P
Sbjct: 174 GWPQFLKAAKEGKNKFMFG--DGNNLC-DWTYIDNVVHAHILAADNMTTNS--------P 222
Query: 331 AEFRIFNLGNTTPVP 345
++ + N P+P
Sbjct: 223 ISGSVYFITNDEPIP 237
Score = 65 (27.9 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 12/29 (41%), Positives = 17/29 (58%)
Query: 380 NISLAQRELGYMPTTDLETGLKKFVRWYL 408
NI A++EL Y P L G++K W+L
Sbjct: 302 NIEKAKKELKYKPIVSLRDGMEKTKEWFL 330
Score = 47 (21.6 bits), Expect = 1.8e-05, Sum P(3) = 1.8e-05
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 83 LVTGAAGFVGSHVSLALKKRGD 104
LV G GF+G ++ +L RG+
Sbjct: 6 LVVGGCGFLGRYIVESLLARGE 27
>UNIPROTKB|Q3MHF2 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016853 "isomerase activity" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
CTD:80270 KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0016853
EMBL:DAAA02057919 EMBL:BC105259 EMBL:BT030700 IPI:IPI00692623
RefSeq:NP_001029868.1 UniGene:Bt.7734 STRING:Q3MHF2
Ensembl:ENSBTAT00000003028 GeneID:540229 KEGG:bta:540229
InParanoid:Q3MHF2 NextBio:20878503 Uniprot:Q3MHF2
Length = 368
Score = 124 (48.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 64/241 (26%), Positives = 105/241 (43%)
Query: 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI 136
T+ L LVTG GF+G HV L +R + L F+ + L++ + G ++ V I
Sbjct: 7 TQELVYLVTGGCGFLGEHVVRMLLQREPRLRELRIFDLHLGPWLEELKTGPVQ---VTAI 63
Query: 137 DADINDKSLLDKIFNVVAFTHVM-HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
D+ ++ VA HV+ H A V + +P + E N+ G N++E C +
Sbjct: 64 QGDVTQAH---EVAAAVAGAHVVIHTAGLVDV-FGKTSPETIHEVNVQGTQNVIEACVQT 119
Query: 196 DPQPAIVWASSSSVYGVN-KKVPFSE-KDRTDQPA---SLYAATKKAGEAI---AHAYNH 247
+ +++ SS V G N K PF + T A Y +K E + A+
Sbjct: 120 GTR-FLIYTSSMEVVGPNIKGQPFYRGNENTPYEAVHRHPYPCSKALAEQLVLEANGREV 178
Query: 248 IYGLSIT--GLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305
+ GL + LR +YG G M F+ + + G R+ + A ASV Y+ +
Sbjct: 179 LGGLPLVTCALRPTGIYGE-GHQIMRDFYH-QGLRLGGRL--FRAIP-ASVEHGRVYVGN 233
Query: 306 I 306
+
Sbjct: 234 V 234
Score = 46 (21.3 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 384 AQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
A+R GY P E + +RW + SA
Sbjct: 338 ARRHFGYEPLFSWEESRTRTIRWVQTVEGSA 368
>UNIPROTKB|I3L2H6 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 EMBL:AC135048 HGNC:HGNC:18324 GO:GO:0047016
GO:GO:0001558 Ensembl:ENST00000574447 Bgee:I3L2H6 Uniprot:I3L2H6
Length = 176
Score = 118 (46.6 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 44/150 (29%), Positives = 68/150 (45%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
L LVTG GF+G HV L +R + L F+ + L++ + G + V I D
Sbjct: 10 LVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVR---VTAIQGD 66
Query: 140 INDKSLLDKIFNVVAFTHVM-HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+ ++ VA HV+ H A V + +P + E N+ G N++E C + +
Sbjct: 67 VTQAH---EVAAAVAGAHVVIHTAGLVDV-FGRASPKTIHEVNVQGTRNVIEACVQTGTR 122
Query: 199 PAIVWASSSSVYGVNKKV-PFSEKDRTDQP 227
+V+ SS V G N K PF + D P
Sbjct: 123 -FLVYTSSMEVVGPNTKGHPFY-RGNEDTP 150
>TIGR_CMR|CBU_0688 [details] [associations]
symbol:CBU_0688 "GDP-fucose synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009242 "colanic acid biosynthetic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GenomeReviews:AE016828_GR
GO:GO:0044237 HOGENOM:HOG000168011 HSSP:P32055 EMBL:AF387640
ProteinModelPortal:Q93N55 PATRIC:17930059 ProtClustDB:CLSK914241
BioCyc:CBUR227377:GJ7S-686-MONOMER Uniprot:Q93N55
Length = 332
Score = 119 (46.9 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 66/301 (21%), Positives = 121/301 (40%)
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAG-VRYAMQNPNSYVESNIAGFVNLLETCKSS 195
+ D+ +K + + F +V AA+ G + + +P ++ N+A N++E
Sbjct: 39 ELDLTNKEKVFEFFANNCPEYVFLAAARVGGINDSNLHPVDFIRDNLAIQWNVIEASFRY 98
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSE----KDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
+ +++ SS +Y + P E + + Y+ K AG AYN Y
Sbjct: 99 KVK-RLLFLGSSCIYSNDAPRPLKEIYFNSGKLEPTNRAYSTAKIAGIEHCWAYNRQYKT 157
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDII-RGKRITVYEAPD----GASVA-RDFTYIDD 305
++GP D+ +I + + + P+ G+ A R+F Y DD
Sbjct: 158 QYLCAMPTNLFGPNDNYDLENGHVVASLISKIHQAKEQKKPNFVLWGSGKAKREFLYSDD 217
Query: 306 IVKGC--LAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363
+ + C L L P I N+G+ + + L L++ I+ + +
Sbjct: 218 LAEACCHLMNLPDDIVKSVFGQDDQPP----IVNIGSGKEISIYELALLIQDIIGYQGD- 272
Query: 364 KVLPLPRNGDVQFTHA-NISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSASASPSRKK 422
++ D T ++SL Q LG+ L +G+KK ++YLSY A A +K
Sbjct: 273 -IIWDHSKPDGALTKVMDVSLMQY-LGWSAREGLVSGIKKTYQYYLSYERQAIAIEGIEK 330
Query: 423 N 423
N
Sbjct: 331 N 331
Score = 48 (22.0 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 82 VLVTGAAGFVGSHVSLALKKRG 103
+ VTG G GS + LKK+G
Sbjct: 7 IFVTGHRGLAGSAILRRLKKQG 28
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 97 (39.2 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 33/133 (24%), Positives = 59/133 (44%)
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPN-SYVESNIAGFVNLLETCKSS 195
DAD+ + + +F THV+HLAA G + N N ++ +N+ N+L+T
Sbjct: 38 DADLTNLAATQALFAREKPTHVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQ 97
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEK---DRTDQPASL-YAATKKAGEAIAHAYNHIYGL 251
+V S+ ++ P E + P++ Y+ K+ + HAY+ YG
Sbjct: 98 GCVK-VVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNYGYSYAKRLIDVQNHAYHDKYGR 156
Query: 252 SITGLRFFTVYGP 264
T + ++GP
Sbjct: 157 VYTSVIPCNIFGP 169
Score = 61 (26.5 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 15/44 (34%), Positives = 22/44 (50%)
Query: 371 NGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
+G + T +N L Y TDLET + V+WY+ Y+ A
Sbjct: 277 DGQYKKTASNAKLRSFLPDYA-FTDLETAINASVKWYIENYDQA 319
Score = 46 (21.3 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 82 VLVTGAAGFVGSHVSLALKKR 102
VLVTG G VG + +K++
Sbjct: 4 VLVTGGTGLVGKALEAVIKEQ 24
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 62/247 (25%), Positives = 106/247 (42%)
Query: 82 VLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNN--YYETSLKKARKGLLERAGVFVIDA 138
++VTG AG +GS++ AL +RG +L +D+ N ++ + ++R
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLVDLQIADYMDRDDFLAQIM 61
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+D +D IF+ A + + +Y M N Y + LL C D +
Sbjct: 62 AGDDFGFIDAIFHEGACS----ATTEWDGKYVMLNNYEYSKE-------LLHYCL--DRE 108
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAH-----AYNHIYGLS- 252
++ASS++ YG F E+ + + ++Y +K+ + A H LS
Sbjct: 109 IPFLYASSAATYGETDT--FIEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETLSQ 166
Query: 253 ITGLRFFTVYGP--WGRPDMAY--FFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308
ITG R+F VYGP + MA F + G+ ++ + + RDF Y+ D+
Sbjct: 167 ITGFRYFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSE--NFKRDFVYVGDVAA 224
Query: 309 GCLAGLD 315
L LD
Sbjct: 225 VNLWFLD 231
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 62/247 (25%), Positives = 106/247 (42%)
Query: 82 VLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNN--YYETSLKKARKGLLERAGVFVIDA 138
++VTG AG +GS++ AL +RG +L +D+ N ++ + ++R
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLVDLQIADYMDRDDFLAQIM 61
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+D +D IF+ A + + +Y M N Y + LL C D +
Sbjct: 62 AGDDFGFIDAIFHEGACS----ATTEWDGKYVMLNNYEYSKE-------LLHYCL--DRE 108
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAH-----AYNHIYGLS- 252
++ASS++ YG F E+ + + ++Y +K+ + A H LS
Sbjct: 109 IPFLYASSAATYGETDT--FIEEPQYEGALNVYGYSKQQFDNYVRRLWLDAKQHDETLSQ 166
Query: 253 ITGLRFFTVYGP--WGRPDMAY--FFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308
ITG R+F VYGP + MA F + G+ ++ + + RDF Y+ D+
Sbjct: 167 ITGFRYFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSE--NFKRDFVYVGDVAA 224
Query: 309 GCLAGLD 315
L LD
Sbjct: 225 VNLWFLD 231
>TAIR|locus:2155036 [details] [associations]
symbol:GMD1 ""GDP-D-mannose 4,6-dehydratase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=ISM] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IEA;ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AB022211 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 EMBL:AF195140
IPI:IPI00517362 RefSeq:NP_201429.1 UniGene:At.46822
ProteinModelPortal:Q9SNY3 SMR:Q9SNY3 IntAct:Q9SNY3 STRING:Q9SNY3
PaxDb:Q9SNY3 PRIDE:Q9SNY3 EnsemblPlants:AT5G66280.1 GeneID:836760
KEGG:ath:AT5G66280 TAIR:At5g66280 InParanoid:Q9SNY3
PhylomeDB:Q9SNY3 ProtClustDB:PLN02653 Genevestigator:Q9SNY3
GermOnline:AT5G66280 Uniprot:Q9SNY3
Length = 361
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 57/190 (30%), Positives = 87/190 (45%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFN----NYYETSLKKARKGLLERAGVF 134
LVTG G GS+++ L ++G V GL NFN N+ K L++
Sbjct: 20 LVTGITGQDGSYLTEFLLEKGYEVHGLIRRSSNFNTQRLNHIYVDPHNVNKALMK----- 74
Query: 135 VIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS 194
+ D++D S L + +V+ V +LAAQ+ V + + P+ + G + LLE +S
Sbjct: 75 LHYGDLSDASSLRRWLDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 134
Query: 195 S--DPQPAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIY 249
D AI + A SS ++G P + + T P S YAA+K A Y Y
Sbjct: 135 HNIDNGRAIKYYQAGSSEMFG---STPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 191
Query: 250 GL-SITGLRF 258
GL + G+ F
Sbjct: 192 GLYACNGILF 201
>ASPGD|ASPL0000035041 [details] [associations]
symbol:AN3119 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:BN001306 EMBL:AACD01000051 GO:GO:0044237 RefSeq:XP_660723.1
ProteinModelPortal:Q5B8L1 EnsemblFungi:CADANIAT00009957
GeneID:2873998 KEGG:ani:AN3119.2 HOGENOM:HOG000218208 OMA:WFASPRS
OrthoDB:EOG41NXW0 Uniprot:Q5B8L1
Length = 316
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 58/204 (28%), Positives = 88/204 (43%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADI 140
+L+TGAAGF+G ++ L L L + N +K + A + +
Sbjct: 3 ILITGAAGFIGQLLARELLNDPSYTLVLTDINEPPIPAGVKYPQNARTVTADLVKAADTV 62
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
DKSL D ++ AF +M ++A M N+ LLE +++ P
Sbjct: 63 VDKSL-DAVY---AFHGIMSSGSEANFDLGMT-------VNVDATRKLLEALRATCPGVR 111
Query: 201 IVWASSSSVYGVNKKVPFSEKDRT-DQPASLYAATKKAGEAIAHAYNHIYGLSITG--LR 257
++++SS +VYG + +P D P S Y A K E + + Y G ITG LR
Sbjct: 112 VIYSSSQAVYG--QPLPEVVDDTVIPTPQSSYGAEKLICETLVNEYTR-RGF-ITGFTLR 167
Query: 258 FFTVYGPWGRPDMAYFFFTRDIIR 281
F T+ GRP A F +IR
Sbjct: 168 FPTISVRPGRPTAAASSFLSGMIR 191
>TIGR_CMR|CPS_4199 [details] [associations]
symbol:CPS_4199 "GDP-mannose 4,6-dehydratase"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0019673
eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 RefSeq:YP_270850.1
ProteinModelPortal:Q47WH2 SMR:Q47WH2 STRING:Q47WH2 GeneID:3519434
KEGG:cps:CPS_4199 PATRIC:21471261 ProtClustDB:CLSK589180
BioCyc:CPSY167879:GI48-4209-MONOMER Uniprot:Q47WH2
Length = 374
Score = 126 (49.4 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 48/181 (26%), Positives = 81/181 (44%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLLERAGVFVID-ADI 140
L+TG G GS+++ L ++G V G+ ++ T + + E+ F + D+
Sbjct: 8 LITGITGQDGSYLAELLLEKGYEVHGIKRRSSSLNTERIDHIYQDNHEKNQKFFLHYGDL 67
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK--SSDPQ 198
D S L +I V V +L AQ+ V + + P + + G + LLE + + +
Sbjct: 68 TDSSNLTRILKDVQPDEVYNLGAQSHVAVSFECPEYTADVDAIGTLRLLEAIRFLGLEKK 127
