Query 042406
Match_columns 424
No_of_seqs 248 out of 2544
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 05:55:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042406.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/042406hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1087 GalE UDP-glucose 4-epi 100.0 6.5E-50 1.4E-54 358.4 32.5 309 80-409 1-323 (329)
2 COG1088 RfbB dTDP-D-glucose 4, 100.0 3.1E-50 6.7E-55 358.5 30.0 311 80-411 1-320 (340)
3 PRK15181 Vi polysaccharide bio 100.0 2.1E-47 4.5E-52 371.1 37.1 319 76-412 12-342 (348)
4 KOG1371 UDP-glucose 4-epimeras 100.0 1.6E-46 3.5E-51 339.9 24.6 319 79-413 2-338 (343)
5 PLN02166 dTDP-glucose 4,6-dehy 100.0 2.4E-44 5.2E-49 356.7 40.9 306 78-414 119-430 (436)
6 PLN02572 UDP-sulfoquinovose sy 100.0 1.1E-44 2.4E-49 360.6 35.7 324 74-413 42-419 (442)
7 PLN02206 UDP-glucuronate decar 100.0 1.3E-43 2.9E-48 351.9 40.9 303 78-411 118-426 (442)
8 TIGR01472 gmd GDP-mannose 4,6- 100.0 2.9E-44 6.3E-49 348.8 35.0 313 80-409 1-341 (343)
9 PRK10217 dTDP-glucose 4,6-dehy 100.0 6.8E-44 1.5E-48 347.9 35.4 313 79-412 1-336 (355)
10 PLN02653 GDP-mannose 4,6-dehyd 100.0 1.1E-43 2.4E-48 344.3 35.3 320 76-413 3-334 (340)
11 PLN02427 UDP-apiose/xylose syn 100.0 8.3E-44 1.8E-48 350.9 33.5 318 76-413 11-374 (386)
12 TIGR02622 CDP_4_6_dhtase CDP-g 100.0 2.3E-43 5.1E-48 343.1 36.1 320 77-413 2-334 (349)
13 PRK11908 NAD-dependent epimera 100.0 7.8E-43 1.7E-47 339.2 35.0 310 79-413 1-341 (347)
14 PRK10084 dTDP-glucose 4,6 dehy 100.0 2.9E-42 6.3E-47 336.0 34.7 313 80-412 1-339 (352)
15 PRK08125 bifunctional UDP-gluc 100.0 2.1E-42 4.6E-47 361.4 35.2 313 77-414 313-656 (660)
16 PLN02240 UDP-glucose 4-epimera 100.0 1.2E-41 2.7E-46 331.6 37.5 326 76-413 2-344 (352)
17 KOG1429 dTDP-glucose 4-6-dehyd 100.0 6.8E-43 1.5E-47 308.6 25.4 309 76-415 24-338 (350)
18 TIGR01181 dTDP_gluc_dehyt dTDP 100.0 7.7E-42 1.7E-46 327.9 34.7 311 81-411 1-314 (317)
19 PLN02695 GDP-D-mannose-3',5'-e 100.0 1.1E-41 2.5E-46 332.8 35.0 307 77-414 19-336 (370)
20 KOG0747 Putative NAD+-dependen 100.0 1.7E-42 3.6E-47 306.5 23.3 311 80-411 7-326 (331)
21 PRK10675 UDP-galactose-4-epime 100.0 7.6E-41 1.6E-45 324.3 35.6 318 80-412 1-334 (338)
22 PLN02989 cinnamyl-alcohol dehy 100.0 9.3E-41 2E-45 321.9 34.0 308 78-410 4-322 (325)
23 PLN02260 probable rhamnose bio 100.0 6E-41 1.3E-45 352.2 35.0 314 78-412 5-324 (668)
24 PLN02214 cinnamoyl-CoA reducta 100.0 3.3E-40 7.3E-45 319.6 35.7 301 77-411 8-320 (342)
25 PRK09987 dTDP-4-dehydrorhamnos 100.0 1E-40 2.2E-45 317.3 31.1 281 80-407 1-293 (299)
26 PLN02725 GDP-4-keto-6-deoxyman 100.0 3.7E-40 8.1E-45 314.9 30.1 291 83-414 1-304 (306)
27 PLN00198 anthocyanidin reducta 100.0 2.5E-39 5.5E-44 313.5 32.6 309 77-410 7-333 (338)
28 PRK11150 rfaD ADP-L-glycero-D- 100.0 1.6E-39 3.5E-44 310.9 29.8 291 82-408 2-307 (308)
29 PLN02896 cinnamyl-alcohol dehy 100.0 2.8E-39 6E-44 315.0 31.9 314 75-413 6-345 (353)
30 PLN02650 dihydroflavonol-4-red 100.0 5.5E-39 1.2E-43 312.7 33.0 309 77-413 3-325 (351)
31 PLN02662 cinnamyl-alcohol dehy 100.0 7.9E-39 1.7E-43 308.0 33.1 302 78-410 3-318 (322)
32 COG0451 WcaG Nucleoside-diphos 100.0 2.2E-38 4.7E-43 303.6 34.8 302 80-411 1-312 (314)
33 PLN02986 cinnamyl-alcohol dehy 100.0 1.6E-38 3.4E-43 305.9 32.9 302 77-410 3-319 (322)
34 TIGR01179 galE UDP-glucose-4-e 100.0 2.2E-38 4.8E-43 305.2 33.9 313 81-410 1-328 (328)
35 TIGR02197 heptose_epim ADP-L-g 100.0 2.9E-38 6.3E-43 302.9 32.8 298 82-408 1-313 (314)
36 TIGR01214 rmlD dTDP-4-dehydror 100.0 2.6E-37 5.5E-42 292.7 31.6 276 81-406 1-286 (287)
37 PF04321 RmlD_sub_bind: RmlD s 100.0 6E-38 1.3E-42 295.5 25.9 280 80-407 1-285 (286)
38 TIGR03466 HpnA hopanoid-associ 100.0 1.1E-36 2.4E-41 293.7 32.5 296 80-410 1-325 (328)
39 KOG1502 Flavonol reductase/cin 100.0 1.7E-36 3.7E-41 279.9 30.6 309 78-411 5-324 (327)
40 COG1091 RfbD dTDP-4-dehydrorha 100.0 4.7E-36 1E-40 273.2 29.7 274 80-406 1-279 (281)
41 TIGR03589 PseB UDP-N-acetylglu 100.0 3.3E-36 7.2E-41 289.4 29.0 276 77-401 2-284 (324)
42 PF01073 3Beta_HSD: 3-beta hyd 100.0 1.4E-36 3E-41 284.7 25.2 261 83-363 1-274 (280)
43 PLN00016 RNA-binding protein; 100.0 7.1E-36 1.5E-40 293.4 29.3 291 77-412 50-355 (378)
44 PLN02686 cinnamoyl-CoA reducta 100.0 1.1E-35 2.3E-40 290.4 27.4 300 75-397 49-363 (367)
45 KOG1430 C-3 sterol dehydrogena 100.0 7.8E-36 1.7E-40 281.1 24.5 316 77-414 2-352 (361)
46 PF01370 Epimerase: NAD depend 100.0 3.2E-35 6.9E-40 270.0 27.2 233 82-339 1-236 (236)
47 COG1089 Gmd GDP-D-mannose dehy 100.0 3.3E-35 7.1E-40 260.2 24.5 317 79-412 2-343 (345)
48 CHL00194 ycf39 Ycf39; Provisio 100.0 3.2E-33 6.9E-38 268.2 27.5 278 80-414 1-306 (317)
49 PLN02778 3,5-epimerase/4-reduc 100.0 4.5E-32 9.8E-37 257.4 30.6 272 78-409 8-293 (298)
50 KOG1431 GDP-L-fucose synthetas 100.0 2.4E-31 5.1E-36 227.8 25.6 294 79-415 1-314 (315)
51 PRK05865 hypothetical protein; 100.0 1.6E-31 3.4E-36 278.9 29.2 256 80-411 1-260 (854)
52 PLN02583 cinnamoyl-CoA reducta 100.0 5.4E-31 1.2E-35 250.4 29.0 280 77-391 4-295 (297)
53 PF02719 Polysacc_synt_2: Poly 100.0 1.1E-31 2.5E-36 245.9 19.2 242 82-360 1-250 (293)
54 COG1086 Predicted nucleoside-d 100.0 2.6E-30 5.7E-35 250.9 27.1 246 76-358 247-496 (588)
55 TIGR01777 yfcH conserved hypot 100.0 7.3E-31 1.6E-35 248.9 22.8 279 82-400 1-292 (292)
56 PLN02996 fatty acyl-CoA reduct 100.0 2.9E-30 6.3E-35 259.9 27.5 266 77-361 9-361 (491)
57 PRK07201 short chain dehydroge 100.0 7.7E-30 1.7E-34 268.6 29.7 303 80-412 1-356 (657)
58 PLN02657 3,8-divinyl protochlo 100.0 9.5E-30 2.1E-34 249.9 27.0 248 74-367 55-306 (390)
59 TIGR01746 Thioester-redct thio 100.0 2.8E-27 6.1E-32 231.3 27.0 259 81-362 1-283 (367)
60 PLN02260 probable rhamnose bio 100.0 2.6E-27 5.6E-32 249.1 28.1 267 78-405 379-659 (668)
61 KOG1372 GDP-mannose 4,6 dehydr 100.0 3E-27 6.4E-32 205.3 21.0 317 78-414 27-373 (376)
62 COG1090 Predicted nucleoside-d 100.0 1.5E-26 3.3E-31 205.8 20.4 284 82-405 1-295 (297)
63 PLN02503 fatty acyl-CoA reduct 99.9 3.4E-25 7.4E-30 224.7 26.0 261 78-359 118-474 (605)
64 PRK06482 short chain dehydroge 99.9 7.3E-25 1.6E-29 206.2 23.8 236 79-359 2-264 (276)
65 PRK12320 hypothetical protein; 99.9 1.1E-24 2.4E-29 223.3 25.7 236 80-398 1-238 (699)
66 PRK13394 3-hydroxybutyrate deh 99.9 1.3E-24 2.9E-29 202.7 22.3 232 76-342 4-259 (262)
67 PRK05875 short chain dehydroge 99.9 3E-24 6.5E-29 202.0 23.9 247 77-358 5-271 (276)
68 PF07993 NAD_binding_4: Male s 99.9 2.6E-25 5.5E-30 205.9 16.2 218 84-310 1-249 (249)
69 PRK12823 benD 1,6-dihydroxycyc 99.9 7.1E-24 1.5E-28 197.7 25.4 226 76-342 5-258 (260)
70 TIGR03649 ergot_EASG ergot alk 99.9 1.4E-24 3.1E-29 205.3 20.3 254 81-404 1-282 (285)
71 PRK07774 short chain dehydroge 99.9 5.5E-24 1.2E-28 197.2 23.8 229 76-345 3-249 (250)
72 PRK09135 pteridine reductase; 99.9 4.8E-24 1E-28 197.3 23.3 232 77-345 4-248 (249)
73 PRK06128 oxidoreductase; Provi 99.9 1E-23 2.2E-28 200.9 25.7 233 76-344 52-299 (300)
74 PRK06194 hypothetical protein; 99.9 1.2E-24 2.5E-29 206.0 19.0 252 76-384 3-277 (287)
75 PRK12825 fabG 3-ketoacyl-(acyl 99.9 1.1E-23 2.4E-28 194.6 25.0 229 77-344 4-248 (249)
76 PRK07523 gluconate 5-dehydroge 99.9 9.1E-24 2E-28 196.4 24.0 232 76-345 7-254 (255)
77 PRK12826 3-ketoacyl-(acyl-carr 99.9 1.2E-23 2.7E-28 194.8 24.1 229 76-342 3-247 (251)
78 PRK07067 sorbitol dehydrogenas 99.9 1.3E-24 2.8E-29 202.4 17.4 234 76-344 3-256 (257)
79 PRK05876 short chain dehydroge 99.9 2E-23 4.2E-28 196.3 25.1 245 76-358 3-263 (275)
80 PRK08263 short chain dehydroge 99.9 1.3E-23 2.9E-28 197.6 23.3 238 78-358 2-263 (275)
81 KOG1201 Hydroxysteroid 17-beta 99.9 1.3E-23 2.7E-28 190.3 22.0 208 73-319 32-258 (300)
82 PRK12429 3-hydroxybutyrate deh 99.9 1.6E-23 3.6E-28 194.8 21.9 230 77-341 2-254 (258)
83 PRK08063 enoyl-(acyl carrier p 99.9 4.8E-23 1E-27 190.9 23.6 229 77-343 2-247 (250)
84 TIGR01963 PHB_DH 3-hydroxybuty 99.9 2.4E-23 5.1E-28 193.4 21.6 232 79-342 1-252 (255)
85 COG4221 Short-chain alcohol de 99.9 5.1E-23 1.1E-27 181.5 22.1 211 76-319 3-231 (246)
86 PRK07074 short chain dehydroge 99.9 8.5E-23 1.8E-27 190.1 24.9 236 79-355 2-254 (257)
87 PRK12746 short chain dehydroge 99.9 9E-23 2E-27 189.5 24.3 229 76-341 3-251 (254)
88 COG0300 DltE Short-chain dehyd 99.9 5.9E-23 1.3E-27 186.5 21.6 210 76-318 3-228 (265)
89 PRK07806 short chain dehydroge 99.9 2.6E-23 5.6E-28 192.5 19.5 233 76-343 3-244 (248)
90 PRK06914 short chain dehydroge 99.9 6.7E-23 1.5E-27 193.3 22.2 231 78-347 2-260 (280)
91 PLN00141 Tic62-NAD(P)-related 99.9 6.2E-23 1.3E-27 190.4 21.3 231 77-355 15-250 (251)
92 PRK12384 sorbitol-6-phosphate 99.9 1.3E-22 2.7E-27 189.2 23.2 237 79-343 2-257 (259)
93 PRK12827 short chain dehydroge 99.9 2.3E-22 5.1E-27 186.0 24.9 226 77-341 4-247 (249)
94 PRK07890 short chain dehydroge 99.9 1.2E-22 2.7E-27 189.0 23.1 229 77-342 3-255 (258)
95 PRK07985 oxidoreductase; Provi 99.9 2E-22 4.2E-27 191.3 24.7 231 76-342 46-291 (294)
96 PRK07231 fabG 3-ketoacyl-(acyl 99.9 2.1E-22 4.5E-27 186.6 24.2 227 77-342 3-248 (251)
97 TIGR03443 alpha_am_amid L-amin 99.9 1.6E-22 3.5E-27 229.6 27.6 262 78-361 970-1266(1389)
98 PRK06138 short chain dehydroge 99.9 2.1E-22 4.6E-27 186.8 23.5 226 77-341 3-248 (252)
99 PRK06077 fabG 3-ketoacyl-(acyl 99.9 2.3E-22 4.9E-27 186.5 23.5 231 76-343 3-246 (252)
100 PRK07478 short chain dehydroge 99.9 3.1E-22 6.8E-27 186.0 24.4 230 76-342 3-249 (254)
101 PRK12829 short chain dehydroge 99.9 2.2E-22 4.9E-27 187.9 23.0 236 76-342 8-261 (264)
102 PRK07775 short chain dehydroge 99.9 5.1E-22 1.1E-26 186.7 25.5 215 77-317 8-240 (274)
103 PLN02253 xanthoxin dehydrogena 99.9 1.7E-22 3.7E-27 190.5 22.3 240 75-348 14-275 (280)
104 PRK06701 short chain dehydroge 99.9 8.3E-22 1.8E-26 186.6 26.9 231 75-342 42-286 (290)
105 COG3320 Putative dehydrogenase 99.9 1.5E-22 3.3E-27 188.8 21.2 261 80-355 1-289 (382)
106 PRK05717 oxidoreductase; Valid 99.9 4.4E-22 9.5E-27 185.1 24.1 228 74-342 5-247 (255)
107 PRK12935 acetoacetyl-CoA reduc 99.9 5.3E-22 1.1E-26 183.6 24.5 226 77-342 4-245 (247)
108 PRK12828 short chain dehydroge 99.9 2.6E-22 5.6E-27 184.5 22.2 218 76-343 4-237 (239)
109 KOG2774 NAD dependent epimeras 99.9 4.6E-23 1E-27 178.1 15.9 305 78-412 43-355 (366)
110 PRK07060 short chain dehydroge 99.9 4.2E-22 9.1E-27 183.9 23.7 225 76-342 6-242 (245)
111 PRK06180 short chain dehydroge 99.9 7.4E-22 1.6E-26 185.9 25.4 216 78-318 3-239 (277)
112 PRK09186 flagellin modificatio 99.9 2.8E-22 6E-27 186.4 22.2 234 77-342 2-254 (256)
113 PRK09134 short chain dehydroge 99.9 4.7E-22 1E-26 185.2 23.7 229 76-346 6-248 (258)
114 PRK06500 short chain dehydroge 99.9 4.5E-22 9.7E-27 184.2 23.1 211 77-318 4-232 (249)
115 PRK05653 fabG 3-ketoacyl-(acyl 99.9 8.9E-22 1.9E-26 181.6 24.1 226 77-342 3-244 (246)
116 TIGR01832 kduD 2-deoxy-D-gluco 99.9 8.5E-22 1.8E-26 182.3 24.0 226 77-341 3-244 (248)
117 PRK12745 3-ketoacyl-(acyl-carr 99.9 6.6E-22 1.4E-26 183.9 23.1 227 80-343 3-252 (256)
118 PLN03209 translocon at the inn 99.9 6.1E-22 1.3E-26 197.5 24.1 240 75-354 76-321 (576)
119 PRK06182 short chain dehydroge 99.9 5.8E-22 1.3E-26 186.2 22.7 210 78-317 2-237 (273)
120 PRK06123 short chain dehydroge 99.9 9.4E-22 2E-26 182.0 23.8 225 79-341 2-247 (248)
121 TIGR03206 benzo_BadH 2-hydroxy 99.9 1.1E-21 2.4E-26 181.6 24.1 226 78-341 2-247 (250)
122 PRK07856 short chain dehydroge 99.9 7.7E-22 1.7E-26 183.2 23.0 224 76-344 3-241 (252)
123 PRK06114 short chain dehydroge 99.9 1.5E-21 3.2E-26 181.5 24.8 230 76-342 5-251 (254)
124 PRK06113 7-alpha-hydroxysteroi 99.9 1.1E-21 2.4E-26 182.4 24.1 230 76-344 8-252 (255)
125 PRK08213 gluconate 5-dehydroge 99.9 1.2E-21 2.5E-26 182.7 23.8 229 77-341 10-255 (259)
126 PRK08339 short chain dehydroge 99.9 1.4E-21 3E-26 182.6 24.2 232 77-345 6-261 (263)
127 PRK06463 fabG 3-ketoacyl-(acyl 99.9 1.5E-21 3.2E-26 181.5 23.9 225 76-342 4-247 (255)
128 PRK12747 short chain dehydroge 99.9 2.2E-21 4.8E-26 180.1 24.9 229 77-342 2-250 (252)
129 PRK08217 fabG 3-ketoacyl-(acyl 99.9 1.9E-21 4.1E-26 180.3 24.5 224 77-342 3-251 (253)
130 PRK09242 tropinone reductase; 99.9 2E-21 4.2E-26 180.9 24.5 230 76-341 6-251 (257)
131 PRK08085 gluconate 5-dehydroge 99.9 1.9E-21 4E-26 180.8 24.1 229 76-342 6-250 (254)
132 PRK12937 short chain dehydroge 99.9 1.9E-21 4.1E-26 179.6 23.7 229 76-341 2-243 (245)
133 KOG2865 NADH:ubiquinone oxidor 99.9 2.8E-22 6E-27 178.0 17.1 291 73-410 55-372 (391)
134 KOG1205 Predicted dehydrogenas 99.9 2.6E-22 5.5E-27 183.7 17.1 176 74-264 7-200 (282)
135 PRK12481 2-deoxy-D-gluconate 3 99.9 1.4E-21 3.1E-26 181.3 22.5 227 76-341 5-247 (251)
136 PRK06124 gluconate 5-dehydroge 99.9 2.8E-21 6.2E-26 179.7 24.5 230 75-342 7-252 (256)
137 PRK06523 short chain dehydroge 99.9 2.1E-21 4.6E-26 181.0 23.7 226 76-345 6-259 (260)
138 PRK12939 short chain dehydroge 99.9 2.5E-21 5.4E-26 179.3 23.9 228 76-342 4-247 (250)
139 PRK08265 short chain dehydroge 99.9 1.1E-21 2.4E-26 183.1 21.7 227 76-342 3-244 (261)
140 PRK07035 short chain dehydroge 99.9 3.1E-21 6.8E-26 179.0 24.4 228 76-341 5-249 (252)
141 PRK06841 short chain dehydroge 99.9 3E-21 6.6E-26 179.4 24.4 225 76-342 12-252 (255)
142 PRK07063 short chain dehydroge 99.9 2E-21 4.3E-26 181.2 23.1 232 76-343 4-255 (260)
143 PRK07814 short chain dehydroge 99.9 2.8E-21 6E-26 180.6 24.1 228 76-341 7-250 (263)
144 PRK05867 short chain dehydroge 99.9 2.7E-21 5.9E-26 179.6 23.9 229 76-342 6-250 (253)
145 PRK06398 aldose dehydrogenase; 99.9 3E-21 6.4E-26 179.9 23.6 221 76-342 3-244 (258)
146 PRK08220 2,3-dihydroxybenzoate 99.9 1.5E-21 3.3E-26 181.0 21.5 228 76-342 5-248 (252)
147 PRK08642 fabG 3-ketoacyl-(acyl 99.9 2.9E-21 6.3E-26 179.2 23.4 226 76-342 2-250 (253)
148 PRK06935 2-deoxy-D-gluconate 3 99.9 3.4E-21 7.4E-26 179.4 23.9 227 76-341 12-254 (258)
149 PF13460 NAD_binding_10: NADH( 99.9 4.2E-22 9.1E-27 175.7 16.8 183 82-316 1-183 (183)
150 PRK08628 short chain dehydroge 99.9 1.8E-21 3.8E-26 181.3 21.8 234 76-348 4-255 (258)
151 PRK08277 D-mannonate oxidoredu 99.9 3.4E-21 7.4E-26 181.5 23.9 228 76-341 7-271 (278)
152 PRK08589 short chain dehydroge 99.9 2.1E-21 4.5E-26 182.3 22.2 231 76-342 3-252 (272)
153 PRK05557 fabG 3-ketoacyl-(acyl 99.9 3.8E-21 8.2E-26 177.6 23.5 226 77-342 3-245 (248)
154 PRK12744 short chain dehydroge 99.9 2.4E-21 5.1E-26 180.4 22.0 235 77-342 6-254 (257)
155 PRK06196 oxidoreductase; Provi 99.9 4.2E-21 9.2E-26 184.1 23.7 225 76-318 23-262 (315)
156 PRK08643 acetoin reductase; Va 99.9 5.9E-21 1.3E-25 177.6 23.6 227 79-342 2-253 (256)
157 PRK06181 short chain dehydroge 99.9 4.3E-21 9.3E-26 179.2 22.8 210 79-317 1-226 (263)
158 PRK07677 short chain dehydroge 99.9 6E-21 1.3E-25 177.2 23.3 227 79-342 1-245 (252)
159 PRK08416 7-alpha-hydroxysteroi 99.9 4.8E-21 1E-25 178.7 22.7 231 75-342 4-257 (260)
160 PRK06172 short chain dehydroge 99.9 7.2E-21 1.6E-25 176.7 23.6 229 76-342 4-250 (253)
161 PRK08324 short chain dehydroge 99.9 2.5E-21 5.3E-26 203.5 22.8 241 74-345 417-678 (681)
162 PRK07453 protochlorophyllide o 99.9 1.6E-21 3.5E-26 187.6 19.3 187 76-265 3-231 (322)
163 PRK07109 short chain dehydroge 99.9 7.2E-21 1.6E-25 183.6 23.7 210 76-318 5-232 (334)
164 PRK12824 acetoacetyl-CoA reduc 99.9 1.2E-20 2.5E-25 174.2 24.0 225 80-343 3-243 (245)
165 PRK12743 oxidoreductase; Provi 99.9 1.2E-20 2.6E-25 175.5 24.1 225 79-342 2-243 (256)
166 PRK08936 glucose-1-dehydrogena 99.9 1.8E-20 3.9E-25 174.9 25.1 230 76-342 4-250 (261)
167 PRK06198 short chain dehydroge 99.9 1.2E-20 2.5E-25 176.0 23.7 230 76-342 3-254 (260)
168 PRK07577 short chain dehydroge 99.9 1.3E-20 2.7E-25 172.9 23.5 215 78-342 2-232 (234)
169 PRK07097 gluconate 5-dehydroge 99.9 1.5E-20 3.2E-25 175.8 24.4 228 76-342 7-257 (265)
170 PRK06079 enoyl-(acyl carrier p 99.9 1.2E-20 2.6E-25 175.1 23.5 226 76-341 4-248 (252)
171 PRK07825 short chain dehydroge 99.9 8.4E-21 1.8E-25 178.3 22.7 199 77-318 3-217 (273)
172 PRK09730 putative NAD(P)-bindi 99.9 1.1E-20 2.3E-25 174.7 22.8 226 79-341 1-246 (247)
173 PRK07041 short chain dehydroge 99.9 7.3E-21 1.6E-25 174.0 21.4 221 83-344 1-229 (230)
174 PRK07024 short chain dehydroge 99.9 4.7E-21 1E-25 178.4 20.4 199 79-318 2-217 (257)
175 PRK05854 short chain dehydroge 99.9 4.8E-21 1E-25 183.4 20.9 189 74-265 9-214 (313)
176 PRK06505 enoyl-(acyl carrier p 99.9 1.7E-20 3.8E-25 175.9 23.9 228 77-342 5-251 (271)
177 PRK08993 2-deoxy-D-gluconate 3 99.9 1.6E-20 3.6E-25 174.4 23.4 227 76-341 7-249 (253)
178 PRK06139 short chain dehydroge 99.9 1.3E-20 2.8E-25 181.1 23.4 211 75-318 3-230 (330)
179 PRK06179 short chain dehydroge 99.9 3E-21 6.5E-26 181.0 18.5 165 78-266 3-183 (270)
180 PRK12742 oxidoreductase; Provi 99.9 3.1E-20 6.8E-25 170.6 24.6 223 76-341 3-234 (237)
181 PRK07062 short chain dehydroge 99.9 2.9E-20 6.4E-25 173.8 24.5 232 76-341 5-260 (265)
182 PRK10538 malonic semialdehyde 99.9 8.4E-21 1.8E-25 175.8 20.6 207 80-318 1-224 (248)
183 PRK05650 short chain dehydroge 99.9 2.5E-20 5.4E-25 174.8 23.9 209 80-317 1-226 (270)
184 PRK12936 3-ketoacyl-(acyl-carr 99.9 2.1E-20 4.6E-25 172.5 23.1 223 76-342 3-242 (245)
185 PRK05872 short chain dehydroge 99.9 1.1E-20 2.3E-25 179.7 21.3 218 75-318 5-236 (296)
186 PRK06603 enoyl-(acyl carrier p 99.9 2.3E-20 5E-25 174.0 23.1 229 76-342 5-252 (260)
187 PRK12938 acetyacetyl-CoA reduc 99.9 3.9E-20 8.5E-25 171.0 24.4 225 77-341 1-242 (246)
188 TIGR01830 3oxo_ACP_reduc 3-oxo 99.9 3E-20 6.5E-25 170.8 23.4 220 82-341 1-237 (239)
189 PRK07984 enoyl-(acyl carrier p 99.9 3.2E-20 7E-25 173.0 23.9 228 77-342 4-251 (262)
190 PRK08415 enoyl-(acyl carrier p 99.9 1.9E-20 4.2E-25 175.7 22.5 228 77-342 3-249 (274)
191 PRK07533 enoyl-(acyl carrier p 99.9 3.3E-20 7.1E-25 172.8 23.8 229 75-341 6-253 (258)
192 PRK06200 2,3-dihydroxy-2,3-dih 99.9 1.1E-20 2.5E-25 176.4 20.6 226 76-341 3-256 (263)
193 PRK08594 enoyl-(acyl carrier p 99.9 3E-20 6.4E-25 173.0 23.3 230 76-341 4-252 (257)
194 PRK06197 short chain dehydroge 99.9 8.4E-21 1.8E-25 181.3 20.1 188 76-266 13-218 (306)
195 PRK07666 fabG 3-ketoacyl-(acyl 99.9 2.7E-20 5.9E-25 171.3 22.8 206 76-318 4-225 (239)
196 PRK05866 short chain dehydroge 99.9 3E-20 6.4E-25 176.2 23.4 206 74-317 35-258 (293)
197 PRK06550 fabG 3-ketoacyl-(acyl 99.9 2.8E-20 6.1E-25 170.7 22.6 217 77-342 3-232 (235)
198 PRK08226 short chain dehydroge 99.9 6.2E-20 1.3E-24 171.4 25.2 229 76-342 3-253 (263)
199 PRK07576 short chain dehydroge 99.9 3.2E-20 6.9E-25 173.5 23.2 231 75-342 5-250 (264)
200 PRK08690 enoyl-(acyl carrier p 99.9 3.5E-20 7.5E-25 172.9 23.4 229 76-342 3-252 (261)
201 PRK12748 3-ketoacyl-(acyl-carr 99.9 5.4E-20 1.2E-24 171.1 24.6 226 77-341 3-253 (256)
202 PRK07792 fabG 3-ketoacyl-(acyl 99.9 4E-20 8.7E-25 176.5 24.3 211 74-317 7-239 (306)
203 PRK05993 short chain dehydroge 99.9 9.9E-21 2.1E-25 178.2 19.6 166 78-265 3-185 (277)
204 PRK06057 short chain dehydroge 99.9 2.9E-20 6.2E-25 172.9 22.4 224 76-341 4-246 (255)
205 PRK06949 short chain dehydroge 99.9 3.3E-20 7.2E-25 172.7 22.8 215 76-318 6-243 (258)
206 PRK07069 short chain dehydroge 99.9 3.8E-20 8.3E-25 171.5 22.7 212 81-318 1-234 (251)
207 TIGR02632 RhaD_aldol-ADH rhamn 99.9 4.5E-20 9.8E-25 193.0 25.8 242 74-343 409-671 (676)
208 PRK06947 glucose-1-dehydrogena 99.9 3.7E-20 8.1E-25 171.3 22.4 225 79-341 2-247 (248)
209 PRK08340 glucose-1-dehydrogena 99.9 4.1E-20 8.9E-25 172.3 22.5 226 80-343 1-254 (259)
210 PRK07904 short chain dehydroge 99.9 5.6E-20 1.2E-24 170.7 23.2 201 78-318 7-224 (253)
211 PRK08264 short chain dehydroge 99.9 2.9E-20 6.3E-25 170.9 21.1 166 76-264 3-182 (238)
212 PRK08251 short chain dehydroge 99.9 5.8E-20 1.3E-24 170.0 22.7 202 79-318 2-219 (248)
213 PRK12859 3-ketoacyl-(acyl-carr 99.9 1.4E-19 3E-24 168.4 25.1 226 76-341 3-254 (256)
214 PRK05565 fabG 3-ketoacyl-(acyl 99.9 6.5E-20 1.4E-24 169.4 22.7 226 77-342 3-245 (247)
215 PRK07454 short chain dehydroge 99.9 4.7E-20 1E-24 169.9 21.7 205 78-318 5-225 (241)
216 PRK07370 enoyl-(acyl carrier p 99.9 4.7E-20 1E-24 171.8 21.8 230 76-342 3-253 (258)
217 PRK06483 dihydromonapterin red 99.9 6.9E-20 1.5E-24 168.3 22.6 216 79-342 2-233 (236)
218 PRK08159 enoyl-(acyl carrier p 99.9 9.6E-20 2.1E-24 170.9 23.8 229 76-342 7-254 (272)
219 PRK07791 short chain dehydroge 99.9 5.1E-20 1.1E-24 174.1 22.0 226 76-343 3-258 (286)
220 PRK06484 short chain dehydroge 99.9 5.1E-20 1.1E-24 188.8 23.8 227 76-342 266-507 (520)
221 PRK07326 short chain dehydroge 99.9 7.7E-20 1.7E-24 168.0 22.6 203 77-319 4-221 (237)
222 PRK07889 enoyl-(acyl carrier p 99.9 1E-19 2.2E-24 169.3 23.2 228 76-341 4-250 (256)
223 PRK07831 short chain dehydroge 99.9 1.4E-19 3E-24 169.0 24.2 229 76-340 14-259 (262)
224 PRK06101 short chain dehydroge 99.9 8.1E-20 1.8E-24 168.3 22.2 196 79-318 1-207 (240)
225 PRK06997 enoyl-(acyl carrier p 99.9 1.3E-19 2.8E-24 168.9 23.8 229 76-342 3-251 (260)
226 KOG1208 Dehydrogenases with di 99.9 3.6E-20 7.9E-25 174.5 20.1 192 75-268 31-236 (314)
227 PRK07102 short chain dehydroge 99.9 8.2E-20 1.8E-24 168.6 22.1 201 79-318 1-214 (243)
228 PRK06171 sorbitol-6-phosphate 99.9 4.4E-20 9.5E-25 172.7 20.5 222 76-341 6-262 (266)
229 PRK08219 short chain dehydroge 99.9 6.9E-20 1.5E-24 167.0 21.2 200 79-318 3-213 (227)
230 TIGR02415 23BDH acetoin reduct 99.9 1.3E-19 2.9E-24 168.2 23.0 218 80-318 1-237 (254)
231 TIGR02685 pter_reduc_Leis pter 99.8 1.6E-19 3.5E-24 169.0 22.4 226 80-344 2-264 (267)
232 PRK08267 short chain dehydroge 99.8 8.9E-20 1.9E-24 170.1 20.5 204 79-317 1-222 (260)
233 PRK08017 oxidoreductase; Provi 99.8 7.7E-20 1.7E-24 170.0 19.8 204 80-318 3-224 (256)
234 PRK08278 short chain dehydroge 99.8 3.6E-19 7.8E-24 167.2 24.2 212 76-318 3-234 (273)
235 PRK08703 short chain dehydroge 99.8 2.5E-19 5.3E-24 165.0 22.5 206 76-318 3-229 (239)
236 TIGR01829 AcAcCoA_reduct aceto 99.8 4.5E-19 9.9E-24 163.3 24.3 223 80-342 1-240 (242)
237 PRK06940 short chain dehydroge 99.8 3E-19 6.5E-24 167.9 23.3 234 79-342 2-263 (275)
238 TIGR03325 BphB_TodD cis-2,3-di 99.8 7.6E-20 1.6E-24 170.8 18.8 227 77-341 3-254 (262)
239 TIGR01831 fabG_rel 3-oxoacyl-( 99.8 5.1E-19 1.1E-23 162.8 23.1 205 82-318 1-224 (239)
240 PRK06125 short chain dehydroge 99.8 6.3E-19 1.4E-23 164.2 24.0 229 77-342 5-253 (259)
241 PRK09291 short chain dehydroge 99.8 4.1E-19 8.9E-24 165.2 20.9 215 79-317 2-229 (257)
242 KOG0725 Reductases with broad 99.8 8.5E-19 1.8E-23 162.8 22.6 238 74-343 3-262 (270)
243 PF05368 NmrA: NmrA-like famil 99.8 7.6E-20 1.6E-24 167.8 15.4 227 82-363 1-231 (233)
244 PRK05884 short chain dehydroge 99.8 3.5E-19 7.7E-24 162.1 19.5 203 80-342 1-218 (223)
245 PRK05693 short chain dehydroge 99.8 3.1E-19 6.8E-24 167.8 19.6 165 79-265 1-180 (274)
246 PRK05855 short chain dehydroge 99.8 3.3E-19 7.1E-24 185.3 21.7 175 75-264 311-501 (582)
247 PRK07832 short chain dehydroge 99.8 8.5E-19 1.8E-23 164.6 22.5 211 80-317 1-232 (272)
248 PLN02780 ketoreductase/ oxidor 99.8 6.7E-19 1.4E-23 168.8 22.0 201 78-315 52-270 (320)
249 PRK09072 short chain dehydroge 99.8 9.3E-19 2E-23 163.5 21.6 206 77-318 3-223 (263)
250 PRK05599 hypothetical protein; 99.8 1.2E-18 2.5E-23 161.2 22.1 199 80-318 1-215 (246)
251 KOG1200 Mitochondrial/plastidi 99.8 2.8E-19 6E-24 150.6 15.8 224 77-341 12-253 (256)
252 PRK06924 short chain dehydroge 99.8 3E-19 6.4E-24 165.6 17.7 209 79-317 1-237 (251)
253 PRK05786 fabG 3-ketoacyl-(acyl 99.8 2.3E-18 5E-23 158.3 22.4 221 77-341 3-234 (238)
254 TIGR01289 LPOR light-dependent 99.8 1.3E-18 2.9E-23 166.6 21.1 223 79-318 3-269 (314)
255 PRK08945 putative oxoacyl-(acy 99.8 2.6E-18 5.7E-23 158.9 22.0 206 76-318 9-233 (247)
256 PLN02730 enoyl-[acyl-carrier-p 99.8 3.2E-18 7E-23 161.8 22.7 232 75-341 5-285 (303)
257 PRK07578 short chain dehydroge 99.8 1.7E-18 3.8E-23 154.7 19.5 182 80-317 1-190 (199)
258 PRK07201 short chain dehydroge 99.8 1.8E-18 3.8E-23 182.5 22.8 203 76-317 368-588 (657)
259 PRK08303 short chain dehydroge 99.8 4.1E-18 9E-23 162.2 22.9 179 75-264 4-211 (305)
260 KOG4169 15-hydroxyprostaglandi 99.8 2.6E-19 5.7E-24 154.8 12.4 226 76-342 2-244 (261)
261 PRK07023 short chain dehydroge 99.8 4.9E-19 1.1E-23 163.4 15.2 165 79-264 1-185 (243)
262 PRK06484 short chain dehydroge 99.8 4.4E-18 9.4E-23 174.6 22.7 171 77-265 3-191 (520)
263 TIGR01500 sepiapter_red sepiap 99.8 2.7E-18 5.9E-23 159.7 19.3 211 81-316 2-243 (256)
264 PRK08862 short chain dehydroge 99.8 5.5E-18 1.2E-22 154.6 19.6 171 76-264 2-190 (227)
265 PRK06953 short chain dehydroge 99.8 4E-18 8.6E-23 155.1 17.5 192 79-318 1-205 (222)
266 PRK08261 fabG 3-ketoacyl-(acyl 99.8 1E-17 2.2E-22 168.7 22.0 226 75-342 206-446 (450)
267 PLN00015 protochlorophyllide r 99.8 1.7E-17 3.7E-22 158.6 20.4 220 83-318 1-265 (308)
268 PRK08177 short chain dehydroge 99.8 6.5E-18 1.4E-22 154.1 15.9 170 79-265 1-184 (225)
269 PRK12367 short chain dehydroge 99.8 2.5E-17 5.4E-22 151.9 19.8 190 76-318 11-213 (245)
270 KOG1221 Acyl-CoA reductase [Li 99.8 1.2E-17 2.6E-22 162.1 18.3 265 77-358 10-332 (467)
271 PRK09009 C factor cell-cell si 99.8 2E-17 4.3E-22 151.8 18.9 196 80-318 1-218 (235)
272 KOG1207 Diacetyl reductase/L-x 99.8 1.4E-18 3.1E-23 143.6 7.6 214 76-319 4-229 (245)
273 KOG1610 Corticosteroid 11-beta 99.8 9.7E-17 2.1E-21 146.2 19.7 167 76-261 26-211 (322)
274 PRK07424 bifunctional sterol d 99.8 1.2E-16 2.5E-21 156.2 21.5 191 76-318 175-373 (406)
275 COG3967 DltE Short-chain dehyd 99.7 5.7E-17 1.2E-21 138.1 15.4 170 76-264 2-188 (245)
276 PRK06300 enoyl-(acyl carrier p 99.7 1.7E-16 3.7E-21 150.0 19.5 232 76-341 5-284 (299)
277 PF13561 adh_short_C2: Enoyl-( 99.7 2E-17 4.4E-22 152.4 12.7 218 86-341 1-239 (241)
278 smart00822 PKS_KR This enzymat 99.7 1.8E-16 4E-21 138.1 17.7 168 80-262 1-179 (180)
279 PF00106 adh_short: short chai 99.7 8E-17 1.7E-21 139.6 15.3 154 80-249 1-166 (167)
280 KOG1210 Predicted 3-ketosphing 99.7 3.5E-16 7.6E-21 142.2 18.1 211 80-318 34-261 (331)
281 COG0702 Predicted nucleoside-d 99.7 1.9E-15 4E-20 141.9 23.7 224 80-363 1-224 (275)
282 COG1028 FabG Dehydrogenases wi 99.7 9.1E-16 2E-20 142.2 19.5 173 76-264 2-192 (251)
283 PRK12428 3-alpha-hydroxysteroi 99.7 8.4E-16 1.8E-20 141.7 16.3 207 95-341 1-229 (241)
284 KOG1611 Predicted short chain- 99.7 3.3E-15 7.1E-20 129.6 15.4 199 79-319 3-233 (249)
285 KOG1209 1-Acyl dihydroxyaceton 99.6 7.8E-16 1.7E-20 131.7 10.2 166 78-263 6-187 (289)
286 COG2910 Putative NADH-flavin r 99.6 6.3E-14 1.4E-18 117.6 18.9 203 80-320 1-203 (211)
287 PF08659 KR: KR domain; Inter 99.6 2.1E-14 4.7E-19 126.1 16.4 165 81-260 2-177 (181)
288 TIGR02813 omega_3_PfaA polyket 99.6 4.3E-14 9.3E-19 163.2 19.1 173 78-264 1996-2223(2582)
289 KOG1014 17 beta-hydroxysteroid 99.6 2.5E-14 5.4E-19 130.6 12.6 172 80-266 50-238 (312)
290 KOG3019 Predicted nucleoside-d 99.6 4.1E-14 8.9E-19 122.2 11.6 272 79-404 12-314 (315)
291 KOG1199 Short-chain alcohol de 99.5 1.8E-14 3.8E-19 119.3 7.9 171 76-264 6-203 (260)
292 KOG1203 Predicted dehydrogenas 99.4 7.8E-12 1.7E-16 120.0 16.6 216 74-319 74-292 (411)
293 PRK06720 hypothetical protein; 99.3 3E-11 6.4E-16 104.5 13.9 88 76-166 13-105 (169)
294 KOG1478 3-keto sterol reductas 99.3 6.1E-11 1.3E-15 104.5 11.9 182 79-264 3-233 (341)
295 KOG4288 Predicted oxidoreducta 99.2 1.3E-10 2.7E-15 101.2 12.5 223 80-355 53-280 (283)
296 KOG1204 Predicted dehydrogenas 99.2 2.6E-11 5.7E-16 105.5 7.0 164 78-265 5-194 (253)
297 COG0623 FabI Enoyl-[acyl-carri 99.2 4.4E-09 9.5E-14 91.9 19.9 229 76-342 3-250 (259)
298 KOG4039 Serine/threonine kinas 99.2 1.1E-10 2.3E-15 97.5 8.5 158 76-266 15-174 (238)
299 PRK13656 trans-2-enoyl-CoA red 99.1 8.1E-09 1.8E-13 98.9 18.9 175 77-264 39-276 (398)
300 PTZ00325 malate dehydrogenase; 99.1 1.2E-09 2.6E-14 103.6 12.1 178 76-267 5-186 (321)
301 PRK08309 short chain dehydroge 99.0 2.6E-09 5.6E-14 93.0 10.4 104 80-206 1-112 (177)
302 PLN00106 malate dehydrogenase 99.0 5.1E-09 1.1E-13 99.5 11.3 176 78-267 17-196 (323)
303 COG1748 LYS9 Saccharopine dehy 98.8 4.1E-08 8.9E-13 94.5 11.3 98 79-205 1-99 (389)
304 PRK09620 hypothetical protein; 98.8 2.1E-08 4.5E-13 90.8 7.9 85 77-168 1-101 (229)
305 PF13950 Epimerase_Csub: UDP-g 98.7 1.9E-08 4.1E-13 70.9 4.8 60 352-412 1-60 (62)
306 cd01336 MDH_cytoplasmic_cytoso 98.7 4.3E-07 9.4E-12 86.9 14.5 174 80-267 3-187 (325)
307 cd01338 MDH_choloroplast_like 98.6 6.5E-07 1.4E-11 85.5 12.9 187 80-285 3-203 (322)
308 PRK06732 phosphopantothenate-- 98.6 4.1E-07 8.8E-12 82.7 9.8 72 83-166 19-93 (229)
309 PRK05579 bifunctional phosphop 98.5 6.1E-07 1.3E-11 87.9 9.2 79 75-167 184-280 (399)
310 PF03435 Saccharop_dh: Sacchar 98.4 9.9E-07 2.2E-11 87.1 10.3 76 82-165 1-78 (386)
311 PRK05086 malate dehydrogenase; 98.4 5.2E-06 1.1E-10 79.1 14.6 172 80-267 1-179 (312)
312 cd01078 NAD_bind_H4MPT_DH NADP 98.4 1.7E-06 3.7E-11 76.8 9.8 83 76-164 25-107 (194)
313 TIGR00715 precor6x_red precorr 98.3 3.5E-06 7.6E-11 77.6 8.9 94 80-198 1-94 (256)
314 TIGR01758 MDH_euk_cyt malate d 98.3 2E-05 4.3E-10 75.4 14.2 160 81-267 1-184 (324)
315 PF00056 Ldh_1_N: lactate/mala 98.3 1.6E-05 3.4E-10 66.6 11.8 115 80-205 1-118 (141)
316 cd00704 MDH Malate dehydrogena 98.3 9.8E-06 2.1E-10 77.5 11.9 162 81-267 2-185 (323)
317 TIGR02114 coaB_strep phosphopa 98.2 3E-06 6.5E-11 76.9 7.3 70 83-167 18-93 (227)
318 PRK12548 shikimate 5-dehydroge 98.2 7E-06 1.5E-10 77.5 9.8 83 76-164 123-209 (289)
319 KOG2733 Uncharacterized membra 98.2 4.9E-06 1.1E-10 77.6 8.4 82 81-165 7-94 (423)
320 PRK00066 ldh L-lactate dehydro 98.0 0.00022 4.7E-09 68.2 15.0 118 77-206 4-123 (315)
321 TIGR00521 coaBC_dfp phosphopan 98.0 2.6E-05 5.6E-10 76.3 8.8 107 76-196 182-313 (390)
322 PRK14982 acyl-ACP reductase; P 97.9 3.3E-05 7.1E-10 73.8 8.4 74 76-166 152-227 (340)
323 PF04127 DFP: DNA / pantothena 97.9 6E-05 1.3E-09 65.9 8.2 76 77-168 1-96 (185)
324 cd05294 LDH-like_MDH_nadp A la 97.8 0.00033 7.1E-09 66.8 13.4 169 80-267 1-179 (309)
325 cd05291 HicDH_like L-2-hydroxy 97.8 0.00049 1.1E-08 65.6 14.3 166 80-267 1-175 (306)
326 cd01337 MDH_glyoxysomal_mitoch 97.8 0.00032 6.8E-09 66.6 12.6 167 80-265 1-176 (310)
327 PRK12475 thiamine/molybdopteri 97.7 0.00051 1.1E-08 66.2 12.9 114 76-212 21-155 (338)
328 TIGR01759 MalateDH-SF1 malate 97.7 0.00074 1.6E-08 64.5 13.3 171 80-267 4-188 (323)
329 PRK07688 thiamine/molybdopteri 97.7 0.00066 1.4E-08 65.4 12.9 114 76-212 21-155 (339)
330 cd05290 LDH_3 A subgroup of L- 97.7 0.0032 6.9E-08 59.8 17.2 166 81-267 1-177 (307)
331 PLN00112 malate dehydrogenase 97.7 0.00084 1.8E-08 66.5 13.5 170 79-267 100-285 (444)
332 KOG1202 Animal-type fatty acid 97.6 0.0002 4.3E-09 76.0 9.1 171 77-261 1766-1947(2376)
333 KOG4022 Dihydropteridine reduc 97.6 0.0027 5.9E-08 52.9 13.5 191 79-316 3-211 (236)
334 PF01488 Shikimate_DH: Shikima 97.6 0.00033 7.2E-09 58.2 8.2 77 76-165 9-86 (135)
335 COG0569 TrkA K+ transport syst 97.5 0.0013 2.8E-08 59.7 11.6 74 80-163 1-75 (225)
336 PRK14106 murD UDP-N-acetylmura 97.5 0.00064 1.4E-08 68.6 10.3 77 77-165 3-79 (450)
337 COG3268 Uncharacterized conser 97.5 0.0004 8.6E-09 64.6 7.7 78 79-166 6-83 (382)
338 COG0039 Mdh Malate/lactate deh 97.5 0.002 4.4E-08 60.6 12.5 168 80-264 1-173 (313)
339 PLN02602 lactate dehydrogenase 97.5 0.0048 1E-07 59.6 15.4 169 80-267 38-212 (350)
340 cd05292 LDH_2 A subgroup of L- 97.5 0.0032 6.9E-08 60.1 14.1 168 80-267 1-174 (308)
341 cd05295 MDH_like Malate dehydr 97.4 0.0039 8.4E-08 61.8 14.7 169 79-267 123-309 (452)
342 cd05293 LDH_1 A subgroup of L- 97.4 0.0043 9.2E-08 59.2 14.5 169 80-267 4-178 (312)
343 TIGR02356 adenyl_thiF thiazole 97.4 0.0025 5.4E-08 56.9 11.9 114 76-212 18-150 (202)
344 COG4982 3-oxoacyl-[acyl-carrie 97.4 0.013 2.7E-07 59.1 17.2 157 78-249 395-584 (866)
345 TIGR01772 MDH_euk_gproteo mala 97.4 0.0016 3.4E-08 62.0 10.6 115 81-206 1-117 (312)
346 PTZ00117 malate dehydrogenase; 97.4 0.0037 8E-08 59.9 13.2 118 78-206 4-123 (319)
347 PF00899 ThiF: ThiF family; I 97.3 0.0034 7.5E-08 52.0 11.4 110 79-211 2-130 (135)
348 TIGR01757 Malate-DH_plant mala 97.3 0.0033 7.2E-08 61.3 12.8 170 79-267 44-229 (387)
349 PRK06223 malate dehydrogenase; 97.3 0.0066 1.4E-07 57.9 14.6 170 79-267 2-177 (307)
350 PRK05442 malate dehydrogenase; 97.3 0.0039 8.5E-08 59.7 12.9 171 78-267 3-189 (326)
351 cd00650 LDH_MDH_like NAD-depen 97.3 0.002 4.4E-08 60.0 10.4 115 82-205 1-119 (263)
352 PLN02968 Probable N-acetyl-gam 97.2 0.0012 2.5E-08 64.6 8.5 104 77-212 36-141 (381)
353 cd00300 LDH_like L-lactate deh 97.2 0.0065 1.4E-07 57.7 13.4 114 82-206 1-116 (300)
354 PLN02819 lysine-ketoglutarate 97.2 0.0029 6.4E-08 68.9 11.4 78 77-164 567-658 (1042)
355 PTZ00082 L-lactate dehydrogena 97.2 0.016 3.4E-07 55.6 15.2 120 77-206 4-129 (321)
356 PRK08328 hypothetical protein; 97.2 0.0078 1.7E-07 54.9 12.5 114 76-212 24-157 (231)
357 cd00757 ThiF_MoeB_HesA_family 97.2 0.0058 1.2E-07 55.6 11.7 113 76-211 18-149 (228)
358 PRK08644 thiamine biosynthesis 97.1 0.01 2.2E-07 53.3 12.6 114 76-212 25-157 (212)
359 TIGR02355 moeB molybdopterin s 97.1 0.01 2.2E-07 54.4 12.7 113 76-211 21-152 (240)
360 PRK13982 bifunctional SbtC-lik 97.1 0.002 4.3E-08 64.3 8.6 80 75-168 252-348 (475)
361 PRK09496 trkA potassium transp 97.1 0.0042 9E-08 62.7 11.1 72 80-162 1-73 (453)
362 PRK14874 aspartate-semialdehyd 97.1 0.0024 5.2E-08 61.7 8.7 70 79-164 1-73 (334)
363 PRK06129 3-hydroxyacyl-CoA deh 97.1 0.0016 3.5E-08 62.1 7.3 37 80-117 3-39 (308)
364 cd01065 NAD_bind_Shikimate_DH 97.0 0.0023 4.9E-08 54.3 7.4 76 77-166 17-93 (155)
365 PF02254 TrkA_N: TrkA-N domain 97.0 0.01 2.2E-07 47.6 10.8 71 82-163 1-71 (116)
366 PF01118 Semialdhyde_dh: Semia 97.0 0.0071 1.5E-07 49.1 9.8 97 81-207 1-99 (121)
367 cd01485 E1-1_like Ubiquitin ac 97.0 0.013 2.8E-07 52.0 12.3 115 76-212 16-152 (198)
368 TIGR01763 MalateDH_bact malate 97.0 0.009 1.9E-07 56.9 11.7 116 80-206 2-119 (305)
369 KOG1494 NAD-dependent malate d 97.0 0.0037 8.1E-08 56.8 8.4 122 76-206 25-146 (345)
370 cd01483 E1_enzyme_family Super 97.0 0.021 4.5E-07 47.8 12.5 108 81-211 1-127 (143)
371 cd01080 NAD_bind_m-THF_DH_Cycl 96.9 0.0034 7.5E-08 54.0 7.5 57 76-164 41-97 (168)
372 cd01487 E1_ThiF_like E1_ThiF_l 96.9 0.018 3.8E-07 50.1 12.0 109 81-212 1-128 (174)
373 PRK15116 sulfur acceptor prote 96.9 0.048 1E-06 50.6 15.3 109 76-206 27-154 (268)
374 PRK05597 molybdopterin biosynt 96.9 0.015 3.3E-07 56.6 12.5 113 76-211 25-156 (355)
375 PRK08762 molybdopterin biosynt 96.9 0.014 3E-07 57.4 12.3 112 76-211 132-263 (376)
376 PRK05690 molybdopterin biosynt 96.9 0.022 4.7E-07 52.4 12.7 113 76-211 29-160 (245)
377 TIGR02354 thiF_fam2 thiamine b 96.9 0.025 5.3E-07 50.3 12.6 82 76-161 18-117 (200)
378 PRK02472 murD UDP-N-acetylmura 96.8 0.0072 1.6E-07 60.9 10.3 78 77-166 3-80 (447)
379 PRK08223 hypothetical protein; 96.8 0.022 4.7E-07 53.2 12.0 113 76-209 24-155 (287)
380 cd01489 Uba2_SUMO Ubiquitin ac 96.8 0.022 4.9E-07 54.0 12.3 110 81-212 1-129 (312)
381 cd01075 NAD_bind_Leu_Phe_Val_D 96.7 0.0014 2.9E-08 58.4 3.7 38 75-113 24-61 (200)
382 PRK08261 fabG 3-ketoacyl-(acyl 96.7 0.023 5E-07 57.3 13.0 120 84-260 43-165 (450)
383 PF02826 2-Hacid_dh_C: D-isome 96.7 0.0087 1.9E-07 52.2 8.7 71 74-164 31-101 (178)
384 cd01492 Aos1_SUMO Ubiquitin ac 96.7 0.025 5.5E-07 50.1 11.6 113 76-212 18-149 (197)
385 cd01339 LDH-like_MDH L-lactate 96.7 0.041 8.9E-07 52.3 13.6 113 82-206 1-116 (300)
386 TIGR01771 L-LDH-NAD L-lactate 96.7 0.029 6.3E-07 53.2 12.5 164 84-267 1-171 (299)
387 PRK00048 dihydrodipicolinate r 96.7 0.031 6.7E-07 51.8 12.4 33 80-112 2-36 (257)
388 PRK14192 bifunctional 5,10-met 96.7 0.0056 1.2E-07 57.4 7.5 36 76-111 156-191 (283)
389 PRK00258 aroE shikimate 5-dehy 96.7 0.0051 1.1E-07 57.8 7.2 40 76-116 120-160 (278)
390 COG0604 Qor NADPH:quinone redu 96.6 0.018 3.8E-07 55.4 10.5 76 79-164 143-221 (326)
391 PF01113 DapB_N: Dihydrodipico 96.6 0.014 3E-07 47.7 8.3 95 80-205 1-98 (124)
392 cd01484 E1-2_like Ubiquitin ac 96.5 0.042 9.1E-07 50.0 12.0 110 81-212 1-130 (234)
393 PRK07878 molybdopterin biosynt 96.5 0.034 7.3E-07 54.9 12.2 114 76-212 39-171 (392)
394 COG1179 Dinucleotide-utilizing 96.5 0.055 1.2E-06 48.6 11.9 116 77-216 28-162 (263)
395 PRK05671 aspartate-semialdehyd 96.5 0.0087 1.9E-07 57.6 7.5 29 78-106 3-31 (336)
396 KOG1198 Zinc-binding oxidoredu 96.5 0.011 2.4E-07 57.2 8.2 80 76-165 155-236 (347)
397 TIGR02853 spore_dpaA dipicolin 96.5 0.013 2.8E-07 55.2 8.5 71 76-163 148-218 (287)
398 TIGR01915 npdG NADPH-dependent 96.5 0.017 3.6E-07 52.2 8.9 37 80-116 1-37 (219)
399 PRK04148 hypothetical protein; 96.4 0.033 7.2E-07 45.7 9.6 89 78-198 16-104 (134)
400 PRK05600 thiamine biosynthesis 96.4 0.042 9.1E-07 53.7 12.1 113 76-211 38-169 (370)
401 TIGR00507 aroE shikimate 5-deh 96.4 0.011 2.5E-07 55.2 7.9 39 77-116 115-153 (270)
402 cd08266 Zn_ADH_like1 Alcohol d 96.4 0.029 6.2E-07 53.8 10.8 77 78-164 166-245 (342)
403 cd08253 zeta_crystallin Zeta-c 96.4 0.041 9E-07 52.1 11.8 77 78-164 144-223 (325)
404 PRK06849 hypothetical protein; 96.4 0.022 4.8E-07 56.3 10.2 77 78-163 3-85 (389)
405 PRK09496 trkA potassium transp 96.4 0.043 9.3E-07 55.4 12.3 77 77-162 229-305 (453)
406 PRK14175 bifunctional 5,10-met 96.4 0.013 2.8E-07 54.7 7.7 58 76-165 155-212 (286)
407 TIGR00518 alaDH alanine dehydr 96.4 0.016 3.5E-07 56.7 8.7 76 77-164 165-240 (370)
408 PRK12549 shikimate 5-dehydroge 96.3 0.0094 2E-07 56.1 6.5 76 76-162 124-200 (284)
409 cd08259 Zn_ADH5 Alcohol dehydr 96.3 0.035 7.7E-07 53.1 10.8 36 78-113 162-197 (332)
410 PF08643 DUF1776: Fungal famil 96.3 0.18 4E-06 47.3 14.8 166 80-262 4-202 (299)
411 TIGR02825 B4_12hDH leukotriene 96.3 0.02 4.3E-07 54.9 8.9 36 78-113 138-173 (325)
412 KOG0023 Alcohol dehydrogenase, 96.3 0.019 4.2E-07 53.5 8.1 101 78-207 181-281 (360)
413 PRK09288 purT phosphoribosylgl 96.3 0.028 6.2E-07 55.6 10.2 74 77-162 10-83 (395)
414 TIGR01296 asd_B aspartate-semi 96.2 0.016 3.5E-07 56.0 7.8 68 81-164 1-71 (339)
415 PRK11199 tyrA bifunctional cho 96.2 0.029 6.2E-07 55.1 9.6 35 78-112 97-131 (374)
416 PRK00436 argC N-acetyl-gamma-g 96.2 0.023 4.9E-07 55.1 8.7 33 79-111 2-35 (343)
417 PRK08306 dipicolinate synthase 96.2 0.026 5.7E-07 53.5 8.8 70 76-162 149-218 (296)
418 TIGR01850 argC N-acetyl-gamma- 96.1 0.022 4.8E-07 55.2 8.4 101 80-210 1-104 (346)
419 PF00070 Pyr_redox: Pyridine n 96.1 0.032 7E-07 41.4 7.5 33 81-114 1-33 (80)
420 cd00755 YgdL_like Family of ac 96.1 0.088 1.9E-06 47.8 11.6 106 77-204 9-133 (231)
421 PRK07411 hypothetical protein; 96.1 0.069 1.5E-06 52.7 11.8 113 76-211 35-166 (390)
422 COG2085 Predicted dinucleotide 96.1 0.018 3.8E-07 50.8 6.7 37 82-118 3-39 (211)
423 PRK12749 quinate/shikimate deh 96.1 0.042 9E-07 51.8 9.6 38 76-114 121-159 (288)
424 PF02882 THF_DHG_CYH_C: Tetrah 96.1 0.021 4.6E-07 48.5 6.9 36 76-111 33-68 (160)
425 PRK07066 3-hydroxybutyryl-CoA 96.1 0.041 8.8E-07 52.6 9.6 38 79-117 7-44 (321)
426 cd08295 double_bond_reductase_ 96.0 0.078 1.7E-06 51.2 11.8 37 77-113 150-186 (338)
427 PRK03659 glutathione-regulated 96.0 0.043 9.3E-07 57.4 10.5 72 79-162 400-472 (601)
428 PRK14194 bifunctional 5,10-met 96.0 0.021 4.4E-07 53.7 7.3 57 76-164 156-212 (301)
429 PRK13940 glutamyl-tRNA reducta 96.0 0.022 4.7E-07 56.5 7.8 76 76-166 178-254 (414)
430 PRK10669 putative cation:proto 96.0 0.043 9.3E-07 57.0 10.4 71 80-161 418-488 (558)
431 TIGR01470 cysG_Nterm siroheme 96.0 0.063 1.4E-06 47.9 9.8 72 76-162 6-77 (205)
432 PLN02520 bifunctional 3-dehydr 96.0 0.017 3.8E-07 59.2 7.0 38 76-114 376-413 (529)
433 PRK06019 phosphoribosylaminoim 95.9 0.025 5.4E-07 55.5 7.8 67 79-159 2-68 (372)
434 PF03721 UDPG_MGDP_dh_N: UDP-g 95.9 0.053 1.1E-06 47.6 9.0 34 80-114 1-34 (185)
435 PF03446 NAD_binding_2: NAD bi 95.9 0.04 8.7E-07 47.2 8.1 65 79-162 1-65 (163)
436 COG0027 PurT Formate-dependent 95.9 0.024 5.2E-07 52.5 6.9 72 78-161 11-82 (394)
437 PRK07877 hypothetical protein; 95.9 0.076 1.7E-06 56.2 11.6 107 76-206 104-229 (722)
438 PRK14852 hypothetical protein; 95.9 0.11 2.4E-06 56.2 12.8 113 76-209 329-460 (989)
439 PRK08664 aspartate-semialdehyd 95.9 0.044 9.6E-07 53.2 9.2 35 79-113 3-38 (349)
440 cd05212 NAD_bind_m-THF_DH_Cycl 95.8 0.033 7.1E-07 46.3 6.8 58 76-165 25-82 (140)
441 TIGR01809 Shik-DH-AROM shikima 95.8 0.035 7.5E-07 52.2 7.7 77 77-164 123-200 (282)
442 PRK15469 ghrA bifunctional gly 95.7 0.093 2E-06 50.1 10.5 68 76-164 133-200 (312)
443 PRK14851 hypothetical protein; 95.7 0.18 4E-06 53.1 13.5 109 76-205 40-167 (679)
444 COG0026 PurK Phosphoribosylami 95.7 0.041 8.9E-07 52.5 7.8 67 79-159 1-67 (375)
445 PRK13243 glyoxylate reductase; 95.7 0.071 1.5E-06 51.4 9.6 69 75-164 146-214 (333)
446 COG1064 AdhP Zn-dependent alco 95.7 0.12 2.5E-06 49.5 10.7 74 77-163 165-238 (339)
447 cd08294 leukotriene_B4_DH_like 95.7 0.11 2.3E-06 49.8 10.8 36 78-113 143-178 (329)
448 PLN02383 aspartate semialdehyd 95.6 0.023 5E-07 54.9 6.0 28 78-105 6-33 (344)
449 cd01079 NAD_bind_m-THF_DH NAD 95.6 0.046 1E-06 47.7 7.3 79 76-166 59-138 (197)
450 cd01491 Ube1_repeat1 Ubiquitin 95.6 0.17 3.8E-06 47.4 11.6 110 76-212 16-144 (286)
451 PRK09260 3-hydroxybutyryl-CoA 95.6 0.038 8.3E-07 52.2 7.4 38 80-118 2-39 (288)
452 PRK14619 NAD(P)H-dependent gly 95.6 0.064 1.4E-06 51.2 8.9 35 78-113 3-37 (308)
453 PRK08655 prephenate dehydrogen 95.6 0.029 6.4E-07 56.2 6.9 35 80-114 1-35 (437)
454 TIGR01035 hemA glutamyl-tRNA r 95.6 0.039 8.5E-07 55.0 7.7 73 76-164 177-250 (417)
455 PF00670 AdoHcyase_NAD: S-aden 95.6 0.059 1.3E-06 45.7 7.6 71 76-166 20-90 (162)
456 PRK14027 quinate/shikimate deh 95.6 0.068 1.5E-06 50.2 8.8 41 77-118 125-166 (283)
457 PLN02928 oxidoreductase family 95.6 0.057 1.2E-06 52.4 8.5 82 75-164 155-236 (347)
458 TIGR01142 purT phosphoribosylg 95.5 0.04 8.7E-07 54.2 7.6 71 81-163 1-71 (380)
459 TIGR03366 HpnZ_proposed putati 95.5 0.1 2.3E-06 48.9 10.1 76 78-164 120-197 (280)
460 PRK10792 bifunctional 5,10-met 95.5 0.039 8.5E-07 51.4 6.9 58 76-165 156-213 (285)
461 PRK00045 hemA glutamyl-tRNA re 95.5 0.042 9.1E-07 54.9 7.6 73 77-165 180-253 (423)
462 PRK06718 precorrin-2 dehydroge 95.5 0.058 1.3E-06 48.0 7.7 36 76-112 7-42 (202)
463 KOG2013 SMT3/SUMO-activating c 95.5 0.041 8.9E-07 53.8 6.9 35 78-113 11-46 (603)
464 cd05213 NAD_bind_Glutamyl_tRNA 95.4 0.048 1.1E-06 52.1 7.5 72 77-164 176-248 (311)
465 PRK08293 3-hydroxybutyryl-CoA 95.4 0.1 2.3E-06 49.2 9.5 39 79-118 3-41 (287)
466 PRK14188 bifunctional 5,10-met 95.4 0.059 1.3E-06 50.7 7.6 35 76-110 155-189 (296)
467 COG0169 AroE Shikimate 5-dehyd 95.4 0.051 1.1E-06 50.8 7.1 43 76-119 123-166 (283)
468 PRK07819 3-hydroxybutyryl-CoA 95.4 0.053 1.2E-06 51.1 7.4 41 79-120 5-45 (286)
469 PRK07574 formate dehydrogenase 95.3 0.095 2.1E-06 51.4 9.2 71 75-164 188-258 (385)
470 cd08239 THR_DH_like L-threonin 95.3 0.15 3.2E-06 49.2 10.5 76 78-164 163-241 (339)
471 PRK08057 cobalt-precorrin-6x r 95.3 0.22 4.8E-06 45.7 10.9 93 79-198 2-94 (248)
472 PRK05476 S-adenosyl-L-homocyst 95.3 0.056 1.2E-06 53.6 7.4 38 76-114 209-246 (425)
473 PRK14191 bifunctional 5,10-met 95.2 0.075 1.6E-06 49.6 7.7 58 76-165 154-211 (285)
474 PRK14189 bifunctional 5,10-met 95.2 0.052 1.1E-06 50.6 6.6 57 76-164 155-211 (285)
475 PRK01438 murD UDP-N-acetylmura 95.2 0.1 2.2E-06 53.1 9.4 76 77-165 14-89 (480)
476 cd05188 MDR Medium chain reduc 95.2 0.24 5.3E-06 45.5 11.3 36 77-113 133-168 (271)
477 PRK06436 glycerate dehydrogena 95.2 0.073 1.6E-06 50.5 7.7 97 75-210 118-214 (303)
478 PRK03562 glutathione-regulated 95.2 0.14 3E-06 53.9 10.4 73 79-162 400-472 (621)
479 cd01490 Ube1_repeat2 Ubiquitin 95.2 0.32 6.9E-06 48.3 12.3 109 81-211 1-136 (435)
480 cd01488 Uba3_RUB Ubiquitin act 95.2 0.28 6E-06 46.2 11.3 77 81-162 1-96 (291)
481 PRK14176 bifunctional 5,10-met 95.2 0.058 1.2E-06 50.3 6.7 58 76-165 161-218 (287)
482 PRK09880 L-idonate 5-dehydroge 95.1 0.16 3.5E-06 49.1 10.2 75 78-164 169-245 (343)
483 COG0373 HemA Glutamyl-tRNA red 95.1 0.076 1.6E-06 52.1 7.7 75 76-166 175-250 (414)
484 cd00401 AdoHcyase S-adenosyl-L 95.1 0.082 1.8E-06 52.2 7.9 69 76-164 199-267 (413)
485 PLN03154 putative allyl alcoho 95.0 0.1 2.3E-06 50.7 8.6 36 78-113 158-193 (348)
486 PRK09310 aroDE bifunctional 3- 95.0 0.057 1.2E-06 54.7 6.9 38 76-114 329-366 (477)
487 cd08250 Mgc45594_like Mgc45594 95.0 0.35 7.6E-06 46.2 12.2 37 77-113 138-174 (329)
488 cd05276 p53_inducible_oxidored 95.0 0.098 2.1E-06 49.4 8.2 77 78-164 139-218 (323)
489 cd08293 PTGR2 Prostaglandin re 95.0 0.13 2.7E-06 49.8 9.0 35 79-113 155-190 (345)
490 cd08289 MDR_yhfp_like Yhfp put 94.9 0.23 4.9E-06 47.5 10.5 37 78-114 146-182 (326)
491 PRK09424 pntA NAD(P) transhydr 94.9 0.12 2.5E-06 52.6 8.7 37 77-114 163-199 (509)
492 COG0136 Asd Aspartate-semialde 94.9 0.079 1.7E-06 50.2 7.0 26 79-104 1-26 (334)
493 cd08292 ETR_like_2 2-enoyl thi 94.9 0.28 6.1E-06 46.7 11.2 76 78-164 139-218 (324)
494 PRK14179 bifunctional 5,10-met 94.9 0.062 1.3E-06 50.1 6.2 35 76-110 155-189 (284)
495 PRK08040 putative semialdehyde 94.9 0.099 2.1E-06 50.3 7.7 35 77-111 2-39 (336)
496 PRK14190 bifunctional 5,10-met 94.9 0.1 2.2E-06 48.7 7.4 58 76-165 155-212 (284)
497 cd05288 PGDH Prostaglandin deh 94.9 0.33 7.1E-06 46.4 11.4 36 78-113 145-180 (329)
498 TIGR00978 asd_EA aspartate-sem 94.8 0.14 3.1E-06 49.6 8.8 32 80-111 1-33 (341)
499 PF10727 Rossmann-like: Rossma 94.8 0.065 1.4E-06 43.7 5.4 88 77-166 8-108 (127)
500 PRK10537 voltage-gated potassi 94.8 0.3 6.6E-06 48.1 11.1 71 79-162 240-310 (393)
No 1
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=6.5e-50 Score=358.39 Aligned_cols=309 Identities=28% Similarity=0.438 Sum_probs=270.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+||||+|.+.+|++.|++|+++|+........+... .+.++++|+.|.+.+.++|++.+||.||
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~--------~~~f~~gDi~D~~~L~~vf~~~~idaVi 72 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL--------QFKFYEGDLLDRALLTAVFEENKIDAVV 72 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc--------cCceEEeccccHHHHHHHHHhcCCCEEE
Confidence 68999999999999999999999999999999776544333211 1689999999999999999999999999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
|+||...+..+..+|-.+++.|+.||.+|+++|++++++ +|||.||+.+||.....|+.|+.+. .|.++||.||++.|
T Consensus 73 HFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~-~~vFSStAavYG~p~~~PI~E~~~~-~p~NPYG~sKlm~E 150 (329)
T COG1087 73 HFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK-KFIFSSTAAVYGEPTTSPISETSPL-APINPYGRSKLMSE 150 (329)
T ss_pred ECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC-EEEEecchhhcCCCCCcccCCCCCC-CCCCcchhHHHHHH
Confidence 999999999999999999999999999999999999987 9999999999999999999999987 69999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCC---------CCCcHHHHHHHHHcCCc-eeEEecC---CCCccccccccHHHH
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGR---------PDMAYFFFTRDIIRGKR-ITVYEAP---DGASVARDFTYIDDI 306 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~i~v~Dv 306 (424)
++++.+.+.++++++++|-+++.|.... .+.+++.++..++...+ +.+|... .++...||||||.|+
T Consensus 151 ~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DL 230 (329)
T COG1087 151 EILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDL 230 (329)
T ss_pred HHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHH
Confidence 9999999999999999999999985321 13456767666665444 5666321 357889999999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHh
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQR 386 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~ 386 (424)
|++|+.+++..... + ...+||+++|...|+.|+++.+++..|.+.+.+..+. +++|...++.|.+|+++
T Consensus 231 A~aH~~Al~~L~~~-g---------~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~~~~~R-R~GDpa~l~Ad~~kA~~ 299 (329)
T COG1087 231 ADAHVLALKYLKEG-G---------SNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPVEIAPR-RAGDPAILVADSSKARQ 299 (329)
T ss_pred HHHHHHHHHHHHhC-C---------ceeEEEccCCCceeHHHHHHHHHHHhCCcCceeeCCC-CCCCCceeEeCHHHHHH
Confidence 99999999887641 1 1169999999999999999999999999998887664 68999999999999999
Q ss_pred HcCCcccC-CHHHHHHHHHHHHHH
Q 042406 387 ELGYMPTT-DLETGLKKFVRWYLS 409 (424)
Q Consensus 387 ~LG~~p~~-~l~~~l~~~v~~~~~ 409 (424)
+|||+|++ +|+++++.+..|..+
T Consensus 300 ~Lgw~p~~~~L~~ii~~aw~W~~~ 323 (329)
T COG1087 300 ILGWQPTYDDLEDIIKDAWDWHQQ 323 (329)
T ss_pred HhCCCcccCCHHHHHHHHHHHhhh
Confidence 99999998 999999999999985
No 2
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=3.1e-50 Score=358.49 Aligned_cols=311 Identities=27% Similarity=0.429 Sum_probs=276.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|++|||||.||||+.+++.++++.. +|+.+|...= ..... ........++..++++|++|.+.+.++|++.++|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTY--Agn~~-~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~~~D~ 77 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTY--AGNLE-NLADVEDSPRYRFVQGDICDRELVDRLFKEYQPDA 77 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccc--cCCHH-HHHhhhcCCCceEEeccccCHHHHHHHHHhcCCCe
Confidence 6799999999999999999999864 5788876431 11111 11223356799999999999999999999888899
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCC--CCCCCCCCCCCCChHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKV--PFSEKDRTDQPASLYAATK 235 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~--~~~e~~~~~~~~~~Y~~sK 235 (424)
|+|.|+-.+++.+-.+|+..+++|+.||.+||+++++....-+|+++|+..|||..... .++|+++. .|.++|++||
T Consensus 78 VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~-~PsSPYSASK 156 (340)
T COG1088 78 VVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPY-NPSSPYSASK 156 (340)
T ss_pred EEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCC-CCCCCcchhh
Confidence 99999999999999999999999999999999999999865589999999999975543 68888866 9999999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhh
Q 042406 236 KAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315 (424)
Q Consensus 236 ~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 315 (424)
+++..+++.+.+.+|++++|.|+++-|||...+..+++.++.+++.|++++++ |+|.+.|||+||+|-|+|+..++.
T Consensus 157 AasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvY---GdG~~iRDWl~VeDh~~ai~~Vl~ 233 (340)
T COG1088 157 AASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVY---GDGLQIRDWLYVEDHCRAIDLVLT 233 (340)
T ss_pred hhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCcee---cCCcceeeeEEeHhHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999 899999999999999999999998
Q ss_pred hccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccc-----cccccCCCCCCcccccCChHHHHhHcCC
Q 042406 316 TAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE-----TKVLPLPRNGDVQFTHANISLAQRELGY 390 (424)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-----~~~~~~~~~~~~~~~~~d~s~~~~~LG~ 390 (424)
+... |++|||+++...+--|+++.|.+.++...+ +.++. .+++...+..+|.+|++++|||
T Consensus 234 kg~~-------------GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~~~~li~~V~-DRpGHD~RYaid~~Ki~~eLgW 299 (340)
T COG1088 234 KGKI-------------GETYNIGGGNERTNLEVVKTICELLGKDKPDYRDLITFVE-DRPGHDRRYAIDASKIKRELGW 299 (340)
T ss_pred cCcC-------------CceEEeCCCccchHHHHHHHHHHHhCccccchhhheEecc-CCCCCccceeechHHHhhhcCC
Confidence 8653 389999999999999999999999998777 44443 5788888889999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHh
Q 042406 391 MPTTDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 391 ~p~~~l~~~l~~~v~~~~~~~ 411 (424)
.|++++|+||+++++||+++.
