BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042406
(424 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81312|GAE3_ARATH UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2
SV=1
Length = 430
Score = 625 bits (1611), Expect = e-178, Method: Compositional matrix adjust.
Identities = 303/429 (70%), Positives = 352/429 (82%), Gaps = 12/429 (2%)
Query: 1 MLHLDRTPSTAGNKLKPEKFHNHRLRS---KLAVWSFLFLTVFLFFFLISPSPS------ 51
M HLD PST G K KP FH R +S KLA WS +F+ + FF SP S
Sbjct: 4 MSHLDDIPSTPG-KFKPY-FHRTRWQSSVAKLAFWSLVFVGLIFIFFYRSPVSSNPADPS 61
Query: 52 -ATFRRHSSGGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLD 110
+ R +S GGP WEK++ S R R+ RG +VLVTGAAGFVG+HVS ALK+RGDGVLGLD
Sbjct: 62 RRSLRTYSWGGPAWEKRVRSSARLRTRRGFSVLVTGAAGFVGTHVSAALKRRGDGVLGLD 121
Query: 111 NFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYA 170
NFN+YY+ SLK+AR+ LLER+GVFV++ DIND +LL K+F VV FTHVMHLAAQAGVRYA
Sbjct: 122 NFNDYYDPSLKRARQALLERSGVFVVEGDINDAALLKKLFEVVPFTHVMHLAAQAGVRYA 181
Query: 171 MQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL 230
M+NP+SYV SNIAGFVNLLE CKS++PQPAIVWASSSSVYG+N KVPFSEKDRTDQPASL
Sbjct: 182 MENPSSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPASL 241
Query: 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEA 290
YAATKKAGE IAH YNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFTRDI++GK I+++E
Sbjct: 242 YAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIFEG 301
Query: 291 PDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLV 350
+ +VARDFTYIDDIVKGCL LDTA+KSTGSGGKK+G A+ R+FNLGNT+PVPV+ LV
Sbjct: 302 VNHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLV 361
Query: 351 SLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410
++LE++LKVKA+ ++ LPRNGDVQFTHANIS AQRELGY PTTDL+TGLKKF RWYL Y
Sbjct: 362 TILERLLKVKAKRNIMKLPRNGDVQFTHANISSAQRELGYKPTTDLQTGLKKFARWYLGY 421
Query: 411 YNSASASPS 419
YN + S
Sbjct: 422 YNGGKKAAS 430
>sp|Q9LPC1|GAE2_ARATH UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2
SV=1
Length = 434
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 296/423 (69%), Positives = 345/423 (81%), Gaps = 12/423 (2%)
Query: 1 MLHLDRTPSTAGN--KLKPEKFHNHRLR-----SKLAVWSFLFLTVFLFFFLISP----- 48
M HLD PST G + F HR R +KLA WS +F + FF SP
Sbjct: 1 MSHLDDIPSTPGKFKMMDKSPFFLHRTRWQSSVAKLAFWSLVFFGLLFIFFYRSPISNPD 60
Query: 49 SPSATFRRHSSGGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLG 108
S + R +S GGP WEK++ S R R+ G++VLVTGAAGFVG+HVS ALK+RGDGVLG
Sbjct: 61 SSRRSLRTYSWGGPAWEKRVRSSARVRTRNGVSVLVTGAAGFVGTHVSAALKRRGDGVLG 120
Query: 109 LDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVR 168
LDNFN+YY+TSLK++R+ LLER+GVF+++ DIND SLL K+F VV FTHVMHLAAQAGVR
Sbjct: 121 LDNFNDYYDTSLKRSRQALLERSGVFIVEGDINDLSLLKKLFEVVPFTHVMHLAAQAGVR 180
Query: 169 YAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPA 228
YAM+NP SYV SNIAGFVNLLE CKS++PQPAIVWASSSSVYG+N KVPFSEKDRTDQPA
Sbjct: 181 YAMENPGSYVHSNIAGFVNLLEVCKSANPQPAIVWASSSSVYGLNTKVPFSEKDRTDQPA 240
Query: 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVY 288
SLYAATKKAGE IAH YNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFTRDI++GK I+++
Sbjct: 241 SLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTRDILKGKAISIF 300
Query: 289 EAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSR 348
E + +VARDFTYIDDIVKGCL LDTA+KSTGSGGKK+G A+ R+FNLGNT+PVPV+
Sbjct: 301 EGANHGTVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTD 360
Query: 349 LVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYL 408
LVS+LE++LKVKA+ ++ LPRNGDV FTHANIS AQRE GY P+TDL+TGLKKFVRWYL
Sbjct: 361 LVSILERLLKVKAKRNMMKLPRNGDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRWYL 420
Query: 409 SYY 411
YY
Sbjct: 421 GYY 423
>sp|Q9STI6|GAE5_ARATH UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2
SV=1
Length = 436
Score = 598 bits (1542), Expect = e-170, Method: Compositional matrix adjust.
Identities = 310/431 (71%), Positives = 361/431 (83%), Gaps = 18/431 (4%)
Query: 1 MLHLDRTPSTAGNKLKPEK------FHNHR-LR-SKLAVWSFLFLTVFLFFFLISPSPSA 52
M HLD PST G K K +K H+HR LR SKL +W+ LFL +FLF+ ++SP PS
Sbjct: 1 MSHLDDLPSTPG-KYKTDKVPPYGILHHHRYLRLSKLTLWASLFLALFLFYLVLSPPPSP 59
Query: 53 TFRRHSS---------GGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRG 103
+ R + GG WEKQ+ KS RPRS GLTVLVTGA+GFVG+HVS+AL++RG
Sbjct: 60 SRRNLNDSSSISAAKYGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRG 119
Query: 104 DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAA 163
DGVLGLDNFN YY+ LK+AR+GLLER+GVFV++ DIND LL K+F+VV FTHVMHLAA
Sbjct: 120 DGVLGLDNFNRYYDPKLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVLFTHVMHLAA 179
Query: 164 QAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223
QAGVRYAMQNP SYV SNIAGFVNLLE KS++PQPAIVWASSSSVYG+N KVPFSEKDR
Sbjct: 180 QAGVRYAMQNPGSYVNSNIAGFVNLLEVSKSANPQPAIVWASSSSVYGLNSKVPFSEKDR 239
Query: 224 TDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGK 283
TDQPASLYAATKKAGE IAH YNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFT+DI++GK
Sbjct: 240 TDQPASLYAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKGK 299
Query: 284 RITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343
ITV+E+PD SVARDFTYIDDIVKGCL LDTA+KSTGSGGKKKGPA FRI+NLGNT+P
Sbjct: 300 TITVFESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSP 359
Query: 344 VPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKF 403
VPV++LV++LEK+LK+KA+ K++PLPRNGDV+FTHANI+LAQ ELGY P DLETGLKKF
Sbjct: 360 VPVTKLVTILEKLLKMKAKKKIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKF 419
Query: 404 VRWYLSYYNSA 414
V+WY+ +Y +
Sbjct: 420 VKWYMGFYTGS 430
>sp|O22141|GAE4_ARATH UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1
SV=1
Length = 437
Score = 591 bits (1524), Expect = e-168, Method: Compositional matrix adjust.
Identities = 291/438 (66%), Positives = 351/438 (80%), Gaps = 19/438 (4%)
Query: 1 MLHLDRTPSTAGNKLKPEKF-HNHRLRSKLAVWSFLFLTVFLFFFLISPSPSAT------ 53
M LD PS+ G K K EK + HRLR + ++ F F + FL + +
Sbjct: 1 MSRLDDIPSSPG-KFKMEKSSYLHRLRFQSSLTKFAFFSFFLLCLISLLFLRSPPSINPS 59
Query: 54 ---------FRRHSSGGPQWEKQIVKSTRPRST--RGLTVLVTGAAGFVGSHVSLALKKR 102
R ++ GGP WEK++ S R R++ G+TVLVTGAAGFVG+HVS ALK+R
Sbjct: 60 SPSDPSRRSLRTNTYGGPAWEKRLRSSARIRTSTNNGITVLVTGAAGFVGTHVSAALKRR 119
Query: 103 GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLA 162
GDGV+GLDNFN+YY+ SLK+AR+ LLER+G+F+++ DIND LL K+F +V+FTHVMHLA
Sbjct: 120 GDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGDINDVELLRKLFKIVSFTHVMHLA 179
Query: 163 AQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222
AQAGVRYAM+NP+SYV SNIAGFVNLLE CKS +PQPAIVWASSSSVYG+N KVPFSEKD
Sbjct: 180 AQAGVRYAMENPSSYVHSNIAGFVNLLEICKSVNPQPAIVWASSSSVYGLNTKVPFSEKD 239
Query: 223 RTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRG 282
+TDQPASLYAATKKAGE IAH YNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFT+DI++G
Sbjct: 240 KTDQPASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILKG 299
Query: 283 KRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342
K I+++E+ + +VARDFTYIDDIVKGCLA LDTA+KSTGSGGKK+GPA+ R+FNLGNT+
Sbjct: 300 KSISIFESANHGTVARDFTYIDDIVKGCLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTS 359
Query: 343 PVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKK 402
PVPVS LV +LE+ LKVKA+ ++ +PRNGDV FTHANISLAQRELGY PTTDL+TGLKK
Sbjct: 360 PVPVSDLVRILERQLKVKAKKNLIKMPRNGDVPFTHANISLAQRELGYKPTTDLQTGLKK 419
Query: 403 FVRWYLSYYNSASASPSR 420
FVRWYLSYY+ + +R
Sbjct: 420 FVRWYLSYYSGDKKAAAR 437
>sp|Q9LIS3|GAE6_ARATH UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1
SV=1
Length = 460
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 245/352 (69%), Positives = 297/352 (84%)
Query: 60 GGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS 119
GG WEK++ +S+ + GL+VLVTGAAGFVGSH SLAL+KRGDGVLG DNFN+YY+ S
Sbjct: 92 GGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFNDYYDPS 151
Query: 120 LKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVE 179
LK+AR+ LLE+ VF+++ D+ND LL K+F+VV FTH++HLAAQAGVRYAM+NP SY+
Sbjct: 152 LKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVPFTHILHLAAQAGVRYAMKNPQSYIA 211
Query: 180 SNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239
SNIAGFVNLLE K+++PQPAIVWASSSSVYG+N + PFSE+ RTDQPASLYAATKKAGE
Sbjct: 212 SNIAGFVNLLEVAKAANPQPAIVWASSSSVYGLNTENPFSEEHRTDQPASLYAATKKAGE 271
Query: 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299
IAH YNHIYGLS+TGLRFFTVYGPWGRPDMAYFFFT+DI+ GK I +Y D VARD
Sbjct: 272 EIAHTYNHIYGLSLTGLRFFTVYGPWGRPDMAYFFFTKDILHGKSIDIYRTQDNQEVARD 331
Query: 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV 359
FTYIDDIVKGC+ LDTA+KSTGSGGKK+G A+ R++NLGNT+PVPV RLVS+LE +L
Sbjct: 332 FTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSPVPVGRLVSILEGLLGT 391
Query: 360 KAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
KA+ ++ +PRNGDV +THAN+SLA ++ GY PTTDL GL+KFV+WY+ YY
Sbjct: 392 KAKKHLIKMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKFVKWYVGYY 443
>sp|Q9M0B6|GAE1_ARATH UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1
SV=1
Length = 429
Score = 526 bits (1355), Expect = e-148, Method: Compositional matrix adjust.