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL-SITGLR 257
AS+S +YG +++P SE P S YA K I Y YG+ + G+
Sbjct: 128 TKFYQASTSELYGEVQEIPQSETTPF-HPRSPYAVAKMYAYWIVVNYRESYGMYACNGIL 186
Query: 258 F 258
F
Sbjct: 187 F 187
>DICTYBASE|DDB_G0270184 [details] [associations]
symbol:ger "GDP-keto-6-deoxymannose 3,5-
epimerase/4-reductase" species:44689 "Dictyostelium discoideum"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0270184
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
RefSeq:XP_646604.1 HSSP:P32055 ProteinModelPortal:Q55C77
STRING:Q55C77 EnsemblProtists:DDB0305155 GeneID:8617576
KEGG:ddi:DDB_G0270184 InParanoid:Q55C77 ProtClustDB:CLSZ2431446
Uniprot:Q55C77
Length = 320
Score = 115 (45.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 57/288 (19%), Positives = 112/288 (38%)
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYA-MQNPNSYVESNIAGFVNLLETCKSS 195
D D+ + F + THV+HLAA+ G ++ M+ + NI N+L CK
Sbjct: 44 DCDLKSRESTRSYFEKIKPTHVIHLAARVGGLFSNMKYKVEFFRENIDINDNVLACCKEF 103
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEK---DRTDQPASL-YAATKKAGEAIAHAYNHIYGL 251
+ + S+ ++ P E + P++ YA K+ + + AYN YG
Sbjct: 104 NVVKCVS-CLSTCIFPDKTTYPIDETMIHNGPPHPSNEGYAYAKRMIDVLNRAYNEEYGC 162
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPD----GASVA-RDFTYIDDI 306
T + +YGP + +I + + D G R F Y D+
Sbjct: 163 KFTSVIPTNIYGPHDNYHLTDGHVIPGLIHKTYLAMKNNQDLTIMGTGKPLRQFIYSYDL 222
Query: 307 VKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVL 366
K + L+ P I ++G + ++ + L+ + ++ K +
Sbjct: 223 AKYFVWTLNN--------YEEMSPL---ILSVGEEDEISIADVARLITEAMEFKGKLIFD 271
Query: 367 PLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
+G + T +N+ L + + T ++ +K+ +W++ Y +A
Sbjct: 272 TSKADGQYKKTASNLKLKSL-VPDLTFTPIQQAIKESCQWFIDNYETA 318
Score = 50 (22.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 76 STRGLTVLVTGAAGFVGSHVSLALKK 101
+T TVLVTG +G VG + +K+
Sbjct: 4 TTSKRTVLVTGGSGLVGKGIEKYVKE 29
>MGI|MGI:109598 [details] [associations]
symbol:Hsd3b6 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 6" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=ISO] [GO:0004769 "steroid delta-isomerase activity"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0006700 "C21-steroid
hormone biosynthetic process" evidence=ISO] [GO:0006702 "androgen
biosynthetic process" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0034757 "negative regulation of iron ion transport"
evidence=ISO] [GO:0055114 "oxidation-reduction process"
evidence=ISO] InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:109598 GO:GO:0016021
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 EMBL:AL606755 GeneTree:ENSGT00550000074557 CTD:15497
EMBL:AF031170 EMBL:AK142267 EMBL:CH466620 IPI:IPI00420666
RefSeq:NP_038849.2 UniGene:Mm.14435 ProteinModelPortal:O35469
SMR:O35469 STRING:O35469 PRIDE:O35469 Ensembl:ENSMUST00000029463
Ensembl:ENSMUST00000170847 GeneID:15497 KEGG:mmu:15497
InParanoid:Q3UQN7 OMA:FIHISST NextBio:288386 Bgee:O35469
Genevestigator:O35469 GermOnline:ENSMUSG00000027869 Uniprot:O35469
Length = 373
Score = 117 (46.2 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 57/197 (28%), Positives = 90/197 (45%)
Query: 79 GLTVLVTGAAGFVGSH-VSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVI 136
G + LVTGA GF+G V L ++++ + + LD F + ++ L V V+
Sbjct: 3 GWSCLVTGAGGFLGQRIVQLLMQEKDLEEIRVLDKF---FRPETREQFFNLDTNIKVTVL 59
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
+ DI D L K ++ V+H AA V + + ++ N+ G NLLE C +
Sbjct: 60 EGDILDTQYLRKACQGISV--VIHTAAVIDVTGVIPR-QTILDVNLKGTQNLLEACIQAS 116
Query: 197 PQPAIVWASSSSVYGVN--KKVPFS--EKDRTDQPAS-LYAATKKAGEAIAHAYN----H 247
PA +++SS V G N K++ + E++ + S Y +KK E A N
Sbjct: 117 V-PAFIFSSSVDVAGPNSYKEIILNGNEEEHHESIWSDPYPYSKKMAEKAVLAANGSMLK 175
Query: 248 IYG-LSITGLRFFTVYG 263
I G L LR +YG
Sbjct: 176 IGGTLHTCALRPMYIYG 192
Score = 50 (22.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
AQR+LGY P E +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q6P621 [details] [associations]
symbol:gmds "GDP-mannose 4,6-dehydratase" species:8364
"Xenopus (Silurana) tropicalis" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
OrthoDB:EOG4FXR7M EMBL:AAMC01033108 EMBL:AAMC01033109
EMBL:AAMC01033110 EMBL:AAMC01033111 EMBL:AAMC01033112
EMBL:AAMC01033113 EMBL:AAMC01033114 EMBL:AAMC01033115
EMBL:AAMC01033116 EMBL:AAMC01033117 EMBL:AAMC01033118
EMBL:AAMC01033119 EMBL:AAMC01033120 EMBL:AAMC01033121
EMBL:AAMC01033122 EMBL:AAMC01033123 EMBL:AAMC01033124
EMBL:AAMC01033125 EMBL:AAMC01033126 EMBL:AAMC01033127
EMBL:AAMC01033128 EMBL:AAMC01033129 EMBL:AAMC01033130
EMBL:AAMC01033131 EMBL:AAMC01033132 EMBL:BC062513 UniGene:Str.7169
ProteinModelPortal:Q6P621 STRING:Q6P621 Ensembl:ENSXETT00000001321
Xenbase:XB-GENE-943015 InParanoid:Q6P621 Bgee:Q6P621 Uniprot:Q6P621
Length = 383
Score = 120 (47.3 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 49/184 (26%), Positives = 86/184 (46%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFNNYYETSLKKARKGLLERAGVFVIDA 138
L+TG G GS+++ L ++G V G+ +FN L K +E + +
Sbjct: 38 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHAHIE-GNMKLHYG 96
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + L KI N V T + +L AQ+ V+ + + + G + LL+ K+
Sbjct: 97 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGLGTLRLLDATKTCGLI 156
Query: 199 PAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
++ + AS+S +YG +++P +K+ T P S Y A K I + Y L ++
Sbjct: 157 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 214
Query: 255 GLRF 258
G+ F
Sbjct: 215 GILF 218
Score = 47 (21.6 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 370 RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFV 404
R +V+F + S A+ +LG++P +K+ V
Sbjct: 336 RPTEVEFLQGDCSKAKNKLGWIPKVSFNELVKEMV 370
>UNIPROTKB|P72586 [details] [associations]
symbol:rfbD "GDP-D-mannose dehydratase" species:1111708
"Synechocystis sp. PCC 6803 substr. Kazusa" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:BA000022 GenomeReviews:BA000022_GR
GO:GO:0019673 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P32054 PIR:S74433
RefSeq:NP_439905.1 RefSeq:YP_005649960.1 ProteinModelPortal:P72586
SMR:P72586 IntAct:P72586 STRING:P72586 GeneID:12255298
GeneID:951882 KEGG:syn:sll1212 KEGG:syy:SYNGTS_0007 PATRIC:23836866
ProtClustDB:CLSK892430 Uniprot:P72586
Length = 362
Score = 125 (49.1 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 68/251 (27%), Positives = 103/251 (41%)
Query: 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGL----DNFNNYYETSLKKARKGLLERAG 132
++ VL+TG G GS++S L ++G V G+ FN L L A
Sbjct: 2 SKSKVVLLTGITGQDGSYLSELLLEKGYQVHGIIRRTSTFNTDRIDHLYVDPHDL--EAK 59
Query: 133 VFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETC 192
+ + D+ D + L +I V T + +L AQ+ VR + +P V+S G + LLE
Sbjct: 60 LRLHYGDLTDGTTLRRILEDVKPTEIYNLGAQSHVRVSFDSPEYTVDSVAMGTLRLLEAI 119
Query: 193 KSSDPQPAI----VWASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNH 247
+ + I A SS ++G +++P +K+ T P S YA K G Y
Sbjct: 120 RDYQHRTGIQVRFYQAGSSEMFGKVQEIP--QKETTPFYPRSPYACAKVYGHWQTVNYRE 177
Query: 248 IYGL-SITGLRFFTVYGPWGRPDMAYFFFTRDIIR---GKRITVYEAPDGASVARDFTYI 303
Y L + G+ F P TR I R G + +Y RD+ Y
Sbjct: 178 SYDLFACNGI-LFNHESPRRGETFVTRKITRAIARIVAGTQKKLYLG--NIDSKRDWGYA 234
Query: 304 DDIVKGCLAGL 314
D V+ A L
Sbjct: 235 KDYVRAMWAML 245
>TAIR|locus:2031255 [details] [associations]
symbol:AT1G25460 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0003824 EMBL:AC079281 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000167998
IPI:IPI00529040 PIR:G86384 RefSeq:NP_173917.1 UniGene:At.51766
ProteinModelPortal:Q9C6L6 SMR:Q9C6L6 EnsemblPlants:AT1G25460.1
GeneID:839132 KEGG:ath:AT1G25460 TAIR:At1g25460 InParanoid:Q9C6L6
OMA:HELGFAS PhylomeDB:Q9C6L6 ProtClustDB:CLSN2913588
Genevestigator:Q9C6L6 Uniprot:Q9C6L6
Length = 320
Score = 124 (48.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 66/247 (26%), Positives = 109/247 (44%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGV-LGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
LVTG F+ SHV +L + G V + + + + KG ER +F +AD+
Sbjct: 5 LVTGGTSFIASHVIKSLLEFGHYVRTTVRDSEDEEKVGFLWDLKGAKERLKIF--EADLT 62
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETC-KSSDPQPA 200
+ D+ N V V H+A++ VR N + + + NI+G +N++ +C KS +
Sbjct: 63 IEGSFDEAVNGV--DGVFHIASRVSVRLDNNNLDKF-DPNISGTMNVMNSCAKSRNTVKR 119
Query: 201 IVWASSSSV----YGVNKKVPFSEKDRTD----QPASLYAATKKA-GEAIAHAYNHIYGL 251
IV SSS+ + + P +E TD + ++ A KK GE A L
Sbjct: 120 IVLTSSSTAIRYRFDATQVSPLNESHWTDLEYCKHFKIWYAYKKTLGEKEAWRIAADKKL 179
Query: 252 S-ITGLRFFTVYGPW--GRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308
+ + + F + GP +P + F II+G R T G F +IDD+V
Sbjct: 180 NLVVVIPSFCI-GPILSPKPTSSPLIFL-SIIKGTRGTYPNFRGG------FVHIDDVVA 231
Query: 309 GCLAGLD 315
+ ++
Sbjct: 232 AQILAME 238
>FB|FBgn0036997 [details] [associations]
symbol:CG5955 species:7227 "Drosophila melanogaster"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GO:GO:0003978
GeneTree:ENSGT00390000014037 KO:K15789 OMA:DYAVEIF EMBL:AY058410
RefSeq:NP_649230.1 UniGene:Dm.4281 SMR:Q9VPE8 STRING:Q9VPE8
EnsemblMetazoa:FBtr0078197 GeneID:40268 KEGG:dme:Dmel_CG5955
UCSC:CG5955-RA FlyBase:FBgn0036997 InParanoid:Q9VPE8
OrthoDB:EOG4VT4CZ GenomeRNAi:40268 NextBio:817884 Uniprot:Q9VPE8
Length = 367
Score = 125 (49.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 62/242 (25%), Positives = 96/242 (39%)
Query: 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGV 133
PR +R +L+TG G +G + L+ + N + + K + +LE G
Sbjct: 40 PRESRPPKILITGGLGQLGIECAKLLRTQYGS-------QNVILSDIIKPSQSVLEN-GP 91
Query: 134 FVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK 193
++ ADI D L KI ++H +A QN V NI G N++E K
Sbjct: 92 YIF-ADILDFKGLQKIVVDHRIDWLIHFSALLSA-VGEQNVPLAVRVNIEGVHNVIELAK 149
Query: 194 SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSI 253
+ I S+ +G + + +P ++Y +K E I Y H +GL
Sbjct: 150 QYKLR--IFVPSTIGAFGPDSPRNPTPNVTIQRPRTIYGVSKVHAELIGEYYYHKFGLDF 207
Query: 254 TGLRFFTVYG---P-WGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKG 309
LRF V P G D A F + +R + T Y PD YI+D ++
Sbjct: 208 RCLRFPGVISSDPPGGGTTDYAVAVF-HEALRNGKYTCYLRPD---TRLPMMYIEDCLRA 263
Query: 310 CL 311
L
Sbjct: 264 LL 265
>UNIPROTKB|P14060 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006703 "estrogen biosynthetic process"
evidence=TAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] [GO:0030868 "smooth endoplasmic
reticulum membrane" evidence=ISS] [GO:0005758 "mitochondrial
intermembrane space" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0004769 "steroid delta-isomerase
activity" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic
process" evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic
process" evidence=TAS] [GO:0008202 "steroid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 EMBL:M27137
EMBL:M28392 EMBL:M28162 EMBL:M28391 EMBL:X53321 EMBL:M35493
EMBL:M63397 EMBL:M63395 EMBL:M63396 EMBL:M38180 EMBL:X55997
EMBL:S45679 EMBL:AK291556 EMBL:BC031999 IPI:IPI00843838 PIR:A36551
RefSeq:NP_000853.1 UniGene:Hs.364941 ProteinModelPortal:P14060
SMR:P14060 STRING:P14060 PhosphoSite:P14060 DMDM:112767
PRIDE:P14060 DNASU:3283 Ensembl:ENST00000369413
Ensembl:ENST00000528909 GeneID:3283 KEGG:hsa:3283 UCSC:uc001ehv.1
CTD:3283 GeneCards:GC01P120049 H-InvDB:HIX0028579 HGNC:HGNC:5217