T Consensus 300 ~P~~~fe~GlrkTv~WY~~N~ 320 (340)
T COG1088 300 RPQETFETGLRKTVDWYLDNE 320 (340)
T ss_pred CcCCCHHHHHHHHHHHHHhch
Confidence 999999999999999999853
No 3
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=100.00 E-value=2.1e-47 Score=371.08 Aligned_cols=319 Identities=28% Similarity=0.450 Sum_probs=258.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhh--hhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKG--LLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++|+|+||||+||||++|+++|+++|++|++++|............... .....++.++.+|+.|.+.+.++++++
T Consensus 12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~~ 91 (348)
T PRK15181 12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKNV 91 (348)
T ss_pred cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhCC
Confidence 356789999999999999999999999999999998654322222111110 111246889999999999999999865
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHH
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAA 233 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~ 233 (424)
|+|||+|+.........++...+++|+.|+.+++++|++.+++ +|||+||+++||.....+..|+++. .|.+.|+.
T Consensus 92 --d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~-~~v~~SS~~vyg~~~~~~~~e~~~~-~p~~~Y~~ 167 (348)
T PRK15181 92 --DYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVS-SFTYAASSSTYGDHPDLPKIEERIG-RPLSPYAV 167 (348)
T ss_pred --CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeechHhhCCCCCCCCCCCCCC-CCCChhhH
Confidence 9999999987666666778889999999999999999999876 9999999999997666666776654 67889999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC----CcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHH
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD----MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKG 309 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 309 (424)
||.++|.+++.+.+.++++++++||++||||+..++ .+++.++..++.++++.++ +++++.++|+|++|+|++
T Consensus 168 sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~---g~g~~~rd~i~v~D~a~a 244 (348)
T PRK15181 168 TKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYIN---GDGSTSRDFCYIENVIQA 244 (348)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEe---CCCCceEeeEEHHHHHHH
Confidence 999999999998888899999999999999976543 4677888888888888877 688999999999999999
Q ss_pred HHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccc------ccccccCCCCCCcccccCChHH
Q 042406 310 CLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA------ETKVLPLPRNGDVQFTHANISL 383 (424)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~------~~~~~~~~~~~~~~~~~~d~s~ 383 (424)
++.++...... ..+++||+++++.+|++|+++.+.+.++... .... ...+..+.....+|.+|
T Consensus 245 ~~~~~~~~~~~----------~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~k 313 (348)
T PRK15181 245 NLLSATTNDLA----------SKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRAEPIY-KDFRDGDVKHSQADITK 313 (348)
T ss_pred HHHHHhccccc----------CCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCCCccc-CCCCCCcccccccCHHH
Confidence 99877543210 1237999999999999999999999987421 1111 11234455567899999
Q ss_pred HHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 384 AQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
++++|||.|+++++|+|+++++|++.+.+
T Consensus 314 ~~~~lGw~P~~sl~egl~~~~~w~~~~~~ 342 (348)
T PRK15181 314 IKTFLSYEPEFDIKEGLKQTLKWYIDKHS 342 (348)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999987644
No 4
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=1.6e-46 Score=339.95 Aligned_cols=319 Identities=45% Similarity=0.674 Sum_probs=282.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+++||||||+||||+|.+.+|+++|+.|+++|...+...+.....+.......++.++++|++|.++++++|+..++|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 57899999999999999999999999999999999888887777776655568999999999999999999999999999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
+|.|+...+.++..+|-.++.+|+.||.+|++.|+++++ +.+|+.||+.+||.....|++|+++...|.++||.+|.+.
T Consensus 82 ~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~-~~~V~sssatvYG~p~~ip~te~~~t~~p~~pyg~tK~~i 160 (343)
T KOG1371|consen 82 MHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNV-KALVFSSSATVYGLPTKVPITEEDPTDQPTNPYGKTKKAI 160 (343)
T ss_pred EeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCC-ceEEEecceeeecCcceeeccCcCCCCCCCCcchhhhHHH
Confidence 999999999999999999999999999999999999995 5999999999999999999999999867999999999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccC--CCCCCCCcHHHHH----------------HHHHcCCceeEEecCCCCcccccc
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYG--PWGRPDMAYFFFT----------------RDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G--~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
|.++..+++.++.+++.||.++++| |++..++....+. ....-|.+.... +++..+++
T Consensus 161 E~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~----dgt~vrdy 236 (343)
T KOG1371|consen 161 EEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTI----DGTIVRDY 236 (343)
T ss_pred HHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCccccc----CCCeeecc
Confidence 9999999999899999999999999 6554332221111 111124444442 56899999
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHAN 380 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d 380 (424)
+|+-|.|+.++.+++..... .+.++||++.+...++.+|+..+++.+|.+.+...++. +.++...++.+
T Consensus 237 i~v~Dla~~h~~al~k~~~~----------~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~~-R~gdv~~~ya~ 305 (343)
T KOG1371|consen 237 IHVLDLADGHVAALGKLRGA----------AEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVPR-RNGDVAFVYAN 305 (343)
T ss_pred eeeEehHHHHHHHhhccccc----------hheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccCC-CCCCceeeeeC
Confidence 99999999999999887642 33479999999999999999999999999999999998 99999999999
Q ss_pred hHHHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 381 ISLAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 381 ~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
.+++.++|||+|.+++++++++++.|+.++...
T Consensus 306 ~~~a~~elgwk~~~~iee~c~dlw~W~~~np~g 338 (343)
T KOG1371|consen 306 PSKAQRELGWKAKYGLQEMLKDLWRWQKQNPSG 338 (343)
T ss_pred hHHHHHHhCCccccCHHHHHHHHHHHHhcCCCc
Confidence 999999999999999999999999999887654
No 5
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=100.00 E-value=2.4e-44 Score=356.65 Aligned_cols=306 Identities=27% Similarity=0.388 Sum_probs=249.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
..|+|+||||+||||++|+++|+++|++|++++|.......... ......+++++.+|+.+.. +. ++|+
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~----~~~~~~~~~~~~~Di~~~~-----~~--~~D~ 187 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLV----HLFGNPRFELIRHDVVEPI-----LL--EVDQ 187 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhh----hhccCCceEEEECcccccc-----cc--CCCE
Confidence 46899999999999999999999999999999986432111111 1112346889999997753 33 4599
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC----CCCCCChHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR----TDQPASLYAA 233 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~----~~~~~~~Y~~ 233 (424)
|||+|+.........++...+.+|+.|+.+++++|++.+. +||++||.+|||.....+.+|+.. +..|.+.|+.
T Consensus 188 ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~--r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~ 265 (436)
T PLN02166 188 IYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDE 265 (436)
T ss_pred EEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHH
Confidence 9999998665444557788999999999999999999874 899999999999765556766631 3356788999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC--CCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP--DMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
+|.++|.+++.+.+.++++++++||++||||+... +..+..++..++.++++.++ +++++.++|+|++|+|++++
T Consensus 266 SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~---g~g~~~rdfi~V~Dva~ai~ 342 (436)
T PLN02166 266 GKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVY---GDGKQTRSFQYVSDLVDGLV 342 (436)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEe---CCCCeEEeeEEHHHHHHHHH
Confidence 99999999999998889999999999999997542 34567788889999988877 67889999999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCc
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYM 391 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~ 391 (424)
.+++... +++||+++++.+|+.|+++.+.+.+|.+..+...+. ...+......|++|++++|||+
T Consensus 343 ~~~~~~~--------------~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~-~~~~~~~~~~d~~Ka~~~LGw~ 407 (436)
T PLN02166 343 ALMEGEH--------------VGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPN-TADDPHKRKPDISKAKELLNWE 407 (436)
T ss_pred HHHhcCC--------------CceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCC-CCCCccccccCHHHHHHHcCCC
Confidence 9886432 168999999999999999999999998766655543 3445566678999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHhccC
Q 042406 392 PTTDLETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 392 p~~~l~~~l~~~v~~~~~~~~~~ 414 (424)
|+++++++|+++++|++....+.
T Consensus 408 P~~sl~egl~~~i~~~~~~~~~~ 430 (436)
T PLN02166 408 PKISLREGLPLMVSDFRNRILNE 430 (436)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999998866554
No 6
>PLN02572 UDP-sulfoquinovose synthase
Probab=100.00 E-value=1.1e-44 Score=360.63 Aligned_cols=324 Identities=24% Similarity=0.310 Sum_probs=250.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhh-------------HHHHH-hhhhccCCeEEEEcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-------------LKKAR-KGLLERAGVFVIDAD 139 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~~-~~~~~~~~v~~~~~D 139 (424)
+...++|+||||||+||||++|+++|+++|++|++++|........ ..... .......+++++.+|
T Consensus 42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D 121 (442)
T PLN02572 42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD 121 (442)
T ss_pred CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence 4457889999999999999999999999999999998643211000 00000 001112468999999
Q ss_pred CCCHHHHHHHhhccCccEEEEcccccCchhhccCh---HHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCC
Q 042406 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNP---NSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKV 216 (424)
Q Consensus 140 l~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~---~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~ 216 (424)
++|.+.+.+++++.++|+|||+|+.........++ +..+++|+.|+.+++++|++.+++++||++||.++||... .
T Consensus 122 l~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~vYG~~~-~ 200 (442)
T PLN02572 122 ICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMGEYGTPN-I 200 (442)
T ss_pred CCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecceecCCCC-C
Confidence 99999999999987889999999875544444333 4567899999999999999988755899999999999542 1
Q ss_pred CCCC-----------CC--CCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC--------------
Q 042406 217 PFSE-----------KD--RTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD-------------- 269 (424)
Q Consensus 217 ~~~e-----------~~--~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~-------------- 269 (424)
+++| ++ .+..|.+.|+.||.++|.+++.+++.+|++++++||++||||+....
T Consensus 201 ~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~ 280 (442)
T PLN02572 201 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYDG 280 (442)
T ss_pred CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCccc
Confidence 2222 21 13367789999999999999999998999999999999999985431
Q ss_pred ---CcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccH
Q 042406 270 ---MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPV 346 (424)
Q Consensus 270 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~ 346 (424)
..++.++..++.++++.++ +++++.++|+||+|+|++++.+++..... ....+||+++ +.+|+
T Consensus 281 ~~~~~i~~~~~~~~~g~~i~v~---g~G~~~Rdfi~V~Dva~a~~~al~~~~~~----------g~~~i~Nigs-~~~si 346 (442)
T PLN02572 281 VFGTALNRFCVQAAVGHPLTVY---GKGGQTRGFLDIRDTVRCIEIAIANPAKP----------GEFRVFNQFT-EQFSV 346 (442)
T ss_pred chhhHHHHHHHHHhcCCCceec---CCCCEEECeEEHHHHHHHHHHHHhChhhc----------CceeEEEeCC-CceeH
Confidence 3455667778888888777 68899999999999999999998864211 0125899986 67999
Q ss_pred HHHHHHHHHH---hCcccccccccCC-CCCCcccccCChHHHHhHcCCcccC---CHHHHHHHHHHHHHHHhcc
Q 042406 347 SRLVSLLEKI---LKVKAETKVLPLP-RNGDVQFTHANISLAQRELGYMPTT---DLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 347 ~el~~~i~~~---~g~~~~~~~~~~~-~~~~~~~~~~d~s~~~~~LG~~p~~---~l~~~l~~~v~~~~~~~~~ 413 (424)
.|+++++.+. +|.+..+...+.+ +..+......|.+|++ +|||+|++ ++++++.++++||++.-..
T Consensus 347 ~el~~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~-~LGw~p~~~~~~l~~~l~~~~~~~~~~~~~ 419 (442)
T PLN02572 347 NELAKLVTKAGEKLGLDVEVISVPNPRVEAEEHYYNAKHTKLC-ELGLEPHLLSDSLLDSLLNFAVKYKDRVDT 419 (442)
T ss_pred HHHHHHHHHHHHhhCCCCCeeeCCCCcccccccccCccHHHHH-HcCCCCCCcHHHHHHHHHHHHHHHHhhcch
Confidence 9999999999 8877666555433 2333446678999997 59999998 8999999999999865544
No 7
>PLN02206 UDP-glucuronate decarboxylase
Probab=100.00 E-value=1.3e-43 Score=351.90 Aligned_cols=303 Identities=26% Similarity=0.395 Sum_probs=246.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++|+||||||+||||++|++.|+++|++|++++|......... .......+++++.+|+.+.. +. ++|+
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~----~~~~~~~~~~~i~~D~~~~~-----l~--~~D~ 186 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENV----MHHFSNPNFELIRHDVVEPI-----LL--EVDQ 186 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhh----hhhccCCceEEEECCccChh-----hc--CCCE
Confidence 5699999999999999999999999999999987533211111 11123457889999998753 33 3599
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC----CCCCCChHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR----TDQPASLYAA 233 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~----~~~~~~~Y~~ 233 (424)
|||+|+...+.....++...+++|+.|+.+++++|++.+. +||++||+.+||.....+..|+.+ +..+.+.|+.
T Consensus 187 ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~--r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~ 264 (442)
T PLN02206 187 IYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA--RFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDE 264 (442)
T ss_pred EEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC--EEEEECChHHhCCCCCCCCCccccccCCCCCccchHHH
Confidence 9999998765555567888999999999999999999874 899999999998765556666531 2245688999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC--CCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR--PDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
+|.++|.++..+.+.++++++++||+++|||+.. ....++.++..++.++++.++ +++++.++|+|++|+|++++
T Consensus 265 SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~---g~G~~~rdfi~V~Dva~ai~ 341 (442)
T PLN02206 265 GKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVY---GDGKQTRSFQFVSDLVEGLM 341 (442)
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEe---CCCCEEEeEEeHHHHHHHHH
Confidence 9999999999998888999999999999999753 234566788888888888877 67889999999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCc
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYM 391 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~ 391 (424)
.+++... +++||+++++.+|+.|+++.+.+.++.+..+...+. ...+......|++|++++|||+
T Consensus 342 ~a~e~~~--------------~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~-~~~~~~~~~~d~sKa~~~LGw~ 406 (442)
T PLN02206 342 RLMEGEH--------------VGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPN-TEDDPHKRKPDITKAKELLGWE 406 (442)
T ss_pred HHHhcCC--------------CceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCC-CCCCccccccCHHHHHHHcCCC
Confidence 9886432 158999999999999999999999987766554443 2334455678999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHh
Q 042406 392 PTTDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 392 p~~~l~~~l~~~v~~~~~~~ 411 (424)
|+++++|+|+++++|+++..
T Consensus 407 P~~~l~egl~~~~~~~~~~~ 426 (442)
T PLN02206 407 PKVSLRQGLPLMVKDFRQRV 426 (442)
T ss_pred CCCCHHHHHHHHHHHHHHhh
Confidence 99999999999999998743
No 8
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=100.00 E-value=2.9e-44 Score=348.76 Aligned_cols=313 Identities=23% Similarity=0.273 Sum_probs=248.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchh-hhHHHHHhh--hhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE-TSLKKARKG--LLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~--~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+||||||+||||++|+++|+++|++|++++|+.+... ......... .....+++++.+|++|.+.+.+++++.++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 58999999999999999999999999999999764211 111111000 001246899999999999999999988889
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCC--CeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ--PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
+|||+|+.........++...+++|+.|+.+++++|++.+.. ++||++||.++||.....+.+|+.+. .|.+.|+.|
T Consensus 81 ~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~-~p~~~Y~~s 159 (343)
T TIGR01472 81 EIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPF-YPRSPYAAA 159 (343)
T ss_pred EEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCC-CCCChhHHH
Confidence 999999986654455566788899999999999999988754 38999999999997655677777765 788999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCC---cHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDM---AYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
|.++|.+++.+++++++++++.|+.++|||+...+. .+..++..+..+++..++. +++++.++|+||+|+|++++
T Consensus 160 K~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~g~~~rd~i~V~D~a~a~~ 237 (343)
T TIGR01472 160 KLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYL--GNLDAKRDWGHAKDYVEAMW 237 (343)
T ss_pred HHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceee--CCCccccCceeHHHHHHHHH
Confidence 999999999999888999999999999999743322 2334455566676433221 67889999999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccc-------------------cccC-CCC
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETK-------------------VLPL-PRN 371 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-------------------~~~~-~~~ 371 (424)
.+++.... ++|||++++++|+.|+++.+.+.+|.+..+. ..+. .++
T Consensus 238 ~~~~~~~~--------------~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (343)
T TIGR01472 238 LMLQQDKP--------------DDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRP 303 (343)
T ss_pred HHHhcCCC--------------ccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCC
Confidence 99875321 5799999999999999999999999654321 1111 234
Q ss_pred CCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHH
Q 042406 372 GDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLS 409 (424)
Q Consensus 372 ~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~ 409 (424)
.+......|++|++++|||+|+++++|+|+++++|+++
T Consensus 304 ~~~~~~~~d~~k~~~~lgw~p~~~l~egi~~~~~~~~~ 341 (343)
T TIGR01472 304 TEVDLLLGDATKAKEKLGWKPEVSFEKLVKEMVEEDLE 341 (343)
T ss_pred CccchhcCCHHHHHHhhCCCCCCCHHHHHHHHHHHHHh
Confidence 55666778999999999999999999999999999874
No 9
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=100.00 E-value=6.8e-44 Score=347.92 Aligned_cols=313 Identities=26% Similarity=0.398 Sum_probs=248.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEE-EeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLG-LDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
+|+||||||+||||++|++.|+++|+.|++ ++|.... .. ..... ......++.++.+|++|.+++.+++++.++|+
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~-~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~ 77 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA-GN-LMSLA-PVAQSERFAFEKVDICDRAELARVFTEHQPDC 77 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc-cc-hhhhh-hcccCCceEEEECCCcChHHHHHHHhhcCCCE
Confidence 368999999999999999999999987554 4543221 11 01111 11122468899999999999999999767899
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc---------CCCCeEEEecCCcccCCCC--CCCCCCCCCCCC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS---------DPQPAIVWASSSSVYGVNK--KVPFSEKDRTDQ 226 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---------~~~~~~v~~SS~~vyg~~~--~~~~~e~~~~~~ 226 (424)
|||+||.........+++..+++|+.|+.+++++|++. ++ ++||++||.++||... ..+++|+.+. .
T Consensus 78 Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~-~~~i~~SS~~vyg~~~~~~~~~~E~~~~-~ 155 (355)
T PRK10217 78 VMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSA-FRFHHISTDEVYGDLHSTDDFFTETTPY-A 155 (355)
T ss_pred EEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCc-eEEEEecchhhcCCCCCCCCCcCCCCCC-C
Confidence 99999986654445567889999999999999999863 33 4899999999998532 3457776654 6
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 306 (424)
|.+.|+.||.++|.+++.++++++++++++||++||||+..++.+++.++..+..+.++.++ +++++.++|+|++|+
T Consensus 156 p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~---g~g~~~~~~i~v~D~ 232 (355)
T PRK10217 156 PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVY---GNGQQIRDWLYVEDH 232 (355)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEe---CCCCeeeCcCcHHHH
Confidence 78999999999999999998888999999999999999876666677777888888887776 678999999999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccccc-----------ccCCCCCCcc
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKV-----------LPLPRNGDVQ 375 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~-----------~~~~~~~~~~ 375 (424)
|+++..+++... .+++||+++++++|+.|+++.+.+.++...+... ....++.+..
T Consensus 233 a~a~~~~~~~~~-------------~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (355)
T PRK10217 233 ARALYCVATTGK-------------VGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDL 299 (355)
T ss_pred HHHHHHHHhcCC-------------CCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCc
Confidence 999999987532 1279999999999999999999999885322100 0111233445
Q ss_pred cccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 376 ~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
.+.+|++|++++|||.|+++++|+|+++++|++...+
T Consensus 300 ~~~~d~~k~~~~lg~~p~~~l~e~l~~~~~~~~~~~~ 336 (355)
T PRK10217 300 RYAIDASKIARELGWLPQETFESGMRKTVQWYLANES 336 (355)
T ss_pred ccccCHHHHHHhcCCCCcCcHHHHHHHHHHHHHhCHH
Confidence 5788999999999999999999999999999988644
No 10
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=100.00 E-value=1.1e-43 Score=344.32 Aligned_cols=320 Identities=22% Similarity=0.241 Sum_probs=254.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhh-hHHHHHh-hhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET-SLKKARK-GLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+.++|+||||||+||||++|+++|+++|++|++++|..+.... ....... ......++.++.+|++|.+.+.++++..
T Consensus 3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 82 (340)
T PLN02653 3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI 82 (340)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence 4568899999999999999999999999999999986543211 1111110 0111246899999999999999999988
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCC----CeEEEecCCcccCCCCCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ----PAIVWASSSSVYGVNKKVPFSEKDRTDQPAS 229 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~----~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~ 229 (424)
++|+|||||+.........+++..+++|+.|+.+++++|++.+.. .+||++||+++||.... +++|+++. .|.+
T Consensus 83 ~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~-~~~E~~~~-~p~~ 160 (340)
T PLN02653 83 KPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPP-PQSETTPF-HPRS 160 (340)
T ss_pred CCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCC-CCCCCCCC-CCCC
Confidence 889999999986655455667788899999999999999988764 38999999999997654 77777755 7889
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCc---HHHHHHHHHcCCceeEEecCCCCccccccccHHHH
Q 042406 230 LYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMA---YFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306 (424)
Q Consensus 230 ~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 306 (424)
.|+.||.++|.+++.+++++++.++..|+.++|||+...+.. +..++..+..+.+..++. +++++.++|+|++|+
T Consensus 161 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~g~~~rd~i~v~D~ 238 (340)
T PLN02653 161 PYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFL--GNLDASRDWGFAGDY 238 (340)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEe--CCCcceecceeHHHH
Confidence 999999999999999998889999999999999997544322 233445566776655432 678899999999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccc--ccccccC-CCCCCcccccCChHH
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA--ETKVLPL-PRNGDVQFTHANISL 383 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~--~~~~~~~-~~~~~~~~~~~d~s~ 383 (424)
|++++.+++.... +.||+++++++|+.|+++.+.+.+|.+. .....+. ..+.+.....+|++|
T Consensus 239 a~a~~~~~~~~~~--------------~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k 304 (340)
T PLN02653 239 VEAMWLMLQQEKP--------------DDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPRYFRPAEVDNLKGDASK 304 (340)
T ss_pred HHHHHHHHhcCCC--------------CcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcccCCccccccccCCHHH
Confidence 9999999985321 5799999999999999999999998642 2222221 234556667789999
Q ss_pred HHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 384 AQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
++++|||+|+++++|+|+++++|+++....
T Consensus 305 ~~~~lgw~p~~~l~~gi~~~~~~~~~~~~~ 334 (340)
T PLN02653 305 AREVLGWKPKVGFEQLVKMMVDEDLELAKR 334 (340)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHhcCc
Confidence 999999999999999999999999865543
No 11
>PLN02427 UDP-apiose/xylose synthase
Probab=100.00 E-value=8.3e-44 Score=350.90 Aligned_cols=318 Identities=22% Similarity=0.325 Sum_probs=243.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
+.+.|+||||||+||||++|+++|+++ |++|++++|+.+....... . .......+++++.+|+.|.+.+.++++++
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~-~-~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~- 87 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLE-P-DTVPWSGRIQFHRINIKHDSRLEGLIKMA- 87 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhc-c-ccccCCCCeEEEEcCCCChHHHHHHhhcC-
Confidence 345688999999999999999999999 5999999986432111000 0 00001246999999999999999999875
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC----------
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT---------- 224 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~---------- 224 (424)
|+|||+|+.........++...+..|+.++.+++++|++.+ ++||++||.++||.....+..|+.+.
T Consensus 88 -d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~ 164 (386)
T PLN02427 88 -DLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLK 164 (386)
T ss_pred -CEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCcCCCCCccccccccccccccc
Confidence 99999999865543445566778899999999999999876 49999999999996433222222110
Q ss_pred -----------CCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC-----------CCcHHHHHHHHHcC
Q 042406 225 -----------DQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP-----------DMAYFFFTRDIIRG 282 (424)
Q Consensus 225 -----------~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~-----------~~~~~~~~~~~~~~ 282 (424)
..+.+.|+.||.++|.++..+++.++++++++||++||||+... ..++..++..++.+
T Consensus 165 e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 244 (386)
T PLN02427 165 EDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRR 244 (386)
T ss_pred ccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcC
Confidence 12346799999999999999888889999999999999997531 12344566777888
Q ss_pred CceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC-CcccHHHHHHHHHHHhCccc
Q 042406 283 KRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT-TPVPVSRLVSLLEKILKVKA 361 (424)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~ 361 (424)
+++.++ +++++.++||||+|+|++++.++++... ..+++||++++ +.+|+.|+++.+.+.+|...
T Consensus 245 ~~~~~~---g~g~~~r~~i~V~Dva~ai~~al~~~~~-----------~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~ 310 (386)
T PLN02427 245 EPLKLV---DGGQSQRTFVYIKDAIEAVLLMIENPAR-----------ANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVS 310 (386)
T ss_pred CCeEEE---CCCCceECcEeHHHHHHHHHHHHhCccc-----------ccCceEEeCCCCCCccHHHHHHHHHHHhcccc
Confidence 888776 5678889999999999999999886431 12379999987 58999999999999998521
Q ss_pred c-----cc--cccC-----CCCCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 362 E-----TK--VLPL-----PRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 362 ~-----~~--~~~~-----~~~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
. .. ..+. +...+......|.+|++++|||+|+++++++|+++++|+++.+-.
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~gl~~~~~~~~~~~~~ 374 (386)
T PLN02427 311 GEPALEEPTVDVSSKEFYGEGYDDSDKRIPDMTIINKQLGWNPKTSLWDLLESTLTYQHKTYAE 374 (386)
T ss_pred ccccccccccccCcccccCccccchhhccCCHHHHHHhcCCCcCccHHHHHHHHHHHHHHHHHH
Confidence 0 11 0110 011344566789999999999999999999999999999998764
No 12
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=100.00 E-value=2.3e-43 Score=343.14 Aligned_cols=320 Identities=24% Similarity=0.251 Sum_probs=253.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+++|+||||||+||||+++++.|+++|++|++++|+........... . ...++.++.+|++|.+++.+++++.++|
T Consensus 2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~--~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~d 77 (349)
T TIGR02622 2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELL--N--LAKKIEDHFGDIRDAAKLRKAIAEFKPE 77 (349)
T ss_pred cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHH--h--hcCCceEEEccCCCHHHHHHHHhhcCCC
Confidence 35789999999999999999999999999999998765322211111 1 1236778999999999999999988899
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCC-CCCCCCCCCCCCCCChHHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNK-KVPFSEKDRTDQPASLYAATK 235 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~-~~~~~e~~~~~~~~~~Y~~sK 235 (424)
+|||+||.........++...+++|+.++.+++++|++.+..++||++||..+|+... ..++.|+++. .|.+.|+.||
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~-~p~~~Y~~sK 156 (349)
T TIGR02622 78 IVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPL-GGHDPYSSSK 156 (349)
T ss_pred EEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCC-CCCCcchhHH
Confidence 9999999765555566778899999999999999998876334999999999998643 2356666544 6788999999
Q ss_pred HHHHHHHHHHHHHh-------CCcEEEEEeccccCCCCC-CCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHH
Q 042406 236 KAGEAIAHAYNHIY-------GLSITGLRFFTVYGPWGR-PDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIV 307 (424)
Q Consensus 236 ~~~e~~~~~~~~~~-------~i~~~~vrp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 307 (424)
.++|.+++.+++++ +++++++||+++|||+.. .+.+++.++..+..++++.+ +++++.++|+|++|+|
T Consensus 157 ~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~----~~g~~~rd~i~v~D~a 232 (349)
T TIGR02622 157 ACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVII----RNPDATRPWQHVLEPL 232 (349)
T ss_pred HHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEE----CCCCcccceeeHHHHH
Confidence 99999999988764 899999999999999753 34567788888888888776 4678999999999999
Q ss_pred HHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC--CcccHHHHHHHHHHHhCc-ccccccccC-CCCCCcccccCChHH
Q 042406 308 KGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT--TPVPVSRLVSLLEKILKV-KAETKVLPL-PRNGDVQFTHANISL 383 (424)
Q Consensus 308 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~-~~~~~~~~~-~~~~~~~~~~~d~s~ 383 (424)
++++.+++....... ..+++|||+++ +++++.|+++.+.+.++. +..+...+. .+..+......|.+|
T Consensus 233 ~a~~~~~~~~~~~~~--------~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 304 (349)
T TIGR02622 233 SGYLLLAEKLFTGQA--------EFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSDLNHPHEARLLKLDSSK 304 (349)
T ss_pred HHHHHHHHHHhhcCc--------cccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccCCCCCcccceeecCHHH
Confidence 999988875321100 11379999974 689999999999987763 333322211 123444556789999
Q ss_pred HHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 384 AQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
++++|||+|+++++++|+++++|+.+.-+.
T Consensus 305 ~~~~lgw~p~~~l~~gi~~~i~w~~~~~~~ 334 (349)
T TIGR02622 305 ARTLLGWHPRWGLEEAVSRTVDWYKAWLRG 334 (349)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999887554
No 13
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=100.00 E-value=7.8e-43 Score=339.25 Aligned_cols=310 Identities=24% Similarity=0.354 Sum_probs=246.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCC-CHHHHHHHhhccCcc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN-DKSLLDKIFNVVAFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~v~~~~~~~~~d 156 (424)
+|+||||||+||||++|+++|+++ |++|++++|+.... .......+++++.+|+. +.+.+.++++++ |
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~--------~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~--d 70 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRL--------GDLVNHPRMHFFEGDITINKEWIEYHVKKC--D 70 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHH--------HHhccCCCeEEEeCCCCCCHHHHHHHHcCC--C
Confidence 478999999999999999999987 69999999843210 01112356899999998 778888888855 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC------CCCCCh
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT------DQPASL 230 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~------~~~~~~ 230 (424)
+|||+|+.........+++..+++|+.++.+++++|++.+ . +|||+||+.+||.....++.|++++ ..|.+.
T Consensus 71 ~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~-~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~ 148 (347)
T PRK11908 71 VILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-K-HLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWI 148 (347)
T ss_pred EEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-C-eEEEEecceeeccCCCcCcCccccccccCcCCCccch
Confidence 9999999866555567788899999999999999999886 4 9999999999997555566666532 245678
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC--------CCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP--------DMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
|+.+|.++|.+++.++..++++++++||+++|||+... ..+++.++..+..+.++.++ +++++.++|+|
T Consensus 149 Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~g~~~r~~i~ 225 (347)
T PRK11908 149 YACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLV---DGGSQKRAFTD 225 (347)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEe---cCCceeecccc
Confidence 99999999999999988889999999999999997431 23566788888889888776 56789999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC-CcccHHHHHHHHHHHhCcccccc-------cccCCC----
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT-TPVPVSRLVSLLEKILKVKAETK-------VLPLPR---- 370 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~-------~~~~~~---- 370 (424)
++|++++++.+++.+... ..+++||++++ ..+|+.|+++.+.+.++....+. ....+.
T Consensus 226 v~D~a~a~~~~~~~~~~~----------~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (347)
T PRK11908 226 IDDGIDALMKIIENKDGV----------ASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYY 295 (347)
T ss_pred HHHHHHHHHHHHhCcccc----------CCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhcc
Confidence 999999999998864310 12379999986 57999999999999998543321 111111
Q ss_pred ---CCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 371 ---NGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 371 ---~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
..+......|.+|+++.|||+|+++++++|+++++|++++...
T Consensus 296 ~~~~~~~~~~~~d~~k~~~~lGw~p~~~l~~~l~~~~~~~~~~~~~ 341 (347)
T PRK11908 296 GKGYQDVQNRVPKIDNTMQELGWAPKTTMDDALRRIFEAYRGHVAE 341 (347)
T ss_pred CcCcchhccccCChHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 1123345578999999999999999999999999999876544
No 14
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=100.00 E-value=2.9e-42 Score=336.03 Aligned_cols=313 Identities=26% Similarity=0.414 Sum_probs=244.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCe-EEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDG-VLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
|+||||||+||||++|+++|+++|+. |+++++....... .... ......+++++.+|++|.+++.+++++.++|+|
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~v 77 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNL--ESLA-DVSDSERYVFEHADICDRAELDRIFAQHQPDAV 77 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchH--HHHH-hcccCCceEEEEecCCCHHHHHHHHHhcCCCEE
Confidence 57999999999999999999999976 5556653311110 1111 111124678899999999999999987778999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc--------CCCCeEEEecCCcccCCCCC----------CCCCC
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS--------DPQPAIVWASSSSVYGVNKK----------VPFSE 220 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~--------~~~~~~v~~SS~~vyg~~~~----------~~~~e 220 (424)
||+||.........+++..+++|+.|+.+++++|++. +..++||++||.++||.... .+++|
T Consensus 78 ih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E 157 (352)
T PRK10084 78 MHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTE 157 (352)
T ss_pred EECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccc
Confidence 9999976543344567889999999999999999874 11238999999999985311 13556
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
+++. .|.+.|+.||.++|.+++.+++.++++++++||+.||||+.....+++.++..+..+.++.++ +++++.++|
T Consensus 158 ~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~ 233 (352)
T PRK10084 158 TTAY-APSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY---GKGDQIRDW 233 (352)
T ss_pred cCCC-CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEe---CCCCeEEee
Confidence 6554 788999999999999999998888999999999999999875555677777778888877776 678899999
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccc------c-ccCCCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETK------V-LPLPRNGD 373 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~------~-~~~~~~~~ 373 (424)
+|++|+|++++.+++... .+++||++++++.++.|+++.+.+.++...+.. . .......+
T Consensus 234 v~v~D~a~a~~~~l~~~~-------------~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~~~~~ 300 (352)
T PRK10084 234 LYVEDHARALYKVVTEGK-------------AGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVADRPGH 300 (352)
T ss_pred EEHHHHHHHHHHHHhcCC-------------CCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhccccccCCCC
Confidence 999999999998887532 127999999999999999999999998532211 0 01112333
Q ss_pred cccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 374 VQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 374 ~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
.....+|++|++++|||+|+++++++|+++++|++++..
T Consensus 301 ~~~~~~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~ 339 (352)
T PRK10084 301 DRRYAIDASKISRELGWKPQETFESGIRKTVEWYLANTE 339 (352)
T ss_pred CceeeeCHHHHHHHcCCCCcCCHHHHHHHHHHHHHhCHH
Confidence 445678999999999999999999999999999998643
No 15
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=100.00 E-value=2.1e-42 Score=361.40 Aligned_cols=313 Identities=22% Similarity=0.338 Sum_probs=250.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHH-HHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSL-LDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-v~~~~~~~~ 154 (424)
.++|+||||||+||||++|+++|+++ |++|++++|...... ......+++++.+|++|.+. ++++++++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~--------~~~~~~~~~~~~gDl~d~~~~l~~~l~~~- 383 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAIS--------RFLGHPRFHFVEGDISIHSEWIEYHIKKC- 383 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhh--------hhcCCCceEEEeccccCcHHHHHHHhcCC-
Confidence 36789999999999999999999986 799999999653211 11123478999999998655 57777754
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC------CCCC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT------DQPA 228 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~------~~~~ 228 (424)
|+|||+||...+.....+++..+++|+.++.+++++|++.+ ++|||+||+++||.....+++|+++. ..|.
T Consensus 384 -D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~ 460 (660)
T PRK08125 384 -DVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQR 460 (660)
T ss_pred -CEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCCCCCCcCccccccccCCCCCCc
Confidence 99999999876655566778899999999999999999987 48999999999997555567776542 1345
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC--------CCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP--------DMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
+.|+.||.++|.+++.+.+.++++++++||+++|||+... ...++.++..+..++++.++ +++++.++|
T Consensus 461 s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~---g~g~~~rd~ 537 (660)
T PRK08125 461 WIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLV---DGGKQKRCF 537 (660)
T ss_pred cchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEe---CCCceeece
Confidence 6899999999999999988889999999999999997532 24567788888888888776 678899999
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC-cccHHHHHHHHHHHhCcccccccccCCC---------
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT-PVPVSRLVSLLEKILKVKAETKVLPLPR--------- 370 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~--------- 370 (424)
+|++|+|++++.++++.... ..+++||+++++ .+|++|+++.+.+.+|.+......+...
T Consensus 538 i~v~Dva~a~~~~l~~~~~~----------~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 607 (660)
T PRK08125 538 TDIRDGIEALFRIIENKDNR----------CDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSS 607 (660)
T ss_pred eeHHHHHHHHHHHHhccccc----------cCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCcccccccccccc
Confidence 99999999999998764211 123799999985 7999999999999998543211111110
Q ss_pred -----CCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhccC
Q 042406 371 -----NGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 371 -----~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~~ 414 (424)
..+......|++|++++|||.|+++++|+|+++++|++++++..
T Consensus 608 ~~~~~~~~~~~~~~d~~ka~~~LGw~P~~~lee~l~~~i~~~~~~~~~~ 656 (660)
T PRK08125 608 YYGKGYQDVEHRKPSIRNARRLLDWEPKIDMQETIDETLDFFLRTVDLT 656 (660)
T ss_pred ccccccccccccCCChHHHHHHhCCCCCCcHHHHHHHHHHHHHhccccc
Confidence 12334556899999999999999999999999999999887753
No 16
>PLN02240 UDP-glucose 4-epimerase
Probab=100.00 E-value=1.2e-41 Score=331.59 Aligned_cols=326 Identities=27% Similarity=0.401 Sum_probs=252.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
++.+|+|+||||+||||++|+++|+++|++|++++|................ ....++.++.+|++|.+.+.+++++.+
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 4567899999999999999999999999999999985433222111111110 112468899999999999999998777
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
+|+|||+|+.........++...+++|+.++.+++++|++.+++ +||++||+++||.....+++|+.+. .+.+.|+.+
T Consensus 82 ~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~vyg~~~~~~~~E~~~~-~~~~~Y~~s 159 (352)
T PLN02240 82 FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCK-KLVFSSSATVYGQPEEVPCTEEFPL-SATNPYGRT 159 (352)
T ss_pred CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEccHHHhCCCCCCCCCCCCCC-CCCCHHHHH
Confidence 89999999975543344567889999999999999999988875 9999999999987666678887755 678999999
Q ss_pred HHHHHHHHHHHHHH-hCCcEEEEEeccccCCCCC----------CCCcHHHHHHHHHcCC--ceeEEec---CCCCcccc
Q 042406 235 KKAGEAIAHAYNHI-YGLSITGLRFFTVYGPWGR----------PDMAYFFFTRDIIRGK--RITVYEA---PDGASVAR 298 (424)
Q Consensus 235 K~~~e~~~~~~~~~-~~i~~~~vrp~~v~G~~~~----------~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~ 298 (424)
|.++|.+++.+... .+++++++|++++||++.. ...+.+ ++..+..++ .+.++.. .+++.+.+
T Consensus 160 K~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 238 (352)
T PLN02240 160 KLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMP-YVQQVAVGRRPELTVFGNDYPTKDGTGVR 238 (352)
T ss_pred HHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHH-HHHHHHhCCCCceEEeCCCCCCCCCCEEE
Confidence 99999999988754 5899999999999997431 112222 344455443 3444421 12578999
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCccccc
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTH 378 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 378 (424)
+|+|++|+|++++.+++....... ..+++||+++++++|+.|+++.+.+.+|.+.++...+. ...+.....
T Consensus 239 ~~i~v~D~a~a~~~a~~~~~~~~~--------~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-~~~~~~~~~ 309 (352)
T PLN02240 239 DYIHVMDLADGHIAALRKLFTDPD--------IGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPR-RPGDAEEVY 309 (352)
T ss_pred eeEEHHHHHHHHHHHHhhhhhccC--------CCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCC-CCCChhhhh
Confidence 999999999999988875421111 22379999999999999999999999998766554442 344445566
Q ss_pred CChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 379 ANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 379 ~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
.|++|++++|||+|+++++++|+++++|++++...
T Consensus 310 ~d~~k~~~~lg~~p~~~l~~~l~~~~~~~~~~~~~ 344 (352)
T PLN02240 310 ASTEKAEKELGWKAKYGIDEMCRDQWNWASKNPYG 344 (352)
T ss_pred cCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCccc
Confidence 89999999999999999999999999999987644
No 17
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=6.8e-43 Score=308.64 Aligned_cols=309 Identities=26% Similarity=0.421 Sum_probs=265.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...+++|+||||+||||+||++.|..+||.|+++|......... ...-.....++.+.-|+..+ ++.++
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n----~~~~~~~~~fel~~hdv~~p-----l~~ev-- 92 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKEN----LEHWIGHPNFELIRHDVVEP-----LLKEV-- 92 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhh----cchhccCcceeEEEeechhH-----HHHHh--
Confidence 45678999999999999999999999999999999866543222 22223456778888888765 77767
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC----CCCCCChH
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR----TDQPASLY 231 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~----~~~~~~~Y 231 (424)
|.|+|+|+.+++......+-.++..|..|+.+.+-.|++.+. ||+++||+.|||.....|..|+.+ +..|.++|
T Consensus 93 D~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~a--R~l~aSTseVYgdp~~hpq~e~ywg~vnpigpr~cy 170 (350)
T KOG1429|consen 93 DQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVGA--RFLLASTSEVYGDPLVHPQVETYWGNVNPIGPRSCY 170 (350)
T ss_pred hhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhCc--eEEEeecccccCCcccCCCccccccccCcCCchhhh
Confidence 999999999988777788889999999999999999999883 999999999999977777776654 33577999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC--CCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHH
Q 042406 232 AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR--PDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKG 309 (424)
Q Consensus 232 ~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 309 (424)
...|..+|.++..+.++.|+.+.|.|+.++|||... .....+.|..+.+++.++++| ++|.++|+|.||+|++++
T Consensus 171 degKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~---g~G~qtRSF~yvsD~Veg 247 (350)
T KOG1429|consen 171 DEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVY---GDGKQTRSFQYVSDLVEG 247 (350)
T ss_pred hHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEE---cCCcceEEEEeHHHHHHH
Confidence 999999999999999999999999999999999764 345678899999999999999 899999999999999999
Q ss_pred HHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcC
Q 042406 310 CLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELG 389 (424)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG 389 (424)
++.+++.+.. +.+||++++.+|+.||++++.++.+....++..+. .+.+.....-|.+++++.||
T Consensus 248 ll~Lm~s~~~--------------~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~-~~Ddp~kR~pDit~ake~Lg 312 (350)
T KOG1429|consen 248 LLRLMESDYR--------------GPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVEN-GPDDPRKRKPDITKAKEQLG 312 (350)
T ss_pred HHHHhcCCCc--------------CCcccCCccceeHHHHHHHHHHHcCCCcceeecCC-CCCCccccCccHHHHHHHhC
Confidence 9999998765 45999999999999999999999977666665553 36677777899999999999
Q ss_pred CcccCCHHHHHHHHHHHHHHHhccCC
Q 042406 390 YMPTTDLETGLKKFVRWYLSYYNSAS 415 (424)
Q Consensus 390 ~~p~~~l~~~l~~~v~~~~~~~~~~~ 415 (424)
|.|..+|+|+|..++.|+++...+.+
T Consensus 313 W~Pkv~L~egL~~t~~~fr~~i~~~~ 338 (350)
T KOG1429|consen 313 WEPKVSLREGLPLTVTYFRERIAREK 338 (350)
T ss_pred CCCCCcHHHhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999876643
No 18
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=100.00 E-value=7.7e-42 Score=327.88 Aligned_cols=311 Identities=26% Similarity=0.426 Sum_probs=250.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+||||+|+||++++++|+++| ++|++++|........ ... ......+++++.+|++|++++.++++..++|+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~v 77 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLE--NLA-DLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAV 77 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhh--hhh-hhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEE
Confidence 48999999999999999999987 7899988743211111 011 111224688999999999999999998667999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCC-CCCCCCCCCCCCChHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKV-PFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~-~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
||+|+.........+++..+++|+.++.+++++|++.+.+.++|++||.++||..... ++.|.++. .|.+.|+.+|..
T Consensus 78 i~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~-~~~~~Y~~sK~~ 156 (317)
T TIGR01181 78 VHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPL-APSSPYSASKAA 156 (317)
T ss_pred EEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCC-CCCCchHHHHHH
Confidence 9999986655555677889999999999999999987654489999999999965433 56666654 677899999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
+|.+++.++.+.+++++++||+.+|||+.....+++.++..+..++++.++ +++++.++|+|++|+|+++..++++.
T Consensus 157 ~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~i~v~D~a~~~~~~~~~~ 233 (317)
T TIGR01181 157 SDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVY---GDGQQVRDWLYVEDHCRAIYLVLEKG 233 (317)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEe---CCCceEEeeEEHHHHHHHHHHHHcCC
Confidence 999999998888999999999999999876666777888888888888776 57788999999999999999998753
Q ss_pred cccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCcccCCHH
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLE 397 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p~~~l~ 397 (424)
. .+++||+++++++++.|+++.+.+.+|.+..................+|++|+++.|||.|+++++
T Consensus 234 ~-------------~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~lG~~p~~~~~ 300 (317)
T TIGR01181 234 R-------------VGETYNIGGGNERTNLEVVETILELLGKDEDLITHVEDRPGHDRRYAIDASKIKRELGWAPKYTFE 300 (317)
T ss_pred C-------------CCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCCCccchhhhcCCHHHHHHHhCCCCCCcHH
Confidence 2 127999999999999999999999999754322211112233334568999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q 042406 398 TGLKKFVRWYLSYY 411 (424)
Q Consensus 398 ~~l~~~v~~~~~~~ 411 (424)
++++++++||+++.
T Consensus 301 ~~i~~~~~~~~~~~ 314 (317)
T TIGR01181 301 EGLRKTVQWYLDNE 314 (317)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999997654
No 19
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=100.00 E-value=1.1e-41 Score=332.79 Aligned_cols=307 Identities=25% Similarity=0.359 Sum_probs=245.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
.++|+||||||+||||++|++.|+++|++|++++|..+... .. ....++++.+|++|.+.+.++++++ |
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~------~~---~~~~~~~~~~Dl~d~~~~~~~~~~~--D 87 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM------SE---DMFCHEFHLVDLRVMENCLKVTKGV--D 87 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc------cc---ccccceEEECCCCCHHHHHHHHhCC--C
Confidence 46789999999999999999999999999999998542110 00 1123578899999999998888865 9
Q ss_pred EEEEcccccCc-hhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCC----CCCCCCCC-CCCCCCh
Q 042406 157 HVMHLAAQAGV-RYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKK----VPFSEKDR-TDQPASL 230 (424)
Q Consensus 157 ~vi~~Ag~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~----~~~~e~~~-~~~~~~~ 230 (424)
+|||+|+.... .....++...+..|+.++.+++++|++.+++ +|||+||.++||.... .++.|++. +..|.+.
T Consensus 88 ~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk-~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~ 166 (370)
T PLN02695 88 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 166 (370)
T ss_pred EEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCC-EEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCH
Confidence 99999986532 1223345667889999999999999999875 9999999999986432 23556542 4467899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC----CCcHHHHHHHHHc-CCceeEEecCCCCccccccccHHH
Q 042406 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP----DMAYFFFTRDIIR-GKRITVYEAPDGASVARDFTYIDD 305 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~v~D 305 (424)
|+.+|.++|.++..+++.+|++++++||++||||+... ......++..++. +.++.++ +++++.++|+|++|
T Consensus 167 Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~---g~g~~~r~~i~v~D 243 (370)
T PLN02695 167 YGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMW---GDGKQTRSFTFIDE 243 (370)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEe---CCCCeEEeEEeHHH
Confidence 99999999999999988889999999999999997642 2345567776665 4667776 67899999999999
Q ss_pred HHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHH
Q 042406 306 IVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQ 385 (424)
Q Consensus 306 va~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~ 385 (424)
++++++.+++... +++||+++++++|+.|+++.+.+..|.+.++...+.+ ........|++|++
T Consensus 244 ~a~ai~~~~~~~~--------------~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~--~~~~~~~~d~sk~~ 307 (370)
T PLN02695 244 CVEGVLRLTKSDF--------------REPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGP--EGVRGRNSDNTLIK 307 (370)
T ss_pred HHHHHHHHHhccC--------------CCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCC--CCccccccCHHHHH
Confidence 9999998876532 1689999999999999999999999976655544432 22234568999999
Q ss_pred hHcCCcccCCHHHHHHHHHHHHHHHhccC
Q 042406 386 RELGYMPTTDLETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 386 ~~LG~~p~~~l~~~l~~~v~~~~~~~~~~ 414 (424)
++|||.|+++++++|+++++|+.++....
T Consensus 308 ~~lgw~p~~~l~e~i~~~~~~~~~~~~~~ 336 (370)
T PLN02695 308 EKLGWAPTMRLKDGLRITYFWIKEQIEKE 336 (370)
T ss_pred HhcCCCCCCCHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999998876543
No 20
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-42 Score=306.45 Aligned_cols=311 Identities=25% Similarity=0.390 Sum_probs=262.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC--CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++++||||.||||++.+..+... .+..+.+|-..= ... .....+....++..++++|+.+...+..++...++|.
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~--~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~ 83 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDY--CSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDT 83 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccc--ccc-cchhhhhccCCCceEeeccccchHHHHhhhccCchhh
Confidence 78999999999999999999987 356666654221 001 1122223356789999999999999999998888999
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCC-CCCCCCCCCChHHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFS-EKDRTDQPASLYAATKK 236 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~-e~~~~~~~~~~Y~~sK~ 236 (424)
|+|.|+..++..+..++-.....|+.++..|+++++..+-.++|||+||..|||...+.... |.+.+ .|.++|++||+
T Consensus 84 vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~~-nPtnpyAasKa 162 (331)
T KOG0747|consen 84 VIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASLL-NPTNPYAASKA 162 (331)
T ss_pred hhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCccccccccccccC-CCCCchHHHHH
Confidence 99999999988888888889999999999999999999655699999999999998887777 55544 89999999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhh
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
++|.+++++.+.+|++++++|.++||||+..+.-.++.|+.....+++.++. |++.+.++|+|++|+++++.++++.
T Consensus 163 AaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~---g~g~~~rs~l~veD~~ea~~~v~~K 239 (331)
T KOG0747|consen 163 AAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIH---GDGLQTRSYLYVEDVSEAFKAVLEK 239 (331)
T ss_pred HHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCccee---cCcccceeeEeHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999998888899999988899999888 8999999999999999999999987
Q ss_pred ccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccc------cccCCCCCCcccccCChHHHHhHcCC
Q 042406 317 AKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETK------VLPLPRNGDVQFTHANISLAQRELGY 390 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~------~~~~~~~~~~~~~~~d~s~~~~~LG~ 390 (424)
.. .|++|||++..+.+..|+++.+.+.+.....-. ..-..++....+..+|.+|++ .|||
T Consensus 240 g~-------------~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~~v~dRp~nd~Ry~~~~eKik-~LGw 305 (331)
T KOG0747|consen 240 GE-------------LGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIFFVEDRPYNDLRYFLDDEKIK-KLGW 305 (331)
T ss_pred CC-------------ccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcceecCCCCcccccccccHHHHH-hcCC
Confidence 43 238999999999999999999999887633211 111123344445778999998 7999
Q ss_pred cccCCHHHHHHHHHHHHHHHh
Q 042406 391 MPTTDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 391 ~p~~~l~~~l~~~v~~~~~~~ 411 (424)
+|++++++||+.+++||.+..
T Consensus 306 ~~~~p~~eGLrktie~y~~~~ 326 (331)
T KOG0747|consen 306 RPTTPWEEGLRKTIEWYTKNF 326 (331)
T ss_pred cccCcHHHHHHHHHHHHHhhh
Confidence 999999999999999999876
No 21
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=100.00 E-value=7.6e-41 Score=324.27 Aligned_cols=318 Identities=26% Similarity=0.421 Sum_probs=246.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|+||||+||||++|++.|+++|++|++++|..+......... ......++.++.+|++|.+++.++++..++|+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vv 78 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVI--ERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVI 78 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHH--HHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEE
Confidence 67999999999999999999999999999987543322211111 1112345788999999999999999876789999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
|+|+.........++...+.+|+.++.+++++|++.+++ +||++||.++||.....+++|+++...|.+.|+.+|.++|
T Consensus 79 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E 157 (338)
T PRK10675 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK-NLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVE 157 (338)
T ss_pred ECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHH
Confidence 999976543334556788999999999999999999875 8999999999997666678887765467899999999999
Q ss_pred HHHHHHHHHh-CCcEEEEEeccccCCCCC------C----CCcHHHHHHHHHcCC--ceeEEec---CCCCccccccccH
Q 042406 240 AIAHAYNHIY-GLSITGLRFFTVYGPWGR------P----DMAYFFFTRDIIRGK--RITVYEA---PDGASVARDFTYI 303 (424)
Q Consensus 240 ~~~~~~~~~~-~i~~~~vrp~~v~G~~~~------~----~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~i~v 303 (424)
.+++.+++.. +++++++|++++|||... . ..+.+ ++..+..+. .+.++.. ..++.+.++|+|+
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (338)
T PRK10675 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMP-YIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHV 236 (338)
T ss_pred HHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHH-HHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEH
Confidence 9999998764 899999999999997421 1 11223 333444332 2444420 0246788999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHH
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISL 383 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~ 383 (424)
+|+|++++.+++..... ..+++||+++++++|+.|+++.+.+.+|.+.++...+. ...+.....+|++|
T Consensus 237 ~D~a~~~~~~~~~~~~~----------~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~~~k 305 (338)
T PRK10675 237 MDLADGHVAAMEKLANK----------PGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPR-REGDLPAYWADASK 305 (338)
T ss_pred HHHHHHHHHHHHhhhcc----------CCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCC-CCCchhhhhcCHHH
Confidence 99999999998753211 11279999999999999999999999998766554442 23344556789999
Q ss_pred HHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 384 AQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
+++.|||+|+++++++|+++++|++++..
T Consensus 306 ~~~~lg~~p~~~~~~~~~~~~~~~~~~~~ 334 (338)
T PRK10675 306 ADRELNWRVTRTLDEMAQDTWHWQSRHPQ 334 (338)
T ss_pred HHHHhCCCCcCcHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999988744
No 22
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=9.3e-41 Score=321.88 Aligned_cols=308 Identities=16% Similarity=0.156 Sum_probs=229.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++|+||||||+||||++|+++|+++|++|++++|+......... .........+++++.+|++|.+.+.++++++ |+
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~--d~ 80 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDH-LLALDGAKERLKLFKADLLDEGSFELAIDGC--ET 80 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHH-HHhccCCCCceEEEeCCCCCchHHHHHHcCC--CE
Confidence 57899999999999999999999999999999887653322111 1100011246889999999999999999865 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCC-----CCCCCCCCCCCC-----C
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNK-----KVPFSEKDRTDQ-----P 227 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~-----~~~~~e~~~~~~-----~ 227 (424)
||||||........+++...+++|+.|+.+++++|.+....++||++||.++|+... ..+++|+.+... +
T Consensus 81 vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~ 160 (325)
T PLN02989 81 VFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEER 160 (325)
T ss_pred EEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhccc
Confidence 999999754333334557789999999999999998753224999999988775422 234666655421 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC-CcHHHHHHHHHcCCceeEEecCCCCccccccccHHHH
Q 042406 228 ASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD-MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 306 (424)
.+.|+.||.++|.++..+.+.++++++++||+++|||+..+. .+...++..++.++... + ...++|+|++|+
T Consensus 161 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~-----~--~~~r~~i~v~Dv 233 (325)
T PLN02989 161 KQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF-----N--TTHHRFVDVRDV 233 (325)
T ss_pred ccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC-----C--CcCcCeeEHHHH
Confidence 468999999999999999888899999999999999986543 23444555666665431 1 245789999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHh
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQR 386 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~ 386 (424)
|++++.+++.+.. ++.||++ +..+|+.|+++.+.+.++..............+......|++|+++
T Consensus 234 a~a~~~~l~~~~~-------------~~~~ni~-~~~~s~~ei~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 299 (325)
T PLN02989 234 ALAHVKALETPSA-------------NGRYIID-GPVVTIKDIENVLREFFPDLCIADRNEDITELNSVTFNVCLDKVKS 299 (325)
T ss_pred HHHHHHHhcCccc-------------CceEEEe-cCCCCHHHHHHHHHHHCCCCCCCCCCCCcccccccCcCCCHHHHHH
Confidence 9999999886532 1589995 5579999999999999974221110000111122356788999875
Q ss_pred HcCCcccCCHHHHHHHHHHHHHHH
Q 042406 387 ELGYMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 387 ~LG~~p~~~l~~~l~~~v~~~~~~ 410 (424)
|||.|.++++|+|+++++|+++.
T Consensus 300 -lg~~p~~~l~~gi~~~~~~~~~~ 322 (325)
T PLN02989 300 -LGIIEFTPTETSLRDTVLSLKEK 322 (325)
T ss_pred -cCCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999753
No 23
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=100.00 E-value=6e-41 Score=352.16 Aligned_cols=314 Identities=26% Similarity=0.375 Sum_probs=250.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
++|+||||||+||||++|+++|+++ |++|++++|.... ....... ......+++++.+|++|.+.+.+++...++
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~--~~~~~l~-~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 81 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYC--SNLKNLN-PSKSSPNFKFVKGDIASADLVNYLLITEGI 81 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCcc--chhhhhh-hcccCCCeEEEECCCCChHHHHHHHhhcCC
Confidence 5689999999999999999999998 6899999874311 0011111 111235789999999999999888765578
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCC---CCCCCCCCCCCChHH
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP---FSEKDRTDQPASLYA 232 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~---~~e~~~~~~~~~~Y~ 232 (424)
|+|||+|+.........++...+++|+.|+.+++++|++.+..++|||+||..+||.....+ ..|+.+. .|.+.|+
T Consensus 82 D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~-~p~~~Y~ 160 (668)
T PLN02260 82 DTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQL-LPTNPYS 160 (668)
T ss_pred CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCC-CCCCCcH
Confidence 99999999876554555667889999999999999999987334999999999999754432 2344444 5778999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHH
Q 042406 233 ATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312 (424)
Q Consensus 233 ~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 312 (424)
.+|.++|.+++.+.+.++++++++||++||||+.....+++.++..+..+.++.++ +++++.++|+|++|+|++++.
T Consensus 161 ~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~---g~g~~~r~~ihV~Dva~a~~~ 237 (668)
T PLN02260 161 ATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIH---GDGSNVRSYLYCEDVAEAFEV 237 (668)
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEe---cCCCceEeeEEHHHHHHHHHH
Confidence 99999999999998888999999999999999876666777788888888888876 678899999999999999999
Q ss_pred HhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccccccc-CCCCCCcccccCChHHHHhHcCCc
Q 042406 313 GLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP-LPRNGDVQFTHANISLAQRELGYM 391 (424)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~-~~~~~~~~~~~~d~s~~~~~LG~~ 391 (424)
+++... .+++||+++++.+++.|+++.+.+.+|.+....... ..++........|++|++ +|||.
T Consensus 238 ~l~~~~-------------~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~~~~~p~~~~~~~~d~~k~~-~lGw~ 303 (668)
T PLN02260 238 VLHKGE-------------VGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKFVENRPFNDQRYFLDDQKLK-KLGWQ 303 (668)
T ss_pred HHhcCC-------------CCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeeecCCCCCCcceeecCHHHHH-HcCCC
Confidence 886532 127999999999999999999999999764321111 112333345568999996 69999
Q ss_pred ccCCHHHHHHHHHHHHHHHhc
Q 042406 392 PTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 392 p~~~l~~~l~~~v~~~~~~~~ 412 (424)
|+++++|+|+++++|++++.+
T Consensus 304 p~~~~~egl~~~i~w~~~~~~ 324 (668)
T PLN02260 304 ERTSWEEGLKKTMEWYTSNPD 324 (668)
T ss_pred CCCCHHHHHHHHHHHHHhChh
Confidence 999999999999999998644
No 24
>PLN02214 cinnamoyl-CoA reductase
Probab=100.00 E-value=3.3e-40 Score=319.56 Aligned_cols=301 Identities=20% Similarity=0.226 Sum_probs=228.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
.++|+|+||||+||||++|+++|+++|++|++++|+.+...... .........+++++.+|++|.+++.++++++ |
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d 83 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTH--LRELEGGKERLILCKADLQDYEALKAAIDGC--D 83 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHH--HHHhhCCCCcEEEEecCcCChHHHHHHHhcC--C
Confidence 45789999999999999999999999999999999754321110 0000001236889999999999999999976 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCC-cccCCCCC---CCCCCCCC-----CCCC
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSS-SVYGVNKK---VPFSEKDR-----TDQP 227 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~-~vyg~~~~---~~~~e~~~-----~~~~ 227 (424)
+|||+|+.. ..++...+++|+.|+.+++++|++.+++ +||++||. ++||.... .+++|+++ +..+
T Consensus 84 ~Vih~A~~~-----~~~~~~~~~~nv~gt~~ll~aa~~~~v~-r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p 157 (342)
T PLN02214 84 GVFHTASPV-----TDDPEQMVEPAVNGAKFVINAAAEAKVK-RVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNT 157 (342)
T ss_pred EEEEecCCC-----CCCHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEeccceeeeccCCCCCCcccCcccCCChhhcccc
Confidence 999999964 2456789999999999999999998875 99999996 68875332 24666642 2246
Q ss_pred CChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC--CcHHHHHHHHHcCCceeEEecCCCCccccccccHHH
Q 042406 228 ASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD--MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 305 (424)
.+.|+.||.++|.++..+.+++|++++++||++||||+.... .....++ .++.+.... + ++..++||||+|
T Consensus 158 ~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~-~~~~g~~~~-~-----~~~~~~~i~V~D 230 (342)
T PLN02214 158 KNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVL-KYLTGSAKT-Y-----ANLTQAYVDVRD 230 (342)
T ss_pred ccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHH-HHHcCCccc-C-----CCCCcCeeEHHH
Confidence 678999999999999999888899999999999999976432 1122233 344554432 2 245789999999
Q ss_pred HHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCc-ccccccccCCCCCCcccccCChHHH
Q 042406 306 IVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV-KAETKVLPLPRNGDVQFTHANISLA 384 (424)
Q Consensus 306 va~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~d~s~~ 384 (424)
+|++++.+++.+.. ++.||+++ ..+++.|+++.+.+.++. +.+....+ ..........+|++|+
T Consensus 231 va~a~~~al~~~~~-------------~g~yn~~~-~~~~~~el~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~k~ 295 (342)
T PLN02214 231 VALAHVLVYEAPSA-------------SGRYLLAE-SARHRGEVVEILAKLFPEYPLPTKCKD-EKNPRAKPYKFTNQKI 295 (342)
T ss_pred HHHHHHHHHhCccc-------------CCcEEEec-CCCCHHHHHHHHHHHCCCCCCCCCCcc-ccCCCCCccccCcHHH
Confidence 99999999986531 15799987 468999999999999863 22221111 1123344556899999
Q ss_pred HhHcCCcccCCHHHHHHHHHHHHHHHh
Q 042406 385 QRELGYMPTTDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 385 ~~~LG~~p~~~l~~~l~~~v~~~~~~~ 411 (424)
+ +|||+|. +++|+|+++++|+++..
T Consensus 296 ~-~LG~~p~-~lee~i~~~~~~~~~~~ 320 (342)
T PLN02214 296 K-DLGLEFT-STKQSLYDTVKSLQEKG 320 (342)
T ss_pred H-HcCCccc-CHHHHHHHHHHHHHHcC
Confidence 7 5999995 99999999999998754
No 25
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=100.00 E-value=1e-40 Score=317.32 Aligned_cols=281 Identities=17% Similarity=0.184 Sum_probs=228.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+||||++|+++|+++| +|++++|.. ..+.+|++|.+.+.+++++.+||+||
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~--------------------~~~~~Dl~d~~~~~~~~~~~~~D~Vi 59 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS--------------------TDYCGDFSNPEGVAETVRKIRPDVIV 59 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc--------------------ccccCCCCCHHHHHHHHHhcCCCEEE
Confidence 689999999999999999999999 799998732 12457999999999999987889999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
|+|+...+..++.+++..+.+|+.|+.+++++|++.+. ++||+||..|||.....|++|++++ .|.+.|+.||+++|
T Consensus 60 h~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~--~~v~~Ss~~Vy~~~~~~p~~E~~~~-~P~~~Yg~sK~~~E 136 (299)
T PRK09987 60 NAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA--WVVHYSTDYVFPGTGDIPWQETDAT-APLNVYGETKLAGE 136 (299)
T ss_pred ECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEccceEECCCCCCCcCCCCCC-CCCCHHHHHHHHHH
Confidence 99999877777778888999999999999999999884 7999999999997766788888866 78899999999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCC--CccccccccHHHHHHHHHHHhhhc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDG--ASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
.++..+. .+.+++||+++|||+.. .+...+++.+..++++.++ ++ +...+.+.+++|++.++..+++..
T Consensus 137 ~~~~~~~----~~~~ilR~~~vyGp~~~--~~~~~~~~~~~~~~~~~v~---~d~~g~~~~~~~~~d~~~~~~~~~~~~~ 207 (299)
T PRK09987 137 KALQEHC----AKHLIFRTSWVYAGKGN--NFAKTMLRLAKEREELSVI---NDQFGAPTGAELLADCTAHAIRVALNKP 207 (299)
T ss_pred HHHHHhC----CCEEEEecceecCCCCC--CHHHHHHHHHhcCCCeEEe---CCCcCCCCCHHHHHHHHHHHHHHhhccC
Confidence 9988763 46799999999999653 4566778878788888887 34 455566677788888888776543
Q ss_pred cccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhC---cccc---cccccC----CCCCCcccccCChHHHHhH
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILK---VKAE---TKVLPL----PRNGDVQFTHANISLAQRE 387 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g---~~~~---~~~~~~----~~~~~~~~~~~d~s~~~~~ 387 (424)
.. +++||+++++.+|+.|+++.+.+.++ .+.. +...+. .+..+..+..+|++|+++.
T Consensus 208 ~~-------------~giyni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~~~~~rp~~~~ld~~k~~~~ 274 (299)
T PRK09987 208 EV-------------AGLYHLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYPTPARRPHNSRLNTEKFQQN 274 (299)
T ss_pred CC-------------CCeEEeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcCCCCCCCCcccCCHHHHHHH
Confidence 21 16999999999999999999988643 3321 112211 1234556778999999999
Q ss_pred cCCcccCCHHHHHHHHHHHH
Q 042406 388 LGYMPTTDLETGLKKFVRWY 407 (424)
Q Consensus 388 LG~~p~~~l~~~l~~~v~~~ 407 (424)
|||+|. +|+++|+++++.+
T Consensus 275 lg~~~~-~~~~~l~~~~~~~ 293 (299)
T PRK09987 275 FALVLP-DWQVGVKRMLTEL 293 (299)
T ss_pred hCCCCc-cHHHHHHHHHHHH
Confidence 999986 9999999999865
No 26
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=100.00 E-value=3.7e-40 Score=314.90 Aligned_cols=291 Identities=22% Similarity=0.324 Sum_probs=233.4
Q ss_pred EEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEEcc
Q 042406 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLA 162 (424)
Q Consensus 83 lItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~~A 162 (424)
|||||+||||++|++.|+++|+.|+++.+. ..+|++|.+++.++++..++|+|||+|
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-----------------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A 57 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-----------------------KELDLTRQADVEAFFAKEKPTYVILAA 57 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc-----------------------ccCCCCCHHHHHHHHhccCCCEEEEee
Confidence 699999999999999999999988866431 147999999999999988889999999
Q ss_pred cccCc-hhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC---CCCCCC-hHHHHHHH
Q 042406 163 AQAGV-RYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR---TDQPAS-LYAATKKA 237 (424)
Q Consensus 163 g~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~---~~~~~~-~Y~~sK~~ 237 (424)
+.... .....++...+++|+.++.+++++|++.+++ +||++||+.+||.....+++|+++ +..|.+ .|+.||.+
T Consensus 58 ~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~ 136 (306)
T PLN02725 58 AKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVK-KLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEWYAIAKIA 136 (306)
T ss_pred eeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCC-eEEEeCceeecCCCCCCCCCHHHhccCCCCCCcchHHHHHHH
Confidence 97543 2234567788999999999999999999875 999999999999766677888762 223433 59999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCC----CCcHHHHHHH----HHcCCceeEEecCCCCccccccccHHHHHHH
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRP----DMAYFFFTRD----IIRGKRITVYEAPDGASVARDFTYIDDIVKG 309 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 309 (424)
+|.+++.+.+.++++++++||+.||||+... ...++.++.. ...+.++.+.. +++++.++|+|++|++++
T Consensus 137 ~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~g~~~~~~i~v~Dv~~~ 214 (306)
T PLN02725 137 GIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVW--GSGSPLREFLHVDDLADA 214 (306)
T ss_pred HHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEc--CCCCeeeccccHHHHHHH
Confidence 9999999988889999999999999997532 2334444433 34566655521 577889999999999999
Q ss_pred HHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcC
Q 042406 310 CLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELG 389 (424)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG 389 (424)
++.+++.... .+.||+++++.+|+.|+++.+.+.++.+..+...+ .+..+.....+|++|++ .||
T Consensus 215 ~~~~~~~~~~-------------~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~d~~k~~-~lg 279 (306)
T PLN02725 215 VVFLMRRYSG-------------AEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDT-SKPDGTPRKLMDSSKLR-SLG 279 (306)
T ss_pred HHHHHhcccc-------------CcceEeCCCCcccHHHHHHHHHHHhCCCCceeecC-CCCCcccccccCHHHHH-HhC
Confidence 9999876421 15789999999999999999999999766554332 22333445678999996 699
Q ss_pred CcccCCHHHHHHHHHHHHHHHhccC
Q 042406 390 YMPTTDLETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 390 ~~p~~~l~~~l~~~v~~~~~~~~~~ 414 (424)
|.|+++++++|+++++|+.++.++.
T Consensus 280 ~~p~~~~~~~l~~~~~~~~~~~~~~ 304 (306)
T PLN02725 280 WDPKFSLKDGLQETYKWYLENYETG 304 (306)
T ss_pred CCCCCCHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999887653
No 27
>PLN00198 anthocyanidin reductase; Provisional
Probab=100.00 E-value=2.5e-39 Score=313.51 Aligned_cols=309 Identities=18% Similarity=0.223 Sum_probs=224.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
..+|+||||||+||||++|+++|+++|++|++++|+.+....... .. ......+++++.+|++|.+++.++++++ |
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d 82 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LR-ALQELGDLKIFGADLTDEESFEAPIAGC--D 82 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HH-hcCCCCceEEEEcCCCChHHHHHHHhcC--C
Confidence 457899999999999999999999999999999887543221110 00 0011136889999999999999999865 9
Q ss_pred EEEEcccccCchhhccChH-HHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCC----CCCCCCCCC--------
Q 042406 157 HVMHLAAQAGVRYAMQNPN-SYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNK----KVPFSEKDR-------- 223 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~-~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~----~~~~~e~~~-------- 223 (424)
+|||+|+... ....++. ..+++|+.|+.++++++.+.+..++||++||+++||... ..+++|+.+
T Consensus 83 ~vih~A~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~ 160 (338)
T PLN00198 83 LVFHVATPVN--FASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTS 160 (338)
T ss_pred EEEEeCCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhh
Confidence 9999999643 1223333 567999999999999998864224999999999998532 234444321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC--CcHHHHHHHHHcCCceeEEecCC--CCccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD--MAYFFFTRDIIRGKRITVYEAPD--GASVARD 299 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 299 (424)
...|.+.|+.||.++|.+++.+++.++++++++||++||||+.... .... ++..++.++.+.+....+ ..+..++
T Consensus 161 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~ 239 (338)
T PLN00198 161 EKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLS-LAMSLITGNEFLINGLKGMQMLSGSIS 239 (338)
T ss_pred cCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHH-HHHHHHcCCccccccccccccccCCcc
Confidence 1246788999999999999999988899999999999999975432 1222 233556666655431000 0122479
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCc-ccccccccCCCCCCccccc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV-KAETKVLPLPRNGDVQFTH 378 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~ 378 (424)
|+||+|+|++++.+++..... +.|+ +++..+++.|+++.+.+.++. +.+....+.+ ......
T Consensus 240 ~i~V~D~a~a~~~~~~~~~~~-------------~~~~-~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~---~~~~~~ 302 (338)
T PLN00198 240 ITHVEDVCRAHIFLAEKESAS-------------GRYI-CCAANTSVPELAKFLIKRYPQYQVPTDFGDFP---SKAKLI 302 (338)
T ss_pred eeEHHHHHHHHHHHhhCcCcC-------------CcEE-EecCCCCHHHHHHHHHHHCCCCCCCccccccC---CCCccc
Confidence 999999999999998764311 4574 556779999999999998863 2222221111 123456
Q ss_pred CChHHHHhHcCCcccCCHHHHHHHHHHHHHHH
Q 042406 379 ANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 379 ~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~ 410 (424)
.|++|+++ +||+|+++++|+|+++++||+++
T Consensus 303 ~~~~k~~~-~G~~p~~~l~~gi~~~~~~~~~~ 333 (338)
T PLN00198 303 ISSEKLIS-EGFSFEYGIEEIYDQTVEYFKAK 333 (338)
T ss_pred cChHHHHh-CCceecCcHHHHHHHHHHHHHHc
Confidence 89999987 69999999999999999999864
No 28
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=100.00 E-value=1.6e-39 Score=310.88 Aligned_cols=291 Identities=22% Similarity=0.335 Sum_probs=218.1
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHH----HHHhhc---cC
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLL----DKIFNV---VA 154 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v----~~~~~~---~~ 154 (424)
||||||+||||++|+++|+++|++|+++.|+....... ..+..+|+.|.... .+++++ .+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 68 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------------VNLVDLDIADYMDKEDFLAQIMAGDDFGD 68 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-------------HhhhhhhhhhhhhHHHHHHHHhcccccCC
Confidence 79999999999999999999999777665543221100 01223455554332 333332 15
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
+|+|||+||..... ..+++..++.|+.++.+++++|++.+. +||++||+++||.....+..|+.+. .|.+.|+.|
T Consensus 69 ~d~Vih~A~~~~~~--~~~~~~~~~~n~~~t~~ll~~~~~~~~--~~i~~SS~~vyg~~~~~~~~E~~~~-~p~~~Y~~s 143 (308)
T PRK11150 69 IEAIFHEGACSSTT--EWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGRTDDFIEEREYE-KPLNVYGYS 143 (308)
T ss_pred ccEEEECceecCCc--CCChHHHHHHHHHHHHHHHHHHHHcCC--cEEEEcchHHhCcCCCCCCccCCCC-CCCCHHHHH
Confidence 79999999864432 234566899999999999999999875 6999999999997554455555543 778999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCC----cHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHH
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDM----AYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
|.++|++++.++...+++++++||++||||+..... ....+...+..+....++. ++++..++|+|++|+|+++
T Consensus 144 K~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--g~~~~~r~~i~v~D~a~a~ 221 (308)
T PRK11150 144 KFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFE--GSENFKRDFVYVGDVAAVN 221 (308)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEec--CCCceeeeeeeHHHHHHHH
Confidence 999999999998888999999999999999865432 2334556777777665653 4567789999999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCC---CCcccccCChHHHHhH
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN---GDVQFTHANISLAQRE 387 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~d~s~~~~~ 387 (424)
+.+++... +++||+++++.+|+.|+++.+.+.++.. .....+.+.. ........|++|+++
T Consensus 222 ~~~~~~~~--------------~~~yni~~~~~~s~~el~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~- 285 (308)
T PRK11150 222 LWFWENGV--------------SGIFNCGTGRAESFQAVADAVLAYHKKG-EIEYIPFPDKLKGRYQAFTQADLTKLRA- 285 (308)
T ss_pred HHHHhcCC--------------CCeEEcCCCCceeHHHHHHHHHHHhCCC-cceeccCccccccccceecccCHHHHHh-
Confidence 98887532 1699999999999999999999999853 2222232221 112345689999985
Q ss_pred cCCccc-CCHHHHHHHHHHHHH
Q 042406 388 LGYMPT-TDLETGLKKFVRWYL 408 (424)
Q Consensus 388 LG~~p~-~~l~~~l~~~v~~~~ 408 (424)
+||+|+ .+++++|+++++|+.
T Consensus 286 ~g~~p~~~~~~~gl~~~~~~~~ 307 (308)
T PRK11150 286 AGYDKPFKTVAEGVAEYMAWLN 307 (308)
T ss_pred cCCCCCCCCHHHHHHHHHHHhh
Confidence 799987 599999999999975
No 29
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=2.8e-39 Score=315.01 Aligned_cols=314 Identities=19% Similarity=0.217 Sum_probs=224.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
+.+++|+||||||+||||++++++|+++|++|++++|+....... ........+++++.+|++|.+.+.++++++
T Consensus 6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~- 80 (353)
T PLN02896 6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHL----LSKWKEGDRLRLFRADLQEEGSFDEAVKGC- 80 (353)
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHH----HHhhccCCeEEEEECCCCCHHHHHHHHcCC-
Confidence 356789999999999999999999999999999999864322111 111112346889999999999999999865
Q ss_pred ccEEEEcccccCchh--hccChHH-----HHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCC-----CCCCCCC
Q 042406 155 FTHVMHLAAQAGVRY--AMQNPNS-----YVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKK-----VPFSEKD 222 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~--~~~~~~~-----~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~-----~~~~e~~ 222 (424)
|+|||+|+...... ...+++. .+++|+.|+.+++++|.+.+..++||++||.++||.... .+++|+.