Identities = 273/412 (66%), Positives = 320/412 (77%), Gaps = 10/412 (2%)
Query: 8 PSTAGNKLKPEKFHNHRLRSKLAVWSFLFLTVFLFFFLISPSPS--------ATFRRHSS 59
PST G K K ++ N +L A S +FL L + S + + S
Sbjct: 10 PSTPG-KFKIDR-SNRQLHRCFASTSTMFLWALFLIALTASYLSFQSFVDSGSRYLTASW 67
Query: 60 GGPQWEKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS 119
GG QWEKQ+ S + + G++VLVTGA GFVGSHVSLAL+KRGDGV+GLDNFNNYY+ S
Sbjct: 68 GGIQWEKQVRTSAQIHRSGGISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPS 127
Query: 120 LKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVE 179
LK+AR+ LL G+FV++ D+ND LL K+F+VVAFTHVMHLAAQAGVRYA++NP SYV
Sbjct: 128 LKRARRSLLSSRGIFVVEGDLNDAKLLAKLFDVVAFTHVMHLAAQAGVRYALENPQSYVH 187
Query: 180 SNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239
SNIAG VNLLE CK+++PQPAIVWASSSSVYG+N+KVPFSE DRTDQPASLYAATKKAGE
Sbjct: 188 SNIAGLVNLLEICKAANPQPAIVWASSSSVYGLNEKVPFSESDRTDQPASLYAATKKAGE 247
Query: 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299
I H YNHIYGL+ITGLRFFTVYGPWGRPDMAYF FTR+I++GK IT+Y + +ARD
Sbjct: 248 EITHTYNHIYGLAITGLRFFTVYGPWGRPDMAYFSFTRNILQGKPITIYRGKNRVDLARD 307
Query: 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV 359
FTYIDDIVKGCL LD++ KSTGSGGKK+G A +RIFNLGNT+PV V LV +LEK LKV
Sbjct: 308 FTYIDDIVKGCLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKV 367
Query: 360 KAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
KA+ + +P NGDV FTHANIS A+ E GY PTTDLETGLKKFVRWYLSYY
Sbjct: 368 KAKRNFVEMPGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRWYLSYY 419
>sp|Q04871|YCL2_ECO11 Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia
coli O111:H- PE=3 SV=1
Length = 334
Score = 286 bits (731), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/337 (43%), Positives = 212/337 (62%), Gaps = 10/337 (2%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ LVTGAAGF+G HVS L + G V+G+DN N+YY+ SLK+AR LL + G D
Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEAGHQVVGIDNLNDYYDVSLKQARLELLAQPGFQFHKID 60
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
+ D+ + +F F V + VRY+++NP++Y +SN+ GF+N+LE C+ + Q
Sbjct: 61 LADREGMTDLFASGHFERVFISPHRLAVRYSLENPHAYADSNLTGFLNILEGCRHNKIQ- 119
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
+++ASSSSVYG+N+K+PFS D D P SLYAATKKA E +AH Y+H+YGL TGLRFF
Sbjct: 120 HLLYASSSSVYGLNRKMPFSTDDSVDHPVSLYAATKKANELMAHTYSHLYGLPATGLRFF 179
Query: 260 TVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT--- 316
TVYGPWGRPDMA F FT+ ++ GK I VY + + RDFTYIDDI + + D
Sbjct: 180 TVYGPWGRPDMALFKFTKAMLEGKSIDVY---NYGKMKRDFTYIDDIAEAIIRLQDVIPH 236
Query: 317 --AKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDV 374
+ + +G A +R++N+GN++PV + + LE L ++A+ +LPL + GDV
Sbjct: 237 ADTQWTVETGTPAASIAPYRVYNIGNSSPVELMDYIQALEDALGIEAKKNMLPL-QPGDV 295
Query: 375 QFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
T A+ +G+ P T ++ G+K FV WY +Y
Sbjct: 296 LETSADTKALYEVIGFTPETTVKDGVKNFVNWYRDFY 332
>sp|Q58455|Y1055_METJA Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1055 PE=3 SV=1
Length = 326
Score = 274 bits (701), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 147/332 (44%), Positives = 211/332 (63%), Gaps = 21/332 (6%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDG--VLGLDNFNNYYETSLKKARKGLLERAGVFV-ID 137
+LVTG+AGF+G H+S L + V+G+DN NNYY LK+ R +L+ + I
Sbjct: 5 NILVTGSAGFIGFHLSKYLMDNYEDLKVIGIDNLNNYYNPVLKEKRNEILKNYENYTFIK 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
D +D L + ++HL AQAGVRY++QNP +Y++SN G +N+ E + D
Sbjct: 65 LDFSDWDDLVENLKDKEIDLIVHLGAQAGVRYSLQNPWAYIKSNEMGTLNIFEFARRFDI 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLR 257
+ +V+ASSSSVYG N+K+PFSE DR D+P SLYA+TK++ E +AH Y+H+YG+ + GLR
Sbjct: 125 EK-VVYASSSSVYGGNRKIPFSEDDRVDKPISLYASTKRSNELMAHVYHHLYGIKMIGLR 183
Query: 258 FFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317
FFTVYG +GRPDMAYF F ++I+ GK I VY ++ RDFTYI D+V G L +
Sbjct: 184 FFTVYGEYGRPDMAYFKFAKNILLGKEIEVYNY---GNMERDFTYISDVVDGILRAI--- 237
Query: 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFT 377
K ++ IFNLGN+ PV + + L+EK L KA+ K LP+ ++GDV T
Sbjct: 238 ----------KKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPM-QDGDVLRT 286
Query: 378 HANISLAQRELGYMPTTDLETGLKKFVRWYLS 409
+A++S +++ LGY P +E GLK+F W+L
Sbjct: 287 YADLSKSEKLLGYKPKVTIEEGLKRFCNWFLE 318
>sp|P39858|CAPI_STAAU Protein CapI OS=Staphylococcus aureus GN=capI PE=3 SV=1
Length = 334
Score = 269 bits (687), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/337 (42%), Positives = 207/337 (61%), Gaps = 10/337 (2%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +L+TG AGF+GSH++ L K+G V+G+D+ N+YY SLK+ R + +
Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVK 60
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
+ + L K+F V++LAAQAGVRY+++NP +Y++SNI GF+N+LE + + Q
Sbjct: 61 LENYDDLSKVFVDEQPEVVVNLAAQAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQ- 119
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
+++ASSSSVYG N PFS D D P SLYAATKK+ E +AH Y+H+Y L TGLRFF
Sbjct: 120 NLIYASSSSVYGANTSKPFSTSDNIDHPLSLYAATKKSNELMAHTYSHLYNLPTTGLRFF 179
Query: 260 TVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC--LAGLDTA 317
TVYGPWGRPDMA F FT+ I+ + I VY + ++ RDFTY+DDIV+ L +
Sbjct: 180 TVYGPWGRPDMALFKFTKAIVNDQAIDVY---NHGNMMRDFTYVDDIVEAISRLVKKPAS 236
Query: 318 KKSTGSGGKKK---GPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDV 374
SG A ++++N+GN +PV + V +E L +A + L + GDV
Sbjct: 237 PNKEWSGADPDPGSSYAPYKVYNIGNNSPVRLMEFVEAIENKLGKEARKNYMDL-QPGDV 295
Query: 375 QFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
T+AN+ R++ + P T ++ G+ KFV WYL YY
Sbjct: 296 PETYANVDDLFRDIDFKPETTIQDGVNKFVDWYLEYY 332
>sp|O54067|LPSL_RHIME UDP-glucuronate 5'-epimerase OS=Rhizobium meliloti (strain 1021)
GN=lspL PE=3 SV=2
Length = 341
Score = 255 bits (651), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 136/342 (39%), Positives = 201/342 (58%), Gaps = 12/342 (3%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVF-VIDADIN 141
L+TG AGF+G HV+ L G V+G D YY+ +LK+ R +L+R+ F + A +
Sbjct: 4 LITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYYDVTLKERRHAILQRSNGFKAVTAMLE 63
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D++ LD+ + ++HLAAQAGVRY+++NP +YV++N+ G N+LE K+ P+ +
Sbjct: 64 DRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAIAPK-HL 122
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTV 261
+ AS+SS+YG N+K+PF+E DR D+P +LYAATKK+ E +AH+Y H+Y + T RFFTV
Sbjct: 123 MLASTSSIYGANEKIPFAEADRADEPMTLYAATKKSMELMAHSYAHLYKVPTTSFRFFTV 182
Query: 262 YGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKST 321
YGPWGRPDMA F F I G+ I +Y ++RDFTYIDD+V+ +
Sbjct: 183 YGPWGRPDMALFKFVDAIHNGRPIDIY---GEGRMSRDFTYIDDLVESIVRLSHVPPSEE 239
Query: 322 GSGGKKKGP------AEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQ 375
+K A FR+ N G PV + V +EK + A +LP+ + GDV
Sbjct: 240 NRVAPEKATDTLSRHAPFRVVNTGGGQPVELMTFVETVEKAVGRPAIHNMLPM-QQGDVP 298
Query: 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSASAS 417
T A+ L + G+ P+ +E G+ +FV WY Y A +
Sbjct: 299 RTFASPDLLEALTGFKPSVSVEEGVARFVEWYDQNYRRAHTT 340
>sp|O34886|YTCB_BACSU Uncharacterized UDP-glucose epimerase YtcB OS=Bacillus subtilis
(strain 168) GN=ytcB PE=3 SV=1
Length = 316
Score = 142 bits (357), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 172/345 (49%), Gaps = 43/345 (12%)
Query: 80 LTVLVTGAAGFVGSHVSLAL-KKRGDGVLGLDNF--NNYYETSLKKARKGLLERAGVFV- 135
+ +LVTGAAGF+GSH+ L K + V+G+D+F + LK + L E+ F+
Sbjct: 1 MKILVTGAAGFIGSHLCEELLKDKKHNVIGIDDFIGPTPFSLKLKNLKNLLPEKRFTFIK 60
Query: 136 ---IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNP-NSYVESNIAGFVNLLET 191
+ AD+ SLL+ + + HLAA GVR + N + Y NI LLE
Sbjct: 61 ENLLTADL--ASLLEGV------DVIFHLAAIPGVRSSWGNHFHPYAAHNIQALQRLLEA 112
Query: 192 CKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGL 251
C+ Q V+AS+SSVYG K+ SE + + P S Y TK GE + H Y +G+
Sbjct: 113 CREHSIQ-TFVFASTSSVYG-EKQGKVSE-NTSLSPLSPYGVTKLTGEKLCHVYKQSFGI 169
Query: 252 SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311
I LRFFTVYGP RPDMA+ + ++ K +T++ DG +RDFTYI D VKG
Sbjct: 170 PIVILRFFTVYGPRQRPDMAFHRLIKQHLQQKPLTIFG--DGQQ-SRDFTYISDCVKGIT 226
Query: 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA----ETKVLP 367
A L GK E N+G V ++VSL+E I KA K+
Sbjct: 227 AVL----------GKPHLIGE--TVNIGGAERASVLKVVSLIEDISGRKATLHFSDKIAG 274
Query: 368 LPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412
P N T A+IS A++ L Y P T L+ GL + + S Y
Sbjct: 275 EPSN-----TWADISKAKQLLHYDPATSLKDGLTNEIAYLSSLYQ 314
>sp|Q57664|GALE_METJA Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0211 PE=3 SV=1
Length = 305
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 152/329 (46%), Gaps = 36/329 (10%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+LVTG AGF+GSH+ L + V+ LDN L K + FV +ADI
Sbjct: 2 ILVTGGAGFIGSHIVDKLIENNYDVIILDN--------LTTGNKNNINPKAEFV-NADIR 52
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
DK L +KI N V+H AAQ VR +++NP + N+ G +N+LE + D +
Sbjct: 53 DKDLDEKI-NFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIV 111
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTV 261
+S +VYG +P E + P S Y +K GE YN +YG+ LR+ V