MIM:109715 neXtProt:NX_P14060 PharmGKB:PA29486 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 InParanoid:P14060 KO:K00070
OrthoDB:EOG4K3KWG PhylomeDB:P14060 BioCyc:MetaCyc:HS08829-MONOMER
BRENDA:1.1.1.145 Reactome:REACT_15493 SABIO-RK:P14060
BindingDB:P14060 ChEMBL:CHEMBL1958 DrugBank:DB00157
DrugBank:DB01108 GenomeRNAi:3283 NextBio:13031 ArrayExpress:P14060
Bgee:P14060 CleanEx:HS_HSD3B1 Genevestigator:P14060
GermOnline:ENSG00000203857 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006703 GO:GO:0006704 GO:GO:0006705
GO:GO:0044281 Gene3D:3.40.50.720 Uniprot:P14060
Length = 373
Score = 117 (46.2 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 50/199 (25%), Positives = 86/199 (43%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
G + LVTGA GF+G + L K + + + + + L++ L + + V++
Sbjct: 3 GWSCLVTGAGGFLGQRIIRLLVKEKE-LKEIRVLDKAFGPELREEFSKLQNKTKLTVLEG 61
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D+ L + V+ ++H A V + + + S + N+ G LLE C +
Sbjct: 62 DILDEPFLKRACQDVSV--IIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 117
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPA-----SLYAATKKAGE-AI--AHAYNHIYG 250
P ++ SS V G N + ++P + Y +KK E A+ A+ +N G
Sbjct: 118 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNG 177
Query: 251 --LSITGLRFFTVYGPWGR 267
L LR +YG R
Sbjct: 178 GTLYTCALRPMYIYGEGSR 196
Score = 49 (22.3 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
AQR+L Y P E +K V W
Sbjct: 334 AQRDLAYKPLYSWEEAKQKTVEW 356
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 114 (45.2 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 64/302 (21%), Positives = 119/302 (39%)
Query: 124 RKGLLERAGVFVIDADINDKSLLDK--IFNVVAFTHV--MHLAAQ--AGVRYAMQNPNSY 177
R+ L +R V ++ ++ +LLD + + A + ++LAA G+ P +
Sbjct: 20 RRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASERIDQVYLAAAKVGGIVANNTYPADF 79
Query: 178 VESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR---TDQPASL-YAA 233
+ N+ N++ +D +++ SS +Y K P +E + T +P + YA
Sbjct: 80 IYQNMMIESNIIHAAHQNDVNK-LLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAI 138
Query: 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR--PDMAYFFFTRDIIRGKRITVYEAP 291
K AG + +YN YG + +YGP P ++ + R T AP
Sbjct: 139 AKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPAL-LRRFHEATAQNAP 197
Query: 292 D----GASVA-RDFTYIDDIVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPV 346
D G+ R+F ++DD+ + ++ A P I N+G +
Sbjct: 198 DVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVWLENTQ---PMLSHI-NVGTGVDCTI 253
Query: 347 SRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
L + K++ K V + +++ +LG+ LE GL +W
Sbjct: 254 RELAQTIAKVVGYKGRV-VFDASKPDGTPRKLLDVTRLH-QLGWYHEISLEAGLASTYQW 311
Query: 407 YL 408
+L
Sbjct: 312 FL 313
Score = 50 (22.7 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGD 104
V + G G VGS + L++RGD
Sbjct: 6 VFIAGHRGMVGSAIRRQLEQRGD 28
>UNIPROTKB|Q5TDG2 [details] [associations]
symbol:HSD3B1 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 1" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
UniGene:Hs.364941 HGNC:HGNC:5217 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
OMA:MAGWSCL GO:GO:0006694 GO:GO:0016853 EMBL:AL121995
IPI:IPI00246994 ProteinModelPortal:Q5TDG2 SMR:Q5TDG2 STRING:Q5TDG2
PRIDE:Q5TDG2 Ensembl:ENST00000235547 ArrayExpress:Q5TDG2
Bgee:Q5TDG2 Uniprot:Q5TDG2
Length = 375
Score = 117 (46.2 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 50/199 (25%), Positives = 86/199 (43%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
G + LVTGA GF+G + L K + + + + + L++ L + + V++
Sbjct: 5 GWSCLVTGAGGFLGQRIIRLLVKEKE-LKEIRVLDKAFGPELREEFSKLQNKTKLTVLEG 63
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D+ L + V+ ++H A V + + + S + N+ G LLE C +
Sbjct: 64 DILDEPFLKRACQDVSV--IIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 119
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPA-----SLYAATKKAGE-AI--AHAYNHIYG 250
P ++ SS V G N + ++P + Y +KK E A+ A+ +N G
Sbjct: 120 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPAPYPHSKKLAEKAVLAANGWNLKNG 179
Query: 251 --LSITGLRFFTVYGPWGR 267
L LR +YG R
Sbjct: 180 GTLYTCALRPMYIYGEGSR 198
Score = 49 (22.3 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
AQR+L Y P E +K V W
Sbjct: 336 AQRDLAYKPLYSWEEAKQKTVEW 358
>UNIPROTKB|P71790 [details] [associations]
symbol:gmdA "GDP-D-mannose dehydratase gmdA (GDP-mannose
4,6 dehydratase) (GMD)" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA] [GO:0071456
"cellular response to hypoxia" evidence=IEP] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005886
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842576 GO:GO:0071456 GO:GO:0005622
GO:GO:0019673 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:DAIRDWG HSSP:P32054 EMBL:CP003248
PIR:B70714 RefSeq:NP_216027.1 RefSeq:YP_006514898.1
ProteinModelPortal:P71790 SMR:P71790 PRIDE:P71790
EnsemblBacteria:EBMYCT00000003919 GeneID:13320108 GeneID:886529
KEGG:mtu:Rv1511 KEGG:mtv:RVBD_1511 PATRIC:18151910
TubercuList:Rv1511 ProtClustDB:CLSK791213 Uniprot:P71790
Length = 340
Score = 124 (48.7 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 63/239 (26%), Positives = 97/239 (40%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAG--VFVIDADI 140
L+TG G GS+++ L +G V GL + + TS + G +F+ D+
Sbjct: 5 LITGITGQDGSYLAELLLAKGYEVHGLIRRASTFNTSRIDHLYVDPHQPGARLFLHYGDL 64
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
D + L + + + V +LAAQ+ VR + P ++ G + LLE + S
Sbjct: 65 IDGTRLVTLLSTIEPDEVYNLAAQSHVRVSFDEPVHTGDTTGMGSMRLLEAVRLSRVHCR 124
Query: 201 IVWASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SITGLRF 258
ASSS ++G + P + + T P S Y A K Y YGL ++ G+
Sbjct: 125 FYQASSSEMFGAS---PPPQNELTPFYPRSPYGAAKVYSYWATRNYREAYGLFAVNGI-L 180
Query: 259 FTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDG-ASVARDFTYIDDIVKGCLAGLDT 316
F P TR + R K E G RD+ Y + V+G L T
Sbjct: 181 FNHESPRRGETFVTRKITRAVARIKAGIQSEVYMGNLDAVRDWGYAPEYVEGMWRMLQT 239
>UNIPROTKB|Q8AVI1 [details] [associations]
symbol:gmds "Gmds-prov protein" species:8355 "Xenopus
laevis" [GO:0005575 "cellular_component" evidence=ND] [GO:0007219
"Notch signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401 "NADP+
binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOVERGEN:HBG000727 CTD:2762
HSSP:P32054 EMBL:BC042270 EMBL:BC111472 RefSeq:NP_001080352.1
UniGene:Xl.10260 SMR:Q8AVI1 GeneID:380044 KEGG:xla:380044
Xenbase:XB-GENE-943021 Uniprot:Q8AVI1
Length = 369
Score = 117 (46.2 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 50/195 (25%), Positives = 89/195 (45%)
Query: 71 STRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGL-L 128
S +PR L+TG G GS+++ L ++G V G+ ++ + T ++ K
Sbjct: 16 SGKPRKV----ALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPHA 71
Query: 129 ERAGVFVID-ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVN 187
G + D+ D + L KI N V T + +L AQ+ V+ + + + G +
Sbjct: 72 HTEGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGLGTLR 131
Query: 188 LLETCKSSDPQPAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHA 244
LL+ K+ + + AS+S +YG +++P +K+ T P S Y A K I
Sbjct: 132 LLDATKTCGLINTVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVN 189
Query: 245 YNHIYGL-SITGLRF 258
+ Y L ++ G+ F
Sbjct: 190 FREAYNLFAVNGILF 204
Score = 48 (22.0 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 360 KAETKV-LPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFV 404
K KV L R +V F + S A+ +LG+ P + +K+ V
Sbjct: 311 KIHVKVDLKYYRPTEVDFLQGDCSQAKNKLGWTPKVSFDELVKEMV 356
>POMBASE|SPAC513.07 [details] [associations]
symbol:SPAC513.07 "flavonol reductase/cinnamoyl-CoA
reductase family" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEP] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 PomBase:SPAC513.07 GO:GO:0005829 GO:GO:0005634
EMBL:CU329670 GO:GO:0033554 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016491 GO:GO:0044237
OrthoDB:EOG480N5D HOGENOM:HOG000167998 HSSP:Q9UUN9 PIR:T38902
RefSeq:NP_593981.1 ProteinModelPortal:Q9UT59 PRIDE:Q9UT59
EnsemblFungi:SPAC513.07.1 GeneID:2543471 KEGG:spo:SPAC513.07
OMA:YDICTIN NextBio:20804483 Uniprot:Q9UT59
Length = 336
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 51/183 (27%), Positives = 77/183 (42%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
G VLVTG GF+G+HV+ L + G V G + L + GL ++ FVI
Sbjct: 3 GKLVLVTGVTGFIGAHVAEQLLQAGYRVRGTVRSMEKAD-ELIRLNPGLKDKIE-FVIVK 60
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D++ + D + V + H+A+ V N + ++ + G + +LE +
Sbjct: 61 DVSASNAFDGVLKDVEL--ICHIASPFFVENVTDNKSQLLDPAVKGTLGILEAAQGVKSI 118
Query: 199 PAIVWASSSSVYGV------NKKVPFSEKD----------RTDQPASLYAATKKAGEAIA 242
IV SS + G N KV ++EKD TD Y A+KK E A
Sbjct: 119 KRIVITSSFAAVGNFQIDPHNNKV-YTEKDWNPITYEEALTTDNGIVAYCASKKLAEEAA 177
Query: 243 HAY 245
Y
Sbjct: 178 REY 180
>UNIPROTKB|F6Z8R0 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:13616
"Monodelphis domestica" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
Ensembl:ENSMODT00000010461 Uniprot:F6Z8R0
Length = 347
Score = 123 (48.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 49/184 (26%), Positives = 87/184 (47%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFNNYYETSLKKARKGLLERAGVFVIDA 138
L+TG G GS+++ L ++G V G+ +FN L K + +E + +
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + L KI N V T + +L AQ+ V+ + + + G + LL+ K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 199 PAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
++ + AS+S +YG +++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 255 GLRF 258
G+ F
Sbjct: 204 GILF 207
>MGI|MGI:2141879 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3
beta- and steroid delta-isomerase 7" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol
3-beta-dehydrogenase activity" evidence=ISO] [GO:0055114
"oxidation-reduction process" evidence=ISO] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 MGI:MGI:2141879
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0006694 GeneTree:ENSGT00550000074557 CTD:80270
KO:K12408 OMA:PCGLRLV OrthoDB:EOG4N5VX7 GO:GO:0047016 GO:GO:0001558
EMBL:AF277718 EMBL:BC132605 EMBL:BC138589 IPI:IPI00111009
RefSeq:NP_598704.2 UniGene:Mm.486340 ProteinModelPortal:Q9EQC1
SMR:Q9EQC1 STRING:Q9EQC1 PhosphoSite:Q9EQC1 PaxDb:Q9EQC1
PRIDE:Q9EQC1 Ensembl:ENSMUST00000046863 GeneID:101502
KEGG:mmu:101502 UCSC:uc009jwu.1 InParanoid:A2RTR5 ChiTaRS:HSD3B7
NextBio:354976 Bgee:Q9EQC1 Genevestigator:Q9EQC1
GermOnline:ENSMUSG00000042289 Uniprot:Q9EQC1
Length = 369
Score = 116 (45.9 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 60/239 (25%), Positives = 104/239 (43%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
L LVTG GF+G H+ L +R + L F+ + + L++ + G ++ V I D
Sbjct: 10 LVYLVTGGCGFLGEHIVRMLLEREPRLRELRVFDLHLSSWLEELKAGPVQ---VTAIQGD 66
Query: 140 INDKSLLDKIFNVVAFTHVM-HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+ ++ ++ +HV+ H A V + +P + + N+ G N+++ C + Q
Sbjct: 67 VTQAH---EVAAAMSGSHVVIHTAGLVDV-FGKASPKTIHKVNVQGTQNVIDACVQTGTQ 122
Query: 199 PAIVWASSSSVYGVN-KKVPFSEKDRTDQPASL-----YAATKKAGEAIAHAYN--HIYG 250
+V+ SS V G N K PF + D P Y +K E + N + G
Sbjct: 123 -YLVYTSSMEVVGPNIKGHPFY-RGNEDTPYEAVHSHPYPCSKALAEQLVLEANGRKVNG 180
Query: 251 ---LSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306
L LR +YG G M F++ + + G R+ + A ASV Y+ ++