T Consensus 81 -d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~ 159 (353)
T PLN02896 81 -DGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETC 159 (353)
T ss_pred -CEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCccc
Confidence 99999999865432 2234443 445567999999999988752349999999999985321 3455542
Q ss_pred CC--------CCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHH---cCCcee--EEe
Q 042406 223 RT--------DQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDII---RGKRIT--VYE 289 (424)
Q Consensus 223 ~~--------~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~---~~~~~~--~~~ 289 (424)
+. ..+.+.|+.||.++|.++..+.+.++++++++||++||||+.... ++.++..++ .+.... .+.
T Consensus 160 ~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~--~~~~~~~~~~~~~g~~~~~~~~~ 237 (353)
T PLN02896 160 QTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPS--VPSSIQVLLSPITGDSKLFSILS 237 (353)
T ss_pred CCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCC--CCchHHHHHHHhcCCcccccccc
Confidence 11 124458999999999999999988899999999999999976432 122233222 343221 110
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcc-cccccccC
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK-AETKVLPL 368 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~ 368 (424)
........++|||++|+|++++.+++.+.. ++.|++ ++.++++.|+++.+.+.++.. ......+
T Consensus 238 ~~~~~~~~~dfi~v~Dva~a~~~~l~~~~~-------------~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~- 302 (353)
T PLN02896 238 AVNSRMGSIALVHIEDICDAHIFLMEQTKA-------------EGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDE- 302 (353)
T ss_pred ccccccCceeEEeHHHHHHHHHHHHhCCCc-------------CccEEe-cCCCCCHHHHHHHHHHhCCCCCccccccc-
Confidence 000111246999999999999999975321 146765 567799999999999999743 2222222
Q ss_pred CCCCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 369 PRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 369 ~~~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
+...+.. ...|.++++ +|||+|+++++++|+++++|++++...
T Consensus 303 ~~~~~~~-~~~~~~~~~-~lGw~p~~~l~~~i~~~~~~~~~~~~~ 345 (353)
T PLN02896 303 EKRGSIP-SEISSKKLR-DLGFEYKYGIEEIIDQTIDCCVDHGFL 345 (353)
T ss_pred cccCccc-cccCHHHHH-HcCCCccCCHHHHHHHHHHHHHHCCCC
Confidence 2222323 356888886 599999999999999999999998774
No 30
>PLN02650 dihydroflavonol-4-reductase
Probab=100.00 E-value=5.5e-39 Score=312.75 Aligned_cols=309 Identities=18% Similarity=0.253 Sum_probs=223.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
.+.|+||||||+||||++|+++|+++|++|++++|+.+........... .....+++++.+|++|.+.+.++++++ |
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~v~~Dl~d~~~~~~~~~~~--d 79 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDL-PGATTRLTLWKADLAVEGSFDDAIRGC--T 79 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhc-cCCCCceEEEEecCCChhhHHHHHhCC--C
Confidence 3567899999999999999999999999999999965433221111100 001135889999999999999999866 9
Q ss_pred EEEEcccccCchhhccCh-HHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCC-CCC-CCCCCCC--------C
Q 042406 157 HVMHLAAQAGVRYAMQNP-NSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNK-KVP-FSEKDRT--------D 225 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~-~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~-~~~-~~e~~~~--------~ 225 (424)
+|||+|+.... ...++ ...+++|+.|+.+++++|++.+..++||++||.++|+... ..+ ++|+.+. .
T Consensus 80 ~ViH~A~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~ 157 (351)
T PLN02650 80 GVFHVATPMDF--ESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKK 157 (351)
T ss_pred EEEEeCCCCCC--CCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccc
Confidence 99999987532 22233 4789999999999999999876334999999998776432 223 4554321 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHH--HcCCceeEEecCCCCccccccccH
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDI--IRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
.+.+.|+.||.++|.+++.+.+++|++++++||++||||+..... ...++..+ ..+.... + + ....++|+|+
T Consensus 158 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~-~~~~~~~~~~~~~~~~~-~---~-~~~~r~~v~V 231 (351)
T PLN02650 158 MTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSM-PPSLITALSLITGNEAH-Y---S-IIKQGQFVHL 231 (351)
T ss_pred cccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCC-CccHHHHHHHhcCCccc-c---C-cCCCcceeeH
Confidence 244689999999999999999889999999999999999764321 12222222 2333221 1 1 1234799999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcc-cccccccCCCCCCcccccCChH
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK-AETKVLPLPRNGDVQFTHANIS 382 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~d~s 382 (424)
+|+|++++.+++.+.. ++.| ++++..+|+.|+++++.+.++.. .+.. .+ ....+......|++
T Consensus 232 ~Dva~a~~~~l~~~~~-------------~~~~-i~~~~~~s~~el~~~i~~~~~~~~~~~~-~~-~~~~~~~~~~~d~~ 295 (351)
T PLN02650 232 DDLCNAHIFLFEHPAA-------------EGRY-ICSSHDATIHDLAKMLREKYPEYNIPAR-FP-GIDEDLKSVEFSSK 295 (351)
T ss_pred HHHHHHHHHHhcCcCc-------------CceE-EecCCCcCHHHHHHHHHHhCcccCCCCC-CC-CcCcccccccCChH
Confidence 9999999999986431 1468 55667799999999999988632 1111 11 12234445567888
Q ss_pred HHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 383 LAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 383 ~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
++ ++|||+|+++++++|+++++|+++....
T Consensus 296 k~-~~lG~~p~~~l~egl~~~i~~~~~~~~~ 325 (351)
T PLN02650 296 KL-TDLGFTFKYSLEDMFDGAIETCREKGLI 325 (351)
T ss_pred HH-HHhCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 87 5799999999999999999999875543
No 31
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=7.9e-39 Score=308.02 Aligned_cols=302 Identities=19% Similarity=0.225 Sum_probs=225.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++|+||||||+||||++|+++|+++|++|++++|+......... .........+++++.+|++|.+.+.++++++ |+
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--d~ 79 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEH-LLALDGAKERLHLFKANLLEEGSFDSVVDGC--EG 79 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHH-HHhccCCCCceEEEeccccCcchHHHHHcCC--CE
Confidence 46899999999999999999999999999999997543221111 1100011247899999999999999999976 99
Q ss_pred EEEcccccCchhhccChH-HHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCc--ccCCC---CCCCCCCCCCCCCC---
Q 042406 158 VMHLAAQAGVRYAMQNPN-SYVESNIAGFVNLLETCKSS-DPQPAIVWASSSS--VYGVN---KKVPFSEKDRTDQP--- 227 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~-~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~--vyg~~---~~~~~~e~~~~~~~--- 227 (424)
|||+|+.... ...++. ..+++|+.|+.+++++|.+. +++ +||++||.+ +|+.. ...+++|+.+. .|
T Consensus 80 Vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~-~p~~~ 155 (322)
T PLN02662 80 VFHTASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAKVPSVK-RVVVTSSMAAVAYNGKPLTPDVVVDETWFS-DPAFC 155 (322)
T ss_pred EEEeCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHhCCCCC-EEEEccCHHHhcCCCcCCCCCCcCCcccCC-ChhHh
Confidence 9999997532 233443 78999999999999999887 665 999999976 46532 12345665443 22
Q ss_pred ---CChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC-CcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 228 ---ASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD-MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 228 ---~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
.+.|+.+|.++|.+++.+.++++++++++||+++|||+..+. .....++..++.+... + +++.++|+|+
T Consensus 156 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~i~v 228 (322)
T PLN02662 156 EESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT--F-----PNASYRWVDV 228 (322)
T ss_pred hcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc--C-----CCCCcCeEEH
Confidence 358999999999999999888899999999999999975432 2333445555555431 1 2457899999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHH
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISL 383 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~ 383 (424)
+|+|++++.+++.+... +.||++ +..+++.|+++.+.+.++... ......+...+.....+|++|
T Consensus 229 ~Dva~a~~~~~~~~~~~-------------~~~~~~-g~~~s~~e~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~d~~k 293 (322)
T PLN02662 229 RDVANAHIQAFEIPSAS-------------GRYCLV-ERVVHYSEVVKILHELYPTLQ-LPEKCADDKPYVPTYQVSKEK 293 (322)
T ss_pred HHHHHHHHHHhcCcCcC-------------CcEEEe-CCCCCHHHHHHHHHHHCCCCC-CCCCCCCccccccccccChHH
Confidence 99999999999865321 468887 467999999999999987421 111111112244556799999
Q ss_pred HHhHcCCcccCCHHHHHHHHHHHHHHH
Q 042406 384 AQRELGYMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~~~~~~ 410 (424)
+++ |||.+ ++++++|+++++||+++
T Consensus 294 ~~~-lg~~~-~~~~~~l~~~~~~~~~~ 318 (322)
T PLN02662 294 AKS-LGIEF-IPLEVSLKDTVESLKEK 318 (322)
T ss_pred HHH-hCCcc-ccHHHHHHHHHHHHHHc
Confidence 985 99997 49999999999999864
No 32
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-38 Score=303.61 Aligned_cols=302 Identities=33% Similarity=0.560 Sum_probs=246.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+||||++|+++|+++|++|++++|......... .++.++.+|+.|.+.+.+.++..+ |+||
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~-d~vi 69 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL----------SGVEFVVLDLTDRDLVDELAKGVP-DAVI 69 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc----------cccceeeecccchHHHHHHHhcCC-CEEE
Confidence 35999999999999999999999999999999654322111 467899999999988888888665 9999
Q ss_pred EcccccCchhhcc-ChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCC-CCCCCCCC-CCCCCCCChHHHHHH
Q 042406 160 HLAAQAGVRYAMQ-NPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVN-KKVPFSEK-DRTDQPASLYAATKK 236 (424)
Q Consensus 160 ~~Ag~~~~~~~~~-~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~-~~~~~~e~-~~~~~~~~~Y~~sK~ 236 (424)
|+|+......... ++...+.+|+.|+.+++++|++.+++ +|||.||.++|+.. ...+++|+ .+. .|.+.|+.||.
T Consensus 70 h~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~-~~v~~ss~~~~~~~~~~~~~~E~~~~~-~p~~~Yg~sK~ 147 (314)
T COG0451 70 HLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVK-RFVFASSVSVVYGDPPPLPIDEDLGPP-RPLNPYGVSKL 147 (314)
T ss_pred EccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeCCCceECCCCCCCCcccccCCC-CCCCHHHHHHH
Confidence 9999876544333 45679999999999999999997775 99999988888754 33366776 344 66669999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC---CcHHHHHHHHHcCCc-eeEEecCCCCccccccccHHHHHHHHHH
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD---MAYFFFTRDIIRGKR-ITVYEAPDGASVARDFTYIDDIVKGCLA 312 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 312 (424)
++|..+..+....+++++++||++||||+.... .+...++..+..+.+ .... +++...++++|++|++++++.
T Consensus 148 ~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~ 224 (314)
T COG0451 148 AAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIG---GDGSQTRDFVYVDDVADALLL 224 (314)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEe---CCCceeEeeEeHHHHHHHHHH
Confidence 999999999987799999999999999987765 455556666777877 3443 567888999999999999999
Q ss_pred HhhhccccCCCCCCCCCCCCcceEEcCCCC-cccHHHHHHHHHHHhCcccc-cccccC-CCCCCcccccCChHHHHhHcC
Q 042406 313 GLDTAKKSTGSGGKKKGPAEFRIFNLGNTT-PVPVSRLVSLLEKILKVKAE-TKVLPL-PRNGDVQFTHANISLAQRELG 389 (424)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~-~~~~~~-~~~~~~~~~~~d~s~~~~~LG 389 (424)
+++++.. ..||++++. .+++.|+++.+.+.+|.+.. +...+. ...........|.++++..||
T Consensus 225 ~~~~~~~--------------~~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg 290 (314)
T COG0451 225 ALENPDG--------------GVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPLGRRGDLREGKLLDISKARAALG 290 (314)
T ss_pred HHhCCCC--------------cEEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCCCCCCcccccccCCHHHHHHHhC
Confidence 9998752 289999987 89999999999999998866 333332 233344456789999999999
Q ss_pred CcccCCHHHHHHHHHHHHHHHh
Q 042406 390 YMPTTDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 390 ~~p~~~l~~~l~~~v~~~~~~~ 411 (424)
|.|.+++++++.++++|+....
T Consensus 291 ~~p~~~~~~~i~~~~~~~~~~~ 312 (314)
T COG0451 291 WEPKVSLEEGLADTLEWLLKKL 312 (314)
T ss_pred CCCCCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999998764
No 33
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=100.00 E-value=1.6e-38 Score=305.92 Aligned_cols=302 Identities=17% Similarity=0.228 Sum_probs=224.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
..+|+|+||||+||||++++++|+++|++|+++.|+.+............ ....+++++.+|++|.+++.++++++ |
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~--d 79 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALD-GAKERLKLFKADLLEESSFEQAIEGC--D 79 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhcc-CCCCceEEEecCCCCcchHHHHHhCC--C
Confidence 35789999999999999999999999999999998765432211111100 11246899999999999999999976 9
Q ss_pred EEEEcccccCchhhccCh-HHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCccc--CCC---CCCCCCCCCCCC----
Q 042406 157 HVMHLAAQAGVRYAMQNP-NSYVESNIAGFVNLLETCKSS-DPQPAIVWASSSSVY--GVN---KKVPFSEKDRTD---- 225 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~-~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~vy--g~~---~~~~~~e~~~~~---- 225 (424)
+|||+|+.... ...++ ...+++|+.|+.+++++|++. +++ +||++||.++| +.. ...+++|+++..
T Consensus 80 ~vih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~-rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~ 156 (322)
T PLN02986 80 AVFHTASPVFF--TVKDPQTELIDPALKGTINVLNTCKETPSVK-RVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLC 156 (322)
T ss_pred EEEEeCCCcCC--CCCCchhhhhHHHHHHHHHHHHHHHhcCCcc-EEEEecchhheecCCccCCCCCCcCcccCCChHHh
Confidence 99999997432 22333 357899999999999999986 554 99999998764 322 123456655431
Q ss_pred -CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC-CcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 226 -QPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD-MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 226 -~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
.+.+.|+.||.++|.+++++.++++++++++||++||||...+. .....++..+..+.+. + +.+.++|||+
T Consensus 157 ~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~--~-----~~~~~~~v~v 229 (322)
T PLN02986 157 RETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNL--F-----NNRFYRFVDV 229 (322)
T ss_pred hccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCC--C-----CCcCcceeEH
Confidence 23578999999999999999988899999999999999976432 2233455566666543 2 2456899999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCccc--ccCCh
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQF--THANI 381 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~--~~~d~ 381 (424)
+|+|++++.+++.+.. ++.||++ ++.+|+.|+++++.+.++. ..+... ....+... ...|.
T Consensus 230 ~Dva~a~~~al~~~~~-------------~~~yni~-~~~~s~~e~~~~i~~~~~~-~~~~~~--~~~~~~~~~~~~~d~ 292 (322)
T PLN02986 230 RDVALAHIKALETPSA-------------NGRYIID-GPIMSVNDIIDILRELFPD-LCIADT--NEESEMNEMICKVCV 292 (322)
T ss_pred HHHHHHHHHHhcCccc-------------CCcEEEe-cCCCCHHHHHHHHHHHCCC-CCCCCC--CccccccccCCccCH
Confidence 9999999999987542 1579995 5679999999999999873 221111 11222222 24788
Q ss_pred HHHHhHcCCcccCCHHHHHHHHHHHHHHH
Q 042406 382 SLAQRELGYMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 382 s~~~~~LG~~p~~~l~~~l~~~v~~~~~~ 410 (424)
+|++ +|||+|+ +++|+|+++++|+++.
T Consensus 293 ~~~~-~lg~~~~-~l~e~~~~~~~~~~~~ 319 (322)
T PLN02986 293 EKVK-NLGVEFT-PMKSSLRDTILSLKEK 319 (322)
T ss_pred HHHH-HcCCccc-CHHHHHHHHHHHHHHc
Confidence 9885 5999997 9999999999999873
No 34
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=100.00 E-value=2.2e-38 Score=305.22 Aligned_cols=313 Identities=28% Similarity=0.447 Sum_probs=242.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMH 160 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~ 160 (424)
+||||||+|+||++++++|+++|++|++++|............ ....+++++.+|+.|.+++.++++..++|+|||
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~ 76 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRG----ERITRVTFVEGDLRDRELLDRLFEEHKIDAVIH 76 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhh----ccccceEEEECCCCCHHHHHHHHHhCCCcEEEE
Confidence 4899999999999999999999999999876443211111100 011267889999999999999998767899999
Q ss_pred cccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 042406 161 LAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEA 240 (424)
Q Consensus 161 ~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~ 240 (424)
|||.........++...+..|+.++.+++++|.+.+.+ +||++||.++|+.....+++|+++. .|.+.|+.+|.++|.
T Consensus 77 ~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~ss~~~~g~~~~~~~~e~~~~-~~~~~y~~sK~~~e~ 154 (328)
T TIGR01179 77 FAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVK-KFIFSSSAAVYGEPSSIPISEDSPL-GPINPYGRSKLMSER 154 (328)
T ss_pred CccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCC-EEEEecchhhcCCCCCCCccccCCC-CCCCchHHHHHHHHH
Confidence 99986544444566788999999999999999998875 9999999999987665677777765 577899999999999
Q ss_pred HHHHHHHH-hCCcEEEEEeccccCCCCCC---------CCcHHHHHHHHH-cCCceeEEec---CCCCccccccccHHHH
Q 042406 241 IAHAYNHI-YGLSITGLRFFTVYGPWGRP---------DMAYFFFTRDII-RGKRITVYEA---PDGASVARDFTYIDDI 306 (424)
Q Consensus 241 ~~~~~~~~-~~i~~~~vrp~~v~G~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~i~v~Dv 306 (424)
+++.++++ .+++++++||+.+|||.... ..++..+..... ...++.++.. .+.++..++|||++|+
T Consensus 155 ~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~ 234 (328)
T TIGR01179 155 ILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDL 234 (328)
T ss_pred HHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHH
Confidence 99999877 69999999999999985321 122333444433 2344444321 1246778999999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHh
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQR 386 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~ 386 (424)
+++++.++...... ..+++||+++++++|+.|+++.+.+.+|.+.++...+. ...+......|++++++
T Consensus 235 a~~~~~~~~~~~~~----------~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 303 (328)
T TIGR01179 235 ADAHLAALEYLLNG----------GESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPR-RPGDPASLVADASKIRR 303 (328)
T ss_pred HHHHHHHHhhhhcC----------CCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCC-CCccccchhcchHHHHH
Confidence 99999998764321 12379999999999999999999999998776654432 23333445679999999
Q ss_pred HcCCcccCC-HHHHHHHHHHHHHHH
Q 042406 387 ELGYMPTTD-LETGLKKFVRWYLSY 410 (424)
Q Consensus 387 ~LG~~p~~~-l~~~l~~~v~~~~~~ 410 (424)
+|||+|.++ ++++|+++++|+++|
T Consensus 304 ~lg~~p~~~~l~~~~~~~~~~~~~~ 328 (328)
T TIGR01179 304 ELGWQPKYTDLEIIIKTAWRWESRN 328 (328)
T ss_pred HhCCCCCcchHHHHHHHHHHHHhcC
Confidence 999999987 999999999999864
No 35
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=100.00 E-value=2.9e-38 Score=302.95 Aligned_cols=298 Identities=27% Similarity=0.420 Sum_probs=233.6
Q ss_pred EEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc--cCccEE
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV--VAFTHV 158 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~--~~~d~v 158 (424)
||||||+||||+++++.|+++|+ .|++++|..... ... . .....+..|+.+.+.++.+.+. .++|+|
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-----~~~--~---~~~~~~~~d~~~~~~~~~~~~~~~~~~D~v 70 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-----KFL--N---LADLVIADYIDKEDFLDRLEKGAFGKIEAI 70 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-----hhh--h---hhheeeeccCcchhHHHHHHhhccCCCCEE
Confidence 69999999999999999999997 788888754311 000 0 0113567889888888777652 367999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||+|+.... ...+++..+++|+.++.+++++|++.+. +||++||.++|+... .++.|++++..|.+.|+.+|.++
T Consensus 71 vh~A~~~~~--~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~v~~SS~~vy~~~~-~~~~e~~~~~~p~~~Y~~sK~~~ 145 (314)
T TIGR02197 71 FHQGACSDT--TETDGEYMMENNYQYSKRLLDWCAEKGI--PFIYASSAATYGDGE-AGFREGRELERPLNVYGYSKFLF 145 (314)
T ss_pred EECccccCc--cccchHHHHHHHHHHHHHHHHHHHHhCC--cEEEEccHHhcCCCC-CCcccccCcCCCCCHHHHHHHHH
Confidence 999997542 3456778999999999999999998874 799999999998653 45667765546788999999999
Q ss_pred HHHHHHHHH--HhCCcEEEEEeccccCCCCCCC----CcHHHHHHHHHcCCceeEEec---CCCCccccccccHHHHHHH
Q 042406 239 EAIAHAYNH--IYGLSITGLRFFTVYGPWGRPD----MAYFFFTRDIIRGKRITVYEA---PDGASVARDFTYIDDIVKG 309 (424)
Q Consensus 239 e~~~~~~~~--~~~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~Dva~a 309 (424)
|.+++++.. ..+++++++||+.||||+.... ..+..++..+..+.++.++.. .+++++.++|+|++|++++
T Consensus 146 e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~ 225 (314)
T TIGR02197 146 DQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDV 225 (314)
T ss_pred HHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHH
Confidence 999987532 2368999999999999986432 334566777788887776531 2467888999999999999
Q ss_pred HHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCC---CCcccccCChHHHHh
Q 042406 310 CLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN---GDVQFTHANISLAQR 386 (424)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~d~s~~~~ 386 (424)
++.++.. .. +++||+++++++|+.|+++.+.+.+|.+..+...+.|.. ........|++|+++
T Consensus 226 i~~~~~~-~~-------------~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 291 (314)
T TIGR02197 226 NLWLLEN-GV-------------SGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALRGKYQYFTQADITKLRA 291 (314)
T ss_pred HHHHHhc-cc-------------CceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccccccccccccchHHHHH
Confidence 9999986 21 169999999999999999999999997765554444432 122345689999999
Q ss_pred HcCCcccCCHHHHHHHHHHHHH
Q 042406 387 ELGYMPTTDLETGLKKFVRWYL 408 (424)
Q Consensus 387 ~LG~~p~~~l~~~l~~~v~~~~ 408 (424)
.|||.|+++++|+++++++|++
T Consensus 292 ~l~~~p~~~l~~~l~~~~~~~~ 313 (314)
T TIGR02197 292 AGYYGPFTTLEEGVKDYVQWLL 313 (314)
T ss_pred hcCCCCcccHHHHHHHHHHHHh
Confidence 9999999999999999999985
No 36
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=100.00 E-value=2.6e-37 Score=292.69 Aligned_cols=276 Identities=21% Similarity=0.254 Sum_probs=225.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMH 160 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~ 160 (424)
+||||||+||||++++++|+++|++|++++|. .+|+.|.+++.+++++.++|+|||
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~------------------------~~d~~~~~~~~~~~~~~~~d~vi~ 56 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS------------------------QLDLTDPEALERLLRAIRPDAVVN 56 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc------------------------ccCCCCHHHHHHHHHhCCCCEEEE
Confidence 48999999999999999999999999999882 479999999999999888999999
Q ss_pred cccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHH
Q 042406 161 LAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEA 240 (424)
Q Consensus 161 ~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~ 240 (424)
+|+.........+++..+++|+.++.+++++|++.+. +||++||.++|+.....+++|+++. .|.+.|+.+|.++|.
T Consensus 57 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~Ss~~vy~~~~~~~~~E~~~~-~~~~~Y~~~K~~~E~ 133 (287)
T TIGR01214 57 TAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA--RLVHISTDYVFDGEGKRPYREDDAT-NPLNVYGQSKLAGEQ 133 (287)
T ss_pred CCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEeeeeeecCCCCCCCCCCCCC-CCcchhhHHHHHHHH
Confidence 9997654444456678899999999999999998873 8999999999987666788888766 678899999999999
Q ss_pred HHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcccc
Q 042406 241 IAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKS 320 (424)
Q Consensus 241 ~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~ 320 (424)
+++.+ +.+++++||++||||+.. ..+...++..+..+.++.+. ++..++++|++|+|++++.+++....
T Consensus 134 ~~~~~----~~~~~ilR~~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~v~Dva~a~~~~~~~~~~- 202 (287)
T TIGR01214 134 AIRAA----GPNALIVRTSWLYGGGGG-RNFVRTMLRLAGRGEELRVV-----DDQIGSPTYAKDLARVIAALLQRLAR- 202 (287)
T ss_pred HHHHh----CCCeEEEEeeecccCCCC-CCHHHHHHHHhhcCCCceEe-----cCCCcCCcCHHHHHHHHHHHHhhccC-
Confidence 88876 789999999999999753 33455667777777777664 24678999999999999999976521
Q ss_pred CCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccccc------cc---CC-CCCCcccccCChHHHHhHcCC
Q 042406 321 TGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKV------LP---LP-RNGDVQFTHANISLAQRELGY 390 (424)
Q Consensus 321 ~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~------~~---~~-~~~~~~~~~~d~s~~~~~LG~ 390 (424)
.+++||+++++.+|+.|+++.+.+.+|.+..... .. .+ .........+|++|++++|||
T Consensus 203 -----------~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~lg~ 271 (287)
T TIGR01214 203 -----------ARGVYHLANSGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYPRPARRPAYSVLDNTKLVKTLGT 271 (287)
T ss_pred -----------CCCeEEEECCCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcCCCCCCCCccccchHHHHHHcCC
Confidence 1279999999999999999999999997653111 00 01 112234467999999999999
Q ss_pred cccCCHHHHHHHHHHH
Q 042406 391 MPTTDLETGLKKFVRW 406 (424)
Q Consensus 391 ~p~~~l~~~l~~~v~~ 406 (424)
.+ ++++++|.++++.
T Consensus 272 ~~-~~~~~~l~~~~~~ 286 (287)
T TIGR01214 272 PL-PHWREALRAYLQE 286 (287)
T ss_pred CC-ccHHHHHHHHHhh
Confidence 44 5999999988753
No 37
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=100.00 E-value=6e-38 Score=295.53 Aligned_cols=280 Identities=26% Similarity=0.389 Sum_probs=216.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+|+||++|++.|.++|++|+.+.|. ..|+.|.+++.++++..+||+||
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~------------------------~~dl~d~~~~~~~~~~~~pd~Vi 56 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRS------------------------DLDLTDPEAVAKLLEAFKPDVVI 56 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT------------------------CS-TTSHHHHHHHHHHH--SEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch------------------------hcCCCCHHHHHHHHHHhCCCeEe
Confidence 789999999999999999999999999999872 57999999999999999999999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
||||...+..++.+++..+.+|+.++.+|+++|.+.+. ++||+||..||+.....|+.|++++ .|.+.||.+|+++|
T Consensus 57 n~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~--~li~~STd~VFdG~~~~~y~E~d~~-~P~~~YG~~K~~~E 133 (286)
T PF04321_consen 57 NCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA--RLIHISTDYVFDGDKGGPYTEDDPP-NPLNVYGRSKLEGE 133 (286)
T ss_dssp E------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SSTSSSB-TTS-----SSHHHHHHHHHH
T ss_pred ccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC--cEEEeeccEEEcCCcccccccCCCC-CCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999986 8999999999988878889999987 89999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
..+++.. -+..|+|++.+||+. ...++..++..+..++.+.++ .+..++.+|++|+|++++.++++...
T Consensus 134 ~~v~~~~----~~~~IlR~~~~~g~~--~~~~~~~~~~~~~~~~~i~~~-----~d~~~~p~~~~dlA~~i~~l~~~~~~ 202 (286)
T PF04321_consen 134 QAVRAAC----PNALILRTSWVYGPS--GRNFLRWLLRRLRQGEPIKLF-----DDQYRSPTYVDDLARVILELIEKNLS 202 (286)
T ss_dssp HHHHHH-----SSEEEEEE-SEESSS--SSSHHHHHHHHHHCTSEEEEE-----SSCEE--EEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhc----CCEEEEecceecccC--CCchhhhHHHHHhcCCeeEee-----CCceeCCEEHHHHHHHHHHHHHhccc
Confidence 9998853 278999999999993 345777888899999999986 47789999999999999999998764
Q ss_pred cCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccc-ccccccCCC----CCCcccccCChHHHHhHcCCcccC
Q 042406 320 STGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA-ETKVLPLPR----NGDVQFTHANISLAQRELGYMPTT 394 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~-~~~~~~~~~----~~~~~~~~~d~s~~~~~LG~~p~~ 394 (424)
.. ..+++||+++++.+|..|+++.+.+.+|.+. .+...+... ........+|++|+++.||.++.
T Consensus 203 ~~---------~~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~~~~rp~~~~L~~~kl~~~~g~~~~- 272 (286)
T PF04321_consen 203 GA---------SPWGIYHLSGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPRAAPRPRNTSLDCRKLKNLLGIKPP- 272 (286)
T ss_dssp -G---------GG-EEEE---BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTTSSGS-SBE-B--HHHHHCTTS----
T ss_pred cc---------ccceeEEEecCcccCHHHHHHHHHHHhCCCCceEEecccccCCCCCCCCCcccccHHHHHHccCCCCc-
Confidence 11 1237999999999999999999999999877 333222111 12334567999999999999988
Q ss_pred CHHHHHHHHHHHH
Q 042406 395 DLETGLKKFVRWY 407 (424)
Q Consensus 395 ~l~~~l~~~v~~~ 407 (424)
+++++|+++++.|
T Consensus 273 ~~~~~l~~~~~~~ 285 (286)
T PF04321_consen 273 PWREGLEELVKQY 285 (286)
T ss_dssp BHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 8999999999876
No 38
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=100.00 E-value=1.1e-36 Score=293.69 Aligned_cols=296 Identities=25% Similarity=0.309 Sum_probs=229.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|+||||+||||+++++.|+++|++|++++|+.+... .....+++++.+|+.|.+++.++++++ |+||
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~~D~~~~~~l~~~~~~~--d~vi 69 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR---------NLEGLDVEIVEGDLRDPASLRKAVAGC--RALF 69 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccc---------ccccCCceEEEeeCCCHHHHHHHHhCC--CEEE
Confidence 57999999999999999999999999999999654211 112236889999999999999999876 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC-CCCCCCCCCCCCCC--CCChHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV-NKKVPFSEKDRTDQ--PASLYAATKK 236 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~-~~~~~~~e~~~~~~--~~~~Y~~sK~ 236 (424)
|+|+... ....+++..+++|+.++.++++++++.+++ +||++||.++|+. ....+++|+.+... ..+.|+.+|.
T Consensus 70 ~~a~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~ 146 (328)
T TIGR03466 70 HVAADYR--LWAPDPEEMYAANVEGTRNLLRAALEAGVE-RVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKF 146 (328)
T ss_pred Eeceecc--cCCCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHH
Confidence 9998642 234567889999999999999999998875 9999999999985 34456777665421 2468999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhh
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
++|.+++++..+++++++++||+++|||+.........++...+.+.. +.+. +...+|+|++|+|++++.+++.
T Consensus 147 ~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~i~v~D~a~a~~~~~~~ 220 (328)
T TIGR03466 147 LAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKM-PAYV-----DTGLNLVHVDDVAEGHLLALER 220 (328)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCC-ceee-----CCCcceEEHHHHHHHHHHHHhC
Confidence 999999999888899999999999999976533333334444444432 2221 2336899999999999999876
Q ss_pred ccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCC---------------CCC--------
Q 042406 317 AKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR---------------NGD-------- 373 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~---------------~~~-------- 373 (424)
.. .++.|+++ ++.+++.|+++.+.+.+|.+......|... ...
T Consensus 221 ~~-------------~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (328)
T TIGR03466 221 GR-------------IGERYILG-GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGV 286 (328)
T ss_pred CC-------------CCceEEec-CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHH
Confidence 42 12678886 678999999999999999765443322110 000
Q ss_pred ---cccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHH
Q 042406 374 ---VQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 374 ---~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~ 410 (424)
.....+|++|+++.|||.|. +++++|+++++||+++
T Consensus 287 ~~~~~~~~~d~~k~~~~lg~~p~-~~~~~i~~~~~~~~~~ 325 (328)
T TIGR03466 287 RMAKKKMFFSSAKAVRELGYRQR-PAREALRDAVEWFRAN 325 (328)
T ss_pred HHHhccCCCChHHHHHHcCCCCc-CHHHHHHHHHHHHHHh
Confidence 02356899999999999996 9999999999999874
No 39
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=100.00 E-value=1.7e-36 Score=279.93 Aligned_cols=309 Identities=20% Similarity=0.232 Sum_probs=229.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.+|+|+||||+||||++|++.|+++||.|++..|+.+...... ..+.-.....++..+.+|+.|++++.++++++ |.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~-~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc--dg 81 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTE-HLRKLEGAKERLKLFKADLLDEGSFDKAIDGC--DG 81 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHH-HHHhcccCcccceEEeccccccchHHHHHhCC--CE
Confidence 6789999999999999999999999999999999876532211 11111123456999999999999999999988 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCC-----CCCCCCCCCCCCC-----C
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVN-----KKVPFSEKDRTDQ-----P 227 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~-----~~~~~~e~~~~~~-----~ 227 (424)
|||+|..+...... ...+..+.++.||.|++++|++....+|||++||.+....+ ....++|+.+.+. .
T Consensus 82 VfH~Asp~~~~~~~-~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~ 160 (327)
T KOG1502|consen 82 VFHTASPVDFDLED-PEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCK 160 (327)
T ss_pred EEEeCccCCCCCCC-cHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhh
Confidence 99999987654222 23379999999999999999999844599999997665432 2346777766421 1
Q ss_pred CChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCC-cHHHHHHHHHcCCceeEEecCCCCccccccccHHHH
Q 042406 228 ASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDM-AYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 306 (424)
...|+.||..+|..+.+++++.++..+.|.|+.|+||...++. ........+++|..-.. .+....||||+|+
T Consensus 161 ~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~------~n~~~~~VdVrDV 234 (327)
T KOG1502|consen 161 KLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETY------PNFWLAFVDVRDV 234 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccC------CCCceeeEeHHHH
Confidence 2679999999999999999999999999999999999876532 12234455666643222 2334449999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHh
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQR 386 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~ 386 (424)
|.||+.+++++... +.|.+.+. ..++.|+++++.+.++.-...................+++|+++
T Consensus 235 A~AHv~a~E~~~a~-------------GRyic~~~-~~~~~ei~~~l~~~~P~~~ip~~~~~~~~~~~~~~~~~~~k~k~ 300 (327)
T KOG1502|consen 235 ALAHVLALEKPSAK-------------GRYICVGE-VVSIKEIADILRELFPDYPIPKKNAEEHEGFLTSFKVSSEKLKS 300 (327)
T ss_pred HHHHHHHHcCcccC-------------ceEEEecC-cccHHHHHHHHHHhCCCCCCCCCCCccccccccccccccHHHHh
Confidence 99999999998743 45666554 46699999999999885541111111111222223578899877
Q ss_pred HcCCcccCCHHHHHHHHHHHHHHHh
Q 042406 387 ELGYMPTTDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 387 ~LG~~p~~~l~~~l~~~v~~~~~~~ 411 (424)
..|+... +++|++.++++++++..
T Consensus 301 lg~~~~~-~l~e~~~dt~~sl~~~~ 324 (327)
T KOG1502|consen 301 LGGFKFR-PLEETLSDTVESLREKG 324 (327)
T ss_pred cccceec-ChHHHHHHHHHHHHHhc
Confidence 5557666 99999999999998753
No 40
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=4.7e-36 Score=273.23 Aligned_cols=274 Identities=23% Similarity=0.278 Sum_probs=238.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|||||++|.+|.+|.+.|. .+++|+.++|.. +|++|++.+.+++++.+||+||
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~------------------------~Ditd~~~v~~~i~~~~PDvVI 55 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE------------------------LDITDPDAVLEVIRETRPDVVI 55 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc------------------------ccccChHHHHHHHHhhCCCEEE
Confidence 459999999999999999998 778999998721 7999999999999999999999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
|+|+...++.++.+++..+.+|..|+.|++++|.+.|. .+||+||..||....+.|+.|+|++ .|.+.||.||+++|
T Consensus 56 n~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga--~lVhiSTDyVFDG~~~~~Y~E~D~~-~P~nvYG~sKl~GE 132 (281)
T COG1091 56 NAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA--RLVHISTDYVFDGEKGGPYKETDTP-NPLNVYGRSKLAGE 132 (281)
T ss_pred ECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC--eEEEeecceEecCCCCCCCCCCCCC-CChhhhhHHHHHHH
Confidence 99999999999999999999999999999999999997 7999999999998888899999988 99999999999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
..+++. +-+.+|+|.+++||..+ .++...+++....++.+.++ .++..+.+++.|+|+++..+++....
T Consensus 133 ~~v~~~----~~~~~I~Rtswv~g~~g--~nFv~tml~la~~~~~l~vv-----~Dq~gsPt~~~dlA~~i~~ll~~~~~ 201 (281)
T COG1091 133 EAVRAA----GPRHLILRTSWVYGEYG--NNFVKTMLRLAKEGKELKVV-----DDQYGSPTYTEDLADAILELLEKEKE 201 (281)
T ss_pred HHHHHh----CCCEEEEEeeeeecCCC--CCHHHHHHHHhhcCCceEEE-----CCeeeCCccHHHHHHHHHHHHhcccc
Confidence 999887 45779999999999866 55677888888899999886 58899999999999999999988753
Q ss_pred cCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccc-cccC---CC-CCCcccccCChHHHHhHcCCcccC
Q 042406 320 STGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETK-VLPL---PR-NGDVQFTHANISLAQRELGYMPTT 394 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-~~~~---~~-~~~~~~~~~d~s~~~~~LG~~p~~ 394 (424)
. ++||+++...+||-|+++.|.+.++.+.... .... |. ...+.+..+|+.|+...+|+.|.
T Consensus 202 ~-------------~~yH~~~~g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~~a~RP~~S~L~~~k~~~~~g~~~~- 267 (281)
T COG1091 202 G-------------GVYHLVNSGECSWYEFAKAIFEEAGVDGEVIEPIASAEYPTPAKRPANSSLDTKKLEKAFGLSLP- 267 (281)
T ss_pred C-------------cEEEEeCCCcccHHHHHHHHHHHhCCCccccccccccccCccCCCCcccccchHHHHHHhCCCCc-
Confidence 2 5999999887999999999999998655332 1111 11 12333467999999999999888
Q ss_pred CHHHHHHHHHHH
Q 042406 395 DLETGLKKFVRW 406 (424)
Q Consensus 395 ~l~~~l~~~v~~ 406 (424)
+|+++++++++.
T Consensus 268 ~w~~~l~~~~~~ 279 (281)
T COG1091 268 EWREALKALLDE 279 (281)
T ss_pred cHHHHHHHHHhh
Confidence 899999888764
No 41
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=100.00 E-value=3.3e-36 Score=289.45 Aligned_cols=276 Identities=19% Similarity=0.199 Sum_probs=217.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
+++|+||||||+||||++|+++|+++| ++|++++|+...... .. ......++.++.+|++|.+.+.++++++
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~----~~-~~~~~~~~~~v~~Dl~d~~~l~~~~~~i- 75 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWE----MQ-QKFPAPCLRFFIGDVRDKERLTRALRGV- 75 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHH----HH-HHhCCCcEEEEEccCCCHHHHHHHHhcC-
Confidence 467899999999999999999999987 789999986432111 11 1112246899999999999999999865
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
|+|||+||.........+++..+++|+.|+.+++++|++.+.+ +||++||...+ .|.+.|+.|
T Consensus 76 -D~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~-~iV~~SS~~~~---------------~p~~~Y~~s 138 (324)
T TIGR03589 76 -DYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVK-RVVALSTDKAA---------------NPINLYGAT 138 (324)
T ss_pred -CEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEeCCCCC---------------CCCCHHHHH
Confidence 9999999986554455667889999999999999999998875 99999995332 456789999
Q ss_pred HHHHHHHHHHHHH---HhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCC-ceeEEecCCCCccccccccHHHHHHHH
Q 042406 235 KKAGEAIAHAYNH---IYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGK-RITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 235 K~~~e~~~~~~~~---~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
|+++|.+++.++. ..|++++++|||+||||++ .+++.+...+..+. +++++ ++++.++|+|++|+|+++
T Consensus 139 K~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~---~~i~~~~~~~~~~~~~~~i~----~~~~~r~~i~v~D~a~a~ 211 (324)
T TIGR03589 139 KLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG---SVVPFFKSLKEEGVTELPIT----DPRMTRFWITLEQGVNFV 211 (324)
T ss_pred HHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC---CcHHHHHHHHHhCCCCeeeC----CCCceEeeEEHHHHHHHH
Confidence 9999999988653 4589999999999999864 35667777777775 56663 577889999999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCc-ccccCChHHHHhHcC
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDV-QFTHANISLAQRELG 389 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~-~~~~~d~s~~~~~LG 389 (424)
+.+++... .+++| ++++..+++.|+++.+.+..+.. ..+ .+.++. .....|.+++++.||
T Consensus 212 ~~al~~~~-------------~~~~~-~~~~~~~sv~el~~~i~~~~~~~----~~~-~~~g~~~~~~~~~~~~~~~~lg 272 (324)
T TIGR03589 212 LKSLERML-------------GGEIF-VPKIPSMKITDLAEAMAPECPHK----IVG-IRPGEKLHEVMITEDDARHTYE 272 (324)
T ss_pred HHHHhhCC-------------CCCEE-ccCCCcEEHHHHHHHHHhhCCee----EeC-CCCCchhHhhhcChhhhhhhcC
Confidence 99997632 11678 46667799999999999865322 222 234443 335689999999999
Q ss_pred CcccCCHHHHHH
Q 042406 390 YMPTTDLETGLK 401 (424)
Q Consensus 390 ~~p~~~l~~~l~ 401 (424)
|.|++++++++.
T Consensus 273 ~~~~~~l~~~~~ 284 (324)
T TIGR03589 273 LGDYYAILPSIS 284 (324)
T ss_pred CCCeEEEccccc
Confidence 999999999885
No 42
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=100.00 E-value=1.4e-36 Score=284.66 Aligned_cols=261 Identities=25% Similarity=0.270 Sum_probs=202.9
Q ss_pred EEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEE
Q 042406 83 LVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMH 160 (424)
Q Consensus 83 lItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~ 160 (424)
|||||+||||++|+++|+++| ++|+++++....... ..........++++|++|++++.++++++ |+|||
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~------~~~~~~~~~~~~~~Di~d~~~l~~a~~g~--d~V~H 72 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL------KDLQKSGVKEYIQGDITDPESLEEALEGV--DVVFH 72 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc------hhhhcccceeEEEeccccHHHHHHHhcCC--ceEEE
Confidence 699999999999999999999 799999985542110 11112233449999999999999999988 99999
Q ss_pred cccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCC-CCCC---CCCCCC-CCCCChHHHHH
Q 042406 161 LAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNK-KVPF---SEKDRT-DQPASLYAATK 235 (424)
Q Consensus 161 ~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~-~~~~---~e~~~~-~~~~~~Y~~sK 235 (424)
+|++..... ....+.++++|+.||.|++++|++.+++ +|||+||.++++... ..++ +|+.+. ..+.+.|+.||
T Consensus 73 ~Aa~~~~~~-~~~~~~~~~vNV~GT~nvl~aa~~~~Vk-rlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK 150 (280)
T PF01073_consen 73 TAAPVPPWG-DYPPEEYYKVNVDGTRNVLEAARKAGVK-RLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESK 150 (280)
T ss_pred eCccccccC-cccHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHH
Confidence 999865432 3456789999999999999999999986 999999999988622 2333 333322 23568899999
Q ss_pred HHHHHHHHHHHH---Hh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHH
Q 042406 236 KAGEAIAHAYNH---IY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 236 ~~~e~~~~~~~~---~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
+.+|+++.+++. +. .+++++|||..||||++.. +.+.+...+..+...... ++++...+++||+|+|.||
T Consensus 151 ~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~--~~~~~~~~~~~g~~~~~~---g~~~~~~~~vyV~NvA~ah 225 (280)
T PF01073_consen 151 ALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQR--LVPRLVKMVRSGLFLFQI---GDGNNLFDFVYVENVAHAH 225 (280)
T ss_pred HHHHHHHHhhcccccccccceeEEEEeccEEeCccccc--ccchhhHHHHhcccceee---cCCCceECcEeHHHHHHHH
Confidence 999999999876 22 5999999999999997653 244556666666444443 6778899999999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc-HHHHHHHHHHHhCccccc
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP-VSRLVSLLEKILKVKAET 363 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s-~~el~~~i~~~~g~~~~~ 363 (424)
+.+++...... ......|+.|+|++++|+. +.||...+.+.+|.+.+.
T Consensus 226 vlA~~~L~~~~-----~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~ 274 (280)
T PF01073_consen 226 VLAAQALLEPG-----KPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPK 274 (280)
T ss_pred HHHHHHhcccc-----ccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCc
Confidence 99887654320 0112556999999999999 999999999999987755
No 43
>PLN00016 RNA-binding protein; Provisional
Probab=100.00 E-value=7.1e-36 Score=293.36 Aligned_cols=291 Identities=21% Similarity=0.231 Sum_probs=222.3
Q ss_pred CCCCeEEEE----cCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHH--HHhhhhccCCeEEEEccCCCHHHHHHHh
Q 042406 77 TRGLTVLVT----GAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKK--ARKGLLERAGVFVIDADINDKSLLDKIF 150 (424)
Q Consensus 77 ~~~~~vlIt----Gg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~v~~~~~Dl~d~~~v~~~~ 150 (424)
..+|+|||| ||+||||++|+++|+++|++|++++|+.......... .....+...+++++.+|+.| +.+++
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~ 126 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV 126 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence 445789999 9999999999999999999999999976431110000 00011223468999999987 45555
Q ss_pred hccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCCh
Q 042406 151 NVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL 230 (424)
Q Consensus 151 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~ 230 (424)
...++|+|||+++. +..++.+++++|++.+++ +||++||.++|+.....+..|+++. .|..
T Consensus 127 ~~~~~d~Vi~~~~~----------------~~~~~~~ll~aa~~~gvk-r~V~~SS~~vyg~~~~~p~~E~~~~-~p~~- 187 (378)
T PLN00016 127 AGAGFDVVYDNNGK----------------DLDEVEPVADWAKSPGLK-QFLFCSSAGVYKKSDEPPHVEGDAV-KPKA- 187 (378)
T ss_pred ccCCccEEEeCCCC----------------CHHHHHHHHHHHHHcCCC-EEEEEccHhhcCCCCCCCCCCCCcC-CCcc-
Confidence 44467999999753 134678999999999986 9999999999997665666666544 3322
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHH
Q 042406 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
+|..+|.++++ .+++++++||+++|||+... .....++..+..+.++.++ +.+++.++|+|++|+|+++
T Consensus 188 ---sK~~~E~~l~~----~~l~~~ilRp~~vyG~~~~~-~~~~~~~~~~~~~~~i~~~---g~g~~~~~~i~v~Dva~ai 256 (378)
T PLN00016 188 ---GHLEVEAYLQK----LGVNWTSFRPQYIYGPGNNK-DCEEWFFDRLVRGRPVPIP---GSGIQLTQLGHVKDLASMF 256 (378)
T ss_pred ---hHHHHHHHHHH----cCCCeEEEeceeEECCCCCC-chHHHHHHHHHcCCceeec---CCCCeeeceecHHHHHHHH
Confidence 89999987754 48999999999999997643 3445667778888877664 5778899999999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCC---------CCCcccccCCh
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR---------NGDVQFTHANI 381 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~---------~~~~~~~~~d~ 381 (424)
+.+++++.. .+++||+++++.+|+.|+++.+.+.+|.+..+...+... +........|+
T Consensus 257 ~~~l~~~~~------------~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~ 324 (378)
T PLN00016 257 ALVVGNPKA------------AGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASP 324 (378)
T ss_pred HHHhcCccc------------cCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCH
Confidence 999987532 237999999999999999999999999876543322111 11123345799
Q ss_pred HHHHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 382 SLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 382 s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
+|++++|||+|+++++|+|+++++||++...
T Consensus 325 ~ka~~~LGw~p~~~l~egl~~~~~~~~~~~~ 355 (378)
T PLN00016 325 RKAKEELGWTPKFDLVEDLKDRYELYFGRGR 355 (378)
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999987543
No 44
>PLN02686 cinnamoyl-CoA reductase
Probab=100.00 E-value=1.1e-35 Score=290.38 Aligned_cols=300 Identities=15% Similarity=0.123 Sum_probs=219.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHh-hhh--ccCCeEEEEccCCCHHHHHHHhh
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARK-GLL--ERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~--~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
...++|+||||||+||||++|+++|+++|++|+++.|+.+..... ..... ... ...++.++.+|++|.+++.++++
T Consensus 49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~ 127 (367)
T PLN02686 49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD 127 (367)
T ss_pred cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence 356789999999999999999999999999999988864322111 11000 000 01358899999999999999999
Q ss_pred ccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCC--cccCCC--CC--CCCCCCCC-
Q 042406 152 VVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS-DPQPAIVWASSS--SVYGVN--KK--VPFSEKDR- 223 (424)
Q Consensus 152 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~--~vyg~~--~~--~~~~e~~~- 223 (424)
++ |+|||+|+...............++|+.++.+++++|++. +++ +||++||. .+||.. .. ..++|+.+
T Consensus 128 ~~--d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~-r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~ 204 (367)
T PLN02686 128 GC--AGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVR-KCVFTSSLLACVWRQNYPHDLPPVIDEESWS 204 (367)
T ss_pred hc--cEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCcc-EEEEeccHHHhcccccCCCCCCcccCCCCCC
Confidence 76 9999999986432211222456788999999999999986 665 99999996 577642 11 23455432
Q ss_pred ----CCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 224 ----TDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 224 ----~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
+..|.+.|+.||.++|.+++.+++.+|++++++||++||||+...... ..+..++.+. +.++ ++ ..++
T Consensus 205 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~--~~~~~~~~g~-~~~~---g~--g~~~ 276 (367)
T PLN02686 205 DESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNS--TATIAYLKGA-QEML---AD--GLLA 276 (367)
T ss_pred ChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCC--hhHHHHhcCC-CccC---CC--CCcC
Confidence 224567899999999999999988889999999999999997543221 1122344553 3443 23 3457
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHA 379 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 379 (424)
|+||+|+|++++.+++..... ..+++| +++++.+++.|+++.+.+.+|.+......+...+++......
T Consensus 277 ~v~V~Dva~A~~~al~~~~~~----------~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~d~~~~~~ 345 (367)
T PLN02686 277 TADVERLAEAHVCVYEAMGNK----------TAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSSSDDTPARFEL 345 (367)
T ss_pred eEEHHHHHHHHHHHHhccCCC----------CCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchhhcCCcccccc
Confidence 999999999999999753110 112578 788899999999999999999876654333222577788899
Q ss_pred ChHHHHhHcCCcccCCHH
Q 042406 380 NISLAQRELGYMPTTDLE 397 (424)
Q Consensus 380 d~s~~~~~LG~~p~~~l~ 397 (424)
|++|++++|||.|+-.++
T Consensus 346 d~~kl~~~l~~~~~~~~~ 363 (367)
T PLN02686 346 SNKKLSRLMSRTRRCCYD 363 (367)
T ss_pred cHHHHHHHHHHhhhcccc
Confidence 999999999999985544
No 45
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-36 Score=281.05 Aligned_cols=316 Identities=23% Similarity=0.285 Sum_probs=249.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhh--ccCCeEEEEccCCCHHHHHHHhhc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLL--ERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
.++.+++||||+||+|++|+++|++++ .+|+++|..... .....+.. ....+.++++|+.|...+.+++++
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~-----~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~ 76 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQ-----SNLPAELTGFRSGRVTVILGDLLDANSISNAFQG 76 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccc-----cccchhhhcccCCceeEEecchhhhhhhhhhccC
Confidence 456789999999999999999999998 799999985421 11111111 257899999999999999999996
Q ss_pred cCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC--CCCCCh
Q 042406 153 VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT--DQPASL 230 (424)
Q Consensus 153 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~--~~~~~~ 230 (424)
+ .|+|+|+...+.....+++.++++|+.||.+++++|++.+++ ++||+||.+|+.........+++.+ ....+.
T Consensus 77 ~---~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~-~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~ 152 (361)
T KOG1430|consen 77 A---VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVK-RLIYTSSAYVVFGGEPIINGDESLPYPLKHIDP 152 (361)
T ss_pred c---eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCC-EEEEecCceEEeCCeecccCCCCCCCccccccc
Confidence 5 667777665556666688999999999999999999999997 9999999999876554333333322 123368
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHH
Q 042406 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
|+.||+.+|.++.+.+...++.++++||..||||++.. ..+.+...+..++.+... +..+...+++++++|+.++
T Consensus 153 Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~--~~~~i~~~~~~g~~~f~~---g~~~~~~~~~~~~Nva~ah 227 (361)
T KOG1430|consen 153 YGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKR--LLPKIVEALKNGGFLFKI---GDGENLNDFTYGENVAWAH 227 (361)
T ss_pred cchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCcc--ccHHHHHHHHccCceEEe---eccccccceEEechhHHHH
Confidence 99999999999999997668999999999999998753 355677778888877665 5668899999999999999
Q ss_pred HHHhhhcc-ccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccc-ccccCC-------------------
Q 042406 311 LAGLDTAK-KSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET-KVLPLP------------------- 369 (424)
Q Consensus 311 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~-~~~~~~------------------- 369 (424)
+.+..... ..+. ..|+.|+|.+++++...+++..+.+.+|...+. ...|..
T Consensus 228 ilA~~aL~~~~~~--------~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~ 299 (361)
T KOG1430|consen 228 ILAARALLDKSPS--------VNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPY 299 (361)
T ss_pred HHHHHHHHhcCCc--------cCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCC
Confidence 98877665 3333 556999999999999999999999999987762 211100
Q ss_pred CCCCc--------ccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhccC
Q 042406 370 RNGDV--------QFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 370 ~~~~~--------~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~~ 414 (424)
.+... ....+++.||+++|||.|..++++++.+++.|+.......
T Consensus 300 ~p~lt~~~v~~~~~~~~f~~~kA~~~lgY~P~~~~~e~~~~~~~~~~~~~~~~ 352 (361)
T KOG1430|consen 300 QPILTRFRVALLGVTRTFSIEKAKRELGYKPLVSLEEAIQRTIHWVASESDSA 352 (361)
T ss_pred CCCcChhheeeeccccccCHHHHHHhhCCCCcCCHHHHHHHHHHHHhhhhhcc
Confidence 11111 1235899999999999999999999999999998876653
No 46
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=100.00 E-value=3.2e-35 Score=269.98 Aligned_cols=233 Identities=33% Similarity=0.509 Sum_probs=205.7
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEEc
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHL 161 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~~ 161 (424)
||||||+||||++|+++|+++|+.|+.+.|.......... ..++.++.+|+.|.+.+.++++..++|+|||+
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~--------~~~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~ 72 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEK--------KLNVEFVIGDLTDKEQLEKLLEKANIDVVIHL 72 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHH--------HTTEEEEESETTSHHHHHHHHHHHTESEEEEE
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccc--------cceEEEEEeeccccccccccccccCceEEEEe
Confidence 7999999999999999999999999999987653222111 12889999999999999999999899999999
Q ss_pred ccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 042406 162 AAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAI 241 (424)
Q Consensus 162 Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~ 241 (424)
|+.........+....++.|+.++.+++++|++.+. ++||++||+.+|+.....+++|+++. .|.+.|+.+|..+|.+
T Consensus 73 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~~i~~sS~~~y~~~~~~~~~e~~~~-~~~~~Y~~~K~~~e~~ 150 (236)
T PF01370_consen 73 AAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGV-KRFIFLSSASVYGDPDGEPIDEDSPI-NPLSPYGASKRAAEEL 150 (236)
T ss_dssp BSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-SEEEEEEEGGGGTSSSSSSBETTSGC-CHSSHHHHHHHHHHHH
T ss_pred eccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccc-cccccccccccccccc
Confidence 998654344467788999999999999999999998 49999999999999877788998877 8889999999999999
Q ss_pred HHHHHHHhCCcEEEEEeccccCCC---CCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 242 AHAYNHIYGLSITGLRFFTVYGPW---GRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 242 ~~~~~~~~~i~~~~vrp~~v~G~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
++.+.++++++++++||+++|||+ .....+++.++..+.+++++.++ +++++.++|+|++|+|++++.+++++.
T Consensus 151 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~D~a~~~~~~~~~~~ 227 (236)
T PF01370_consen 151 LRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIP---GDGSQVRDFIHVDDLAEAIVAALENPK 227 (236)
T ss_dssp HHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEE---STSSCEEEEEEHHHHHHHHHHHHHHSC
T ss_pred ccccccccccccccccccccccccccccccccccchhhHHhhcCCccccc---CCCCCccceEEHHHHHHHHHHHHhCCC
Confidence 999999889999999999999998 55577888999999999998887 688999999999999999999999987
Q ss_pred ccCCCCCCCCCCCCcceEEcC
Q 042406 319 KSTGSGGKKKGPAEFRIFNLG 339 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~i~ 339 (424)
+.+++|||+
T Consensus 228 ------------~~~~~yNig 236 (236)
T PF01370_consen 228 ------------AAGGIYNIG 236 (236)
T ss_dssp ------------TTTEEEEES
T ss_pred ------------CCCCEEEeC
Confidence 233899986
No 47
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=100.00 E-value=3.3e-35 Score=260.24 Aligned_cols=317 Identities=23% Similarity=0.282 Sum_probs=263.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHH-HHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLK-KARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
+|+.||||-||+-|.+|++.|++.|+.|.++.|.++....... ..........+++.+.+|++|...+.++++.++||.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~PdE 81 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPDE 81 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCchh
Confidence 5789999999999999999999999999999997665444321 112233345669999999999999999999999999
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK 236 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~ 236 (424)
|+|+|+..++..+.+.|+.+.+++-.|+.+||++.+-.+. +.+|...||+..||.....|.+|+.|. .|.++|+.+|+
T Consensus 82 IYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPF-yPrSPYAvAKl 160 (345)
T COG1089 82 IYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPF-YPRSPYAVAKL 160 (345)
T ss_pred heeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCC-CCCCHHHHHHH
Confidence 9999999999999999999999999999999999998875 459999999999999888999999977 89999999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHH---HHHcCCceeEEecCCCCccccccccHHHHHHHHHHH
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTR---DIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAG 313 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 313 (424)
.+.-+...+.+.+|+-.+.=..++--+|..........+.. .+..|..-.++. |+-+..|||-|+.|.++++..+
T Consensus 161 Ya~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~l--GNldAkRDWG~A~DYVe~mwlm 238 (345)
T COG1089 161 YAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYL--GNLDAKRDWGHAKDYVEAMWLM 238 (345)
T ss_pred HHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEe--ccccccccccchHHHHHHHHHH
Confidence 99999999999999876655555555665444444444433 344565555543 7889999999999999999999
Q ss_pred hhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccc----------------cc----cCCCCCC
Q 042406 314 LDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETK----------------VL----PLPRNGD 373 (424)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~----------------~~----~~~~~~~ 373 (424)
++++.+ ..|+++.|+..|++|++++..+..|.+..+. .+ ...++.+
T Consensus 239 LQq~~P--------------ddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaE 304 (345)
T COG1089 239 LQQEEP--------------DDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAE 304 (345)
T ss_pred HccCCC--------------CceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchh
Confidence 998764 6899999999999999999999999766542 11 1224556
Q ss_pred cccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 374 VQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 374 ~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
......|.+|+++.|||+|.++++|.+++++++..+...
T Consensus 305 V~~Llgdp~KA~~~LGW~~~~~~~elv~~Mv~~dl~~~~ 343 (345)
T COG1089 305 VDLLLGDPTKAKEKLGWRPEVSLEELVREMVEADLEAAR 343 (345)
T ss_pred hhhhcCCHHHHHHHcCCccccCHHHHHHHHHHHHHHHhh
Confidence 666789999999999999999999999999999877543
No 48
>CHL00194 ycf39 Ycf39; Provisional
Probab=100.00 E-value=3.2e-33 Score=268.22 Aligned_cols=278 Identities=18% Similarity=0.182 Sum_probs=211.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|+|||||||||++++++|+++|++|++++|+.+.. ......+++++.+|+.|++++.++++++ |+||
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~---------~~l~~~~v~~v~~Dl~d~~~l~~al~g~--d~Vi 69 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKA---------SFLKEWGAELVYGDLSLPETLPPSFKGV--TAII 69 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHh---------hhHhhcCCEEEECCCCCHHHHHHHHCCC--CEEE
Confidence 6899999999999999999999999999999964311 1112247899999999999999999976 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
|+++.. ..++....++|+.++.+++++|++.+++ +||++||.+... .+...|..+|..+|
T Consensus 70 ~~~~~~-----~~~~~~~~~~~~~~~~~l~~aa~~~gvk-r~I~~Ss~~~~~--------------~~~~~~~~~K~~~e 129 (317)
T CHL00194 70 DASTSR-----PSDLYNAKQIDWDGKLALIEAAKAAKIK-RFIFFSILNAEQ--------------YPYIPLMKLKSDIE 129 (317)
T ss_pred ECCCCC-----CCCccchhhhhHHHHHHHHHHHHHcCCC-EEEEeccccccc--------------cCCChHHHHHHHHH
Confidence 997642 2344567889999999999999999986 999999954321 12356889999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
.+++. .+++++++||+.+|+... ..+...+..+.++.+ .+++..++|+|++|+|++++.+++.+..
T Consensus 130 ~~l~~----~~l~~tilRp~~~~~~~~------~~~~~~~~~~~~~~~----~~~~~~~~~i~v~Dva~~~~~~l~~~~~ 195 (317)
T CHL00194 130 QKLKK----SGIPYTIFRLAGFFQGLI------SQYAIPILEKQPIWI----TNESTPISYIDTQDAAKFCLKSLSLPET 195 (317)
T ss_pred HHHHH----cCCCeEEEeecHHhhhhh------hhhhhhhccCCceEe----cCCCCccCccCHHHHHHHHHHHhcCccc
Confidence 87754 489999999999886311 111222334455444 3556778999999999999999976542
Q ss_pred cCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCC----------------C----------CC
Q 042406 320 STGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR----------------N----------GD 373 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~----------------~----------~~ 373 (424)
.+++||+++++.+|++|+++.+.+.+|.+..+...|... . ..
T Consensus 196 ------------~~~~~ni~g~~~~s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 263 (317)
T CHL00194 196 ------------KNKTFPLVGPKSWNSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNT 263 (317)
T ss_pred ------------cCcEEEecCCCccCHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhc
Confidence 238999999999999999999999999876554433210 0 00
Q ss_pred cccccCChHHHHhHcCCccc--CCHHHHHHHHHHHHHHHhccC
Q 042406 374 VQFTHANISLAQRELGYMPT--TDLETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 374 ~~~~~~d~s~~~~~LG~~p~--~~l~~~l~~~v~~~~~~~~~~ 414 (424)
......+.+++++.||+.|. .++++++++++.-.++..+..
T Consensus 264 ~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 306 (317)
T CHL00194 264 SNNFSSSMAELYKIFKIDPNELISLEDYFQEYFERILKRLKDI 306 (317)
T ss_pred CCCcCCCHHHHHHHhCCChhhhhhHHHHHHHHHHHHHHHHHhc
Confidence 11233567788999999984 589999999998887765543
No 49
>PLN02778 3,5-epimerase/4-reductase
Probab=100.00 E-value=4.5e-32 Score=257.39 Aligned_cols=272 Identities=16% Similarity=0.223 Sum_probs=205.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
..|+||||||+||||++|++.|+++|++|+... .|+.|.+.+...++..+||+
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~---------------------------~~~~~~~~v~~~l~~~~~D~ 60 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS---------------------------GRLENRASLEADIDAVKPTH 60 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec---------------------------CccCCHHHHHHHHHhcCCCE
Confidence 347899999999999999999999999987542 25667777888888778899
Q ss_pred EEEcccccCc---hhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCC------CCCCCCCCCCCCCC
Q 042406 158 VMHLAAQAGV---RYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNK------KVPFSEKDRTDQPA 228 (424)
Q Consensus 158 vi~~Ag~~~~---~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~------~~~~~e~~~~~~~~ 228 (424)
|||+||..+. .++..++...+++|+.|+.+++++|++.++ +++++||.++|+... ..++.|++++..+.
T Consensus 61 ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv--~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~ 138 (298)
T PLN02778 61 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGL--VLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTG 138 (298)
T ss_pred EEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--CEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCC
Confidence 9999998653 235567889999999999999999999987 467778888887532 22477777665566
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHH
Q 042406 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 308 (424)
+.|+.||+++|.++..+.+ ..++|++.++|++.. ....++..++.+.++... + .+|+|++|+++
T Consensus 139 s~Yg~sK~~~E~~~~~y~~-----~~~lr~~~~~~~~~~---~~~~fi~~~~~~~~~~~~---~-----~s~~yv~D~v~ 202 (298)
T PLN02778 139 SFYSKTKAMVEELLKNYEN-----VCTLRVRMPISSDLS---NPRNFITKITRYEKVVNI---P-----NSMTILDELLP 202 (298)
T ss_pred CchHHHHHHHHHHHHHhhc-----cEEeeecccCCcccc---cHHHHHHHHHcCCCeeEc---C-----CCCEEHHHHHH
Confidence 8999999999999988753 467888888886422 123467888888776543 1 27999999999
Q ss_pred HHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCC-----CCcccccCChHH
Q 042406 309 GCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN-----GDVQFTHANISL 383 (424)
Q Consensus 309 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~-----~~~~~~~~d~s~ 383 (424)
+++.+++... +++||+++++.+|+.|+++++.+.++.+..+..+..+.. .......+|++|
T Consensus 203 al~~~l~~~~--------------~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~Ld~~k 268 (298)
T PLN02778 203 ISIEMAKRNL--------------TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPRSNNELDTTK 268 (298)
T ss_pred HHHHHHhCCC--------------CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCCccccccHHH
Confidence 9999986432 159999999999999999999999996533211111101 011123699999
Q ss_pred HHhHcCCcccCCHHHHHHHHHHHHHH
Q 042406 384 AQRELGYMPTTDLETGLKKFVRWYLS 409 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~~~~~ 409 (424)
+++.++-.+. ..+++++..++-++.
T Consensus 269 ~~~~~~~~~~-~~~~~~~~~~~~~~~ 293 (298)
T PLN02778 269 LKREFPELLP-IKESLIKYVFEPNKK 293 (298)
T ss_pred HHHhcccccc-hHHHHHHHHHHHHHh
Confidence 9998876554 567777777776643
No 50
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-31 Score=227.82 Aligned_cols=294 Identities=20% Similarity=0.244 Sum_probs=239.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD---GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
+|+|+||||+|.+|++|.+.+.+.|. +.+.... -.+|+++.++++++|+..+|
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s------------------------kd~DLt~~a~t~~lF~~ekP 56 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS------------------------KDADLTNLADTRALFESEKP 56 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc------------------------ccccccchHHHHHHHhccCC
Confidence 47899999999999999999999875 2222221 14799999999999999999
Q ss_pred cEEEEcccccCchh-hccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCC----CCCCCCCh
Q 042406 156 THVMHLAAQAGVRY-AMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKD----RTDQPASL 230 (424)
Q Consensus 156 d~vi~~Ag~~~~~~-~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~----~~~~~~~~ 230 (424)
.+|||+|+.++.-. ....+.+.++.|+.--.|++..|-+.|++ +++++-|.++|-.....|++|.- ++.+..-.
T Consensus 57 thVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~-K~vsclStCIfPdkt~yPIdEtmvh~gpphpsN~g 135 (315)
T KOG1431|consen 57 THVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVK-KVVSCLSTCIFPDKTSYPIDETMVHNGPPHPSNFG 135 (315)
T ss_pred ceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchh-hhhhhcceeecCCCCCCCCCHHHhccCCCCCCchH
Confidence 99999999876532 34456789999999999999999999997 89999999999988888888853 44444567
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC----CcHHHHHHHHH----cCC-ceeEEecCCCCccccccc
Q 042406 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD----MAYFFFTRDII----RGK-RITVYEAPDGASVARDFT 301 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~i 301 (424)
|+.+|.++.-..+.+..++|-.++.+-|.++|||.+..+ ..++.++..+- .|. .+.+| |.+...|.|+
T Consensus 136 YsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~Vw---GsG~PlRqFi 212 (315)
T KOG1431|consen 136 YSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVW---GSGSPLRQFI 212 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEe---cCCChHHHHh
Confidence 999998888777999999999999999999999987543 34555554433 333 67787 8999999999
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC--cccHHHHHHHHHHHhCcccccccccCCCCCCcccccC
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT--PVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHA 379 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 379 (424)
|++|+|++++.++++-... +..+++.|+ .+|++|+++++.+.++...+..+-..- +.......+
T Consensus 213 ys~DLA~l~i~vlr~Y~~v-------------Epiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK-~DGq~kKta 278 (315)
T KOG1431|consen 213 YSDDLADLFIWVLREYEGV-------------EPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTK-SDGQFKKTA 278 (315)
T ss_pred hHhHHHHHHHHHHHhhcCc-------------cceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccC-CCCCccccc
Confidence 9999999999999886543 457777776 799999999999999988877765432 334445678
Q ss_pred ChHHHHhHcCCcccCC-HHHHHHHHHHHHHHHhccCC
Q 042406 380 NISLAQRELGYMPTTD-LETGLKKFVRWYLSYYNSAS 415 (424)
Q Consensus 380 d~s~~~~~LG~~p~~~-l~~~l~~~v~~~~~~~~~~~ 415 (424)
|++|+++ |+|.|+.+ |+++|.++++||.+.+...+
T Consensus 279 snsKL~s-l~pd~~ft~l~~ai~~t~~Wy~~Ny~qar 314 (315)
T KOG1431|consen 279 SNSKLRS-LLPDFKFTPLEQAISETVQWYLDNYEQAR 314 (315)
T ss_pred chHHHHH-hCCCcccChHHHHHHHHHHHHHHhHHhhc
Confidence 9999976 89999976 99999999999999887543
No 51
>PRK05865 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-31 Score=278.89 Aligned_cols=256 Identities=19% Similarity=0.219 Sum_probs=195.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|+||||+||||++++++|+++|++|++++|+... . ...++.++.+|++|.+++.++++++ |+||
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~--------~----~~~~v~~v~gDL~D~~~l~~al~~v--D~VV 66 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD--------S----WPSSADFIAADIRDATAVESAMTGA--DVVA 66 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh--------h----cccCceEEEeeCCCHHHHHHHHhCC--CEEE
Confidence 579999999999999999999999999999985321 0 0135789999999999999999865 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
|||+.... .+++|+.++.+++++|++.+++ +||++||.+ |.++|
T Consensus 67 HlAa~~~~---------~~~vNv~GT~nLLeAa~~~gvk-r~V~iSS~~--------------------------K~aaE 110 (854)
T PRK05865 67 HCAWVRGR---------NDHINIDGTANVLKAMAETGTG-RIVFTSSGH--------------------------QPRVE 110 (854)
T ss_pred ECCCcccc---------hHHHHHHHHHHHHHHHHHcCCC-eEEEECCcH--------------------------HHHHH
Confidence 99986321 4689999999999999999875 999999842 88888
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
.++.+ ++++++++||++||||+.. .++..+.. ..++. .+..+..++|+|++|+|++++.+++....
T Consensus 111 ~ll~~----~gl~~vILRp~~VYGP~~~------~~i~~ll~---~~v~~-~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~ 176 (854)
T PRK05865 111 QMLAD----CGLEWVAVRCALIFGRNVD------NWVQRLFA---LPVLP-AGYADRVVQVVHSDDAQRLLVRALLDTVI 176 (854)
T ss_pred HHHHH----cCCCEEEEEeceEeCCChH------HHHHHHhc---Cceec-cCCCCceEeeeeHHHHHHHHHHHHhCCCc
Confidence 87743 5999999999999999632 23333332 22221 14456677999999999999998865421
Q ss_pred cCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhC---cccccccccCC-CCCCcccccCChHHHHhHcCCcccCC
Q 042406 320 STGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILK---VKAETKVLPLP-RNGDVQFTHANISLAQRELGYMPTTD 395 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g---~~~~~~~~~~~-~~~~~~~~~~d~s~~~~~LG~~p~~~ 395 (424)
.+++||+++++.+|+.|+++.+.+... .+......+.. .........+|++|+++.|||+|+++
T Consensus 177 ------------~ggvyNIgsg~~~Si~EIae~l~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~s 244 (854)
T PRK05865 177 ------------DSGPVNLAAPGELTFRRIAAALGRPMVPIGSPVLRRVTSFAELELLHSAPLMDVTLLRDRWGFQPAWN 244 (854)
T ss_pred ------------CCCeEEEECCCcccHHHHHHHHhhhhccCCchhhhhccchhhhhcccCCccCCHHHHHHHhCCCCCCC
Confidence 126899999999999999999987532 11111000000 00111234689999999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q 042406 396 LETGLKKFVRWYLSYY 411 (424)
Q Consensus 396 l~~~l~~~v~~~~~~~ 411 (424)
++++|+++++||+...
T Consensus 245 LeeGL~dti~~~r~ri 260 (854)
T PRK05865 245 AEECLEDFTLAVRGRI 260 (854)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999998753
No 52
>PLN02583 cinnamoyl-CoA reductase
Probab=100.00 E-value=5.4e-31 Score=250.40 Aligned_cols=280 Identities=16% Similarity=0.129 Sum_probs=196.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLL-ERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.++|+|+||||+||||++++++|+++|++|+++.|+.+.... ........ ...+++++.+|++|.+++.+++.++
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~--~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~-- 79 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEI--EKEIRGLSCEEERLKVFDVDPLDYHSILDALKGC-- 79 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhH--HHHHHhcccCCCceEEEEecCCCHHHHHHHHcCC--
Confidence 456889999999999999999999999999999985432111 00111110 1246889999999999999999876
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCcccCCC-----CCCCCCCCCCCC----
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS-DPQPAIVWASSSSVYGVN-----KKVPFSEKDRTD---- 225 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~-----~~~~~~e~~~~~---- 225 (424)
|.|+|.++..... ..+.+..+++|+.|+.+++++|.+. ++ ++||++||.+.++.. ...+++|+++..
T Consensus 80 d~v~~~~~~~~~~--~~~~~~~~~~nv~gt~~ll~aa~~~~~v-~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~ 156 (297)
T PLN02583 80 SGLFCCFDPPSDY--PSYDEKMVDVEVRAAHNVLEACAQTDTI-EKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFC 156 (297)
T ss_pred CEEEEeCccCCcc--cccHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEecchHheecccccCCCCCCCCcccCCCHHHH
Confidence 9999987653211 1235689999999999999999886 45 499999998765321 123566655421
Q ss_pred -CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHH
Q 042406 226 -QPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYID 304 (424)
Q Consensus 226 -~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 304 (424)
.+...|+.||..+|++++++.+..|+++++|||++||||+..... ..+.+.. ..+ ++..++||||+
T Consensus 157 ~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~-------~~~~~~~-~~~-----~~~~~~~v~V~ 223 (297)
T PLN02583 157 RKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN-------PYLKGAA-QMY-----ENGVLVTVDVN 223 (297)
T ss_pred hhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch-------hhhcCCc-ccC-----cccCcceEEHH
Confidence 112379999999999999998878999999999999999764321 1222221 221 12356799999
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHH
Q 042406 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLA 384 (424)
Q Consensus 305 Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~ 384 (424)
|+|++++.+++.+.. . +.|+++++......++.+++.+.++.-........ ...+.....+++.|+
T Consensus 224 Dva~a~~~al~~~~~------------~-~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~k~ 289 (297)
T PLN02583 224 FLVDAHIRAFEDVSS------------Y-GRYLCFNHIVNTEEDAVKLAQMLSPLIPSPPPYEM-QGSEVYQQRIRNKKL 289 (297)
T ss_pred HHHHHHHHHhcCccc------------C-CcEEEecCCCccHHHHHHHHHHhCCCCCCCCcccc-cCCCccccccChHHH
Confidence 999999999986532 1 46888876655568899999999874311110010 011223356788888
Q ss_pred HhHcCCc
Q 042406 385 QRELGYM 391 (424)
Q Consensus 385 ~~~LG~~ 391 (424)
++ ||++
T Consensus 290 ~~-l~~~ 295 (297)
T PLN02583 290 NK-LMED 295 (297)
T ss_pred HH-hCcc
Confidence 55 8876
No 53
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=100.00 E-value=1.1e-31 Score=245.92 Aligned_cols=242 Identities=27% Similarity=0.347 Sum_probs=187.2
Q ss_pred EEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeE----EEEccCCCHHHHHHHhhccCcc
Q 042406 82 VLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVF----VIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~----~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
||||||+|.||+.|+++|++.+ .++++++|++...-....+.+.. ....++. .+.+|++|.+.+.++|+..+||
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~-~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSR-FPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHH-C--TTCEEEEE--CTSCCHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhc-ccccCcccccCceeecccCHHHHHHHHhhcCCC
Confidence 7999999999999999999998 57999999766544433332211 1223443 4689999999999999988999
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK 236 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~ 236 (424)
+|||.|+.-+++..+..|.+++.+|+.||.|++++|.++++. +||++||.-.. +|.+.||+||.