Sbjct: 112 FASSGGAVYGEPNYLPVDENHPIN-PLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNV 170
Query: 262 YG----PWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317
YG P G + F + +++ + ++ DG RDF Y+ D+ K L L+
Sbjct: 171 YGERQDPKGEAGVISIFIDK-MLKNQSPIIF--GDGNQ-TRDFVYVGDVAKANLMALNWK 226
Query: 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFT 377
+ I N+G V+ L +++ + + E + PR G+V
Sbjct: 227 NE---------------IVNIGTGKETSVNELFDIIKHEIGFRGEA-IYDKPREGEVYRI 270
Query: 378 HANISLAQRELGYMPTTDLETGLKKFVRW 406
+ +I A+ LG+ P DL+ G+K+ V W
Sbjct: 271 YLDIKKAE-SLGWKPEIDLKEGIKRVVNW 298
>sp|Q9KDV3|GALE_BACHD UDP-glucose 4-epimerase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=galE PE=3
SV=1
Length = 334
Score = 122 bits (306), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 161/358 (44%), Gaps = 39/358 (10%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +LVTG AG++GSH L L ++G+ V+ LDN L+K G L + V D
Sbjct: 1 MAILVTGGAGYIGSHTVLFLLEQGEQVIVLDN--------LQKGHAGAL--SDVTFYHGD 50
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D LLD IF + V+H AA + V +++ P Y E+N+ G LL+ D +
Sbjct: 51 IRDDQLLDTIFTTHSIDTVIHFAANSLVGESVKQPIEYYENNVIGTHTLLKKMLEHDVK- 109
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
IV++S+++ YG ++P E D T P + Y TK A E + H YGL LR+F
Sbjct: 110 KIVFSSTAATYGEPVQIPIQESDPT-IPTNPYGETKLAIEKMFHWCQEAYGLQYVCLRYF 168
Query: 260 TVYG--PWGR------PDMAYFFFTRDIIRGKRITV------YEAPDGASVARDFTYIDD 305
G P GR P+ + G+R V Y+ DG+ + RD+ ++ D
Sbjct: 169 NAAGADPNGRIGEDHSPESHLIPIVLQVALGQRERVAIFGDDYQTEDGSCI-RDYIHVMD 227
Query: 306 IVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKV 365
+ + +K SG FNLGN V ++ + ++ ++
Sbjct: 228 LANAHYLACEHLRKDGQSGS----------FNLGNGKGFSVKEVIEVCRQVTGHPIPAEI 277
Query: 366 LPLPRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFVRWYLSYYNSASASPSRKK 422
P R+GD A+ AQ LG+ P LET ++ W+ + + S K+
Sbjct: 278 APR-RSGDPASLIASSEKAQTILGWEPKYPSLETMVEHAWNWHKEHPHGYSTENKDKQ 334
>sp|Q04973|VIPB_SALTI Vi polysaccharide biosynthesis protein VipB/TviC OS=Salmonella
typhi GN=vipB PE=3 SV=1
Length = 348
Score = 122 bits (305), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 169/344 (49%), Gaps = 24/344 (6%)
Query: 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLER--AGVFVIDADI 140
L+TG AGF+GS + L V+GLDNF+ Y+ +L R + E + I DI
Sbjct: 19 LITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDI 78
Query: 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA 200
+ K V + V+H AA V ++++P + +NI GF+N+L + + +
Sbjct: 79 RKFTDCQKACKNVDY--VLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-S 135
Query: 201 IVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFT 260
+A+SSS YG + +P E +R +P S YA TK E A + Y + GLR+F
Sbjct: 136 FTYAASSSTYGDHPDLPKIE-ERIGRPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFN 194
Query: 261 VYGPWGRPDMAYFFFTRDIIRG--KRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318
V+G P+ AY I K +Y DG S +RDF YI+++++ L T
Sbjct: 195 VFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDG-STSRDFCYIENVIQANLLSATTND 253
Query: 319 KSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV--KAETKVLPLP---RNGD 373
++ + +++N+ ++ L L+ L + +++ P+ R+GD
Sbjct: 254 LASKN----------KVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIYKDFRDGD 303
Query: 374 VQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSASAS 417
V+ + A+I+ + L Y P D++ GLK+ ++WY+ +++ +S
Sbjct: 304 VKHSQADITKIKTFLSYEPEFDIKEGLKQTLKWYIDKHSTLYSS 347
>sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2
Length = 348
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 162/346 (46%), Gaps = 35/346 (10%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET--SLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N + SL ++ + + E G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D+ L ++F +F V+H A V ++Q P Y N+ G + LLE K+
Sbjct: 65 MDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK-KAGEAIAHAYNHIYGLSITGL 256
+ +V++SS++VYG + +P E T + Y +K E I + L
Sbjct: 125 K-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLL 183
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITV------YEAPDGASVARDF 300
R+F G P G P+ + ++ I G+R + Y+ DG V RD+
Sbjct: 184 RYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAI-GRREALNVFGNDYDTEDGTGV-RDY 241
Query: 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360
++ D+ KG +A L K+ G RI+NLG T V ++V +EK K
Sbjct: 242 IHVVDLAKGHIAALRKLKEQCGC----------RIYNLGTGTGYSVLQMVQAMEKASGKK 291
Query: 361 AETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV+ R GDV +AN SLAQ ELG+ L+ + RW
Sbjct: 292 IPYKVVA-RREGDVAACYANPSLAQEELGWTAALGLDRMCEDLWRW 336
>sp|Q57301|GALE_YEREN UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3
SV=1
Length = 336
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 161/343 (46%), Gaps = 33/343 (9%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+++L+TG AG++GSH L L ++G V+ LDN N SL + K + + D
Sbjct: 1 MSILITGGAGYIGSHTVLTLLEQGRNVVVLDNLINSSAESLARVSKICGRKPNFY--HGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D+S L IF+ V+H A V +++ P Y ++N+ G + LLE ++ +
Sbjct: 59 ILDRSCLKLIFSSHKIDSVIHFAGLKSVGESVEKPIEYYQNNVVGSITLLEEMCLANVK- 117
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLRF 258
++++SS++VYG + VP +EK R + Y +K E I ++ + SIT LR+
Sbjct: 118 KLIFSSSATVYGEPEFVPLTEKARIGGTTNPYGTSKVMVEQILKDFSLAHPDYSITALRY 177
Query: 259 FTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFTYI 303
F G P G+P+ F T+ I + ++ V Y+ PDG+ + RD+ ++
Sbjct: 178 FNPVGAHPSGLIGEDPNGKPNNLLPFITQVAIGKLSKLLVYGNDYDTPDGSGI-RDYIHV 236
Query: 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363
D+ +G L+ L FRI+NLG V ++ E+I
Sbjct: 237 MDLAEGHLSTLINLTSG------------FRIYNLGTGVGYSVLHMIKEFERITGKNIPF 284
Query: 364 KVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
++ R GD+ A+ LA ELG+ L L+ +W
Sbjct: 285 DIVS-RRPGDIAECWASPELAHLELGWYAKRTLVDMLQDAWKW 326
>sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1
Length = 348
Score = 118 bits (296), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 161/346 (46%), Gaps = 35/346 (10%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET--SLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N + SL ++ + + E G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D+ L ++F +F V+H A V ++Q P Y N+ G + LLE K+
Sbjct: 65 MDILDQGALQRLFKKHSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK-KAGEAIAHAYNHIYGLSITGL 256
+ +V++SS++VYG + +P E T + Y +K E I + L
Sbjct: 125 K-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLL 183
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITV------YEAPDGASVARDF 300
R+F G P G P+ + ++ I G+R + Y+ DG V RD+
Sbjct: 184 RYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAI-GRREALNVFGNDYDTEDGTGV-RDY 241
Query: 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360
++ D+ KG +A L K+ G RI+NLG T V ++V +EK K
Sbjct: 242 IHVVDLAKGHIAALRKLKEQCGC----------RIYNLGTGTGYSVLQMVQAMEKASGKK 291
Query: 361 AETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV+ R GDV +AN SLA ELG+ L+ + RW
Sbjct: 292 IPYKVVA-RREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 336
>sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=2 SV=1
Length = 347
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 162/352 (46%), Gaps = 47/352 (13%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--ETSLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N E S+ ++ + + E G V +
Sbjct: 4 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNAIRGEDSMPESLRRVQELTGRSVEFEE 63
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D++ L +F +F V+H A V ++Q P Y N+ G + LLE ++
Sbjct: 64 MDILDQAALQHLFKKHSFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAHGV 123
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAH-------AYNHIYG 250
+ +V++SS++VYG + +P E T + Y +K E + A+N +
Sbjct: 124 K-NLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCRADTAWNAVL- 181
Query: 251 LSITGLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITV------YEAPDGA 294
LR+F G P G P+ + ++ I G+R + Y DG
Sbjct: 182 -----LRYFNPIGAHASGRIGEDPQGIPNNLMPYVSQVAI-GRREALNVFGDDYATEDGT 235
Query: 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLE 354
V RD+ ++ D+ KG +A L K+ G R +NLG T V ++V +E
Sbjct: 236 GV-RDYIHVVDLAKGHIAALKKLKEQCGC----------RTYNLGTGTGYSVLQMVQAME 284
Query: 355 KILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
K K KV+ R GDV +AN SLA ELG+ L+ + RW
Sbjct: 285 KASGKKIPYKVVA-RREGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1
Length = 347
Score = 112 bits (280), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 164/353 (46%), Gaps = 50/353 (14%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--ETSLKKARKGLLERAG--VFVID 137
VLVTG AG++GSH L L + G + +DNF+N E S+ ++ + + E G V +
Sbjct: 5 VLVTGGAGYIGSHTVLELLEAGYSPVVIDNFHNSIRGEDSMPESLRRVQELTGRSVEFEE 64
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
DI D++ L +F F V+H A V ++Q P Y N+ G + LLE ++
Sbjct: 65 MDILDQAALQHLFKKHNFKAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMRAMGV 124
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL-YAATKKAGEAIAH-------AYNHIY 249
+ ++V++SS++VYG K VP S + + + Y +K E + A+N +