Sbjct: 181 GLPLVTCALRPTGIYGE-GHQVMRDFYY-QGLRFGGRL--FRAVP-ASVEHGRVYVGNV 234
Score = 48 (22.0 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
FT + + AQR GY P E + ++W + SA
Sbjct: 331 FT-VSTNKAQRHFGYKPLFSWEESRTRTIQWVQAMEGSA 368
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 118 (46.6 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 47/188 (25%), Positives = 86/188 (45%)
Query: 83 LVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
++ G GF+G+HV AL+K G + ++ +D ++T +K ++++ + I A
Sbjct: 5 VIVGGGGFLGAHVISALQKIGCKERIIVVDPCPQEFKT-IK------IDKSNISYIKASF 57
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
D +L+ I N + V+HLAA + S N+ G L++ CK+ +
Sbjct: 58 LDDKVLENILN--GASAVVHLAAVGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALGVK-R 114
Query: 201 IVWASSSSVYGVNKKVP-FSEKDRTDQPAS---LYAATKKAGEAIAHAYNHIYGLSITGL 256
++ASS +V + + + +E D P Y+A+K E + + L
Sbjct: 115 FLYASSVAVSFIGEPLDNVTEDDPLPDPKKYLDFYSASKAEAETYVLSQS-TPDFKTVCL 173
Query: 257 RFFTVYGP 264
RF +YGP
Sbjct: 174 RFRGIYGP 181
Score = 46 (21.3 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 380 NISLAQRELGYMPTTDLETGLKKF 403
+I A+RELGY P + T + K+
Sbjct: 313 SIERARRELGYEPEPCVMTDVAKY 336
>UNIPROTKB|I3LIF3 [details] [associations]
symbol:HSD3B7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:PCGLRLV EMBL:CU914342
Ensembl:ENSSSCT00000029053 Uniprot:I3LIF3
Length = 363
Score = 123 (48.4 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 60/232 (25%), Positives = 96/232 (41%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
L LVTG GF+G HV L ++ + L F+ + L++ G ++ V I D
Sbjct: 10 LVYLVTGGCGFLGEHVVRMLLQQEPRLCELRVFDLHLGPWLEELETGPVQ---VTAIQGD 66
Query: 140 INDKSLLDKIFNVVAFTHVM-HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+ ++ VA HV+ H A V + +P + E N+ G N++E C + +
Sbjct: 67 VTQAH---EVAAAVAGAHVVIHTAGLVDV-FGRASPETIHEVNVQGTQNVIEACVQNGTR 122
Query: 199 PAIVWASSSSVYGV----NKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSIT 254
+V+ SS V G N+ P+ R P S A + EA L
Sbjct: 123 -FLVYTSSMEVVGPTTRGNENTPYEAAHRHPYPRSKALAERLVLEANGRKVRGGLPLVTC 181
Query: 255 GLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306
LR +YG G M F+ + + G R+ + P ASV Y+ ++
Sbjct: 182 ALRPTGIYGE-GHQIMKDFYH-QGLRLGGRL-LRAIP--ASVEHGRVYVGNV 228
Score = 40 (19.1 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
A R GY P E + +RW
Sbjct: 332 ALRHFGYEPLFSWEESRARTIRW 354
>UNIPROTKB|O60547 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:9606
"Homo sapiens" [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IC]
[GO:0070401 "NADP+ binding" evidence=IDA] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=IGI;IDA] [GO:0019673
"GDP-mannose metabolic process" evidence=IGI;IDA] [GO:0007219
"Notch signaling pathway" evidence=ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 GO:GO:0005737 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 EMBL:AL034344
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 OMA:IAYNLTD HOVERGEN:HBG000727 EMBL:AF042377
EMBL:CR541929 EMBL:CR541947 EMBL:AL033517 EMBL:AL035693
EMBL:AL137179 EMBL:AL158139 EMBL:BC000117 EMBL:AF040260
IPI:IPI00030207 RefSeq:NP_001240775.1 RefSeq:NP_001491.1
UniGene:Hs.144496 UniGene:Hs.660919 PDB:1T2A PDBsum:1T2A
ProteinModelPortal:O60547 SMR:O60547 IntAct:O60547 STRING:O60547
PhosphoSite:O60547 PaxDb:O60547 PeptideAtlas:O60547 PRIDE:O60547
DNASU:2762 Ensembl:ENST00000380815 GeneID:2762 KEGG:hsa:2762
UCSC:uc003mtq.3 CTD:2762 GeneCards:GC06M001624 HGNC:HGNC:4369
HPA:HPA031528 MIM:602884 neXtProt:NX_O60547 PharmGKB:PA28754
InParanoid:O60547 OrthoDB:EOG4FXR7M PhylomeDB:O60547 ChiTaRS:GMDS
EvolutionaryTrace:O60547 GenomeRNAi:2762 NextBio:10866
ArrayExpress:O60547 Bgee:O60547 CleanEx:HS_GMDS
Genevestigator:O60547 GermOnline:ENSG00000112699 Uniprot:O60547
Length = 372
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 49/184 (26%), Positives = 87/184 (47%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFNNYYETSLKKARKGLLERAGVFVIDA 138
L+TG G GS+++ L ++G V G+ +FN L K + +E + +
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + L KI N V T + +L AQ+ V+ + + + G + LL+ K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 145
Query: 199 PAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
++ + AS+S +YG +++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 255 GLRF 258
G+ F
Sbjct: 204 GILF 207
>UNIPROTKB|F6W0W9 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase isoform 1"
species:9544 "Macaca mulatta" [GO:0005575 "cellular_component"
evidence=ND] [GO:0007219 "Notch signaling pathway" evidence=ISS]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=ISS]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISS]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0070401 "NADP+ binding" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
CTD:2762 EMBL:JU322217 EMBL:JV046790 RefSeq:NP_001253718.1
UniGene:Mmu.34300 Ensembl:ENSMMUT00000008111 GeneID:707051
KEGG:mcc:707051 NextBio:19971634 Uniprot:F6W0W9
Length = 372
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 49/184 (26%), Positives = 87/184 (47%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFNNYYETSLKKARKGLLERAGVFVIDA 138
L+TG G GS+++ L ++G V G+ +FN L K + +E + +
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + L KI N V T + +L AQ+ V+ + + + G + LL+ K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 145
Query: 199 PAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
++ + AS+S +YG +++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 255 GLRF 258
G+ F
Sbjct: 204 GILF 207
>UNIPROTKB|F7EWI9 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9483
"Callithrix jacchus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
GO:GO:0008446 TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640
OMA:IAYNLTD CTD:2762 EMBL:ACFV01112271 EMBL:ACFV01112272
EMBL:ACFV01112273 EMBL:ACFV01112274 EMBL:ACFV01112275
EMBL:ACFV01112276 EMBL:ACFV01112277 EMBL:ACFV01112278
EMBL:ACFV01112279 EMBL:ACFV01112280 EMBL:ACFV01112281
EMBL:ACFV01112282 EMBL:ACFV01112283 EMBL:ACFV01112284
EMBL:ACFV01112285 EMBL:ACFV01112286 EMBL:ACFV01112287
EMBL:ACFV01112288 EMBL:ACFV01112289 EMBL:ACFV01112290
EMBL:ACFV01112291 EMBL:ACFV01112292 EMBL:ACFV01112293
EMBL:ACFV01112294 EMBL:ACFV01112295 EMBL:ACFV01112296
EMBL:ACFV01112297 EMBL:ACFV01112298 EMBL:ACFV01112299
EMBL:ACFV01112300 EMBL:ACFV01112301 RefSeq:XP_002746325.1
ProteinModelPortal:F7EWI9 Ensembl:ENSCJAT00000038466
GeneID:100390839 Uniprot:F7EWI9
Length = 372
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 49/184 (26%), Positives = 87/184 (47%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFNNYYETSLKKARKGLLERAGVFVIDA 138
L+TG G GS+++ L ++G V G+ +FN L K + +E + +
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + L KI N V T + +L AQ+ V+ + + + G + LL+ K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLI 145
Query: 199 PAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
++ + AS+S +YG +++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 255 GLRF 258
G+ F
Sbjct: 204 GILF 207
>UNIPROTKB|Q8K3X3 [details] [associations]
symbol:GMDS "GDP-mannose 4,6 dehydratase" species:10029
"Cricetulus griseus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0007219 "Notch signaling pathway" evidence=ISS] [GO:0008446
"GDP-mannose 4,6-dehydratase activity" evidence=ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISS] [GO:0070401
"NADP+ binding" evidence=ISS] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
GO:GO:0019673 GO:GO:0042351 GO:GO:0008446 TIGRFAMs:TIGR01472
EMBL:AF525364 RefSeq:NP_001233625.1 ProteinModelPortal:Q8K3X3
SMR:Q8K3X3 GeneID:100689436 CTD:33716 HOVERGEN:HBG000727
Uniprot:Q8K3X3
Length = 372
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 49/184 (26%), Positives = 87/184 (47%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFNNYYETSLKKARKGLLERAGVFVIDA 138
L+TG G GS+++ L ++G V G+ +FN L K + +E + +
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + L KI N V T + +L AQ+ V+ + + + G + LL+ K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 199 PAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
++ + AS+S +YG +++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 255 GLRF 258
G+ F
Sbjct: 204 GILF 207
>MGI|MGI:1891112 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=ISO] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0070401 "NADP+ binding" evidence=ISO] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 MGI:MGI:1891112 Gene3D:3.40.50.720 GO:GO:0007219
GO:GO:0005622 GO:GO:0070401 GO:GO:0019673 GO:GO:0042351
eggNOG:COG1089 KO:K01711 GO:GO:0008446 TIGRFAMs:TIGR01472
HOGENOM:HOG000168003 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
HOVERGEN:HBG000727 CTD:2762 OrthoDB:EOG4FXR7M EMBL:AL645643
EMBL:AL645664 EMBL:AL645697 EMBL:AL645783 EMBL:AL645763
EMBL:BC031788 EMBL:BC093502 IPI:IPI00169546 RefSeq:NP_666153.1
UniGene:Mm.247143 ProteinModelPortal:Q8K0C9 SMR:Q8K0C9
STRING:Q8K0C9 PhosphoSite:Q8K0C9 PaxDb:Q8K0C9 PRIDE:Q8K0C9
Ensembl:ENSMUST00000041859 GeneID:218138 KEGG:mmu:218138
UCSC:uc007pzq.1 InParanoid:Q8K0C9 NextBio:376160 Bgee:Q8K0C9
CleanEx:MM_GMDS Genevestigator:Q8K0C9 GermOnline:ENSMUSG00000038372
Uniprot:Q8K0C9
Length = 372
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 49/184 (26%), Positives = 87/184 (47%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFNNYYETSLKKARKGLLERAGVFVIDA 138
L+TG G GS+++ L ++G V G+ +FN L K + +E + +
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + L KI N V T + +L AQ+ V+ + + + G + LL+ K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 199 PAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
++ + AS+S +YG +++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 255 GLRF 258
G+ F
Sbjct: 204 GILF 207
>RGD|1311008 [details] [associations]
symbol:Gmds "GDP-mannose 4, 6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0005575 "cellular_component" evidence=ND]
[GO:0005622 "intracellular" evidence=IEA] [GO:0007219 "Notch
signaling pathway" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISO;ISS] [GO:0019673
"GDP-mannose metabolic process" evidence=ISO;ISS] [GO:0042351 "'de
novo' GDP-L-fucose biosynthetic process" evidence=ISO;ISS]
[GO:0070401 "NADP+ binding" evidence=ISO;ISS] InterPro:IPR001509
InterPro:IPR006368 Pfam:PF01370 InterPro:IPR016040 RGD:1311008
Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622 GO:GO:0070401
EMBL:CH473977 GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711
GO:GO:0008446 TIGRFAMs:TIGR01472 HOGENOM:HOG000168003
GeneTree:ENSGT00440000033640 OMA:IAYNLTD HOVERGEN:HBG000727
CTD:2762 OrthoDB:EOG4FXR7M EMBL:BC104708 IPI:IPI00362967
RefSeq:NP_001034695.1 UniGene:Rn.212995 SMR:Q3MHS7 STRING:Q3MHS7
Ensembl:ENSRNOT00000023691 GeneID:291095 KEGG:rno:291095
UCSC:RGD:1311008 InParanoid:Q3MHS7 NextBio:632111
Genevestigator:Q3MHS7 Uniprot:Q3MHS7
Length = 372
Score = 123 (48.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 49/184 (26%), Positives = 87/184 (47%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFNNYYETSLKKARKGLLERAGVFVIDA 138
L+TG G GS+++ L ++G V G+ +FN L K + +E + +
Sbjct: 27 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIE-GNMKLHYG 85
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + L KI N V T + +L AQ+ V+ + + + G + LL+ K+
Sbjct: 86 DLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 145