T Consensus 80 iVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~-~~v~ISTDKAv---------------~PtnvmGatKr 143 (293)
T PF02719_consen 80 IVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVE-RFVFISTDKAV---------------NPTNVMGATKR 143 (293)
T ss_dssp EEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-S-EEEEEEECGCS---------------S--SHHHHHHH
T ss_pred EEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEccccccC---------------CCCcHHHHHHH
Confidence 999999999999999999999999999999999999999987 99999995442 68899999999
Q ss_pred HHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHH
Q 042406 237 AGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAG 313 (424)
Q Consensus 237 ~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 313 (424)
.+|.++..++... +.++++||+|+|.|..++ .++.|.+++.+|+|+++ .+++.+|-|+.++++++.++.+
T Consensus 144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS---Vip~F~~Qi~~g~PlTv----T~p~mtRffmti~EAv~Lvl~a 216 (293)
T PF02719_consen 144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS---VIPLFKKQIKNGGPLTV----TDPDMTRFFMTIEEAVQLVLQA 216 (293)
T ss_dssp HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS---CHHHHHHHHHTTSSEEE----CETT-EEEEE-HHHHHHHHHHH
T ss_pred HHHHHHHHHhhhCCCCCcEEEEEEecceecCCCc---HHHHHHHHHHcCCccee----CCCCcEEEEecHHHHHHHHHHH
Confidence 9999999998765 689999999999987544 68999999999999999 5789999999999999999998
Q ss_pred hhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcc
Q 042406 314 LDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360 (424)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~ 360 (424)
...... |++|.+--|+++++.|+++.+-+..|..
T Consensus 217 ~~~~~~-------------geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 217 AALAKG-------------GEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp HHH--T-------------TEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred HhhCCC-------------CcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 876542 2799998899999999999999999853
No 54
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.98 E-value=2.6e-30 Score=250.92 Aligned_cols=246 Identities=24% Similarity=0.278 Sum_probs=216.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..+||+||||||+|.||+.+++++++.+. ++++++|++........+.+.. ....++.++-+|+.|.+.+.+++++.+
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~-~~~~~~~~~igdVrD~~~~~~~~~~~k 325 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREK-FPELKLRFYIGDVRDRDRVERAMEGHK 325 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhh-CCCcceEEEecccccHHHHHHHHhcCC
Confidence 46899999999999999999999999985 7888899776554443333322 124788999999999999999999989
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
||+|||.|+.-+++..+.+|.+.+.+|+.||.|++++|.+++++ +||.+||.-. -+|.+.||+|
T Consensus 326 vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~-~~V~iSTDKA---------------V~PtNvmGaT 389 (588)
T COG1086 326 VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVK-KFVLISTDKA---------------VNPTNVMGAT 389 (588)
T ss_pred CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCC-EEEEEecCcc---------------cCCchHhhHH
Confidence 99999999999999999999999999999999999999999997 9999999433 2788999999
Q ss_pred HHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 235 KKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 235 K~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
|..+|.++..+++.. +.+++++|.|+|.|..++ .++.|.+++.+|+++++ .+++.+|-|..+.|.++.++
T Consensus 390 Kr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS---ViPlFk~QI~~GgplTv----Tdp~mtRyfMTI~EAv~LVl 462 (588)
T COG1086 390 KRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS---VIPLFKKQIAEGGPLTV----TDPDMTRFFMTIPEAVQLVL 462 (588)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCC---CHHHHHHHHHcCCCccc----cCCCceeEEEEHHHHHHHHH
Confidence 999999999998743 389999999999997554 68899999999999999 58999999999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhC
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILK 358 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g 358 (424)
.+..... +|.+|.+.-|+++++.|+++.+-+++|
T Consensus 463 qA~a~~~-------------gGeifvldMGepvkI~dLAk~mi~l~g 496 (588)
T COG1086 463 QAGAIAK-------------GGEIFVLDMGEPVKIIDLAKAMIELAG 496 (588)
T ss_pred HHHhhcC-------------CCcEEEEcCCCCeEHHHHHHHHHHHhC
Confidence 8887643 238999998999999999999999998
No 55
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.98 E-value=7.3e-31 Score=248.90 Aligned_cols=279 Identities=20% Similarity=0.184 Sum_probs=195.5
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEEc
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHL 161 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~~ 161 (424)
||||||+||||+++++.|+++|++|++++|+........ ... ..|+.. +.+.+.+.+ +|+|||+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~----~~~~~~-~~~~~~~~~--~D~Vvh~ 64 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK---------WEG----YKPWAP-LAESEALEG--ADAVINL 64 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc---------cee----eecccc-cchhhhcCC--CCEEEEC
Confidence 699999999999999999999999999999765321100 001 112222 344455554 4999999
Q ss_pred ccccCch--hhccChHHHHHHHHHHHHHHHHHHHhcCCC-CeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 162 AAQAGVR--YAMQNPNSYVESNIAGFVNLLETCKSSDPQ-PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 162 Ag~~~~~--~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||..... +....++..+++|+.++.+++++|++.+.+ .+||++||.++||.....++.|++++ .+.+.|+..+...
T Consensus 65 a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~-~~~~~~~~~~~~~ 143 (292)
T TIGR01777 65 AGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSP-AGDDFLAELCRDW 143 (292)
T ss_pred CCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCC-CCCChHHHHHHHH
Confidence 9974321 122234568899999999999999999863 36777788889997666677777644 4556677777777
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
|.....+. +.+++++++||+.||||+.. ....+...+....... + ++++..++|+|++|+|+++..+++++.
T Consensus 144 e~~~~~~~-~~~~~~~ilR~~~v~G~~~~---~~~~~~~~~~~~~~~~-~---g~~~~~~~~i~v~Dva~~i~~~l~~~~ 215 (292)
T TIGR01777 144 EEAAQAAE-DLGTRVVLLRTGIVLGPKGG---ALAKMLPPFRLGLGGP-L---GSGRQWFSWIHIEDLVQLILFALENAS 215 (292)
T ss_pred HHHhhhch-hcCCceEEEeeeeEECCCcc---hhHHHHHHHhcCcccc-c---CCCCcccccEeHHHHHHHHHHHhcCcc
Confidence 77665443 35899999999999999642 2233332222221111 2 577899999999999999999997643
Q ss_pred ccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCC--------CCC-cccccCChHHHHhHcC
Q 042406 319 KSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR--------NGD-VQFTHANISLAQRELG 389 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--------~~~-~~~~~~d~s~~~~~LG 389 (424)
. .++||+++++++|+.|+++.+.+.+|.+.... .|... ... ......++++++. +|
T Consensus 216 ~-------------~g~~~~~~~~~~s~~di~~~i~~~~g~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g 280 (292)
T TIGR01777 216 I-------------SGPVNATAPEPVRNKEFAKALARALHRPAFFP-VPAFVLRALLGEMADLLLKGQRVLPEKLLE-AG 280 (292)
T ss_pred c-------------CCceEecCCCccCHHHHHHHHHHHhCCCCcCc-CCHHHHHHHhchhhHHHhCCcccccHHHHh-cC
Confidence 2 15899999999999999999999999764322 22110 000 1234467888864 99
Q ss_pred CcccC-CHHHHH
Q 042406 390 YMPTT-DLETGL 400 (424)
Q Consensus 390 ~~p~~-~l~~~l 400 (424)
|+|++ +++|++
T Consensus 281 ~~~~~~~~~~~~ 292 (292)
T TIGR01777 281 FQFQYPDLDEAL 292 (292)
T ss_pred CeeeCcChhhcC
Confidence 99998 588764
No 56
>PLN02996 fatty acyl-CoA reductase
Probab=99.97 E-value=2.9e-30 Score=259.88 Aligned_cols=266 Identities=18% Similarity=0.215 Sum_probs=195.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEeCCCCchhhhHH---HHHhh---------------hhccCCeEE
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD---GVLGLDNFNNYYETSLK---KARKG---------------LLERAGVFV 135 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~---~~~~~---------------~~~~~~v~~ 135 (424)
.++|+|+|||||||||++|+++|++.+. +|+++.|..+....... ..... .....++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 4789999999999999999999998753 68999997653322111 10000 001268999
Q ss_pred EEccCC-------CHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc
Q 042406 136 IDADIN-------DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS 208 (424)
Q Consensus 136 ~~~Dl~-------d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~ 208 (424)
+.+|++ |.+.++++++++ |+|||+|+.... ..+++..+.+|+.|+.+++++|++.+..++||++||++
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~v--D~ViH~AA~v~~---~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~ 163 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEI--DIVVNLAATTNF---DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAY 163 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCC--CEEEECccccCC---cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeE
Confidence 999998 555677788765 999999998653 24678899999999999999999863234999999999
Q ss_pred ccCCCCC----CCCCCCC--------------------------------------------C--CCCCCChHHHHHHHH
Q 042406 209 VYGVNKK----VPFSEKD--------------------------------------------R--TDQPASLYAATKKAG 238 (424)
Q Consensus 209 vyg~~~~----~~~~e~~--------------------------------------------~--~~~~~~~Y~~sK~~~ 238 (424)
+||...+ .++.+.. + .....+.|+.||+++
T Consensus 164 vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a 243 (491)
T PLN02996 164 VCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG 243 (491)
T ss_pred EecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence 9986431 1222110 0 012346799999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCC-Cc------HHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPD-MA------YFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
|.++..+.. +++++++||++||||+..+. .+ ...++..+..|....++ +++++.+|++||+|+|.+++
T Consensus 244 E~lv~~~~~--~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~---gdg~~~~D~v~Vddvv~a~l 318 (491)
T PLN02996 244 EMLLGNFKE--NLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFL---ADPNSVLDVIPADMVVNAMI 318 (491)
T ss_pred HHHHHHhcC--CCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEe---cCCCeecceecccHHHHHHH
Confidence 999988754 89999999999999976542 11 12344444555555555 78899999999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCCC--CcccHHHHHHHHHHHhCccc
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNT--TPVPVSRLVSLLEKILKVKA 361 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~~ 361 (424)
.++....... ..+++||++++ .++|+.|+++.+.+.++..+
T Consensus 319 ~a~~~~~~~~---------~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 319 VAMAAHAGGQ---------GSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred HHHHHhhccC---------CCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence 9987632110 12379999998 88999999999999887543
No 57
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.97 E-value=7.7e-30 Score=268.63 Aligned_cols=303 Identities=17% Similarity=0.186 Sum_probs=214.9
Q ss_pred CeEEEEcCCChhHHHHHHHHH--hCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCH------HHHHHHhh
Q 042406 80 LTVLVTGAAGFVGSHVSLALK--KRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDK------SLLDKIFN 151 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~------~~v~~~~~ 151 (424)
|+|||||||||||++|+++|+ ++|++|++++|+.... ...... ......+++++.+|++|+ +.++++ +
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~--~~~~~~-~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~ 76 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLS--RLEALA-AYWGADRVVPLVGDLTEPGLGLSEADIAEL-G 76 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHH--HHHHHH-HhcCCCcEEEEecccCCccCCcCHHHHHHh-c
Confidence 589999999999999999999 5899999999954321 111111 111225789999999984 455555 5
Q ss_pred ccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC--CCCCC
Q 042406 152 VVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT--DQPAS 229 (424)
Q Consensus 152 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~--~~~~~ 229 (424)
++|+||||||..... ...+....+|+.|+.+++++|++.+.+ +|||+||.++||.... +++|++.. ..+.+
T Consensus 77 --~~D~Vih~Aa~~~~~---~~~~~~~~~nv~gt~~ll~~a~~~~~~-~~v~~SS~~v~g~~~~-~~~e~~~~~~~~~~~ 149 (657)
T PRK07201 77 --DIDHVVHLAAIYDLT---ADEEAQRAANVDGTRNVVELAERLQAA-TFHHVSSIAVAGDYEG-VFREDDFDEGQGLPT 149 (657)
T ss_pred --CCCEEEECceeecCC---CCHHHHHHHHhHHHHHHHHHHHhcCCC-eEEEEeccccccCccC-ccccccchhhcCCCC
Confidence 459999999975432 345678899999999999999998875 9999999999986432 34444321 23457
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCC-------cHHHHHHHHHcC-CceeEEecCCCCccccccc
Q 042406 230 LYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDM-------AYFFFTRDIIRG-KRITVYEAPDGASVARDFT 301 (424)
Q Consensus 230 ~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i 301 (424)
.|+.+|+++|.++.+. .+++++++||++||||...... .+..++..+... ....++ +.+...++++
T Consensus 150 ~Y~~sK~~~E~~~~~~---~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v 223 (657)
T PRK07201 150 PYHRTKFEAEKLVREE---CGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMV---GPDGGRTNIV 223 (657)
T ss_pred chHHHHHHHHHHHHHc---CCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccc---cCCCCeeeee
Confidence 8999999999998752 4899999999999998643211 111122222111 112222 3455678999
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccc---ccccccCCC--------
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA---ETKVLPLPR-------- 370 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~---~~~~~~~~~-------- 370 (424)
|++|+++++..+++.+. ..+++||+++++++++.|+++.+.+.+|.+. .....|...
T Consensus 224 ~vddva~ai~~~~~~~~------------~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~~~~~~~~~ 291 (657)
T PRK07201 224 PVDYVADALDHLMHKDG------------RDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFVAAPLLAAL 291 (657)
T ss_pred eHHHHHHHHHHHhcCcC------------CCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHHHHHHhhhc
Confidence 99999999998887433 2337999999999999999999999999876 332222110
Q ss_pred -------------CC--------CcccccCChHHHHhHc---CCcccCCHHHHHHHHHHHHHHHhc
Q 042406 371 -------------NG--------DVQFTHANISLAQREL---GYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 371 -------------~~--------~~~~~~~d~s~~~~~L---G~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
.+ -.....+|++++++.| |+... .+++.+.+.++|+.++..
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~f~~~~~~~~L~~~~~~~p-~~~~~~~~~~~~~~~~~~ 356 (657)
T PRK07201 292 GPVRRLRNAVATQLGIPPEVLDFVNYPTTFDSRETRAALKGSGIEVP-RLASYAPRLWDYWERHLD 356 (657)
T ss_pred chhhHHHHHHHHhcCCCHHHHHhccCCCeeccHHHHHHhccCCcCCC-ChHHHHHHHHHHHHhcCC
Confidence 00 0112467899999988 55444 688999999998888754
No 58
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.97 E-value=9.5e-30 Score=249.89 Aligned_cols=248 Identities=17% Similarity=0.137 Sum_probs=192.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
....++|+|+||||+|+||++++++|+++|++|++++|+.+........... .....+++++.+|++|.+++.+++++.
T Consensus 55 ~~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~-~~~~~~v~~v~~Dl~d~~~l~~~~~~~ 133 (390)
T PLN02657 55 SKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDT-KKELPGAEVVFGDVTDADSLRKVLFSE 133 (390)
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHH-hhhcCCceEEEeeCCCHHHHHHHHHHh
Confidence 3456789999999999999999999999999999999976432211000000 012357899999999999999999864
Q ss_pred --CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChH
Q 042406 154 --AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLY 231 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y 231 (424)
++|+||||++.... .....+++|+.++.+++++|++.+++ +||++||.++++ |...|
T Consensus 134 ~~~~D~Vi~~aa~~~~-----~~~~~~~vn~~~~~~ll~aa~~~gv~-r~V~iSS~~v~~---------------p~~~~ 192 (390)
T PLN02657 134 GDPVDVVVSCLASRTG-----GVKDSWKIDYQATKNSLDAGREVGAK-HFVLLSAICVQK---------------PLLEF 192 (390)
T ss_pred CCCCcEEEECCccCCC-----CCccchhhHHHHHHHHHHHHHHcCCC-EEEEEeeccccC---------------cchHH
Confidence 47999999885321 12345788999999999999999876 999999987753 34568
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc-ccccHHHHHHHH
Q 042406 232 AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR-DFTYIDDIVKGC 310 (424)
Q Consensus 232 ~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~Dva~a~ 310 (424)
..+|...|..+.. ...++++++|||+.+||+. ..++..+..++++.++ ++++..+ ++||++|+|+++
T Consensus 193 ~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~-------~~~~~~~~~g~~~~~~---GdG~~~~~~~I~v~DlA~~i 260 (390)
T PLN02657 193 QRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSL-------GGQVEIVKDGGPYVMF---GDGKLCACKPISEADLASFI 260 (390)
T ss_pred HHHHHHHHHHHHh--ccCCCCEEEEccHHHhccc-------HHHHHhhccCCceEEe---cCCcccccCceeHHHHHHHH
Confidence 8999999988765 3458999999999999752 1245566778877766 5666544 689999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCC-CcccHHHHHHHHHHHhCccccccccc
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT-TPVPVSRLVSLLEKILKVKAETKVLP 367 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~el~~~i~~~~g~~~~~~~~~ 367 (424)
+.++.++. ..+++||++++ +.+|+.|+++++.+.+|.+.++...|
T Consensus 261 ~~~~~~~~------------~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp 306 (390)
T PLN02657 261 ADCVLDES------------KINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVP 306 (390)
T ss_pred HHHHhCcc------------ccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcC
Confidence 99987543 22389999985 68999999999999999877665544
No 59
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.96 E-value=2.8e-27 Score=231.34 Aligned_cols=259 Identities=21% Similarity=0.261 Sum_probs=185.6
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhh--HHH-HHhhhh-----ccCCeEEEEccCCCH------H
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETS--LKK-ARKGLL-----ERAGVFVIDADINDK------S 144 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~--~~~-~~~~~~-----~~~~v~~~~~Dl~d~------~ 144 (424)
+|+|||||||||++|+++|+++| ++|+++.|+.+..... ... ...... ...+++++.+|++++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 48999999999999999999999 6799999976532111 000 000000 015799999999854 4
Q ss_pred HHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 145 LLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 145 ~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
...++.+++ |+|||||+.... ....+...++|+.|+.+++++|.+.+.+ +|+++||.++|+.....+..++++.
T Consensus 81 ~~~~~~~~~--d~vih~a~~~~~---~~~~~~~~~~nv~g~~~ll~~a~~~~~~-~~v~iSS~~v~~~~~~~~~~~~~~~ 154 (367)
T TIGR01746 81 EWERLAENV--DTIVHNGALVNW---VYPYSELRAANVLGTREVLRLAASGRAK-PLHYVSTISVLAAIDLSTVTEDDAI 154 (367)
T ss_pred HHHHHHhhC--CEEEeCCcEecc---CCcHHHHhhhhhHHHHHHHHHHhhCCCc-eEEEEccccccCCcCCCCccccccc
Confidence 566666655 999999997542 2345677889999999999999998875 7999999999986443333333321
Q ss_pred ----CCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC----CCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 225 ----DQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP----DMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 225 ----~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
..+.+.|+.+|+++|.+++.+.+. |++++++|||.|||+.... ...+..++........ ++ .....
T Consensus 155 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~---~p--~~~~~ 228 (367)
T TIGR01746 155 VTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGA---YP--DSPEL 228 (367)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCC---CC--CCCcc
Confidence 123468999999999999887665 9999999999999974322 1122333333333222 21 12234
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE 362 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~ 362 (424)
..+++|++|++++++.++...... ..+++||+++++++++.|+++.+.+ +|.+.+
T Consensus 229 ~~~~~~vddva~ai~~~~~~~~~~----------~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~ 283 (367)
T TIGR01746 229 TEDLTPVDYVARAIVALSSQPAAS----------AGGPVFHVVNPEPVSLDEFLEWLER-AGYNLK 283 (367)
T ss_pred ccCcccHHHHHHHHHHHHhCCCcc----------cCCceEEecCCCCCCHHHHHHHHHH-cCCCCC
Confidence 678999999999999988765421 0137999999999999999999999 786654
No 60
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.96 E-value=2.6e-27 Score=249.08 Aligned_cols=267 Identities=17% Similarity=0.234 Sum_probs=198.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
..|+||||||+||||++|++.|.++|++|... .+|++|.+.+.+.++..+||+
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~---------------------------~~~l~d~~~v~~~i~~~~pd~ 431 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG---------------------------KGRLEDRSSLLADIRNVKPTH 431 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEee---------------------------ccccccHHHHHHHHHhhCCCE
Confidence 55899999999999999999999999887421 136889999999999889999
Q ss_pred EEEcccccC---chhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCC------CCCCCCCCCCCCCCC
Q 042406 158 VMHLAAQAG---VRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVN------KKVPFSEKDRTDQPA 228 (424)
Q Consensus 158 vi~~Ag~~~---~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~------~~~~~~e~~~~~~~~ 228 (424)
|||+|+..+ .+.++.+++..+++|+.|+.+|+++|++.++ ++|++||.++|+.. ...++.|++++..+.
T Consensus 432 Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~--~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~ 509 (668)
T PLN02260 432 VFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL--LMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTG 509 (668)
T ss_pred EEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC--eEEEEcccceecCCcccccccCCCCCcCCCCCCCC
Confidence 999999864 3456778899999999999999999999987 57888999998742 134788887664556
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHH
Q 042406 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 308 (424)
+.|+.||+++|.++..+. +..++|+.++||.+... ...|+..++........ ..+..+++|++.
T Consensus 510 ~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~---~~nfv~~~~~~~~~~~v--------p~~~~~~~~~~~ 573 (668)
T PLN02260 510 SFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSN---PRNFITKISRYNKVVNI--------PNSMTVLDELLP 573 (668)
T ss_pred ChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCC---ccHHHHHHhccceeecc--------CCCceehhhHHH
Confidence 899999999999998874 34678888888643211 11455566655442211 124677888998
Q ss_pred HHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccc---cCC--CCCCcccccCChHH
Q 042406 309 GCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVL---PLP--RNGDVQFTHANISL 383 (424)
Q Consensus 309 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~---~~~--~~~~~~~~~~d~s~ 383 (424)
+++.+++... +++||+++++.+|+.|+++.+.+.++....+..+ ..+ .....+...+|++|
T Consensus 574 ~~~~l~~~~~--------------~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~~~~a~rp~~~l~~~k 639 (668)
T PLN02260 574 ISIEMAKRNL--------------RGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAKVIVAPRSNNEMDASK 639 (668)
T ss_pred HHHHHHHhCC--------------CceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhhHhhCCCccccccHHH
Confidence 8888876421 1699999999999999999999988522111111 111 11111222799999
Q ss_pred HHhHcCCcccCCHHHHHHHHHH
Q 042406 384 AQRELGYMPTTDLETGLKKFVR 405 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~ 405 (424)
++..+|. +. +++|+|.+++.
T Consensus 640 ~~~~~~~-~~-~~~~~l~~~~~ 659 (668)
T PLN02260 640 LKKEFPE-LL-SIKESLIKYVF 659 (668)
T ss_pred HHHhCcc-cc-chHHHHHHHHh
Confidence 9998998 55 89999988764
No 61
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.96 E-value=3e-27 Score=205.26 Aligned_cols=317 Identities=22% Similarity=0.231 Sum_probs=250.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhh---hhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKG---LLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..|..||||-+|.=|++|++.|+.+|++|.++.|.++.....+....-. .........+.+|++|...+.+++..++
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ik 106 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIK 106 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccC
Confidence 3467999999999999999999999999999999888776655443221 1123567889999999999999999999
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCC--eEEEecCCcccCCCCCCCCCCCCCCCCCCChHH
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP--AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYA 232 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~--~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~ 232 (424)
|+-|+|+|+..++..+.+-++.+-++...|+..|+++.+.++... +|...||+..||...+.|..|..|. .|.++|+
T Consensus 107 PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPF-yPRSPYa 185 (376)
T KOG1372|consen 107 PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPF-YPRSPYA 185 (376)
T ss_pred chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCC-CCCChhH
Confidence 999999999999988888889999999999999999998776432 8999999999998888899998876 8899999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEeccccC---CCCCCCCcHHHHHHHHH---cCCceeEEecCCCCccccccccHHHH
Q 042406 233 ATKKAGEAIAHAYNHIYGLSITGLRFFTVYG---PWGRPDMAYFFFTRDII---RGKRITVYEAPDGASVARDFTYIDDI 306 (424)
Q Consensus 233 ~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~v~Dv 306 (424)
++|..+--++..+.+.+++- .+-|.+|. |....+.....+.+.+. -|+.-.+. .|+.+..+||-|..|.
T Consensus 186 ~aKmy~~WivvNyREAYnmf---AcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~--LGNL~a~RDWGhA~dY 260 (376)
T KOG1372|consen 186 AAKMYGYWIVVNYREAYNMF---ACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIE--LGNLSALRDWGHAGDY 260 (376)
T ss_pred HhhhhheEEEEEhHHhhcce---eeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEE--ecchhhhcccchhHHH
Confidence 99999988888888877753 44455554 43332333333333332 23332222 1788999999999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccccccc-------------------
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP------------------- 367 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~------------------- 367 (424)
++|++.+++++.+ ..|.|..|+..|++|+++......|....+.-..
T Consensus 261 VEAMW~mLQ~d~P--------------dDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~k 326 (376)
T KOG1372|consen 261 VEAMWLMLQQDSP--------------DDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPK 326 (376)
T ss_pred HHHHHHHHhcCCC--------------CceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEeccc
Confidence 9999999998875 5799999999999999999999999655443110
Q ss_pred CCCCCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhccC
Q 042406 368 LPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 368 ~~~~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~~ 414 (424)
--++.+......|.+|+++.|||+|+.++++-+++++..-.+.++.+
T Consensus 327 YyRPtEVd~LqGdasKAk~~LgW~pkv~f~eLVkeMv~~DieLm~~n 373 (376)
T KOG1372|consen 327 YYRPTEVDTLQGDASKAKKTLGWKPKVTFPELVKEMVASDIELMKRN 373 (376)
T ss_pred ccCcchhhhhcCChHHHHHhhCCCCccCHHHHHHHHHHhHHHHHhhC
Confidence 11334455567899999999999999999999999998766655543
No 62
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.95 E-value=1.5e-26 Score=205.81 Aligned_cols=284 Identities=21% Similarity=0.217 Sum_probs=199.3
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEEc
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHL 161 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~~ 161 (424)
|+||||||+||++|+..|.+.||+|+++.|+........ ... +..-+.+.+.... ++|+|||+
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~---------~~~-------v~~~~~~~~~~~~-~~DavINL 63 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL---------HPN-------VTLWEGLADALTL-GIDAVINL 63 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc---------Ccc-------ccccchhhhcccC-CCCEEEEC
Confidence 689999999999999999999999999999765322211 111 1122334444442 45999999
Q ss_pred ccccCc--hhhccChHHHHHHHHHHHHHHHHHHHhcCCCC-eEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 162 AAQAGV--RYAMQNPNSYVESNIAGFVNLLETCKSSDPQP-AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 162 Ag~~~~--~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~-~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||..-. +++....+..++.-+..|..|.++..+...++ .+|..|..+.||...+..++|++++. .+.-+..-.+.
T Consensus 64 AG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g--~~Fla~lc~~W 141 (297)
T COG1090 64 AGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPG--DDFLAQLCQDW 141 (297)
T ss_pred CCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCC--CChHHHHHHHH
Confidence 997433 35555567899999999999999887554333 78888888999999999999997553 23344444555
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
|..+..... .|.|++.+|.|+|.|+.+. +++.+..-..-+.--.+ |++++.++|||++|+++++..++++..
T Consensus 142 E~~a~~a~~-~gtRvvllRtGvVLs~~GG---aL~~m~~~fk~glGG~~----GsGrQ~~SWIhieD~v~~I~fll~~~~ 213 (297)
T COG1090 142 EEEALQAQQ-LGTRVVLLRTGVVLSPDGG---ALGKMLPLFKLGLGGKL----GSGRQWFSWIHIEDLVNAILFLLENEQ 213 (297)
T ss_pred HHHHhhhhh-cCceEEEEEEEEEecCCCc---chhhhcchhhhccCCcc----CCCCceeeeeeHHHHHHHHHHHHhCcC
Confidence 666655433 4999999999999998654 22223222222222222 899999999999999999999999976
Q ss_pred ccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCC---CCCCcccccCChHHHH----hHcCCc
Q 042406 319 KSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP---RNGDVQFTHANISLAQ----RELGYM 391 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~---~~~~~~~~~~d~s~~~----~~LG~~ 391 (424)
-+ +.||++.+.|++.++|...+.+.++++......+.- --++.....++..|+. ...||+
T Consensus 214 ls-------------Gp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~ 280 (297)
T COG1090 214 LS-------------GPFNLTAPNPVRNKEFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQ 280 (297)
T ss_pred CC-------------CcccccCCCcCcHHHHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCe
Confidence 44 689999999999999999999999987644321100 0122223344443321 337888
Q ss_pred ccC-CHHHHHHHHHH
Q 042406 392 PTT-DLETGLKKFVR 405 (424)
Q Consensus 392 p~~-~l~~~l~~~v~ 405 (424)
.++ +++++|.+.+.
T Consensus 281 F~y~dl~~AL~~il~ 295 (297)
T COG1090 281 FQYPDLEEALADILK 295 (297)
T ss_pred eecCCHHHHHHHHHh
Confidence 775 79999887764
No 63
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.94 E-value=3.4e-25 Score=224.71 Aligned_cols=261 Identities=18% Similarity=0.207 Sum_probs=184.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEeCCCCchhhhHHH---HHh--------hhh-------ccCCeEEE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD---GVLGLDNFNNYYETSLKK---ARK--------GLL-------ERAGVFVI 136 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~---~~~--------~~~-------~~~~v~~~ 136 (424)
++|+|+|||||||||++|+++|++.+. +|+++.|..+........ ... +.. ...++..+
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v 197 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPV 197 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEE
Confidence 689999999999999999999998764 689999976533221111 000 000 13579999
Q ss_pred EccCCCH------HHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCccc
Q 042406 137 DADINDK------SLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVY 210 (424)
Q Consensus 137 ~~Dl~d~------~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vy 210 (424)
.+|++++ +..+.+.++ +|+|||+|+.... ..+++..+++|+.|+.+++++|++.+..++|||+||+++|
T Consensus 198 ~GDl~d~~LGLs~~~~~~L~~~--vDiVIH~AA~v~f---~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVy 272 (605)
T PLN02503 198 VGNVCESNLGLEPDLADEIAKE--VDVIINSAANTTF---DERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVN 272 (605)
T ss_pred EeeCCCcccCCCHHHHHHHHhc--CCEEEECcccccc---ccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceee
Confidence 9999987 345555564 5999999998653 2567889999999999999999887544589999999999
Q ss_pred CCCCC----CCCCCC--------------------C------------C---------------------CCCCCChHHH
Q 042406 211 GVNKK----VPFSEK--------------------D------------R---------------------TDQPASLYAA 233 (424)
Q Consensus 211 g~~~~----~~~~e~--------------------~------------~---------------------~~~~~~~Y~~ 233 (424)
|...+ .++... + . ...-.+.|..
T Consensus 273 G~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~ 352 (605)
T PLN02503 273 GQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVF 352 (605)
T ss_pred cCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHH
Confidence 86531 122100 0 0 0011278999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccC----------CCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYG----------PWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
||+.+|.++.+... +++++|+||+.|.+ ++.. ...+.++ .+..| .+..+. ++++...|+|+|
T Consensus 353 TK~lAE~lV~~~~~--~LPv~IvRPsiV~st~~eP~pGw~d~~~--~~~p~~~-~~g~G-~lr~~~--~~~~~~~DiVPV 424 (605)
T PLN02503 353 TKAMGEMVINSMRG--DIPVVIIRPSVIESTWKDPFPGWMEGNR--MMDPIVL-YYGKG-QLTGFL--ADPNGVLDVVPA 424 (605)
T ss_pred HHHHHHHHHHHhcC--CCCEEEEcCCEecccccCCccccccCcc--ccchhhh-heecc-ceeEEE--eCCCeeEeEEee
Confidence 99999999987653 89999999999944 3221 1112221 12223 233232 688999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC--CcccHHHHHHHHHHHhCc
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT--TPVPVSRLVSLLEKILKV 359 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~ 359 (424)
|.|+.+++.++....... ...+++||++++ +++++.|+++.+.+.+..
T Consensus 425 D~vvna~i~a~a~~~~~~--------~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 425 DMVVNATLAAMAKHGGAA--------KPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred cHHHHHHHHHHHhhhccc--------CCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 999999998854322110 023489999988 999999999999987764
No 64
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.94 E-value=7.3e-25 Score=206.25 Aligned_cols=236 Identities=18% Similarity=0.157 Sum_probs=171.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
.|++|||||+|+||++++++|+++|++|++++|+.+.... .... ...++.++++|++|.+++.+++++.
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~----~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDD----LKAR--YGDRLWVLQLDVTDSAAVRAVVDRAFAALG 75 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHh--ccCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999996432211 1111 1246889999999999998887652
Q ss_pred CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||....... .++.+..+++|+.|+.++++++ ++.+.+ +||++||.+.... .
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~-~iv~~sS~~~~~~------------~ 142 (276)
T PRK06482 76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGG-RIVQVSSEGGQIA------------Y 142 (276)
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEEcCcccccC------------C
Confidence 57999999998654322 2234578999999999999987 444544 8999999654321 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccc---cCCCCCCC-------C-cHHHHHHHHHcCCceeEEecC
Q 042406 226 QPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTV---YGPWGRPD-------M-AYFFFTRDIIRGKRITVYEAP 291 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v---~G~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~ 291 (424)
.+.+.|+.||++.|.+++.++++ +|++++++|||.+ ||++.... . ....+...+ ....+.+
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---- 217 (276)
T PRK06482 143 PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRAL-ADGSFAI---- 217 (276)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHH-hhccCCC----
Confidence 34688999999999999998876 5999999999988 55432211 1 111222222 2221111
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCc
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV 359 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~ 359 (424)
+.+++|++++++.++..... +..||+++++..+..|+++.+.+.++.
T Consensus 218 --------~~d~~~~~~a~~~~~~~~~~-------------~~~~~~g~~~~~~~~~~~~~~~~~~~~ 264 (276)
T PRK06482 218 --------PGDPQKMVQAMIASADQTPA-------------PRRLTLGSDAYASIRAALSERLAALEA 264 (276)
T ss_pred --------CCCHHHHHHHHHHHHcCCCC-------------CeEEecChHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999875432 157999999989999888888877764
No 65
>PRK12320 hypothetical protein; Provisional
Probab=99.94 E-value=1.1e-24 Score=223.29 Aligned_cols=236 Identities=18% Similarity=0.189 Sum_probs=170.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+||||++|+++|+++|++|++++|.... ....+++++.+|++|.. +.++++++ |+||
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~------------~~~~~ve~v~~Dl~d~~-l~~al~~~--D~VI 65 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD------------ALDPRVDYVCASLRNPV-LQELAGEA--DAVI 65 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh------------cccCCceEEEccCCCHH-HHHHhcCC--CEEE
Confidence 579999999999999999999999999999984321 11246889999999985 77777755 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
|+|+.... ....+|+.|+.|++++|++.++ ++||+||. +|.. ..|. .+|
T Consensus 66 HLAa~~~~--------~~~~vNv~Gt~nLleAA~~~Gv--RiV~~SS~--~G~~---------------~~~~----~aE 114 (699)
T PRK12320 66 HLAPVDTS--------APGGVGITGLAHVANAAARAGA--RLLFVSQA--AGRP---------------ELYR----QAE 114 (699)
T ss_pred EcCccCcc--------chhhHHHHHHHHHHHHHHHcCC--eEEEEECC--CCCC---------------cccc----HHH
Confidence 99986321 1235899999999999999885 69999986 3321 1122 356
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCC--CcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPD--MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
.++.. ++++++++|++++|||+.... .++..++.....++++ .++|++|++++++.+++..
T Consensus 115 ~ll~~----~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI-------------~vIyVdDvv~alv~al~~~ 177 (699)
T PRK12320 115 TLVST----GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPI-------------RVLHLDDLVRFLVLALNTD 177 (699)
T ss_pred HHHHh----cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCce-------------EEEEHHHHHHHHHHHHhCC
Confidence 55433 478999999999999965432 2334444443333332 2589999999999988753
Q ss_pred cccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCcccCCHH
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLE 397 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p~~~l~ 397 (424)
. +++|||++++.+|+.|+.+++...... .... ...+.....-|.+.++..++|.|+.+++
T Consensus 178 ~--------------~GiyNIG~~~~~Si~el~~~i~~~~p~-~~~~-----~~~~~~~~~pdi~~a~~~~~w~~~~~~~ 237 (699)
T PRK12320 178 R--------------NGVVDLATPDTTNVVTAWRLLRSVDPH-LRTR-----RVRSWEQLIPEVDIAAVQEDWNFEFGWQ 237 (699)
T ss_pred C--------------CCEEEEeCCCeeEHHHHHHHHHHhCCC-cccc-----ccccHHHhCCCCchhhhhcCCCCcchHH
Confidence 2 159999999999999999999776221 1111 1233334566777877889999998774
Q ss_pred H
Q 042406 398 T 398 (424)
Q Consensus 398 ~ 398 (424)
.
T Consensus 238 ~ 238 (699)
T PRK12320 238 A 238 (699)
T ss_pred H
Confidence 3
No 66
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.93 E-value=1.3e-24 Score=202.70 Aligned_cols=232 Identities=16% Similarity=0.129 Sum_probs=165.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|++|||||+|+||+++++.|+++|++|++++|+.+........... ....+.++++|++|.+++.+++++.
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINK---AGGKAIGVAMDVTNEDAVNAGIDKVAE 80 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHh---cCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999999976544433332221 1345788999999999999888764
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHH----HHHHHHHH-HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAG----FVNLLETC-KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g----~~~ll~a~-~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..+..+..+++|+.+ +.++++++ +..+.+ +||++||...+..
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~-~iv~~ss~~~~~~--------- 150 (262)
T PRK13394 81 RFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGG-VVIYMGSVHSHEA--------- 150 (262)
T ss_pred HcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCc-EEEEEcchhhcCC---------
Confidence 4799999999854322 123345688899999 66677777 555554 9999999654421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCce-------eEEecC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRI-------TVYEAP 291 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~ 291 (424)
..+...|+.+|.+.+.+++.++++ .+++++++|||.+++|..... +......... .++
T Consensus 151 ---~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~--- 218 (262)
T PRK13394 151 ---SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQ------IPEQAKELGISEEEVVKKVM--- 218 (262)
T ss_pred ---CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhh------hHhhhhccCCChHHHHHHHH---
Confidence 134578999999999999998876 389999999999999853211 1111000000 011
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+.+...++|++++|++++++.++...... .+|+.|++.++.
T Consensus 219 ~~~~~~~~~~~~~dva~a~~~l~~~~~~~----------~~g~~~~~~~g~ 259 (262)
T PRK13394 219 LGKTVDGVFTTVEDVAQTVLFLSSFPSAA----------LTGQSFVVSHGW 259 (262)
T ss_pred hcCCCCCCCCCHHHHHHHHHHHcCccccC----------CcCCEEeeCCce
Confidence 12334567999999999999998765321 234889988764
No 67
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.93 E-value=3e-24 Score=202.05 Aligned_cols=247 Identities=15% Similarity=0.093 Sum_probs=173.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||.++++.|+++|++|++++|+.+........... .....++.++.+|++|.+++.+++++.
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 83 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEA-LKGAGAVRYEPADVTDEDQVARAVDAATAW 83 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-ccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999965433222211111 111246889999999999998888754
Q ss_pred --CccEEEEcccccCc--h---hhccChHHHHHHHHHHHHHHHHHHHhcC---CCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGV--R---YAMQNPNSYVESNIAGFVNLLETCKSSD---PQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~--~---~~~~~~~~~~~~N~~g~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||.... . ...++....+++|+.++.++++++.+.. ...+||++||...+..
T Consensus 84 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~----------- 152 (276)
T PRK05875 84 HGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNT----------- 152 (276)
T ss_pred cCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCC-----------
Confidence 67999999996422 1 1122345688999999999888765432 1238999999877542
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
..+.+.|+.+|++.|.+++.+.+++ ++++++||||.+.++..............+....+ ...+
T Consensus 153 -~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~ 219 (276)
T PRK05875 153 -HRWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP------------LPRV 219 (276)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC------------CCCC
Confidence 1345789999999999999998765 69999999999987643211100111112221111 1236
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc----cHHHHHHHHHHHhC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV----PVSRLVSLLEKILK 358 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----s~~el~~~i~~~~g 358 (424)
++++|+|++++.++..+... ..+++|+++++..+ +..|+++.+.+..+
T Consensus 220 ~~~~dva~~~~~l~~~~~~~----------~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 220 GEVEDVANLAMFLLSDAASW----------ITGQVINVDGGHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred cCHHHHHHHHHHHcCchhcC----------cCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence 78999999999998775421 23489999998776 66777776665544
No 68
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.93 E-value=2.6e-25 Score=205.94 Aligned_cols=218 Identities=18% Similarity=0.205 Sum_probs=132.3
Q ss_pred EEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhh--------h---hccCCeEEEEccCCCH------H
Q 042406 84 VTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKG--------L---LERAGVFVIDADINDK------S 144 (424)
Q Consensus 84 ItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~--------~---~~~~~v~~~~~Dl~d~------~ 144 (424)
|||||||||++|+++|++++. +|+|+.|..+...... ..... . ....+++++.+|++++ +
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~-rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~ 79 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALE-RLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDE 79 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHH-HHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchh-hhhhhcccccchhhhhhhhhccEEEEeccccccccCCChH
Confidence 799999999999999999987 9999999775422211 11100 0 1267999999999974 4
Q ss_pred HHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCC------C
Q 042406 145 LLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP------F 218 (424)
Q Consensus 145 ~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~------~ 218 (424)
...++.+++ |+|||||+.++.. .+.+...++|+.||.++++.|.+...+ +|+|+||+.+.+...... .
T Consensus 80 ~~~~L~~~v--~~IiH~Aa~v~~~---~~~~~~~~~NV~gt~~ll~la~~~~~~-~~~~iSTa~v~~~~~~~~~~~~~~~ 153 (249)
T PF07993_consen 80 DYQELAEEV--DVIIHCAASVNFN---APYSELRAVNVDGTRNLLRLAAQGKRK-RFHYISTAYVAGSRPGTIEEKVYPE 153 (249)
T ss_dssp HHHHHHHH----EEEE--SS-SBS----S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS-TTT--SSS-HH
T ss_pred Hhhcccccc--ceeeecchhhhhc---ccchhhhhhHHHHHHHHHHHHHhccCc-ceEEeccccccCCCCCccccccccc
Confidence 667777777 9999999987643 344568899999999999999977665 999999955555433211 1
Q ss_pred CCC--CCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC----CCCcHHHHHHHHHcCCceeEEecCC
Q 042406 219 SEK--DRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR----PDMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 219 ~e~--~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
.+. +......+.|.+||+.+|.+++++.++.|++++|+|||.|+|.... .......++......+.++.. ++
T Consensus 154 ~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~--~~ 231 (249)
T PF07993_consen 154 EEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDL--PG 231 (249)
T ss_dssp H--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES---SB
T ss_pred ccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccc--cC
Confidence 111 1122344789999999999999999888999999999999994321 122233333333333333322 14
Q ss_pred CCccccccccHHHHHHHH
Q 042406 293 GASVARDFTYIDDIVKGC 310 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~ 310 (424)
..+...|+++||.+|+++
T Consensus 232 ~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 232 DPDARLDLVPVDYVARAI 249 (249)
T ss_dssp ---TT--EEEHHHHHHHH
T ss_pred CCCceEeEECHHHHHhhC
Confidence 456679999999999986
No 69
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.93 E-value=7.1e-24 Score=197.70 Aligned_cols=226 Identities=16% Similarity=0.148 Sum_probs=159.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.. ......... .....+.++.+|++|.+++.++++..
T Consensus 5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (260)
T PRK12823 5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELR---AAGGEALALTADLETYAGAQAAMAAAVE 80 (260)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHH---hcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999632 111111111 11346789999999999988887754
Q ss_pred ---CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHH----HHHHhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLL----ETCKSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll----~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.... ....++.+..+++|+.++..++ +.+++.+.+ +||++||...++.
T Consensus 81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~~sS~~~~~~--------- 150 (260)
T PRK12823 81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGG-AIVNVSSIATRGI--------- 150 (260)
T ss_pred HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-eEEEEcCccccCC---------
Confidence 68999999985321 1122334567899999876554 444455544 8999999877642
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCC-----------CCCcHHHHHHHHHcCCceeE
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGR-----------PDMAYFFFTRDIIRGKRITV 287 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~-----------~~~~~~~~~~~~~~~~~~~~ 287 (424)
+...|+.||++.+.+++.++.++ |+++++|+||.|++|... .....+.+...+..+.++..
T Consensus 151 -----~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (260)
T PRK12823 151 -----NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKR 225 (260)
T ss_pred -----CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCccc
Confidence 23579999999999999998775 899999999999997311 01112233333333333222
Q ss_pred EecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 288 YEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 288 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+.+++|+|++++.++...... ..|++|++.+|+
T Consensus 226 ------------~~~~~dva~~~~~l~s~~~~~----------~~g~~~~v~gg~ 258 (260)
T PRK12823 226 ------------YGTIDEQVAAILFLASDEASY----------ITGTVLPVGGGD 258 (260)
T ss_pred ------------CCCHHHHHHHHHHHcCccccc----------ccCcEEeecCCC
Confidence 457899999999888654321 344899998765
No 70
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.93 E-value=1.4e-24 Score=205.26 Aligned_cols=254 Identities=15% Similarity=0.104 Sum_probs=175.9
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc----cC-c
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV----VA-F 155 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~----~~-~ 155 (424)
+|+||||||+||++++++|+++|++|++++|+.++. ...+++.+.+|+.|++++.++++. .+ +
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~------------~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~ 68 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS------------AGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEI 68 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc------------cCCCCccccccCCCHHHHHHHHhcccCcCCce
Confidence 489999999999999999999999999999976532 123677788999999999999942 12 5
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHH
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK 235 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK 235 (424)
|.|+|+++... + ....+.+++++|++.+++ +||++||..++.. . ..+
T Consensus 69 d~v~~~~~~~~------~-------~~~~~~~~i~aa~~~gv~-~~V~~Ss~~~~~~-------------~------~~~ 115 (285)
T TIGR03649 69 SAVYLVAPPIP------D-------LAPPMIKFIDFARSKGVR-RFVLLSASIIEKG-------------G------PAM 115 (285)
T ss_pred eEEEEeCCCCC------C-------hhHHHHHHHHHHHHcCCC-EEEEeeccccCCC-------------C------chH
Confidence 99999986421 1 012456899999999986 9999998655321 0 012
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhh
Q 042406 236 KAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315 (424)
Q Consensus 236 ~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 315 (424)
...|.++++. .|++++++||+.+|+..... .+...+.....+.. +.++..++||+++|+|++++.++.
T Consensus 116 ~~~~~~l~~~---~gi~~tilRp~~f~~~~~~~-----~~~~~~~~~~~~~~----~~g~~~~~~v~~~Dva~~~~~~l~ 183 (285)
T TIGR03649 116 GQVHAHLDSL---GGVEYTVLRPTWFMENFSEE-----FHVEAIRKENKIYS----ATGDGKIPFVSADDIARVAYRALT 183 (285)
T ss_pred HHHHHHHHhc---cCCCEEEEeccHHhhhhccc-----ccccccccCCeEEe----cCCCCccCcccHHHHHHHHHHHhc
Confidence 2233333321 38999999999998653111 11122333333322 346778999999999999999988
Q ss_pred hccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCC-------CCCcc-------------
Q 042406 316 TAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR-------NGDVQ------------- 375 (424)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-------~~~~~------------- 375 (424)
.+.. .+++|++++++.+|+.|+++.+.+.+|++......+... .+...
T Consensus 184 ~~~~------------~~~~~~l~g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~ 251 (285)
T TIGR03649 184 DKVA------------PNTDYVVLGPELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAV 251 (285)
T ss_pred CCCc------------CCCeEEeeCCccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 7542 237899999999999999999999999987665543211 00000
Q ss_pred ---cccCChHHHHhHcCCcccCCHHHHHHHHH
Q 042406 376 ---FTHANISLAQRELGYMPTTDLETGLKKFV 404 (424)
Q Consensus 376 ---~~~~d~s~~~~~LG~~p~~~l~~~l~~~v 404 (424)
.....+...++.+|..|+ ++++.+++..
T Consensus 252 ~~g~~~~~~~~~~~~~G~~p~-~~~~~~~~~~ 282 (285)
T TIGR03649 252 KNGAEVRLNDVVKAVTGSKPR-GFRDFAESNK 282 (285)
T ss_pred hCCccccccchHHHHhCcCCc-cHHHHHHHhh
Confidence 001124455666888787 7888776653
No 71
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.93 E-value=5.5e-24 Score=197.19 Aligned_cols=229 Identities=17% Similarity=0.176 Sum_probs=166.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++..
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (250)
T PRK07774 3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVA---DGGTAIAVQVDVSDPDSAKAMADATVS 79 (250)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999975433222111111 1236788999999999998888754
Q ss_pred ---CccEEEEcccccCc-------hhhccChHHHHHHHHHHHHHHHHHHHhcC---CCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-------RYAMQNPNSYVESNIAGFVNLLETCKSSD---PQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||.... ....++.+..+++|+.++.++++++.+.. ..++||++||...|.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~--------- 150 (250)
T PRK07774 80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL--------- 150 (250)
T ss_pred HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---------
Confidence 57999999997531 11223345689999999999888876531 124899999987763
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
+.+.|+.||++.|.+++.+++++ ++++++++||.+.++..... ....+...+..+.+...
T Consensus 151 ------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~~---------- 213 (250)
T PRK07774 151 ------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV-TPKEFVADMVKGIPLSR---------- 213 (250)
T ss_pred ------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc-CCHHHHHHHHhcCCCCC----------
Confidence 34679999999999999998775 79999999999988754321 12234444444433221
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
+.+++|+|++++.++...... ..+++|++.++..++
T Consensus 214 --~~~~~d~a~~~~~~~~~~~~~----------~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 214 --MGTPEDLVGMCLFLLSDEASW----------ITGQIFNVDGGQIIR 249 (250)
T ss_pred --CcCHHHHHHHHHHHhChhhhC----------cCCCEEEECCCeecc
Confidence 456899999999988764321 234899999886543
No 72
>PRK09135 pteridine reductase; Provisional
Probab=99.93 E-value=4.8e-24 Score=197.28 Aligned_cols=232 Identities=14% Similarity=0.069 Sum_probs=162.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
..+++|+||||+|+||++++++|+++|++|++++|+.....+...... .......+.++.+|++|.+++.++++..
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 82 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAEL-NALRPGSAAALQADLLDPDALPELVAACVAA 82 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH-HhhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999986532222111111 1112245889999999999999988864
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD--PQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||...... ...+.+..+++|+.|+.++++++.+.- ....++++||.... . +.
T Consensus 83 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~ 150 (249)
T PRK09135 83 FGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE-----------R-PL 150 (249)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc-----------C-CC
Confidence 5799999999754321 123356789999999999999986421 12256666653221 1 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
.+...|+.||+++|.+++.++.++ +++++++|||.++||.... .+...+......+.++.. +.++
T Consensus 151 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------~~~~ 217 (249)
T PRK09135 151 KGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGN-SFDEEARQAILARTPLKR------------IGTP 217 (249)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccc-cCCHHHHHHHHhcCCcCC------------CcCH
Confidence 567899999999999999998875 6999999999999997543 222233333333332211 2358
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
+|+|+++..++..... ..|++|+++++..++
T Consensus 218 ~d~a~~~~~~~~~~~~-----------~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 218 EDIAEAVRFLLADASF-----------ITGQILAVDGGRSLT 248 (249)
T ss_pred HHHHHHHHHHcCcccc-----------ccCcEEEECCCeecc
Confidence 9999999766653221 234899999987654
No 73
>PRK06128 oxidoreductase; Provisional
Probab=99.93 E-value=1e-23 Score=200.87 Aligned_cols=233 Identities=13% Similarity=0.108 Sum_probs=166.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhh-hHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET-SLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.+++|++|||||+|+||+++++.|+++|++|++..+..+.... ...... . ....++.++.+|++|.++++++++++
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 129 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLI-Q-AEGRKAVALPGDLKDEAFCRQLVERAV 129 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHH-H-HcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999999988775432111 111111 1 12346789999999999998888764
Q ss_pred ----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.... ...+||++||...|...
T Consensus 130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~---------- 199 (300)
T PRK06128 130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS---------- 199 (300)
T ss_pred HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC----------
Confidence 689999999974321 1233456799999999999999987542 12489999998887531
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.....|+.||.+.+.+++.++.+. |+++++|+||.|.+|..............+....+ ...+
T Consensus 200 --~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p------------~~r~ 265 (300)
T PRK06128 200 --PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP------------MKRP 265 (300)
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC------------CCCC
Confidence 334679999999999999998764 89999999999999854321111222222222111 1236
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
.+.+|+|.+++.++...... ..|++|++.+|..+
T Consensus 266 ~~p~dva~~~~~l~s~~~~~----------~~G~~~~v~gg~~~ 299 (300)
T PRK06128 266 GQPVEMAPLYVLLASQESSY----------VTGEVFGVTGGLLL 299 (300)
T ss_pred cCHHHHHHHHHHHhCccccC----------ccCcEEeeCCCEeC
Confidence 68899999999887654321 33489999987654
No 74
>PRK06194 hypothetical protein; Provisional
Probab=99.93 E-value=1.2e-24 Score=206.04 Aligned_cols=252 Identities=13% Similarity=0.092 Sum_probs=173.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|++|||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++..
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~ 79 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRA---QGAEVLGVRTDVSDAAQVEALADAALE 79 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999965443332222111 1346888999999999999988764
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHH----HHhcCCC-----CeEEEecCCcccCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLET----CKSSDPQ-----PAIVWASSSSVYGVNKKVP 217 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~-----~~~v~~SS~~vyg~~~~~~ 217 (424)
++|+||||||...... ..++.+..+++|+.|+.+++++ +.+.+.+ .++|++||.+.+...
T Consensus 80 ~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---- 155 (287)
T PRK06194 80 RFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP---- 155 (287)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC----
Confidence 5799999999865422 1233456799999999887666 4444431 389999998776431
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-----CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCC
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-----GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
.+...|+.+|++.+.+++.++.++ ++++++++||.|..+-. ....+.+..++ +
T Consensus 156 --------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~-----------~~~~~~~~~~~---~ 213 (287)
T PRK06194 156 --------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIW-----------QSERNRPADLA---N 213 (287)
T ss_pred --------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccc-----------cccccCchhcc---c
Confidence 345789999999999999988765 47888888887765421 12233444444 4
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCC
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNG 372 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~ 372 (424)
++...++|++++|++.+.... . .++..|+++.+.+.+.........+.....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~--------------------~--------~~s~~dva~~i~~~~~~~~~~~~~~~~~~~ 265 (287)
T PRK06194 214 TAPPTRSQLIAQAMSQKAVGS--------------------G--------KVTAEEVAQLVFDAIRAGRFYIYSHPQALA 265 (287)
T ss_pred CccccchhhHHHHHHHhhhhc--------------------c--------CCCHHHHHHHHHHHHHcCCeEEEcCHHHHH
Confidence 567788888888887764210 0 168888888888876543333322222233
Q ss_pred CcccccCChHHH
Q 042406 373 DVQFTHANISLA 384 (424)
Q Consensus 373 ~~~~~~~d~s~~ 384 (424)
+......|.+++
T Consensus 266 ~~~~~~~~~~~~ 277 (287)
T PRK06194 266 SVRTRMEDIVQQ 277 (287)
T ss_pred HHHHHHHHHHHh
Confidence 333444555555
No 75
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.93 E-value=1.1e-23 Score=194.56 Aligned_cols=229 Identities=17% Similarity=0.123 Sum_probs=166.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
..+|+||||||+|+||++|+++|+++|++|+++.|.............. ....++.++.+|+.|.+++.+++++.
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVE--ALGRRAQAVQADVTDKAALEAAVAAAVER 81 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH--hcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence 4568999999999999999999999999998888765432222111111 12356889999999999999888764
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+|||+||...... ...+.+..+++|+.++.++++.+ ++.+.+ +||++||.+.+...
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~i~~SS~~~~~~~---------- 150 (249)
T PRK12825 82 FGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGG-RIVNISSVAGLPGW---------- 150 (249)
T ss_pred cCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEECccccCCCC----------
Confidence 6799999999754322 22334678999999999888876 445544 99999998776421
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.+...|+.+|.+.+.+++.++++ .+++++++|||.++|+...... ....... .... ....+
T Consensus 151 --~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~-~~~~~~~---~~~~----------~~~~~ 214 (249)
T PRK12825 151 --PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATI-EEAREAK---DAET----------PLGRS 214 (249)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCcccccc-chhHHhh---hccC----------CCCCC
Confidence 34578999999999999988765 4899999999999998654321 1111110 0011 12238
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
++.+|+++++..++...... ..|++|+++++..+
T Consensus 215 ~~~~dva~~~~~~~~~~~~~----------~~g~~~~i~~g~~~ 248 (249)
T PRK12825 215 GTPEDIARAVAFLCSDASDY----------ITGQVIEVTGGVDV 248 (249)
T ss_pred cCHHHHHHHHHHHhCccccC----------cCCCEEEeCCCEee
Confidence 99999999999998764321 34589999987643
No 76
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.93 E-value=9.1e-24 Score=196.42 Aligned_cols=232 Identities=13% Similarity=0.097 Sum_probs=166.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|++|||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++++
T Consensus 7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (255)
T PRK07523 7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKG---QGLSAHALAFDVTDHDAVRAAIDAFEA 83 (255)
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh---cCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999976543332222211 1245889999999999999998765
Q ss_pred ---CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||....... .++.+..+.+|+.++.++++++.+. +. ++||++||......
T Consensus 84 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~~---------- 152 (255)
T PRK07523 84 EIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGA-GKIINIASVQSALA---------- 152 (255)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCC-eEEEEEccchhccC----------
Confidence 57999999998543222 2223568889999999998887653 33 38999999654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|+.+|.+.+.+++.++.+ +|+++++|+||.+.++..........+...+....+ ...
T Consensus 153 --~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~------------~~~ 218 (255)
T PRK07523 153 --RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP------------AGR 218 (255)
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC------------CCC
Confidence 134578999999999999999864 489999999999998843211101122222222221 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
+..++|+|.+++.++...... ..|+++++.+|...|
T Consensus 219 ~~~~~dva~~~~~l~~~~~~~----------~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 219 WGKVEELVGACVFLASDASSF----------VNGHVLYVDGGITAS 254 (255)
T ss_pred CcCHHHHHHHHHHHcCchhcC----------ccCcEEEECCCeecc
Confidence 678999999999998764321 334889998876544
No 77
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.93 E-value=1.2e-23 Score=194.78 Aligned_cols=229 Identities=15% Similarity=0.103 Sum_probs=166.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++.+|+|+||||+|+||.+++++|+++|++|++++|+.+.......... .....+.++.+|++|.+++.++++++
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVE---AAGGKARARQVDVRDRAALKAAVAAGVE 79 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999997543322222111 11235889999999999999998764
Q ss_pred ---CccEEEEcccccCc----hhhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV----RYAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+|||+||.... .....+.+..+.+|+.++.++++++. +.+. ++||++||...++.
T Consensus 80 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~ii~~ss~~~~~~---------- 148 (251)
T PRK12826 80 DFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGG-GRIVLTSSVAGPRV---------- 148 (251)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-cEEEEEechHhhcc----------
Confidence 57999999988654 22233456789999999999988774 3444 48999999877621
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
...+...|+.+|.+.+.+++.++.+. +++++++|||.++||...... ...+...+....++ ..
T Consensus 149 -~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~-~~~~~~~~~~~~~~------------~~ 214 (251)
T PRK12826 149 -GYPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLG-DAQWAEAIAAAIPL------------GR 214 (251)
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcC-chHHHHHHHhcCCC------------CC
Confidence 11345789999999999999987653 899999999999998643211 11112222222111 14
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+++++|+|.+++.++...... ..|++|++.+|.
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~----------~~g~~~~~~~g~ 247 (251)
T PRK12826 215 LGEPEDIAAAVLFLASDEARY----------ITGQTLPVDGGA 247 (251)
T ss_pred CcCHHHHHHHHHHHhCccccC----------cCCcEEEECCCc
Confidence 889999999999887654321 344899998765
No 78
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.92 E-value=1.3e-24 Score=202.35 Aligned_cols=234 Identities=16% Similarity=0.120 Sum_probs=166.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+.+|+++||||+|+||.++++.|+++|++|++++|+.+....... . . ...+.++.+|++|.+++.++++.+
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~----~-~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAAL----E-I-GPAAIAVSLDVTRQDSIDRIVAAAVE 76 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----H-h-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999996543322211 1 1 235889999999999999888764
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC----CCCeEEEecCCc-ccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD----PQPAIVWASSSS-VYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~----~~~~~v~~SS~~-vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.... ...+||++||.. .++.
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 147 (257)
T PRK07067 77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE--------- 147 (257)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC---------
Confidence 6899999999754321 223456789999999999998886432 223899999954 3331
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHc---CCceeEEecCCCCc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIR---GKRITVYEAPDGAS 295 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 295 (424)
.+...|+.||.+.+.+++.++.+ .|+++++|+||.++++..... .. ....... +.....+ +...
T Consensus 148 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~--~~-~~~~~~~~~~~~~~~~~---~~~~ 217 (257)
T PRK07067 148 ----ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQV--DA-LFARYENRPPGEKKRLV---GEAV 217 (257)
T ss_pred ----CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhh--hh-hhhhccCCCHHHHHHHH---hhcC
Confidence 35678999999999999998875 489999999999999743211 00 0000000 0000001 1223
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
....+++++|+|++++.++...... ..|++|++.+|..+
T Consensus 218 ~~~~~~~~~dva~~~~~l~s~~~~~----------~~g~~~~v~gg~~~ 256 (257)
T PRK07067 218 PLGRMGVPDDLTGMALFLASADADY----------IVAQTYNVDGGNWM 256 (257)
T ss_pred CCCCccCHHHHHHHHHHHhCccccc----------ccCcEEeecCCEeC
Confidence 3456999999999999988765322 34589999988654
No 79
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.92 E-value=2e-23 Score=196.29 Aligned_cols=245 Identities=13% Similarity=0.095 Sum_probs=168.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||+++++.|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++++
T Consensus 3 ~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (275)
T PRK05876 3 GFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRA---EGFDVHGVMCDVRHREEVTHLADEAFR 79 (275)
T ss_pred CcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEeCCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999876543332222111 1235788999999999999888765
Q ss_pred ---CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||....... .++.+..+++|+.|+.++++++. +.+.+++||++||...+..
T Consensus 80 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~---------- 149 (275)
T PRK05876 80 LLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP---------- 149 (275)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC----------
Confidence 58999999998543222 22335688999999998888764 3443348999999877642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|+.||.+.+.+.+.++.++ |+++++|+||.+.++...... ...............+ +.....++
T Consensus 150 --~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~ 222 (275)
T PRK05876 150 --NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSE--RIRGAACAQSSTTGSP---GPLPLQDD 222 (275)
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchh--hhcCcccccccccccc---cccccccc
Confidence 1456789999999888888777554 899999999999887432110 0000000000111111 22334567
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILK 358 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g 358 (424)
+++++|+|++++.++.+. +.|.+.+ +....++.+...+...
T Consensus 223 ~~~~~dva~~~~~ai~~~----------------~~~~~~~--~~~~~~~~~~~~~~~~ 263 (275)
T PRK05876 223 NLGVDDIAQLTADAILAN----------------RLYVLPH--AASRASIRRRFERIDR 263 (275)
T ss_pred CCCHHHHHHHHHHHHHcC----------------CeEEecC--hhhHHHHHHHHHHHHH
Confidence 899999999999998754 3455542 3455666666655543
No 80
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.92 E-value=1.3e-23 Score=197.56 Aligned_cols=238 Identities=15% Similarity=0.137 Sum_probs=171.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
.+|+|+||||+|+||++++++|+++|++|++++|+.+..... .. .....+.++++|++|.+++.++++.+
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADL----AE--KYGDRLLPLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HH--hccCCeeEEEccCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999965432211 11 11346788999999999998887764
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+++|+.++.++++++ ++.+.+ ++|++||.+.+...
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vsS~~~~~~~----------- 143 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSG-HIIQISSIGGISAF----------- 143 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEcChhhcCCC-----------
Confidence 6799999999865422 22345678999999987777765 455554 89999997776531
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCC-------cHHHHHHHHHcCCceeEEecCCCC
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDM-------AYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
.....|+.+|++.+.+++.++.+ .|++++++|||.+.++...... ....+...+.. .
T Consensus 144 -~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 210 (275)
T PRK08263 144 -PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE------------Q 210 (275)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH------------H
Confidence 33478999999999999998875 5899999999998876432110 01111111111 1
Q ss_pred cccccc-ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhC
Q 042406 295 SVARDF-TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILK 358 (424)
Q Consensus 295 ~~~~~~-i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g 358 (424)
.....+ ++++|++++++.+++.+.. .++.|+..++..+++.++.+.+.+..+
T Consensus 211 ~~~~~~~~~p~dva~~~~~l~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 211 WSERSVDGDPEAAAEALLKLVDAENP------------PLRLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred HHhccCCCCHHHHHHHHHHHHcCCCC------------CeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence 112235 8899999999999987642 225555555678999999999988644
No 81
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.92 E-value=1.3e-23 Score=190.26 Aligned_cols=208 Identities=16% Similarity=0.134 Sum_probs=163.2
Q ss_pred CCCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 73 RPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 73 ~~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
+.++.+|++||||||++++|+.++.+|+++|..++++|.+.+...+..+..+.. ..++.+.||++|.+.+.+..++
T Consensus 32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~----g~~~~y~cdis~~eei~~~a~~ 107 (300)
T KOG1201|consen 32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI----GEAKAYTCDISDREEIYRLAKK 107 (300)
T ss_pred chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc----CceeEEEecCCCHHHHHHHHHH
Confidence 466789999999999999999999999999999999999998888877766654 3799999999999999988877
Q ss_pred c-----CccEEEEcccccCchhhccCh----HHHHHHHHHHH----HHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGVRYAMQNP----NSYVESNIAGF----VNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~~~~~~~----~~~~~~N~~g~----~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
+ ++|++|||||++......+.+ +.++++|+.|. ++++..+.+.+.+ ++|.++|+..+-.
T Consensus 108 Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~G-HIV~IaS~aG~~g------- 179 (300)
T KOG1201|consen 108 VKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNG-HIVTIASVAGLFG------- 179 (300)
T ss_pred HHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCc-eEEEehhhhcccC-------
Confidence 6 689999999998765433332 46899999995 5567777777765 8998888655432
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh------CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCC
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY------GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
.....+|++||+++..+.+++..+. |++++.++|+.+=.. ++.. ..+.
T Consensus 180 -----~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tg----------mf~~---~~~~-------- 233 (300)
T KOG1201|consen 180 -----PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTG----------MFDG---ATPF-------- 233 (300)
T ss_pred -----CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecccc----------ccCC---CCCC--------
Confidence 1456889999999988888887553 799999999987532 1111 1111
Q ss_pred CccccccccHHHHHHHHHHHhhhccc
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
......+..+.+|+.++.++.....
T Consensus 234 -~~l~P~L~p~~va~~Iv~ai~~n~~ 258 (300)
T KOG1201|consen 234 -PTLAPLLEPEYVAKRIVEAILTNQA 258 (300)
T ss_pred -ccccCCCCHHHHHHHHHHHHHcCCc
Confidence 2234578889999999999887653
No 82
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.92 E-value=1.6e-23 Score=194.83 Aligned_cols=230 Identities=17% Similarity=0.150 Sum_probs=161.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+|+||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++..
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQK---AGGKAIGVAMDVTDEEAINAGIDYAVET 78 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999976543332221111 2356889999999999999888754
Q ss_pred --CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHH----HHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNL----LETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~l----l~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||....... .++.+..+++|+.++.++ ++++++.+.+ +||++||...+..
T Consensus 79 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~iss~~~~~~----------- 146 (258)
T PRK12429 79 FGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGG-RIINMASVHGLVG----------- 146 (258)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCe-EEEEEcchhhccC-----------
Confidence 57999999997544322 222356788999995544 5555555554 8999999765432
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCcee-------EEecCCC
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRIT-------VYEAPDG 293 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 293 (424)
..+.+.|+.+|.+.+.+++.++.+. +++++++|||.+++|..... +.......... .+ ..
T Consensus 147 -~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~ 216 (258)
T PRK12429 147 -SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ------IPDLAKERGISEEEVLEDVL---LP 216 (258)
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh------hhhhccccCCChHHHHHHHH---hc
Confidence 1346789999999999999887654 79999999999999853211 11111000000 00 11
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
....+++++++|+|++++.++...... ..++.|++.+|
T Consensus 217 ~~~~~~~~~~~d~a~~~~~l~~~~~~~----------~~g~~~~~~~g 254 (258)
T PRK12429 217 LVPQKRFTTVEEIADYALFLASFAAKG----------VTGQAWVVDGG 254 (258)
T ss_pred cCCccccCCHHHHHHHHHHHcCccccC----------ccCCeEEeCCC
Confidence 223457999999999999988764321 23488998876
No 83
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.92 E-value=4.8e-23 Score=190.88 Aligned_cols=229 Identities=14% Similarity=0.068 Sum_probs=160.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-eCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+++|+++||||+|+||++++++|+++|++|+++ +|+....+....... ....++.++.+|++|++++.++++++
T Consensus 2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (250)
T PRK08063 2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIE---ALGRKALAVKANVGDVEKIKEMFAQIDE 78 (250)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH---hcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999998774 665433222211111 12346889999999999999988865
Q ss_pred ---CccEEEEcccccCchhhcc----ChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYAMQ----NPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~~~----~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||........+ +.+..+.+|+.++.++++++.+ .+. ++||++||...+..
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~~sS~~~~~~---------- 147 (250)
T PRK08063 79 EFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGG-GKIISLSSLGSIRY---------- 147 (250)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-eEEEEEcchhhccC----------
Confidence 5899999999754322222 2245788999999888887764 333 39999999655431
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|+.+|.+.|.+++.++.+ .|+++++|+||.+.++..........+........+ ...
T Consensus 148 --~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~ 213 (250)
T PRK08063 148 --LENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTP------------AGR 213 (250)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCC------------CCC
Confidence 134578999999999999998866 389999999999987643210001112212111110 113
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+++.+|+|++++.++..+... ..|+.+++.+|..
T Consensus 214 ~~~~~dva~~~~~~~~~~~~~----------~~g~~~~~~gg~~ 247 (250)
T PRK08063 214 MVEPEDVANAVLFLCSPEADM----------IRGQTIIVDGGRS 247 (250)
T ss_pred CcCHHHHHHHHHHHcCchhcC----------ccCCEEEECCCee
Confidence 788999999999988765422 2348899888764
No 84
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.92 E-value=2.4e-23 Score=193.43 Aligned_cols=232 Identities=17% Similarity=0.124 Sum_probs=161.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|++|||||+|+||++++++|+++|++|++++|+.+.......... ....++.++.+|+.|.+++.++++..
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVAT---DAGGSVIYLVADVTKEDEIADMIAAAAAEFG 77 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999999997543322211111 12346889999999999888777654
Q ss_pred CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+|||+||....... ..+.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 78 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~-~~v~~ss~~~~~~~------------ 144 (255)
T TIGR01963 78 GLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWG-RIINIASAHGLVAS------------ 144 (255)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCe-EEEEEcchhhcCCC------------
Confidence 47999999997653221 2223567889999988777766 455554 89999997665421
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEe----cCCCCcccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYE----APDGASVAR 298 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 298 (424)
.....|+.+|.+.+.+++.++.+. +++++++|||.+++|.... .+............. ........+
T Consensus 145 ~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (255)
T TIGR01963 145 PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK------QIADQAKTRGIPEEQVIREVMLPGQPTK 218 (255)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH------HHHhhhcccCCCchHHHHHHHHccCccc
Confidence 234789999999999999887653 8999999999999984211 111111111110000 001233456
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
++++++|+|++++.++.+.... ..+++|++.++.
T Consensus 219 ~~~~~~d~a~~~~~~~~~~~~~----------~~g~~~~~~~g~ 252 (255)
T TIGR01963 219 RFVTVDEVAETALFLASDAAAG----------ITGQAIVLDGGW 252 (255)
T ss_pred cCcCHHHHHHHHHHHcCccccC----------ccceEEEEcCcc
Confidence 7999999999999999864321 234899998764
No 85
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.92 E-value=5.1e-23 Score=181.51 Aligned_cols=211 Identities=15% Similarity=0.121 Sum_probs=155.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
..++|.++|||||++||.++++.|++.|++|++..|..++++....+.. ...+.++..|++|.+++.++++..
T Consensus 3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~-----~~~~~~~~~DVtD~~~~~~~i~~~~~ 77 (246)
T COG4221 3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIG-----AGAALALALDVTDRAAVEAAIEALPE 77 (246)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhc-----cCceEEEeeccCCHHHHHHHHHHHHH
Confidence 4567899999999999999999999999999999997766554433322 257899999999999977766543
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|++|||||...... ..++.+.++++|+.|+.+..++ +.+.+.+ +||++||.+.--
T Consensus 78 ~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G-~IiN~~SiAG~~----------- 145 (246)
T COG4221 78 EFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSG-HIINLGSIAGRY----------- 145 (246)
T ss_pred hhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCc-eEEEeccccccc-----------
Confidence 5899999999875421 2334567999999997666554 5556655 999999965421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC--CCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP--DMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
+....+.|+++|++...+...+.++. ++|++.|.||.+-....+. +.--........ ..
T Consensus 146 -~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y---------------~~ 209 (246)
T COG4221 146 -PYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVY---------------KG 209 (246)
T ss_pred -cCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHh---------------cc
Confidence 22445889999999999999998775 8999999999985431110 000000111111 12
Q ss_pred cccccHHHHHHHHHHHhhhccc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
...+..+|+|++++.+++.|..
T Consensus 210 ~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 210 GTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred CCCCCHHHHHHHHHHHHhCCCc
Confidence 2478899999999999999875
No 86
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.92 E-value=8.5e-23 Score=190.11 Aligned_cols=236 Identities=18% Similarity=0.090 Sum_probs=170.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||..+++.|+++|++|++++|+.+..+..... ....++.++.+|+.|.+++.+++++.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 76 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADA-----LGDARFVPVACDLTDAASLAAALANAAAERG 76 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----hcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999965433222111 12346889999999999998888764
Q ss_pred CccEEEEcccccCchhh-c---cChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRYA-M---QNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~-~---~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+|||+||....... . ......+.+|+.++.++++++. +.+. ++||++||...+..
T Consensus 77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~~sS~~~~~~------------- 142 (257)
T PRK07074 77 PVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSR-GAVVNIGSVNGMAA------------- 142 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-eEEEEEcchhhcCC-------------
Confidence 57999999997543211 1 1224567899999988888773 3443 38999999644321
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC-CcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD-MAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.....|+.+|++.+.+++.+++++ |+++++++||.++++..... .....+....... ...++++
T Consensus 143 ~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 210 (257)
T PRK07074 143 LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKW------------YPLQDFA 210 (257)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhc------------CCCCCCC
Confidence 112469999999999999998765 79999999999998753211 0011222222111 1235699
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHH
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEK 355 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~ 355 (424)
+++|++++++.++...... ..|+++++.+|...+.+|+++.+..
T Consensus 211 ~~~d~a~~~~~l~~~~~~~----------~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 211 TPDDVANAVLFLASPAARA----------ITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred CHHHHHHHHHHHcCchhcC----------cCCcEEEeCCCcCcCChhhhhhhcc
Confidence 9999999999999654321 3348999999999999999988754
No 87
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.91 E-value=9e-23 Score=189.55 Aligned_cols=229 Identities=14% Similarity=0.097 Sum_probs=159.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-eCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
++++++++||||+|+||.+++++|+++|++|+++ .|+.+.......... .....+.++.+|++|.+++.++++++
T Consensus 3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~d~~~i~~~~~~~~ 79 (254)
T PRK12746 3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIE---SNGGKAFLIEADLNSIDGVKKLVEQLK 79 (254)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH---hcCCcEEEEEcCcCCHHHHHHHHHHHH
Confidence 4567899999999999999999999999999876 564332221111111 11346889999999999998888753
Q ss_pred ----------CccEEEEcccccCchhhcc----ChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCC
Q 042406 154 ----------AFTHVMHLAAQAGVRYAMQ----NPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 154 ----------~~d~vi~~Ag~~~~~~~~~----~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
++|+||||||........+ ..+..+++|+.++.++++++.+.. ..++||++||..++...
T Consensus 80 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~----- 154 (254)
T PRK12746 80 NELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF----- 154 (254)
T ss_pred HHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC-----
Confidence 5799999999754322222 225678899999999999887631 12389999998776521
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
.+...|+.+|.+.+.+++.++.+ .++++++++||.+++|-...-.....+. ...... .
T Consensus 155 -------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~-~~~~~~-----------~ 215 (254)
T PRK12746 155 -------TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIR-NFATNS-----------S 215 (254)
T ss_pred -------CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHH-HHHHhc-----------C
Confidence 34578999999999999988875 4799999999999987432100001111 111111 1
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
....+++++|+|+++..++...... ..|++|++.++
T Consensus 216 ~~~~~~~~~dva~~~~~l~~~~~~~----------~~g~~~~i~~~ 251 (254)
T PRK12746 216 VFGRIGQVEDIADAVAFLASSDSRW----------VTGQIIDVSGG 251 (254)
T ss_pred CcCCCCCHHHHHHHHHHHcCcccCC----------cCCCEEEeCCC
Confidence 1234778999999998887754321 23479999876
No 88
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.91 E-value=5.9e-23 Score=186.51 Aligned_cols=210 Identities=18% Similarity=0.222 Sum_probs=160.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
...+++++|||||++||..+|++|+++|++|+++.|+.+++.....+.... ....++++.+|+++++++.++.+..