Sbjct: 125 K-SLVFSSSATVYG--KPVPASGRGPPHRGCTKPYGKSKFFIEEMIQDLCRADTAWNAVL 181
Query: 250 GLSITGLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITV------YEAPDG 293
LR+F G P G P+ + ++ I G+R + Y DG
Sbjct: 182 ------LRYFIPIGAHRSARIGEDPQGIPNNLMPYVSQVAI-GRREALNVFGDDYATEDG 234
Query: 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLL 353
V RD+ ++ D+ KG +A L K+ G RI+NLG T V ++V +
Sbjct: 235 TGV-RDYIHVVDLAKGHIAALKKLKEQCGC----------RIYNLGTGTGYSVLQMVQAM 283
Query: 354 EKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
EK K KV+ R GDV +AN SLA ELG+ L+ + RW
Sbjct: 284 EKASGKKIPYKVVAR-REGDVAACYANPSLAHEELGWTAALGLDRMCEDLWRW 335
>sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1
Length = 337
Score = 110 bits (276), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 157/343 (45%), Gaps = 31/343 (9%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+++LVTG AG++GSH L+L +RGD V+ LDN +N S+ + K L + F + D
Sbjct: 1 MSILVTGGAGYIGSHTVLSLLQRGDDVVILDNLSNASRESINRVEK-LTGKTATF-FEGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
+ D+S L +F+ + V+H A V + + P Y ++N+ G + LLE +S+
Sbjct: 59 LLDRSCLRSVFSAHRISAVIHFAGLKAVGASTRKPLEYYQNNVTGTLVLLEEMRSAGVN- 117
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLRF 258
+++SS++VYG + VP+ E S Y +K E I Y LR+
Sbjct: 118 QFIFSSSATVYGADAPVPYVETTPIGGTTSPYGTSKLMVEQILRDYAKANPEFKTIALRY 177
Query: 259 FTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFTYI 303
F G P G P+ + + I R +++ + Y DG V RD+ ++
Sbjct: 178 FNPVGAHESGQMGEDPNGIPNNLLPYIAQVAIGRLEKLGIFGDDYPTEDGTGV-RDYIHV 236
Query: 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363
D+ +G L LD G ++ +NLG V +V EK
Sbjct: 237 MDLAEGHLKALDHLSAIEG----------YKAYNLGAGKGYSVLEMVKAFEKASGGTVAY 286
Query: 364 KVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
++ P R+GD+ A+ +LA +EL + + ++ ++ W
Sbjct: 287 QISP-RRDGDLAAFWADATLADKELNWRVSRGIDEMMRDTWNW 328
>sp|O06485|YFNG_BACSU Putative sugar dehydratase/epimerase YfnG OS=Bacillus subtilis
(strain 168) GN=yfnG PE=3 SV=2
Length = 322
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 153/340 (45%), Gaps = 36/340 (10%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGL--DNF---NNYYETSLKKARKGLLERAGVFV 135
V VTG G +GS++ L ++G V GL D+ N Y +KK +
Sbjct: 8 NVFVTGCTGLLGSYLVKELIEQGANVTGLVRDHVPQSNLYQGEHIKKMN----------I 57
Query: 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
+ + D +++++ V HLAAQA V A +NP S E+NI G N+LE C+
Sbjct: 58 VRGSLEDLAVIERALGEYEIDTVFHLAAQAIVGVANRNPISTFEANILGTWNILEACRKH 117
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITG 255
++ ASS YG + +P+ E + Q Y +K + I+H Y H YGL +
Sbjct: 118 PLIKRVIVASSDKAYGDQENLPYDE-NMPLQGKHPYDVSKSCADLISHTYFHTYGLPVCI 176
Query: 256 LRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVY-EAPD---GASVARDFTYIDDIVKGCL 311
R +YG F R I + ++ + EAP+ + RD+ YI+D V+ L
Sbjct: 177 TRCGNLYGG------GDLNFNRIIPQTIQLVLNGEAPEIRSDGTFVRDYFYIEDAVQAYL 230
Query: 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN 371
+ +++ +G FN N + V LV + K + + KVL N
Sbjct: 231 LLAEKMEENNLAG---------EAFNFSNEIQLTVLELVEKILKKMNSNLKPKVLNQGSN 281
Query: 372 GDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411
+++ + + A++ L + P ++ GL+K + WY ++
Sbjct: 282 -EIKHQYLSAEKARKLLNWTPAYTIDEGLEKTIEWYTEFF 320
>sp|P24325|GALE_HAEIN UDP-glucose 4-epimerase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=galE PE=3 SV=2
Length = 338
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 158/343 (46%), Gaps = 31/343 (9%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +LVTG AG++GSH + L G V+ LDN N SL++ ++ + A + + D
Sbjct: 1 MAILVTGGAGYIGSHTVVELLNVGKEVVVLDNLCNSSPKSLERVKQITGKEAKFY--EGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D++LL KIF V+H A V ++Q P Y +N+AG + L++ K +
Sbjct: 59 ILDRALLQKIFAENEINSVIHFAGLKAVGESVQKPTEYYMNNVAGTLVLIQEMKKAGVW- 117
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLRF 258
V++SS++VYG K +P +E + Y +K E I S+T LR+
Sbjct: 118 NFVFSSSATVYGDPKIIPITEDCEVGGTTNPYGTSKYMVEQILRDTAKAEPKFSMTILRY 177
Query: 259 FTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFTYI 303
F G P G P+ + ++ I + +++V Y+ DG V RD+ ++
Sbjct: 178 FNPVGAHESGLIGEDPNGIPNNLLPYISQVAIGKLAQLSVFGSDYDTHDGTGV-RDYIHV 236
Query: 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363
D+ G L L + G I+NLG V +V EK +
Sbjct: 237 VDLAVGHLKALQRHENDAG----------LHIYNLGTGHGYSVLDMVKAFEKANNITIAY 286
Query: 364 KVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
K++ R+GD+ +++ SLA +ELG++ LE ++ W
Sbjct: 287 KLVE-RRSGDIATCYSDPSLAAKELGWVAERGLEKMMQDTWNW 328
>sp|Q6MWV3|GALE_MYCTU UDP-glucose 4-epimerase OS=Mycobacterium tuberculosis GN=galE1 PE=3
SV=1
Length = 314
Score = 108 bits (271), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 148/331 (44%), Gaps = 26/331 (7%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ LVTGAAGF+GS + L G V+GLDNF T+L+ L + + ++AD
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEH----LADNSAHVFVEAD 56
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I L I V HLAAQ VR ++ +P N+ G V L E + + +
Sbjct: 57 IVTADL-HAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRK 115
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
+ +S S+YG + P E TD PAS YAA K AGE + + H+YGL + +
Sbjct: 116 IVHTSSGGSIYGTPPEYPTPETAPTD-PASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPA 174
Query: 260 TVYGPWGRPD---MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316
VYGP P F + ++ GK V+ D T D V
Sbjct: 175 NVYGPRQDPHGEAGVVAIFAQALLSGKPTRVFG---------DGTNTRDYVFVDDVVDAF 225
Query: 317 AKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQF 376
+ S GG + FN+G +L S + + + + P PR GD++
Sbjct: 226 VRVSADVGGGLR-------FNIGTGKETSDRQLHSAVAAAVGGPDDPEFHP-PRLGDLKR 277
Query: 377 THANISLAQRELGYMPTTDLETGLKKFVRWY 407
+ +I LA+R LG+ P +L G+++ V ++
Sbjct: 278 SCLDIGLAERVLGWRPQIELADGVRRTVEYF 308
>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g23920 PE=2
SV=1
Length = 350
Score = 108 bits (270), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 159/356 (44%), Gaps = 56/356 (15%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI-DAD 139
+VLVTG AG++GSH L L + G + +DN++N SL++ +K E D
Sbjct: 4 SVLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVD 63
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLET-----CKS 194
+ D+ L+KIF+ F V+H A V +++ P Y +NI G V LLE CK+
Sbjct: 64 LRDRPALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNIVGTVTLLEVMAQYGCKN 123
Query: 195 SDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAH-AYNHIYGLSI 253
+V++SS++VYG K+VP +E+ + Y TK E I + I
Sbjct: 124 ------LVFSSSATVYGWPKEVPCTEESPI-SATNPYGRTKLFIEEICRDVHRSDSEWKI 176
Query: 254 TGLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITV----YEAPDGASVA 297
LR+F G P G P+ + + + G+R +TV Y+ DG V
Sbjct: 177 ILLRYFNPVGAHPSGYIGEDPLGVPN-NLMPYVQQVAVGRRPHLTVFGTDYKTKDGTGV- 234
Query: 298 RDFTYIDDIVKGCLAG---LDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLE 354
RD+ ++ D+ G +A LD K S ++NLG V +V+ E
Sbjct: 235 RDYIHVMDLADGHIAALRKLDDLKISC------------EVYNLGTGNGTSVLEMVAAFE 282
Query: 355 KILKVKAETKVLPLP----RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KA K +PL R GD + +A+ A+REL + +E + W
Sbjct: 283 -----KASGKKIPLVMAGRRPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNW 333
>sp|Q45291|GALE_CORGL UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=galE PE=3 SV=2
Length = 329
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 159/332 (47%), Gaps = 39/332 (11%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +LVTG AG+VGS + L + G V +DNF+ ++ A +I+ D
Sbjct: 1 MKLLVTGGAGYVGSVAAAVLLEHGHDVTIIDNFSTGNREAVP---------ADARLIEGD 51
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
+ND +++++ + F V+H AA++ V +++ PN Y N+ + LL+ ++
Sbjct: 52 VND--VVEEVLSEGGFEGVVHFAARSLVGESVEKPNEYWHDNVVTALTLLDAMRAHGVN- 108
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
+V++S+++ YG VP +E D QP + Y ATK + + +Y +GL+ T LR+F
Sbjct: 109 NLVFSSTAATYGEPDVVPITE-DMPTQPTNAYGATKLSIDYAITSYAAAFGLAATSLRYF 167
Query: 260 TVYGPWG------RPDMAYFFFTRDIIRGKRITVY------EAPDGASVARDFTYIDDIV 307
V G +G + + G R + PDG +V RD+ +I D+
Sbjct: 168 NVAGAYGNIGENREVETHLIPLVLQVATGHREKTFMFGDDWPTPDGTAV-RDYIHILDLA 226
Query: 308 KGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP 367
K + L++ + GK RIFNLG+ V ++V + ++ +V P
Sbjct: 227 KAHVLALESNE-----AGKH------RIFNLGSGDGYSVKQVVEMCREVTGHPIPAEVAP 275
Query: 368 LPRNGDVQFTHANISLAQRELGYMPT-TDLET 398
R GD A+ A++ELG+ P TDL T
Sbjct: 276 R-RAGDPATLIASSEKAKQELGWTPEHTDLRT 306
>sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70)
GN=galE PE=3 SV=1
Length = 338
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 157/344 (45%), Gaps = 33/344 (9%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +LVTG AG++GSH + L V+ LDN N SL++ + + V D
Sbjct: 1 MAILVTGGAGYIGSHTVVELLNANKDVVVLDNLCNSSPKSLERVAQ--ITGKQVKFYQGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D +LL KIF V+H A V ++Q P Y +N+ G + L++ K +
Sbjct: 59 ILDTALLQKIFAENQIQSVIHFAGLKAVGESVQKPAEYYMNNVTGSLVLIQEMKKAGVW- 117
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLRF 258
V++SS++VYG + +P +E + + Y +K E I SIT LR+
Sbjct: 118 NFVFSSSATVYGDPEIIPITESCKVGGTTNPYGTSKFMVEQILKDIAKATPEFSITILRY 177