Query: 199 PAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
++ + AS+S +YG +++P +K+ T P S Y A K I + Y L ++
Sbjct: 146 NSVKFYQASTSELYGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 203
Query: 255 GLRF 258
G+ F
Sbjct: 204 GILF 207
>TIGR_CMR|CPS_2156 [details] [associations]
symbol:CPS_2156 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:167879 "Colwellia
psychrerythraea 34H" [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=ISS] [GO:0006694 "steroid
biosynthetic process" evidence=ISS] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 HOGENOM:HOG000167989
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0016853 EMBL:CP000083 GenomeReviews:CP000083_GR OMA:KAYFLSN
RefSeq:YP_268881.1 ProteinModelPortal:Q482Y6 STRING:Q482Y6
GeneID:3521240 KEGG:cps:CPS_2156 PATRIC:21467431
ProtClustDB:CLSK906403 BioCyc:CPSY167879:GI48-2226-MONOMER
Uniprot:Q482Y6
Length = 400
Score = 103 (41.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 40/161 (24%), Positives = 71/161 (44%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
V VTGA GF+G+ + L+ V G +Y E L + GV ++ DI
Sbjct: 47 VFVTGAGGFLGTAICRLLRLANIKVTGFAR-GHYPE----------LSQMGVNMVQGDIT 95
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D +LL + + V H+AA+AGV + + Y + N+ G N+++ C+ +
Sbjct: 96 DFALLKETMHSCDL--VFHVAAKAGV---WGSKDDYFKPNVQGAKNIIQACQELAITRLV 150
Query: 202 VWASSSSVY-GVNKKVPFSEKDRTDQPASLYAATKKAGEAI 241
++ S + GV++ + D + Y +K E +
Sbjct: 151 YTSTPSVTFAGVDEAGIDESQPYADNFLNFYGESKALAEQL 191
Score = 63 (27.2 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 355 KILKVKAETKVLPLPRNGDVQFTHA-NISLAQRELGYMPTTDLETGLKK 402
KIL +K E + + +H +IS A+++LGY P +E G+K+
Sbjct: 344 KILNIKKEPVMTRFVAR-QLSTSHYFDISAAKKDLGYTPLISIEEGMKQ 391
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 101 (40.6 bits), Expect = 0.00012, P = 0.00012
Identities = 37/139 (26%), Positives = 62/139 (44%)
Query: 171 MQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEK--DRTDQ-- 226
M NP +++N G +N+L K + ++ AS+S VYG + P SE +
Sbjct: 1 MYNPIKTLKTNTIGTLNMLGLAKRVGAR--LLLASTSEVYGDPEVHPQSEDYWGHVNPIG 58
Query: 227 PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFF--FTRDIIRGKR 284
P + Y K+ E + +AY G+ + R F +GP + F ++G+
Sbjct: 59 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEP 118
Query: 285 ITVYEAPDGASVARDFTYI 303
+TVY + S R F Y+
Sbjct: 119 LTVYGS---GSQTRAFQYV 134
>RGD|67377 [details] [associations]
symbol:Hsd3b1 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 1" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity" evidence=IDA]
[GO:0004769 "steroid delta-isomerase activity" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=ISO] [GO:0005758
"mitochondrial intermembrane space" evidence=ISO] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006700
"C21-steroid hormone biosynthetic process" evidence=IDA] [GO:0006702
"androgen biosynthetic process" evidence=IDA] [GO:0010288 "response
to lead ion" evidence=IEP] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=TAS]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030283
"testosterone dehydrogenase [NAD(P)] activity" evidence=TAS]
[GO:0031966 "mitochondrial membrane" evidence=IEA] [GO:0033327
"Leydig cell differentiation" evidence=IEP] [GO:0034698 "response to
gonadotropin stimulus" evidence=IEP] [GO:0034757 "negative
regulation of iron ion transport" evidence=IMP] [GO:0046686
"response to cadmium ion" evidence=IEP] [GO:0051412 "response to
corticosterone stimulus" evidence=IEP] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:67377
GO:GO:0016021 GO:GO:0046686 GO:GO:0021766 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 GO:GO:0006702
Gene3D:3.40.50.720 OMA:MAGWSCL GO:GO:0005789 GO:GO:0031966
GO:GO:0033327 GO:GO:0051412 GO:GO:0010288
GeneTree:ENSGT00550000074557 EMBL:L17138 EMBL:BC089937
IPI:IPI00555268 PIR:A48769 RefSeq:NP_058961.4 RefSeq:XP_003749409.1
UniGene:Rn.109394 ProteinModelPortal:Q62878 STRING:Q62878
Ensembl:ENSRNOT00000026306 GeneID:100911154 GeneID:29632
KEGG:rno:100911154 KEGG:rno:29632 UCSC:RGD:67377 CTD:15497
InParanoid:Q62878 NextBio:609864 Genevestigator:Q62878
GermOnline:ENSRNOG00000019441 GO:GO:0030283 GO:GO:0006700
GO:GO:0034757 GO:GO:0034698 Uniprot:Q62878
Length = 373
Score = 112 (44.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 47/174 (27%), Positives = 78/174 (44%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
G + LVTGA GF+G + L + D + + + + ++ L V V++
Sbjct: 3 GWSCLVTGAGGFLGQRIVQLLVQEKD-LKEVRVLDKVFRPETREEFFNLGTSIKVTVLEG 61
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYV-ESNIAGFVNLLETCKSSDP 197
DI D L + ++ V+H AA V NP + + N+ G NLLE C +
Sbjct: 62 DILDTQCLRRACQGISV--VIHTAALIDVTGV--NPRQTILDVNLKGTQNLLEACVQASV 117
Query: 198 QPAIVWASSSSVYGVN--KKVPFS--EKDRTDQP-ASLYAATKKAGEAIAHAYN 246
PA ++ S+ V G N KK+ + E++ + ++ Y +KK E A N
Sbjct: 118 -PAFIYCSTVDVAGPNSYKKIILNGHEEEHHESTWSNPYPYSKKMAEKAVLAAN 170
Score = 51 (23.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
AQR+LGY P E +K W
Sbjct: 334 AQRDLGYKPLVSWEEAKQKTSEW 356
>TAIR|locus:2056171 [details] [associations]
symbol:AT2G02400 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0009809 "lignin biosynthetic
process" evidence=ISS] [GO:0016621 "cinnamoyl-CoA reductase
activity" evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC005312 HOGENOM:HOG000167998 EMBL:BT005781
EMBL:BT006079 EMBL:AK228447 IPI:IPI00542037 PIR:C84436
RefSeq:NP_178345.1 UniGene:At.41493 UniGene:At.69541
ProteinModelPortal:Q9ZVQ2 SMR:Q9ZVQ2 STRING:Q9ZVQ2 PaxDb:Q9ZVQ2
PRIDE:Q9ZVQ2 DNASU:814771 EnsemblPlants:AT2G02400.1 GeneID:814771
KEGG:ath:AT2G02400 TAIR:At2g02400 InParanoid:Q9ZVQ2 OMA:NGFIGSW
PhylomeDB:Q9ZVQ2 ProtClustDB:CLSN2683687 ArrayExpress:Q9ZVQ2
Genevestigator:Q9ZVQ2 Uniprot:Q9ZVQ2
Length = 318
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 49/198 (24%), Positives = 87/198 (43%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140
TV VTGA GF+GS + L ++G + + T L + G + +F +AD+
Sbjct: 5 TVCVTGANGFIGSWIIRTLIEKGYTKIHASIYPGSDPTHLLQL-PGSDSKIKIF--EADL 61
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
D + + + A V H+A+ + + VE + G +N+LE K + +
Sbjct: 62 LDSDAISRAIDGCA--GVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAAKRFNVRRV 119
Query: 201 IVWASSSS-VYGVN--KKVPFSEKDRTD-----QPASLYAATKKAGEAIAHAYNHIYGLS 252
++ +S S+ V N +KVP E +D Y +K E A ++ +G +
Sbjct: 120 VITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKWYPISKTLAEKAAWEFSEKHGTN 179
Query: 253 ITGLRFFTVYGPWGRPDM 270
I + T GP +P++
Sbjct: 180 IVTIHPSTCLGPLLQPNL 197
>TAIR|locus:2080933 [details] [associations]
symbol:MUR1 "MURUS 1" species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS;IDA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009826 "unidimensional cell growth" evidence=IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006007 "glucose catabolic process"
evidence=RCA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IMP] InterPro:IPR001509 InterPro:IPR006368
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005525
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009826 EMBL:AL132980
GO:GO:0019673 GO:GO:0042351 eggNOG:COG1089 KO:K01711 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 ProtClustDB:PLN02653
EMBL:U81805 EMBL:BT025710 EMBL:AY084574 IPI:IPI00519785 PIR:T45747
RefSeq:NP_190685.2 UniGene:At.23910 PDB:1N7G PDB:1N7H PDBsum:1N7G
PDBsum:1N7H ProteinModelPortal:P93031 SMR:P93031 STRING:P93031
PaxDb:P93031 PRIDE:P93031 EnsemblPlants:AT3G51160.1 GeneID:824280
KEGG:ath:AT3G51160 GeneFarm:4170 TAIR:At3g51160 InParanoid:P93031
OMA:DAIRDWG PhylomeDB:P93031 BioCyc:MetaCyc:AT3G51160-MONOMER
EvolutionaryTrace:P93031 Genevestigator:P93031 GermOnline:AT3G51160
Uniprot:P93031
Length = 373
Score = 121 (47.7 bits), Expect = 0.00016, P = 0.00016
Identities = 55/190 (28%), Positives = 85/190 (44%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFN----NYYETSLKKARKGLLERAGVF 134
L+TG G GS+++ L +G V GL NFN N+ K L++
Sbjct: 32 LITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMK----- 86
Query: 135 VIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS 194
+ AD+ D S L + +V+ V +LAAQ+ V + + P+ + G + LLE +S
Sbjct: 87 LHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 146
Query: 195 S--DPQPAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIY 249
D + + A SS ++G P + + T P S YAA+K A Y Y
Sbjct: 147 HTIDSGRTVKYYQAGSSEMFG---STPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 203
Query: 250 GL-SITGLRF 258
GL + G+ F
Sbjct: 204 GLFACNGILF 213
>UNIPROTKB|P26439 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IDA] [GO:0006694 "steroid
biosynthetic process" evidence=IDA] [GO:0004769 "steroid
delta-isomerase activity" evidence=IDA] [GO:0030868 "smooth
endoplasmic reticulum membrane" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0005758
"mitochondrial intermembrane space" evidence=ISS] [GO:0031966
"mitochondrial membrane" evidence=NAS] [GO:0005783 "endoplasmic
reticulum" evidence=NAS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006702 "androgen biosynthetic process"
evidence=TAS] [GO:0006704 "glucocorticoid biosynthetic process"
evidence=TAS] [GO:0006705 "mineralocorticoid biosynthetic process"
evidence=TAS] [GO:0008202 "steroid metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021 eggNOG:COG0451
HOVERGEN:HBG000014 KO:K00070 BRENDA:1.1.1.145 Reactome:REACT_15493
DrugBank:DB00157 DrugBank:DB01108 GO:GO:0005743 GO:GO:0005758
GO:GO:0030868 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
GO:GO:0006702 GO:GO:0006704 GO:GO:0006705 GO:GO:0044281
Gene3D:3.40.50.720 OMA:WVFPRIA EMBL:M77144 EMBL:M67466
EMBL:CR627415 EMBL:AK222997 EMBL:AL359553 EMBL:CH471122
EMBL:BC038419 EMBL:BC131488 EMBL:S80140 EMBL:S60309 EMBL:S60310
IPI:IPI00218494 IPI:IPI00465001 PIR:A39488 RefSeq:NP_000189.1
RefSeq:NP_001159592.1 UniGene:Hs.654399 ProteinModelPortal:P26439
SMR:P26439 STRING:P26439 PhosphoSite:P26439 DMDM:112770
PRIDE:P26439 DNASU:3284 Ensembl:ENST00000369416
Ensembl:ENST00000543831 GeneID:3284 KEGG:hsa:3284 UCSC:uc001ehs.3
UCSC:uc001ehu.3 CTD:3284 GeneCards:GC01P119957 HGNC:HGNC:5218
MIM:201810 MIM:613890 neXtProt:NX_P26439 Orphanet:90791
Orphanet:1331 Orphanet:3185 PharmGKB:PA29487 InParanoid:P26439
PhylomeDB:P26439 BioCyc:MetaCyc:HS10943-MONOMER BindingDB:P26439
ChEMBL:CHEMBL3670 GenomeRNAi:3284 NextBio:13035 ArrayExpress:P26439
Bgee:P26439 CleanEx:HS_HSD3B2 Genevestigator:P26439
GermOnline:ENSG00000203859 Uniprot:P26439
Length = 372
Score = 113 (44.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 50/198 (25%), Positives = 85/198 (42%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
G + LVTGA G +G + L + + + + + + L++ L R + V++
Sbjct: 2 GWSCLVTGAGGLLGQRIVRLLVEEKE-LKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 60
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D+ L + V+ V+H A V + + + S + N+ G LLE C +
Sbjct: 61 DILDEPFLKRACQDVSV--VIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 116
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPA-----SLYAATKKAGE-AI--AHAYNHIYG 250
P ++ SS V G N + ++P + Y +KK E A+ A+ +N G
Sbjct: 117 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNG 176
Query: 251 --LSITGLRFFTVYGPWG 266
L LR +YG G
Sbjct: 177 DTLYTCALRPTYIYGEGG 194