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~--~~v~v~vi~~DLs~~~~~~~l~~~l~~ 80 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK--TGVEVEVIPADLSDPEALERLEDELKE 80 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh--hCceEEEEECcCCChhHHHHHHHHHHh
Confidence 357889999999999999999999999999999999888776655554433 2457899999999999998887642
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHH----HHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVN----LLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~----ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
.+|++|||||...... .+++.+.++++|+.++.. ++.-+.+.+.+ +||+++|.+.|-..
T Consensus 81 ~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G-~IiNI~S~ag~~p~--------- 150 (265)
T COG0300 81 RGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAG-HIINIGSAAGLIPT--------- 150 (265)
T ss_pred cCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEechhhcCCC---------
Confidence 5799999999865432 222335799999999554 45556666655 99999998887532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
+-.+.|++||+..-.+.+.+..+. |++++.|+||.+..+.... .+..... .....-
T Consensus 151 ---p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~------------~~~~~~~------~~~~~~ 209 (265)
T COG0300 151 ---PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA------------KGSDVYL------LSPGEL 209 (265)
T ss_pred ---cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc------------ccccccc------ccchhh
Confidence 345889999999988888887764 8999999999998763321 1111111 111334
Q ss_pred cccHHHHHHHHHHHhhhcc
Q 042406 300 FTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~ 318 (424)
++..+|+|++.+.++++..
T Consensus 210 ~~~~~~va~~~~~~l~~~k 228 (265)
T COG0300 210 VLSPEDVAEAALKALEKGK 228 (265)
T ss_pred ccCHHHHHHHHHHHHhcCC
Confidence 7889999999999998865
No 89
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.6e-23 Score=192.47 Aligned_cols=233 Identities=14% Similarity=0.097 Sum_probs=160.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+||||++++++|+++|++|++++|+.+............ ...++.++.+|++|.+++.++++..
T Consensus 3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (248)
T PRK07806 3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEA--AGGRASAVGADLTDEESVAALMDTARE 80 (248)
T ss_pred CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999998653211111111111 1346789999999999998888753
Q ss_pred ---CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTDQPAS 229 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~ 229 (424)
++|+||||||.... ...++...+++|+.++.++++++.+... ..++|++||........ .+ .....+
T Consensus 81 ~~~~~d~vi~~ag~~~~--~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~----~~---~~~~~~ 151 (248)
T PRK07806 81 EFGGLDALVLNASGGME--SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT----VK---TMPEYE 151 (248)
T ss_pred hCCCCcEEEECCCCCCC--CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc----cc---CCcccc
Confidence 57999999986432 2334567889999999999999986532 23899999954421100 00 112257
Q ss_pred hHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHH
Q 042406 230 LYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306 (424)
Q Consensus 230 ~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 306 (424)
.|+.||+++|.+++.++.+ .++++++++|+.+-++... .+... ..+-.. . ........+++++|+
T Consensus 152 ~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~------~~~~~---~~~~~~-~--~~~~~~~~~~~~~dv 219 (248)
T PRK07806 152 PVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTA------TLLNR---LNPGAI-E--ARREAAGKLYTVSEF 219 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhh------hhhcc---CCHHHH-H--HHHhhhcccCCHHHH
Confidence 8999999999999999765 3899999999988765211 01100 000000 0 000012359999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
|++++.+++... ..|++|++++++.
T Consensus 220 a~~~~~l~~~~~------------~~g~~~~i~~~~~ 244 (248)
T PRK07806 220 AAEVARAVTAPV------------PSGHIEYVGGADY 244 (248)
T ss_pred HHHHHHHhhccc------------cCccEEEecCccc
Confidence 999999998543 2348999998764
No 90
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.91 E-value=6.7e-23 Score=193.27 Aligned_cols=231 Identities=18% Similarity=0.192 Sum_probs=161.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
.+|++|||||+|+||+++++.|+++|++|++++|+.+........... .....++.++.+|++|++++++ +++.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQ-LNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI 79 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence 467899999999999999999999999999999976443332221111 1113578999999999999887 5543
Q ss_pred -CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcc-cCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSV-YGVNKKVPFSEKDR 223 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~v-yg~~~~~~~~e~~~ 223 (424)
++|+||||||....... .++.+..+++|+.++.++++++ ++.+.+ +||++||... ++.
T Consensus 80 ~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~vsS~~~~~~~----------- 147 (280)
T PRK06914 80 GRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSG-KIINISSISGRVGF----------- 147 (280)
T ss_pred CCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEECcccccCCC-----------
Confidence 57999999997653221 2234567899999988887775 555544 8999999644 332
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHH---HhCCcEEEEEeccccCCCCCCC-----------CcHHHHHHHHHcCCceeEEe
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNH---IYGLSITGLRFFTVYGPWGRPD-----------MAYFFFTRDIIRGKRITVYE 289 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~---~~~i~~~~vrp~~v~G~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 289 (424)
.+...|+.+|.+.+.+++.++. ..|++++++|||.++++..... ......+..+....
T Consensus 148 --~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 219 (280)
T PRK06914 148 --PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHI------ 219 (280)
T ss_pred --CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHH------
Confidence 3457899999999999999874 3499999999999988732211 00111111111100
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHH
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVS 347 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~ 347 (424)
......+++++|+|++++.+++++... ..|+++++..+++.
T Consensus 220 ----~~~~~~~~~~~dva~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 260 (280)
T PRK06914 220 ----NSGSDTFGNPIDVANLIVEIAESKRPK-------------LRYPIGKGVKLMIL 260 (280)
T ss_pred ----hhhhhccCCHHHHHHHHHHHHcCCCCC-------------cccccCCchHHHHH
Confidence 011234788999999999999876531 46888876655544
No 91
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.91 E-value=6.2e-23 Score=190.37 Aligned_cols=231 Identities=16% Similarity=0.138 Sum_probs=159.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-HHHHHHHh-hccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-KSLLDKIF-NVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~v~~~~-~~~~ 154 (424)
..+|+|+||||+|+||+.++++|+++|++|+++.|+.++... . .....+++++++|++| .+.+.+.+ .+
T Consensus 15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~----~---~~~~~~~~~~~~Dl~d~~~~l~~~~~~~-- 85 (251)
T PLN00141 15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKT----S---LPQDPSLQIVRADVTEGSDKLVEAIGDD-- 85 (251)
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHH----h---cccCCceEEEEeeCCCCHHHHHHHhhcC--
Confidence 457899999999999999999999999999999996542211 0 0112468999999998 46666666 44
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
+|+|||++|.... .++...+.+|..++.++++++++.+.+ +||++||.++||.....+..+......+...|..+
T Consensus 86 ~d~vi~~~g~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~~~-~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~ 160 (251)
T PLN00141 86 SDAVICATGFRRS----FDPFAPWKVDNFGTVNLVEACRKAGVT-RFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVA 160 (251)
T ss_pred CCEEEECCCCCcC----CCCCCceeeehHHHHHHHHHHHHcCCC-EEEEEccccccCCCcccccCcchhHHHHHHHHHHH
Confidence 5999999986321 122334578999999999999998875 99999999999854332222111110112234456
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHh
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGL 314 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 314 (424)
|..+|.+++. .|+++++|||+.++++.... .+.+. ........+|+.+|+|++++.++
T Consensus 161 k~~~e~~l~~----~gi~~~iirpg~~~~~~~~~---------------~~~~~---~~~~~~~~~i~~~dvA~~~~~~~ 218 (251)
T PLN00141 161 KLQAEKYIRK----SGINYTIVRPGGLTNDPPTG---------------NIVME---PEDTLYEGSISRDQVAEVAVEAL 218 (251)
T ss_pred HHHHHHHHHh----cCCcEEEEECCCccCCCCCc---------------eEEEC---CCCccccCcccHHHHHHHHHHHh
Confidence 7777766553 48999999999999863211 11111 01112235899999999999999
Q ss_pred hhccccCCCCCCCCCCCCcceEEcCC---CCcccHHHHHHHHHH
Q 042406 315 DTAKKSTGSGGKKKGPAEFRIFNLGN---TTPVPVSRLVSLLEK 355 (424)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~s~~el~~~i~~ 355 (424)
..+... ++++.+.+ +...++++++..+.+
T Consensus 219 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 219 LCPESS------------YKVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred cChhhc------------CcEEEEecCCCCCchhHHHHHHHhhc
Confidence 876532 25677775 334788998887764
No 92
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.91 E-value=1.3e-22 Score=189.16 Aligned_cols=237 Identities=13% Similarity=0.086 Sum_probs=161.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+|+||||+|+||.++++.|+++|++|++++|+............. ......+.++.+|++|.+++.++++++
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINA-EYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH-hcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999975443332222111 111246899999999999998888764
Q ss_pred CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCc-ccCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSS-VYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~-vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.+ .+...++|++||.. .++.
T Consensus 81 ~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~------------ 148 (259)
T PRK12384 81 RVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS------------ 148 (259)
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC------------
Confidence 6899999999754322 1223456889999998877776644 34234899998854 3332
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHc--CCceeEEecCCCCccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIR--GKRITVYEAPDGASVARD 299 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 299 (424)
.....|+.||++.+.+++.++.+ .|++++++|||.++++..... .++.+...... ......+ .+......
T Consensus 149 -~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 223 (259)
T PRK12384 149 -KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQS-LLPQYAKKLGIKPDEVEQYY---IDKVPLKR 223 (259)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhh-hhHHHHHhcCCChHHHHHHH---HHhCcccC
Confidence 23468999999999999988754 589999999999887643221 11111111000 0000000 11223456
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+++++|++.+++.++...... ..|++|++.+|+.
T Consensus 224 ~~~~~dv~~~~~~l~~~~~~~----------~~G~~~~v~~g~~ 257 (259)
T PRK12384 224 GCDYQDVLNMLLFYASPKASY----------CTGQSINVTGGQV 257 (259)
T ss_pred CCCHHHHHHHHHHHcCccccc----------ccCceEEEcCCEE
Confidence 889999999999887654321 2348999998763
No 93
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.3e-22 Score=185.97 Aligned_cols=226 Identities=14% Similarity=0.162 Sum_probs=161.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+.+|+++||||+|+||+++++.|+++|++|++++|...+..........+. .....+.++.+|++|.+++.++++..
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE 83 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999998875433222222211111 12346889999999999998888642
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH-----hcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK-----SSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~-----~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||..... ...++.+..+++|+.++.++++++. +.+. ++||++||...+...
T Consensus 84 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~iv~~sS~~~~~~~-------- 154 (249)
T PRK12827 84 EFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRG-GRIVNIASVAGVRGN-------- 154 (249)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCC-eEEEEECCchhcCCC--------
Confidence 579999999986521 1223345689999999999999887 3443 389999997665421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.+...|+.+|++.+.+++.++.+. +++++++|||.++++........ ..+....+. .
T Consensus 155 ----~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~----~~~~~~~~~------------~ 214 (249)
T PRK12827 155 ----RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPT----EHLLNPVPV------------Q 214 (249)
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchH----HHHHhhCCC------------c
Confidence 345789999999999999987663 89999999999999854432111 122222111 1
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
.+.+.+|++++++.++...... ..|+.+++.+|
T Consensus 215 ~~~~~~~va~~~~~l~~~~~~~----------~~g~~~~~~~g 247 (249)
T PRK12827 215 RLGEPDEVAALVAFLVSDAASY----------VTGQVIPVDGG 247 (249)
T ss_pred CCcCHHHHHHHHHHHcCcccCC----------ccCcEEEeCCC
Confidence 1457899999999888654321 33478888765
No 94
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.91 E-value=1.2e-22 Score=189.02 Aligned_cols=229 Identities=12% Similarity=0.109 Sum_probs=161.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||++++++|+++|++|++++|+....+........ ...++.++.+|++|.+++.++++.+
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDD---LGRRALAVPTDITDEDQCANLVALALER 79 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH---hCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999976433222221111 1346889999999999998888764
Q ss_pred --CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKSSD--PQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||.... ....++.+..+++|+.++..+++++.... ...+||++||...+..
T Consensus 80 ~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~------------ 147 (258)
T PRK07890 80 FGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS------------ 147 (258)
T ss_pred cCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC------------
Confidence 68999999997432 11223446789999999999999886531 1238999999766432
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC---------CcHHHHHHHHHcCCceeEEecCC
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD---------MAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
..+...|+.+|.+.+.+++.++.++ ++++++++||.+++|..... .....+...+...
T Consensus 148 ~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 217 (258)
T PRK07890 148 QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAAN---------- 217 (258)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhc----------
Confidence 1345789999999999999998664 89999999999999843210 0001111111111
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.....+.+++|++++++.++...... ..|+++.+.++.
T Consensus 218 --~~~~~~~~~~dva~a~~~l~~~~~~~----------~~G~~i~~~gg~ 255 (258)
T PRK07890 218 --SDLKRLPTDDEVASAVLFLASDLARA----------ITGQTLDVNCGE 255 (258)
T ss_pred --CCccccCCHHHHHHHHHHHcCHhhhC----------ccCcEEEeCCcc
Confidence 11223778999999999888754321 233677766654
No 95
>PRK07985 oxidoreductase; Provisional
Probab=99.91 E-value=2e-22 Score=191.31 Aligned_cols=231 Identities=11% Similarity=0.032 Sum_probs=162.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchh-hhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE-TSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
++++|+++||||+|+||++++++|+++|++|++.+|+.+... +....... ....++.++.+|++|.+++.++++.+
T Consensus 46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 123 (294)
T PRK07985 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIE--ECGRKAVLLPGDLSDEKFARSLVHEAH 123 (294)
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHH--HcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 467899999999999999999999999999999887543211 11111111 12346788999999999998887754
Q ss_pred ----CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|++|||||.... ....++.+..+++|+.++.++++++.... ...+||++||...+...
T Consensus 124 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~---------- 193 (294)
T PRK07985 124 KALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS---------- 193 (294)
T ss_pred HHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC----------
Confidence 57999999996421 12234456789999999999998886531 12489999998876531
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.....|+.+|++.+.+++.++.+ .|+++++|+||.|++|..............+....+ ...+
T Consensus 194 --~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------------~~r~ 259 (294)
T PRK07985 194 --PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTP------------MKRA 259 (294)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCC------------CCCC
Confidence 23468999999999999999876 489999999999999853211111111222221111 1125
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+|+|.+++.++...... ..|.++.+.+|.
T Consensus 260 ~~pedva~~~~fL~s~~~~~----------itG~~i~vdgG~ 291 (294)
T PRK07985 260 GQPAELAPVYVYLASQESSY----------VTAEVHGVCGGE 291 (294)
T ss_pred CCHHHHHHHHHhhhChhcCC----------ccccEEeeCCCe
Confidence 67899999999988765422 344788887764
No 96
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.91 E-value=2.1e-22 Score=186.61 Aligned_cols=227 Identities=13% Similarity=0.049 Sum_probs=161.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||.+++++|+++|++|++++|+.+.......... ...++.++.+|++|.+++.+++++.
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 78 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEIL----AGGRAIAVAADVSDEADVEAAVAAALER 78 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh----cCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999997654332222111 1346889999999999999988765
Q ss_pred --CccEEEEcccccCchh-----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY-----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~-----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+|||+||...... ..++.+..+++|+.++.++++.+.+ .+. ++||++||...+...
T Consensus 79 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~~sS~~~~~~~--------- 148 (251)
T PRK07231 79 FGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGG-GAIVNVASTAGLRPR--------- 148 (251)
T ss_pred hCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEcChhhcCCC---------
Confidence 6899999999743221 2233467899999998777666543 444 489999998776531
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCc--HHHHHHHHHcCCceeEEecCCCCccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMA--YFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.+...|+.+|.+.+.+++.++.++ ++++++++||.+.++....... .......+... ...
T Consensus 149 ---~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~------------~~~ 213 (251)
T PRK07231 149 ---PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT------------IPL 213 (251)
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC------------CCC
Confidence 345789999999999999988764 8999999999997764221000 00111111111 112
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+++++|+|.+++.++...... ..|+.+.+.++.
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~----------~~g~~~~~~gg~ 248 (251)
T PRK07231 214 GRLGTPEDIANAALFLASDEASW----------ITGVTLVVDGGR 248 (251)
T ss_pred CCCcCHHHHHHHHHHHhCccccC----------CCCCeEEECCCc
Confidence 34789999999999998655321 223677777654
No 97
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.91 E-value=1.6e-22 Score=229.61 Aligned_cols=262 Identities=18% Similarity=0.189 Sum_probs=183.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC----CeEEEEeCCCCchhhhHHHHHhh--------hhccCCeEEEEccCCC---
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRG----DGVLGLDNFNNYYETSLKKARKG--------LLERAGVFVIDADIND--- 142 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~--------~~~~~~v~~~~~Dl~d--- 142 (424)
..++|+||||+||||.+++++|++++ ++|+++.|..+..... ...... .....++.++.+|+++
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~-~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~l 1048 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGL-ERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKF 1048 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHH-HHHHHHHHHhCCCchhhhcceEEEeccCCCccC
Confidence 46899999999999999999999987 7899999975432221 111110 0112378999999974
Q ss_pred ---HHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCC-----
Q 042406 143 ---KSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNK----- 214 (424)
Q Consensus 143 ---~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~----- 214 (424)
.+...++..++ |+|||||+.... ....+.....|+.|+.+++++|.+.+.+ +|+|+||.++|+...
T Consensus 1049 gl~~~~~~~l~~~~--d~iiH~Aa~~~~---~~~~~~~~~~nv~gt~~ll~~a~~~~~~-~~v~vSS~~v~~~~~~~~~~ 1122 (1389)
T TIGR03443 1049 GLSDEKWSDLTNEV--DVIIHNGALVHW---VYPYSKLRDANVIGTINVLNLCAEGKAK-QFSFVSSTSALDTEYYVNLS 1122 (1389)
T ss_pred CcCHHHHHHHHhcC--CEEEECCcEecC---ccCHHHHHHhHHHHHHHHHHHHHhCCCc-eEEEEeCeeecCcccccchh
Confidence 45566666655 999999998652 1233455668999999999999988775 999999999996421
Q ss_pred -------CCCCCCCCCC----CCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCC
Q 042406 215 -------KVPFSEKDRT----DQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGK 283 (424)
Q Consensus 215 -------~~~~~e~~~~----~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~ 283 (424)
...+.|+++. ..+.+.|+.||+++|.++..+.+. |++++++|||.|||+..........++..++.+.
T Consensus 1123 ~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~ 1201 (1389)
T TIGR03443 1123 DELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR-GLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGC 1201 (1389)
T ss_pred hhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC-CCCEEEECCCccccCCCcCCCCchhHHHHHHHHH
Confidence 1123333221 123467999999999999987664 9999999999999986543221112222222211
Q ss_pred -ceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccc
Q 042406 284 -RITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA 361 (424)
Q Consensus 284 -~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~ 361 (424)
.+..+ ......++|++|+|+|++++.++..+... ..+.+||++++..+++.++++.+.+. |.+.
T Consensus 1202 ~~~~~~---p~~~~~~~~~~Vddva~ai~~~~~~~~~~----------~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~ 1266 (1389)
T TIGR03443 1202 IQLGLI---PNINNTVNMVPVDHVARVVVAAALNPPKE----------SELAVAHVTGHPRIRFNDFLGTLKTY-GYDV 1266 (1389)
T ss_pred HHhCCc---CCCCCccccccHHHHHHHHHHHHhCCccc----------CCCCEEEeCCCCCCcHHHHHHHHHHh-CCCC
Confidence 12222 23455689999999999999998754311 12268999999889999999999764 5443
No 98
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.1e-22 Score=186.75 Aligned_cols=226 Identities=15% Similarity=0.141 Sum_probs=160.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||++|+++|+++|++|++++|+.+.......... ...++.++.+|++|.+++.++++.+
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~i~~~ 78 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA----AGGRAFARQGDVGSAEAVEALVDFVAAR 78 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh----cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999997644332222111 2356899999999999999988764
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCccc-CCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVY-GVNKKVPFSEKD 222 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vy-g~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.++.++.+++ ++.+.+ +||++||.+.+ +.
T Consensus 79 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~ii~~sS~~~~~~~---------- 147 (252)
T PRK06138 79 WGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGG-SIVNTASQLALAGG---------- 147 (252)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCe-EEEEECChhhccCC----------
Confidence 6899999999754321 12234567999999987666554 455544 89999997553 32
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC---cHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM---AYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.....|+.+|.+.+.+++.++.++ |++++++|||.++++...... ..+..+...... ...
T Consensus 148 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 213 (252)
T PRK06138 148 ---RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRA-----------RHP 213 (252)
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHh-----------cCC
Confidence 345789999999999999998765 899999999999988432100 000111111110 011
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
...+++++|++++++.++..+... ..|..+.+.++
T Consensus 214 ~~~~~~~~d~a~~~~~l~~~~~~~----------~~g~~~~~~~g 248 (252)
T PRK06138 214 MNRFGTAEEVAQAALFLASDESSF----------ATGTTLVVDGG 248 (252)
T ss_pred CCCCcCHHHHHHHHHHHcCchhcC----------ccCCEEEECCC
Confidence 123788999999999998776532 33467777655
No 99
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.91 E-value=2.3e-22 Score=186.54 Aligned_cols=231 Identities=13% Similarity=0.049 Sum_probs=161.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++.+++|+||||+|+||++++++|+++|++|++..|.............. ....++.++.+|+++.+++.+++++.
T Consensus 3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (252)
T PRK06077 3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK--ENGGEGIGVLADVSTREGCETLAKATID 80 (252)
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH--HcCCeeEEEEeccCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999998887654321111111111 11235778999999999988887754
Q ss_pred ---CccEEEEcccccCchhhcc----ChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYAMQ----NPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~~~----~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||......... ..+..+++|+.++.++++++.+.- ..++||++||...+.. .
T Consensus 81 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~------------~ 148 (252)
T PRK06077 81 RYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP------------A 148 (252)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC------------C
Confidence 6799999999744322111 124678999999998888876541 1248999999887652 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCC-cHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDM-AYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.+.+.|+.+|++.|.+++.+++++ ++++.+++||.+.++....-. ............ ......+++
T Consensus 149 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~ 217 (252)
T PRK06077 149 YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEK-----------FTLMGKILD 217 (252)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHh-----------cCcCCCCCC
Confidence 456899999999999999998876 799999999999887432100 000000011100 011235899
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
++|+|++++.++.... ..+++|++.+|..
T Consensus 218 ~~dva~~~~~~~~~~~------------~~g~~~~i~~g~~ 246 (252)
T PRK06077 218 PEEVAEFVAAILKIES------------ITGQVFVLDSGES 246 (252)
T ss_pred HHHHHHHHHHHhCccc------------cCCCeEEecCCee
Confidence 9999999999997442 2348999998753
No 100
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.91 E-value=3.1e-22 Score=185.98 Aligned_cols=230 Identities=12% Similarity=0.098 Sum_probs=159.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||.+++++|+++|++|++++|+.+..+........ ...++.++.+|++|.++++++++++
T Consensus 3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (254)
T PRK07478 3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRA---EGGEAVALAGDVRDEAYAKALVALAVE 79 (254)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999976544333222211 1246889999999999998888754
Q ss_pred ---CccEEEEcccccCc--h---hhccChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV--R---YAMQNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~--~---~~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.... . ...++.+..+++|+.++.+++++ +++.+.+ +||++||...+..
T Consensus 80 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~-~iv~~sS~~~~~~--------- 149 (254)
T PRK07478 80 RFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGG-SLIFTSTFVGHTA--------- 149 (254)
T ss_pred hcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-eEEEEechHhhcc---------
Confidence 68999999997532 1 12233467899999987766554 4444443 8999999766531
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.......|+.||++.+.+++.++.++ |+++++|+||.+-.+..............+....+ ..
T Consensus 150 --~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------------~~ 215 (254)
T PRK07478 150 --GFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHA------------LK 215 (254)
T ss_pred --CCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCC------------CC
Confidence 11345789999999999999998775 79999999999987632210000111111111111 11
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+...+|+|++++.++...... ..|+++.+.+|.
T Consensus 216 ~~~~~~~va~~~~~l~s~~~~~----------~~G~~~~~dgg~ 249 (254)
T PRK07478 216 RMAQPEEIAQAALFLASDAASF----------VTGTALLVDGGV 249 (254)
T ss_pred CCcCHHHHHHHHHHHcCchhcC----------CCCCeEEeCCch
Confidence 2567899999999988654322 334777776653
No 101
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.91 E-value=2.2e-22 Score=187.89 Aligned_cols=236 Identities=19% Similarity=0.137 Sum_probs=159.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||++++++|+++|++|++++|+.+...... . .....++.++.+|++|++++.++++.+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~----~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATA----A-RLPGAKVTATVADVADPAQVERVFDTAVE 82 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H-HHhcCceEEEEccCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999654322111 1 111226789999999999998888754
Q ss_pred ---CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+|||+||.... ....++.+..+++|+.++.++++++. ..+.+++|+++||.+....
T Consensus 83 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~--------- 153 (264)
T PRK12829 83 RFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLG--------- 153 (264)
T ss_pred HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccC---------
Confidence 67999999997622 11223446789999999998888763 3333247888887543211
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEe-cCCCCccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYE-APDGASVA 297 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 297 (424)
..+...|+.+|.+.|.+++.++.+. +++++++|||.++||..... ....... .+.....+. ........
T Consensus 154 ---~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~ 226 (264)
T PRK12829 154 ---YPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRV--IEARAQQ--LGIGLDEMEQEYLEKISL 226 (264)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHH--hhhhhhc--cCCChhHHHHHHHhcCCC
Confidence 1334679999999999999988664 89999999999999853210 0000000 000000000 00000012
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+++++|+|+++..++...... .+++.|++.+|.
T Consensus 227 ~~~~~~~d~a~~~~~l~~~~~~~----------~~g~~~~i~~g~ 261 (264)
T PRK12829 227 GRMVEPEDIAATALFLASPAARY----------ITGQAISVDGNV 261 (264)
T ss_pred CCCCCHHHHHHHHHHHcCccccC----------ccCcEEEeCCCc
Confidence 24899999999998887543211 234789999875
No 102
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.91 E-value=5.1e-22 Score=186.68 Aligned_cols=215 Identities=14% Similarity=0.109 Sum_probs=153.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+.+|+++||||+|+||++++++|+++|++|++++|+.+.......... ....++.++.+|++|.+++.++++.+
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIR---ADGGEAVAFPLDVTDPDSVKSFVAQAEEA 84 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 566899999999999999999999999999999986543222111111 11246788999999999999888754
Q ss_pred --CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||....... .++.+..+++|+.++.++++++.+ .+. .+||++||...+...
T Consensus 85 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~-g~iv~isS~~~~~~~---------- 153 (274)
T PRK07775 85 LGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRR-GDLIFVGSDVALRQR---------- 153 (274)
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-ceEEEECChHhcCCC----------
Confidence 57999999997543221 223356789999999998887643 333 389999998776531
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC--CCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP--DMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.+...|+.+|++.|.+++.++++. |++++++|||.+.++.... ......++..... + ......
T Consensus 154 --~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~------~----~~~~~~ 221 (274)
T PRK07775 154 --PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK------W----GQARHD 221 (274)
T ss_pred --CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH------h----cccccc
Confidence 235689999999999999998765 8999999999886653221 1111112221111 0 111235
Q ss_pred ccccHHHHHHHHHHHhhhc
Q 042406 299 DFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~ 317 (424)
.+++++|+|++++.+++.+
T Consensus 222 ~~~~~~dva~a~~~~~~~~ 240 (274)
T PRK07775 222 YFLRASDLARAITFVAETP 240 (274)
T ss_pred cccCHHHHHHHHHHHhcCC
Confidence 6999999999999998764
No 103
>PLN02253 xanthoxin dehydrogenase
Probab=99.91 E-value=1.7e-22 Score=190.53 Aligned_cols=240 Identities=13% Similarity=0.090 Sum_probs=162.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|+++||||+|+||++++++|+++|++|++++|+.+....... ......++.++++|++|.+++.++++.+
T Consensus 14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 89 (280)
T PLN02253 14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCD----SLGGEPNVCFFHCDVTVEDDVSRAVDFTV 89 (280)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----HhcCCCceEEEEeecCCHHHHHHHHHHHH
Confidence 35678999999999999999999999999999999986543222111 1112346889999999999999888754
Q ss_pred ----CccEEEEcccccCch------hhccChHHHHHHHHHHHHHHHHHHHhcC---CCCeEEEecCCcc-cCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR------YAMQNPNSYVESNIAGFVNLLETCKSSD---PQPAIVWASSSSV-YGVNKKVPFS 219 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~------~~~~~~~~~~~~N~~g~~~ll~a~~~~~---~~~~~v~~SS~~v-yg~~~~~~~~ 219 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.... ...++|++||... ++.
T Consensus 90 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------- 162 (280)
T PLN02253 90 DKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG------- 162 (280)
T ss_pred HHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-------
Confidence 679999999975321 1123446799999999999888775421 1237888887544 332
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC---CC-cHHHHHHHHHcCCceeEEecCC
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP---DM-AYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
.....|+.+|++.|.+++.++.++ |+++++++||.+.++.... +. .....+..+.. ... .
T Consensus 163 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~--~ 229 (280)
T PLN02253 163 ------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRA-----FAG--K 229 (280)
T ss_pred ------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHH-----Hhh--c
Confidence 223579999999999999998775 8999999999998763211 10 00011111000 000 0
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHH
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSR 348 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e 348 (424)
........++++|+|.+++.++...... ..|+.+++.+|...+..+
T Consensus 230 ~~~l~~~~~~~~dva~~~~~l~s~~~~~----------i~G~~i~vdgG~~~~~~~ 275 (280)
T PLN02253 230 NANLKGVELTVDDVANAVLFLASDEARY----------ISGLNLMIDGGFTCTNHS 275 (280)
T ss_pred CCCCcCCCCCHHHHHHHHHhhcCccccc----------ccCcEEEECCchhhccch
Confidence 0000112478999999999988654321 344789998876544433
No 104
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.91 E-value=8.3e-22 Score=186.64 Aligned_cols=231 Identities=13% Similarity=0.124 Sum_probs=166.1
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|++|||||+|+||.+++++|+++|++|++++|+.+.......... . ....++.++.+|++|.+++.++++++
T Consensus 42 ~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~-~-~~~~~~~~~~~Dl~~~~~~~~~~~~i~ 119 (290)
T PRK06701 42 GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRV-E-KEGVKCLLIPGDVSDEAFCKDAVEETV 119 (290)
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHH-H-hcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 45678999999999999999999999999999999997543222111111 1 11346889999999999998888764
Q ss_pred ----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||..... ...++....+++|+.++.++++++.... ...+||++||...|...
T Consensus 120 ~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~---------- 189 (290)
T PRK06701 120 RELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN---------- 189 (290)
T ss_pred HHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC----------
Confidence 689999999975321 1122335689999999999999886531 12389999998877532
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.....|+.+|.+.+.+++.++.++ |+++++|+||.++++...... .......+.. ......+
T Consensus 190 --~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-~~~~~~~~~~------------~~~~~~~ 254 (290)
T PRK06701 190 --ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-DEEKVSQFGS------------NTPMQRP 254 (290)
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-CHHHHHHHHh------------cCCcCCC
Confidence 234679999999999999999875 899999999999987432211 1111121211 1112347
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+++|+|++++.++...... ..|.++++.++.
T Consensus 255 ~~~~dva~~~~~ll~~~~~~----------~~G~~i~idgg~ 286 (290)
T PRK06701 255 GQPEELAPAYVFLASPDSSY----------ITGQMLHVNGGV 286 (290)
T ss_pred cCHHHHHHHHHHHcCcccCC----------ccCcEEEeCCCc
Confidence 88999999999998875421 234788887764
No 105
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.90 E-value=1.5e-22 Score=188.78 Aligned_cols=261 Identities=19% Similarity=0.208 Sum_probs=174.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHh--------hhhccCCeEEEEccCC------CHH
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARK--------GLLERAGVFVIDADIN------DKS 144 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~--------~~~~~~~v~~~~~Dl~------d~~ 144 (424)
++|++||||||+|.+|+++|+.+- .+|+|+.|-.+.... ..+..+ .+....+|+++.+|+. +..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a-~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~ 79 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAA-LARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSER 79 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHH-HHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHH
Confidence 579999999999999999999985 599999997653222 111111 2245678999999998 456
Q ss_pred HHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCC----CCC
Q 042406 145 LLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP----FSE 220 (424)
Q Consensus 145 ~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~----~~e 220 (424)
...++.+.+ |.|||||+.++. ....+.....|+.||..+++.|.....+ .+.|+||.+|+....... +++
T Consensus 80 ~~~~La~~v--D~I~H~gA~Vn~---v~pYs~L~~~NVlGT~evlrLa~~gk~K-p~~yVSsisv~~~~~~~~~~~~~~~ 153 (382)
T COG3320 80 TWQELAENV--DLIIHNAALVNH---VFPYSELRGANVLGTAEVLRLAATGKPK-PLHYVSSISVGETEYYSNFTVDFDE 153 (382)
T ss_pred HHHHHhhhc--ceEEecchhhcc---cCcHHHhcCcchHhHHHHHHHHhcCCCc-eeEEEeeeeeccccccCCCcccccc
Confidence 788888877 999999998662 3556788899999999999999987764 799999999986543222 221
Q ss_pred CCC----CCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC----CcHHHHHHHHHcCCceeEEecCC
Q 042406 221 KDR----TDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD----MAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 221 ~~~----~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
.++ ...+.+.|++||+++|.++++..+. |++++|+|||+|.|+..... -++..++..+++-...+
T Consensus 154 ~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P------ 226 (382)
T COG3320 154 ISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAP------ 226 (382)
T ss_pred ccccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCC------
Confidence 121 1234588999999999999999887 99999999999999865321 12334444444433322
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEE-cCCCCcccHHHHHHHHHH
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFN-LGNTTPVPVSRLVSLLEK 355 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~el~~~i~~ 355 (424)
+.....+.+.++++++++........+....-+. +++.....|+ ..-|..+...++.+.+.+
T Consensus 227 ~~~~~~~~~p~~~v~~~v~~~~~~~~~~~~~l~~-~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 227 DSEYSLDMLPVDHVARAVVAPSVQVAEAIAALGA-HSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred CcccchhhCccceeeEEeehhhhhHHHHHHHhcc-CccchhhheecccCCCccchhHHHHhHhh
Confidence 2233344444444444443333222100000000 1112223444 222677999999998887
No 106
>PRK05717 oxidoreductase; Validated
Probab=99.90 E-value=4.4e-22 Score=185.12 Aligned_cols=228 Identities=18% Similarity=0.088 Sum_probs=159.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
..+.++|+++||||+|+||+++++.|+++|++|++++|+.+...... .. ...++.++++|++|.+++.+++++.
T Consensus 5 ~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~-----~~-~~~~~~~~~~Dl~~~~~~~~~~~~~ 78 (255)
T PRK05717 5 NPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA-----KA-LGENAWFIAMDVADEAQVAAGVAEV 78 (255)
T ss_pred CcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-----HH-cCCceEEEEccCCCHHHHHHHHHHH
Confidence 34578899999999999999999999999999999998643322211 11 1246889999999999987776654
Q ss_pred -----CccEEEEcccccCch------hhccChHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR------YAMQNPNSYVESNIAGFVNLLETCKSS--DPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~------~~~~~~~~~~~~N~~g~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.+. ....+||++||...+...
T Consensus 79 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~------- 151 (255)
T PRK05717 79 LGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE------- 151 (255)
T ss_pred HHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC-------
Confidence 589999999975421 122334678999999999999998642 112389999987654321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.....|+.+|++.+.+++.++.++ ++++++++||.+.++........ .+.. ..... .+ ..
T Consensus 152 -----~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~-~~~~-~~~~~-~~----------~~ 213 (255)
T PRK05717 152 -----PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAE-PLSE-ADHAQ-HP----------AG 213 (255)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccch-HHHH-HHhhc-CC----------CC
Confidence 234679999999999999998876 59999999999999743221100 1111 11110 00 11
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+.+++|+|.+++.++...... ..|+.+.+.++.
T Consensus 214 ~~~~~~~va~~~~~l~~~~~~~----------~~g~~~~~~gg~ 247 (255)
T PRK05717 214 RVGTVEDVAAMVAWLLSRQAGF----------VTGQEFVVDGGM 247 (255)
T ss_pred CCcCHHHHHHHHHHHcCchhcC----------ccCcEEEECCCc
Confidence 3678999999999887654321 234677776653
No 107
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.90 E-value=5.3e-22 Score=183.60 Aligned_cols=226 Identities=15% Similarity=0.109 Sum_probs=159.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++++++||||+|+||.+++++|+++|++|+++.+......+....... ....++.++.+|++|.+++.++++++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 81 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELG--KEGHDVYAVQADVSKVEDANRLVEEAVNH 81 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHH--hcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 5689999999999999999999999999998876543221111111110 11246899999999999999888874
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ...+.+..+++|+.++.++++++.. .+. ++||++||...+..
T Consensus 82 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~~sS~~~~~~----------- 149 (247)
T PRK12935 82 FGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEE-GRIISISSIIGQAG----------- 149 (247)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-cEEEEEcchhhcCC-----------
Confidence 5799999999854321 1234567899999999999888764 233 38999999654321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
..+...|+.+|.+.+.+++.+..++ ++++++++||.+.++.... ...........+ ...+.+
T Consensus 150 -~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~--~~~~~~~~~~~~------------~~~~~~ 214 (247)
T PRK12935 150 -GFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE--VPEEVRQKIVAK------------IPKKRF 214 (247)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh--ccHHHHHHHHHh------------CCCCCC
Confidence 1345789999999999999988764 8999999999998763221 011111111111 123458
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+++|++++++.+++.... ..|+.||+.++.
T Consensus 215 ~~~edva~~~~~~~~~~~~-----------~~g~~~~i~~g~ 245 (247)
T PRK12935 215 GQADEIAKGVVYLCRDGAY-----------ITGQQLNINGGL 245 (247)
T ss_pred cCHHHHHHHHHHHcCcccC-----------ccCCEEEeCCCc
Confidence 9999999999998864321 233899998863
No 108
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.90 E-value=2.6e-22 Score=184.46 Aligned_cols=218 Identities=15% Similarity=0.110 Sum_probs=161.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|++|||||+|+||++++++|+++|++|++++|+.+........ ....++.++.+|+.|.+++.++++++
T Consensus 4 ~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (239)
T PRK12828 4 SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPG-----VPADALRIGGIDLVDPQAARRAVDEVNR 78 (239)
T ss_pred CCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHH-----HhhcCceEEEeecCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999976433222211 12245778899999999998888754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+|||+||...... ..++.+..+.+|+.++.++++++. +.+. ++||++||...++..
T Consensus 79 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~~sS~~~~~~~--------- 148 (239)
T PRK12828 79 QFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGG-GRIVNIGAGAALKAG--------- 148 (239)
T ss_pred HhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCC-CEEEEECchHhccCC---------
Confidence 5799999999753211 122235678899999998888764 3444 499999998877532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|+.+|.+.+.+++.++.. .+++++++|||.++++...... + ......
T Consensus 149 ---~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~-------------~---------~~~~~~ 203 (239)
T PRK12828 149 ---PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM-------------P---------DADFSR 203 (239)
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC-------------C---------chhhhc
Confidence 34578999999999999888764 4899999999999987321100 0 011223
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+++++|+|++++.++...... ..|+.+++.++..
T Consensus 204 ~~~~~dva~~~~~~l~~~~~~----------~~g~~~~~~g~~~ 237 (239)
T PRK12828 204 WVTPEQIAAVIAFLLSDEAQA----------ITGASIPVDGGVA 237 (239)
T ss_pred CCCHHHHHHHHHHHhCccccc----------ccceEEEecCCEe
Confidence 899999999999988764321 2348898888753
No 109
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=99.90 E-value=4.6e-23 Score=178.05 Aligned_cols=305 Identities=18% Similarity=0.196 Sum_probs=226.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC-CC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKR-GD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
+--+||||||-|.+|..++..|..+ |- .|++-|.-+. .. .....-.|+..|+.|...++++.-+.++
T Consensus 43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KP---------p~--~V~~~GPyIy~DILD~K~L~eIVVn~RI 111 (366)
T KOG2774|consen 43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKP---------PA--NVTDVGPYIYLDILDQKSLEEIVVNKRI 111 (366)
T ss_pred CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCC---------ch--hhcccCCchhhhhhccccHHHhhccccc
Confidence 3447999999999999999988876 64 5655554221 11 1122345888999999999999888899
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHH
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK 235 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK 235 (424)
|.+||..+..+. ..+.+.....++|+.|..|+++.+++++. ++..-|+.+.||...+..-+.+-....|.+.||.||
T Consensus 112 dWL~HfSALLSA-vGE~NVpLA~~VNI~GvHNil~vAa~~kL--~iFVPSTIGAFGPtSPRNPTPdltIQRPRTIYGVSK 188 (366)
T KOG2774|consen 112 DWLVHFSALLSA-VGETNVPLALQVNIRGVHNILQVAAKHKL--KVFVPSTIGAFGPTSPRNPTPDLTIQRPRTIYGVSK 188 (366)
T ss_pred ceeeeHHHHHHH-hcccCCceeeeecchhhhHHHHHHHHcCe--eEeecccccccCCCCCCCCCCCeeeecCceeechhH
Confidence 999998876432 23566677889999999999999999987 688889999999765433333322346789999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEeccccCC---CC-CCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 236 KAGEAIAHAYNHIYGLSITGLRFFTVYGP---WG-RPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 236 ~~~e~~~~~~~~~~~i~~~~vrp~~v~G~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
..+|.+-+.+..+.|+.+-++|.+.++.. ++ ..+.....|..+..+|+.... -.++.+....|.+||-++++
T Consensus 189 VHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCy----lrpdtrlpmmy~~dc~~~~~ 264 (366)
T KOG2774|consen 189 VHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCY----LRPDTRLPMMYDTDCMASVI 264 (366)
T ss_pred HHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccc----cCCCccCceeehHHHHHHHH
Confidence 99999999999999999999999888763 32 335556666666667765443 36788889999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCC--CCCcccccCChHHHHhHcC
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR--NGDVQFTHANISLAQRELG 389 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~--~~~~~~~~~d~s~~~~~LG 389 (424)
.++..+.++ -..++||+++ -.+|..|+++.+.+.+..- .+.+.+..+ ..+.....+|+|.+|++.-
T Consensus 265 ~~~~a~~~~----------lkrr~ynvt~-~sftpee~~~~~~~~~p~~-~i~y~~~srq~iad~wp~~~dds~ar~~wh 332 (366)
T KOG2774|consen 265 QLLAADSQS----------LKRRTYNVTG-FSFTPEEIADAIRRVMPGF-EIDYDICTRQSIADSWPMSLDDSEARTEWH 332 (366)
T ss_pred HHHhCCHHH----------hhhheeeece-eccCHHHHHHHHHhhCCCc-eeecccchhhhhhhhcccccCchhHhhHHH
Confidence 999887653 2338999986 5599999999999997631 122222222 1233345789999999999
Q ss_pred CcccCCHHHHHHHHHHHHHHHhc
Q 042406 390 YMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 390 ~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
|+..+.+...+.-++.-.++.+.
T Consensus 333 ~~h~~~l~~~i~~~i~~~~~n~~ 355 (366)
T KOG2774|consen 333 EKHSLHLLSIISTVVAVHKSNLK 355 (366)
T ss_pred HhhhhhHHHHHHHHHHHHHhhhh
Confidence 99888877666666665555443
No 110
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.2e-22 Score=183.92 Aligned_cols=225 Identities=18% Similarity=0.167 Sum_probs=161.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-C
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-A 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~ 154 (424)
++++|+++||||+|+||.++++.|+++|++|++++|+.+.... .. ...++.++.+|++|.+++.++++.. +
T Consensus 6 ~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~----~~----~~~~~~~~~~D~~~~~~v~~~~~~~~~ 77 (245)
T PRK07060 6 DFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDR----LA----GETGCEPLRLDVGDDAAIRAALAAAGA 77 (245)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HH----HHhCCeEEEecCCCHHHHHHHHHHhCC
Confidence 3678899999999999999999999999999999996432211 11 1124678899999999999988864 4
Q ss_pred ccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|+||||||...... ...+.+..+.+|+.++.++++++.+. +..++||++||...+... .
T Consensus 78 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~ 145 (245)
T PRK07060 78 FDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------P 145 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------C
Confidence 799999999854321 12334567889999999998877653 222489999997665421 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
+...|+.+|.++|.+++.++.++ +++++++|||.++++..............+... .....++++
T Consensus 146 ~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 213 (245)
T PRK07060 146 DHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA------------IPLGRFAEV 213 (245)
T ss_pred CCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc------------CCCCCCCCH
Confidence 45789999999999999998764 899999999999998532110001111111111 112348999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+|+|++++.++..+... .+|+.+++.+|.
T Consensus 214 ~d~a~~~~~l~~~~~~~----------~~G~~~~~~~g~ 242 (245)
T PRK07060 214 DDVAAPILFLLSDAASM----------VSGVSLPVDGGY 242 (245)
T ss_pred HHHHHHHHHHcCcccCC----------ccCcEEeECCCc
Confidence 99999999998765422 345888887764
No 111
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.90 E-value=7.4e-22 Score=185.90 Aligned_cols=216 Identities=15% Similarity=0.112 Sum_probs=151.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
.+|+++||||+|+||++++++|+++|++|++++|+.+.... ... ....++.++.+|++|.+++.++++++
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~----l~~--~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARAD----FEA--LHPDRALARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHH----HHh--hcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence 46889999999999999999999999999999996542211 111 12346889999999999998888764
Q ss_pred -CccEEEEcccccCchhhcc----ChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRYAMQ----NPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~~~~----~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||........+ +.+..+++|+.|+.++++++. +.+.+ +||++||.+.+...
T Consensus 77 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~-~iv~iSS~~~~~~~----------- 144 (277)
T PRK06180 77 GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRG-HIVNITSMGGLITM----------- 144 (277)
T ss_pred CCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCC-EEEEEecccccCCC-----------
Confidence 5799999999854322222 235679999999999988853 34433 89999997665421
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCC-----cHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDM-----AYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.+...|+.+|++.|.+++.++.+ .|++++++|||.+.++...... ................. ...
T Consensus 145 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 217 (277)
T PRK06180 145 -PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQARE------AKS 217 (277)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHH------hhc
Confidence 35678999999999999998866 4899999999999887432111 11111110000000000 001
Q ss_pred ccccccHHHHHHHHHHHhhhcc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
...+..++|+|++++.+++.+.
T Consensus 218 ~~~~~~~~dva~~~~~~l~~~~ 239 (277)
T PRK06180 218 GKQPGDPAKAAQAILAAVESDE 239 (277)
T ss_pred cCCCCCHHHHHHHHHHHHcCCC
Confidence 1235679999999999998764
No 112
>PRK09186 flagellin modification protein A; Provisional
Probab=99.90 E-value=2.8e-22 Score=186.45 Aligned_cols=234 Identities=16% Similarity=0.129 Sum_probs=158.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+|+||||+|+||+++++.|+++|++|++++|+.+..+........ ......+.++.+|++|++++.+++++.
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~ 80 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGK-EFKSKKLSLVELDITDQESLEEFLSKSAEK 80 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHh-hcCCCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999976544333222211 112345678899999999999988864
Q ss_pred --CccEEEEcccccCch-------hhccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVR-------YAMQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~-------~~~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+|||||+..... ...+..+..+++|+.++..+++ .+++.+.+ +||++||.+.+..... ...+
T Consensus 81 ~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~~sS~~~~~~~~~-~~~~ 158 (256)
T PRK09186 81 YGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGG-NLVNISSIYGVVAPKF-EIYE 158 (256)
T ss_pred cCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCc-eEEEEechhhhccccc-hhcc
Confidence 379999999753211 1112235678889988765544 44545554 8999999665432111 1112
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
+.+. .....|++||.+.+.+++.++.+. ++++++++||.++++... .+........+ .
T Consensus 159 ~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~------~~~~~~~~~~~------------~ 219 (256)
T PRK09186 159 GTSM-TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPE------AFLNAYKKCCN------------G 219 (256)
T ss_pred cccc-CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCH------HHHHHHHhcCC------------c
Confidence 2222 223479999999999999888763 799999999998865311 12222221110 1
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+++++|+|++++.++.+.... .+|+.+.+.+|.
T Consensus 220 ~~~~~~~dva~~~~~l~~~~~~~----------~~g~~~~~~~g~ 254 (256)
T PRK09186 220 KGMLDPDDICGTLVFLLSDQSKY----------ITGQNIIVDDGF 254 (256)
T ss_pred cCCCCHHHhhhhHhheecccccc----------ccCceEEecCCc
Confidence 23789999999999999765432 234778777663
No 113
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.7e-22 Score=185.22 Aligned_cols=229 Identities=13% Similarity=0.075 Sum_probs=160.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+..+|+++||||+|+||++++++|+++|++|+++++.............. ....++.++.+|++|.+++.++++++
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 83 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIR--ALGRRAVALQADLADEAEVRALVARASA 83 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--hcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999887754221111111111 12346889999999999999888764
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhcC---CCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSSD---PQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.... ..+++|++||...+...
T Consensus 84 ~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~---------- 153 (258)
T PRK09134 84 ALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN---------- 153 (258)
T ss_pred HcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC----------
Confidence 579999999975432 1223346789999999999998876532 22488888886554321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.....|+.+|.+.|.+++.+++++ ++++++++||.++.+... ....+. ......+ . + ...
T Consensus 154 --p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~---~~~~~~-~~~~~~~--~----~------~~~ 215 (258)
T PRK09134 154 --PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ---SPEDFA-RQHAATP--L----G------RGS 215 (258)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc---ChHHHH-HHHhcCC--C----C------CCc
Confidence 223579999999999999998765 499999999998765321 111222 2222111 1 1 146
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccH
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPV 346 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~ 346 (424)
+++|+|++++.+++.+. ..++.|++.++..+++
T Consensus 216 ~~~d~a~~~~~~~~~~~------------~~g~~~~i~gg~~~~~ 248 (258)
T PRK09134 216 TPEEIAAAVRYLLDAPS------------VTGQMIAVDGGQHLAW 248 (258)
T ss_pred CHHHHHHHHHHHhcCCC------------cCCCEEEECCCeeccc
Confidence 79999999999998543 3348899988765544
No 114
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.90 E-value=4.5e-22 Score=184.21 Aligned_cols=211 Identities=20% Similarity=0.188 Sum_probs=151.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+.+|+++||||+|+||++++++|+++|++|++++|+.+.... ...+ . ..++.++++|++|.+++.++++.+
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~----~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEA----ARAE-L-GESALVIRADAGDVAAQKALAQALAEA 77 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHH----HHHH-h-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999986432211 1111 1 246788999999999887776643
Q ss_pred --CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecC-CcccCCCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASS-SSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS-~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||..... ...++.+..+++|+.++.++++++...- ...++|++|| .+.|+.
T Consensus 78 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~------------- 144 (249)
T PRK06500 78 FGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM------------- 144 (249)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC-------------
Confidence 579999999975432 1233456789999999999999987521 1136666666 455542
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCC----CCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGR----PDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.....|+.+|++.|.+++.++.++ |++++++|||.+++|... .......+...+....++.
T Consensus 145 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 212 (249)
T PRK06500 145 PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG------------ 212 (249)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC------------
Confidence 345789999999999999988664 899999999999997421 1111223333333332221
Q ss_pred ccccHHHHHHHHHHHhhhcc
Q 042406 299 DFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~ 318 (424)
-+..++|+|++++.++....
T Consensus 213 ~~~~~~~va~~~~~l~~~~~ 232 (249)
T PRK06500 213 RFGTPEEIAKAVLYLASDES 232 (249)
T ss_pred CCcCHHHHHHHHHHHcCccc
Confidence 14578999999999886543
No 115
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.90 E-value=8.9e-22 Score=181.58 Aligned_cols=226 Identities=15% Similarity=0.126 Sum_probs=162.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+.+|+|+||||+|+||.++++.|+++|++|++++|+............ ....++.++.+|++|.+++.++++++
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELR---AAGGEARVLVFDVSDEAAVRALIEAAVEA 79 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHH---hcCCceEEEEccCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999997654322211111 12346889999999999998888764
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
.+|+|||+||...... ..++.+..++.|+.+..++++++. +.+. ++||++||......
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~~ss~~~~~~----------- 147 (246)
T PRK05653 80 FGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARY-GRIVNISSVSGVTG----------- 147 (246)
T ss_pred hCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEECcHHhccC-----------
Confidence 5799999999754321 122235678999999999888874 4454 49999999654321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
..+...|+.+|.+.+.+++.++++. +++++++|||.++++.... ............. ....+
T Consensus 148 -~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~--~~~~~~~~~~~~~------------~~~~~ 212 (246)
T PRK05653 148 -NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG--LPEEVKAEILKEI------------PLGRL 212 (246)
T ss_pred -CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh--hhHHHHHHHHhcC------------CCCCC
Confidence 1345789999999999999987653 8999999999999985532 1111111111111 12458
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
++++|+++++..++...... ..+++|++++|.
T Consensus 213 ~~~~dva~~~~~~~~~~~~~----------~~g~~~~~~gg~ 244 (246)
T PRK05653 213 GQPEEVANAVAFLASDAASY----------ITGQVIPVNGGM 244 (246)
T ss_pred cCHHHHHHHHHHHcCchhcC----------ccCCEEEeCCCe
Confidence 88999999999998654321 344899999875
No 116
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.90 E-value=8.5e-22 Score=182.32 Aligned_cols=226 Identities=13% Similarity=0.117 Sum_probs=159.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||.+++++|+++|++|++++|+.. ........ . ...++.++.+|++|.+++.++++..
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~-~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVE-A--LGRRFLSLTADLSDIEAIKALVDSAVEE 77 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHH-h--cCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999998542 11111111 1 1346889999999999998887754
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.+ .+...++|++||...+...
T Consensus 78 ~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~---------- 147 (248)
T TIGR01832 78 FGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG---------- 147 (248)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC----------
Confidence 5899999999854321 1233457899999999888887753 3323489999998777532
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.....|+.+|++.+.+++.+++++ |+++++|+||.|..+....-.........+... . ....+
T Consensus 148 --~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~----------~~~~~ 213 (248)
T TIGR01832 148 --IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER--I----------PAGRW 213 (248)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc--C----------CCCCC
Confidence 234679999999999999998875 899999999999887432100000111111111 1 11348
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
+..+|+|++++.++...... ..|+++.+.+|
T Consensus 214 ~~~~dva~~~~~l~s~~~~~----------~~G~~i~~dgg 244 (248)
T TIGR01832 214 GTPDDIGGPAVFLASSASDY----------VNGYTLAVDGG 244 (248)
T ss_pred cCHHHHHHHHHHHcCccccC----------cCCcEEEeCCC
Confidence 89999999999988754321 23366666654
No 117
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.90 E-value=6.6e-22 Score=183.91 Aligned_cols=227 Identities=15% Similarity=0.105 Sum_probs=159.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
|+++||||+|+||+++++.|+++|++|++++|+............ . ....++.++.+|++|.+++.++++.+ +
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~-~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQEL-R-ALGVEVIFFPADVADLSAHEAMLDAAQAAWGR 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHH-H-hcCCceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 689999999999999999999999999999986432211111111 0 11346899999999999988888765 6
Q ss_pred ccEEEEcccccCch------hhccChHHHHHHHHHHHHHHHHHHHhc----CC-----CCeEEEecCCcccCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVR------YAMQNPNSYVESNIAGFVNLLETCKSS----DP-----QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~------~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~-----~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
+|+||||||..... ...++.+..+++|+.++.++++++.+. .. ..+||++||...+...
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------ 154 (256)
T PRK12745 81 IDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS------ 154 (256)
T ss_pred CCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC------
Confidence 89999999975321 122344678999999999998877442 11 2379999997664321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.+.+.|+.+|.+.|.+++.++.+ +|+++++++||.+.++..... ...+...+..+ ..+
T Consensus 155 ------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~--~~~~~~~~~~~-~~~---------- 215 (256)
T PRK12745 155 ------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPV--TAKYDALIAKG-LVP---------- 215 (256)
T ss_pred ------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCcccccc--chhHHhhhhhc-CCC----------
Confidence 34578999999999999999865 589999999999998754321 11121111111 111
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
...+.+++|+++++..++...... ..|++|++.++..
T Consensus 216 ~~~~~~~~d~a~~i~~l~~~~~~~----------~~G~~~~i~gg~~ 252 (256)
T PRK12745 216 MPRWGEPEDVARAVAALASGDLPY----------STGQAIHVDGGLS 252 (256)
T ss_pred cCCCcCHHHHHHHHHHHhCCcccc----------cCCCEEEECCCee
Confidence 224779999999999887654321 2348999988754
No 118
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.90 E-value=6.1e-22 Score=197.47 Aligned_cols=240 Identities=13% Similarity=0.063 Sum_probs=164.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhh------hccCCeEEEEccCCCHHHHHH
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL------LERAGVFVIDADINDKSLLDK 148 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~~v~~~~~Dl~d~~~v~~ 148 (424)
....+++|+||||+|+||++++++|+++|++|++++|+.+............. ....++.++.+|+.|.+++.+
T Consensus 76 ~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~ 155 (576)
T PLN03209 76 DTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGP 155 (576)
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHH
Confidence 34578999999999999999999999999999999997654433222111100 012358899999999999999
Q ss_pred HhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCC
Q 042406 149 IFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPA 228 (424)
Q Consensus 149 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~ 228 (424)
++.++ |+||||+|.... ...+....+++|+.|+.+++++|++.+++ +||++||.+++.... ... .....
T Consensus 156 aLggi--DiVVn~AG~~~~--~v~d~~~~~~VN~~Gt~nLl~Aa~~agVg-RIV~VSSiga~~~g~----p~~--~~~sk 224 (576)
T PLN03209 156 ALGNA--SVVICCIGASEK--EVFDVTGPYRIDYLATKNLVDAATVAKVN-HFILVTSLGTNKVGF----PAA--ILNLF 224 (576)
T ss_pred HhcCC--CEEEEccccccc--cccchhhHHHHHHHHHHHHHHHHHHhCCC-EEEEEccchhcccCc----ccc--chhhH
Confidence 99876 999999987432 12244567899999999999999998876 999999987632110 000 01233
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHH
Q 042406 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 308 (424)
..|..+|..+|..+.. .|+++++||||.++++.+... ....+... .........+..+|+|+
T Consensus 225 ~~~~~~KraaE~~L~~----sGIrvTIVRPG~L~tp~d~~~-----------~t~~v~~~---~~d~~~gr~isreDVA~ 286 (576)
T PLN03209 225 WGVLCWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNLTLS---EEDTLFGGQVSNLQVAE 286 (576)
T ss_pred HHHHHHHHHHHHHHHH----cCCCEEEEECCeecCCccccc-----------cccceeec---cccccCCCccCHHHHHH
Confidence 5577778888877653 499999999999998744311 00111111 01111123588999999
Q ss_pred HHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHH
Q 042406 309 GCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLE 354 (424)
Q Consensus 309 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~ 354 (424)
+++.++.++... .+++|.+.++.......+.+++.
T Consensus 287 vVvfLasd~~as-----------~~kvvevi~~~~~p~~~~~~~~~ 321 (576)
T PLN03209 287 LMACMAKNRRLS-----------YCKVVEVIAETTAPLTPMEELLA 321 (576)
T ss_pred HHHHHHcCchhc-----------cceEEEEEeCCCCCCCCHHHHHH
Confidence 999988866432 23889998865443344444443
No 119
>PRK06182 short chain dehydrogenase; Validated
Probab=99.90 E-value=5.8e-22 Score=186.21 Aligned_cols=210 Identities=18% Similarity=0.179 Sum_probs=148.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
++|+++||||+|+||++++++|+++|++|++++|+.+.... ....++.++.+|++|.++++++++.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~---------~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~ 72 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED---------LASLGVHPLSLDVTDEASIKAAVDTIIAEE 72 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHhCCCeEEEeeCCCHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999999999996532211 11235889999999999999888754
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHH----HHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGF----VNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~----~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+++|+.++ ..+++.+++.+.+ +||++||.+.+...
T Consensus 73 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g-~iv~isS~~~~~~~----------- 140 (273)
T PRK06182 73 GRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSG-RIINISSMGGKIYT----------- 140 (273)
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCC-EEEEEcchhhcCCC-----------
Confidence 6799999999854322 2234567899999985 5555666666654 89999996543211
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCC----------CcHHHHHHHHHcCCceeEEecC
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPD----------MAYFFFTRDIIRGKRITVYEAP 291 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 291 (424)
.....|+.+|.+.+.+++.++.+ .|+++++|+||.+.++..... ..+......+.. .+
T Consensus 141 -~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--- 211 (273)
T PRK06182 141 -PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAA-----SM--- 211 (273)
T ss_pred -CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHH-----HH---
Confidence 22357999999999999888754 489999999999998753210 000000000000 00
Q ss_pred CCCccccccccHHHHHHHHHHHhhhc
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
........+.+.+|+|++++.++...
T Consensus 212 ~~~~~~~~~~~~~~vA~~i~~~~~~~ 237 (273)
T PRK06182 212 RSTYGSGRLSDPSVIADAISKAVTAR 237 (273)
T ss_pred HHhhccccCCCHHHHHHHHHHHHhCC
Confidence 00011234678999999999998864
No 120
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.90 E-value=9.4e-22 Score=181.97 Aligned_cols=225 Identities=16% Similarity=0.121 Sum_probs=155.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc-hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
+++++||||+|+||.+++++|+++|+.|++.++.... ......... ....++.++.+|++|.+++.++++.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIR---RQGGEALAVAADVADEADVLRLFEAVDREL 78 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHH---hCCCcEEEEEeccCCHHHHHHHHHHHHHHh
Confidence 4679999999999999999999999998887754321 111111111 11245788999999999999888754
Q ss_pred -CccEEEEcccccCchh-----hccChHHHHHHHHHHHHHHHHHHHhcC------CCCeEEEecCCcc-cCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY-----AMQNPNSYVESNIAGFVNLLETCKSSD------PQPAIVWASSSSV-YGVNKKVPFSE 220 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~-----~~~~~~~~~~~N~~g~~~ll~a~~~~~------~~~~~v~~SS~~v-yg~~~~~~~~e 220 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.+.. ..++||++||.+. ++..
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~------- 151 (248)
T PRK06123 79 GRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP------- 151 (248)
T ss_pred CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC-------
Confidence 5799999999854321 222345789999999999888775431 1237999999654 4321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.....|+.+|++.+.+++.++.++ |+++++||||.+++|...... .+.....+....++..
T Consensus 152 -----~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~---------- 215 (248)
T PRK06123 152 -----GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGR---------- 215 (248)
T ss_pred -----CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCC----------
Confidence 112469999999999999998775 899999999999998532211 1222222222222211
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
+.+++|++++++.++...... ..|+.|++.++
T Consensus 216 --~~~~~d~a~~~~~l~~~~~~~----------~~g~~~~~~gg 247 (248)
T PRK06123 216 --GGTAEEVARAILWLLSDEASY----------TTGTFIDVSGG 247 (248)
T ss_pred --CcCHHHHHHHHHHHhCccccC----------ccCCEEeecCC
Confidence 346899999999888754321 23478998765
No 121
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.90 E-value=1.1e-21 Score=181.64 Aligned_cols=226 Identities=14% Similarity=0.081 Sum_probs=160.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
++|++|||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++..
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 78 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRA---KGGNAQAFACDITDRDSVDTAVAAAEQAL 78 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999999999965433222111111 2346899999999999999888753
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ...+.+..+++|+.++.++++++. +.+. ++||++||.+.+...
T Consensus 79 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~ii~iss~~~~~~~----------- 146 (250)
T TIGR03206 79 GPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGA-GRIVNIASDAARVGS----------- 146 (250)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-eEEEEECchhhccCC-----------
Confidence 5799999999743211 112235679999999998877764 4444 389999998777532
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC----CCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP----DMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.....|+.+|++.+.+++.++++. ++++++++||.++++.... ......+...+....+.
T Consensus 147 -~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 213 (250)
T TIGR03206 147 -SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL------------ 213 (250)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc------------
Confidence 234679999999999999988764 8999999999999873211 00001122222222111
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
.-+...+|+|+++..++...... ..|+++++.+|
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~----------~~g~~~~~~~g 247 (250)
T TIGR03206 214 GRLGQPDDLPGAILFFSSDDASF----------ITGQVLSVSGG 247 (250)
T ss_pred cCCcCHHHHHHHHHHHcCcccCC----------CcCcEEEeCCC
Confidence 12556799999999988764322 34589999875
No 122
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.90 E-value=7.7e-22 Score=183.16 Aligned_cols=224 Identities=13% Similarity=0.053 Sum_probs=160.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++.+|+++||||+|+||+++++.|+++|++|++++|+.+. .....++.++++|++|.+++.++++.+
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-----------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 71 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-----------TVDGRPAEFHAADVRDPDQVAALVDAIVE 71 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-----------hhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999996432 012346889999999999999888765
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ...+.+..+++|+.++.++++++.. .+...+||++||...+..
T Consensus 72 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~---------- 141 (252)
T PRK07856 72 RHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRP---------- 141 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCC----------
Confidence 6899999999753221 1223457899999999999988754 222238999999766532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
......|+.+|.+.+.+++.++.++ .+++++|+||.|.++..............+....+ ...+
T Consensus 142 --~~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~ 207 (252)
T PRK07856 142 --SPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVP------------LGRL 207 (252)
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCC------------CCCC
Confidence 1345789999999999999998875 38999999999987632210000011111211111 1125
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
...+|+|++++.++...... .+|..+.+.+|...
T Consensus 208 ~~p~~va~~~~~L~~~~~~~----------i~G~~i~vdgg~~~ 241 (252)
T PRK07856 208 ATPADIAWACLFLASDLASY----------VSGANLEVHGGGER 241 (252)
T ss_pred cCHHHHHHHHHHHcCcccCC----------ccCCEEEECCCcch
Confidence 67899999999888654322 44588888876533
No 123
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.5e-21 Score=181.51 Aligned_cols=230 Identities=16% Similarity=0.122 Sum_probs=159.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch-hhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY-ETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+.. ......... ...++.++.+|++|.+++.++++.+
T Consensus 5 ~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~i~~~~~~~~ 81 (254)
T PRK06114 5 DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEA---AGRRAIQIAADVTSKADLRAAVARTE 81 (254)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999975422 211111111 1346789999999999999888764
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++.+..+++|+.++..+++++ ++.+. ++||++||.+.+....
T Consensus 82 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~~~------- 153 (254)
T PRK06114 82 AELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGG-GSIVNIASMSGIIVNR------- 153 (254)
T ss_pred HHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCC-cEEEEECchhhcCCCC-------
Confidence 5799999999854321 22334678999999987776655 33443 3899999966543211
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..+...|+.+|++.+.+++.++.++ |+++++|+||.+.++........ .....+....+ + .
T Consensus 154 ---~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~-~~~~~~~~~~p--~----------~ 217 (254)
T PRK06114 154 ---GLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMV-HQTKLFEEQTP--M----------Q 217 (254)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccch-HHHHHHHhcCC--C----------C
Confidence 0124679999999999999998754 89999999999988753211111 11112222111 1 1
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
-+..++|++.+++.++...... ..|+++.+.+|.
T Consensus 218 r~~~~~dva~~~~~l~s~~~~~----------~tG~~i~~dgg~ 251 (254)
T PRK06114 218 RMAKVDEMVGPAVFLLSDAASF----------CTGVDLLVDGGF 251 (254)
T ss_pred CCcCHHHHHHHHHHHcCccccC----------cCCceEEECcCE
Confidence 2567899999999988654322 344788877653
No 124
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.90 E-value=1.1e-21 Score=182.39 Aligned_cols=230 Identities=14% Similarity=0.162 Sum_probs=164.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+|+||||+|+||.++++.|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++..
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~ 84 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ---LGGQAFACRCDITSEQELSALADFALS 84 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999865443322222111 1346888999999999998877654
Q ss_pred ---CccEEEEcccccCchh---hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY---AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~---~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.. .+. .+||++||.+....
T Consensus 85 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~----------- 152 (255)
T PRK06113 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGG-GVILTITSMAAENK----------- 152 (255)
T ss_pred HcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCC-cEEEEEecccccCC-----------
Confidence 6799999999754321 1233456799999999999998763 333 38999999665321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
..+...|+.+|.+.+.+++.++.+. |+++++++||.+..+.... ...+.+........+. .-+
T Consensus 153 -~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~-~~~~~~~~~~~~~~~~------------~~~ 218 (255)
T PRK06113 153 -NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKS-VITPEIEQKMLQHTPI------------RRL 218 (255)
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccc-ccCHHHHHHHHhcCCC------------CCC
Confidence 1345789999999999999998653 7999999999998764321 1122233333322211 125
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
...+|++++++.++...... ..|+++++.++...
T Consensus 219 ~~~~d~a~~~~~l~~~~~~~----------~~G~~i~~~gg~~~ 252 (255)
T PRK06113 219 GQPQDIANAALFLCSPAASW----------VSGQILTVSGGGVQ 252 (255)
T ss_pred cCHHHHHHHHHHHcCccccC----------ccCCEEEECCCccc
Confidence 68899999999988654321 34589999887543
No 125
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.90 E-value=1.2e-21 Score=182.68 Aligned_cols=229 Identities=16% Similarity=0.117 Sum_probs=162.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
.++|+++||||+|+||.++++.|+++|++|++++|+.+..+....... ....++.++.+|++|.++++++++..
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~---~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~ 86 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLE---ALGIDALWIAADVADEADIERLAEETLER 86 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH---hcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999996543322221111 12346788999999999998777653
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS-----DPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~-----~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..+..+..+++|+.++.++++++.+. +. ++||++||...+.....
T Consensus 87 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~-~~~v~~sS~~~~~~~~~------- 158 (259)
T PRK08213 87 FGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGY-GRIINVASVAGLGGNPP------- 158 (259)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCC-eEEEEECChhhccCCCc-------
Confidence 5799999999743221 12233568899999999999987654 33 38999999766543211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
...+...|+.+|++.+.+++.+++++ |+++++++||.+-++.... .++.+.+.+....++..
T Consensus 159 -~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~--~~~~~~~~~~~~~~~~~------------ 223 (259)
T PRK08213 159 -EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRG--TLERLGEDLLAHTPLGR------------ 223 (259)
T ss_pred -cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhh--hhHHHHHHHHhcCCCCC------------
Confidence 01245789999999999999998764 7999999999987763321 23344444444333322
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
+...+|++.++..++...... ..|+.+++.++
T Consensus 224 ~~~~~~va~~~~~l~~~~~~~----------~~G~~~~~~~~ 255 (259)
T PRK08213 224 LGDDEDLKGAALLLASDASKH----------ITGQILAVDGG 255 (259)
T ss_pred CcCHHHHHHHHHHHhCccccC----------ccCCEEEECCC
Confidence 345799999988887654332 33478887765
No 126
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.90 E-value=1.4e-21 Score=182.57 Aligned_cols=232 Identities=11% Similarity=0.040 Sum_probs=160.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++.+
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~ 83 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKS--ESNVDVSYIVADLTKREDLERTVKELKNI 83 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--hcCCceEEEEecCCCHHHHHHHHHHHHhh
Confidence 6789999999999999999999999999999999976543332222211 12346889999999999999888754
Q ss_pred -CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHH----HHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLL----ETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll----~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|++|||||..... ...++.+..+++|+.+...++ +.+++.+.+ +||++||...+..
T Consensus 84 g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g-~Ii~isS~~~~~~------------ 150 (263)
T PRK08339 84 GEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFG-RIIYSTSVAIKEP------------ 150 (263)
T ss_pred CCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEEcCccccCC------------
Confidence 579999999975332 122344678999988865554 445555544 8999999876432
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC---------CCcHHHHHHHHHcCCceeEEecCC
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP---------DMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
......|+++|.+.+.+++.++.++ |+++++|.||.|..+.... ..........+... ++
T Consensus 151 ~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p------ 222 (263)
T PRK08339 151 IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKP--IP------ 222 (263)
T ss_pred CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhcc--CC------
Confidence 1234679999999999999998775 7999999999997752110 00000111111111 11
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
..-+...+|+|.+++.++...... ..|+++.+.+|...|
T Consensus 223 ----~~r~~~p~dva~~v~fL~s~~~~~----------itG~~~~vdgG~~~~ 261 (263)
T PRK08339 223 ----LGRLGEPEEIGYLVAFLASDLGSY----------INGAMIPVDGGRLNS 261 (263)
T ss_pred ----cccCcCHHHHHHHHHHHhcchhcC----------ccCceEEECCCcccc
Confidence 112667899999999888654322 344788887776544
No 127
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.90 E-value=1.5e-21 Score=181.54 Aligned_cols=225 Identities=18% Similarity=0.141 Sum_probs=156.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+.+|+++||||+|+||+++++.|+++|++|+++++..+.. .... ...++.++.+|++|.+++.++++..
T Consensus 4 ~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l-----~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 75 (255)
T PRK06463 4 RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKEL-----REKGVFTIKCDVGNRDQVKKSKEVVEK 75 (255)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHH-----HhCCCeEEEecCCCHHHHHHHHHHHHH
Confidence 35689999999999999999999999999999887754311 1111 1125789999999999999988765
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHH----HHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNL----LETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~l----l~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||..... ...++.+..+++|+.++..+ ++.+++.+. ++||++||...++..
T Consensus 76 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-g~iv~isS~~~~~~~--------- 145 (255)
T PRK06463 76 EFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKN-GAIVNIASNAGIGTA--------- 145 (255)
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCC-cEEEEEcCHHhCCCC---------
Confidence 689999999985321 12233457899999996555 444554443 389999998776421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC---CCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP---DMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
......|++||++.+.+++.++.++ |+++++|+||.|-.+.... ......+...+....+
T Consensus 146 --~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------------ 211 (255)
T PRK06463 146 --AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV------------ 211 (255)
T ss_pred --CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC------------
Confidence 1234679999999999999998764 8999999999987653211 0001111111111111
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+...+|++++++.++...... ..|+.+.+.+|.
T Consensus 212 ~~~~~~~~~va~~~~~l~s~~~~~----------~~G~~~~~dgg~ 247 (255)
T PRK06463 212 LKTTGKPEDIANIVLFLASDDARY----------ITGQVIVADGGR 247 (255)
T ss_pred cCCCcCHHHHHHHHHHHcChhhcC----------CCCCEEEECCCe
Confidence 123567899999999988765422 344788887765
No 128
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.2e-21 Score=180.06 Aligned_cols=229 Identities=14% Similarity=0.105 Sum_probs=155.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCC-CCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNF-NNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+++|+++||||+|+||.+++++|+++|++|++.++. .+........... ....+..+.+|++|.+++..+++..
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS---NGGSAFSIGANLESLHGVEALYSSLDN 78 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHh---cCCceEEEecccCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999987643 2222222111111 1345778999999988877655432
Q ss_pred ---------CccEEEEcccccCchhhc----cChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ---------AFTHVMHLAAQAGVRYAM----QNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ---------~~d~vi~~Ag~~~~~~~~----~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||........ ++.+..+++|+.++..+++++.+.. ...+||++||...+...
T Consensus 79 ~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------ 152 (252)
T PRK12747 79 ELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL------ 152 (252)
T ss_pred HhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC------
Confidence 579999999975322111 2235688999999999888776532 12389999998765421
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.....|+.||++.+.+++.++.++ |+++++|+||.|.++....-.. ........... ..
T Consensus 153 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~-----------~~ 214 (252)
T PRK12747 153 ------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-DPMMKQYATTI-----------SA 214 (252)
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-CHHHHHHHHhc-----------Cc
Confidence 335789999999999999998765 8999999999998874321000 00111111100 01
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+.+++|+|.++..++...... ..|+.+.+.+|.
T Consensus 215 ~~~~~~~~dva~~~~~l~s~~~~~----------~~G~~i~vdgg~ 250 (252)
T PRK12747 215 FNRLGEVEDIADTAAFLASPDSRW----------VTGQLIDVSGGS 250 (252)
T ss_pred ccCCCCHHHHHHHHHHHcCccccC----------cCCcEEEecCCc
Confidence 123778999999999887654321 334788887653
No 129
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.89 E-value=1.9e-21 Score=180.32 Aligned_cols=224 Identities=13% Similarity=0.125 Sum_probs=160.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++++++||||+|+||..+++.|+++|++|++++|+.+........... ...++.++++|++|.++++++++..
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGA---LGTEVRGYAANVTDEEDVEATFAQIAED 79 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5688999999999999999999999999999999976443332222111 1346889999999999988877764
Q ss_pred --CccEEEEcccccCch-------------hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCC
Q 042406 154 --AFTHVMHLAAQAGVR-------------YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNK 214 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~-------------~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~ 214 (424)
++|+||||||..... ...++.+..+++|+.++.++++++. +......+|++||.+.|+.