Query: 259 FTVYG----------PWGRPDMAYFFFTRDIIRGK--RITV----YEAPDGASVARDFTY 302
F G P G P+ + ++ I GK +++V YE DG V RD+ +
Sbjct: 178 FNPVGAHESGLIGEDPNGIPNNLLPYISQVAI-GKLPQLSVFGSDYETHDGTGV-RDYIH 235
Query: 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ G L LD + +G A I+NLG + V +V EK+ +K
Sbjct: 236 VVDLAIGHLKALD----------RHEGDAGLHIYNLGTGSGYSVLDMVKAFEKVNDIKIP 285
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
K++ R GD+ +++ SLA+ EL + LE +K W
Sbjct: 286 YKLVDR-RPGDIATCYSDPSLAKTELNWTAARGLEQMMKDTWHW 328
>sp|O64749|ARAE2_ARATH Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana
GN=At2g34850 PE=2 SV=3
Length = 417
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 171/364 (46%), Gaps = 38/364 (10%)
Query: 75 RSTRGLT-VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGV 133
RS G+T VLVTG AG++GSH +L L K V +DN + ++K ++ E +
Sbjct: 64 RSEPGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKILQQLFPEPGKL 123
Query: 134 FVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK 193
I AD+ D + ++KIF+ AF VMH AA A V + Q P Y + + + +LET
Sbjct: 124 QFIYADLGDANAVNKIFSENAFDAVMHFAAVAYVGESTQFPLKYYHNITSNTLVVLETMA 183
Query: 194 SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSI 253
+ + ++++S+ + YG +K+P +E + P + Y KK E I ++ +++
Sbjct: 184 AHGVK-TLIYSSTCATYGEPEKMPITE-ETPQVPINPYGKAKKMAEDIILDFSKNSIMAV 241
Query: 254 TGLRFFTVYG--PWG------RPDM--------AYFFFTRDIIRGKRI--TVYEAPDGAS 295
LR+F V G P G RP++ A F R II G +I T Y+ DG
Sbjct: 242 MILRYFNVIGSDPEGRLGEAPRPELSEHGRISGACFDAARGIIPGLQIKGTDYKTVDGTC 301
Query: 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEK 355
V RD+ + D+V + L+ AK P + IFN+G V V +K
Sbjct: 302 V-RDYIDVTDLVDAHVKALEKAK-----------PRKVGIFNVGTGKGSSVKEFVEACKK 349
Query: 356 ILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFVRW---YLSYY 411
V + L R GD +++ + EL + T+L+ LK RW + S Y
Sbjct: 350 ATGVDIKVDYLER-RAGDYAEVYSDPRKIKEELNWTAKHTNLQESLKMAWRWQKLHRSGY 408
Query: 412 NSAS 415
S+S
Sbjct: 409 GSSS 412
>sp|Q9SA77|ARAE1_ARATH UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1
SV=1
Length = 419
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 183/422 (43%), Gaps = 54/422 (12%)
Query: 5 DRTPSTAGNKLKPEKFHNHRLRSKLAVWSFLFLTVFLFFFLISPSPSATFRRHSSGGPQW 64
+R+ S G K N+ L L S L +F+ + + + F RH G
Sbjct: 14 NRSMSLGGLDYADPKKKNNYLGKILLTASLTALCIFMLKQSPTFNTPSVFSRHEPGVTH- 72
Query: 65 EKQIVKSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKAR 124
VLVTG AG++GSH +L L K V +DN + +++ +
Sbjct: 73 -----------------VLVTGGAGYIGSHAALRLLKESYRVTIVDNLSRGNLAAVRILQ 115
Query: 125 KGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAG 184
+ E + I AD+ D ++KIF AF VMH AA A V + Q P Y + +
Sbjct: 116 ELFPEPGRLQFIYADLGDAKAVNKIFTENAFDAVMHFAAVAYVGESTQFPLKYYHNITSN 175
Query: 185 FVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ-PASLYAATKKAGEAIAH 243
+ +LET + + ++++S+ + YG +P +E+ T Q P + Y KK E I
Sbjct: 176 TLVVLETMAAHGVK-TLIYSSTCATYGEPDIMPITEE--TPQVPINPYGKAKKMAEDIIL 232
Query: 244 AYNHIYGLSITGLRFFTVYG--PWG------RPDM--------AYFFFTRDIIRGKRI-- 285
++ +++ LR+F V G P G RP++ A F R I+ G +I
Sbjct: 233 DFSKNSDMAVMILRYFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIMPGLQIKG 292
Query: 286 TVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345
T Y+ DG V RD+ + D+V + L AK P + I+N+G
Sbjct: 293 TDYKTADGTCV-RDYIDVTDLVDAHVKALQKAK-----------PRKVGIYNVGTGKGSS 340
Query: 346 VSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFV 404
V V +K V+ + LP R GD +++ S ++EL + T+L+ L+
Sbjct: 341 VKEFVEACKKATGVEIKIDYLPR-RAGDYAEVYSDPSKIRKELNWTAKHTNLKESLETAW 399
Query: 405 RW 406
RW
Sbjct: 400 RW 401
>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=At4g10960 PE=2
SV=3
Length = 351
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 155/356 (43%), Gaps = 56/356 (15%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI-DAD 139
VLV+G AG++GSH L L G V+ +DN +N SL++ +K E D
Sbjct: 5 NVLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVD 64
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLET-----CKS 194
+ D+S L+KIF+ F V+H A V +++ P Y +N+ G + LLE CK+
Sbjct: 65 LRDRSALEKIFSETKFDAVIHFAGLKAVGESVEKPLLYYNNNLVGTITLLEVMAQHGCKN 124
Query: 195 SDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYG---- 250
+V++SS++VYG K+VP +E + P S + I +YG
Sbjct: 125 ------LVFSSSATVYGSPKEVPCTE----EFPISALNPYGRTKLFIEEICRDVYGSDPE 174
Query: 251 LSITGLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITV----YEAPDGA 294
I LR+F G P G P+ F + + G+R +TV Y DG
Sbjct: 175 WKIILLRYFNPVGAHPSGDIGEDPRGIPN-NLMPFVQQVAVGRRPHLTVFGNDYNTKDGT 233
Query: 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLE 354
V RD+ ++ D+ G +A L + K G ++NLG V +V E
Sbjct: 234 GV-RDYIHVIDLADGHIAALRKLEDC------KIG---CEVYNLGTGNGTSVLEMVDAFE 283
Query: 355 KILKVKAETKVLPLP----RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KA K +PL R GD + +A+ A+ EL + +E + W
Sbjct: 284 -----KASGKKIPLVIAGRRPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNW 334
>sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 350
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 167/364 (45%), Gaps = 55/364 (15%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID--- 137
TVLVTG AG++GSH L L G + +DN +N ET++ + + E AG F +
Sbjct: 5 TVLVTGGAGYIGSHTVLQLLLGGFKAVVVDNLDNSSETAIHRVK----ELAGKFAGNLSF 60
Query: 138 --ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
D+ D+ L+KIF+ F V+H A V ++Q P Y ++N+ G + L E +
Sbjct: 61 HKLDLRDRDALEKIFSSTKFDSVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLFEVMAAH 120
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAH-AYNHIYGLSIT 254
+ +V++SS++VYG+ K+VP +E+ A+ Y TK E I Y I
Sbjct: 121 GCK-KLVFSSSATVYGLPKEVPCTEEFPL-SAANPYGRTKLIIEEICRDIYRAEQEWKII 178
Query: 255 GLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITV----YEAPDGASVAR 298
LR+F G P G P+ F + + G+R +TV Y DG V R
Sbjct: 179 LLRYFNPVGAHPSGYIGEDPRGIPN-NLMPFVQQVAVGRRPALTVFGNDYTTSDGTGV-R 236
Query: 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILK 358
D+ ++ D+ G +A L K G ++NLG V +V E
Sbjct: 237 DYIHVVDLADGHIAALRKLNDP------KIG---CEVYNLGTGKGTSVLEMVKAFE---- 283
Query: 359 VKAETKVLPLP----RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414
+A K +PL R GD + +A+ + A+REL + + G+ + R +N A
Sbjct: 284 -QASGKKIPLVMAGRRPGDAEVVYASTNKAERELNWKA----KYGIDEMCR---DQWNWA 335
Query: 415 SASP 418
S +P
Sbjct: 336 SKNP 339
>sp|P33119|GALE_CORDI UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC
700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2
Length = 328
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 154/332 (46%), Gaps = 39/332 (11%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +LVTG AG+VGS S L ++G V +DN L + + FV + D
Sbjct: 1 MKLLVTGGAGYVGSVCSTVLLEQGHEVTIVDN--------LTTGNRDAVPLGATFV-EGD 51
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D + D + + +F V+H AA++ V +++ P+ Y + N+ + LL+ K ++ +
Sbjct: 52 IKD--VADNVLSSDSFDAVLHFAARSLVGESVEKPDEYWQHNMVTTLALLDAMKRNNVR- 108
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFF 259
IV++S+++ YG + VP +E D P + Y ATK + + +Y H YG + T LR+F
Sbjct: 109 NIVFSSTAATYGEPETVPITE-DAPTHPTNPYGATKLSIDYAITSYAHAYGFAATSLRYF 167
Query: 260 TVYGPWG------RPDMAYFFFTRDIIRGKRITVY------EAPDGASVARDFTYIDDIV 307
V G +G + + G R ++ DG + RD+ +I D+
Sbjct: 168 NVAGAYGLVGENREIETHLIPLVLQVALGHRDKIFMFGDDWPTEDGTPI-RDYIHIRDLA 226
Query: 308 KGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP 367
+ L + + + RIFNLG+ V +++ ++ +V P
Sbjct: 227 DAHILALQSNVEGS-----------HRIFNLGSGEGYSVKQVIDTCREVTGHLIPAEVAP 275
Query: 368 LPRNGDVQFTHANISLAQRELGYMPT-TDLET 398
R GD A+ + AQ ELG+ P TDL T
Sbjct: 276 R-RAGDPAVLIASSAKAQSELGWKPQRTDLHT 306
>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1
Length = 350
Score = 102 bits (254), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 161/344 (46%), Gaps = 32/344 (9%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL---LERAGVFVIDA 138
+LVTG+AGF+G+H + L G V +DNF+N ++++ R+ + L + F +
Sbjct: 8 ILVTGSAGFIGTHTVVQLLNNGFNVSIIDNFDNSVMEAVERVREVVGSNLSQNLEFTL-G 66
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ +K L+K+F+ F V+H A V +++NP Y ++N+ G +NL E + +
Sbjct: 67 DLRNKDDLEKLFSKSKFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYEVMAKHNCK 126
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLR 257
+V++SS++VYG +K+P E D Q + Y TK E IA I LR
Sbjct: 127 -KMVFSSSATVYGQPEKIPCVE-DFKLQAMNPYGRTKLFLEEIARDIQKAEPEWRIVLLR 184
Query: 258 FFTVYG----------PWGRPDMAYFFFTRDII-RGKRITVY--EAP--DGASVARDFTY 302
+F G P G P+ + + + R + VY + P DG+++ RD+ +
Sbjct: 185 YFNPVGAHESGKLGEDPRGIPNNLMPYIQQVAVGRLPELNVYGHDYPTRDGSAI-RDYIH 243
Query: 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ G +A L S G +NLG V +V+ EK K
Sbjct: 244 VMDLADGHIAALRKLFTSENIG--------CTAYNLGTGRGSSVLEMVAAFEKASGKKIA 295
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
K+ P R GD +A+ + A++ELG+ +E + W
Sbjct: 296 LKLCPR-RPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNW 338
>sp|Q05026|GALE_NEIGO UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1
Length = 338
Score = 100 bits (250), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 157/344 (45%), Gaps = 33/344 (9%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+TVL+TG GF+GSH +++L + G + LDN N L + R+ + + D