Score = 49 (22.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
AQR+L Y P E +K V W
Sbjct: 333 AQRDLAYKPLYSWEEAKQKTVEW 355
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 97 (39.2 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 55/242 (22%), Positives = 98/242 (40%)
Query: 129 ERAGVFVIDADINDKSLLDKIFNV-VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVN 187
+R F+ D N ++LL + +V VAF H A+ A + N + + N G
Sbjct: 48 DRVQFFLGDL-CNKEALLPALQDVSVAF----HCASPAP---SSDNKELFYKVNFMGTKA 99
Query: 188 LLETCKSSDPQPAIVWASSSSVY-GVNKKVPFSEKDRTDQPASLYAATKKAGEA-IAHAY 245
++E CK + Q ++ +S+S V+ G + K + +P Y TK E + A
Sbjct: 100 VIEACKEAGVQKLVLTSSASVVFEGTDIKNGTEDLPYAKKPIDYYTETKILQEKEVLSAN 159
Query: 246 NHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305
+ T +R ++GP R + GK + DG ++ DFTY+++
Sbjct: 160 DPDNNFFTTAIRPHGIFGP--RDPQLVPILIQAAKSGKMKFIIG--DGKNLV-DFTYVEN 214
Query: 306 IVKGCLAGLDTAXXXXXXXXXXXXPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKV 365
+V G + + P + F++ N P+P +S + L A
Sbjct: 215 VVHGHILAAE--------HLRKDSPVCGKAFHITNDEPIPFWAFMSRILTGLNYDAPKYY 266
Query: 366 LP 367
+P
Sbjct: 267 IP 268
Score = 52 (23.4 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 71 STRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGV 106
+T RST G +V G +GF+G H+ L +G V
Sbjct: 2 ATHFRST-GKKCVVIGGSGFLGQHMVEKLLDKGYSV 36
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 13/62 (20%), Positives = 31/62 (50%)
Query: 346 VSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVR 405
+S ++ LL ++ +K + + G F + + A+R++GY P L+ + + ++
Sbjct: 279 LSLVLWLLSPLIIIKPTFTPMRVALAGT--FHYYSCERAKRDMGYKPVVSLDEAIDRTLQ 336
Query: 406 WY 407
Y
Sbjct: 337 SY 338
>UNIPROTKB|Q9H2F3 [details] [associations]
symbol:HSD3B7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=NAS] [GO:0006699 "bile acid
biosynthetic process" evidence=TAS] [GO:0005575
"cellular_component" evidence=ND] [GO:0005789 "endoplasmic
reticulum membrane" evidence=TAS] [GO:0008206 "bile acid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] Reactome:REACT_111217 InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
EMBL:AF277719 EMBL:AK057436 EMBL:AK290950 EMBL:AK292068
EMBL:AC135048 EMBL:CH471192 EMBL:BC004929 IPI:IPI00065225
IPI:IPI00106783 RefSeq:NP_001136249.1 RefSeq:NP_001136250.1
RefSeq:NP_079469.2 UniGene:Hs.460618 ProteinModelPortal:Q9H2F3
SMR:Q9H2F3 IntAct:Q9H2F3 STRING:Q9H2F3 PhosphoSite:Q9H2F3
DMDM:47605550 PaxDb:Q9H2F3 PRIDE:Q9H2F3 DNASU:80270
Ensembl:ENST00000262520 Ensembl:ENST00000297679
Ensembl:ENST00000353250 GeneID:80270 KEGG:hsa:80270 UCSC:uc002eaf.2
CTD:80270 GeneCards:GC16P030997 H-InvDB:HIX0038797 HGNC:HGNC:18324
HPA:HPA050521 MIM:607764 MIM:607765 neXtProt:NX_Q9H2F3
Orphanet:79301 PharmGKB:PA134940289 InParanoid:Q9H2F3 KO:K12408
OMA:PCGLRLV OrthoDB:EOG4N5VX7 PhylomeDB:Q9H2F3 BindingDB:Q9H2F3
ChEMBL:CHEMBL3600 GenomeRNAi:80270 NextBio:70733
ArrayExpress:Q9H2F3 Bgee:Q9H2F3 CleanEx:HS_HSD3B7
Genevestigator:Q9H2F3 GermOnline:ENSG00000099377 GO:GO:0047016
GO:GO:0006699 GO:GO:0001558 Uniprot:Q9H2F3
Length = 369
Score = 118 (46.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 44/150 (29%), Positives = 68/150 (45%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
L LVTG GF+G HV L +R + L F+ + L++ + G + V I D
Sbjct: 10 LVYLVTGGCGFLGEHVVRMLLQREPRLGELRVFDQHLGPWLEELKTGPVR---VTAIQGD 66
Query: 140 INDKSLLDKIFNVVAFTHVM-HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+ ++ VA HV+ H A V + +P + E N+ G N++E C + +
Sbjct: 67 VTQAH---EVAAAVAGAHVVIHTAGLVDV-FGRASPKTIHEVNVQGTRNVIEACVQTGTR 122
Query: 199 PAIVWASSSSVYGVNKKV-PFSEKDRTDQP 227
+V+ SS V G N K PF + D P
Sbjct: 123 -FLVYTSSMEVVGPNTKGHPFY-RGNEDTP 150
Score = 42 (19.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 384 AQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
AQR GY P E + + W + SA
Sbjct: 338 AQRHFGYEPLFSWEDSRTRTILWVQAATGSA 368
>UNIPROTKB|Q5QP01 [details] [associations]
symbol:HSD3B2 "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AL359553 UniGene:Hs.654399 HGNC:HGNC:5218 GO:GO:0016853
IPI:IPI00642070 SMR:Q5QP01 STRING:Q5QP01 Ensembl:ENST00000433745
Uniprot:Q5QP01
Length = 195
Score = 113 (44.8 bits), Expect = 0.00024, P = 0.00024
Identities = 50/198 (25%), Positives = 85/198 (42%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
G + LVTGA G +G + L + + + + + + L++ L R + V++
Sbjct: 2 GWSCLVTGAGGLLGQRIVRLLVEEKE-LKEIRALDKAFRPELREEFSKLQNRTKLTVLEG 60
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D+ L + V+ V+H A V + + + S + N+ G LLE C +
Sbjct: 61 DILDEPFLKRACQDVSV--VIHTACIIDV-FGVTHRESIMNVNVKGTQLLLEACVQASV- 116
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPA-----SLYAATKKAGE-AI--AHAYNHIYG 250
P ++ SS V G N + ++P + Y +KK E A+ A+ +N G
Sbjct: 117 PVFIYTSSIEVAGPNSYKEIIQNGHEEEPLENTWPTPYPYSKKLAEKAVLAANGWNLKNG 176
Query: 251 --LSITGLRFFTVYGPWG 266
L LR +YG G
Sbjct: 177 DTLYTCALRPTYIYGEGG 194
>DICTYBASE|DDB_G0284553 [details] [associations]
symbol:gmd "GDP-mannose dehydratase" species:44689
"Dictyostelium discoideum" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0008446 "GDP-mannose 4,6-dehydratase activity"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA;ISS] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 dictyBase:DDB_G0284553
GenomeReviews:CM000153_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0005622 EMBL:AAFI02000066 GO:GO:0019673
GO:GO:0042351 eggNOG:COG1089 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 RefSeq:XP_001134543.1 ProteinModelPortal:Q1ZXF7
SMR:Q1ZXF7 STRING:Q1ZXF7 EnsemblProtists:DDB0231676 GeneID:8624624
KEGG:ddi:DDB_G0284553 ProtClustDB:CLSZ2432853 Uniprot:Q1ZXF7
Length = 356
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 54/206 (26%), Positives = 93/206 (45%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKA--RKGLL-ERAGVFVIDA 138
L+TG G GS+++ L +G V G+ +++ T +K + +L E+ + +
Sbjct: 9 LITGITGQDGSYLTEFLISKGYYVHGIIQKIFHHFNTIVKNIYIKIDMLKEKESLTLHYG 68
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D S L I + V T + +L AQ+ V+ + + + G + LL+ +S +
Sbjct: 69 DLTDASNLHSIVSKVNPTEIYNLGAQSHVKVSFDMSEYTGDVDGLGCLRLLDAIRSCGME 128
Query: 199 PAIVW--ASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL-SITG 255
+ + AS+S +YG +++P SE P S YA K+ I Y Y + + G
Sbjct: 129 KKVKYYQASTSELYGKVQEIPQSETTPF-YPRSPYAVAKQYAYWIVVNYREAYDMYACNG 187
Query: 256 LRFFTVYGPWGRPDMAYFFFTRDIIR 281
+ F P P F TR I R
Sbjct: 188 I-LFNHESPRRGPT----FVTRKITR 208
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 108 (43.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 62/234 (26%), Positives = 102/234 (43%)
Query: 83 LVTGAAGFVGSH-VSLALKKRGDGVLGLDN-----FNNYYETSLKKARKGLLERAG-VFV 135
+VTG GF H V + ++ + V D N + ET + G R+G V
Sbjct: 13 VVTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGIL----GEAIRSGRVQY 68
Query: 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
+ AD+ +K+ + K F V H+AA ++ N N+ G N+++ C
Sbjct: 69 VSADLRNKTQVVKGFQGAEV--VFHMAAPDS---SINNHQLQYSVNVQGTTNVIDACIEV 123
Query: 196 DPQPAIVWASSSSVY-GVNKKVPFSEK-DRTDQPASLYAATKKAGEAIAHAYNHIYGLSI 253
+ I +S S V+ GV+ + E + Y+ATK GEA+ N GL
Sbjct: 124 GVKRLIYTSSPSVVFDGVHGTLNADESLPYPPKHNDSYSATKAEGEALILKANGRSGLLT 183
Query: 254 TGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIV 307
+R +++GP G M T GK + + DG++ DFTY++++V
Sbjct: 184 CCIRPSSIFGP-GDKLMVPSLVTA-ARAGK--SKFIIGDGSNFY-DFTYVENVV 232
Score = 54 (24.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 344 VPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHAN----ISLAQRELGYMPTTDLETG 399
+P++ LV L K+L KV P+ V+ N S A+ LGY P L+ G
Sbjct: 293 MPIAYLVELAYKLLGPYG-MKV-PVLTPSRVRLLSCNRTFDSSKAKDRLGYSPVVPLQEG 350
Query: 400 LKKFV 404
+K+ +
Sbjct: 351 IKRTI 355
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 86 (35.3 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 42/189 (22%), Positives = 84/189 (44%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +LVTG GF+G ++ LK G V T K +LE+ G+ +
Sbjct: 1 MKMLVTGGTGFLGQKLAFRLKNMGYEVTA---------TGRNKTIGKVLEQNGIKFVHCP 51
Query: 140 INDKSLLDKIFNVVAFT-HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+ D+ +++ V ++ H A + ++ + +N+ G +++E + +
Sbjct: 52 LEDR---ERVLQVCKDKDYIFHSGAHSSPWGKYED---FYNANVLGTKHIIEGSQKYGIK 105
Query: 199 PAIVWASSSSVYGV-NKKVPFSEKDRT-DQPASLYAATK-KAGEAIAHAYNHIYGLSITG 255
++ S+ S+Y +++ E + D + YA TK A +AI A+ H GL +
Sbjct: 106 -RLIHVSTPSIYFYYDERQNVVENAKLPDTFVNHYATTKYMAEQAIDQAFAH--GLPVIT 162
Query: 256 LRFFTVYGP 264
+R ++GP
Sbjct: 163 IRPRALFGP 171
Score = 74 (31.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 380 NISLAQRELGYMPTTDLETGLKKFVRWY 407
+I A+ ELGY P +E G+ KFV W+
Sbjct: 298 SIDKAKEELGYAPKVSIEEGITKFVDWW 325
>UNIPROTKB|Q4K6F9 [details] [associations]
symbol:rfbG "CDP-glucose-4,6-dehydratase" species:220664
"Pseudomonas protegens Pf-5" [GO:0009243 "O antigen biosynthetic
process" evidence=ISS] [GO:0047733 "CDP-glucose 4,6-dehydratase
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0009243
RefSeq:YP_262174.1 ProteinModelPortal:Q4K6F9 SMR:Q4K6F9
STRING:Q4K6F9 GeneID:3479503 KEGG:pfl:PFL_5095 PATRIC:19879659
HOGENOM:HOG000167999 KO:K01709 OMA:KCYENKE ProtClustDB:CLSK715086
BioCyc:PFLU220664:GIX8-5136-MONOMER GO:GO:0047733
InterPro:IPR013445 PANTHER:PTHR10366:SF33 TIGRFAMs:TIGR02622
Uniprot:Q4K6F9
Length = 361
Score = 95 (38.5 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 48/189 (25%), Positives = 83/189 (43%)
Query: 69 VKST-RPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKAR--K 125
+K+T P +G V +TG GF GS ++L L+ G V G A K
Sbjct: 1 MKATVTPAFWQGKKVFLTGHTGFKGSWLALWLQSMGAQVQGFALMPPTTPALFDVANVVK 60
Query: 126 GLLERAGVFVIDADINDKSLLDKIFNVVAFTH--VMHLAAQAGVRYAMQNPNSYVESNIA 183
G+ G DI D + ++V F ++H+AAQ VR + + P +N+
Sbjct: 61 GMQSCIG------DIRDLQAITH--SMVGFNPDVLIHMAAQPLVRLSYREPLETYATNVM 112
Query: 184 GFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPAS---LYAATKKAGEA 240
G +++LE + AIV ++ Y N++ + ++ D+P Y+ +K E
Sbjct: 113 GTLHVLEAARLCPNLRAIVNVTTDKCYE-NREWEWGYRE--DEPMGGHDPYSNSKGCVEL 169
Query: 241 IAHAYNHIY 249
I +Y + +
Sbjct: 170 ITASYRNSF 178
Score = 65 (27.9 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 373 DVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
+ + +IS A+ L + PT +LE L + V+W+ ++ + A
Sbjct: 298 EANYLKLDISKARARLNWAPTWNLEKTLSRIVQWHRAFLSGA 339
>MGI|MGI:96234 [details] [associations]
symbol:Hsd3b2 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 2" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96234 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
BRENDA:1.1.1.145 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0031966 GO:GO:0006694
BRENDA:5.3.3.1 CTD:3284 EMBL:AL606755 EMBL:BC026757 EMBL:BC040397
EMBL:M75886 IPI:IPI00230105 RefSeq:NP_694873.2 UniGene:Mm.482364
ProteinModelPortal:P26149 SMR:P26149 STRING:P26149
PhosphoSite:P26149 PaxDb:P26149 PRIDE:P26149
Ensembl:ENSMUST00000107021 Ensembl:ENSMUST00000107022
Ensembl:ENSMUST00000177651 GeneID:15493 KEGG:mmu:15493
GeneTree:ENSGT00550000074557 InParanoid:B1ARN7 OMA:HEEECHE
NextBio:288370 Bgee:P26149 Genevestigator:P26149
GermOnline:ENSMUSG00000063730 Uniprot:P26149
Length = 373
Score = 109 (43.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 47/173 (27%), Positives = 78/173 (45%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
G + LVTGA GF+G + L + D + + + + +K L V V++
Sbjct: 3 GWSCLVTGAGGFLGQRIIQLLVQEED-LEEIRVLDKVFRPETRKEFFNLETSIKVTVLEG 61