T Consensus 80 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~-- 157 (253)
T PRK08217 80 FGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGN-- 157 (253)
T ss_pred cCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccCC--
Confidence 579999999964321 1122335678899999887765443 2222237999999877753
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecC
Q 042406 215 KVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAP 291 (424)
Q Consensus 215 ~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (424)
.+...|+.+|.+.+.+++.++++ .++++++++||.+.++.... ..+.+...+....+
T Consensus 158 -----------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~--~~~~~~~~~~~~~~------- 217 (253)
T PRK08217 158 -----------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA--MKPEALERLEKMIP------- 217 (253)
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc--cCHHHHHHHHhcCC-------
Confidence 34578999999999999998865 48999999999998875432 12233333332222
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+.+++|+|+++..++.... ..|++|++.++-
T Consensus 218 -----~~~~~~~~~~a~~~~~l~~~~~------------~~g~~~~~~gg~ 251 (253)
T PRK08217 218 -----VGRLGEPEEIAHTVRFIIENDY------------VTGRVLEIDGGL 251 (253)
T ss_pred -----cCCCcCHHHHHHHHHHHHcCCC------------cCCcEEEeCCCc
Confidence 1236688999999999885422 344899998764
No 130
>PRK09242 tropinone reductase; Provisional
Probab=99.89 E-value=2e-21 Score=180.95 Aligned_cols=230 Identities=15% Similarity=0.115 Sum_probs=162.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+.+|+++||||+|+||+.+++.|+++|++|++++|+.+........... .....++.++.+|++|.+++.++++.+
T Consensus 6 ~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 84 (257)
T PRK09242 6 RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAE-EFPEREVHGLAADVSDDEDRRAILDWVED 84 (257)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh-hCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999975443332222211 112346889999999999988887754
Q ss_pred ---CccEEEEcccccCc----hhhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV----RYAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||.... ....++.+..+.+|+.++.++++++. +.+. ++||++||...+...
T Consensus 85 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~ii~~sS~~~~~~~--------- 154 (257)
T PRK09242 85 HWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHAS-SAIVNIGSVSGLTHV--------- 154 (257)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-ceEEEECccccCCCC---------
Confidence 57999999997432 12233456789999999988888764 3343 389999998766431
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|+.+|.+.+.+++.++.++ |++++.++||.+.++..........+........+...
T Consensus 155 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~------------ 219 (257)
T PRK09242 155 ---RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRR------------ 219 (257)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCC------------
Confidence 345789999999999999988664 89999999999988754321111223333333222211
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
+...+|++.+++.++...... ..|+.+.+.++
T Consensus 220 ~~~~~~va~~~~~l~~~~~~~----------~~g~~i~~~gg 251 (257)
T PRK09242 220 VGEPEEVAAAVAFLCMPAASY----------ITGQCIAVDGG 251 (257)
T ss_pred CcCHHHHHHHHHHHhCccccc----------ccCCEEEECCC
Confidence 445799999999888654321 23477777654
No 131
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.89 E-value=1.9e-21 Score=180.79 Aligned_cols=229 Identities=14% Similarity=0.098 Sum_probs=160.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++.+|++|||||+|+||++++++|+++|++|++++|+.+........... ....+.++.+|++|.+++.++++..
T Consensus 6 ~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (254)
T PRK08085 6 SLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQ---EGIKAHAAPFNVTHKQEVEAAIEHIEK 82 (254)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh---cCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999975443332222211 1245788999999999998887654
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.. .+. .+||++||......
T Consensus 83 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~---------- 151 (254)
T PRK08085 83 DIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQA-GKIINICSMQSELG---------- 151 (254)
T ss_pred hcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-cEEEEEccchhccC----------
Confidence 579999999975321 12233457899999998888777654 333 38999999643211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|+.+|.+.+.+++.++.++ |+++++|+||.+.++..........+...+....+ ..-
T Consensus 152 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p------------~~~ 217 (254)
T PRK08085 152 --RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP------------AAR 217 (254)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC------------CCC
Confidence 1345789999999999999998764 89999999999998743211101112222222111 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+...+|++.+++.++...... ..|++..+.+|.
T Consensus 218 ~~~~~~va~~~~~l~~~~~~~----------i~G~~i~~dgg~ 250 (254)
T PRK08085 218 WGDPQELIGAAVFLSSKASDF----------VNGHLLFVDGGM 250 (254)
T ss_pred CcCHHHHHHHHHHHhCccccC----------CcCCEEEECCCe
Confidence 677899999999888754432 344677776653
No 132
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.9e-21 Score=179.56 Aligned_cols=229 Identities=13% Similarity=0.085 Sum_probs=160.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+.++|+++||||+|+||+++++.|+++|++|+++.|+............. ....++.++.+|++|.+++.++++++
T Consensus 2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (245)
T PRK12937 2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIE--AAGGRAIAVQADVADAAAVTRLFDAAET 79 (245)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHH--hcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 35678999999999999999999999999998888755322111111111 12356899999999999999988864
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.+.. ..++||++||...+.. .
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~------------~ 147 (245)
T PRK12937 80 AFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP------------L 147 (245)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC------------C
Confidence 6799999999754211 222345689999999999988876542 1238999998665432 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.+...|+.+|.+.+.+++.++.++ ++++++++||.+-++..... ..+.....+....+.. -+.+
T Consensus 148 ~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~-~~~~~~~~~~~~~~~~------------~~~~ 214 (245)
T PRK12937 148 PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG-KSAEQIDQLAGLAPLE------------RLGT 214 (245)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc-CCHHHHHHHHhcCCCC------------CCCC
Confidence 345789999999999999987664 79999999999877642111 1112333333332221 2557
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
++|++.+++.++...... ..|+.+++.++
T Consensus 215 ~~d~a~~~~~l~~~~~~~----------~~g~~~~~~~g 243 (245)
T PRK12937 215 PEEIAAAVAFLAGPDGAW----------VNGQVLRVNGG 243 (245)
T ss_pred HHHHHHHHHHHcCccccC----------ccccEEEeCCC
Confidence 899999999888654422 33478888764
No 133
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.89 E-value=2.8e-22 Score=178.03 Aligned_cols=291 Identities=19% Similarity=0.214 Sum_probs=212.6
Q ss_pred CCCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 73 RPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 73 ~~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
.+.+.+|-.+-|.|||||+|++++.+|++.|-+|++--|..+......+ ..-....+-++.-|+.|+++++++.+.
T Consensus 55 GRsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lk----vmGdLGQvl~~~fd~~DedSIr~vvk~ 130 (391)
T KOG2865|consen 55 GRSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLK----VMGDLGQVLFMKFDLRDEDSIRAVVKH 130 (391)
T ss_pred CcccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhhee----ecccccceeeeccCCCCHHHHHHHHHh
Confidence 4567788899999999999999999999999999999996543211111 111235788999999999999999998
Q ss_pred cCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHH
Q 042406 153 VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYA 232 (424)
Q Consensus 153 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~ 232 (424)
. .+|||+.|... +...-...++|+.+...|++.|++.|+. +||++|+.+.- -...+-|-
T Consensus 131 s--NVVINLIGrd~----eTknf~f~Dvn~~~aerlAricke~GVe-rfIhvS~Lgan--------------v~s~Sr~L 189 (391)
T KOG2865|consen 131 S--NVVINLIGRDY----ETKNFSFEDVNVHIAERLARICKEAGVE-RFIHVSCLGAN--------------VKSPSRML 189 (391)
T ss_pred C--cEEEEeecccc----ccCCcccccccchHHHHHHHHHHhhChh-heeehhhcccc--------------ccChHHHH
Confidence 8 99999998532 2222356789999999999999999997 99999986521 02346788
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHH
Q 042406 233 ATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312 (424)
Q Consensus 233 ~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 312 (424)
.+|.++|..+++.-- ..+|+||..|||..++ ++..+.....+=+.++++. .+....-..|||-|+|++|+.
T Consensus 190 rsK~~gE~aVrdafP----eAtIirPa~iyG~eDr---fln~ya~~~rk~~~~pL~~--~GekT~K~PVyV~DVaa~Ivn 260 (391)
T KOG2865|consen 190 RSKAAGEEAVRDAFP----EATIIRPADIYGTEDR---FLNYYASFWRKFGFLPLIG--KGEKTVKQPVYVVDVAAAIVN 260 (391)
T ss_pred HhhhhhHHHHHhhCC----cceeechhhhcccchh---HHHHHHHHHHhcCceeeec--CCcceeeccEEEehHHHHHHH
Confidence 999999999988643 4699999999998655 3444444444456677763 334566689999999999999
Q ss_pred HhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCC-----------------CC---
Q 042406 313 GLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR-----------------NG--- 372 (424)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-----------------~~--- 372 (424)
++.++. ..|++|..+++..+...|+++.+-+....-......++|- ..
T Consensus 261 AvkDp~------------s~Gktye~vGP~~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~a~~~~f~~~pf~~~~pln 328 (391)
T KOG2865|consen 261 AVKDPD------------SMGKTYEFVGPDRYQLSELVDIMYDMAREWPRYVRLPMPIFKAMAAARDFMIVPFPPPSPLN 328 (391)
T ss_pred hccCcc------------ccCceeeecCCchhhHHHHHHHHHHHHhhccccccCCcHHHHHHHhhhheeecCCCCCCCCC
Confidence 999885 3458999999999999999999988877644433333321 10
Q ss_pred -------CcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHH
Q 042406 373 -------DVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 373 -------~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~ 410 (424)
.....+++...--.+||..++ .+|...-+.+..|++.
T Consensus 329 ~d~ie~~~v~~~vlt~~~tleDLgv~~t-~le~~~~e~l~~yR~~ 372 (391)
T KOG2865|consen 329 RDQIERLTVTDLVLTGAPTLEDLGVVLT-KLELYPVEFLRQYRKG 372 (391)
T ss_pred HHHhhheeehhhhcCCCCcHhhcCceee-ecccccHHHHHHHhhc
Confidence 001112333333456888765 6776665666555554
No 134
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.89 E-value=2.6e-22 Score=183.71 Aligned_cols=176 Identities=22% Similarity=0.197 Sum_probs=136.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+..+.+|+|+|||||++||.++|.+|+++|..++.+.|..++++....+.+...... ++.++++|++|.+++.++++..
T Consensus 7 ~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~~ 85 (282)
T KOG1205|consen 7 MERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEWA 85 (282)
T ss_pred HHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHHH
Confidence 446789999999999999999999999999999999998887776655554443333 7999999999999999888554
Q ss_pred -----CccEEEEcccccCchhhccC----hHHHHHHHHHHHHHHH----HHHHhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRYAMQN----PNSYVESNIAGFVNLL----ETCKSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~~~~~----~~~~~~~N~~g~~~ll----~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|++|||||+......+.. ....+++|+.|+..+. ..+++.+ ..+||.+||...+-..
T Consensus 86 ~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~------- 157 (282)
T KOG1205|consen 86 IRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPL------- 157 (282)
T ss_pred HHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCC-------
Confidence 78999999999763222221 2358999999966554 4556666 3499999997775421
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---C--CcEEEEEeccccCC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---G--LSITGLRFFTVYGP 264 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~--i~~~~vrp~~v~G~ 264 (424)
+..+.|++||+|.+.+.+.+..+. + +++ +|.||.|-..
T Consensus 158 -----P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te 200 (282)
T KOG1205|consen 158 -----PFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETE 200 (282)
T ss_pred -----CcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeec
Confidence 223589999999999999999886 2 333 6899988654
No 135
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.89 E-value=1.4e-21 Score=181.28 Aligned_cols=227 Identities=13% Similarity=0.095 Sum_probs=158.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+++||++++++|+++|++|++++|+.. ........ ....++.++.+|++|.+++.++++..
T Consensus 5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 5 DLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVE---ALGRKFHFITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHH---HcCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999988532 11111111 12346889999999999999988764
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|++|||||...... ..++.+..+++|+.++..+.+++.. .+...+||++||...+...
T Consensus 80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~--------- 150 (251)
T PRK12481 80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG--------- 150 (251)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC---------
Confidence 6899999999754321 2334567899999998887776543 3322489999998766421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.....|+.||.+.+.+++.++.+ +|+++++|+||.|-.+....-.........+....+ . ..
T Consensus 151 ---~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p--~----------~~ 215 (251)
T PRK12481 151 ---IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIP--A----------SR 215 (251)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCC--C----------CC
Confidence 23467999999999999998875 489999999999977632110000011111221111 1 12
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
+...+|+|.+++.++...... ..|+++.+.+|
T Consensus 216 ~~~peeva~~~~~L~s~~~~~----------~~G~~i~vdgg 247 (251)
T PRK12481 216 WGTPDDLAGPAIFLSSSASDY----------VTGYTLAVDGG 247 (251)
T ss_pred CcCHHHHHHHHHHHhCccccC----------cCCceEEECCC
Confidence 567899999999988654432 34477777665
No 136
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.89 E-value=2.8e-21 Score=179.72 Aligned_cols=230 Identities=14% Similarity=0.086 Sum_probs=162.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|+++||||+|+||+.++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++++
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~ 83 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRA---AGGAAEALAFDIADEEAVAAAFARID 83 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 347899999999999999999999999999999999975433322221211 2346889999999999998888754
Q ss_pred ----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||..... ...++.+..+.+|+.++.++++++.+ .+.+ +||++||...+...
T Consensus 84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~~ss~~~~~~~-------- 154 (256)
T PRK06124 84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYG-RIIAITSIAGQVAR-------- 154 (256)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEeechhccCC--------
Confidence 579999999975432 12233457899999999888866543 4543 89999997654321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.....|+.+|.+.+.+++.++.+. ++++++|+||.+.++..........+...+.... + ..
T Consensus 155 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~--~----------~~ 218 (256)
T PRK06124 155 ----AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRT--P----------LG 218 (256)
T ss_pred ----CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcC--C----------CC
Confidence 234789999999999999987664 8999999999999885321110111222222111 1 12
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+++++|++++++.++...... ..|+.+.+.+|.
T Consensus 219 ~~~~~~~~a~~~~~l~~~~~~~----------~~G~~i~~dgg~ 252 (256)
T PRK06124 219 RWGRPEEIAGAAVFLASPAASY----------VNGHVLAVDGGY 252 (256)
T ss_pred CCCCHHHHHHHHHHHcCcccCC----------cCCCEEEECCCc
Confidence 3788999999999998775432 233677776553
No 137
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.1e-21 Score=181.00 Aligned_cols=226 Identities=14% Similarity=0.044 Sum_probs=158.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||++++++|+++|++|++++|+.+. ....++.++++|++|.+++.++++..
T Consensus 6 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~------------~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (260)
T PRK06523 6 ELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPD------------DLPEGVEFVAADLTTAEGCAAVARAVLE 73 (260)
T ss_pred CCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhh------------hcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999996431 01246889999999999988777654
Q ss_pred ---CccEEEEcccccCch------hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR------YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~------~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||..... ...++.+..+++|+.++.++++++ ++.+.+ +||++||...+...
T Consensus 74 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~ii~isS~~~~~~~------- 145 (260)
T PRK06523 74 RLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSG-VIIHVTSIQRRLPL------- 145 (260)
T ss_pred HcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCc-EEEEEecccccCCC-------
Confidence 579999999964211 123345678999999987775554 444443 89999997665321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC---------CcHHHHHHHHHcC-CceeE
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD---------MAYFFFTRDIIRG-KRITV 287 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~---------~~~~~~~~~~~~~-~~~~~ 287 (424)
..+...|+.+|.+.+.+++.++.++ |+++++|+||.|.+|..... .........+... ..++
T Consensus 146 ----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p- 220 (260)
T PRK06523 146 ----PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIP- 220 (260)
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCc-
Confidence 1245789999999999999998764 89999999999998743210 0000111111100 0011
Q ss_pred EecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 288 YEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 288 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
...+...+|+|++++.++...... ..|+.+.+.+|...|
T Consensus 221 ---------~~~~~~~~~va~~~~~l~s~~~~~----------~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 221 ---------LGRPAEPEEVAELIAFLASDRAAS----------ITGTEYVIDGGTVPT 259 (260)
T ss_pred ---------cCCCCCHHHHHHHHHHHhCccccc----------ccCceEEecCCccCC
Confidence 112557899999999988654322 344889998876554
No 138
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.5e-21 Score=179.27 Aligned_cols=228 Identities=16% Similarity=0.128 Sum_probs=163.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||.++++.|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 4 ~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 80 (250)
T PRK12939 4 NLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEA---AGGRAHAIAADLADPASVQRFFDAAAA 80 (250)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999999865443332222211 1346899999999999999888763
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ...+.+..+.+|+.++.++++++.+. +. .+||++||...+...
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------- 150 (250)
T PRK12939 81 ALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGR-GRIVNLASDTALWGA--------- 150 (250)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-eEEEEECchhhccCC---------
Confidence 6799999999754321 12233567889999999988877542 22 389999996654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.....|+.+|.+.+.+++.++.+ .++++++|+||.+.++....-.. ..+....... .....
T Consensus 151 ---~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~------------~~~~~ 214 (250)
T PRK12939 151 ---PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKG------------RALER 214 (250)
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhc------------CCCCC
Confidence 33467999999999999998765 38999999999998774321100 0122222221 12234
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+++++|+|++++.++...... ..|+.+.+.+|.
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~----------~~G~~i~~~gg~ 247 (250)
T PRK12939 215 LQVPDDVAGAVLFLLSDAARF----------VTGQLLPVNGGF 247 (250)
T ss_pred CCCHHHHHHHHHHHhCccccC----------ccCcEEEECCCc
Confidence 789999999999998764321 344888888764
No 139
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.1e-21 Score=183.07 Aligned_cols=227 Identities=15% Similarity=0.072 Sum_probs=158.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+....... . . ..++.++.+|++|.+++.++++.+
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~----~-~-~~~~~~~~~Dl~~~~~~~~~~~~~~~ 76 (261)
T PRK08265 3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA----S-L-GERARFIATDITDDAAIERAVATVVA 76 (261)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----H-h-CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999997543222111 1 1 346889999999999998888765
Q ss_pred ---CccEEEEcccccCch---hhccChHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR---YAMQNPNSYVESNIAGFVNLLETCKSS--DPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~---~~~~~~~~~~~~N~~g~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||..... ...++.+..+++|+.++.++++++... ....+||++||.+.+...
T Consensus 77 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~------------ 144 (261)
T PRK08265 77 RFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ------------ 144 (261)
T ss_pred HhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC------------
Confidence 689999999974321 123344678999999998888776542 122389999996553211
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC--CCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP--DMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.....|+.+|.+.+.+++.++.++ |+++++|+||.+.++-... .... .....+.. .. ....-+
T Consensus 145 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~-~~~~~~~~--~~---------~p~~r~ 212 (261)
T PRK08265 145 TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDR-AKADRVAA--PF---------HLLGRV 212 (261)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccch-hHHHHhhc--cc---------CCCCCc
Confidence 234679999999999999998764 8999999999987763210 0000 00001100 00 011125
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+|+|++++.++...... ..|+++.+.+|.
T Consensus 213 ~~p~dva~~~~~l~s~~~~~----------~tG~~i~vdgg~ 244 (261)
T PRK08265 213 GDPEEVAQVVAFLCSDAASF----------VTGADYAVDGGY 244 (261)
T ss_pred cCHHHHHHHHHHHcCccccC----------ccCcEEEECCCe
Confidence 67899999999998754322 344788887663
No 140
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.89 E-value=3.1e-21 Score=179.01 Aligned_cols=228 Identities=15% Similarity=0.126 Sum_probs=158.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||.+++++|+++|++|++++|+.+........... ....+.++++|++|.++++++++++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVA---AGGKAEALACHIGEMEQIDALFAHIRE 81 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999965433322222111 1245788999999999998887764
Q ss_pred ---CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+|||+||.... ....++.+..+++|+.++.++++++ ++.+.+ ++|++||...+..
T Consensus 82 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~~~~--------- 151 (252)
T PRK07035 82 RHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGG-SIVNVASVNGVSP--------- 151 (252)
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCc-EEEEECchhhcCC---------
Confidence 57999999996421 1122234578999999988777665 444433 8999998654331
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..+...|+.||++.+.+++.++.++ |+++++|+||.|..+..........+........+ ..
T Consensus 152 ---~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------------~~ 216 (252)
T PRK07035 152 ---GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP------------LR 216 (252)
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC------------CC
Confidence 1345789999999999999998765 89999999999977632211000112222222111 11
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
.+...+|+|++++.++...... ..|+++.+.+|
T Consensus 217 ~~~~~~~va~~~~~l~~~~~~~----------~~g~~~~~dgg 249 (252)
T PRK07035 217 RHAEPSEMAGAVLYLASDASSY----------TTGECLNVDGG 249 (252)
T ss_pred CcCCHHHHHHHHHHHhCccccC----------ccCCEEEeCCC
Confidence 2567899999999988765432 33477877654
No 141
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.89 E-value=3e-21 Score=179.38 Aligned_cols=225 Identities=15% Similarity=0.117 Sum_probs=161.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++.+|++|||||+|+||.++++.|+++|++|++++|+.+.. ... .......+.++.+|++|.+++.+++++.
T Consensus 12 ~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-----~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 85 (255)
T PRK06841 12 DLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-----EVA-AQLLGGNAKGLVCDVSDSQSVEAAVAAVIS 85 (255)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHH-HHhhCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999965321 111 1112345779999999999999888765
Q ss_pred ---CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||....... ..+.+..+++|+.++.++++++.. .+. ++||++||.......
T Consensus 86 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~~sS~~~~~~~--------- 155 (255)
T PRK06841 86 AFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGG-GKIVNLASQAGVVAL--------- 155 (255)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCC-ceEEEEcchhhccCC---------
Confidence 67999999998543211 223356899999999999888754 233 489999996543211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.....|+.+|.+.+.+++.++.++ |+++++|+||.|..+...... .......+....+ ...
T Consensus 156 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~------------~~~ 219 (255)
T PRK06841 156 ---ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAW-AGEKGERAKKLIP------------AGR 219 (255)
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCccccccc-chhHHHHHHhcCC------------CCC
Confidence 334689999999999999998764 899999999999887432110 0011111111111 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+.+++|+|++++.++...... ..|+++.+.+|.
T Consensus 220 ~~~~~~va~~~~~l~~~~~~~----------~~G~~i~~dgg~ 252 (255)
T PRK06841 220 FAYPEEIAAAALFLASDAAAM----------ITGENLVIDGGY 252 (255)
T ss_pred CcCHHHHHHHHHHHcCccccC----------ccCCEEEECCCc
Confidence 789999999999998765432 344788887764
No 142
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2e-21 Score=181.25 Aligned_cols=232 Identities=12% Similarity=0.081 Sum_probs=161.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||+++++.|+++|++|++++|+.+..+......... ....++.++.+|++|.+++.++++..
T Consensus 4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 82 (260)
T PRK07063 4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD-VAGARVLAVPADVTDAASVAAAVAAAEE 82 (260)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-cCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999765443332222211 12346889999999999998888754
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.. .+. .+||++||...+...
T Consensus 83 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------- 152 (260)
T PRK07063 83 AFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGR-GSIVNIASTHAFKII--------- 152 (260)
T ss_pred HhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCC-eEEEEECChhhccCC---------
Confidence 679999999975321 12234467899999999888777643 333 389999997654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC----CcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD----MAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
.....|+.+|++.+.+++.++.++ |+++++|+||.|-.+..... ..............+.
T Consensus 153 ---~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 219 (260)
T PRK07063 153 ---PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM---------- 219 (260)
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC----------
Confidence 334679999999999999998775 79999999999876632100 0000011111111110
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.-+...+|+|.+++.++...... ..|+.+.+.+|..
T Consensus 220 --~r~~~~~~va~~~~fl~s~~~~~----------itG~~i~vdgg~~ 255 (260)
T PRK07063 220 --KRIGRPEEVAMTAVFLASDEAPF----------INATCITIDGGRS 255 (260)
T ss_pred --CCCCCHHHHHHHHHHHcCccccc----------cCCcEEEECCCee
Confidence 11557899999999988765432 3447787776643
No 143
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.8e-21 Score=180.60 Aligned_cols=228 Identities=13% Similarity=0.048 Sum_probs=159.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+..+........ ...++.++.+|++|.+++.++++.+
T Consensus 7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 83 (263)
T PRK07814 7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRA---AGRRAHVVAADLAHPEATAGLAGQAVE 83 (263)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999975433322221111 1346889999999999998888754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh-----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS-----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~-----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+|||+||...... ..++.+..+++|+.++.++++++.. .+. .+||++||......
T Consensus 84 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-g~iv~~sS~~~~~~--------- 153 (263)
T PRK07814 84 AFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGG-GSVINISSTMGRLA--------- 153 (263)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCC-eEEEEEccccccCC---------
Confidence 6799999999743321 2234567899999999999998864 233 38999999544321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|+++|.+.+.+++.++.+. ++++++|+||.+..+....-..-..+...+....+ ...
T Consensus 154 ---~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~ 218 (263)
T PRK07814 154 ---GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATP------------LRR 218 (263)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCC------------CCC
Confidence 1446789999999999999998765 68999999999876532110000112112211111 112
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
....+|+|++++.++...... ..++.+.+.++
T Consensus 219 ~~~~~~va~~~~~l~~~~~~~----------~~g~~~~~~~~ 250 (263)
T PRK07814 219 LGDPEDIAAAAVYLASPAGSY----------LTGKTLEVDGG 250 (263)
T ss_pred CcCHHHHHHHHHHHcCccccC----------cCCCEEEECCC
Confidence 457899999999988654321 23467777654
No 144
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.7e-21 Score=179.55 Aligned_cols=229 Identities=14% Similarity=0.080 Sum_probs=160.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+..+........ ...++..+.+|++|.+++.+++++.
T Consensus 6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T PRK05867 6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGT---SGGKVVPVCCDVSQHQQVTSMLDQVTA 82 (253)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh---cCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999976543332222211 1246789999999999998888754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.++..+++++.. .+...++|++||.+..-..
T Consensus 83 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 153 (253)
T PRK05867 83 ELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN--------- 153 (253)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC---------
Confidence 6899999999754321 1223356889999999888887643 2222379999886542110
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.......|+.+|++.+.+++.++.++ |+++++|+||.|-.+..... ...........+ . ..
T Consensus 154 -~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~---~~~~~~~~~~~~--~----------~r 217 (253)
T PRK05867 154 -VPQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY---TEYQPLWEPKIP--L----------GR 217 (253)
T ss_pred -CCCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc---hHHHHHHHhcCC--C----------CC
Confidence 00224679999999999999998764 89999999999987743211 111122222111 1 12
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+...+|+|++++.++...... ..|+++.+.+|.
T Consensus 218 ~~~p~~va~~~~~L~s~~~~~----------~tG~~i~vdgG~ 250 (253)
T PRK05867 218 LGRPEELAGLYLYLASEASSY----------MTGSDIVIDGGY 250 (253)
T ss_pred CcCHHHHHHHHHHHcCcccCC----------cCCCeEEECCCc
Confidence 667899999999988754432 445788887764
No 145
>PRK06398 aldose dehydrogenase; Validated
Probab=99.89 E-value=3e-21 Score=179.88 Aligned_cols=221 Identities=14% Similarity=0.096 Sum_probs=156.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||++++++|+++|++|++++|+... ..++.++.+|++|+++++++++.+
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~--------------~~~~~~~~~D~~~~~~i~~~~~~~~~ 68 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS--------------YNDVDYFKVDVSNKEQVIKGIDYVIS 68 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc--------------cCceEEEEccCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999985431 126789999999999998888754
Q ss_pred ---CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||....... .++.+..+++|+.|+.++++++.+ .+. ++||++||...+..
T Consensus 69 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~---------- 137 (258)
T PRK06398 69 KYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDK-GVIINIASVQSFAV---------- 137 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-eEEEEeCcchhccC----------
Confidence 58999999997543221 222356789999999888777643 333 48999999776642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCC------CcHHHHHHHHHcCCceeEEecCCCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPD------MAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
..+...|+.+|++.+.+++.++.++ ++++++|+||.+..+..... .....+...... + ...
T Consensus 138 --~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~ 206 (258)
T PRK06398 138 --TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE------W---GEM 206 (258)
T ss_pred --CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh------h---hhc
Confidence 1456789999999999999998875 49999999999877632100 000000000000 0 000
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.....+...+|+|++++.++...... ..|+++.+.+|.
T Consensus 207 ~~~~~~~~p~eva~~~~~l~s~~~~~----------~~G~~i~~dgg~ 244 (258)
T PRK06398 207 HPMKRVGKPEEVAYVVAFLASDLASF----------ITGECVTVDGGL 244 (258)
T ss_pred CCcCCCcCHHHHHHHHHHHcCcccCC----------CCCcEEEECCcc
Confidence 11123667899999999888654321 334778777764
No 146
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.89 E-value=1.5e-21 Score=181.03 Aligned_cols=228 Identities=18% Similarity=0.117 Sum_probs=159.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|++|||||+|+||+.++++|+++|++|++++|+. .. .....+.++++|++|.+++.++++++
T Consensus 5 ~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (252)
T PRK08220 5 DFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LT---QEDYPFATFVLDVSDAAAVAQVCQRLLA 72 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hh---hcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999853 01 11346889999999999999988764
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.. .+.+ +||++||......
T Consensus 73 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~~ss~~~~~~---------- 141 (252)
T PRK08220 73 ETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSG-AIVTVGSNAAHVP---------- 141 (252)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC-EEEEECCchhccC----------
Confidence 4799999999854321 2334567899999999999888753 3333 8999999755321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|+.+|.+.+.+++.++++ .|+++++++||.++++....-............+..... ........
T Consensus 142 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 215 (252)
T PRK08220 142 --RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQF----KLGIPLGK 215 (252)
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHH----hhcCCCcc
Confidence 134578999999999999999876 589999999999999843210000000000000000000 00111234
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+++++|+|++++.++...... ..++++.+.+|.
T Consensus 216 ~~~~~dva~~~~~l~~~~~~~----------~~g~~i~~~gg~ 248 (252)
T PRK08220 216 IARPQEIANAVLFLASDLASH----------ITLQDIVVDGGA 248 (252)
T ss_pred cCCHHHHHHHHHHHhcchhcC----------ccCcEEEECCCe
Confidence 889999999999988654322 334677777653
No 147
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.89 E-value=2.9e-21 Score=179.18 Aligned_cols=226 Identities=14% Similarity=0.092 Sum_probs=158.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||+++++.|+++|++|++.++...... ..... .. ..++.++++|++|.+++.+++++.
T Consensus 2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~---~~~~~-~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (253)
T PRK08642 2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAA---EALAD-EL-GDRAIALQADVTDREQVQAMFATATE 76 (253)
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHH-Hh-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789999999999999999999999999998766432111 11111 11 246889999999999999888764
Q ss_pred ----CccEEEEcccccCc----------hhhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV----------RYAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKK 215 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~----------~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~ 215 (424)
++|+||||||.... ....++.+..+++|+.++.++++++.. .+. .+||++||.....
T Consensus 77 ~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~iss~~~~~---- 151 (253)
T PRK08642 77 HFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGF-GRIINIGTNLFQN---- 151 (253)
T ss_pred HhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCC-eEEEEECCccccC----
Confidence 27999999986311 111223456899999999999888753 333 3899999854322
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCC
Q 042406 216 VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 216 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
+..+...|+.+|.+.+.+++.+++++ |+++++|+||.+..+...... .......+... .++
T Consensus 152 --------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~--~~~----- 215 (253)
T PRK08642 152 --------PVVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-PDEVFDLIAAT--TPL----- 215 (253)
T ss_pred --------CCCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-CHHHHHHHHhc--CCc-----
Confidence 11455789999999999999998774 799999999999775322111 11222222221 111
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+.+.+|++.++..++...... ..|+.+.+.+|.
T Consensus 216 -----~~~~~~~~va~~~~~l~~~~~~~----------~~G~~~~vdgg~ 250 (253)
T PRK08642 216 -----RKVTTPQEFADAVLFFASPWARA----------VTGQNLVVDGGL 250 (253)
T ss_pred -----CCCCCHHHHHHHHHHHcCchhcC----------ccCCEEEeCCCe
Confidence 23788999999999998765432 445788887763
No 148
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.89 E-value=3.4e-21 Score=179.45 Aligned_cols=227 Identities=14% Similarity=0.139 Sum_probs=159.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+.+|+||||||+|+||.++++.|+++|++|++++|+ +..+....... . ...++.++.+|++|.+++.++++++
T Consensus 12 ~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~-~--~~~~~~~~~~D~~~~~~i~~~~~~~~~ 87 (258)
T PRK06935 12 SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIE-K--EGRKVTFVQVDLTKPESAEKVVKEALE 87 (258)
T ss_pred cCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHH-h--cCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999996 22222111111 1 1346889999999999999888865
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|++|||||...... ..++.+..+++|+.++.++++++. +.+.+ ++|++||...+...
T Consensus 88 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~--------- 157 (258)
T PRK06935 88 EFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSG-KIINIASMLSFQGG--------- 157 (258)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCe-EEEEECCHHhccCC---------
Confidence 5799999999754221 122345789999999877776554 44433 89999998765421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.....|+.+|.+.+.+++.+++++ |+++++|+||.|..+....-.........+....+ ..-
T Consensus 158 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~ 222 (258)
T PRK06935 158 ---KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIP------------AGR 222 (258)
T ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCC------------CCC
Confidence 234689999999999999998765 89999999999987743210000111111111111 112
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
+...+|++.+++.++...... ..|+++.+.+|
T Consensus 223 ~~~~~dva~~~~~l~s~~~~~----------~~G~~i~~dgg 254 (258)
T PRK06935 223 WGEPDDLMGAAVFLASRASDY----------VNGHILAVDGG 254 (258)
T ss_pred CCCHHHHHHHHHHHcChhhcC----------CCCCEEEECCC
Confidence 677899999999888654432 34478887765
No 149
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.89 E-value=4.2e-22 Score=175.70 Aligned_cols=183 Identities=26% Similarity=0.346 Sum_probs=142.3
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEEc
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHL 161 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~~ 161 (424)
|+|+||||++|+.++++|+++|++|+++.|+.++... ..+++++.+|+.|.+++.++++++ |+||++
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-----------~~~~~~~~~d~~d~~~~~~al~~~--d~vi~~ 67 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-----------SPGVEIIQGDLFDPDSVKAALKGA--DAVIHA 67 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-----------CTTEEEEESCTTCHHHHHHHHTTS--SEEEEC
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-----------ccccccceeeehhhhhhhhhhhhc--chhhhh
Confidence 7999999999999999999999999999997543221 579999999999999999999977 999999
Q ss_pred ccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 042406 162 AAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAI 241 (424)
Q Consensus 162 Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~ 241 (424)
++.... +...+.++++++++++++ ++|++||.++|+........... .....|...|..+|.+
T Consensus 68 ~~~~~~-------------~~~~~~~~~~a~~~~~~~-~~v~~s~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~e~~ 130 (183)
T PF13460_consen 68 AGPPPK-------------DVDAAKNIIEAAKKAGVK-RVVYLSSAGVYRDPPGLFSDEDK---PIFPEYARDKREAEEA 130 (183)
T ss_dssp CHSTTT-------------HHHHHHHHHHHHHHTTSS-EEEEEEETTGTTTCTSEEEGGTC---GGGHHHHHHHHHHHHH
T ss_pred hhhhcc-------------cccccccccccccccccc-cceeeeccccCCCCCcccccccc---cchhhhHHHHHHHHHH
Confidence 975331 167788999999999976 99999999999854332111111 1125688888888877
Q ss_pred HHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhh
Q 042406 242 AHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 242 ~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
++ ..+++++++||+.+||+.... ..++. ..+....++|+++|+|++++.++++
T Consensus 131 ~~----~~~~~~~ivrp~~~~~~~~~~----------------~~~~~--~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 131 LR----ESGLNWTIVRPGWIYGNPSRS----------------YRLIK--EGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp HH----HSTSEEEEEEESEEEBTTSSS----------------EEEES--STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred HH----hcCCCEEEEECcEeEeCCCcc----------------eeEEe--ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 74 349999999999999985321 11111 1345556899999999999998864
No 150
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.89 E-value=1.8e-21 Score=181.33 Aligned_cols=234 Identities=17% Similarity=0.118 Sum_probs=162.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++++++||||+|+||++++++|+++|++|++++|+.+.. ........ ...++.++.+|++|.+++.+++++.
T Consensus 4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRA---LQPRAEFVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 47789999999999999999999999999999999976543 21111111 2346899999999999999888764
Q ss_pred ---CccEEEEcccccCch---hhccChHHHHHHHHHHHHHHHHHHHh---cCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR---YAMQNPNSYVESNIAGFVNLLETCKS---SDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~---~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||..... ...++.+..+++|+.++.++.+++.+ ... ++||++||...+..
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~iv~~ss~~~~~~------------ 146 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASR-GAIVNISSKTALTG------------ 146 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccC-cEEEEECCHHhccC------------
Confidence 679999999964321 11133467899999999888887653 222 38999999665432
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCC--C--cHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPD--M--AYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
..+...|+.||++.+.+++.++.+ .+++++.|+||.|++|..... . ........+... .+. +
T Consensus 147 ~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~------~--- 215 (258)
T PRK08628 147 QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK--IPL------G--- 215 (258)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc--CCc------c---
Confidence 134578999999999999999865 389999999999999742110 0 000011111111 111 0
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHH
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSR 348 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e 348 (424)
..++..+|+|++++.++...... ..|+.+.+.++. ..+++
T Consensus 216 ~~~~~~~dva~~~~~l~~~~~~~----------~~g~~~~~~gg~-~~~~~ 255 (258)
T PRK08628 216 HRMTTAEEIADTAVFLLSERSSH----------TTGQWLFVDGGY-VHLDR 255 (258)
T ss_pred ccCCCHHHHHHHHHHHhChhhcc----------ccCceEEecCCc-ccccc
Confidence 13678899999999988775321 234778776654 44443
No 151
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.89 E-value=3.4e-21 Score=181.47 Aligned_cols=228 Identities=15% Similarity=0.145 Sum_probs=159.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||+++++.|+++|++|++++|+.+........... ...++.++++|++|.+++.++++..
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 83 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKA---AGGEALAVKADVLDKESLEQARQQILE 83 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999975433222221111 1246889999999999998887753
Q ss_pred ---CccEEEEcccccCchh-------------------hccChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCC
Q 042406 154 ---AFTHVMHLAAQAGVRY-------------------AMQNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSS 207 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~-------------------~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~ 207 (424)
++|+||||||...... ..++.+..+++|+.++..++++ +++.+. .+||++||.
T Consensus 84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~ii~isS~ 162 (278)
T PRK08277 84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKG-GNIINISSM 162 (278)
T ss_pred HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-cEEEEEccc
Confidence 6799999999643211 1223457899999998766554 444443 389999998
Q ss_pred cccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC-----CCcHHHHHHHH
Q 042406 208 SVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP-----DMAYFFFTRDI 279 (424)
Q Consensus 208 ~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~-----~~~~~~~~~~~ 279 (424)
..+... .+...|+.+|++.+.+++.++.++ |+++++|+||.|.++.... +.........+
T Consensus 163 ~~~~~~------------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~ 230 (278)
T PRK08277 163 NAFTPL------------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKI 230 (278)
T ss_pred hhcCCC------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHH
Confidence 776521 345789999999999999998876 7999999999999874321 00001111111
Q ss_pred HcCCceeEEecCCCCccccccccHHHHHHHHHHHhhh-ccccCCCCCCCCCCCCcceEEcCCC
Q 042406 280 IRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT-AKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
....+ ..-+...+|+|++++.++.. .... ..|.++.+.+|
T Consensus 231 ~~~~p------------~~r~~~~~dva~~~~~l~s~~~~~~----------~tG~~i~vdgG 271 (278)
T PRK08277 231 LAHTP------------MGRFGKPEELLGTLLWLADEKASSF----------VTGVVLPVDGG 271 (278)
T ss_pred hccCC------------ccCCCCHHHHHHHHHHHcCccccCC----------cCCCEEEECCC
Confidence 11111 11266789999999988775 3321 34477888765
No 152
>PRK08589 short chain dehydrogenase; Validated
Probab=99.89 E-value=2.1e-21 Score=182.34 Aligned_cols=231 Identities=13% Similarity=0.085 Sum_probs=157.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|++|||||+|+||+++++.|+++|++|++++|+ +........... ...++.++.+|++|.+++.++++.+
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKS---NGGKAKAYHVDISDEQQVKDFASEIKE 78 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHh---cCCeEEEEEeecCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999997 433332222211 1346889999999999998888764
Q ss_pred ---CccEEEEcccccCc-hh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-RY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.... .. ..+..+..+++|+.++..+++++ ++.+ .+||++||...+...
T Consensus 79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~-------- 148 (272)
T PRK08589 79 QFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQAAD-------- 148 (272)
T ss_pred HcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhcCCC--------
Confidence 57999999998532 11 11223568899999987666654 3333 389999997665421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC--CcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD--MAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.....|+.||++.+.+++.++.++ |+++++|+||.|..+....- .....+......... .. ..
T Consensus 149 ----~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~ 216 (272)
T PRK08589 149 ----LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQK-WM-------TP 216 (272)
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhh-cc-------CC
Confidence 234789999999999999998765 79999999999987632210 000000000000000 00 00
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..-+...+|++++++.++...... ..|+.+.+.++.
T Consensus 217 ~~~~~~~~~va~~~~~l~s~~~~~----------~~G~~i~vdgg~ 252 (272)
T PRK08589 217 LGRLGKPEEVAKLVVFLASDDSSF----------ITGETIRIDGGV 252 (272)
T ss_pred CCCCcCHHHHHHHHHHHcCchhcC----------cCCCEEEECCCc
Confidence 112567899999999988754422 344778887664
No 153
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.89 E-value=3.8e-21 Score=177.60 Aligned_cols=226 Identities=13% Similarity=0.108 Sum_probs=158.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||+++++.|+++|++|+++.|+............. ....++.++.+|++|.+++.+++++.
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIG--ALGGKALAVQGDVSDAESVERAVDEAKAE 80 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHH--hcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 5678999999999999999999999999998888865422111111111 12356889999999999998888754
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCC-cccCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSS-SVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~-~vyg~~~~~~~~e~~ 222 (424)
++|+|||+||...... ..+..+..+.+|+.++.++++++... +. ++||++||. ++++.
T Consensus 81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~v~iss~~~~~~~---------- 149 (248)
T PRK05557 81 FGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRS-GRIINISSVVGLMGN---------- 149 (248)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-eEEEEEcccccCcCC----------
Confidence 5799999999754321 12234568899999999998887653 33 379999985 34442
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.....|+.+|.+.+.+++.++++. ++++++++||.+.++.... ....+........+ ...
T Consensus 150 ---~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~--~~~~~~~~~~~~~~------------~~~ 212 (248)
T PRK05557 150 ---PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDA--LPEDVKEAILAQIP------------LGR 212 (248)
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccc--cChHHHHHHHhcCC------------CCC
Confidence 235789999999999998887543 8999999999987653321 11223333322221 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+.+++|++.++..++...... ..++.|++.++-
T Consensus 213 ~~~~~~va~~~~~l~~~~~~~----------~~g~~~~i~~~~ 245 (248)
T PRK05557 213 LGQPEEIASAVAFLASDEAAY----------ITGQTLHVNGGM 245 (248)
T ss_pred CcCHHHHHHHHHHHcCcccCC----------ccccEEEecCCc
Confidence 678999999998877653211 344899998753
No 154
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.89 E-value=2.4e-21 Score=180.42 Aligned_cols=235 Identities=14% Similarity=0.106 Sum_probs=156.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLL-ERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+++|+++||||+|+||.++++.|+++|++|++++++................ ...++.++++|++|.+++.++++.+
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 85 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKA 85 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHH
Confidence 5678999999999999999999999999988887654322222222211111 1346889999999999999888764
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.... ...++++++|+......
T Consensus 86 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~------------ 153 (257)
T PRK12744 86 AFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT------------ 153 (257)
T ss_pred hhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC------------
Confidence 689999999974321 2233456789999999999999886542 11256665333222110
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.....|+.||++.|.+++.+++++ |+++++++||.+.++...+.... .. ......... ........+.+
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~-~~---~~~~~~~~~----~~~~~~~~~~~ 225 (257)
T PRK12744 154 PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGA-EA---VAYHKTAAA----LSPFSKTGLTD 225 (257)
T ss_pred CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccccc-ch---hhccccccc----ccccccCCCCC
Confidence 234789999999999999998875 69999999999987643211100 00 000000000 01111124788
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
++|+|.++..++..... ..|+++++.+|.
T Consensus 226 ~~dva~~~~~l~~~~~~-----------~~g~~~~~~gg~ 254 (257)
T PRK12744 226 IEDIVPFIRFLVTDGWW-----------ITGQTILINGGY 254 (257)
T ss_pred HHHHHHHHHHhhcccce-----------eecceEeecCCc
Confidence 99999999999884221 234789988764
No 155
>PRK06196 oxidoreductase; Provisional
Probab=99.88 E-value=4.2e-21 Score=184.10 Aligned_cols=225 Identities=14% Similarity=0.048 Sum_probs=150.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+|+||||+|+||.+++++|+++|++|++++|+.+......... .++.++.+|++|.++++++++.+
T Consensus 23 ~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l-------~~v~~~~~Dl~d~~~v~~~~~~~~~ 95 (315)
T PRK06196 23 DLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-------DGVEVVMLDLADLESVRAFAERFLD 95 (315)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-------hhCeEEEccCCCHHHHHHHHHHHHh
Confidence 357899999999999999999999999999999999754332221111 24789999999999999888653
Q ss_pred ---CccEEEEcccccCch--hhccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCC-CCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR--YAMQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGV-NKKVPFSEKDR 223 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~--~~~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~-~~~~~~~e~~~ 223 (424)
++|+||||||..... ...++.+..+++|+.|+.++++ .+++.+. .+||++||.+.... ..........
T Consensus 96 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~-~~iV~vSS~~~~~~~~~~~~~~~~~- 173 (315)
T PRK06196 96 SGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAG-ARVVALSSAGHRRSPIRWDDPHFTR- 173 (315)
T ss_pred cCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CeEEEECCHHhccCCCCccccCccC-
Confidence 579999999975432 1223457789999999665555 4455543 38999999754321 1111111111
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
+..+...|+.||++.+.+++.+++++ |+++++|+||.|.++......................+ ...+
T Consensus 174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 244 (315)
T PRK06196 174 GYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPI---------DPGF 244 (315)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhh---------hhhc
Confidence 22445789999999999999987654 89999999999999854321100000000000000000 0024
Q ss_pred ccHHHHHHHHHHHhhhcc
Q 042406 301 TYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~ 318 (424)
...+|+|.+++.++..+.
T Consensus 245 ~~~~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 245 KTPAQGAATQVWAATSPQ 262 (315)
T ss_pred CCHhHHHHHHHHHhcCCc
Confidence 568999999998886543
No 156
>PRK08643 acetoin reductase; Validated
Probab=99.88 E-value=5.9e-21 Score=177.57 Aligned_cols=227 Identities=15% Similarity=0.091 Sum_probs=156.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||.++++.|+++|++|++++|+.+........... ...++.++++|++|++++.++++..
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 78 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSK---DGGKAIAVKADVSDRDQVFAAVRQVVDTFG 78 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999975443332222211 1346889999999999998888765
Q ss_pred CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||....... .++.+..+++|+.++..+++++.+ .+...+||++||...+...
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 146 (256)
T PRK08643 79 DLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN------------ 146 (256)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC------------
Confidence 57999999997543211 223356899999998777666543 2323489999996543211
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC---------CcHHHHHHHHHcCCceeEEecCCC
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD---------MAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
.....|+.+|.+.+.+++.++.++ |+++++|+||.+.+|..... .........+... +
T Consensus 147 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------- 216 (256)
T PRK08643 147 PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKD--I-------- 216 (256)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhcc--C--------
Confidence 235789999999999999988753 89999999999988732100 0000000011110 0
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...-+...+|+|.++..++...... .+|+++.+.+|.
T Consensus 217 --~~~~~~~~~~va~~~~~L~~~~~~~----------~~G~~i~vdgg~ 253 (256)
T PRK08643 217 --TLGRLSEPEDVANCVSFLAGPDSDY----------ITGQTIIVDGGM 253 (256)
T ss_pred --CCCCCcCHHHHHHHHHHHhCccccC----------ccCcEEEeCCCe
Confidence 0112567899999999888665432 344788887664
No 157
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.88 E-value=4.3e-21 Score=179.24 Aligned_cols=210 Identities=15% Similarity=0.107 Sum_probs=151.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+++||||||+|+||.++++.|+++|++|++++|+............. ...++.++.+|++|.+++.++++.+
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 77 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELAD---HGGEALVVPTDVSDAEACERLIEAAVARFG 77 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999975433222111111 2346889999999999999888765
Q ss_pred CccEEEEcccccCchhhcc-----ChHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRYAMQ-----NPNSYVESNIAGFVNLLETCKSS---DPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~-----~~~~~~~~N~~g~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||........+ .....+++|+.++.++++.+... +. +++|++||...+...
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~iv~~sS~~~~~~~------------ 144 (263)
T PRK06181 78 GIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASR-GQIVVVSSLAGLTGV------------ 144 (263)
T ss_pred CCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CEEEEEecccccCCC------------
Confidence 6799999999755432222 23567999999999999887532 22 389999998776521
Q ss_pred CCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.+...|+.+|.+.+.+++.++.+ .++++++++||.+.++.... ... ..+.+... .+.....+++
T Consensus 145 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~------~~~--~~~~~~~~-----~~~~~~~~~~ 211 (263)
T PRK06181 145 PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKR------ALD--GDGKPLGK-----SPMQESKIMS 211 (263)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchh------hcc--cccccccc-----ccccccCCCC
Confidence 34578999999999999888754 38999999999998763221 000 01111111 1122236899
Q ss_pred HHHHHHHHHHHhhhc
Q 042406 303 IDDIVKGCLAGLDTA 317 (424)
Q Consensus 303 v~Dva~a~~~~~~~~ 317 (424)
++|+|++++.+++..
T Consensus 212 ~~dva~~i~~~~~~~ 226 (263)
T PRK06181 212 AEECAEAILPAIARR 226 (263)
T ss_pred HHHHHHHHHHHhhCC
Confidence 999999999999754
No 158
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.88 E-value=6e-21 Score=177.18 Aligned_cols=227 Identities=11% Similarity=0.092 Sum_probs=157.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||+++++.|+++|++|++++|+.+........... ...++.++++|++|.++++++++.+
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQ---FPGQVLTVQMDVRNPEDVQKMVEQIDEKFG 77 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999975443332222211 1246889999999999999888765
Q ss_pred CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.+ .+...+||++||...+.. .
T Consensus 78 ~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~------------~ 145 (252)
T PRK07677 78 RIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDA------------G 145 (252)
T ss_pred CccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccC------------C
Confidence 679999999864321 12223467899999999999888743 222348999998754321 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEEeccccCCCCCCCCc-HHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY----GLSITGLRFFTVYGPWGRPDMA-YFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~----~i~~~~vrp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.....|+.+|.+.+.+++.++.++ |+++++|+||.+.++....... .......+.+..+. .-+
T Consensus 146 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 213 (252)
T PRK07677 146 PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL------------GRL 213 (252)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC------------CCC
Confidence 234679999999999999987663 8999999999998543211100 11222233222111 126
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+|+++++..++...... ..|+.+.+.+|.
T Consensus 214 ~~~~~va~~~~~l~~~~~~~----------~~g~~~~~~gg~ 245 (252)
T PRK07677 214 GTPEEIAGLAYFLLSDEAAY----------INGTCITMDGGQ 245 (252)
T ss_pred CCHHHHHHHHHHHcCccccc----------cCCCEEEECCCe
Confidence 67899999998887654321 344677777653
No 159
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.88 E-value=4.8e-21 Score=178.65 Aligned_cols=231 Identities=11% Similarity=0.049 Sum_probs=154.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc-hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
..+++|+++||||+++||++++++|+++|++|++++|.... ......... ......+.++.+|++|+++++++++.+
T Consensus 4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~ 81 (260)
T PRK08416 4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLE--QKYGIKAKAYPLNILEPETYKELFKKI 81 (260)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--HhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 35788999999999999999999999999999988764322 111111111 112347889999999999999888765
Q ss_pred -----CccEEEEcccccCc-------hh---hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCC
Q 042406 154 -----AFTHVMHLAAQAGV-------RY---AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNK 214 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~-------~~---~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~ 214 (424)
++|+||||||.... .. ...+....+++|+.+...+.+.+ ++.+. ++||++||.+.+..
T Consensus 82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~-- 158 (260)
T PRK08416 82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGG-GSIISLSSTGNLVY-- 158 (260)
T ss_pred HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCC-EEEEEEeccccccC--
Confidence 58999999986421 11 11223457888888866655544 43333 38999999654321
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecC
Q 042406 215 KVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAP 291 (424)
Q Consensus 215 ~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (424)
......|+.||++.+.+++.++.++ |+++++|+||.+-.+....-.-.......+....+.
T Consensus 159 ----------~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~------ 222 (260)
T PRK08416 159 ----------IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL------ 222 (260)
T ss_pred ----------CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC------
Confidence 1234679999999999999999875 899999999998765211000001111111111111
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.-+...+|+|.+++.++...... ..|+.+.+.+|.
T Consensus 223 ------~r~~~p~~va~~~~~l~~~~~~~----------~~G~~i~vdgg~ 257 (260)
T PRK08416 223 ------NRMGQPEDLAGACLFLCSEKASW----------LTGQTIVVDGGT 257 (260)
T ss_pred ------CCCCCHHHHHHHHHHHcChhhhc----------ccCcEEEEcCCe
Confidence 12667899999999988654332 334778776653
No 160
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.88 E-value=7.2e-21 Score=176.67 Aligned_cols=229 Identities=15% Similarity=0.107 Sum_probs=161.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++++
T Consensus 4 ~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~~~ 80 (253)
T PRK06172 4 TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIRE---AGGEALFVACDVTRDAEVKALVEQTIA 80 (253)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999976543332222211 2346899999999999998888765
Q ss_pred ---CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||..... ...++.+..+++|+.++.++++++ .+.+. .++|++||...+...
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~ii~~sS~~~~~~~-------- 151 (253)
T PRK06172 81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGG-GAIVNTASVAGLGAA-------- 151 (253)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEECchhhccCC--------
Confidence 679999999974321 123344678999999987766544 33443 389999998776531
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC-cHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM-AYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.....|+.+|.+.+.+++.++.++ |+++++|+||.|-.+...... ........+....+ .
T Consensus 152 ----~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------------~ 215 (253)
T PRK06172 152 ----PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP------------V 215 (253)
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC------------C
Confidence 345789999999999999998775 799999999999776422100 00111111111111 1
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.-+...+|+++.++.++...... ..|+.+.+.+|.
T Consensus 216 ~~~~~p~~ia~~~~~l~~~~~~~----------~~G~~i~~dgg~ 250 (253)
T PRK06172 216 GRIGKVEEVASAVLYLCSDGASF----------TTGHALMVDGGA 250 (253)
T ss_pred CCccCHHHHHHHHHHHhCccccC----------cCCcEEEECCCc
Confidence 12567899999999988765322 344788887764
No 161
>PRK08324 short chain dehydrogenase; Validated
Probab=99.88 E-value=2.5e-21 Score=203.52 Aligned_cols=241 Identities=16% Similarity=0.137 Sum_probs=168.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
...+.+|+|+||||+|+||.++++.|+++|++|++++|+.+.......... ...++.++.+|++|.+++.++++..
T Consensus 417 ~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~----~~~~v~~v~~Dvtd~~~v~~~~~~~ 492 (681)
T PRK08324 417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELG----GPDRALGVACDVTDEAAVQAAFEEA 492 (681)
T ss_pred CcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHh----ccCcEEEEEecCCCHHHHHHHHHHH
Confidence 344678999999999999999999999999999999997643322221111 1147889999999999998888754
Q ss_pred -----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... ...+.+..+++|+.|+.++++++. +.+...+||++||...+...
T Consensus 493 ~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~------- 565 (681)
T PRK08324 493 ALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG------- 565 (681)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-------
Confidence 6899999999754321 122345689999999998876664 44432489999997665321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEecccc-CCCCCCCCcHHHHHHHHHcCCcee----EEecCC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVY-GPWGRPDMAYFFFTRDIIRGKRIT----VYEAPD 292 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 292 (424)
.....|+.+|.+.+.+++.++.++ |+++++|+|+.|| +++....... .......+.... .+ .
T Consensus 566 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~--~~~~~~~g~~~~~~~~~~---~ 635 (681)
T PRK08324 566 -----PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWI--EARAAAYGLSEEELEEFY---R 635 (681)
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhh--hhhhhhccCChHHHHHHH---H
Confidence 345789999999999999998765 6999999999998 5432211110 011111111110 11 2
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
.+...+.+++++|+|++++.++...... ..|++|++.+|....
T Consensus 636 ~~~~l~~~v~~~DvA~a~~~l~s~~~~~----------~tG~~i~vdgG~~~~ 678 (681)
T PRK08324 636 ARNLLKREVTPEDVAEAVVFLASGLLSK----------TTGAIITVDGGNAAA 678 (681)
T ss_pred hcCCcCCccCHHHHHHHHHHHhCccccC----------CcCCEEEECCCchhc
Confidence 3445667999999999999987532211 344899999886543
No 162
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.88 E-value=1.6e-21 Score=187.61 Aligned_cols=187 Identities=19% Similarity=0.147 Sum_probs=136.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
...+|+++||||+|+||.++++.|+++|++|++++|+.+.......... .....+.++.+|++|.++++++++..
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 79 (322)
T PRK07453 3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELG---IPPDSYTIIHIDLGDLDSVRRFVDDFRA 79 (322)
T ss_pred CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh---ccCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3568899999999999999999999999999999997654333222221 12346889999999999999888763
Q ss_pred ---CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHHh----cCC-CCeEEEecCCcccCCCC--C--C
Q 042406 154 ---AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCKS----SDP-QPAIVWASSSSVYGVNK--K--V 216 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~-~~~~v~~SS~~vyg~~~--~--~ 216 (424)
++|+||||||+.... ...++.+..+++|+.|+.++++++.. .+. ..+||++||...+.... . .
T Consensus 80 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~ 159 (322)
T PRK07453 80 LGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPI 159 (322)
T ss_pred hCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCC
Confidence 479999999975321 12334577899999999888777654 322 13899999976643110 0 0
Q ss_pred --CCCC-----------------CCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEEeccccCCC
Q 042406 217 --PFSE-----------------KDRTDQPASLYAATKKAGEAIAHAYNHIY----GLSITGLRFFTVYGPW 265 (424)
Q Consensus 217 --~~~e-----------------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~i~~~~vrp~~v~G~~ 265 (424)
+.+. +..+..+...|+.||++.+.+++++++++ |++++++|||.|++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 160 PAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred CCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 0000 01123566889999999999999988765 7999999999998643
No 163
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.88 E-value=7.2e-21 Score=183.61 Aligned_cols=210 Identities=18% Similarity=0.146 Sum_probs=151.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++.+|++|.++++++++.+
T Consensus 5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~---~g~~~~~v~~Dv~d~~~v~~~~~~~~~ 81 (334)
T PRK07109 5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRA---AGGEALAVVADVADAEAVQAAADRAEE 81 (334)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH---cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 46788999999999999999999999999999999975543332222211 2346889999999999999887754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHH----HHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNL----LETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~l----l~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|++|||||...... ..++.+..+++|+.|+.++ ++.+++.+.+ +||++||...+...
T Consensus 82 ~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g-~iV~isS~~~~~~~--------- 151 (334)
T PRK07109 82 ELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRG-AIIQVGSALAYRSI--------- 151 (334)
T ss_pred HCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEeCChhhccCC---------
Confidence 6899999999753221 2223456889998886654 4555555443 89999998887531
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh-----CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY-----GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.....|+.+|++.+.+++.++.+. ++++++|+||.|.+|... . ........ ....
T Consensus 152 ---~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~------~-~~~~~~~~----------~~~~ 211 (334)
T PRK07109 152 ---PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFD------W-ARSRLPVE----------PQPV 211 (334)
T ss_pred ---CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhh------h-hhhhcccc----------ccCC
Confidence 335789999999999998887653 699999999999876221 0 11111100 0111
Q ss_pred cccccHHHHHHHHHHHhhhcc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~ 318 (424)
..+...+|+|++++.++.++.
T Consensus 212 ~~~~~pe~vA~~i~~~~~~~~ 232 (334)
T PRK07109 212 PPIYQPEVVADAILYAAEHPR 232 (334)
T ss_pred CCCCCHHHHHHHHHHHHhCCC
Confidence 236789999999999998763
No 164
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.88 E-value=1.2e-20 Score=174.24 Aligned_cols=225 Identities=14% Similarity=0.044 Sum_probs=158.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
|+++||||+|+||+++++.|+++|++|++++|+... ..............++.++.+|++|.+++.++++.+ +
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 80 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND--CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGP 80 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH--HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 589999999999999999999999999999997531 111111111112346899999999999998888764 5
Q ss_pred ccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|+|||+||..... ...++.+..+++|+.++.++++ .+++.+.+ +||++||...+... .
T Consensus 81 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~iss~~~~~~~------------~ 147 (245)
T PRK12824 81 VDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYG-RIINISSVNGLKGQ------------F 147 (245)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCe-EEEEECChhhccCC------------C
Confidence 89999999975421 1233446789999999888754 44555544 99999997766421 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
....|+.+|++.+.+++.++.+. ++++++++||.+.++....- .......+....+ ...+...
T Consensus 148 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~------------~~~~~~~ 213 (245)
T PRK12824 148 GQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQM--GPEVLQSIVNQIP------------MKRLGTP 213 (245)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc--CHHHHHHHHhcCC------------CCCCCCH
Confidence 34679999999999999987643 89999999999988743211 1122222222221 1225568
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+|+++++..++...... ..|+++++.+|..
T Consensus 214 ~~va~~~~~l~~~~~~~----------~~G~~~~~~~g~~ 243 (245)
T PRK12824 214 EEIAAAVAFLVSEAAGF----------ITGETISINGGLY 243 (245)
T ss_pred HHHHHHHHHHcCccccC----------ccCcEEEECCCee
Confidence 99999998887553221 3448999988753
No 165
>PRK12743 oxidoreductase; Provisional
Probab=99.88 E-value=1.2e-20 Score=175.53 Aligned_cols=225 Identities=12% Similarity=0.007 Sum_probs=156.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchh-hhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE-TSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
+|+++||||+|+||.+++++|+++|++|+++.+...... ....... ....++.++.+|++|.+++++++++.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVR---SHGVRAEIRQLDLSDLPEGAQALDKLIQRL 78 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH---hcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 578999999999999999999999999998876443221 1111111 12346889999999999988887754
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+.+|+.++.++++++... +..++||++||..... +
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~------------~ 146 (256)
T PRK12743 79 GRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHT------------P 146 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccC------------C
Confidence 5799999999754321 22334678999999999998877543 2224899999964321 1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
..+...|+.+|.+.+.+++.++.++ |++++.|+||.++++...... ...........+ . ..+.
T Consensus 147 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~--~----------~~~~ 212 (256)
T PRK12743 147 LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDD--SDVKPDSRPGIP--L----------GRPG 212 (256)
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccC--hHHHHHHHhcCC--C----------CCCC
Confidence 1456789999999999999988754 899999999999987432110 111111111111 1 1145
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+.+|++++++.++...... ..|.++.+.++.
T Consensus 213 ~~~dva~~~~~l~~~~~~~----------~~G~~~~~dgg~ 243 (256)
T PRK12743 213 DTHEIASLVAWLCSEGASY----------TTGQSLIVDGGF 243 (256)
T ss_pred CHHHHHHHHHHHhCccccC----------cCCcEEEECCCc
Confidence 7899999999887654321 344788887764
No 166
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.88 E-value=1.8e-20 Score=174.88 Aligned_cols=230 Identities=12% Similarity=0.057 Sum_probs=157.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhh-hHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET-SLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.+++|+++||||+|+||.++++.|+++|++|+++.|+...... ....... ...++.++.+|++|.+++.++++..
T Consensus 4 ~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~i~~~~~~~~ 80 (261)
T PRK08936 4 DLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKK---AGGEAIAVKGDVTVESDVVNLIQTAV 80 (261)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH---cCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 3678999999999999999999999999999998885432111 1111111 1346788999999999998887754
Q ss_pred ----CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHH----HHHHHhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNL----LETCKSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~l----l~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||....... .++.+..+++|+.++.++ ++.+++.+...++|++||...+.
T Consensus 81 ~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~---------- 150 (261)
T PRK08936 81 KEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQI---------- 150 (261)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccC----------
Confidence 67999999997543221 233456899999887655 44555555444899999965432
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
+..+...|+.+|++.+.+.+.++.++ |+++++|+||.+.++........+.....+....+ ..
T Consensus 151 --~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~ 216 (261)
T PRK08936 151 --PWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIP------------MG 216 (261)
T ss_pred --CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCC------------CC
Confidence 11445789999999999999987664 89999999999988743221111111122222111 11
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+...+|++++++.++...... ..|..+.+.++.
T Consensus 217 ~~~~~~~va~~~~~l~s~~~~~----------~~G~~i~~d~g~ 250 (261)
T PRK08936 217 YIGKPEEIAAVAAWLASSEASY----------VTGITLFADGGM 250 (261)
T ss_pred CCcCHHHHHHHHHHHcCcccCC----------ccCcEEEECCCc
Confidence 2667899999999988764432 333666666553
No 167
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.2e-20 Score=176.00 Aligned_cols=230 Identities=13% Similarity=0.081 Sum_probs=162.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDG-VLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.+++|+++||||+|+||..++++|+++|++ |++++|+.+.......... .....+.++.+|++|.+++.++++..
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELE---ALGAKAVFVQADLSDVEDCRRVVAAAD 79 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHH---hcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 467899999999999999999999999998 9999996543322111111 12346788999999999999888764
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.+ .+...++|++||...++..
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-------- 151 (260)
T PRK06198 80 EAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-------- 151 (260)
T ss_pred HHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC--------
Confidence 5799999999754221 1222356899999999998877744 2222489999998877532
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC--C---CcHHHHHHHHHcCCceeEEecCCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP--D---MAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
.....|+.+|.+.|.+++.++.++ +++++.++||.++++.... . .....+........
T Consensus 152 ----~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------- 217 (260)
T PRK06198 152 ----PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQ---------- 217 (260)
T ss_pred ----CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccC----------
Confidence 235789999999999999988765 6999999999999885321 0 00111222221111
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
....+++.+|++++++.++...... ..|+++.+.++.
T Consensus 218 --~~~~~~~~~~~a~~~~~l~~~~~~~----------~~G~~~~~~~~~ 254 (260)
T PRK06198 218 --PFGRLLDPDEVARAVAFLLSDESGL----------MTGSVIDFDQSV 254 (260)
T ss_pred --CccCCcCHHHHHHHHHHHcChhhCC----------ccCceEeECCcc
Confidence 1223678999999999988654321 344788887654
No 168
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.88 E-value=1.3e-20 Score=172.88 Aligned_cols=215 Identities=15% Similarity=0.129 Sum_probs=153.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
.+|+++||||+|+||.+++++|+++|++|++++|+... . ....++.+|++|.+++.++++..
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~----------~----~~~~~~~~D~~~~~~~~~~~~~~~~~~ 67 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID----------D----FPGELFACDLADIEQTAATLAQINEIH 67 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc----------c----cCceEEEeeCCCHHHHHHHHHHHHHhC
Confidence 46899999999999999999999999999999996532 0 11257899999999888777643
Q ss_pred CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||...... ..++.+..+++|+.++.++.+++ ++.+.+ +||++||.+.|+.
T Consensus 68 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~~~~------------- 133 (234)
T PRK07577 68 PVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQG-RIVNICSRAIFGA------------- 133 (234)
T ss_pred CCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEEccccccCC-------------
Confidence 6799999999865422 12334568999999987775554 445554 8999999877653
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC-cHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM-AYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.....|+.+|.+.+.+++.++.++ |+++++||||.+.++...... ........+....+. ....
T Consensus 134 ~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 201 (234)
T PRK07577 134 LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM------------RRLG 201 (234)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC------------CCCc
Confidence 234789999999999999887654 899999999999887432100 001111122221111 1144
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+|+|++++.++..+... ..|+.+.+.++.
T Consensus 202 ~~~~~a~~~~~l~~~~~~~----------~~g~~~~~~g~~ 232 (234)
T PRK07577 202 TPEEVAAAIAFLLSDDAGF----------ITGQVLGVDGGG 232 (234)
T ss_pred CHHHHHHHHHHHhCcccCC----------ccceEEEecCCc
Confidence 6899999999998765321 234788887654
No 169
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.88 E-value=1.5e-20 Score=175.84 Aligned_cols=228 Identities=15% Similarity=0.123 Sum_probs=160.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||.+++++|+++|++|++++|+.+........... ...++.++++|++|.+++++++++.
T Consensus 7 ~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 83 (265)
T PRK07097 7 SLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRE---LGIEAHGYVCDVTDEDGVQAMVSQIEK 83 (265)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999876544332222211 1246889999999999999988764
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCc-ccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSS-VYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~-vyg~~~~~~~~e~ 221 (424)
++|+||||||..... ...++.+..+++|+.++..+++++. +.+. .+||++||.. .++.
T Consensus 84 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------- 153 (265)
T PRK07097 84 EVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGH-GKIINICSMMSELGR--------- 153 (265)
T ss_pred hCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCC-cEEEEEcCccccCCC---------
Confidence 579999999986532 2223346789999999887766654 3443 3899999853 3331
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC------cHHHHHHHHHcCCceeEEecCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM------AYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
.+...|+.+|.+.+.+++.+++++ |++++.|+||.+.++...... ....+...+....+
T Consensus 154 ----~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 221 (265)
T PRK07097 154 ----ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP-------- 221 (265)
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC--------
Confidence 345789999999999999998875 899999999999887432100 00001111111111
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+...+|+|.+++.++...... ..|+.+.+.++.
T Consensus 222 ----~~~~~~~~dva~~~~~l~~~~~~~----------~~g~~~~~~gg~ 257 (265)
T PRK07097 222 ----AARWGDPEDLAGPAVFLASDASNF----------VNGHILYVDGGI 257 (265)
T ss_pred ----ccCCcCHHHHHHHHHHHhCcccCC----------CCCCEEEECCCc
Confidence 112567899999999998764321 334677777664
No 170
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=1.2e-20 Score=175.12 Aligned_cols=226 Identities=12% Similarity=0.046 Sum_probs=156.3
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++|+++||||+ ++||+.++++|+++|++|++.+|+. +..... .......+.++++|++|.++++++++.+
T Consensus 4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~-----~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 77 (252)
T PRK06079 4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSL-----QKLVDEEDLLVECDVASDESIERAFATI 77 (252)
T ss_pred ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHH-----HhhccCceeEEeCCCCCHHHHHHHHHHH
Confidence 3678999999999 7999999999999999999999862 211111 1112246789999999999998887654
Q ss_pred -----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||.... ....++.+..+++|+.++..+++++.... ...++|++||.+....
T Consensus 78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~------- 150 (252)
T PRK06079 78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERA------- 150 (252)
T ss_pred HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcccc-------
Confidence 58999999997532 11222346789999999888877765432 1238999998654321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
......|++||++.+.+++.++.++ |+++++|.||.|-.+..........+...+....+ .
T Consensus 151 -----~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~--------- 214 (252)
T PRK06079 151 -----IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTV--D--------- 214 (252)
T ss_pred -----CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCc--c---------
Confidence 1234689999999999999998764 89999999999987632110001122222222111 1
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
.-+...+|+|.+++.++...... ..|+++.+.+|
T Consensus 215 -~r~~~pedva~~~~~l~s~~~~~----------itG~~i~vdgg 248 (252)
T PRK06079 215 -GVGVTIEEVGNTAAFLLSDLSTG----------VTGDIIYVDKG 248 (252)
T ss_pred -cCCCCHHHHHHHHHHHhCccccc----------ccccEEEeCCc
Confidence 12677899999999988664322 33477777665
No 171
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.88 E-value=8.4e-21 Score=178.31 Aligned_cols=199 Identities=16% Similarity=0.078 Sum_probs=147.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||++++++|+++|++|++.+|+.+....... . . ..+.++.+|++|++++.++++.+
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~-~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 75 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAA----E-L--GLVVGGPLDVTDPASFAAFLDAVEAD 75 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----H-h--ccceEEEccCCCHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999986543222111 1 1 25789999999999988877764
Q ss_pred --CccEEEEcccccCchhhc----cChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRYAM----QNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~~~----~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||........ ++.+..+++|+.|+.++++++ ++.+.+ +||++||.+.+...
T Consensus 76 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~---------- 144 (273)
T PRK07825 76 LGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRG-HVVNVASLAGKIPV---------- 144 (273)
T ss_pred cCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-EEEEEcCccccCCC----------
Confidence 579999999986432222 223568999999987766654 445544 89999997665321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.....|+.||.+.+.+.+.+..+. |+++++|+||.+.++... +.. ......+
T Consensus 145 --~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~--------------~~~---------~~~~~~~ 199 (273)
T PRK07825 145 --PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIA--------------GTG---------GAKGFKN 199 (273)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhc--------------ccc---------cccCCCC
Confidence 345789999999999888887654 899999999988654211 000 0111247
Q ss_pred ccHHHHHHHHHHHhhhcc
Q 042406 301 TYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~ 318 (424)
+.++|+|++++.++.++.
T Consensus 200 ~~~~~va~~~~~~l~~~~ 217 (273)
T PRK07825 200 VEPEDVAAAIVGTVAKPR 217 (273)
T ss_pred CCHHHHHHHHHHHHhCCC
Confidence 889999999999998754
No 172
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.88 E-value=1.1e-20 Score=174.71 Aligned_cols=226 Identities=15% Similarity=0.109 Sum_probs=152.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-eCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
+++++||||+|+||++++++|+++|++|+++ .|+.+...+...... ....++.++.+|++|.+++.++++++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~ 77 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLIT---QAGGKAFVLQADISDENQVVAMFTAIDQHD 77 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH---hCCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 3679999999999999999999999999875 454322221111111 11345788999999999999988865
Q ss_pred -CccEEEEcccccCchh-----hccChHHHHHHHHHHHHHHHHHHHhc------CCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY-----AMQNPNSYVESNIAGFVNLLETCKSS------DPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~-----~~~~~~~~~~~N~~g~~~ll~a~~~~------~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ...+.+..+++|+.++.++++++... +...+||++||...+...
T Consensus 78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~-------- 149 (247)
T PRK09730 78 EPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA-------- 149 (247)
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC--------
Confidence 5799999999753211 12233578999999998777665432 112379999997554321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
+ .....|+.+|.+.+.+++.++.++ +++++++|||.+|+|....... +.....+....+...
T Consensus 150 --~-~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------- 214 (247)
T PRK09730 150 --P-GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGE-PGRVDRVKSNIPMQR----------- 214 (247)
T ss_pred --C-CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCC-HHHHHHHHhcCCCCC-----------
Confidence 0 122469999999999999887654 8999999999999985432221 122223332222111
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
..+++|++++++.++...... ..|..|.+.++
T Consensus 215 -~~~~~dva~~~~~~~~~~~~~----------~~g~~~~~~g~ 246 (247)
T PRK09730 215 -GGQPEEVAQAIVWLLSDKASY----------VTGSFIDLAGG 246 (247)
T ss_pred -CcCHHHHHHHHHhhcChhhcC----------ccCcEEecCCC
Confidence 236899999999888654321 23367777664
No 173
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.88 E-value=7.3e-21 Score=174.00 Aligned_cols=221 Identities=15% Similarity=0.096 Sum_probs=157.7
Q ss_pred EEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-CccEEEEc
Q 042406 83 LVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-AFTHVMHL 161 (424)
Q Consensus 83 lItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~~d~vi~~ 161 (424)
+||||+|+||++++++|+++|++|++++|+.+......... ....+++++.+|++|.+++.++++.. ++|+|||+
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARAL----GGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----hcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEEC
Confidence 69999999999999999999999999999654322211111 11356889999999999999999875 46999999
Q ss_pred ccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 042406 162 AAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 162 Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
||...... ..++.+..+++|+.++.+++++....+. ++||++||.+.+... .+.+.|+.+|.+
T Consensus 77 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-g~iv~~ss~~~~~~~------------~~~~~Y~~sK~a 143 (230)
T PRK07041 77 AADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPG-GSLTFVSGFAAVRPS------------ASGVLQGAINAA 143 (230)
T ss_pred CCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCC-eEEEEECchhhcCCC------------CcchHHHHHHHH
Confidence 99754321 2234567899999999999996655444 499999998877531 445789999999
Q ss_pred HHHHHHHHHHHh-CCcEEEEEeccccCCCCCC--CCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHh
Q 042406 238 GEAIAHAYNHIY-GLSITGLRFFTVYGPWGRP--DMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGL 314 (424)
Q Consensus 238 ~e~~~~~~~~~~-~i~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 314 (424)
.+.+++.++.+. ++++++++||.+-++.... ......+........+ . ..+...+|+|++++.++
T Consensus 144 ~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~--~----------~~~~~~~dva~~~~~l~ 211 (230)
T PRK07041 144 LEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLP--A----------RRVGQPEDVANAILFLA 211 (230)
T ss_pred HHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCC--C----------CCCcCHHHHHHHHHHHh
Confidence 999999998765 7899999999987653210 0000112222222111 1 11456799999999988
Q ss_pred hhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 315 DTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
.... ..|++|++.+|.++
T Consensus 212 ~~~~------------~~G~~~~v~gg~~~ 229 (230)
T PRK07041 212 ANGF------------TTGSTVLVDGGHAI 229 (230)
T ss_pred cCCC------------cCCcEEEeCCCeec
Confidence 7432 23489999887643
No 174
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.88 E-value=4.7e-21 Score=178.43 Aligned_cols=199 Identities=16% Similarity=0.116 Sum_probs=145.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+|+||||+|+||+++++.|+++|++|++++|+.+....... ......++.++.+|++|.+++.+++++.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 77 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAA----RLPKAARVSVYAADVRDADALAAAAADFIAAHG 77 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999999997543222111 1111127899999999999998887764
Q ss_pred CccEEEEcccccCchh-----hccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY-----AMQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~-----~~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
.+|+||||||...... ..++.+..+++|+.|+.++++ ++++.+.+ +||++||...+...