Sbjct: 1 MTVLITGGTGFIGSHTAVSLVQSGYDAVILDNLCNSSAAVLPRLRQ--ITGRNIPFYQGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D +L +IF+ V+H A V ++ P Y +N+ G + L E +
Sbjct: 59 IRDCQILRQIFSEHEIESVIHFAGLKAVGESVAEPTKYYGNNVYGSLVLAEEMARAGVL- 117
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE-AIAHAYNHIYGLSITGLRF 258
IV++SS++VYG +KVP++E R A+ Y A+K E + S+ LR+
Sbjct: 118 KIVFSSSATVYGDAEKVPYTEDMRPGDTANPYGASKAMVERMLTDIQKADPRWSVILLRY 177
Query: 259 FTVYG----------PWGRPDMAYFFFTRDIIRGK--RITV----YEAPDGASVARDFTY 302
F G P G P+ + + + G+ +++V Y PDG + RD+ +
Sbjct: 178 FNPIGAHESGLIGEQPNGVPNNLLPYICQ-VASGRLPQLSVFGGDYPTPDGTGM-RDYIH 235
Query: 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ +G +A + K G A +FNLG+ V ++ E +
Sbjct: 236 VMDLAEGHIAAMKA----------KGGVAGVHLFNLGSGRAYSVLEIIRAFEAASGLHIP 285
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
++ P R GD+ ++A+ S +++ G+ L+ ++ RW
Sbjct: 286 YRIQPR-RAGDLACSYADPSHTKQQTGWETKRGLQQMMEDSWRW 328
>sp|Q59745|EXOB_RHILT UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii
GN=exoB PE=3 SV=1
Length = 327
Score = 99.8 bits (247), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 150/347 (43%), Gaps = 46/347 (13%)
Query: 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138
G TVLV G AG++GSH L L +G + DNF+N + + R G E +
Sbjct: 3 GETVLVVGGAGYIGSHTCLDLANKGYRPVVFDNFSNGHREFV---RWGPAE-------EG 52
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
DI D++ LD++ ++H AA V ++++P S+ E+N+ G + LL +++
Sbjct: 53 DIRDRARLDEVLAKHKPAAILHFAALIEVGESVKDPVSFYENNVIGTLTLLSAAQAAGIN 112
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRF 258
A V++S+ + YG+ + VP E R P + Y TK E Y+ L LR+
Sbjct: 113 -AFVFSSTCATYGLPQSVPLDETHRQ-VPINPYGRTKYIVEQALADYDQYGSLRSVVLRY 170
Query: 259 FTV--------YGPWGRPDMAYFFFTRDIIRGKRI------TVYEAPDGASVARDFTYID 304
F G W +P+ D G+R + YE DG V RD+ ++
Sbjct: 171 FNAAGADFEGRIGEWHQPETHAIPLAIDAALGRRQGFKVFGSDYETRDGTCV-RDYIHVL 229
Query: 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETK 364
D+ + ++ K GG NLG T V L+ +E++ +
Sbjct: 230 DLADAHVRAVEYLLK----GGDSVA------LNLGTGTGTTVKELLGAIEEV-----SNR 274
Query: 365 VLPLP----RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWY 407
P+ R GD AN A+ LG++P DL ++ W+
Sbjct: 275 PFPVEYIGRREGDSHTLVANNDKARDVLGWVPQYDLSEIIRSAWDWH 321
>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis thaliana GN=At1g12780 PE=1
SV=2
Length = 351
Score = 99.0 bits (245), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/349 (27%), Positives = 164/349 (46%), Gaps = 40/349 (11%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL---LERAGVFVID 137
+LVTG AGF+G+H + L K G V +DNF+N ++ + R+ + L + F +
Sbjct: 8 NILVTGGAGFIGTHTVVQLLKDGFKVSIIDNFDNSVIEAVDRVRELVGPDLSKKLDFNL- 66
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP 197
D+ +K ++K+F+ F V+H A V +++NP Y ++N+ G +NL ET +
Sbjct: 67 GDLRNKGDIEKLFSKQRFDAVIHFAGLKAVGESVENPRRYFDNNLVGTINLYETMAKYNC 126
Query: 198 QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGL 256
+ +V++SS++VYG +K+P E D + + Y TK E IA I L
Sbjct: 127 K-MMVFSSSATVYGQPEKIPCME-DFELKAMNPYGRTKLFLEEIARDIQKAEPEWRIILL 184
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFT 301
R+F G P G P+ + + + R + V Y DG++V RD+
Sbjct: 185 RYFNPVGAHESGSIGEDPKGIPNNLMPYIQQVAVGRLPELNVYGHDYPTEDGSAV-RDYI 243
Query: 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRI----FNLGNTTPVPVSRLVSLLEKIL 357
++ D+ G +A L +K A+ +I +NLG V +V+ EK
Sbjct: 244 HVMDLADGHIAAL------------RKLFADPKIGCTAYNLGTGQGTSVLEMVAAFEKAS 291
Query: 358 KVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
K K+ P R+GD +A+ A++ELG+ ++ + +W
Sbjct: 292 GKKIPIKLCPR-RSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKW 339
>sp|Q9SUN3|ARAE3_ARATH Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana
GN=At4g20460 PE=2 SV=3
Length = 411
Score = 98.6 bits (244), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 161/353 (45%), Gaps = 37/353 (10%)
Query: 75 RSTRGLT-VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGV 133
RS G+T VLVTG AG++GSH +L L K V +DN + ++K + E +
Sbjct: 64 RSEEGVTHVLVTGGAGYIGSHAALRLLKDSYRVTIVDNLSRGNLGAVKVLQGLFPEPGRL 123
Query: 134 FVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK 193
I AD+ D +DKIF+ AF VMH AA A V + +P Y + + + +LE
Sbjct: 124 QFIYADLGDAKAVDKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAVA 183
Query: 194 SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ-PASLYAATKKAGEAIAHAYNHIYGLS 252
+ ++++S+ + YG K+P E T Q P + Y KK E + ++ ++
Sbjct: 184 RHKVK-KLIYSSTCATYGEPDKMPIVEV--TPQVPINPYGKAKKMAEDMILDFSKNSDMA 240
Query: 253 ITGLRFFTVYG--PWGR------PDM--------AYFFFTRDIIRGKRI--TVYEAPDGA 294
+ LR+F V G P GR P++ A F R +I G ++ T Y+ DG
Sbjct: 241 VMILRYFNVIGSDPEGRLGEAPKPELREHGRISGACFDAARGVIPGLQVKGTDYKTGDGT 300
Query: 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLE 354
V RD+ + D+V + L+ AK P I+N+G V V +
Sbjct: 301 CV-RDYIDVTDLVDAHVKALEKAK-----------PRNVGIYNVGTGKGRSVKEFVEACK 348
Query: 355 KILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFVRW 406
K V + LP R GD +++ + R+L + T+L+ L+ +W
Sbjct: 349 KATGVDIKVDFLPR-RPGDYAEVYSDPAKILRDLNWSARYTNLQESLEVAWKW 400
>sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE
PE=1 SV=1
Length = 338
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 153/348 (43%), Gaps = 41/348 (11%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAG----VFV 135
+ VLVTG +G++GSH + L + G V+ LDN N + L ++ER G FV
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLP-----VIERLGGKHPTFV 55
Query: 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
+ DI +++L+ +I + A V+H A V ++Q P Y ++N+ G + L+ +++
Sbjct: 56 -EGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA 114
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSIT 254
+ + +++SS++VYG K+P+ E T P S Y +K E I SI
Sbjct: 115 NVK-NFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIA 173
Query: 255 GLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITV------YEAPDGASVAR 298
LR+F G P G P+ + + + G+R ++ Y DG V R
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQ-VAVGRRDSLAIFGNDYPTEDGTGV-R 231
Query: 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILK 358
D+ ++ D+ G + ++ G I+NLG V +V+ K
Sbjct: 232 DYIHVMDLADGHVVAMEKLANKPG----------VHIYNLGAGVGNSVLDVVNAFSKACG 281
Query: 359 VKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
P R GD+ A+ S A REL + T L+ + W
Sbjct: 282 KPVNYHFAPR-REGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1
Length = 338
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 152/346 (43%), Gaps = 37/346 (10%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ VLVTG +G++GSH + L + G + LDN N + L AR L + D
Sbjct: 1 MYVLVTGGSGYIGSHTCVQLIEAGYKPVILDNLCNSKSSVL--ARIHSLTGYTPELYAGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D++LLD IF V+H A V ++ P Y +N+ G + LLE +++ +
Sbjct: 59 IRDRTLLDSIFAAHPIHAVIHFAGLKAVGESVNRPLEYYNNNVFGTLVLLEAMRAAQVK- 117
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAI---AHAYNHIYGLSITGL 256
++++SS++VYG ++P+ E T P+S Y +K E I + + ++I L
Sbjct: 118 NLIFSSSATVYGDQPQIPYVESFPTGSPSSPYGRSKLMVEQILQDVQLADPQWNMTI--L 175
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITV------YEAPDGASVARDF 300
R+F G P G P+ F + + G+R ++ Y PDG V RD+
Sbjct: 176 RYFNPVGAHPSGLMGEDPQGIPNNLMPFIAQ-VAVGRRESLAIFGNGYPTPDGTGV-RDY 233
Query: 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360
++ D+ G +A + T G IFNLG V ++V+ K
Sbjct: 234 IHVVDLADGHVAAMKTLHGKPG----------VHIFNLGAGVGHSVLQVVAAFSKACGKP 283
Query: 361 AETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
P R GD+ A+ + A +LG+ + L+ W
Sbjct: 284 LAYHFAPR-REGDLPAYWADATKAAEQLGWRVSRSLDEMAADTWHW 328
>sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=Gale
PE=2 SV=1
Length = 350
Score = 97.8 bits (242), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 153/347 (44%), Gaps = 33/347 (9%)
Query: 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLK--KARKGLLERAG--VFVI 136
TVLVTG AG++GSH L + G V+ +DN N Y + K +A + E G V
Sbjct: 5 TVLVTGGAGYIGSHTVLEMLNAGYNVICVDNLCNAYSSGAKLPEALSRVQEITGKKVNFY 64
Query: 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD 196
DI D+ + +F V H AA V + + P Y +N+ G N+L + +
Sbjct: 65 RVDITDREQVRSVFQEHKIDMVAHFAALKAVGESCRIPLQYYHNNMTG-TNVLLEAMADN 123
Query: 197 PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAI-AHAYNHIYGLSITG 255
V++SS++VYG K +P +E+ T S Y TK E I ++
Sbjct: 124 NVFKFVYSSSATVYGEPKFLPVTEEHPTGNCTSPYGKTKYFTEEILKDLCKSDKRWAVVS 183
Query: 256 LRFFTVYG----------PWGRPDMAYFFFTRDIIRGKR--ITVYEAP----DGASVARD 299
LR+F G P G P+ + + + G+R ++VY + DG V RD
Sbjct: 184 LRYFNPVGAHISGRIGEDPNGEPNNLMPYIAQ-VAVGRRPSLSVYGSDFPTHDGTGV-RD 241
Query: 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV 359
+ +I D+ +G + LD + +G F +NLG V +V EK
Sbjct: 242 YIHIVDLAEGHVKALDKLRNIAETG--------FFAYNLGTGVGYSVLDMVKAFEKASGK 293
Query: 360 KAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
K ++ R+GDV +A+ +LA ++LG+ ++ + RW
Sbjct: 294 KVNYTLVDR-RSGDVATCYADATLADKKLGWKAERGIDKMCEDTWRW 339
>sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=galE PE=3 SV=2
Length = 338