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D L + ++ V+H AA V + + ++ N+ G NLLE C +
Sbjct: 62 DILDTQYLRRACQGISV--VIHTAAIIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 199 PAIVWASSSSVYGVN--KKVPFS--EKDRTDQPAS-LYAATKKAGEAIAHAYN 246
PA +++SS V G N K++ + E++ + S Y +KK E A N
Sbjct: 118 PAFIFSSSVDVAGPNSYKEIVLNGHEEECHESTWSDPYPYSKKMAEKAVLAAN 170
Score = 50 (22.7 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
AQR+LGY P E +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 103 (41.3 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 35/139 (25%), Positives = 63/139 (45%)
Query: 173 NPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVY-GVNKKVPFSEKDRTDQPASLY 231
N + N G N++ETCK + Q I+ +S+S ++ GV+ K + +P Y
Sbjct: 96 NKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGVDIKNGTEDLPYATKPIDYY 155
Query: 232 AATKKAGE-AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEA 290
TK E A+ A++ T +R ++GP R +GK +
Sbjct: 156 TETKILQERAVLGAHDPEKNFLTTAIRPHGIFGP--RDPQLVPILIEAAKKGKM--KFMI 211
Query: 291 PDGASVARDFTYIDDIVKG 309
+G ++ DFT+++++V G
Sbjct: 212 GNGKNLV-DFTFVENVVHG 229
Score = 46 (21.3 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 13/60 (21%), Positives = 30/60 (50%)
Query: 346 VSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVR 405
VS LV ++ +++++ + + G F + + A++ +GY P ++ + K VR
Sbjct: 290 VSLLVMVISPVIQLQPTFTPMRVALAGT--FHYYSCEKAKKLMGYRPLVTMDDAVDKTVR 347
Score = 45 (20.9 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGV 106
P++ R TV+ G GF+G H+ L RG V
Sbjct: 18 PKAKR-CTVI--GGCGFLGQHMVEQLLARGYAV 47
>RGD|628727 [details] [associations]
symbol:Hsd3b7 "hydroxy-delta-5-steroid dehydrogenase, 3 beta- and
steroid delta-isomerase 7" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IDA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=TAS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0047016 "cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase
activity" evidence=IDA] InterPro:IPR002225 Pfam:PF01073
UniPathway:UPA00062 InterPro:IPR016040 RGD:628727 GO:GO:0043231
GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694
CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558 EMBL:AB000199
IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 110 (43.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 47/186 (25%), Positives = 80/186 (43%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
L LVTG GF+G H+ L + + L F+ + + L++ + G ++ V I D
Sbjct: 10 LVYLVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKTGPVQ---VTAIQGD 66
Query: 140 INDKSLLDKIFNVVAFTHVM-HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+ ++ +A +HV+ H A V + +P + + N+ G N+++ C + +
Sbjct: 67 VTQAH---EVAAAMAGSHVVIHTAGLVDV-FGKASPETIHKVNVQGTQNVIDACVQTGTR 122
Query: 199 PAIVWASSSSVYGVNKKV-PFSEKDRTDQPASL-----YAATKKAGEAIAHAYNHIYGLS 252
+V+ SS V G N K PF + D P Y +K E + N GL
Sbjct: 123 -LLVYTSSMEVVGPNVKGHPFY-RGNEDTPYEAIHRHPYPCSKALAEQLVLEANGRKGLR 180
Query: 253 ITGLRF 258
G F
Sbjct: 181 FGGRLF 186
Score = 47 (21.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
FT + + AQR GY P E + + W + SA
Sbjct: 300 FT-VSTNKAQRHFGYKPLFSWEESRARTIHWVQAMEGSA 337
>UNIPROTKB|O35048 [details] [associations]
symbol:Hsd3b7 "3 beta-hydroxysteroid dehydrogenase type 7"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:628727
GO:GO:0043231 GO:GO:0016021 eggNOG:COG0451 HOVERGEN:HBG000014
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0006694 CTD:80270 KO:K12408 GO:GO:0047016 GO:GO:0001558
EMBL:AB000199 IPI:IPI00205271 RefSeq:NP_647545.1 UniGene:Rn.11380
ProteinModelPortal:O35048 STRING:O35048 PhosphoSite:O35048
PRIDE:O35048 GeneID:246211 KEGG:rno:246211 UCSC:RGD:628727
NextBio:623487 Genevestigator:O35048 GO:GO:0008206 Uniprot:O35048
Length = 338
Score = 110 (43.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 47/186 (25%), Positives = 80/186 (43%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
L LVTG GF+G H+ L + + L F+ + + L++ + G ++ V I D
Sbjct: 10 LVYLVTGGCGFLGEHIVRMLLEWEPRLRELRVFDLHLSSWLEELKTGPVQ---VTAIQGD 66
Query: 140 INDKSLLDKIFNVVAFTHVM-HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
+ ++ +A +HV+ H A V + +P + + N+ G N+++ C + +
Sbjct: 67 VTQAH---EVAAAMAGSHVVIHTAGLVDV-FGKASPETIHKVNVQGTQNVIDACVQTGTR 122
Query: 199 PAIVWASSSSVYGVNKKV-PFSEKDRTDQPASL-----YAATKKAGEAIAHAYNHIYGLS 252
+V+ SS V G N K PF + D P Y +K E + N GL
Sbjct: 123 -LLVYTSSMEVVGPNVKGHPFY-RGNEDTPYEAIHRHPYPCSKALAEQLVLEANGRKGLR 180
Query: 253 ITGLRF 258
G F
Sbjct: 181 FGGRLF 186
Score = 47 (21.6 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/39 (30%), Positives = 17/39 (43%)
Query: 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
FT + + AQR GY P E + + W + SA
Sbjct: 300 FT-VSTNKAQRHFGYKPLFSWEESRARTIHWVQAMEGSA 337
>MGI|MGI:96235 [details] [associations]
symbol:Hsd3b3 "hydroxy-delta-5-steroid dehydrogenase, 3 beta-
and steroid delta-isomerase 3" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0016616 "oxidoreductase activity,
acting on the CH-OH group of donors, NAD or NADP as acceptor"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 MGI:MGI:96235 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 OrthoDB:EOG4K3KWG
GO:GO:0005743 GO:GO:0003854 GO:GO:0000166 GO:GO:0004769
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0006694 OMA:WVFPRIA
GeneTree:ENSGT00550000074557 EMBL:M77015 IPI:IPI00111855
RefSeq:NP_001155214.1 RefSeq:NP_001155215.1 RefSeq:NP_001155216.1
RefSeq:NP_001155217.1 UniGene:Mm.158717 ProteinModelPortal:P26150
SMR:P26150 STRING:P26150 PaxDb:P26150 PRIDE:P26150
Ensembl:ENSMUST00000090743 Ensembl:ENSMUST00000107018
Ensembl:ENSMUST00000107019 GeneID:15494 KEGG:mmu:15494 CTD:15494
InParanoid:P26150 SABIO-RK:P26150 NextBio:288374 Bgee:P26150
Genevestigator:P26150 GermOnline:ENSMUSG00000062410 Uniprot:P26150
Length = 373
Score = 107 (42.7 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 45/173 (26%), Positives = 77/173 (44%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
G + LVTGA GF+G + L + D + + + ++ ++ L V V++
Sbjct: 3 GWSCLVTGAGGFLGQRIIQLLVQEKD-LEEIRVLDKVFKPETREQFFNLGTSIKVTVLEG 61
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D L + ++ V+H AA V + + ++ N+ G NLLE C +
Sbjct: 62 DILDTQYLRRACQGISV--VIHTAAIIDVTGVIPR-QTILDVNLKGTQNLLEACIQASV- 117
Query: 199 PAIVWASSSSVYGVN--KKVPFS---EKDRTDQPASLYAATKKAGEAIAHAYN 246
PA +++SS V G N K + + ++ R + Y +KK E A N
Sbjct: 118 PAFIFSSSVDVAGPNSYKDIVLNGHEDEHRESTWSDPYPYSKKMAEKAVLAAN 170
Score = 51 (23.0 bits), Expect = 0.00049, Sum P(2) = 0.00049
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 343 PVPVSR-LVSLLEKILKVKAET-KVLPLPRNGD-VQFTHANISL----AQRELGYMPTTD 395
PVP+ L LLE + + + + +P P N V T + + AQR+LGY P
Sbjct: 287 PVPILYWLAFLLETVSFLLSPIYRYIP-PFNRHLVTLTASTFTFSYKKAQRDLGYEPLVS 345
Query: 396 LETGLKKFVRW 406
E +K W
Sbjct: 346 WEEAKQKTSEW 356
>TAIR|locus:2119161 [details] [associations]
symbol:FLDH "farnesol dehydrogenase" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006721 "terpenoid
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009788 "negative regulation of abscisic acid mediated
signaling pathway" evidence=IMP] [GO:0016487 "farnesol metabolic
process" evidence=IDA] [GO:0047886 "farnesol dehydrogenase
activity" evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0034976 "response to endoplasmic reticulum stress"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005783 GO:GO:0005886 GO:GO:0005774 EMBL:CP002687
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AL035678
EMBL:AL161583 GO:GO:0009788 UniGene:At.46532 UniGene:At.66644
UniGene:At.68114 GO:GO:0016487 EMBL:AF370578 EMBL:BT002342
IPI:IPI00530523 PIR:T05987 RefSeq:NP_195062.1 HSSP:Q8T8E9
ProteinModelPortal:Q9SZB3 SMR:Q9SZB3 IntAct:Q9SZB3 STRING:Q9SZB3
PRIDE:Q9SZB3 EnsemblPlants:AT4G33360.1 GeneID:829473
KEGG:ath:AT4G33360 TAIR:At4g33360 HOGENOM:HOG000168005
InParanoid:Q9SZB3 KO:K15891 OMA:EVELAYG PhylomeDB:Q9SZB3
ProtClustDB:CLSN2685493 ArrayExpress:Q9SZB3 Genevestigator:Q9SZB3
GO:GO:0047886 Uniprot:Q9SZB3
Length = 344
Score = 116 (45.9 bits), Expect = 0.00051, P = 0.00051
Identities = 85/353 (24%), Positives = 149/353 (42%)
Query: 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI 136
T + +LVTG+ G++G+ + L +RG V L TS +E A
Sbjct: 10 TENMKILVTGSTGYLGARLCHVLLRRGHSVRALVR-----RTSDLSDLPPEVELAY---- 60
Query: 137 DADIND-KSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
D+ D +SL D V H AA V + +P+ ++ N+ G N+LE K +
Sbjct: 61 -GDVTDYRSLTDACSGCDI---VFHAAAL--VEPWLPDPSRFISVNVGGLKNVLEAVKET 114
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQP--ASLYAATKKAGEAIA-HAYNHIYGLS 252
I++ SS G +E ++ + Y +K + +A +A + G+
Sbjct: 115 KTVQKIIYTSSFFALGSTDGSVANENQVHNERFFCTEYERSKAVADKMALNAASE--GVP 172
Query: 253 ITGLRFFTVYGPWGRPDMAYFFFTRDIIR-GKRITVYEAPDGASVAR-DFTYIDDIVKGC 310
I L ++GP G+ A I R R+ Y G+ R F+++DD+V+G
Sbjct: 173 IILLYPGVIFGP-GKLTSANMVARMLIERFNGRLPGYI---GSGTDRYSFSHVDDVVEGH 228
Query: 311 LAGLDTAXXXXXXXXXXXXPAEFR-IFNL-----GNTTP---VPVSRLVSLLEKILKVKA 361
+A ++ A F+ +F++ G P +P+ + + + +
Sbjct: 229 VAAMEKGRLGERYLLTGEN-ASFKLVFDMAALITGTKKPNFSIPLWAINAYGWLSVLISR 287
Query: 362 ETKVLPL--PRNGDV---QFTHANISLAQRELGYMPTTDLETGLKKFVRWYLS 409
T LPL P V Q++++ A+ ELGY P + L+ GL++ + W S
Sbjct: 288 VTGKLPLISPPTVTVLRHQWSYS-CDKAKLELGYNPRS-LKEGLEEMLPWLKS 338
>UNIPROTKB|Q4K8G6 [details] [associations]
symbol:PFL_4375 "NAD dependent epimerase/dehydratase family
protein" species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0044237
HOGENOM:HOG000218208 RefSeq:YP_261467.1 ProteinModelPortal:Q4K8G6
STRING:Q4K8G6 GeneID:3478498 KEGG:pfl:PFL_4375 PATRIC:19878178
OMA:VFGAPFP ProtClustDB:CLSK2301589
BioCyc:PFLU220664:GIX8-4410-MONOMER Uniprot:Q4K8G6
Length = 324
Score = 115 (45.5 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 54/204 (26%), Positives = 85/204 (41%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE-TSLKKARKGLLERAGVFVIDA 138
+ +LVTGAAGF+G + AL +RG + T+ + L+ V V
Sbjct: 1 MNILVTGAAGFLGRRLIQALLERGSLTDRHGQLHPIQRITAFDRDPVQGLDDPRVQVKGG 60
Query: 139 DINDKSLLDKIFNVVAFTH-VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D +L + + A T + HLAA + A + + + N + LLE +
Sbjct: 61 DITDPQVLANLID--ANTQGIFHLAAVVSSQ-AESDFDLGMRVNFSATQGLLERARQLGT 117
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
P V SS +V+G + D+ P S Y K + + Y+ + LR
Sbjct: 118 CPKWVMTSSVAVFGGQLPDTVGD-DQVWSPQSSYGTQKAMNDLLLADYSRRGFVDGRSLR 176
Query: 258 FFTVYGPWGRPDMAYFFFTRDIIR 281
T+ G+P++A F IIR
Sbjct: 177 MPTIVVRPGKPNLAASSFASGIIR 200
Score = 40 (19.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 387 ELGYMPTTDLETGLKKFVRWYL 408
+LG+ D + +++F+R YL
Sbjct: 301 QLGFTADPDFASVIRQFIRDYL 322
>UNIPROTKB|F6XJP3 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 OMA:IQLQPTF
Ensembl:ENSCAFT00000030435 EMBL:AAEX03027066
ProteinModelPortal:F6XJP3 Uniprot:F6XJP3
Length = 361
Score = 97 (39.2 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 35/139 (25%), Positives = 61/139 (43%)
Query: 173 NPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVY-GVNKKVPFSEKDRTDQPASLY 231
N + N G N++ETCK + Q I+ +S+S ++ GVN K + +P Y
Sbjct: 101 NKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVIFEGVNIKNGTEDLPYAMKPIDYY 160
Query: 232 AATKKAGE-AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEA 290
TK E A+ A + +R ++GP R +GK +