T Consensus 78 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~-~iv~isS~~~~~~~----------- 145 (257)
T PRK07024 78 LPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRG-TLVGIASVAGVRGL----------- 145 (257)
T ss_pred CCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCC-EEEEEechhhcCCC-----------
Confidence 4799999999754321 123346789999999888766 55555544 89999986554211
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.....|++||++.+.+++.++.+ .|++++++|||.+.++..... . +. .+ .++
T Consensus 146 -~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--------------~---~~---~~----~~~ 200 (257)
T PRK07024 146 -PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN--------------P---YP---MP----FLM 200 (257)
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC--------------C---CC---CC----Ccc
Confidence 23467999999999999998754 489999999999988732110 0 00 00 135
Q ss_pred cHHHHHHHHHHHhhhcc
Q 042406 302 YIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~ 318 (424)
..+|+++.++.++.+..
T Consensus 201 ~~~~~a~~~~~~l~~~~ 217 (257)
T PRK07024 201 DADRFAARAARAIARGR 217 (257)
T ss_pred CHHHHHHHHHHHHhCCC
Confidence 78999999999987643
No 175
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.88 E-value=4.8e-21 Score=183.37 Aligned_cols=189 Identities=13% Similarity=0.041 Sum_probs=141.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
..++++|+++||||+++||.+++++|+++|++|++++|+.++.+........ .....++.++.+|++|.++++++++.+
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~-~~~~~~v~~~~~Dl~d~~sv~~~~~~~ 87 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRT-AVPDAKLSLRALDLSSLASVAALGEQL 87 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hCCCCceEEEEecCCCHHHHHHHHHHH
Confidence 4457899999999999999999999999999999999987655444333322 122346889999999999999888764
Q ss_pred -----CccEEEEcccccCch---hhccChHHHHHHHHHHHHHHHHHHHh---cCCCCeEEEecCCccc-CCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR---YAMQNPNSYVESNIAGFVNLLETCKS---SDPQPAIVWASSSSVY-GVNKKVPFSEK 221 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~---~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~~~~~v~~SS~~vy-g~~~~~~~~e~ 221 (424)
++|+||||||..... ...+..+..+++|+.|+..+.+.+.. .+. .+||++||...+ +.....++.++
T Consensus 88 ~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~-~riv~vsS~~~~~~~~~~~~~~~~ 166 (313)
T PRK05854 88 RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGR-ARVTSQSSIAARRGAINWDDLNWE 166 (313)
T ss_pred HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCC-CCeEEEechhhcCCCcCccccccc
Confidence 579999999986532 23355678999999998777665542 222 389999987554 32222233333
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH-----hCCcEEEEEeccccCCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI-----YGLSITGLRFFTVYGPW 265 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~i~~~~vrp~~v~G~~ 265 (424)
.. ..+...|+.||++.+.++++++++ .|+++++++||.|..+-
T Consensus 167 ~~-~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~ 214 (313)
T PRK05854 167 RS-YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNL 214 (313)
T ss_pred cc-CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCc
Confidence 32 255678999999999999999864 37999999999997653
No 176
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.88 E-value=1.7e-20 Score=175.85 Aligned_cols=228 Identities=15% Similarity=0.110 Sum_probs=154.6
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 77 TRGLTVLVTGAAG--FVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+++|++|||||++ +||++++++|+++|++|++.+|+.... ....+.... . ....++++|++|.++++++++.+
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~-~~~~~~~~~-~--g~~~~~~~Dv~d~~~v~~~~~~~~ 80 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALG-KRVKPLAES-L--GSDFVLPCDVEDIASVDAVFEALE 80 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHH-HHHHHHHHh-c--CCceEEeCCCCCHHHHHHHHHHHH
Confidence 5789999999997 999999999999999999999864211 111111111 1 12357899999999999888765
Q ss_pred ----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||.... ....++.+..+++|+.++.++++++..... ..+||++||.+....
T Consensus 81 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~-------- 152 (271)
T PRK06505 81 KKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRV-------- 152 (271)
T ss_pred HHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcccc--------
Confidence 68999999997532 112233467899999998888776654321 238999998654321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
......|++||++.+.+++.++.++ |+++++|.||.|..+....-.............. ++
T Consensus 153 ----~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~--p~---------- 216 (271)
T PRK06505 153 ----MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNS--PL---------- 216 (271)
T ss_pred ----CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcC--Cc----------
Confidence 1234679999999999999998875 8999999999998763211000001111111111 11
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.-+...+|+|.+++.++...... ..|+++.+.+|.
T Consensus 217 ~r~~~peeva~~~~fL~s~~~~~----------itG~~i~vdgG~ 251 (271)
T PRK06505 217 RRTVTIDEVGGSALYLLSDLSSG----------VTGEIHFVDSGY 251 (271)
T ss_pred cccCCHHHHHHHHHHHhCccccc----------cCceEEeecCCc
Confidence 11556899999999988754322 334778777664
No 177
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.87 E-value=1.6e-20 Score=174.35 Aligned_cols=227 Identities=11% Similarity=0.099 Sum_probs=158.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+.+|+++||||+|+||++++++|+++|++|+++++... ........ . ....+.++++|++|.+++.++++++
T Consensus 7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~--~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVT--A-LGRRFLSLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHH--h-cCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999887432 11111111 1 1346789999999999999988764
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.. .+...++|++||...+...
T Consensus 82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 152 (253)
T PRK08993 82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG--------- 152 (253)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC---------
Confidence 6899999999754321 2234567999999999888877643 2222489999998776531
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.....|+.+|++.+.+++.++.++ |++++.|+||.+-.+....-.........+... ++. .-
T Consensus 153 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~--~p~----------~r 217 (253)
T PRK08993 153 ---IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDR--IPA----------GR 217 (253)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhc--CCC----------CC
Confidence 234689999999999999998764 899999999999876322100000111112111 111 12
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
+...+|+|.+++.++...... ..|+.+.+.+|
T Consensus 218 ~~~p~eva~~~~~l~s~~~~~----------~~G~~~~~dgg 249 (253)
T PRK08993 218 WGLPSDLMGPVVFLASSASDY----------INGYTIAVDGG 249 (253)
T ss_pred CcCHHHHHHHHHHHhCccccC----------ccCcEEEECCC
Confidence 667899999999988765432 33467776654
No 178
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.3e-20 Score=181.10 Aligned_cols=211 Identities=15% Similarity=0.174 Sum_probs=153.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+.+.+|+|+||||+|+||++++++|+++|++|++++|+.+..+........ ....+.++.+|++|.++++++++.+
T Consensus 3 ~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~---~g~~~~~~~~Dv~d~~~v~~~~~~~~ 79 (330)
T PRK06139 3 GPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRA---LGAEVLVVPTDVTDADQVKALATQAA 79 (330)
T ss_pred cCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999976544333222221 2346788999999999999888653
Q ss_pred ----CccEEEEcccccCchhhc----cChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRYAM----QNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~~~----~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|++|||||........ ++.+..+++|+.|+.++.+++ ++.+.+ +||++||...+...
T Consensus 80 ~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g-~iV~isS~~~~~~~-------- 150 (330)
T PRK06139 80 SFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHG-IFINMISLGGFAAQ-------- 150 (330)
T ss_pred HhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCC-EEEEEcChhhcCCC--------
Confidence 679999999975432222 223568999999988876665 444433 89999997765421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY----GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.....|+.||++.+.+++.++.+. ++++++|+||.+.+|...... .. .+... ...
T Consensus 151 ----p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~-------~~-~~~~~---------~~~ 209 (330)
T PRK06139 151 ----PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA-------NY-TGRRL---------TPP 209 (330)
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc-------cc-ccccc---------cCC
Confidence 234789999999999988887663 799999999999988432110 00 01000 111
Q ss_pred cccccHHHHHHHHHHHhhhcc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~ 318 (424)
...++.+|+|++++.+++++.
T Consensus 210 ~~~~~pe~vA~~il~~~~~~~ 230 (330)
T PRK06139 210 PPVYDPRRVAKAVVRLADRPR 230 (330)
T ss_pred CCCCCHHHHHHHHHHHHhCCC
Confidence 236789999999999998765
No 179
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3e-21 Score=181.02 Aligned_cols=165 Identities=18% Similarity=0.247 Sum_probs=131.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
++++|+||||+|+||++++++|+++|++|++++|+.+... ...+++++++|++|.++++++++.+
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 71 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAA-----------PIPGVELLELDVTDDASVQAAVDEVIARA 71 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-----------ccCCCeeEEeecCCHHHHHHHHHHHHHhC
Confidence 4678999999999999999999999999999999643211 1246889999999999999988865
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 72 g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~-~iv~isS~~~~~~~----------- 139 (270)
T PRK06179 72 GRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSG-RIINISSVLGFLPA----------- 139 (270)
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-eEEEECCccccCCC-----------
Confidence 5799999999854322 22334678999999988887774 555654 89999997665421
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCC
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWG 266 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~ 266 (424)
.....|+.+|.+.+.+++.++.+ .|+++++++||.+.++..
T Consensus 140 -~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 140 -PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 23478999999999999998765 499999999999988743
No 180
>PRK12742 oxidoreductase; Provisional
Probab=99.87 E-value=3.1e-20 Score=170.59 Aligned_cols=223 Identities=12% Similarity=0.042 Sum_probs=154.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-C
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-A 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~ 154 (424)
.+++|+|+||||+|+||++++++|+++|++|+++.+..... ...... ..++.++.+|++|.+++.++++.. +
T Consensus 3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (237)
T PRK12742 3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDA---AERLAQ----ETGATAVQTDSADRDAVIDVVRKSGA 75 (237)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHH---HHHHHH----HhCCeEEecCCCCHHHHHHHHHHhCC
Confidence 35789999999999999999999999999999887643211 111111 124678899999999998888764 4
Q ss_pred ccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSS-DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPAS 229 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~ 229 (424)
+|+||||||..... ...++.+..+++|+.++.+++..+... ....++|++||...... +..+..
T Consensus 76 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~-----------~~~~~~ 144 (237)
T PRK12742 76 LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRM-----------PVAGMA 144 (237)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccC-----------CCCCCc
Confidence 79999999975321 122345679999999998887665543 12248999999654210 113467
Q ss_pred hHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHH
Q 042406 230 LYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306 (424)
Q Consensus 230 ~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 306 (424)
.|+.+|++.+.+++.++.++ |+++++|+||.+..+...... .....+....+ ...+...+|+
T Consensus 145 ~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~------------~~~~~~p~~~ 209 (237)
T PRK12742 145 AYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG---PMKDMMHSFMA------------IKRHGRPEEV 209 (237)
T ss_pred chHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---HHHHHHHhcCC------------CCCCCCHHHH
Confidence 89999999999999988764 799999999999877432211 11111111111 1125678999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
++++..++...... ..|..+.+.+|
T Consensus 210 a~~~~~l~s~~~~~----------~~G~~~~~dgg 234 (237)
T PRK12742 210 AGMVAWLAGPEASF----------VTGAMHTIDGA 234 (237)
T ss_pred HHHHHHHcCcccCc----------ccCCEEEeCCC
Confidence 99999888654421 33477777655
No 181
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.9e-20 Score=173.82 Aligned_cols=232 Identities=13% Similarity=0.091 Sum_probs=158.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... .....++.++.+|++|.+++.++++.+
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLRE-KFPGARLLAARCDVLDEADVAAFAAAVEA 83 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHh-hCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999976554433322221 112246889999999999998887754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++....+++|+.+...+++++ ++.+.+ +||++||...+...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~--------- 153 (265)
T PRK07062 84 RFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAA-SIVCVNSLLALQPE--------- 153 (265)
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCc-EEEEeccccccCCC---------
Confidence 5799999999754221 12234568889988876665544 444433 89999997665321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC--------CcHHHHHHHHHcCCceeEEecC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD--------MAYFFFTRDIIRGKRITVYEAP 291 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 291 (424)
.....|+.+|++.+.+++.++.++ |+++++|+||.|..+..... ..+..+...+.....+++
T Consensus 154 ---~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---- 226 (265)
T PRK07062 154 ---PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL---- 226 (265)
T ss_pred ---CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc----
Confidence 234689999999999999888764 89999999999977632110 001111111111111111
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
.-+...+|+|.+++.++...... ..|+++.+.+|
T Consensus 227 ------~r~~~p~~va~~~~~L~s~~~~~----------~tG~~i~vdgg 260 (265)
T PRK07062 227 ------GRLGRPDEAARALFFLASPLSSY----------TTGSHIDVSGG 260 (265)
T ss_pred ------CCCCCHHHHHHHHHHHhCchhcc----------cccceEEEcCc
Confidence 12667899999999887654321 34478888765
No 182
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.87 E-value=8.4e-21 Score=175.75 Aligned_cols=207 Identities=13% Similarity=0.093 Sum_probs=145.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
|+|+||||+|+||.++++.|+++|++|++++|+.+..... ... ...++.++.+|++|.+++.++++.. +
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 74 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQEL----KDE--LGDNLYIAQLDVRNRAAIEEMLASLPAEWRN 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHH--hccceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 6899999999999999999999999999999965432211 111 1246889999999999998887753 5
Q ss_pred ccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 155 ~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
+|+|||+||.... ....++.+..+++|+.|+.++++. +++.+.+ +||++||.+.+.. .
T Consensus 75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~isS~~~~~~------------~ 141 (248)
T PRK10538 75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG-HIINIGSTAGSWP------------Y 141 (248)
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEECCcccCCC------------C
Confidence 7999999997421 112334467899999996655554 4455544 8999999765421 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.+...|+.+|.+.+.+++.++.+. ++++++|+||.+.|+......+.... .... ..+ . ...++.
T Consensus 142 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~-~~~~-----~~~----~---~~~~~~ 208 (248)
T PRK10538 142 AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDD-GKAE-----KTY----Q---NTVALT 208 (248)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcH-HHHH-----hhc----c---ccCCCC
Confidence 345789999999999999998764 79999999999987632110000000 0000 001 0 113578
Q ss_pred HHHHHHHHHHHhhhcc
Q 042406 303 IDDIVKGCLAGLDTAK 318 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~ 318 (424)
.+|+|++++.++..+.
T Consensus 209 ~~dvA~~~~~l~~~~~ 224 (248)
T PRK10538 209 PEDVSEAVWWVATLPA 224 (248)
T ss_pred HHHHHHHHHHHhcCCC
Confidence 9999999999887554
No 183
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.5e-20 Score=174.84 Aligned_cols=209 Identities=16% Similarity=0.075 Sum_probs=149.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
|+|+||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++.+ +
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 77 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLRE---AGGDGFYQRCDVRDYSQLTALAQACEEKWGG 77 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5799999999999999999999999999999975443332222211 2346889999999999998888743 5
Q ss_pred ccEEEEcccccCchhhc----cChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRYAM----QNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~----~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|+||||||........ .+.+..+++|+.++.++.++ +++.+.+ +||++||...+... .
T Consensus 78 id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~vsS~~~~~~~------------~ 144 (270)
T PRK05650 78 IDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSG-RIVNIASMAGLMQG------------P 144 (270)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC-EEEEECChhhcCCC------------C
Confidence 79999999986532222 22345789999887775554 5555544 89999997665421 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC-cHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM-AYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
....|+.+|++.+.+.+.++.++ |+++++|+||.+.++...... ..+.....+.. .....+++
T Consensus 145 ~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~ 211 (270)
T PRK05650 145 AMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGK-------------LLEKSPIT 211 (270)
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHH-------------HhhcCCCC
Confidence 45789999999999999988774 899999999999887432110 00111111100 00123678
Q ss_pred HHHHHHHHHHHhhhc
Q 042406 303 IDDIVKGCLAGLDTA 317 (424)
Q Consensus 303 v~Dva~a~~~~~~~~ 317 (424)
++|+|+.++.++++.
T Consensus 212 ~~~vA~~i~~~l~~~ 226 (270)
T PRK05650 212 AADIADYIYQQVAKG 226 (270)
T ss_pred HHHHHHHHHHHHhCC
Confidence 999999999999864
No 184
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.87 E-value=2.1e-20 Score=172.49 Aligned_cols=223 Identities=13% Similarity=0.048 Sum_probs=155.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++++++||||+|+||+++++.|+++|+.|++.+|+.+...... .. ...++.++.+|++|.+++.+++++.
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~----~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALA----AE--LGERVKIFPANLSDRDEVKALGQKAEA 76 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH----HH--hCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 456889999999999999999999999999988888543322211 11 1246889999999999998887653
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcc-cCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSV-YGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~v-yg~~~~~~~~e~ 221 (424)
++|+||||||..... ....+.+..+++|+.++.++++++.+ .+. ++||++||... ++.
T Consensus 77 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~~sS~~~~~~~--------- 146 (245)
T PRK12936 77 DLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRY-GRIINITSVVGVTGN--------- 146 (245)
T ss_pred HcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCC-CEEEEECCHHhCcCC---------
Confidence 579999999975421 12234567899999998888877643 343 38999999644 432
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.....|+.+|.+.+.+++.++++. ++++++++||.+.++..... .......+... . ...
T Consensus 147 ----~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~--~----------~~~ 208 (245)
T PRK12936 147 ----PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL--NDKQKEAIMGA--I----------PMK 208 (245)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc--ChHHHHHHhcC--C----------CCC
Confidence 234679999999999988887653 89999999998876532210 01111111111 1 112
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+...+|++++++.++...... ..|+++++.+|.
T Consensus 209 ~~~~~~~ia~~~~~l~~~~~~~----------~~G~~~~~~~g~ 242 (245)
T PRK12936 209 RMGTGAEVASAVAYLASSEAAY----------VTGQTIHVNGGM 242 (245)
T ss_pred CCcCHHHHHHHHHHHcCccccC----------cCCCEEEECCCc
Confidence 2567899999998887553321 345899988764
No 185
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.87 E-value=1.1e-20 Score=179.71 Aligned_cols=218 Identities=18% Similarity=0.155 Sum_probs=153.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|+++||||+|+||.++++.|+++|++|++++|+.+..+..... ......+..+.+|++|.+++.++++++
T Consensus 5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~----l~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (296)
T PRK05872 5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAE----LGGDDRVLTVVADVTDLAAMQAAAEEAV 80 (296)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH----hcCCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999965433222111 111345677789999999998887754
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD--PQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.... ...+||++||...+...
T Consensus 81 ~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 150 (296)
T PRK05872 81 ERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA---------- 150 (296)
T ss_pred HHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC----------
Confidence 6899999999854321 122335789999999999888775421 12389999997766431
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.....|+.||.+.+.+++.++.+ .|+++++++||.+.++..............+....+.++ ..+
T Consensus 151 --~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~----------~~~ 218 (296)
T PRK05872 151 --PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPL----------RRT 218 (296)
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcc----------cCC
Confidence 33578999999999999998765 489999999999987643211000011112221111111 136
Q ss_pred ccHHHHHHHHHHHhhhcc
Q 042406 301 TYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~ 318 (424)
+..+|++++++.++....
T Consensus 219 ~~~~~va~~i~~~~~~~~ 236 (296)
T PRK05872 219 TSVEKCAAAFVDGIERRA 236 (296)
T ss_pred CCHHHHHHHHHHHHhcCC
Confidence 789999999999987654
No 186
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=2.3e-20 Score=174.05 Aligned_cols=229 Identities=14% Similarity=0.093 Sum_probs=154.2
Q ss_pred CCCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAG--FVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++|+++||||++ +||+++++.|+++|++|++.+|+. ...+.......+ . ....++++|++|+++++++++.+
T Consensus 5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~-~--g~~~~~~~Dv~~~~~v~~~~~~~ 80 (260)
T PRK06603 5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEE-I--GCNFVSELDVTNPKSISNLFDDI 80 (260)
T ss_pred ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHh-c--CCceEEEccCCCHHHHHHHHHHH
Confidence 35789999999997 899999999999999999988853 222222222111 1 12346799999999999888754
Q ss_pred -----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||.... ....++.+..+++|+.+...+++++.... ...+||++||.+....
T Consensus 81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~------- 153 (260)
T PRK06603 81 KEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKV------- 153 (260)
T ss_pred HHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccC-------
Confidence 58999999997431 11122345689999999888887654321 1238999998654321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
......|++||++.+.+++.++.++ |+++++|.||.|-.+..............+....+ +
T Consensus 154 -----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~--------- 217 (260)
T PRK06603 154 -----IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAP--L--------- 217 (260)
T ss_pred -----CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCC--c---------
Confidence 1234679999999999999998764 79999999999976632100000111122221111 1
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.-+...+|+|.+++.++...... ..|+++.+.+|-
T Consensus 218 -~r~~~pedva~~~~~L~s~~~~~----------itG~~i~vdgG~ 252 (260)
T PRK06603 218 -KRNTTQEDVGGAAVYLFSELSKG----------VTGEIHYVDCGY 252 (260)
T ss_pred -CCCCCHHHHHHHHHHHhCccccc----------CcceEEEeCCcc
Confidence 12567899999999998754432 344777777653
No 187
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.87 E-value=3.9e-20 Score=170.96 Aligned_cols=225 Identities=13% Similarity=0.053 Sum_probs=153.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc-hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+++|+++||||+|+||++++++|+++|++|+++.+.... ......... .....+.++.+|++|.+++.++++++
T Consensus 1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 77 (246)
T PRK12938 1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQK---ALGFDFIASEGNVGDWDSTKAAFDKVKA 77 (246)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 357899999999999999999999999999886543221 111111111 11345778899999999998887754
Q ss_pred ---CccEEEEcccccCc----hhhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV----RYAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||.... ....++.+..+++|+.++..+++++ ++.+.+ +||++||......
T Consensus 78 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~isS~~~~~~---------- 146 (246)
T PRK12938 78 EVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWG-RIINISSVNGQKG---------- 146 (246)
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCe-EEEEEechhccCC----------
Confidence 57999999997542 1223345678999999977655544 444444 8999998644321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
......|+.+|.+.+.+++.++++ .|+++++|+||.+.+|.... ..+.....+....+ ...
T Consensus 147 --~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~--~~~~~~~~~~~~~~------------~~~ 210 (246)
T PRK12938 147 --QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA--IRPDVLEKIVATIP------------VRR 210 (246)
T ss_pred --CCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhh--cChHHHHHHHhcCC------------ccC
Confidence 134578999999999999888765 38999999999998874321 11222233322211 112
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
+...+|++.+++.++...... ..++.+.+.++
T Consensus 211 ~~~~~~v~~~~~~l~~~~~~~----------~~g~~~~~~~g 242 (246)
T PRK12938 211 LGSPDEIGSIVAWLASEESGF----------STGADFSLNGG 242 (246)
T ss_pred CcCHHHHHHHHHHHcCcccCC----------ccCcEEEECCc
Confidence 556899999999887654321 34478888765
No 188
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.87 E-value=3e-20 Score=170.76 Aligned_cols=220 Identities=13% Similarity=0.125 Sum_probs=154.8
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----Ccc
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----AFT 156 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~~d 156 (424)
|+|||++|+||.++++.|+++|++|++++|+............ . .....+.++.+|++|.++++++++++ ++|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEEL-K-AYGVKALGVVCDVSDREDVKAVVEEIEEELGPID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-H-hcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999986522111111111 1 11235889999999999999888764 579
Q ss_pred EEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCC-cccCCCCCCCCCCCCCCCCC
Q 042406 157 HVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSS-SVYGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 157 ~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~-~vyg~~~~~~~~e~~~~~~~ 227 (424)
+|||+||..... ....+.+..+++|+.++.++++++.. .+. ++||++||. +++|. .+
T Consensus 79 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~v~~sS~~~~~g~-------------~~ 144 (239)
T TIGR01830 79 ILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRS-GRIINISSVVGLMGN-------------AG 144 (239)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-eEEEEECCccccCCC-------------CC
Confidence 999999985421 22334567899999999999998865 333 389999995 45542 23
Q ss_pred CChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHH
Q 042406 228 ASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYID 304 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 304 (424)
...|+.+|.+.+.+++.++++ .|+++++++||.+.++.... ....+...+....+. ..+.+++
T Consensus 145 ~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~--~~~~~~~~~~~~~~~------------~~~~~~~ 210 (239)
T TIGR01830 145 QANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK--LSEKVKKKILSQIPL------------GRFGTPE 210 (239)
T ss_pred CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh--cChHHHHHHHhcCCc------------CCCcCHH
Confidence 578999999999999888765 38999999999987753221 111222223222111 1266899
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 305 Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
|++++++.++...... ..+++||+.++
T Consensus 211 ~~a~~~~~~~~~~~~~----------~~g~~~~~~~g 237 (239)
T TIGR01830 211 EVANAVAFLASDEASY----------ITGQVIHVDGG 237 (239)
T ss_pred HHHHHHHHHhCcccCC----------cCCCEEEeCCC
Confidence 9999999888543221 33489999764
No 189
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=3.2e-20 Score=173.03 Aligned_cols=228 Identities=13% Similarity=0.099 Sum_probs=153.7
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 77 TRGLTVLVTGAAG--FVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+++|+++||||++ +||+++++.|+++|++|++.+|+. ...+........ ...+.++.+|++|.++++++++.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~ 79 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ---LGSDIVLPCDVAEDASIDAMFAELG 79 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhc---cCCceEeecCCCCHHHHHHHHHHHH
Confidence 5789999999985 999999999999999999998862 222222222211 234678999999999999888764
Q ss_pred ----CccEEEEcccccCch---------hhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR---------YAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~---------~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|++|||||..... ...++.+..+++|+.+...+.+++.... ...+||++||.+....
T Consensus 80 ~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~------- 152 (262)
T PRK07984 80 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERA------- 152 (262)
T ss_pred hhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCC-------
Confidence 589999999975321 1122334678999999877777654321 1238999998654321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
......|++||.+.+.+++.++.++ |+++++|.||.|..+-...-.........+....+ +
T Consensus 153 -----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~--------- 216 (262)
T PRK07984 153 -----IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTP--I--------- 216 (262)
T ss_pred -----CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCC--C---------
Confidence 1234679999999999999998764 89999999999976521100001111111111111 1
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.-+...+|++.+++.++...... ..|+++.+.++.
T Consensus 217 -~r~~~pedva~~~~~L~s~~~~~----------itG~~i~vdgg~ 251 (262)
T PRK07984 217 -RRTVTIEDVGNSAAFLCSDLSAG----------ISGEVVHVDGGF 251 (262)
T ss_pred -cCCCCHHHHHHHHHHHcCccccc----------ccCcEEEECCCc
Confidence 12677899999999988764432 334777777653
No 190
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=1.9e-20 Score=175.71 Aligned_cols=228 Identities=10% Similarity=0.043 Sum_probs=153.4
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 77 TRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 77 ~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+++|+++||||+ ++||+++++.|+++|++|++.+|+.. ..+.......+ .. .. .++++|++|.++++++++.+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~-~~~~~~~~~~~-~~-~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQE-LG-SD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHH-HHHHHHHHHHh-cC-Cc-eEEEecCCCHHHHHHHHHHHH
Confidence 468999999997 79999999999999999999998642 11122222111 11 22 67899999999998888765
Q ss_pred ----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||.... ....++.+..+++|+.|+..+.+++..... ..+||++||.+....
T Consensus 79 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~-------- 150 (274)
T PRK08415 79 KDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKY-------- 150 (274)
T ss_pred HHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccC--------
Confidence 68999999997431 111233467899999998888776654321 238999998654321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
......|++||++.+.+++.++.++ |+++++|.||.|..+............ .... ...++
T Consensus 151 ----~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~-~~~~-~~~pl---------- 214 (274)
T PRK08415 151 ----VPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMIL-KWNE-INAPL---------- 214 (274)
T ss_pred ----CCcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHh-hhhh-hhCch----------
Confidence 1234679999999999999998764 899999999999875321000000000 0000 01111
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.-+...+|+|.+++.++...... ..|+++.+.+|.
T Consensus 215 ~r~~~pedva~~v~fL~s~~~~~----------itG~~i~vdGG~ 249 (274)
T PRK08415 215 KKNVSIEEVGNSGMYLLSDLSSG----------VTGEIHYVDAGY 249 (274)
T ss_pred hccCCHHHHHHHHHHHhhhhhhc----------ccccEEEEcCcc
Confidence 12567899999999888754322 334778777764
No 191
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=3.3e-20 Score=172.82 Aligned_cols=229 Identities=12% Similarity=0.057 Sum_probs=155.7
Q ss_pred CCCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 75 RSTRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 75 ~~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
.++++|+++||||+ ++||++++++|+++|++|++.+|+.+.. +...+...+ . ..+.++++|++|.++++++++.
T Consensus 6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~-~~~~~~~~~-~--~~~~~~~~D~~~~~~v~~~~~~ 81 (258)
T PRK07533 6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR-PYVEPLAEE-L--DAPIFLPLDVREPGQLEAVFAR 81 (258)
T ss_pred cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHHHh-h--ccceEEecCcCCHHHHHHHHHH
Confidence 34688999999998 5999999999999999999999965321 111222111 1 2356899999999999888776
Q ss_pred c-----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~ 218 (424)
+ ++|++|||||.... ....++.+..+++|+.++.++++++..... ..++|++||.+...
T Consensus 82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~------- 154 (258)
T PRK07533 82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEK------- 154 (258)
T ss_pred HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccccc-------
Confidence 5 58999999997532 112234467999999998888877654321 23799999864421
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
+......|++||++.+.+++.++.++ |+++++|+||.|-.+-...-.........+....+ +
T Consensus 155 -----~~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~-------- 219 (258)
T PRK07533 155 -----VVENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAP--L-------- 219 (258)
T ss_pred -----CCccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCC--c--------
Confidence 11234679999999999999998764 89999999999977532110001112222222111 1
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
..+...+|+|.+++.++...... ..|+.+.+.++
T Consensus 220 --~r~~~p~dva~~~~~L~s~~~~~----------itG~~i~vdgg 253 (258)
T PRK07533 220 --RRLVDIDDVGAVAAFLASDAARR----------LTGNTLYIDGG 253 (258)
T ss_pred --CCCCCHHHHHHHHHHHhChhhcc----------ccCcEEeeCCc
Confidence 12567899999999988654321 33477777655
No 192
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.87 E-value=1.1e-20 Score=176.45 Aligned_cols=226 Identities=12% Similarity=0.072 Sum_probs=156.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||++++++|+++|++|++++|+.+..+.. ... ...++.++++|++|.+++.++++++
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASL----RQR--FGDHVLVVEGDVTSYADNQRAVDQTVD 76 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHH--hCCcceEEEccCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999965433221 111 1246789999999999998888764
Q ss_pred ---CccEEEEcccccCch-----hhccC----hHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR-----YAMQN----PNSYVESNIAGFVNLLETCKSSD--PQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~-----~~~~~----~~~~~~~N~~g~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||+.... ...++ .+..+++|+.++..+++++.... ...++|++||...+...
T Consensus 77 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------ 150 (263)
T PRK06200 77 AFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG------ 150 (263)
T ss_pred hcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC------
Confidence 689999999974321 11111 34578899999888887765421 12379999997765421
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCC---------cHHHHHHHHHcCCceeEE
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDM---------AYFFFTRDIIRGKRITVY 288 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~ 288 (424)
.+...|+.||.+.+.+++.++.++ ++++++|.||.|..+-..... ..+.....+... .+
T Consensus 151 ------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~p-- 220 (263)
T PRK06200 151 ------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAI--TP-- 220 (263)
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcC--CC--
Confidence 334679999999999999998875 599999999999776321100 000011111111 11
Q ss_pred ecCCCCccccccccHHHHHHHHHHHhhhc-cccCCCCCCCCCCCCcceEEcCCC
Q 042406 289 EAPDGASVARDFTYIDDIVKGCLAGLDTA-KKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 289 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
..-+...+|++.+++.++... ... ..|+++.+.+|
T Consensus 221 --------~~r~~~~~eva~~~~fl~s~~~~~~----------itG~~i~vdgG 256 (263)
T PRK06200 221 --------LQFAPQPEDHTGPYVLLASRRNSRA----------LTGVVINADGG 256 (263)
T ss_pred --------CCCCCCHHHHhhhhhheecccccCc----------ccceEEEEcCc
Confidence 123677899999999888654 321 34478888765
No 193
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=3e-20 Score=172.97 Aligned_cols=230 Identities=13% Similarity=0.066 Sum_probs=154.8
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
++++|+++||||+ ++||++++++|+++|++|++.+|+... .+...+...+ ....++.++++|++|.++++++++.+
T Consensus 4 ~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~-~~~~~~~~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~~ 81 (257)
T PRK08594 4 SLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL-EKEVRELADT-LEGQESLLLPCDVTSDEEITACFETI 81 (257)
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc-hHHHHHHHHH-cCCCceEEEecCCCCHHHHHHHHHHH
Confidence 4678999999997 899999999999999999999885322 1222222221 12356889999999999998888754
Q ss_pred -----CccEEEEcccccCc-----h---hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV-----R---YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~-----~---~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|++|||||.... . ...++....+++|+.+...+++++..... ..+||++||....-.
T Consensus 82 ~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~------- 154 (257)
T PRK08594 82 KEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERV------- 154 (257)
T ss_pred HHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccC-------
Confidence 58999999997531 1 11122346789999998877776654321 238999999654311
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
......|++||++.+.+++.++.++ |+++++|+||.|..+......-.......+....+
T Consensus 155 -----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------------ 217 (257)
T PRK08594 155 -----VQNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAP------------ 217 (257)
T ss_pred -----CCCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCC------------
Confidence 1234679999999999999998764 79999999999987621100000011111111111
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
...+...+|++.+++.++...... ..|+++.+.+|
T Consensus 218 ~~r~~~p~~va~~~~~l~s~~~~~----------~tG~~~~~dgg 252 (257)
T PRK08594 218 LRRTTTQEEVGDTAAFLFSDLSRG----------VTGENIHVDSG 252 (257)
T ss_pred ccccCCHHHHHHHHHHHcCccccc----------ccceEEEECCc
Confidence 112567899999999988764432 33477777655
No 194
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.87 E-value=8.4e-21 Score=181.35 Aligned_cols=188 Identities=13% Similarity=0.024 Sum_probs=135.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+.+........... ......+.++.+|++|.+++++++++.
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 91 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITA-ATPGADVTLQELDLTSLASVRAAADALRA 91 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hCCCCceEEEECCCCCHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999976543332222221 112346889999999999999888754
Q ss_pred ---CccEEEEcccccCchh--hccChHHHHHHHHHH----HHHHHHHHHhcCCCCeEEEecCCcccC--CCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY--AMQNPNSYVESNIAG----FVNLLETCKSSDPQPAIVWASSSSVYG--VNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~--~~~~~~~~~~~N~~g----~~~ll~a~~~~~~~~~~v~~SS~~vyg--~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.| +..+++.+++.+.+ +||++||.+.+. .........+.
T Consensus 92 ~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~-~iV~vSS~~~~~~~~~~~~~~~~~~ 170 (306)
T PRK06197 92 AYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGS-RVVTVSSGGHRIRAAIHFDDLQWER 170 (306)
T ss_pred hCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCC-EEEEECCHHHhccCCCCccccCccc
Confidence 5899999999754321 234457789999999 55566666665543 999999976543 21111121111
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEE--EEeccccCCCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITG--LRFFTVYGPWG 266 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~--vrp~~v~G~~~ 266 (424)
...+...|+.||++.+.+++.+++++ ++++++ ++||.|..+..
T Consensus 171 -~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~ 218 (306)
T PRK06197 171 -RYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA 218 (306)
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence 12456789999999999999998765 666655 47999987643
No 195
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=2.7e-20 Score=171.29 Aligned_cols=206 Identities=18% Similarity=0.154 Sum_probs=151.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++++++||||+|+||.+++++|+++|++|++++|+............ ....++.++.+|++|.+++.++++..
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVE---AYGVKVVIATADVSDYEEVTAAIEQLKN 80 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---HhCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 3567899999999999999999999999999999997654332222221 12346889999999999999888754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+|||+||...... ..++.+..+++|+.++.++++++.. .+. +++|++||...+...
T Consensus 81 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~~ss~~~~~~~--------- 150 (239)
T PRK07666 81 ELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQS-GDIINISSTAGQKGA--------- 150 (239)
T ss_pred HcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-cEEEEEcchhhccCC---------
Confidence 5799999999754321 1223457899999999888887753 333 389999997654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|+.+|.+.+.+++.++.+ .|+++++|+||.+.++..... . ... +.. ..
T Consensus 151 ---~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~------------~--~~~----~~~---~~ 206 (239)
T PRK07666 151 ---AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL------------G--LTD----GNP---DK 206 (239)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc------------c--ccc----cCC---CC
Confidence 34567999999999999888765 489999999999988733210 0 000 011 23
Q ss_pred cccHHHHHHHHHHHhhhcc
Q 042406 300 FTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~ 318 (424)
++..+|+|++++.++....
T Consensus 207 ~~~~~~~a~~~~~~l~~~~ 225 (239)
T PRK07666 207 VMQPEDLAEFIVAQLKLNK 225 (239)
T ss_pred CCCHHHHHHHHHHHHhCCC
Confidence 6788999999999998753
No 196
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3e-20 Score=176.24 Aligned_cols=206 Identities=17% Similarity=0.215 Sum_probs=150.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
...+++|+++||||+|+||++++++|+++|++|++++|+.+..+........ ....+.++.+|++|.+++.++++.+
T Consensus 35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~---~~~~~~~~~~Dl~d~~~v~~~~~~~ 111 (293)
T PRK05866 35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITR---AGGDAMAVPCDLSDLDAVDALVADV 111 (293)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999975443332222111 1245789999999999999888843
Q ss_pred -----CccEEEEcccccCchhhc------cChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRYAM------QNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~~~------~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
++|+||||||........ .+.+..+.+|+.|+.++++++ ++.+.+ ++|++||.+++...
T Consensus 112 ~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~~----- 185 (293)
T PRK05866 112 EKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDG-HIINVATWGVLSEA----- 185 (293)
T ss_pred HHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-EEEEECChhhcCCC-----
Confidence 679999999975432211 223568999999987777654 355544 89999997665421
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
......|++||++.+.+++.++.++ |+++++++||.|-++.... ...+ .+
T Consensus 186 ------~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~----------------~~~~----~~- 238 (293)
T PRK05866 186 ------SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAP----------------TKAY----DG- 238 (293)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccc----------------cccc----cC-
Confidence 1234789999999999999987764 8999999999887662210 0000 00
Q ss_pred cccccccHHHHHHHHHHHhhhc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
...+..+++|+.++.++++.
T Consensus 239 --~~~~~pe~vA~~~~~~~~~~ 258 (293)
T PRK05866 239 --LPALTADEAAEWMVTAARTR 258 (293)
T ss_pred --CCCCCHHHHHHHHHHHHhcC
Confidence 12467899999999998864
No 197
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=2.8e-20 Score=170.69 Aligned_cols=217 Identities=17% Similarity=0.163 Sum_probs=154.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-Cc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-AF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~~ 155 (424)
+.+|+++||||+|+||+++++.|+++|++|++++|+.... ...++.++.+|+++. ++++++.. ++
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~------------~~~~~~~~~~D~~~~--~~~~~~~~~~i 68 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD------------LSGNFHFLQLDLSDD--LEPLFDWVPSV 68 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc------------cCCcEEEEECChHHH--HHHHHHhhCCC
Confidence 5678999999999999999999999999999999864311 124688999999997 45554443 56
Q ss_pred cEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 156 THVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 156 d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
|+||||||.... ....++.+..+++|+.++.++++++.. .+. ++||++||...+... .
T Consensus 69 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~~sS~~~~~~~------------~ 135 (235)
T PRK06550 69 DILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKS-GIIINMCSIASFVAG------------G 135 (235)
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEEcChhhccCC------------C
Confidence 999999996421 112334467899999999999887753 333 389999997654321 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
....|+.+|.+.+.+++.++.++ |+++++|+||.+.++..........+...+....+ ...+...
T Consensus 136 ~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 203 (235)
T PRK06550 136 GGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETP------------IKRWAEP 203 (235)
T ss_pred CCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCC------------cCCCCCH
Confidence 34679999999999999988765 89999999999988854322111122222222211 1226778
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+|+|++++.++...... ..|.++.+.+|.
T Consensus 204 ~~~a~~~~~l~s~~~~~----------~~g~~~~~~gg~ 232 (235)
T PRK06550 204 EEVAELTLFLASGKADY----------MQGTIVPIDGGW 232 (235)
T ss_pred HHHHHHHHHHcChhhcc----------CCCcEEEECCce
Confidence 99999999988654321 334777777653
No 198
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.87 E-value=6.2e-20 Score=171.42 Aligned_cols=229 Identities=15% Similarity=0.098 Sum_probs=158.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+.+|+++||||+|+||+++++.|+++|++|++++|+.. ......... ....++.++.+|++|.+++.++++..
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 78 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELC---GRGHRCTAVVADVRDPASVAAAIKRAKE 78 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHH---HhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 356899999999999999999999999999999999643 111111111 12346789999999999999888764
Q ss_pred ---CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||....... ..+.+..+++|+.++.++++++.. .+. .+||++||......
T Consensus 79 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~isS~~~~~~---------- 147 (263)
T PRK08226 79 KEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKD-GRIVMMSSVTGDMV---------- 147 (263)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-cEEEEECcHHhccc----------
Confidence 68999999997543221 222345799999999988887653 333 38999998644210
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC------CCcHHHHHHHHHcCCceeEEecCCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP------DMAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
.......|+.+|.+.+.+++.++.++ +++++.|+||.+.++-... ......+...+..+.+.
T Consensus 148 -~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~-------- 218 (263)
T PRK08226 148 -ADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL-------- 218 (263)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC--------
Confidence 11335689999999999999998765 7999999999998873210 00011223333332221
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+...+|+|.+++.++...... ..|+++.+.+|-
T Consensus 219 ----~~~~~~~~va~~~~~l~~~~~~~----------~~g~~i~~dgg~ 253 (263)
T PRK08226 219 ----RRLADPLEVGELAAFLASDESSY----------LTGTQNVIDGGS 253 (263)
T ss_pred ----CCCCCHHHHHHHHHHHcCchhcC----------CcCceEeECCCc
Confidence 12567899999998887543321 344777777653
No 199
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3.2e-20 Score=173.51 Aligned_cols=231 Identities=13% Similarity=0.127 Sum_probs=158.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+++++|+++||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++++
T Consensus 5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~i~~~~~~~~ 81 (264)
T PRK07576 5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQ---AGPEGLGVSADVRDYAAVEAAFAQIA 81 (264)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH---hCCceEEEECCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999975433222111111 1235788999999999999888765
Q ss_pred ----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSSD--PQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++...- .+.+||++||...+..
T Consensus 82 ~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~----------- 150 (264)
T PRK07576 82 DEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP----------- 150 (264)
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC-----------
Confidence 579999999864321 1223345688999999999988775421 1238999999765421
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcH-HHHHHHHHcCCceeEEecCCCCccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAY-FFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
......|+.+|.+.+.+++.++.++ |+++++|+||.+.+......... ......+... .+ ...
T Consensus 151 -~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~--~~----------~~~ 217 (264)
T PRK07576 151 -MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQS--VP----------LKR 217 (264)
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhc--CC----------CCC
Confidence 1345789999999999999988664 79999999999875321110000 0011111111 11 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+...+|+|++++.++...... ..|..+.+.++.
T Consensus 218 ~~~~~dva~~~~~l~~~~~~~----------~~G~~~~~~gg~ 250 (264)
T PRK07576 218 NGTKQDIANAALFLASDMASY----------ITGVVLPVDGGW 250 (264)
T ss_pred CCCHHHHHHHHHHHcChhhcC----------ccCCEEEECCCc
Confidence 567899999999998754321 233677777653
No 200
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.87 E-value=3.5e-20 Score=172.93 Aligned_cols=229 Identities=13% Similarity=0.075 Sum_probs=153.1
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGA--AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++|+++|||| +++||+++++.|+++|++|++.+|.. +..+...+.... ......+++|++|.++++++++.+
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAE---LDSELVFRCDVASDDEINQVFADL 78 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhc---cCCceEEECCCCCHHHHHHHHHHH
Confidence 467899999997 67999999999999999999987742 211222222111 123467899999999999888765
Q ss_pred -----CccEEEEcccccCch-----h----hccChHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEecCCcccCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR-----Y----AMQNPNSYVESNIAGFVNLLETCKSSD--PQPAIVWASSSSVYGVNKKVP 217 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~-----~----~~~~~~~~~~~N~~g~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~ 217 (424)
++|++|||||+.... . ..++.+..+++|+.++..+.+++.... .+.+||++||.+.+..
T Consensus 79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~----- 153 (261)
T PRK08690 79 GKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA----- 153 (261)
T ss_pred HHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccC-----
Confidence 689999999986421 0 111234567899998877766543321 1238999998765421
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
......|+++|.+.+.+++.++.+ +|+++++|.||.|-.+....-.........+....+ +
T Consensus 154 -------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~------- 217 (261)
T PRK08690 154 -------IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNP--L------- 217 (261)
T ss_pred -------CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCC--C-------
Confidence 133477999999999999998765 389999999999977632110000111122221111 1
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.-+...+|+|++++.++...... ..|+++.+.+|.
T Consensus 218 ---~r~~~peevA~~v~~l~s~~~~~----------~tG~~i~vdgG~ 252 (261)
T PRK08690 218 ---RRNVTIEEVGNTAAFLLSDLSSG----------ITGEITYVDGGY 252 (261)
T ss_pred ---CCCCCHHHHHHHHHHHhCcccCC----------cceeEEEEcCCc
Confidence 12667899999999998765432 344778777654
No 201
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=5.4e-20 Score=171.13 Aligned_cols=226 Identities=14% Similarity=0.052 Sum_probs=155.9
Q ss_pred CCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEeCCCCch-------hhhHHHHHhhh-hccCCeEEEEccCCCHHHH
Q 042406 77 TRGLTVLVTGAAG--FVGSHVSLALKKRGDGVLGLDNFNNYY-------ETSLKKARKGL-LERAGVFVIDADINDKSLL 146 (424)
Q Consensus 77 ~~~~~vlItGg~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v 146 (424)
+++|+|+||||+| +||.+++++|+++|++|++++|+.... ........... ....+++++.+|++|.+++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 5678999999995 799999999999999999999872211 00000011111 1134689999999999998
Q ss_pred HHHhhcc-----CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEecCCcccCCCC
Q 042406 147 DKIFNVV-----AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKSS---DPQPAIVWASSSSVYGVNK 214 (424)
Q Consensus 147 ~~~~~~~-----~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~ 214 (424)
.++++.. ++|+||||||....... .++.+..+++|+.++.++++++... ...++||++||...++..
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~- 161 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPM- 161 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCC-
Confidence 8887764 58999999997543221 2234568999999999999887543 122389999998776521
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecC
Q 042406 215 KVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAP 291 (424)
Q Consensus 215 ~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (424)
.....|+.+|++.+.+++.++.++ +++++.++||.+..+.... .....+....+
T Consensus 162 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-----~~~~~~~~~~~------- 218 (256)
T PRK12748 162 -----------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-----ELKHHLVPKFP------- 218 (256)
T ss_pred -----------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-----hHHHhhhccCC-------
Confidence 235789999999999999987664 8999999999987764321 11111111100
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
. ..+...+|+++++..++...... ..++++++.++
T Consensus 219 -~----~~~~~~~~~a~~~~~l~~~~~~~----------~~g~~~~~d~g 253 (256)
T PRK12748 219 -Q----GRVGEPVDAARLIAFLVSEEAKW----------ITGQVIHSEGG 253 (256)
T ss_pred -C----CCCcCHHHHHHHHHHHhCccccc----------ccCCEEEecCC
Confidence 0 11445799999998877654321 23478888765
No 202
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.87 E-value=4e-20 Score=176.47 Aligned_cols=211 Identities=18% Similarity=0.140 Sum_probs=146.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc-hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
..++++|+++||||+|+||++++++|+++|++|++.++.... ........+. ...++.++.+|++|.+++.++++.
T Consensus 7 ~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~---~g~~~~~~~~Dv~d~~~~~~~~~~ 83 (306)
T PRK07792 7 TTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRA---AGAKAVAVAGDISQRATADELVAT 83 (306)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHh---cCCeEEEEeCCCCCHHHHHHHHHH
Confidence 446789999999999999999999999999999999885432 1121111111 234688999999999999888775
Q ss_pred c----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhcC----------CCCeEEEecCCcccCCCC
Q 042406 153 V----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSSD----------PQPAIVWASSSSVYGVNK 214 (424)
Q Consensus 153 ~----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~----------~~~~~v~~SS~~vyg~~~ 214 (424)
+ ++|+||||||..... ....+.+..+++|+.|+.++++++.... ...+||++||.+.+...
T Consensus 84 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 162 (306)
T PRK07792 84 AVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP- 162 (306)
T ss_pred HHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC-
Confidence 3 579999999986532 1233446789999999999988764211 11389999997654321
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecC
Q 042406 215 KVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAP 291 (424)
Q Consensus 215 ~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (424)
.....|+++|.+.+.+++.++.+ +|+++++|+|+. -.+ +...+....+ ...
T Consensus 163 -----------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~----------~~~~~~~~~~-~~~--- 216 (306)
T PRK07792 163 -----------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTA----------MTADVFGDAP-DVE--- 216 (306)
T ss_pred -----------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCc----------hhhhhccccc-hhh---
Confidence 23467999999999999998875 489999999973 111 0001100000 000
Q ss_pred CCCccccccccHHHHHHHHHHHhhhc
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
......+..+|++.++..++...
T Consensus 217 ---~~~~~~~~pe~va~~v~~L~s~~ 239 (306)
T PRK07792 217 ---AGGIDPLSPEHVVPLVQFLASPA 239 (306)
T ss_pred ---hhccCCCCHHHHHHHHHHHcCcc
Confidence 01123567999999998877653
No 203
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.87 E-value=9.9e-21 Score=178.23 Aligned_cols=166 Identities=16% Similarity=0.132 Sum_probs=129.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
.+|+|+||||+|+||+++++.|+++|++|++++|+.+.... +...+++++.+|++|.++++++++.+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~---------l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 73 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAA---------LEAEGLEAFQLDYAEPESIAALVAQVLELS 73 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH---------HHHCCceEEEccCCCHHHHHHHHHHHHHHc
Confidence 35789999999999999999999999999999996543211 11236889999999999988887754
Q ss_pred --CccEEEEcccccCchhhc----cChHHHHHHHHHH----HHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRYAM----QNPNSYVESNIAG----FVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~~~----~~~~~~~~~N~~g----~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||........ ++.+..+++|+.| +.++++.+++.+.+ +||++||...+..
T Consensus 74 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g-~iv~isS~~~~~~----------- 141 (277)
T PRK05993 74 GGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQG-RIVQCSSILGLVP----------- 141 (277)
T ss_pred CCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCC-EEEEECChhhcCC-----------
Confidence 579999999975432221 2235689999999 56677777777655 8999999655431
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCC
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPW 265 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~ 265 (424)
..+...|+.||++.+.+++.++.+ .|+++++|+||.|-.+.
T Consensus 142 -~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~ 185 (277)
T PRK05993 142 -MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRF 185 (277)
T ss_pred -CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCch
Confidence 134578999999999999998754 48999999999997763
No 204
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.87 E-value=2.9e-20 Score=172.92 Aligned_cols=224 Identities=15% Similarity=0.144 Sum_probs=152.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+|+||||+|+||.+++++|+++|++|++++|+....+... .. . +..++++|++|.++++++++..
T Consensus 4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~----~~-~---~~~~~~~D~~~~~~~~~~~~~~~~ 75 (255)
T PRK06057 4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAA----DE-V---GGLFVPTDVTDEDAVNALFDTAAE 75 (255)
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HH-c---CCcEEEeeCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999654322111 11 1 2268899999999999888764
Q ss_pred ---CccEEEEcccccCch------hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCC-cccCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR------YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSS-SVYGVNKKVPFS 219 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~------~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~-~vyg~~~~~~~~ 219 (424)
++|+||||||..... ...+..+..+++|+.|+.++++.+. +.+.+ ++|++||. ++++..
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g-~iv~~sS~~~~~g~~------ 148 (255)
T PRK06057 76 TYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKG-SIINTASFVAVMGSA------ 148 (255)
T ss_pred HcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCc-EEEEEcchhhccCCC------
Confidence 679999999975321 1122346789999999877766553 34433 88888885 455421
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.+...|+.+|++.+.+++.++.++ |+++++|+||.+.+|....... .-...... .+... +
T Consensus 149 ------~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~--~~~~~~~~--~~~~~--~----- 211 (255)
T PRK06057 149 ------TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFA--KDPERAAR--RLVHV--P----- 211 (255)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhcc--CCHHHHHH--HHhcC--C-----
Confidence 234679999999988888876543 8999999999999874321100 00000000 00000 0
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
...+..++|+++++..++...... ..+..+.+.++
T Consensus 212 ~~~~~~~~~~a~~~~~l~~~~~~~----------~~g~~~~~~~g 246 (255)
T PRK06057 212 MGRFAEPEEIAAAVAFLASDDASF----------ITASTFLVDGG 246 (255)
T ss_pred CCCCcCHHHHHHHHHHHhCccccC----------ccCcEEEECCC
Confidence 114788999999998877654322 23367777654
No 205
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.87 E-value=3.3e-20 Score=172.67 Aligned_cols=215 Identities=13% Similarity=0.089 Sum_probs=152.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+.+|+|+||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++.+|+++.+++.+++++.
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEA---EGGAAHVVSLDVTDYQSIKAAVAHAET 82 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999975543322221111 1346889999999999999888754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCC-------CCeEEEecCCcccCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDP-------QPAIVWASSSSVYGVNKK 215 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~-------~~~~v~~SS~~vyg~~~~ 215 (424)
++|+||||||...... ...+.+..+++|+.++.++++++.. ... ..++|++||...+..
T Consensus 83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~--- 159 (258)
T PRK06949 83 EAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV--- 159 (258)
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC---
Confidence 5799999999754321 1234567899999999888876642 211 238999999776542
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCC
Q 042406 216 VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 216 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
..+...|+.+|++.+.+++.++.++ ++++++|+||.|+++...... .......+... ++
T Consensus 160 ---------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~--~~------ 221 (258)
T PRK06949 160 ---------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHW-ETEQGQKLVSM--LP------ 221 (258)
T ss_pred ---------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhcc-ChHHHHHHHhc--CC------
Confidence 1345789999999999999988764 899999999999988543110 00111111111 11
Q ss_pred CCccccccccHHHHHHHHHHHhhhcc
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
...+...+|++++++.++....
T Consensus 222 ----~~~~~~p~~~~~~~~~l~~~~~ 243 (258)
T PRK06949 222 ----RKRVGKPEDLDGLLLLLAADES 243 (258)
T ss_pred ----CCCCcCHHHHHHHHHHHhChhh
Confidence 1125557999999999887544
No 206
>PRK07069 short chain dehydrogenase; Validated
Probab=99.86 E-value=3.8e-20 Score=171.47 Aligned_cols=212 Identities=16% Similarity=0.161 Sum_probs=146.9
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEeCC-CCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNF-NNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
+++||||+|+||+++++.|+++|++|++++|+ .+.......... .......+.++.+|++|.+++.++++.+ +
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 79 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEIN-AAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGG 79 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHH-hcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 38999999999999999999999999999997 332222211111 1111234567899999999998888754 5
Q ss_pred ccEEEEcccccCchhh----ccChHHHHHHHHH----HHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRYA----MQNPNSYVESNIA----GFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~----g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|+||||||....... .++.+..+++|+. ++.++++++++.+.+ +||++||...+... .
T Consensus 80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~ii~~ss~~~~~~~------------~ 146 (251)
T PRK07069 80 LSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPA-SIVNISSVAAFKAE------------P 146 (251)
T ss_pred ccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCc-EEEEecChhhccCC------------C
Confidence 7999999997643211 2233567889998 677788888776654 89999998776532 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh-----CCcEEEEEeccccCCCCCCCC---cHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY-----GLSITGLRFFTVYGPWGRPDM---AYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~-----~i~~~~vrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
....|+.+|.+.+.+++.++.+. +++++.|+||.+.+|...... ........+..+.+ ..
T Consensus 147 ~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 214 (251)
T PRK07069 147 DYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP------------LG 214 (251)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC------------CC
Confidence 34679999999999999987663 489999999999987532100 00011111111111 12
Q ss_pred ccccHHHHHHHHHHHhhhcc
Q 042406 299 DFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~ 318 (424)
.+.+++|++.+++.++..+.
T Consensus 215 ~~~~~~~va~~~~~l~~~~~ 234 (251)
T PRK07069 215 RLGEPDDVAHAVLYLASDES 234 (251)
T ss_pred CCcCHHHHHHHHHHHcCccc
Confidence 35678999999998776543
No 207
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.86 E-value=4.5e-20 Score=193.01 Aligned_cols=242 Identities=17% Similarity=0.139 Sum_probs=160.8
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
...+++|++|||||+|+||++++++|+++|++|++++|+.+........... ......+..+++|++|.+++.++++++
T Consensus 409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~-~~~~~~~~~v~~Dvtd~~~v~~a~~~i 487 (676)
T TIGR02632 409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEING-QFGAGRAVALKMDVTDEQAVKAAFADV 487 (676)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-hcCCCcEEEEECCCCCHHHHHHHHHHH
Confidence 4557899999999999999999999999999999999975443322221111 112235788999999999999988865
Q ss_pred -----CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||....... ..+.+..+++|+.+...+.+ .+++.+...+||++||...+...
T Consensus 488 ~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~------- 560 (676)
T TIGR02632 488 ALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG------- 560 (676)
T ss_pred HHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC-------
Confidence 68999999997543221 12235678899998766654 44444434489999996543211
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEecccc-CCCCCCCCcHHHHHHHHHcCCce----eEEecCC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVY-GPWGRPDMAYFFFTRDIIRGKRI----TVYEAPD 292 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 292 (424)
.....|+.||++.+.+++.++.+. |+++++|+|+.|+ |.+......... .....+... ..+ .
T Consensus 561 -----~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~--~~~~~~~~~~~~~~~~---~ 630 (676)
T TIGR02632 561 -----KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREE--RAAAYGIPADELEEHY---A 630 (676)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhh--hhhcccCChHHHHHHH---H
Confidence 345789999999999999998764 7999999999987 322111100000 000000000 000 0
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.......+++.+|+|++++.++...... ..|+++++.+|..
T Consensus 631 ~r~~l~r~v~peDVA~av~~L~s~~~~~----------~TG~~i~vDGG~~ 671 (676)
T TIGR02632 631 KRTLLKRHIFPADIAEAVFFLASSKSEK----------TTGCIITVDGGVP 671 (676)
T ss_pred hcCCcCCCcCHHHHHHHHHHHhCCcccC----------CcCcEEEECCCch
Confidence 1122234788999999999887643321 3348999988754
No 208
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.86 E-value=3.7e-20 Score=171.30 Aligned_cols=225 Identities=15% Similarity=0.099 Sum_probs=150.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC-CchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN-NYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
+|+|+||||+|+||..+++.|+++|++|+++.+.. +........... ...++.++.+|++|.+++.++++..
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 78 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRA---AGGRACVVAGDVANEADVIAMFDAVQSAF 78 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999998776433 222111111111 2346889999999999998887654
Q ss_pred -CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHHhc----C--CCCeEEEecCCcc-cCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCKSS----D--PQPAIVWASSSSV-YGVNKKVPFSE 220 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~~----~--~~~~~v~~SS~~v-yg~~~~~~~~e 220 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.+. + ...+||++||.+. ++..
T Consensus 79 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~------- 151 (248)
T PRK06947 79 GRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP------- 151 (248)
T ss_pred CCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC-------
Confidence 589999999975321 122233567999999988887544322 1 1236999998654 3321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.....|+.||.+.+.+++.+++++ |+++++++||.+.+|........ ..........+ .
T Consensus 152 -----~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~--~---------- 213 (248)
T PRK06947 152 -----NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQP-GRAARLGAQTP--L---------- 213 (248)
T ss_pred -----CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCH-HHHHHHhhcCC--C----------
Confidence 123569999999999999998765 89999999999998743211111 11111111111 0
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
.-...++|++++++.++..+... ..|+.+.+.++
T Consensus 214 ~~~~~~e~va~~~~~l~~~~~~~----------~~G~~~~~~gg 247 (248)
T PRK06947 214 GRAGEADEVAETIVWLLSDAASY----------VTGALLDVGGG 247 (248)
T ss_pred CCCcCHHHHHHHHHHHcCccccC----------cCCceEeeCCC
Confidence 01456899999999988765421 23367776654
No 209
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.86 E-value=4.1e-20 Score=172.28 Aligned_cols=226 Identities=16% Similarity=0.160 Sum_probs=152.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
|+++||||+|+||++++++|+++|++|++++|+.+.......... ...++.++++|++|.++++++++.+ +
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~ 76 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELK----EYGEVYAVKADLSDKDDLKNLVKEAWELLGG 76 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH----hcCCceEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 689999999999999999999999999999997644333222221 1236889999999999999888754 6
Q ss_pred ccEEEEcccccCch---hhc---cChHHHHHHHHHHHHHHH----HHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVR---YAM---QNPNSYVESNIAGFVNLL----ETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~---~~~---~~~~~~~~~N~~g~~~ll----~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
+|+||||||..... ..+ .+....+.+|+.++..+. ..+.+.....+||++||......
T Consensus 77 id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~------------ 144 (259)
T PRK08340 77 IDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP------------ 144 (259)
T ss_pred CCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC------------
Confidence 89999999974321 111 122346778887765444 33332222348999999876431
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC---------cHHH-HHHHHHcCCceeEEecC
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM---------AYFF-FTRDIIRGKRITVYEAP 291 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~ 291 (424)
..+...|+.+|.+.+.+++.++.++ |++++.|+||.+-.|...... .... ....+.... +
T Consensus 145 ~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p----- 217 (259)
T PRK08340 145 MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT--P----- 217 (259)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccC--C-----
Confidence 1345789999999999999999875 799999999998776432100 0000 001111110 1
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
..-+...+|+|++++.++...... ..|++..+.+|..
T Consensus 218 -----~~r~~~p~dva~~~~fL~s~~~~~----------itG~~i~vdgg~~ 254 (259)
T PRK08340 218 -----LKRTGRWEELGSLIAFLLSENAEY----------MLGSTIVFDGAMT 254 (259)
T ss_pred -----ccCCCCHHHHHHHHHHHcCccccc----------ccCceEeecCCcC
Confidence 112667899999999888765432 3447777776643
No 210
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.86 E-value=5.6e-20 Score=170.73 Aligned_cols=201 Identities=18% Similarity=0.135 Sum_probs=145.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCc-hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++|+|+||||+|+||++++++|+++| ++|++++|+.+. .+....+... ....+++++.+|++|.+++.++++..
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~--~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKA--AGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHh--cCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 56889999999999999999999995 899999998764 3333222221 12347899999999999877666533
Q ss_pred --CccEEEEcccccCchh-hccCh---HHHHHHHHHHHHH----HHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY-AMQNP---NSYVESNIAGFVN----LLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~-~~~~~---~~~~~~N~~g~~~----ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|++|||+|...... ...+. ...+++|+.++.+ +++.+++.+.+ +||++||...+..
T Consensus 85 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~-~iv~isS~~g~~~----------- 152 (253)
T PRK07904 85 GGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFG-QIIAMSSVAGERV----------- 152 (253)
T ss_pred cCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCc-eEEEEechhhcCC-----------
Confidence 6899999999854321 11122 2468999998765 56677776654 9999999754321
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
..+...|+.||++.+.+.+.+..+ .++++++++||.+..+.... ... . ...
T Consensus 153 -~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~-------------~~~---------~---~~~ 206 (253)
T PRK07904 153 -RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH-------------AKE---------A---PLT 206 (253)
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc-------------CCC---------C---CCC
Confidence 123467999999999888887654 48999999999998762210 000 0 114
Q ss_pred ccHHHHHHHHHHHhhhcc
Q 042406 301 TYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~ 318 (424)
+..+|+|+.++.++++..
T Consensus 207 ~~~~~~A~~i~~~~~~~~ 224 (253)
T PRK07904 207 VDKEDVAKLAVTAVAKGK 224 (253)
T ss_pred CCHHHHHHHHHHHHHcCC
Confidence 678999999999998654
No 211
>PRK08264 short chain dehydrogenase; Validated
Probab=99.86 E-value=2.9e-20 Score=170.94 Aligned_cols=166 Identities=19% Similarity=0.126 Sum_probs=131.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
...+++++||||+|+||+++++.|+++|+ +|++++|+.+.... ...++.++.+|++|.+++.++++..
T Consensus 3 ~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~~~~ 72 (238)
T PRK08264 3 DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----------LGPRVVPLQLDVTDPASVAAAAEAAS 72 (238)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----------cCCceEEEEecCCCHHHHHHHHHhcC
Confidence 35678999999999999999999999998 99999996542211 2357899999999999999998875
Q ss_pred CccEEEEcccccC-ch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAG-VR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ~~d~vi~~Ag~~~-~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+|||+||... .. ...++....+++|+.++.++++++.+ .+. ++||++||...+...
T Consensus 73 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~v~~sS~~~~~~~----------- 140 (238)
T PRK08264 73 DVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGG-GAIVNVLSVLSWVNF----------- 140 (238)
T ss_pred CCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-CEEEEEcChhhccCC-----------
Confidence 4799999999832 21 12233456899999999999888653 343 389999997776421
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCC
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGP 264 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~ 264 (424)
.+...|+.+|.+.+.+.+.++.+. +++++++|||.+.++
T Consensus 141 -~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~ 182 (238)
T PRK08264 141 -PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTD 182 (238)
T ss_pred -CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccc
Confidence 345789999999999999988764 899999999999776
No 212
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.86 E-value=5.8e-20 Score=170.01 Aligned_cols=202 Identities=14% Similarity=0.103 Sum_probs=147.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||++++++|+++|++|++++|+.+.......... ......++.++++|++|.+++.+++++.
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELL-ARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHH-hhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999997654333222211 1112357899999999999998888754
Q ss_pred CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||+...... ....+..+++|+.++.++++++. +.+.+ +||++||...+... +
T Consensus 81 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~~sS~~~~~~~----------~- 148 (248)
T PRK08251 81 GLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSG-HLVLISSVSAVRGL----------P- 148 (248)
T ss_pred CCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-eEEEEeccccccCC----------C-
Confidence 58999999998543221 22235688999999888877663 44544 89999996543211 0
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.+...|+.||++.+.+++.++.++ ++++++++||.+.++.... .+. ....+.
T Consensus 149 ~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~------------~~~-------------~~~~~~ 203 (248)
T PRK08251 149 GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAK------------AKS-------------TPFMVD 203 (248)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhc------------ccc-------------CCccCC
Confidence 234789999999999999888664 7999999999998762211 000 012567
Q ss_pred HHHHHHHHHHHhhhcc
Q 042406 303 IDDIVKGCLAGLDTAK 318 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~ 318 (424)
.+|.|++++.+++...
T Consensus 204 ~~~~a~~i~~~~~~~~ 219 (248)
T PRK08251 204 TETGVKALVKAIEKEP 219 (248)
T ss_pred HHHHHHHHHHHHhcCC
Confidence 8999999999987543
No 213
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.86 E-value=1.4e-19 Score=168.41 Aligned_cols=226 Identities=13% Similarity=0.062 Sum_probs=153.3
Q ss_pred CCCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEeCCCCch-------hhhHHHHHhhh-hccCCeEEEEccCCCHHH
Q 042406 76 STRGLTVLVTGAAG--FVGSHVSLALKKRGDGVLGLDNFNNYY-------ETSLKKARKGL-LERAGVFVIDADINDKSL 145 (424)
Q Consensus 76 ~~~~~~vlItGg~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~ 145 (424)
.+++|+++||||+| +||.+++++|+++|++|++.+|..... ........... .....+.++++|++|.++
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~ 82 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA 82 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 57889999999995 899999999999999999986532100 01111111111 123468899999999999
Q ss_pred HHHHhhcc-----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCC
Q 042406 146 LDKIFNVV-----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 146 v~~~~~~~-----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
+.++++.. ++|+||||||..... ...++.+..+++|+.+...+.+ .+++.+. .+||++||......
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~ 161 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSG-GRIINMTSGQFQGP 161 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC-eEEEEEcccccCCC
Confidence 99888755 479999999975332 1222345689999999777644 4444333 38999999765431
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEe
Q 042406 213 NKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYE 289 (424)
Q Consensus 213 ~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (424)
..+...|+.+|++.+.+++.++.+ .|++++.|+||.+-.+.... .+...+....+.
T Consensus 162 ------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~-----~~~~~~~~~~~~---- 220 (256)
T PRK12859 162 ------------MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE-----EIKQGLLPMFPF---- 220 (256)
T ss_pred ------------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH-----HHHHHHHhcCCC----
Confidence 145688999999999999998876 48999999999987763221 111122211111
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
..+...+|+|++++.++...... ..|+++.+.+|
T Consensus 221 --------~~~~~~~d~a~~~~~l~s~~~~~----------~~G~~i~~dgg 254 (256)
T PRK12859 221 --------GRIGEPKDAARLIKFLASEEAEW----------ITGQIIHSEGG 254 (256)
T ss_pred --------CCCcCHHHHHHHHHHHhCccccC----------ccCcEEEeCCC
Confidence 12456899999999887654321 33467777654
No 214
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.86 E-value=6.5e-20 Score=169.36 Aligned_cols=226 Identities=16% Similarity=0.116 Sum_probs=158.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-eCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+.+|+++||||+|+||.++++.|+++|++|+++ +|+.+........... ...++.++.+|++|.+++.++++..
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKE---EGGDAIAVKADVSSEEDVENLVEQIVE 79 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 567899999999999999999999999999998 8865432222211111 2346889999999999998888754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+|||+||...... ..++.+..+++|+.++.++++++.. .+. ++||++||...+...
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~v~~sS~~~~~~~--------- 149 (247)
T PRK05565 80 KFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKS-GVIVNISSIWGLIGA--------- 149 (247)
T ss_pred HhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEECCHhhccCC---------
Confidence 5799999999863221 1223467899999998888777654 333 379999996654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.....|+.+|.+.+.+++.++.+. |+++++++||.+.++....- .+.....+... . ....
T Consensus 150 ---~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~--~~~~~~~~~~~-----~-------~~~~ 212 (247)
T PRK05565 150 ---SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSF--SEEDKEGLAEE-----I-------PLGR 212 (247)
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCcccccc--ChHHHHHHHhc-----C-------CCCC
Confidence 234679999999999988887664 89999999999977643321 11111111110 0 0123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+...+|++++++.++...... ..|+.+++.++.
T Consensus 213 ~~~~~~va~~~~~l~~~~~~~----------~~g~~~~~~~~~ 245 (247)
T PRK05565 213 LGKPEEIAKVVLFLASDDASY----------ITGQIITVDGGW 245 (247)
T ss_pred CCCHHHHHHHHHHHcCCccCC----------ccCcEEEecCCc
Confidence 678899999999988765432 344888887753
No 215
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.86 E-value=4.7e-20 Score=169.95 Aligned_cols=205 Identities=13% Similarity=0.086 Sum_probs=149.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
++|+++||||+|+||..++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++.+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRS---TGVKAAAYSIDLSNPEAIAPGIAELLEQF 81 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---CCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 567899999999999999999999999999999975433222111111 1346889999999999988887753
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+++|+.++.++++.+ ++.+. ++||++||...++..
T Consensus 82 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~-~~iv~isS~~~~~~~----------- 149 (241)
T PRK07454 82 GCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGG-GLIINVSSIAARNAF----------- 149 (241)
T ss_pred CCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCC-cEEEEEccHHhCcCC-----------
Confidence 5799999999754321 12234668999999988877665 33443 389999998877531
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.+...|+.+|.+.+.+++.++.+ .|+++++||||.+-++...... ....+ .....+
T Consensus 150 -~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~-------------~~~~~-------~~~~~~ 208 (241)
T PRK07454 150 -PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET-------------VQADF-------DRSAML 208 (241)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc-------------ccccc-------ccccCC
Confidence 34578999999999999988754 3899999999999876422110 00000 011257
Q ss_pred cHHHHHHHHHHHhhhcc
Q 042406 302 YIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~ 318 (424)
..+|+|++++.++..+.
T Consensus 209 ~~~~va~~~~~l~~~~~ 225 (241)
T PRK07454 209 SPEQVAQTILHLAQLPP 225 (241)
T ss_pred CHHHHHHHHHHHHcCCc
Confidence 89999999999998764
No 216
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.86 E-value=4.7e-20 Score=171.77 Aligned_cols=230 Identities=12% Similarity=0.060 Sum_probs=155.2
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCc--hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNY--YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
++++|+++||||+ ++||++++++|+++|++|++.+|+.+. ..+...+.... ...+.++.+|++|.++++++++
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~ 79 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP---LNPSLFLPCDVQDDAQIEETFE 79 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc---cCcceEeecCcCCHHHHHHHHH
Confidence 3578999999986 899999999999999999988775432 11222222111 1346789999999999998887
Q ss_pred cc-----CccEEEEcccccCc-----hh---hccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCC
Q 042406 152 VV-----AFTHVMHLAAQAGV-----RY---AMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVP 217 (424)
Q Consensus 152 ~~-----~~d~vi~~Ag~~~~-----~~---~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~ 217 (424)
.+ ++|++|||||.... .. ..++.+..+++|+.++..+++++.... ...+||++||......
T Consensus 80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~----- 154 (258)
T PRK07370 80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRA----- 154 (258)
T ss_pred HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccC-----
Confidence 65 68999999997531 11 122346789999999888877664321 1248999999654321
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
......|++||++.+.+++.++.++ |+++++|+||.|-.+-...-...+.....+....+
T Consensus 155 -------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------- 217 (258)
T PRK07370 155 -------IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP---------- 217 (258)
T ss_pred -------CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC----------
Confidence 1335689999999999999998775 79999999999977632100000111111111111
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..-+...+|++.+++.++...... ..|+++.+.+|.
T Consensus 218 --~~r~~~~~dva~~~~fl~s~~~~~----------~tG~~i~vdgg~ 253 (258)
T PRK07370 218 --LRRTVTQTEVGNTAAFLLSDLASG----------ITGQTIYVDAGY 253 (258)
T ss_pred --cCcCCCHHHHHHHHHHHhChhhcc----------ccCcEEEECCcc
Confidence 112667899999999988754432 334777776553
No 217
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.86 E-value=6.9e-20 Score=168.28 Aligned_cols=216 Identities=13% Similarity=0.087 Sum_probs=151.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|++|||||+|+||++++++|+++|++|++++|+.+..... . ...++.++.+|++|.+++.+++++.
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 73 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDG---L-----RQAGAQCIQADFSTNAGIMAFIDELKQHTD 73 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---H-----HHcCCEEEEcCCCCHHHHHHHHHHHHhhCC
Confidence 46899999999999999999999999999999975432111 1 1124788999999999998888765
Q ss_pred CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCC-CCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDP-QPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+++|+.++..+.+++.. .+. ..++|++||......
T Consensus 74 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~------------ 141 (236)
T PRK06483 74 GLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKG------------ 141 (236)
T ss_pred CccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccC------------
Confidence 4899999999743321 2233467899999998776665543 221 237999998654321
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
......|+.||.+.+.+++.++.++ ++++++|+||.+..+..... ..........++.. +..
T Consensus 142 ~~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~----~~~~~~~~~~~~~~------------~~~ 205 (236)
T PRK06483 142 SDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDA----AYRQKALAKSLLKI------------EPG 205 (236)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCH----HHHHHHhccCcccc------------CCC
Confidence 1335689999999999999999876 69999999999854322111 12222222222111 345
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+|++.++..++... . ..|+++.+.+|.
T Consensus 206 ~~~va~~~~~l~~~~-~-----------~~G~~i~vdgg~ 233 (236)
T PRK06483 206 EEEIIDLVDYLLTSC-Y-----------VTGRSLPVDGGR 233 (236)
T ss_pred HHHHHHHHHHHhcCC-C-----------cCCcEEEeCccc
Confidence 799999999988522 1 344788887764
No 218
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=9.6e-20 Score=170.92 Aligned_cols=229 Identities=11% Similarity=0.078 Sum_probs=155.5
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+.+|+++||||+ ++||.++++.|+++|++|++.+|+.. ..+.......+ . ..+..+++|++|.++++++++.+
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~-~--~~~~~~~~Dl~~~~~v~~~~~~~ 82 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAE-L--GAFVAGHCDVTDEASIDAVFETL 82 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHh-c--CCceEEecCCCCHHHHHHHHHHH
Confidence 4578999999997 89999999999999999998887421 11222222111 1 23567899999999999888764
Q ss_pred -----CccEEEEcccccCc-----h---hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV-----R---YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~-----~---~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|++|||||.... . ...++.+..+++|+.++..+++++..... ..++|++||.+....