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 41/348 (11%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAG----VFV 135
+ VLVTG +G++GSH + L + G V+ LDN N K++ ++ER G FV
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNS-----KRSVLPVIERLGGKHPTFV 55
Query: 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
+ DI +++L+ +I + A V+H A V ++ P Y ++N+ G + L+ +++
Sbjct: 56 -EGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVARPLEYYDNNVNGTLRLVSAMRAA 114
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSIT 254
+ + ++++SS++VYG K+P+ E T P S Y +K E I SI
Sbjct: 115 NVK-NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIA 173
Query: 255 GLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITV------YEAPDGASVAR 298
LR+F G P G P+ + + + G+R ++ Y DG V R
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQ-VAVGRRESLAVFGNDYPTEDGTGV-R 231
Query: 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILK 358
D+ ++ D+ G + ++ +G I+NLG V +V+ K
Sbjct: 232 DYIHVMDLADGHVVAMEKLADKSG----------VHIYNLGAGVGSSVLDVVNAFSKACG 281
Query: 359 VKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
P R+GD+ A+ S A REL + T L+ + W
Sbjct: 282 KPINYHFAPR-RDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2
Length = 338
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 156/348 (44%), Gaps = 41/348 (11%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAG----VFV 135
+ VLVTG +G++GSH + L + G V+ LDN N K++ ++ER G FV
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNS-----KRSVLPVIERLGGKHPTFV 55
Query: 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS 195
+ DI +++L+ +I + A V+H A V ++ P Y ++N+ G + L+ +++
Sbjct: 56 -EGDIRNEALITEILHDHAIDTVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLVSAMRAA 114
Query: 196 DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSIT 254
+ + ++++SS++VYG K+P+ E T P S Y +K E I SI
Sbjct: 115 NVK-NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPEWSIA 173
Query: 255 GLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITV------YEAPDGASVAR 298
LR+F G P G P+ + + + G+R ++ Y DG V R
Sbjct: 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQ-VAVGRRESLAVFGNDYPTEDGTGV-R 231
Query: 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILK 358
D+ ++ D+ G + ++ +G I+NLG V +V+ K
Sbjct: 232 DYIHVMDLADGHVVAMEKLADKSG----------VHIYNLGAGVGSSVLDVVNAFSKACG 281
Query: 359 VKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
P R+GD+ A+ S A REL + T L+ + W
Sbjct: 282 KPINYHFAPR-RDGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHW 328
>sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1
Length = 354
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 153/350 (43%), Gaps = 30/350 (8%)
Query: 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKAR--KGLLERAG 132
R G T+LVTG AGF+GSH + L K+G V +DN N ++ + R G L +
Sbjct: 5 RMASGETILVTGGAGFIGSHTVVQLLKQGFHVSIIDNLYNSVIDAVHRVRLLVGPLLSSN 64
Query: 133 VFVIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETC 192
+ D+ + LD +F+ F V+H A GV ++ NP++Y ++N+ +NL +
Sbjct: 65 LHFHHGDLRNIHDLDILFSKTKFDAVIHFAGLKGVGESVLNPSNYYDNNLVATINLFQVM 124
Query: 193 KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYG-L 251
+ + ++ +SS++VYG ++P E D + Y +K E +A
Sbjct: 125 SKFNCKKLVI-SSSATVYGQPDQIPCVE-DSNLHAMNPYGRSKLFVEEVARDIQRAEAEW 182
Query: 252 SITGLRFFTVYG----------PWGRPDMAYFFFTR-DIIRGKRITV----YEAPDGASV 296
I LR+F G P G P+ + + + R + + Y DG ++
Sbjct: 183 RIILLRYFNPVGAHESGQIGEDPRGLPNNLMPYIQQVAVARLPELNIYGHDYPTKDGTAI 242
Query: 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKI 356
RD+ ++ D+ G +A L + G +NLG V +V+ EK
Sbjct: 243 -RDYIHVMDLADGHIAALRKLFTTDNIGCTA--------YNLGTGRGTSVLEMVAAFEKA 293
Query: 357 LKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
K K+ P R GD +A+ A++ELG+ +E + +W
Sbjct: 294 SGKKIPIKMCP-RRPGDATAVYASTEKAEKELGWKAKYGVEEMCRDQWKW 342
>sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haemolytica GN=galE PE=3
SV=1
Length = 338
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 151/344 (43%), Gaps = 33/344 (9%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +LVTG AG++GSH + L ++ LDN +N E SL++ ++ + V D
Sbjct: 1 MAILVTGGAGYIGSHTLVELLNENREIVVLDNLSNSSEVSLERVKQ--ITGKSVKFYQGD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
I D+ +L KIF V+H A V +N +++N+ G + L+E ++
Sbjct: 59 ILDRDILRKIFAENQIESVIHFAGLKAVGETSENRYVTIKNNVTGSIVLVEEMLKANVN- 117
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLRF 258
IV++SS++VYG + +P E + Y +K E I + LS LR+
Sbjct: 118 TIVFSSSATVYGDPQIIPIVESCPVGGTTNPYGTSKYMVERILEDTVKAFPQLSAVVLRY 177
Query: 259 FTVYG----------PWGRPDMAYFFFTRDIIRGK--RITV----YEAPDGASVARDFTY 302
F G P G P+ F ++ + GK +++V Y DG V RD+ +
Sbjct: 178 FNRVGAHESGLIGEDPNGIPNNLMPFISQ-VAVGKLPQLSVFGGDYNTHDGTGV-RDYIH 235
Query: 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362
+ D+ G L LD K + A F ++NLG T V +V E +
Sbjct: 236 VVDLALGHLKALD----------KHQNDAGFHVYNLGTGTGYSVLDMVKAFEAANGITIP 285
Query: 363 TKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
KV+ R GD+ ++ A +LG+ LE +K W
Sbjct: 286 YKVVD-RRPGDIAVCYSAPQKALEQLGWETERGLEQMMKDTWNW 328
>sp|A0R5C5|GALE_MYCS2 UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC
700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2
Length = 313
Score = 96.3 bits (238), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 145/332 (43%), Gaps = 28/332 (8%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKG-LLERAGVFVIDA 138
+ LVTGAAGF+GS + L G GV+GLD+ ++ +L A E ++DA
Sbjct: 1 MRTLVTGAAGFIGSTLVDRLLADGHGVVGLDDLSSGRAENLHSAENSDKFEFVKADIVDA 60
Query: 139 DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198
D+ LL + V F HLAAQ V+ ++ +P N+ G V L E + + +
Sbjct: 61 DLT--GLLAEFKPEVIF----HLAAQISVKRSVDDPPFDATVNVVGTVRLAEAARLAGVR 114
Query: 199 PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRF 258
+ +S SVYG P SE D PAS YAA K AGE + Y ++Y L + +
Sbjct: 115 KVVHTSSGGSVYGTPPAYPTSE-DMPVNPASPYAAGKVAGEVYLNMYRNLYDLDCSHIAP 173
Query: 259 FTVYGPWGRPD---MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315
VYGP P F+ ++ G+ ++ DG+ D + AG
Sbjct: 174 ANVYGPRQDPHGEAGVVAIFSEALLAGRTTKIFG--DGSDTRDYVFVDDVVDAFVRAG-- 229
Query: 316 TAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQ 375
GG++ FN+G L + + + E + P PR GD++
Sbjct: 230 ----GPAGGGQR--------FNVGTGVETSTRELHTAIAGAVGAPDEPEFHP-PRLGDLR 276
Query: 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWY 407
+ + + A+ LG+ P L G+ K V ++
Sbjct: 277 RSRLDNTRAREVLGWQPQVALAEGIAKTVEFF 308
>sp|Q9FI17|ARAE4_ARATH Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana
GN=At5g44480 PE=3 SV=1
Length = 436
Score = 95.9 bits (237), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 158/344 (45%), Gaps = 34/344 (9%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
VLVTG AG++GSH +L L + V +DN + ++K ++ + + I AD+
Sbjct: 97 VLVTGGAGYIGSHAALRLLRDSYRVTIVDNLSRGNLGAVKTLQQLFPQTGRLQFIYADLG 156
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D ++KIF+ AF VMH AA A V + P Y + + + +LE + +
Sbjct: 157 DPLAVEKIFSENAFDAVMHFAAVAYVGESTLYPLKYYHNITSNTLGVLEAMARHKVK-KL 215
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTV 261
+++S+ + YG +K+P +E D P + Y KK E + ++ +++ LR+F V
Sbjct: 216 IYSSTCATYGEPEKMPITE-DTPQVPINPYGKAKKMAEDMILDFSKNSDMAVMILRYFNV 274
Query: 262 YG--PWG------RPDM--------AYFFFTRDIIRGKRI--TVYEAPDGASVARDFTYI 303
G P G RP++ A F R I G ++ T Y+ DG + RD+ +
Sbjct: 275 IGSDPGGRLGEAPRPELREQGRISGACFDAARGFIPGLQVKGTDYKTSDGTCI-RDYIDV 333
Query: 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363
D+V + L+ A+ P + I+N+G V V +K V+ +
Sbjct: 334 TDLVDAHVKALEKAQ-----------PRKVGIYNVGTGKGRSVKEFVEACKKATGVEIKV 382
Query: 364 KVLPLPRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFVRW 406
LP R GD +++ + ++L + T+L+ L+ RW
Sbjct: 383 DFLPR-RPGDYAEVYSDPTKILKDLNWTARFTNLQDSLQVAWRW 425
>sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=gal10 PE=3 SV=1
Length = 713
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 154/351 (43%), Gaps = 44/351 (12%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+LVTG AG++GSH + L G V+ +DN N ++ AR + R + D+
Sbjct: 8 ILVTGGAGYIGSHTVIELINHGYKVIIVDNLCNSCYDAV--ARVEFIVRKSIKFFKLDLR 65
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
DK L +IF+ V+H AA V +M+ P Y ++NI G + LL + + +
Sbjct: 66 DKEGLAQIFDTFKIKGVIHFAALKAVGESMKLPLEYYDNNICGTITLLNVMREHRVK-TV 124
Query: 202 VWASSSSVYG----VNKKVPFSEKDRTDQPASLYAATKKAGEAIA---HAYNHIYGLSIT 254
V++SS++VYG + +P E D P + Y TK A E I H ++ + +I
Sbjct: 125 VFSSSATVYGDATRFDNMIPIPESCPND-PTNPYGKTKYAIENIIKDLHTSDNTWRGAI- 182
Query: 255 GLRFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARD 299
LR+F G P G P+ F + I R +++ V Y++ DG + RD
Sbjct: 183 -LRYFNPIGAHPSGLLGEDPLGIPNNLLPFLAQVAIGRREKLLVFGDDYDSHDGTPI-RD 240
Query: 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV 359
+ ++ D+ KG +A L+ K S G +R +NLG V +
Sbjct: 241 YIHVVDLAKGHIAALNYLNKINNSEGM------YREWNLGTGKGSSVFDIYHAF-----C 289
Query: 360 KAETKVLPLP----RNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
K K LP R GDV A+ + A EL + + + +W
Sbjct: 290 KEVGKDLPYEVVGRRTGDVLNLTASPNRANSELKWKAELSITDACRDLWKW 340
>sp|Q8H0B2|ARAE3_ORYSJ Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp.