Sbjct: 161 TETKILQERAVLDANDPKRNFLTMAIRPHGIFGP--RDPQLVPILIEAARKGKM--KFMI 216
Query: 291 PDGASVARDFTYIDDIVKG 309
+G ++ DFT+++++V G
Sbjct: 217 GNGENLV-DFTFVENVVHG 234
Score = 48 (22.0 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 14/36 (38%), Positives = 17/36 (47%)
Query: 72 TRPRSTRGLT----VLVTGAAGFVGSHVSLALKKRG 103
TR T GL V G +GF+G H+ L RG
Sbjct: 14 TRTHLTEGLPNASKCTVIGGSGFLGQHMVEQLLARG 49
Score = 48 (22.0 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 13/60 (21%), Positives = 31/60 (51%)
Query: 346 VSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVR 405
VS LV LL +++++ + + G F + + A++ +GY P ++ +++ V+
Sbjct: 295 VSLLVMLLSPVIQLQPTFTPMRVALAGT--FHYYSCERARKVMGYRPLVTMDDAIERTVQ 352
>UNIPROTKB|F1P299 [details] [associations]
symbol:GMDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0007219 "Notch signaling
pathway" evidence=ISS] [GO:0042351 "'de novo' GDP-L-fucose
biosynthetic process" evidence=ISS] [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0019673 "GDP-mannose
metabolic process" evidence=ISS] [GO:0070401 "NADP+ binding"
evidence=ISS] InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 Gene3D:3.40.50.720 GO:GO:0007219 GO:GO:0005622
GO:GO:0070401 GO:GO:0019673 GO:GO:0042351 GO:GO:0008446
TIGRFAMs:TIGR01472 GeneTree:ENSGT00440000033640 OMA:IAYNLTD
EMBL:AADN02036511 EMBL:AADN02036512 EMBL:AADN02036513
EMBL:AADN02036514 EMBL:AADN02036515 EMBL:AADN02036516
EMBL:AADN02036517 EMBL:AADN02036518 IPI:IPI00578850
Ensembl:ENSGALT00000020945 Uniprot:F1P299
Length = 358
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 47/184 (25%), Positives = 86/184 (46%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGL----DNFNNYYETSLKKARKGLLERAGVFVIDA 138
L+TG G GS+++ L ++G V G+ +FN L K + +E + +
Sbjct: 13 LITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNSQAHIE-GNMKLHYG 71
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ D + L KI N V + +L AQ+ V+ + + + G + LL+ K+
Sbjct: 72 DLTDSTCLVKIINEVKPNEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAIKTCGLI 131
Query: 199 PAIVW--ASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SIT 254
++ + AS+S ++G +++P +K+ T P S Y A K I + Y L ++
Sbjct: 132 NSVKFYQASTSELFGKVQEIP--QKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVN 189
Query: 255 GLRF 258
G+ F
Sbjct: 190 GILF 193
>TAIR|locus:2033394 [details] [associations]
symbol:AT1G66800 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0009809 "lignin biosynthetic
process" evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0045551 "cinnamyl-alcohol dehydrogenase activity"
evidence=ISS] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 EMBL:CP002684
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GO:GO:0004022 IPI:IPI00547436 RefSeq:NP_176852.2 UniGene:At.18879
UniGene:At.65499 ProteinModelPortal:F4HQ07 SMR:F4HQ07 PRIDE:F4HQ07
EnsemblPlants:AT1G66800.1 GeneID:842998 KEGG:ath:AT1G66800
OMA:GIEFTPI Uniprot:F4HQ07
Length = 319
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 54/214 (25%), Positives = 93/214 (43%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLG-LDNFNNYYETSLKKARKGLLERAGVFVID 137
G V VTGA+G++ S + L RG V + N + +T+ +G ER +F
Sbjct: 5 GKVVCVTGASGYIASWIVKLLLLRGYTVRATVRNPMDTKKTNHLLTLEGASERLKLF--K 62
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNS-YVESNIAGFVNLLETC-KSS 195
+D+ ++ D+ + V H A+ V + +P + ++ + G +N+L TC K S
Sbjct: 63 SDLLEEGSFDQA--IEGCDGVFHTASP--VSLTVTDPQTEMIDPAVNGTLNVLRTCAKVS 118
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL-----YAATKKAGEAIAHAYNHIYG 250
+ IV +S+++ +N E TD L Y +K E A + G
Sbjct: 119 SVKRVIVTSSTAATLSINPNDVVDETVFTDLSVYLAMKAWYGYSKTLAEETAWRFAKENG 178
Query: 251 LSITGLRFFTVYGPWGRPDMAYFF-FTRDIIRGK 283
+ + + V GP +P + Y D+I GK
Sbjct: 179 IDLVVMNPGNVIGPVLQPTLNYSVEVIVDLINGK 212
>UNIPROTKB|P0AC88 [details] [associations]
symbol:gmd "GDP-mannose 4,6-dehydratase" species:83333
"Escherichia coli K-12" [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0016829 "lyase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0008446 "GDP-mannose 4,6-dehydratase activity" evidence=IEA]
[GO:0009242 "colanic acid biosynthetic process" evidence=IEA]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
UniPathway:UPA00128 UniPathway:UPA00980 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0005622 GO:GO:0009103 GO:GO:0019673 GO:GO:0042351 EMBL:U38473
GO:GO:0009242 eggNOG:COG1089 KO:K01711 OMA:INPKYFR GO:GO:0008446
TIGRFAMs:TIGR01472 PIR:D64971 RefSeq:NP_416557.1 RefSeq:YP_490295.1
PDB:1DB3 PDBsum:1DB3 ProteinModelPortal:P0AC88 SMR:P0AC88
DIP:DIP-48216N IntAct:P0AC88 EnsemblBacteria:EBESCT00000004343
EnsemblBacteria:EBESCT00000015616 GeneID:12930696 GeneID:946562
KEGG:ecj:Y75_p2016 KEGG:eco:b2053 PATRIC:32119439 EchoBASE:EB1735
EcoGene:EG11787 HOGENOM:HOG000168003 ProtClustDB:CLSK880276
BioCyc:EcoCyc:GDPMANDEHYDRA-MONOMER
BioCyc:ECOL316407:JW2038-MONOMER
BioCyc:MetaCyc:GDPMANDEHYDRA-MONOMER EvolutionaryTrace:P0AC88
Genevestigator:P0AC88 Uniprot:P0AC88
Length = 373
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00076
Identities = 46/182 (25%), Positives = 83/182 (45%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLLERAGVFVID-ADI 140
L+TG G GS+++ L ++G V G+ + + T + + F + D+
Sbjct: 6 LITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDL 65
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK--SSDPQ 198
+D S L +I V V +L A + V + ++P + + G + LLE + + +
Sbjct: 66 SDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKK 125
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTD-QPASLYAATKKAGEAIAHAYNHIYGL-SITGL 256
AS+S +YG+ +++P +K+ T P S YA K I Y YG+ + G+
Sbjct: 126 TRFYQASTSELYGLVQEIP--QKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNGI 183
Query: 257 RF 258
F
Sbjct: 184 LF 185
>RGD|1592771 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid
dehydrogenase/delta-5-delta-4 isomerase type II" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0004769 "steroid delta-isomerase activity"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 UniPathway:UPA00062
InterPro:IPR016040 RGD:1592771 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG
GO:GO:0003854 GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720
GO:GO:0005789 GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 106 (42.4 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 79 GLTVLVTGAAGFVGSHV--SLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI 136
G + LVTGA GFVG + L +K V LD + K+ L +A V ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
+ DI D L + ++ V+H A+ + + ++ N+ G NLLE +
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTASVMDFSRVLPR-QTILDVNLKGTQNLLEAGIHAS 116
Query: 197 PQPAIVWASSSSVYGVN--KKVPFSEKDRTDQPASL---YAATKKAGE-AIAHAYNHIY- 249
PA ++ S+ V G N KK + ++ ++ Y +KK E A+ A I
Sbjct: 117 V-PAFIYCSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEKAVLAANGSILK 175
Query: 250 -G--LSITGLRFFTVYGPWGR 267
G L LR +YG G+
Sbjct: 176 NGGTLHTCALRPMYIYGERGQ 196
Score = 50 (22.7 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
AQR+LGY P E +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>UNIPROTKB|P22072 [details] [associations]
symbol:Hsd3b "3 beta-hydroxysteroid dehydrogenase/Delta
5-->4-isomerase type 2" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR002225
Pfam:PF01073 UniPathway:UPA00062 InterPro:IPR016040 RGD:1592771
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989
HOVERGEN:HBG000014 KO:K00070 OrthoDB:EOG4K3KWG GO:GO:0003854
GO:GO:0000166 GO:GO:0004769 Gene3D:3.40.50.720 GO:GO:0005789
GO:GO:0031966 GO:GO:0006694 UniGene:Rn.128814
GermOnline:ENSRNOG00000019454 EMBL:M38179 EMBL:S63167
IPI:IPI00554001 PIR:A40378 PIR:B39051 RefSeq:NP_001036084.1
ProteinModelPortal:P22072 STRING:P22072 PhosphoSite:P22072
GeneID:682974 KEGG:rno:682974 UCSC:RGD:1592771 CTD:111785
InParanoid:P22072 BindingDB:P22072 ChEMBL:CHEMBL4821 NextBio:724140
ArrayExpress:P22072 Genevestigator:P22072 Uniprot:P22072
Length = 373
Score = 106 (42.4 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 54/201 (26%), Positives = 86/201 (42%)
Query: 79 GLTVLVTGAAGFVGSHV--SLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI 136
G + LVTGA GFVG + L +K V LD + K+ L +A V ++
Sbjct: 3 GWSCLVTGAGGFVGQRIIRMLVQEKELQEVRALDKV---FRPETKEEFSKLQTKAKVTML 59
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
+ DI D L + ++ V+H A+ + + ++ N+ G NLLE +
Sbjct: 60 EGDILDAQYLRRACQGISV--VIHTASVMDFSRVLPR-QTILDVNLKGTQNLLEAGIHAS 116
Query: 197 PQPAIVWASSSSVYGVN--KKVPFSEKDRTDQPASL---YAATKKAGE-AIAHAYNHIY- 249
PA ++ S+ V G N KK + ++ ++ Y +KK E A+ A I
Sbjct: 117 V-PAFIYCSTVDVAGPNSYKKTILNGREEEHHESTWSNPYPYSKKMAEKAVLAANGSILK 175
Query: 250 -G--LSITGLRFFTVYGPWGR 267
G L LR +YG G+
Sbjct: 176 NGGTLHTCALRPMYIYGERGQ 196
Score = 50 (22.7 bits), Expect = 0.00080, Sum P(2) = 0.00080
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 384 AQRELGYMPTTDLETGLKKFVRW 406
AQR+LGY P E +K W
Sbjct: 334 AQRDLGYEPLVSWEEAKQKTSEW 356
>POMBASE|SPBC3F6.02c [details] [associations]
symbol:SPBC3F6.02c "3 beta-hydroxysteroid
dehydrogenase/delta 5-->4-isomerase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000252 "C-3 sterol dehydrogenase
(C-4 sterol decarboxylase) activity" evidence=ISO] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006696 "ergosterol
biosynthetic process" evidence=ISO] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IEA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 PomBase:SPBC3F6.02c GO:GO:0005783
GO:GO:0005794 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006696 PIR:T40392
RefSeq:NP_596741.1 ProteinModelPortal:O43050 STRING:O43050
PRIDE:O43050 EnsemblFungi:SPBC3F6.02c.1 GeneID:2540634
KEGG:spo:SPBC3F6.02c KO:K07748 OMA:PQVTRYR OrthoDB:EOG4DNJD4
NextBio:20801759 GO:GO:0000252 GO:GO:0047012 Uniprot:O43050
Length = 340
Score = 95 (38.5 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 57/244 (23%), Positives = 104/244 (42%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVI-DA 138
+VLV G+ GF+G H+ L +R + + D F N K L E G F +
Sbjct: 5 SVLVIGS-GFLGGHIIRQLCERENLRIAAFDLFEN---------EKLLHELHGQFTMYTG 54
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ + ++++F V+H A+ + + + Y E N+ G N+++ C+ +
Sbjct: 55 DLTKQGDIERVFEEFHPRVVIHTASPV---HNLAR-DIYFEVNVDGTANIIKACQKFNVD 110
Query: 199 PAIVWASSSSVY-------GVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
A+V+ SS+ V V++ P E S A K+ EA + + L
Sbjct: 111 -ALVYTSSAGVVFNGADLINVDESQPIPEVHMDAYNESKALAEKQVLEASSES------L 163
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311
LR ++GP R + +++ + T ++ D ++ DFTYI++ L
Sbjct: 164 KTAALRVAGLFGPGDRQLVPGML---SVLKNGQ-TKFQLGDNLNLF-DFTYIENAAYAHL 218
Query: 312 AGLD 315
+D
Sbjct: 219 LAMD 222
Score = 60 (26.2 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 374 VQFTHAN----ISLAQRELGYMPTTDLETGLKKFVRW 406
VQF+ AN I A+ L Y P DLE G+++ + W
Sbjct: 297 VQFSCANRYFNIQKAEDVLKYHPIVDLEEGIRRTLAW 333
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 424 400 0.00098 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 210
No. of states in DFA: 611 (65 KB)
Total size of DFA: 245 KB (2132 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 30.37u 0.09s 30.46t Elapsed: 00:00:10
Total cpu time: 30.43u 0.09s 30.52t Elapsed: 00:00:11
Start: Fri May 10 06:51:25 2013 End: Fri May 10 06:51:36 2013
WARNINGS ISSUED: 1