japonica GN=UEL-3 PE=2 SV=1
Length = 406
Score = 95.1 bits (235), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 173/404 (42%), Gaps = 58/404 (14%)
Query: 31 VWSFLFLTVFLFFFLISPSP----SATFRRHSSGGPQWEKQIVKSTRPRSTRGLTVLVTG 86
V + L LT L F++ SP S+ F RH G VLVTG
Sbjct: 30 VIAALVLTT-LCIFILKQSPGFGGSSVFSRHEPGVTH------------------VLVTG 70
Query: 87 AAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLL 146
AG++GSH SL L K V +DN + ++K ++ + + I AD+ D+ +
Sbjct: 71 GAGYIGSHASLRLLKDNYRVTIVDNLSRGNMGAVKVLQELFPQPGRLQFIYADLGDQKTV 130
Query: 147 DKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206
+KIF AF VMH AA A V + P Y + + + +LE S + ++++S+
Sbjct: 131 NKIFAENAFDAVMHFAAVAYVGESTLEPLRYYHNITSNTLLILEAMASHGVK-TLIYSST 189
Query: 207 SSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNH-IYGLSITGLRFFTVYG-- 263
+ YG +K+P E R P + Y KK E I + +++ LR+F V G
Sbjct: 190 CATYGEPEKMPIVETTR-QLPINPYGKAKKMAEDIILDFTKGRKDMAVMILRYFNVIGSD 248
Query: 264 PWG------RPDM--------AYFFFTRDIIRGKRI--TVYEAPDGASVARDFTYIDDIV 307
P G RP++ A F II G ++ T Y DG + RD+ + D+V
Sbjct: 249 PEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYPTTDGTCI-RDYIDVTDLV 307
Query: 308 KGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP 367
+ L+ A+ P++ I+N+G V V +K V + + L
Sbjct: 308 DAHVKALNKAE-----------PSKVGIYNVGTGRGRSVKEFVDACKKATGVNIKIEYLS 356
Query: 368 LPRNGDVQFTHANISLAQRELGYMPT-TDLETGLKKFVRWYLSY 410
R GD +++ + EL + TDL+ L RW S+
Sbjct: 357 R-RPGDYAEVYSDPTKINTELNWTAQYTDLKESLSVAWRWQKSH 399
>sp|P56986|GALE_NEIMC UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C
GN=galE PE=3 SV=1
Length = 339
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 150/342 (43%), Gaps = 33/342 (9%)
Query: 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141
+LVTG GF+GSH ++L K G V+ LDN N L + + + + DI
Sbjct: 4 ILVTGGTGFIGSHTVVSLLKSGHQVVILDNLCNSSINILPRLKT--ITGQEIPFYQGDIR 61
Query: 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAI 201
D+ +L +IF V+H A V ++ P Y ++N++G + L E + I
Sbjct: 62 DREILRRIFAENRIDSVIHFAGLKAVGESVAEPMKYYDNNVSGSLVLAEEMARAGVF-KI 120
Query: 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYG-LSITGLRFFT 260
V++SS++VYG KVP++E + S Y +K E I S+ LR+F
Sbjct: 121 VFSSSATVYGDPGKVPYTEDMQPGDTTSPYGTSKSMVERILSDIQKADPRWSVILLRYFN 180
Query: 261 VYG----------PWGRPDMAYFFFTRDIIRGK--RITV----YEAPDGASVARDFTYID 304
G P G P+ + + + GK ++ V Y PDG + RD+ ++
Sbjct: 181 PIGAHESGLIGEQPNGIPNNLLPYICQ-VAAGKLPQLAVFGGDYPTPDGTGM-RDYIHVM 238
Query: 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETK 364
D+ +G +A + G+ + NLG+ V ++ E + +
Sbjct: 239 DLAEGHVAAMQAKSNVAGT----------HLLNLGSGRASSVLEIIRAFEAASGLTIPYE 288
Query: 365 VLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRW 406
V P R GD+ +A+ S A+ ++G+ DL ++ RW
Sbjct: 289 VKPR-RAGDLACFYADPSYAKAQIGWQTQRDLTQMMEDSWRW 329
>sp|P44914|RMLB_HAEIN dTDP-glucose 4,6-dehydratase OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=rffG PE=3 SV=1
Length = 338
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 160/359 (44%), Gaps = 44/359 (12%)
Query: 80 LTVLVTGAAGFVGSH-VSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVID- 137
+ +LVTG +GF+GS + + D V+ +D Y + R+ +E +V +
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLT--YAANQSALRE--VENNPRYVFEK 57
Query: 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS-- 195
DI D ++++ IF VMHLAA++ V ++ +V++NI G LLE K+
Sbjct: 58 VDICDLNVIENIFEKYQPDAVMHLAAESHVDRSISGAADFVQTNIVGTYTLLEVAKNYWH 117
Query: 196 --DPQPAIVW----ASSSSVYGVNKKVPFSEKDRTDQ----PASLYAATKKAGEAIAHAY 245
D + S+ VYG + SE T+Q P+S Y+A+K A + A+
Sbjct: 118 TLDEAKKTTFRFHHISTDEVYG---DLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAW 174
Query: 246 NHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305
+ YGL + YG + + + + GK + +Y DG + RD+ +++D
Sbjct: 175 HRTYGLPVIITNSSNNYGAYQHAEKLIPLMISNAVMGKPLPIY--GDGQQI-RDWLFVED 231
Query: 306 IVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKI-------LK 358
V+ L K G G N T V R+ LLE++ +K
Sbjct: 232 HVQASYLVL--TKGRVGENYNIGG-------NCEKTNLEVVKRICQLLEELAPSKPNHIK 282
Query: 359 VKAETKVLPLPRNG-DVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSASA 416
+ R G DV+++ + S ELG+ P E GL++ V+WYL +NS+S+
Sbjct: 283 YYEDLMTFVKDRPGHDVRYS-LDCSKIHAELGWQPQITFEQGLRQTVKWYL--FNSSSS 338
>sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE
PE=3 SV=1
Length = 339
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 160/355 (45%), Gaps = 44/355 (12%)
Query: 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139
+ +LVTG AG++GSH + L G ++ LDN +N +L + ++ + + +AD
Sbjct: 1 MAILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKE--ITGKDLTFYEAD 58
Query: 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP 199
+ D+ +D +F V+H A V ++ P Y +N+ G L E + +
Sbjct: 59 LLDREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYGVK- 117
Query: 200 AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAI---AHAYNHIYGLSITGL 256
IV++SS++VYGV + P +E D + Y TK E I H ++ + +++ L
Sbjct: 118 KIVFSSSATVYGVPETSPITE-DFPLGATNPYGQTKLMLEQILRDLHTADNEWSVAL--L 174
Query: 257 RFFTVYG----------PWGRPDMAYFFFTRDII-RGKRITV----YEAPDGASVARDFT 301
R+F +G P G P+ + + + + ++++V Y DG V RD+
Sbjct: 175 RYFNPFGAHPSGRIGEDPNGIPNNLMPYVAQVAVGKLEQLSVFGNDYPTKDGTGV-RDYI 233
Query: 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA 361
++ D+ +G + L+ STG+ +NLG T V +V EK+
Sbjct: 234 HVVDLAEGHVKALEKVLNSTGADA----------YNLGTGTGYSVLEMVKAFEKV----- 278
Query: 362 ETKVLPL----PRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412
K +P R GD+ A+ + A+RELG+ LE RW S N
Sbjct: 279 SGKEVPYRFADRRPGDIATCFADPAKAKRELGWEAKRGLEEMCADSWRWQSSNVN 333
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,061,762
Number of Sequences: 539616
Number of extensions: 6812469
Number of successful extensions: 17011
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 335
Number of HSP's that attempted gapping in prelim test: 16224
Number of HSP's gapped (non-prelim): 559
length of query: 424
length of database: 191,569,459
effective HSP length: 120
effective length of query: 304
effective length of database: 126,815,539
effective search space: 38551923856
effective search space used: 38551923856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)