T Consensus 83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~------- 155 (272)
T PRK08159 83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKV------- 155 (272)
T ss_pred HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccC-------
Confidence 58999999997532 1 11233467899999999999887765321 248999998544321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
......|++||++.+.+++.++.++ |+++++|+||.+..+........ ......... ..++
T Consensus 156 -----~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~-~~~~~~~~~-~~p~--------- 219 (272)
T PRK08159 156 -----MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDF-RYILKWNEY-NAPL--------- 219 (272)
T ss_pred -----CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcc-hHHHHHHHh-CCcc---------
Confidence 1234679999999999999998774 79999999999976421100000 001111110 1111
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.-+...+|+|++++.++...... ..|+++.+.+|.
T Consensus 220 -~r~~~peevA~~~~~L~s~~~~~----------itG~~i~vdgG~ 254 (272)
T PRK08159 220 -RRTVTIEEVGDSALYLLSDLSRG----------VTGEVHHVDSGY 254 (272)
T ss_pred -cccCCHHHHHHHHHHHhCccccC----------ccceEEEECCCc
Confidence 12567899999999998754422 344788888764
No 219
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.86 E-value=5.1e-20 Score=174.09 Aligned_cols=226 Identities=14% Similarity=0.107 Sum_probs=154.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC---------CchhhhHHHHHhhhhccCCeEEEEccCCCHHHH
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN---------NYYETSLKKARKGLLERAGVFVIDADINDKSLL 146 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v 146 (424)
.+++|+++||||+++||.++++.|+++|++|++++|+. +.......... ....++.++.+|++|.+++
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~Dv~~~~~v 79 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIV---AAGGEAVANGDDIADWDGA 79 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHH---hcCCceEEEeCCCCCHHHH
Confidence 36789999999999999999999999999999998864 21111111111 1134678899999999998
Q ss_pred HHHhhcc-----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cC-----CCCeEEEecCCc
Q 042406 147 DKIFNVV-----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SD-----PQPAIVWASSSS 208 (424)
Q Consensus 147 ~~~~~~~-----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~-----~~~~~v~~SS~~ 208 (424)
.++++.+ ++|+||||||..... ...++.+..+++|+.++.++++++.. .. ...+||++||.+
T Consensus 80 ~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~ 159 (286)
T PRK07791 80 ANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGA 159 (286)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchh
Confidence 8887654 689999999985432 12233467899999998888776642 11 113899999965
Q ss_pred ccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCce
Q 042406 209 VYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRI 285 (424)
Q Consensus 209 vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~ 285 (424)
.+... .....|+.||.+.+.+++.++.+ .|+++++|+|| +..+... ..........+
T Consensus 160 ~~~~~------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~------~~~~~~~~~~~- 219 (286)
T PRK07791 160 GLQGS------------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE------TVFAEMMAKPE- 219 (286)
T ss_pred hCcCC------------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch------hhHHHHHhcCc-
Confidence 53211 33578999999999999998876 48999999998 4332110 11111111110
Q ss_pred eEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 286 TVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 286 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.....+...+|+|.+++.++...... ..|+.+.+.+|..
T Consensus 220 ---------~~~~~~~~pedva~~~~~L~s~~~~~----------itG~~i~vdgG~~ 258 (286)
T PRK07791 220 ---------EGEFDAMAPENVSPLVVWLGSAESRD----------VTGKVFEVEGGKI 258 (286)
T ss_pred ---------ccccCCCCHHHHHHHHHHHhCchhcC----------CCCcEEEEcCCce
Confidence 01112567899999999988654321 3447888876653
No 220
>PRK06484 short chain dehydrogenase; Validated
Probab=99.86 E-value=5.1e-20 Score=188.83 Aligned_cols=227 Identities=15% Similarity=0.094 Sum_probs=161.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
...+|+++||||+|+||.+++++|+++|++|++++|+.+..+.... .. ...+.++.+|++|+++++++++..
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-----~~-~~~~~~~~~D~~~~~~~~~~~~~~~~ 339 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAE-----AL-GDEHLSVQADITDEAAVESAFAQIQA 339 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----Hh-CCceeEEEccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999996543322211 11 245678999999999999888764
Q ss_pred ---CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++.... ...+||++||.+.+..
T Consensus 340 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~------------ 407 (520)
T PRK06484 340 RWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLA------------ 407 (520)
T ss_pred HcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCC------------
Confidence 58999999997532 11223446789999999999988876542 1248999999766532
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC-cHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM-AYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
..+...|+++|++.+.+++.++.++ |+++++|+||.|.++...... ........+.+..+. .-+
T Consensus 408 ~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 475 (520)
T PRK06484 408 LPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL------------GRL 475 (520)
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC------------CCC
Confidence 1345789999999999999998765 899999999999887422100 000111122221111 125
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..++|+|++++.++...... ..|+++.+.+|.
T Consensus 476 ~~~~dia~~~~~l~s~~~~~----------~~G~~i~vdgg~ 507 (520)
T PRK06484 476 GDPEEVAEAIAFLASPAASY----------VNGATLTVDGGW 507 (520)
T ss_pred cCHHHHHHHHHHHhCccccC----------ccCcEEEECCCc
Confidence 67899999999988754321 344788887663
No 221
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.86 E-value=7.7e-20 Score=167.98 Aligned_cols=203 Identities=15% Similarity=0.125 Sum_probs=149.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+.+++|+||||+|+||++++++|+++|++|++++|+.+.......... ...+++++++|++|.+++.+++++.
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 79 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELN----NKGNVLGLAADVRDEADVQRAVDAIVAA 79 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHh----ccCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999996543322222111 1156889999999999998888754
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS---DPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+|||+||...... ..++.+..+++|+.++.++++++.+. +. +++|++||...+...
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~iv~~ss~~~~~~~----------- 147 (237)
T PRK07326 80 FGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGG-GYIINISSLAGTNFF----------- 147 (237)
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCC-eEEEEECChhhccCC-----------
Confidence 6799999998754321 12234578999999999988877543 32 389999997654321
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.....|+.+|++.+.+++.+..+ .|+++++||||.+.++...... . .. ....+
T Consensus 148 -~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-----------~----------~~--~~~~~ 203 (237)
T PRK07326 148 -AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-----------S----------EK--DAWKI 203 (237)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc-----------c----------hh--hhccC
Confidence 34567999999999999888654 4899999999999876332110 0 00 00136
Q ss_pred cHHHHHHHHHHHhhhccc
Q 042406 302 YIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~ 319 (424)
..+|++++++.++..+..
T Consensus 204 ~~~d~a~~~~~~l~~~~~ 221 (237)
T PRK07326 204 QPEDIAQLVLDLLKMPPR 221 (237)
T ss_pred CHHHHHHHHHHHHhCCcc
Confidence 789999999999987753
No 222
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=1e-19 Score=169.29 Aligned_cols=228 Identities=13% Similarity=0.075 Sum_probs=152.5
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGA--AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++|+++|||| +++||.+++++|+++|++|++.+|+... +...+...+ . ...+.++.+|++|.++++++++.+
T Consensus 4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~--~~~~~~~~~-~-~~~~~~~~~Dv~~~~~i~~~~~~~ 79 (256)
T PRK07889 4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRAL--RLTERIAKR-L-PEPAPVLELDVTNEEHLASLADRV 79 (256)
T ss_pred cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccch--hHHHHHHHh-c-CCCCcEEeCCCCCHHHHHHHHHHH
Confidence 367899999999 8999999999999999999999985421 111111111 1 135779999999999998887654
Q ss_pred -----CccEEEEcccccCc-----hhh---ccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV-----RYA---MQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~-----~~~---~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|++|||||.... ... .++.+..+++|+.++..+.+++...-. ..++|++|+.+..+
T Consensus 80 ~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~~-------- 151 (256)
T PRK07889 80 REHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATVA-------- 151 (256)
T ss_pred HHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccccc--------
Confidence 68999999998532 111 122345799999998888777654321 23788887643211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
......|++||++.+.+++.++.++ |+++++|+||.+..+..............+....+ +
T Consensus 152 -----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p--~--------- 215 (256)
T PRK07889 152 -----WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAP--L--------- 215 (256)
T ss_pred -----CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCc--c---------
Confidence 0234679999999999999998764 89999999999987632110000111111111111 1
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
.+.+...+|+|++++.++...... ..|+++.+.++
T Consensus 216 ~~~~~~p~evA~~v~~l~s~~~~~----------~tG~~i~vdgg 250 (256)
T PRK07889 216 GWDVKDPTPVARAVVALLSDWFPA----------TTGEIVHVDGG 250 (256)
T ss_pred ccccCCHHHHHHHHHHHhCccccc----------ccceEEEEcCc
Confidence 012567899999999988765432 33477777655
No 223
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.86 E-value=1.4e-19 Score=169.03 Aligned_cols=229 Identities=14% Similarity=0.092 Sum_probs=159.3
Q ss_pred CCCCCeEEEEcCCC-hhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAG-FVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.+.+|+++||||+| +||+.+++.|+++|++|++.+|+.+..+........ .....++.++++|++|.+++.++++.+
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAA-ELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHH-hcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 45689999999997 899999999999999999999876543333222211 112246889999999999999888754
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++....+++|+.++..+++++.. .+...+||++||...+..
T Consensus 93 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~--------- 163 (262)
T PRK07831 93 ERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA--------- 163 (262)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC---------
Confidence 6799999999753221 1223456888999998887776543 331238899888554321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..+...|+.+|++.+.+++.++.+ +|+++++|+||.+..|..... ........+....++ .
T Consensus 164 ---~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~-~~~~~~~~~~~~~~~------------~ 227 (262)
T PRK07831 164 ---QHGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKV-TSAELLDELAAREAF------------G 227 (262)
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccc-cCHHHHHHHHhcCCC------------C
Confidence 134568999999999999999876 489999999999998753211 111233333332221 1
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGN 340 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 340 (424)
-+...+|+|++++.++...... ..|+++.+.+
T Consensus 228 r~~~p~~va~~~~~l~s~~~~~----------itG~~i~v~~ 259 (262)
T PRK07831 228 RAAEPWEVANVIAFLASDYSSY----------LTGEVVSVSS 259 (262)
T ss_pred CCcCHHHHHHHHHHHcCchhcC----------cCCceEEeCC
Confidence 2566799999999988765422 3446777665
No 224
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.86 E-value=8.1e-20 Score=168.30 Aligned_cols=196 Identities=17% Similarity=0.141 Sum_probs=145.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--Ccc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--AFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--~~d 156 (424)
+++++||||+|+||++++++|+++|++|++++|+.+..+. ... ...++.++.+|++|.+++++++++. .+|
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~----~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d 73 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDE----LHT---QSANIFTLAFDVTDHPGTKAALSQLPFIPE 73 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH----HHH---hcCCCeEEEeeCCCHHHHHHHHHhcccCCC
Confidence 3689999999999999999999999999999996432211 111 1246889999999999999999875 479
Q ss_pred EEEEcccccCc-hh---hccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcc-cCCCCCCCCCCCCCCCCCCCh
Q 042406 157 HVMHLAAQAGV-RY---AMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSV-YGVNKKVPFSEKDRTDQPASL 230 (424)
Q Consensus 157 ~vi~~Ag~~~~-~~---~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~v-yg~~~~~~~~e~~~~~~~~~~ 230 (424)
.+|||||.... .. ..++.+..+++|+.|+.++++++.... ..+++|++||... ++. .....
T Consensus 74 ~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~-------------~~~~~ 140 (240)
T PRK06101 74 LWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL-------------PRAEA 140 (240)
T ss_pred EEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC-------------CCCch
Confidence 99999986432 11 112235689999999999999887631 1237888888543 321 34568
Q ss_pred HHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHH
Q 042406 231 YAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIV 307 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 307 (424)
|+++|++.+.+++.++.+ .|+++++++||.++++...... .. .+ ..+..+|+|
T Consensus 141 Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~------------~~--------~~----~~~~~~~~a 196 (240)
T PRK06101 141 YGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT------------FA--------MP----MIITVEQAS 196 (240)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC------------CC--------CC----cccCHHHHH
Confidence 999999999999998754 4899999999999987433110 00 00 146789999
Q ss_pred HHHHHHhhhcc
Q 042406 308 KGCLAGLDTAK 318 (424)
Q Consensus 308 ~a~~~~~~~~~ 318 (424)
+.++..++...
T Consensus 197 ~~i~~~i~~~~ 207 (240)
T PRK06101 197 QEIRAQLARGK 207 (240)
T ss_pred HHHHHHHhcCC
Confidence 99999988754
No 225
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.86 E-value=1.3e-19 Score=168.95 Aligned_cols=229 Identities=12% Similarity=0.055 Sum_probs=153.5
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGA--AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++|+++|||| +++||.+++++|+++|++|++.+|.... .+.......+ . ....++.+|++|+++++++++..
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~-~~~~~~~~~~-~--~~~~~~~~Dv~d~~~v~~~~~~~ 78 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAE-F--GSDLVFPCDVASDEQIDALFASL 78 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH-HHHHHHHHHh-c--CCcceeeccCCCHHHHHHHHHHH
Confidence 367899999996 6899999999999999999998764221 1111111111 1 22357899999999999888764
Q ss_pred -----CccEEEEcccccCch---------hhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR---------YAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~---------~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
++|++|||||..... ...++.+..+++|+.++..+.+++...- ...++|++||.+..-.
T Consensus 79 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~------ 152 (260)
T PRK06997 79 GQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERV------ 152 (260)
T ss_pred HHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccC------
Confidence 689999999975321 1122345689999999888877765432 1248999998654211
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
......|++||++.+.+++.++.++ |+++++|.||.|-.+-...-.........+.... ++
T Consensus 153 ------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~--p~-------- 216 (260)
T PRK06997 153 ------VPNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNA--PL-------- 216 (260)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcC--cc--------
Confidence 1234679999999999999998764 8999999999987652210000011111111111 11
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.-+...+|++++++.++...... ..|+++.+.++.
T Consensus 217 --~r~~~pedva~~~~~l~s~~~~~----------itG~~i~vdgg~ 251 (260)
T PRK06997 217 --RRNVTIEEVGNVAAFLLSDLASG----------VTGEITHVDSGF 251 (260)
T ss_pred --cccCCHHHHHHHHHHHhCccccC----------cceeEEEEcCCh
Confidence 12567899999999998764432 344788887664
No 226
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.86 E-value=3.6e-20 Score=174.47 Aligned_cols=192 Identities=21% Similarity=0.135 Sum_probs=147.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
....+++++|||||++||.++|++|+++|++|++.+|+.+..++....... ......+.++++|++|.++++++.+..
T Consensus 31 ~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~~ 109 (314)
T KOG1208|consen 31 IDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEFK 109 (314)
T ss_pred ccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 356779999999999999999999999999999999988766666655554 345568899999999999999988766
Q ss_pred ----CccEEEEcccccCchh--hccChHHHHHHHHHHHHHH----HHHHHhcCCCCeEEEecCCcccCCCCCCCCC-CCC
Q 042406 154 ----AFTHVMHLAAQAGVRY--AMQNPNSYVESNIAGFVNL----LETCKSSDPQPAIVWASSSSVYGVNKKVPFS-EKD 222 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~--~~~~~~~~~~~N~~g~~~l----l~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~-e~~ 222 (424)
+.|++|||||++.... ..+..|..+.+|+.|+..| ++.++.... .|||++||.......+...+. +..
T Consensus 110 ~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~-~RIV~vsS~~~~~~~~~~~l~~~~~ 188 (314)
T KOG1208|consen 110 KKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP-SRIVNVSSILGGGKIDLKDLSGEKA 188 (314)
T ss_pred hcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCC-CCEEEEcCccccCccchhhccchhc
Confidence 6799999999987654 3345689999999996554 555666665 499999997661111111222 211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRP 268 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~ 268 (424)
........|+.||.+...++.++.++. |+.++.+.||.+.++.-..
T Consensus 189 ~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r 236 (314)
T KOG1208|consen 189 KLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR 236 (314)
T ss_pred cCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec
Confidence 112233469999999999999999876 6999999999999885443
No 227
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.86 E-value=8.2e-20 Score=168.57 Aligned_cols=201 Identities=14% Similarity=0.084 Sum_probs=147.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--Ccc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--AFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--~~d 156 (424)
+|+++||||+|+||.++++.|+++|++|++++|+.+.......... .....++.++++|++|.+++++++++. ++|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d 78 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLR--ARGAVAVSTHELDILDTASHAAFLDSLPALPD 78 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHH--HhcCCeEEEEecCCCChHHHHHHHHHHhhcCC
Confidence 4789999999999999999999999999999997654333222221 123457899999999999999888764 579
Q ss_pred EEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCC
Q 042406 157 HVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPA 228 (424)
Q Consensus 157 ~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~ 228 (424)
+|||+||...... ..++....+++|+.++.++++++.. .+. ++||++||...... ....
T Consensus 79 ~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~~sS~~~~~~------------~~~~ 145 (243)
T PRK07102 79 IVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGS-GTIVGISSVAGDRG------------RASN 145 (243)
T ss_pred EEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCC-CEEEEEecccccCC------------CCCC
Confidence 9999999754321 1222346899999999988887654 344 38999998643221 0234
Q ss_pred ChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHH
Q 042406 229 SLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 305 (424)
..|+.+|++.+.+++.++.+. |+++++++||.++++.... .... . .-.+.++|
T Consensus 146 ~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~--------------~~~~-----~-----~~~~~~~~ 201 (243)
T PRK07102 146 YVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG--------------LKLP-----G-----PLTAQPEE 201 (243)
T ss_pred cccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc--------------cCCC-----c-----cccCCHHH
Confidence 679999999999999987653 8999999999999872210 0000 0 12567899
Q ss_pred HHHHHHHHhhhcc
Q 042406 306 IVKGCLAGLDTAK 318 (424)
Q Consensus 306 va~a~~~~~~~~~ 318 (424)
++++++.++++..
T Consensus 202 ~a~~i~~~~~~~~ 214 (243)
T PRK07102 202 VAKDIFRAIEKGK 214 (243)
T ss_pred HHHHHHHHHhCCC
Confidence 9999999888653
No 228
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.86 E-value=4.4e-20 Score=172.73 Aligned_cols=222 Identities=14% Similarity=0.101 Sum_probs=156.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||+++++.|+++|++|++++|+.... ...++.++.+|++|.++++++++..
T Consensus 6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (266)
T PRK06171 6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG------------QHENYQFVPTDVSSAEEVNHTVAEIIE 73 (266)
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999865421 1236789999999999999888764
Q ss_pred ---CccEEEEcccccCch-------------hhccChHHHHHHHHHHHHHHHHHHHhcC---CCCeEEEecCCcccCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR-------------YAMQNPNSYVESNIAGFVNLLETCKSSD---PQPAIVWASSSSVYGVNK 214 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~-------------~~~~~~~~~~~~N~~g~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~ 214 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.... ...+||++||...+...
T Consensus 74 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~- 152 (266)
T PRK06171 74 KFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGS- 152 (266)
T ss_pred HcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-
Confidence 679999999974321 1223345689999999999888876432 12389999997665321
Q ss_pred CCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEecccc-CCCCCCCC----------cHHHHHHHHH
Q 042406 215 KVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVY-GPWGRPDM----------AYFFFTRDII 280 (424)
Q Consensus 215 ~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~-G~~~~~~~----------~~~~~~~~~~ 280 (424)
.....|+.+|.+.+.+++.++.++ |+++++|+||.+. .+...... ....+...+.
T Consensus 153 -----------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (266)
T PRK06171 153 -----------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYT 221 (266)
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhc
Confidence 345789999999999999998764 8999999999885 22111000 0001111111
Q ss_pred cCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 281 RGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
.....+ ..-+...+|+|.++..++...... ..|+++++.+|
T Consensus 222 ~~~~~p----------~~r~~~~~eva~~~~fl~s~~~~~----------itG~~i~vdgg 262 (266)
T PRK06171 222 KTSTIP----------LGRSGKLSEVADLVCYLLSDRASY----------ITGVTTNIAGG 262 (266)
T ss_pred cccccc----------CCCCCCHHHhhhheeeeecccccc----------ceeeEEEecCc
Confidence 100111 112567899999999888654432 34478887765
No 229
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.86 E-value=6.9e-20 Score=167.04 Aligned_cols=200 Identities=18% Similarity=0.155 Sum_probs=143.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-CccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-AFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~~d~ 157 (424)
+|+++||||+|+||+++++.|+++ ++|++++|+.+.... ... ...+++++++|++|.+++.++++.. ++|+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~----~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~id~ 74 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDE----LAA---ELPGATPFPVDLTDPEAIAAAVEQLGRLDV 74 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHH----HHH---HhccceEEecCCCCHHHHHHHHHhcCCCCE
Confidence 578999999999999999999999 999999996432111 111 1136889999999999999999865 5799
Q ss_pred EEEcccccCchhh----ccChHHHHHHHHHHH----HHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCC
Q 042406 158 VMHLAAQAGVRYA----MQNPNSYVESNIAGF----VNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPAS 229 (424)
Q Consensus 158 vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~----~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~ 229 (424)
|||+||....... .++....+.+|+.+. .++++++++.+ .++|++||...++.. .+..
T Consensus 75 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~------------~~~~ 140 (227)
T PRK08219 75 LVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRAN------------PGWG 140 (227)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCcC------------CCCc
Confidence 9999998543211 122345788999984 45555555553 389999998776431 3457
Q ss_pred hHHHHHHHHHHHHHHHHHHh-C-CcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHH
Q 042406 230 LYAATKKAGEAIAHAYNHIY-G-LSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIV 307 (424)
Q Consensus 230 ~Y~~sK~~~e~~~~~~~~~~-~-i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 307 (424)
.|+.+|.+.+.+++.++.+. + +++++++||.+.++... .+...... . .....+++++|++
T Consensus 141 ~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~----------~~~~~~~~-~-------~~~~~~~~~~dva 202 (227)
T PRK08219 141 SYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQR----------GLVAQEGG-E-------YDPERYLRPETVA 202 (227)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhh----------hhhhhhcc-c-------cCCCCCCCHHHHH
Confidence 89999999999999887653 5 89999999987765221 11111000 0 1123589999999
Q ss_pred HHHHHHhhhcc
Q 042406 308 KGCLAGLDTAK 318 (424)
Q Consensus 308 ~a~~~~~~~~~ 318 (424)
++++.+++++.
T Consensus 203 ~~~~~~l~~~~ 213 (227)
T PRK08219 203 KAVRFAVDAPP 213 (227)
T ss_pred HHHHHHHcCCC
Confidence 99999997654
No 230
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.85 E-value=1.3e-19 Score=168.22 Aligned_cols=218 Identities=16% Similarity=0.078 Sum_probs=146.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
|+++||||+|+||.+++++|+++|++|++++|+.+.......... ....++.++.+|++|.+++.++++.. +
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~ 77 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEIN---QAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGG 77 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999999996443222221111 12346889999999999998887654 5
Q ss_pred ccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|+||||||..... ....+.+..+++|+.++..+++++. +.+...+||++||....... .
T Consensus 78 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~ 145 (254)
T TIGR02415 78 FDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN------------P 145 (254)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC------------C
Confidence 79999999975432 1223345789999999887766553 33333489999985543211 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEE---ecCCCCcccccc
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVY---EAPDGASVARDF 300 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 300 (424)
..+.|+.+|++.+.+++.++.++ ++++++++||.+.++... .+............- ...........+
T Consensus 146 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (254)
T TIGR02415 146 ILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWE------EIDEETSEIAGKPIGEGFEEFSSEIALGRP 219 (254)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhh------hhhhhhhhcccCchHHHHHHHHhhCCCCCC
Confidence 45789999999999999988775 799999999998765321 011000000000000 000000001127
Q ss_pred ccHHHHHHHHHHHhhhcc
Q 042406 301 TYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~ 318 (424)
..++|+++++..++....
T Consensus 220 ~~~~~~a~~~~~l~~~~~ 237 (254)
T TIGR02415 220 SEPEDVAGLVSFLASEDS 237 (254)
T ss_pred CCHHHHHHHHHhhccccc
Confidence 888999999999988764
No 231
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.85 E-value=1.6e-19 Score=169.03 Aligned_cols=226 Identities=15% Similarity=0.091 Sum_probs=148.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC-chhhhHHHHHhhhhccCCeEEEEccCCCHHHH----HHHhhcc-
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN-YYETSLKKARKGLLERAGVFVIDADINDKSLL----DKIFNVV- 153 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v----~~~~~~~- 153 (424)
++++||||+|+||++++++|+++|++|++++|... .......+... .....+.++.+|++|.+++ +++++..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~ 79 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNA--RRPNSAVTCQADLSNSATLFSRCEAIIDACF 79 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHh--ccCCceEEEEccCCCchhhHHHHHHHHHHHH
Confidence 46999999999999999999999999999876432 22221111111 1123567899999998755 3343321
Q ss_pred ----CccEEEEcccccCchhhc----c-----------ChHHHHHHHHHHHHHHHHHHHhcC---------CCCeEEEec
Q 042406 154 ----AFTHVMHLAAQAGVRYAM----Q-----------NPNSYVESNIAGFVNLLETCKSSD---------PQPAIVWAS 205 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~~~----~-----------~~~~~~~~N~~g~~~ll~a~~~~~---------~~~~~v~~S 205 (424)
++|+||||||........ . +....+++|+.++..+++++.... ...++|++|
T Consensus 80 ~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~ 159 (267)
T TIGR02685 80 RAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC 159 (267)
T ss_pred HccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence 589999999975431111 1 134679999999988887654321 112677787
Q ss_pred CCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcC
Q 042406 206 SSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRG 282 (424)
Q Consensus 206 S~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~ 282 (424)
|..... +..+...|++||++.+.+++.++.+ .|+++++|+||.+..|..... .........
T Consensus 160 s~~~~~------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~----~~~~~~~~~ 223 (267)
T TIGR02685 160 DAMTDQ------------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF----EVQEDYRRK 223 (267)
T ss_pred hhhccC------------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch----hHHHHHHHh
Confidence 754432 1144578999999999999999877 489999999999876633211 111222211
Q ss_pred CceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 283 KRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
.+ + . ..+...+|++++++.++...... ..|+.+.+.++..+
T Consensus 224 ~~--~-----~----~~~~~~~~va~~~~~l~~~~~~~----------~~G~~~~v~gg~~~ 264 (267)
T TIGR02685 224 VP--L-----G----QREASAEQIADVVIFLVSPKAKY----------ITGTCIKVDGGLSL 264 (267)
T ss_pred CC--C-----C----cCCCCHHHHHHHHHHHhCcccCC----------cccceEEECCceec
Confidence 11 1 0 11457899999999988654321 34478888776543
No 232
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.85 E-value=8.9e-20 Score=170.08 Aligned_cols=204 Identities=16% Similarity=0.141 Sum_probs=145.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||++++++|+++|++|++++|+.+...+... .....++.++++|++|.+++.++++++
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 75 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAA-----ELGAGNAWTGALDVTDRAAWDAALADFAAATG 75 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-----HhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999996543222111 112357899999999999998887643
Q ss_pred -CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcc-cCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSV-YGVNKKVPFSEKDR 223 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~v-yg~~~~~~~~e~~~ 223 (424)
++|+||||||....... .++.+..+++|+.++.++++++.+ .+. .+||++||... ++.
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~~----------- 143 (260)
T PRK08267 76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPG-ARVINTSSASAIYGQ----------- 143 (260)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CEEEEeCchhhCcCC-----------
Confidence 57999999998643221 233467899999999999887743 333 38999998644 442
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.....|+.||.+.+.+++.++.+. ++++++|+||.+..+...... ......... ...-.
T Consensus 144 --~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~--------------~~~~~ 205 (260)
T PRK08267 144 --PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS--NEVDAGSTK--------------RLGVR 205 (260)
T ss_pred --CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccccc--chhhhhhHh--------------hccCC
Confidence 234689999999999999988653 799999999998765322100 000000000 00113
Q ss_pred ccHHHHHHHHHHHhhhc
Q 042406 301 TYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~ 317 (424)
+..+|+|++++.+++..
T Consensus 206 ~~~~~va~~~~~~~~~~ 222 (260)
T PRK08267 206 LTPEDVAEAVWAAVQHP 222 (260)
T ss_pred CCHHHHHHHHHHHHhCC
Confidence 56799999999998654
No 233
>PRK08017 oxidoreductase; Provisional
Probab=99.85 E-value=7.7e-20 Score=169.99 Aligned_cols=204 Identities=21% Similarity=0.154 Sum_probs=145.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc------
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV------ 153 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~------ 153 (424)
|+|+||||+|+||.++++.|+++|++|++++|+.+..+. . ...+++++.+|++|.+++.++++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~----~-----~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~ 73 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVAR----M-----NSLGFTGILLDLDDPESVERAADEVIALTDN 73 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHH----H-----HhCCCeEEEeecCCHHHHHHHHHHHHHhcCC
Confidence 579999999999999999999999999999996532211 1 1135788999999999887776543
Q ss_pred CccEEEEcccccCchh----hccChHHHHHHHHHHHHHH----HHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNL----LETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~l----l~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
.+|.+||+||...... ..++.+..+++|+.|+.++ ++.+++.+.+ ++|++||...+.. .
T Consensus 74 ~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~-~iv~~ss~~~~~~------------~ 140 (256)
T PRK08017 74 RLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEG-RIVMTSSVMGLIS------------T 140 (256)
T ss_pred CCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCC-EEEEEcCcccccC------------C
Confidence 4699999999743221 2223457899999998775 6666666654 8999999644321 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCC-ceeEEecCCCCccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGK-RITVYEAPDGASVARDFT 301 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i 301 (424)
.....|+.+|++.|.+.+.++.. .++++++++||.+.++... .+.... ..... ..+...+.++
T Consensus 141 ~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~----------~~~~~~~~~~~~---~~~~~~~~~~ 207 (256)
T PRK08017 141 PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTD----------NVNQTQSDKPVE---NPGIAARFTL 207 (256)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhh----------cccchhhccchh---hhHHHhhcCC
Confidence 34578999999999988876543 4899999999887654221 111111 11111 1223345689
Q ss_pred cHHHHHHHHHHHhhhcc
Q 042406 302 YIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~ 318 (424)
+++|+++++..++++..
T Consensus 208 ~~~d~a~~~~~~~~~~~ 224 (256)
T PRK08017 208 GPEAVVPKLRHALESPK 224 (256)
T ss_pred CHHHHHHHHHHHHhCCC
Confidence 99999999999997765
No 234
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.85 E-value=3.6e-19 Score=167.22 Aligned_cols=212 Identities=14% Similarity=0.176 Sum_probs=148.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhh---HHHHHhhh-hccCCeEEEEccCCCHHHHHHHhh
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS---LKKARKGL-LERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
++.+|+++||||+|+||.++++.|+++|++|++++|+.+..... ........ ....++.++.+|++|.+++.++++
T Consensus 3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~ 82 (273)
T PRK08278 3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA 82 (273)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 45788999999999999999999999999999999976432111 11111111 123468899999999999998887
Q ss_pred cc-----CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEecCCcccCCCCCCCCC
Q 042406 152 VV-----AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKSS---DPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 152 ~~-----~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
.. ++|+||||||....... .++.+..+++|+.++.++++++... ....++|++||.......
T Consensus 83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------ 156 (273)
T PRK08278 83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK------ 156 (273)
T ss_pred HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc------
Confidence 65 68999999997543222 2234668999999999999888642 112388999885322110
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEecc-ccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFT-VYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
...+...|+.||.+.|.+++.++.++ ++++++|+||. +-.+ ....+..+. .
T Consensus 157 ----~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~----------~~~~~~~~~-----------~ 211 (273)
T PRK08278 157 ----WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA----------AVRNLLGGD-----------E 211 (273)
T ss_pred ----ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH----------HHHhccccc-----------c
Confidence 01345789999999999999998775 89999999984 4332 111111111 0
Q ss_pred cccccccHHHHHHHHHHHhhhcc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
....+...+|+|++++.++....
T Consensus 212 ~~~~~~~p~~va~~~~~l~~~~~ 234 (273)
T PRK08278 212 AMRRSRTPEIMADAAYEILSRPA 234 (273)
T ss_pred cccccCCHHHHHHHHHHHhcCcc
Confidence 11135678999999999887654
No 235
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.85 E-value=2.5e-19 Score=164.95 Aligned_cols=206 Identities=14% Similarity=0.089 Sum_probs=144.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC--HHHHHHHhhc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND--KSLLDKIFNV- 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~v~~~~~~- 152 (424)
.+++|+++||||+|+||.+++++|+++|++|++++|+.+........... .....+.++.+|++| .+++.++++.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~i 80 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVE--AGHPEPFAIRFDLMSAEEKEFEQFAATI 80 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHH--cCCCCcceEEeeecccchHHHHHHHHHH
Confidence 46789999999999999999999999999999999976543332222211 122356788999976 3455544431
Q ss_pred -----cCccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCC
Q 042406 153 -----VAFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 153 -----~~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
.++|+||||||.... ....++....+++|+.|+.++++++.+ .+. .++|++||.....
T Consensus 81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~-~~iv~~ss~~~~~------- 152 (239)
T PRK08703 81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPD-ASVIFVGESHGET------- 152 (239)
T ss_pred HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCC-CEEEEEecccccc-------
Confidence 157999999997432 111223356899999998888777643 333 4899999854321
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY----GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
+......|+.||++.+.+++.++.++ ++++++|+||.|++|..... ..+
T Consensus 153 -----~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~----------~~~------------ 205 (239)
T PRK08703 153 -----PKAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS----------HPG------------ 205 (239)
T ss_pred -----CCCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc----------CCC------------
Confidence 11344679999999999999998775 59999999999999843210 001
Q ss_pred ccccccccHHHHHHHHHHHhhhcc
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
.....+...+|++.+++.++....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~ 229 (239)
T PRK08703 206 EAKSERKSYGDVLPAFVWWASAES 229 (239)
T ss_pred CCccccCCHHHHHHHHHHHhCccc
Confidence 001124678999999999887543
No 236
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.85 E-value=4.5e-19 Score=163.27 Aligned_cols=223 Identities=13% Similarity=0.043 Sum_probs=152.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc-hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
|++|||||+|+||+++++.|+++|++|+++.|.... ........ .....++.++.+|++|.+++.++++..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 77 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQ---GALGFDFRVVEGDVSSFESCKAAVAKVEAELG 77 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH---HhhCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 579999999999999999999999999999883221 11111111 112346889999999999998887654
Q ss_pred CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||..... ...++.+..+++|+.++..+++ .+++.+.+ +||++||.......
T Consensus 78 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~iss~~~~~~~------------ 144 (242)
T TIGR01829 78 PIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWG-RIINISSVNGQKGQ------------ 144 (242)
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEcchhhcCCC------------
Confidence 579999999975421 1223346688999999777544 44555554 89999996443211
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.....|+.+|.+.+.+++.++++. +++++.++||.+.++.... ....+...+....+.. .+..
T Consensus 145 ~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~--~~~~~~~~~~~~~~~~------------~~~~ 210 (242)
T TIGR01829 145 FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMA--MREDVLNSIVAQIPVG------------RLGR 210 (242)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccc--cchHHHHHHHhcCCCC------------CCcC
Confidence 334679999999999998887653 8999999999999875421 1122333333322211 1445
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+|++.++..++..+... ..|+.+.+.++.
T Consensus 211 ~~~~a~~~~~l~~~~~~~----------~~G~~~~~~gg~ 240 (242)
T TIGR01829 211 PEEIAAAVAFLASEEAGY----------ITGATLSINGGL 240 (242)
T ss_pred HHHHHHHHHHHcCchhcC----------ccCCEEEecCCc
Confidence 689999988777554321 344788888764
No 237
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.85 E-value=3e-19 Score=167.92 Aligned_cols=234 Identities=17% Similarity=0.119 Sum_probs=153.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----C
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----A 154 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----~ 154 (424)
+|+++|||| |+||+++++.|+ +|++|++++|+.+........... ...++.++.+|++|.+++.++++.. +
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~ 76 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLRE---AGFDVSTQEVDVSSRESVKALAATAQTLGP 76 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEeecCCHHHHHHHHHHHHhcCC
Confidence 467999998 799999999996 899999999975433322222111 1246889999999999999888753 5
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCC-----CCC---CCCCC---
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNK-----KVP---FSEKD--- 222 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~-----~~~---~~e~~--- 222 (424)
+|+||||||.... ..+++..+++|+.|+.++++++.... .+.++|++||.+...... ... ++..+
T Consensus 77 id~li~nAG~~~~---~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (275)
T PRK06940 77 VTGLVHTAGVSPS---QASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLS 153 (275)
T ss_pred CCEEEECCCcCCc---hhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccc
Confidence 8999999997532 34578899999999999988876531 112567777754432110 000 00000
Q ss_pred -----C--CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC--CcHHHHHHHHHcCCceeEEec
Q 042406 223 -----R--TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD--MAYFFFTRDIIRGKRITVYEA 290 (424)
Q Consensus 223 -----~--~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 290 (424)
+ ...+...|++||++.+.+++.++.++ |+++++|+||.+.++..... .........+....+
T Consensus 154 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------ 227 (275)
T PRK06940 154 LPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSP------ 227 (275)
T ss_pred cccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCC------
Confidence 0 00235789999999999999988764 79999999999987732110 000011112211111
Q ss_pred CCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 291 PDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 291 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..-+...+|+|++++.++...... ..|+++.+.+|.
T Consensus 228 ------~~r~~~peeia~~~~fL~s~~~~~----------itG~~i~vdgg~ 263 (275)
T PRK06940 228 ------AGRPGTPDEIAALAEFLMGPRGSF----------ITGSDFLVDGGA 263 (275)
T ss_pred ------cccCCCHHHHHHHHHHHcCcccCc----------ccCceEEEcCCe
Confidence 112677899999999888654322 334778777664
No 238
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.84 E-value=7.6e-20 Score=170.77 Aligned_cols=227 Identities=12% Similarity=0.116 Sum_probs=153.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||++++++|+++|++|++++|+.+..+. ... ....++.++.+|++|.+++.+++++.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQE----LEA--AHGDAVVGVEGDVRSLDDHKEAVARCVAA 76 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHh--hcCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999996543222 111 11246889999999999988887754
Q ss_pred --CccEEEEcccccCch--h---hc----cChHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVR--Y---AM----QNPNSYVESNIAGFVNLLETCKSSD--PQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~--~---~~----~~~~~~~~~N~~g~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||..... . .. ++.+..+++|+.++.++++++.+.. .+.++|++||...+..
T Consensus 77 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~-------- 148 (262)
T TIGR03325 77 FGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYP-------- 148 (262)
T ss_pred hCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecC--------
Confidence 689999999974211 0 11 1245789999999999988876532 1236888887654321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCc-H-H----HH-HHHHHcCCceeEEecC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMA-Y-F----FF-TRDIIRGKRITVYEAP 291 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~-~-~----~~-~~~~~~~~~~~~~~~~ 291 (424)
......|+.+|.+.+.+++.++.++ ++++++|+||.+..+-...... . . .+ ....... .++
T Consensus 149 ----~~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p----- 218 (262)
T TIGR03325 149 ----NGGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-VLP----- 218 (262)
T ss_pred ----CCCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-cCC-----
Confidence 1234679999999999999999875 4899999999998763221100 0 0 00 0111111 011
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
..-+...+|+|.+++.++....... ..|+++.+.+|
T Consensus 219 -----~~r~~~p~eva~~~~~l~s~~~~~~---------~tG~~i~vdgg 254 (262)
T TIGR03325 219 -----IGRMPDAEEYTGAYVFFATRGDTVP---------ATGAVLNYDGG 254 (262)
T ss_pred -----CCCCCChHHhhhheeeeecCCCccc---------ccceEEEecCC
Confidence 1125678999999988776532110 23477877765
No 239
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.84 E-value=5.1e-19 Score=162.78 Aligned_cols=205 Identities=14% Similarity=0.107 Sum_probs=145.2
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch-hhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----Cc
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY-ETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----AF 155 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~~ 155 (424)
|+||||+|+||.++++.|+++|++|++++|..+.. ......... ...++.++.+|++|.+++.++++.. ++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 77 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQA---QGGNARLLQFDVADRVACRTLLEADIAEHGAY 77 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHH---cCCeEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999999998754322 111111111 2346899999999999998887753 57
Q ss_pred cEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH-----hcCCCCeEEEecCCcc-cCCCCCCCCCCCCCCC
Q 042406 156 THVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK-----SSDPQPAIVWASSSSV-YGVNKKVPFSEKDRTD 225 (424)
Q Consensus 156 d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~-----~~~~~~~~v~~SS~~v-yg~~~~~~~~e~~~~~ 225 (424)
|++|||||..... ...++++..+++|+.++.++++++. +.+. ++||++||.+. ++.
T Consensus 78 ~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~iv~vsS~~~~~~~------------- 143 (239)
T TIGR01831 78 YGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQG-GRIITLASVSGVMGN------------- 143 (239)
T ss_pred CEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCC-eEEEEEcchhhccCC-------------
Confidence 9999999975432 1233456799999999999888652 2333 38999999654 332
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.....|+.+|++.+.+++.++.++ |++++.++||.+.++..... . .........-++ .-+..
T Consensus 144 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~-~~~~~~~~~~~~------------~~~~~ 208 (239)
T TIGR01831 144 RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV--E-HDLDEALKTVPM------------NRMGQ 208 (239)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh--h-HHHHHHHhcCCC------------CCCCC
Confidence 334689999999999999887664 89999999999988743311 1 111222221111 12456
Q ss_pred HHHHHHHHHHHhhhcc
Q 042406 303 IDDIVKGCLAGLDTAK 318 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~ 318 (424)
.+|++++++.++....
T Consensus 209 ~~~va~~~~~l~~~~~ 224 (239)
T TIGR01831 209 PAEVASLAGFLMSDGA 224 (239)
T ss_pred HHHHHHHHHHHcCchh
Confidence 7999999999987654
No 240
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.84 E-value=6.3e-19 Score=164.25 Aligned_cols=229 Identities=13% Similarity=0.031 Sum_probs=156.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-Cc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-AF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~~ 155 (424)
+++|+++||||+|+||+++++.|+++|++|++++|+.+........... ....++.++.+|++|.+++.++++.. ++
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 82 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRA--AHGVDVAVHALDLSSPEAREQLAAEAGDI 82 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHh--hcCCceEEEEecCCCHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999999975433322221111 12346889999999999999988765 68
Q ss_pred cEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCC
Q 042406 156 THVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 156 d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~ 227 (424)
|++|||||..... ...++.+..+++|+.+..++++++ ++.+.+ ++|++||..... +...
T Consensus 83 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~iss~~~~~------------~~~~ 149 (259)
T PRK06125 83 DILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSG-VIVNVIGAAGEN------------PDAD 149 (259)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc-EEEEecCccccC------------CCCC
Confidence 9999999975321 122334678999999988777765 333333 899998854421 1133
Q ss_pred CChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC-------Cc-HHHHHHHHHcCCceeEEecCCCCcc
Q 042406 228 ASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD-------MA-YFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
...|+++|.+.+.+++.++.+. |++++.|+||.+..+....- .+ .......+... .+
T Consensus 150 ~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---------- 217 (259)
T PRK06125 150 YICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAG--LP---------- 217 (259)
T ss_pred chHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhcc--CC----------
Confidence 4679999999999999987653 89999999999987621100 00 00000111110 00
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+..++|+|++++.++...... .+|..+.+.+|.
T Consensus 218 ~~~~~~~~~va~~~~~l~~~~~~~----------~~G~~i~vdgg~ 253 (259)
T PRK06125 218 LGRPATPEEVADLVAFLASPRSGY----------TSGTVVTVDGGI 253 (259)
T ss_pred cCCCcCHHHHHHHHHHHcCchhcc----------ccCceEEecCCe
Confidence 112668899999999887654322 344788887664
No 241
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.83 E-value=4.1e-19 Score=165.19 Aligned_cols=215 Identities=16% Similarity=0.137 Sum_probs=144.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+||||||+|+||++++++|+++|++|++++|+.+.......... ....++.++.+|++|.+++.+++.. ++|+|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~-~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAA---RRGLALRVEKLDLTDAIDRAQAAEW-DVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH---hcCCcceEEEeeCCCHHHHHHHhcC-CCCEE
Confidence 4689999999999999999999999999999996433222111111 1234688999999999999988764 57999
Q ss_pred EEcccccCchhh----ccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCCh
Q 042406 159 MHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL 230 (424)
Q Consensus 159 i~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~ 230 (424)
|||||....... .++.+..+++|+.++.++.+ .+++.+.+ +||++||...+... .....
T Consensus 78 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~~SS~~~~~~~------------~~~~~ 144 (257)
T PRK09291 78 LNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKG-KVVFTSSMAGLITG------------PFTGA 144 (257)
T ss_pred EECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-eEEEEcChhhccCC------------CCcch
Confidence 999997543221 22335678899998766554 44555654 99999996543211 23578
Q ss_pred HHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcC-Cc-eeEEecCCCCccccccccHHH
Q 042406 231 YAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRG-KR-ITVYEAPDGASVARDFTYIDD 305 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~i~v~D 305 (424)
|+.||.+.|.+++.+..+ .|+++++||||.+..+.... . ...+. ..... .. +.. .......+++..+|
T Consensus 145 Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~-~-~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~ 217 (257)
T PRK09291 145 YCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDT-M-AETPK-RWYDPARNFTDP----EDLAFPLEQFDPQE 217 (257)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhh-h-hhhhh-hhcchhhHHHhh----hhhhccccCCCHHH
Confidence 999999999999888765 48999999999875442210 0 00000 00000 00 110 01122334678999
Q ss_pred HHHHHHHHhhhc
Q 042406 306 IVKGCLAGLDTA 317 (424)
Q Consensus 306 va~a~~~~~~~~ 317 (424)
+++.++.++..+
T Consensus 218 ~~~~~~~~l~~~ 229 (257)
T PRK09291 218 MIDAMVEVIPAD 229 (257)
T ss_pred HHHHHHHHhcCC
Confidence 999988887654
No 242
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=99.83 E-value=8.5e-19 Score=162.84 Aligned_cols=238 Identities=14% Similarity=0.107 Sum_probs=166.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+.++.+|+++||||+.+||++++++|++.|++|++.+|+.+..+..............++..+.||+++.+.++++++..
T Consensus 3 ~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~ 82 (270)
T KOG0725|consen 3 GGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFA 82 (270)
T ss_pred CccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999887766655554444444567999999999988776665533
Q ss_pred ------CccEEEEcccccCch-----hhccChHHHHHHHHHH-HHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCC
Q 042406 154 ------AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAG-FVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVP 217 (424)
Q Consensus 154 ------~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g-~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~ 217 (424)
++|++|||||..... ...+.++..+++|+.| +.++..++. +.+. ..++++||...+....
T Consensus 83 ~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~g-g~I~~~ss~~~~~~~~--- 158 (270)
T KOG0725|consen 83 VEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKG-GSIVNISSVAGVGPGP--- 158 (270)
T ss_pred HHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCC-ceEEEEeccccccCCC---
Confidence 689999999986533 2344456799999996 555555443 3233 3888888876654311
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC---CcHHHHHHHHHcCCceeEEecC
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD---MAYFFFTRDIIRGKRITVYEAP 291 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 291 (424)
.+...|+.+|.+.+++.+.++.++ |+|+.+|.||.|..+..... .....+.+.......++
T Consensus 159 --------~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p----- 225 (270)
T KOG0725|consen 159 --------GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVP----- 225 (270)
T ss_pred --------CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccc-----
Confidence 111789999999999999998765 89999999999998751100 00111211110111111
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.-.+...+|++.++..++..... . ..|+.+.+.+|..
T Consensus 226 -----~gr~g~~~eva~~~~fla~~~as-y---------itG~~i~vdgG~~ 262 (270)
T KOG0725|consen 226 -----LGRVGTPEEVAEAAAFLASDDAS-Y---------ITGQTIIVDGGFT 262 (270)
T ss_pred -----cCCccCHHHHHHhHHhhcCcccc-c---------ccCCEEEEeCCEE
Confidence 11266789999999988777543 2 3346777766543
No 243
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.83 E-value=7.6e-20 Score=167.75 Aligned_cols=227 Identities=22% Similarity=0.187 Sum_probs=157.4
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEEc
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHL 161 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~~ 161 (424)
|+|+||+|.+|+.+++.|++.+++|+++.|+.+. .....+...+++++.+|+.|.+++.++|+++ |.||++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~-------~~~~~l~~~g~~vv~~d~~~~~~l~~al~g~--d~v~~~ 71 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS-------DRAQQLQALGAEVVEADYDDPESLVAALKGV--DAVFSV 71 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH-------HHHHHHHHTTTEEEES-TT-HHHHHHHHTTC--SEEEEE
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch-------hhhhhhhcccceEeecccCCHHHHHHHHcCC--ceEEee
Confidence 7999999999999999999999999999997621 1122233457899999999999999999988 999998
Q ss_pred ccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH
Q 042406 162 AAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAI 241 (424)
Q Consensus 162 Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~ 241 (424)
.+.... .......+++++|++.+++ +||+.|....+.... ...|....-..|...|..
T Consensus 72 ~~~~~~------------~~~~~~~~li~Aa~~agVk-~~v~ss~~~~~~~~~---------~~~p~~~~~~~k~~ie~~ 129 (233)
T PF05368_consen 72 TPPSHP------------SELEQQKNLIDAAKAAGVK-HFVPSSFGADYDESS---------GSEPEIPHFDQKAEIEEY 129 (233)
T ss_dssp SSCSCC------------CHHHHHHHHHHHHHHHT-S-EEEESEESSGTTTTT---------TSTTHHHHHHHHHHHHHH
T ss_pred cCcchh------------hhhhhhhhHHHhhhccccc-eEEEEEecccccccc---------cccccchhhhhhhhhhhh
Confidence 875321 1234567899999999986 888655444432110 002223344577777776
Q ss_pred HHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHH--HHHcCC-ceeEEecCCCCccccccc-cHHHHHHHHHHHhhhc
Q 042406 242 AHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTR--DIIRGK-RITVYEAPDGASVARDFT-YIDDIVKGCLAGLDTA 317 (424)
Q Consensus 242 ~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~i-~v~Dva~a~~~~~~~~ 317 (424)
+++. ++++++||||..+..... .+.. ...... .+.++ ++++....++ +.+|+++++..++..+
T Consensus 130 l~~~----~i~~t~i~~g~f~e~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Dvg~~va~il~~p 196 (233)
T PF05368_consen 130 LRES----GIPYTIIRPGFFMENLLP------PFAPVVDIKKSKDVVTLP---GPGNQKAVPVTDTRDVGRAVAAILLDP 196 (233)
T ss_dssp HHHC----TSEBEEEEE-EEHHHHHT------TTHHTTCSCCTSSEEEEE---TTSTSEEEEEEHHHHHHHHHHHHHHSG
T ss_pred hhhc----cccceeccccchhhhhhh------hhcccccccccceEEEEc---cCCCccccccccHHHHHHHHHHHHcCh
Confidence 6554 999999999987753111 0111 011111 23333 4556555664 9999999999999987
Q ss_pred cccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccc
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~ 363 (424)
... ..++.+.+++ +.+|++|+++.+++.+|+++++
T Consensus 197 ~~~----------~~~~~~~~~~-~~~t~~eia~~~s~~~G~~v~y 231 (233)
T PF05368_consen 197 EKH----------NNGKTIFLAG-ETLTYNEIAAILSKVLGKKVKY 231 (233)
T ss_dssp GGT----------TEEEEEEEGG-GEEEHHHHHHHHHHHHTSEEEE
T ss_pred HHh----------cCCEEEEeCC-CCCCHHHHHHHHHHHHCCccEE
Confidence 653 1347888875 7799999999999999998765
No 244
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.83 E-value=3.5e-19 Score=162.13 Aligned_cols=203 Identities=15% Similarity=0.132 Sum_probs=146.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--CccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--AFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--~~d~ 157 (424)
|+++||||+|+||+++++.|+++|++|++++|+.+...... .+ .++.++++|++|.++++++++.. ++|+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~----~~----~~~~~~~~D~~~~~~v~~~~~~~~~~id~ 72 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAA----KE----LDVDAIVCDNTDPASLEEARGLFPHHLDT 72 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----Hh----ccCcEEecCCCCHHHHHHHHHHHhhcCcE
Confidence 47999999999999999999999999999999654322111 11 14678899999999999988754 5799
Q ss_pred EEEcccccCc-------hh--hccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCC
Q 042406 158 VMHLAAQAGV-------RY--AMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 158 vi~~Ag~~~~-------~~--~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~ 227 (424)
+|||||.... .. ..++.+..+++|+.++.++++++.... ...+||++||... ..
T Consensus 73 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~----------------~~ 136 (223)
T PRK05884 73 IVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP----------------PA 136 (223)
T ss_pred EEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC----------------CC
Confidence 9999985211 01 123446789999999998888875431 1248999998541 23
Q ss_pred CChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHH
Q 042406 228 ASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYID 304 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 304 (424)
...|++||++.+.+++.++.++ |+++++|.||.+..+.. ... . . .+ .-..+
T Consensus 137 ~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~----------~~~-~--~--------~p-----~~~~~ 190 (223)
T PRK05884 137 GSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGY----------DGL-S--R--------TP-----PPVAA 190 (223)
T ss_pred ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh----------hhc-c--C--------CC-----CCCHH
Confidence 4679999999999999998764 89999999999875511 000 0 0 00 12679
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 305 Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
|++++++.++...... ..|+++.+.+|.
T Consensus 191 ~ia~~~~~l~s~~~~~----------v~G~~i~vdgg~ 218 (223)
T PRK05884 191 EIARLALFLTTPAARH----------ITGQTLHVSHGA 218 (223)
T ss_pred HHHHHHHHHcCchhhc----------cCCcEEEeCCCe
Confidence 9999999887654432 344777776654
No 245
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.83 E-value=3.1e-19 Score=167.75 Aligned_cols=165 Identities=20% Similarity=0.217 Sum_probs=127.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||++++++|+++|++|++++|+.+.... ....++.++.+|++|.+++.++++.+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 71 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA---------LAAAGFTAVQLDVNDGAALARLAEELEAEHG 71 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH---------HHHCCCeEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999996432111 11235788999999999998888765
Q ss_pred CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh---cCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS---SDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~---~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.. .+. .++|++||...+... .
T Consensus 72 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~------------~ 138 (274)
T PRK05693 72 GLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSR-GLVVNIGSVSGVLVT------------P 138 (274)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CEEEEECCccccCCC------------C
Confidence 6899999999754322 2233457899999999888887643 222 379999986554321 2
Q ss_pred CCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCC
Q 042406 227 PASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPW 265 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~ 265 (424)
....|+.+|.+.+.+++.++.+ .|+++++++||.|.++.
T Consensus 139 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 139 FAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCcccccc
Confidence 3478999999999999988765 48999999999998763
No 246
>PRK05855 short chain dehydrogenase; Validated
Probab=99.83 E-value=3.3e-19 Score=185.25 Aligned_cols=175 Identities=19% Similarity=0.176 Sum_probs=136.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
....+++++||||+|+||++++++|+++|++|++++|+.+..+......+. ...++.++.+|++|.+++.++++++
T Consensus 311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~ 387 (582)
T PRK05855 311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRA---AGAVAHAYRVDVSDADAMEAFAEWVR 387 (582)
T ss_pred ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999976443332222211 1346889999999999999988765
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+...+||++||.+.|...
T Consensus 388 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------- 459 (582)
T PRK05855 388 AEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS-------- 459 (582)
T ss_pred HhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC--------
Confidence 5899999999864322 223345789999999988877653 33333489999998887632
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGP 264 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~ 264 (424)
.+...|++||++.+.+++.++.+. |+++++|+||.|-.+
T Consensus 460 ----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 460 ----RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred ----CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCccc
Confidence 345789999999999999988664 899999999999765
No 247
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.83 E-value=8.5e-19 Score=164.61 Aligned_cols=211 Identities=17% Similarity=0.117 Sum_probs=145.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
|+++||||+|+||.+++++|+++|++|++++|+.+..+........ .....+.++.+|++|.+++.++++++ +
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 78 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARA--LGGTVPEHRALDISDYDAVAAFAADIHAAHGS 78 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCCcceEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 5799999999999999999999999999999865433222222111 12233567899999999988887764 5
Q ss_pred ccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|+||||||...... ..++.+..+++|+.++.++++++.. .+...+||++||...+.. ..
T Consensus 79 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~------------~~ 146 (272)
T PRK07832 79 MDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA------------LP 146 (272)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC------------CC
Confidence 799999999754321 2233467899999999999888643 222248999999654321 12
Q ss_pred CCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCc-----HHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 227 PASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMA-----YFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
....|+.+|.+.+.+.+.++.+ .++++++|+||.+.++....... .......... ....
T Consensus 147 ~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 213 (272)
T PRK07832 147 WHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-------------RFRG 213 (272)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-------------hccc
Confidence 3467999999999988888754 48999999999999874321000 0000000000 0011
Q ss_pred ccccHHHHHHHHHHHhhhc
Q 042406 299 DFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~ 317 (424)
..+..+|+|++++.++++.
T Consensus 214 ~~~~~~~vA~~~~~~~~~~ 232 (272)
T PRK07832 214 HAVTPEKAAEKILAGVEKN 232 (272)
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 2578999999999999643
No 248
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.83 E-value=6.7e-19 Score=168.76 Aligned_cols=201 Identities=14% Similarity=0.150 Sum_probs=141.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC--HHHHHHHh---hc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND--KSLLDKIF---NV 152 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~v~~~~---~~ 152 (424)
.|++++||||+|+||++++++|+++|++|++++|+.+..+....+... ......+..+.+|+++ .+.++++. .+
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~-~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS-KYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHH-HCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999987654443332221 1122467888999985 34444433 33
Q ss_pred cCccEEEEcccccCc--hh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 153 VAFTHVMHLAAQAGV--RY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 153 ~~~d~vi~~Ag~~~~--~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
.++|++|||||.... .. ..++.+..+++|+.|+.++.+++. +.+.+ +||++||...+...
T Consensus 131 ~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g-~IV~iSS~a~~~~~--------- 200 (320)
T PLN02780 131 LDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKG-AIINIGSGAAIVIP--------- 200 (320)
T ss_pred CCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCc-EEEEEechhhccCC---------
Confidence 456799999998532 11 122335689999999888777654 34443 89999997664210
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.......|++||++.+.+.+.++.++ |+++++++||.|-.+-... ... . .-
T Consensus 201 -~~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~------------~~~-----------~--~~ 254 (320)
T PLN02780 201 -SDPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI------------RRS-----------S--FL 254 (320)
T ss_pred -CCccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc------------cCC-----------C--CC
Confidence 00235789999999999999998775 8999999999997662210 000 0 01
Q ss_pred cccHHHHHHHHHHHhh
Q 042406 300 FTYIDDIVKGCLAGLD 315 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~ 315 (424)
....+++|+.++..+.
T Consensus 255 ~~~p~~~A~~~~~~~~ 270 (320)
T PLN02780 255 VPSSDGYARAALRWVG 270 (320)
T ss_pred CCCHHHHHHHHHHHhC
Confidence 3467999999998885
No 249
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.83 E-value=9.3e-19 Score=163.49 Aligned_cols=206 Identities=14% Similarity=0.110 Sum_probs=147.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++++++||||+|+||.+++++|+++|++|++++|+.+......... ....++.++.+|++|.+++.++++..
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~~~~~~ 78 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL----PYPGRHRWVVADLTSEAGREAVLARAREM 78 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH----hcCCceEEEEccCCCHHHHHHHHHHHHhc
Confidence 46789999999999999999999999999999999754332222111 12357899999999999988887654
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.+ .+. +++|++||...+...
T Consensus 79 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~~----------- 146 (263)
T PRK09072 79 GGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPS-AMVVNVGSTFGSIGY----------- 146 (263)
T ss_pred CCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCC-CEEEEecChhhCcCC-----------
Confidence 5799999999754321 1223356889999999988887754 232 378888885443211
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.....|+.+|.+.+.+++.++.++ +++++++.||.+.++.... .. . . .. ........
T Consensus 147 -~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~----------~~-~-~--~~-----~~~~~~~~ 206 (263)
T PRK09072 147 -PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSE----------AV-Q-A--LN-----RALGNAMD 206 (263)
T ss_pred -CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhh----------hc-c-c--cc-----ccccCCCC
Confidence 234779999999999999988764 7999999999887653210 00 0 0 00 00011356
Q ss_pred cHHHHHHHHHHHhhhcc
Q 042406 302 YIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~ 318 (424)
.++|+|++++.++++..
T Consensus 207 ~~~~va~~i~~~~~~~~ 223 (263)
T PRK09072 207 DPEDVAAAVLQAIEKER 223 (263)
T ss_pred CHHHHHHHHHHHHhCCC
Confidence 78999999999998653
No 250
>PRK05599 hypothetical protein; Provisional
Probab=99.83 E-value=1.2e-18 Score=161.18 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=141.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
|+++||||+++||.+++++|+ +|++|++++|+.+..+......+. .....+.++++|++|.++++++++.. +
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 77 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQ--RGATSVHVLSFDAQDLDTHRELVKQTQELAGE 77 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHh--ccCCceEEEEcccCCHHHHHHHHHHHHHhcCC
Confidence 679999999999999999999 599999999976654443332221 12235789999999999998887654 6
Q ss_pred ccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHH----HHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLL----ETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll----~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|++|||||....... ..+....+.+|+.+...++ +.+.+.+...+||++||...+-. ..
T Consensus 78 id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~------------~~ 145 (246)
T PRK05599 78 ISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRA------------RR 145 (246)
T ss_pred CCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccC------------Cc
Confidence 8999999998543211 1122356778888876554 44444332248999999655421 12
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
....|+.+|++.+.+++.++.+. |++++++.||.|.++.... ..+.. -....
T Consensus 146 ~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~-------------~~~~~------------~~~~p 200 (246)
T PRK05599 146 ANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTG-------------MKPAP------------MSVYP 200 (246)
T ss_pred CCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcC-------------CCCCC------------CCCCH
Confidence 35689999999999999998764 7999999999998752110 00000 02467
Q ss_pred HHHHHHHHHHhhhcc
Q 042406 304 DDIVKGCLAGLDTAK 318 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~ 318 (424)
+|+|++++.++.+..
T Consensus 201 e~~a~~~~~~~~~~~ 215 (246)
T PRK05599 201 RDVAAAVVSAITSSK 215 (246)
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999988754
No 251
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=99.83 E-value=2.8e-19 Score=150.56 Aligned_cols=224 Identities=13% Similarity=0.056 Sum_probs=164.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+..+.++||||+++||+++++.|+++|++|.+.+++....++... ......+-..+.||++++.+++..+++.
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~----~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAG----DLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHh----hcCCCCccceeeeccCcHHHHHHHHHHHHHh
Confidence 456789999999999999999999999999999997654333222 1122245678899999999998877765
Q ss_pred --CccEEEEcccccCc----hhhccChHHHHHHHHHHHHHHHHHHHhc----CCC-CeEEEecCC-cccCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGV----RYAMQNPNSYVESNIAGFVNLLETCKSS----DPQ-PAIVWASSS-SVYGVNKKVPFSEK 221 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~-~~~v~~SS~-~vyg~~~~~~~~e~ 221 (424)
.|++|+||||+... +...++.+..+.+|+.|++.+.+++.+. +.. -+||++||. +-.|.
T Consensus 88 ~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN--------- 158 (256)
T KOG1200|consen 88 LGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN--------- 158 (256)
T ss_pred cCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc---------
Confidence 69999999999653 3345567889999999998887776443 111 289999993 22232
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..++.|+++|.-...+.+.++++. ++|+..|.||.|-.|-.. ...+.+++.+..+-|...+
T Consensus 159 ----~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~--~mp~~v~~ki~~~iPmgr~---------- 222 (256)
T KOG1200|consen 159 ----FGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTE--AMPPKVLDKILGMIPMGRL---------- 222 (256)
T ss_pred ----ccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhh--hcCHHHHHHHHccCCcccc----------
Confidence 446889999988877777766653 899999999999887442 2345677788877766553
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
-..+|+|..++.+....... ..|..+.+.+|
T Consensus 223 --G~~EevA~~V~fLAS~~ssY----------iTG~t~evtGG 253 (256)
T KOG1200|consen 223 --GEAEEVANLVLFLASDASSY----------ITGTTLEVTGG 253 (256)
T ss_pred --CCHHHHHHHHHHHhcccccc----------ccceeEEEecc
Confidence 23689999988777443322 34477877765
No 252
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.82 E-value=3e-19 Score=165.60 Aligned_cols=209 Identities=16% Similarity=0.125 Sum_probs=141.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||+.++++|+++|++|++++|+.... ...... ....+++++.+|++|.++++++++++
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~---~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 75 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKE---LTKLAE--QYNSNLTFHSLDLQDVHELETNFNEILSSIQ 75 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHH---HHHHHh--ccCCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 36899999999999999999999999999999965211 111111 12346889999999999998888754
Q ss_pred ----CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
.++++|||||.... ....++....+++|+.+...+++.+ ++.+..++||++||...+..
T Consensus 76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-------- 147 (251)
T PRK06924 76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNP-------- 147 (251)
T ss_pred cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCC--------
Confidence 12389999997533 1122334567888999866555544 44333348999999765431
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHH-----hCCcEEEEEeccccCCCCCC-----CCcHHHHHHHHHcCCceeEEec
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHI-----YGLSITGLRFFTVYGPWGRP-----DMAYFFFTRDIIRGKRITVYEA 290 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~i~~~~vrp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 290 (424)
..+...|+.+|.+.+.+++.++.+ .+++++.|+||.+-.+.... .... .....+....+
T Consensus 148 ----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~------ 216 (251)
T PRK06924 148 ----YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDF-TNLDRFITLKE------ 216 (251)
T ss_pred ----CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccc-hHHHHHHHHhh------
Confidence 145678999999999999998765 37999999999887652110 0000 00111111000
Q ss_pred CCCCccccccccHHHHHHHHHHHhhhc
Q 042406 291 PDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 291 ~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
..-+..++|+|++++.++...
T Consensus 217 ------~~~~~~~~dva~~~~~l~~~~ 237 (251)
T PRK06924 217 ------EGKLLSPEYVAKALRNLLETE 237 (251)
T ss_pred ------cCCcCCHHHHHHHHHHHHhcc
Confidence 012678999999999998863
No 253
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.82 E-value=2.3e-18 Score=158.27 Aligned_cols=221 Identities=13% Similarity=0.067 Sum_probs=152.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+.+++|+||||+|+||.++++.|+++|++|++++|+.+......... ....+++++.+|++|.+++.+++++.
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 78 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTL----SKYGNIHYVVGDVSSTESARNVIEKAAKV 78 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----HhcCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999654322211111 12236889999999999998887654
Q ss_pred --CccEEEEcccccCch--hhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVR--YAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPA 228 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~--~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~ 228 (424)
.+|.+||++|..... ...++.+..+++|+.+...+++.+.+.- ...+||++||...... +..+.
T Consensus 79 ~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~-----------~~~~~ 147 (238)
T PRK05786 79 LNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYK-----------ASPDQ 147 (238)
T ss_pred hCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhccc-----------CCCCc
Confidence 369999999864321 1113345678999999887777765431 1237999998654211 11345
Q ss_pred ChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHH
Q 042406 229 SLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 305 (424)
..|+.+|.+.+.+++.+..+. +++++++|||+++++..... .... ... . ...++..+|
T Consensus 148 ~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-----~~~~------~~~-----~---~~~~~~~~~ 208 (238)
T PRK05786 148 LSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-----NWKK------LRK-----L---GDDMAPPED 208 (238)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-----hhhh------hcc-----c---cCCCCCHHH
Confidence 679999999999999988764 89999999999998742210 0000 000 0 112567899
Q ss_pred HHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 306 IVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 306 va~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
++++++.++...... ..|+.+.+.++
T Consensus 209 va~~~~~~~~~~~~~----------~~g~~~~~~~~ 234 (238)
T PRK05786 209 FAKVIIWLLTDEADW----------VDGVVIPVDGG 234 (238)
T ss_pred HHHHHHHHhcccccC----------ccCCEEEECCc
Confidence 999999998754321 22367776554
No 254
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.82 E-value=1.3e-18 Score=166.57 Aligned_cols=223 Identities=13% Similarity=0.070 Sum_probs=146.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
+|+++||||+++||.++++.|+++| ++|++++|+.+...+...... .....+.++.+|++|.++++++++..
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 79 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLG---MPKDSYTIMHLDLGSLDSVRQFVQQFRESG 79 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc---CCCCeEEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 6789999999999999999999999 999999997654333222111 12346788999999999998887653
Q ss_pred -CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHH----HhcCC-CCeEEEecCCcccCCCC----CCCC
Q 042406 154 -AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETC----KSSDP-QPAIVWASSSSVYGVNK----KVPF 218 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~-~~~~v~~SS~~vyg~~~----~~~~ 218 (424)
++|++|||||+.... ...++.+..+++|+.|+..+++++ ++.+. ..+||++||...+.... ..+.
T Consensus 80 ~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~ 159 (314)
T TIGR01289 80 RPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA 159 (314)
T ss_pred CCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence 589999999975321 122334678999999987775554 44321 24899999987653210 0000
Q ss_pred ------------------CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEEecccc-CCCCCCCCc-HHH
Q 042406 219 ------------------SEKDRTDQPASLYAATKKAGEAIAHAYNHIY----GLSITGLRFFTVY-GPWGRPDMA-YFF 274 (424)
Q Consensus 219 ------------------~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~i~~~~vrp~~v~-G~~~~~~~~-~~~ 274 (424)
.+. ....+...|+.||++...++++++++. |+++++|+||.|. .+-...... ...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~ 238 (314)
T TIGR01289 160 NLGDLSGLAAGFKAPIAMIDG-KEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRT 238 (314)
T ss_pred cccccccccccCCCcccccCC-CCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHH
Confidence 011 122456789999999999888887653 7999999999985 332221110 101
Q ss_pred HHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 275 FTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
+...+.. ... ..+..+++.|+.++.++....
T Consensus 239 ~~~~~~~---~~~----------~~~~~~~~~a~~l~~~~~~~~ 269 (314)
T TIGR01289 239 LFPPFQK---YIT----------KGYVSEEEAGERLAQVVSDPK 269 (314)
T ss_pred HHHHHHH---HHh----------ccccchhhhhhhhHHhhcCcc
Confidence 1111100 000 114678899999998877654
No 255
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.82 E-value=2.6e-18 Score=158.90 Aligned_cols=206 Identities=17% Similarity=0.161 Sum_probs=144.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCC--CHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN--DKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~--d~~~v~~~~~~~ 153 (424)
..++|+|+||||+|+||.+++++|+++|++|++++|+.+.......... .....++.++.+|++ +.+++.++++.+
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 86 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIE--AAGGPQPAIIPLDLLTATPQNYQQLADTI 86 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHH--hcCCCCceEEEecccCCCHHHHHHHHHHH
Confidence 4688999999999999999999999999999999997643332222111 112345677788886 666666655543
Q ss_pred -----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++. +.+.. +||++||.......
T Consensus 87 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~-~iv~~ss~~~~~~~------ 159 (247)
T PRK08945 87 EEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAA-SLVFTSSSVGRQGR------ 159 (247)
T ss_pred HHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCC-EEEEEccHhhcCCC------
Confidence 579999999975331 1123346789999999888877664 44443 89999996543211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.....|+.||++.+.+++.++.++ ++++++++||.+-++-... ..... ..
T Consensus 160 ------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~----------~~~~~---------~~-- 212 (247)
T PRK08945 160 ------ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS----------AFPGE---------DP-- 212 (247)
T ss_pred ------CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh----------hcCcc---------cc--
Confidence 334679999999999999988765 7999999999887652110 00000 00
Q ss_pred ccccccHHHHHHHHHHHhhhcc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
..+...+|++.+++.++....
T Consensus 213 -~~~~~~~~~~~~~~~~~~~~~ 233 (247)
T PRK08945 213 -QKLKTPEDIMPLYLYLMGDDS 233 (247)
T ss_pred -cCCCCHHHHHHHHHHHhCccc
Confidence 125678999999999876543
No 256
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=99.82 E-value=3.2e-18 Score=161.78 Aligned_cols=232 Identities=11% Similarity=0.005 Sum_probs=150.9
Q ss_pred CCCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhh------hc----cCCeEEEEccC--
Q 042406 75 RSTRGLTVLVTGA--AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL------LE----RAGVFVIDADI-- 140 (424)
Q Consensus 75 ~~~~~~~vlItGg--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~----~~~v~~~~~Dl-- 140 (424)
..++||++||||| +++||.++++.|+++|++|++ .|..+.++......+... .. .....++.+|+
T Consensus 5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 83 (303)
T PLN02730 5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF 83 (303)
T ss_pred cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence 4588999999999 899999999999999999988 666555444332222110 01 11246788898
Q ss_pred CCH------------------HHHHHHhhcc-----CccEEEEcccccCc------hhhccChHHHHHHHHHHHHHHHHH
Q 042406 141 NDK------------------SLLDKIFNVV-----AFTHVMHLAAQAGV------RYAMQNPNSYVESNIAGFVNLLET 191 (424)
Q Consensus 141 ~d~------------------~~v~~~~~~~-----~~d~vi~~Ag~~~~------~~~~~~~~~~~~~N~~g~~~ll~a 191 (424)
++. ++++++++.+ ++|+||||||.... ....++.+..+++|+.++..++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~ 163 (303)
T PLN02730 84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQH 163 (303)
T ss_pred CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHH
Confidence 333 3677766654 58999999975321 122344567999999998888776
Q ss_pred HHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHHh----CCcEEEEEeccccCCC
Q 042406 192 CKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTDQPA-SLYAATKKAGEAIAHAYNHIY----GLSITGLRFFTVYGPW 265 (424)
Q Consensus 192 ~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~----~i~~~~vrp~~v~G~~ 265 (424)
+..... ..+||++||....... ... ..|+.||++.+.+.+.++.++ |+++++|.||.|-.+-
T Consensus 164 ~~p~m~~~G~II~isS~a~~~~~------------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~ 231 (303)
T PLN02730 164 FGPIMNPGGASISLTYIASERII------------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRA 231 (303)
T ss_pred HHHHHhcCCEEEEEechhhcCCC------------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCch
Confidence 654311 1389999996543210 112 479999999999999998763 6999999999998763
Q ss_pred CCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 266 GRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
...-............. .++ .-+...+|++.+++.++...... ..|+++.+.++
T Consensus 232 ~~~~~~~~~~~~~~~~~--~pl----------~r~~~peevA~~~~fLaS~~a~~----------itG~~l~vdGG 285 (303)
T PLN02730 232 AKAIGFIDDMIEYSYAN--APL----------QKELTADEVGNAAAFLASPLASA----------ITGATIYVDNG 285 (303)
T ss_pred hhcccccHHHHHHHHhc--CCC----------CCCcCHHHHHHHHHHHhCccccC----------ccCCEEEECCC
Confidence 32100001111111111 111 12467899999999988754432 33467776654
No 257
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.7e-18 Score=154.74 Aligned_cols=182 Identities=18% Similarity=0.172 Sum_probs=137.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-CccEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-AFTHV 158 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~~d~v 158 (424)
|+++||||+|+||+++++.|+++ ++|++++|+.. .+++|++|.++++++++.. ++|+|
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~~~id~l 59 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG--------------------DVQVDITDPASIRALFEKVGKVDAV 59 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC--------------------ceEecCCChHHHHHHHHhcCCCCEE
Confidence 57999999999999999999999 99999998431 4689999999999999876 68999
Q ss_pred EEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHH
Q 042406 159 MHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAA 233 (424)
Q Consensus 159 i~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~ 233 (424)
|||||...... ..++.+..+++|+.++.++++++.... ...+|+++||...... ......|+.
T Consensus 60 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~------------~~~~~~Y~~ 127 (199)
T PRK07578 60 VSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEP------------IPGGASAAT 127 (199)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCC------------CCCchHHHH
Confidence 99999754321 222345688999999999998876531 1237999988654321 134578999
Q ss_pred HHHHHHHHHHHHHHH--hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 234 TKKAGEAIAHAYNHI--YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 234 sK~~~e~~~~~~~~~--~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
+|.+.+.+++.++.+ .|++++.|+||.+-.+... . +. .++ + ..++..+|+|++++
T Consensus 128 sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~-----------~--~~---~~~--~-----~~~~~~~~~a~~~~ 184 (199)
T PRK07578 128 VNGALEGFVKAAALELPRGIRINVVSPTVLTESLEK-----------Y--GP---FFP--G-----FEPVPAARVALAYV 184 (199)
T ss_pred HHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhh-----------h--hh---cCC--C-----CCCCCHHHHHHHHH
Confidence 999999999998876 4899999999988544110 0 00 010 1 13678999999999
Q ss_pred HHhhhc
Q 042406 312 AGLDTA 317 (424)
Q Consensus 312 ~~~~~~ 317 (424)
.+++..
T Consensus 185 ~~~~~~ 190 (199)
T PRK07578 185 RSVEGA 190 (199)
T ss_pred HHhccc
Confidence 888753
No 258
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.81 E-value=1.8e-18 Score=182.46 Aligned_cols=203 Identities=17% Similarity=0.184 Sum_probs=151.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||++++++|+++|++|++++|+.+...+....... ...++.++.+|++|.++++++++++
T Consensus 368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 444 (657)
T PRK07201 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRA---KGGTAHAYTCDLTDSAAVDHTVKDILA 444 (657)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999976543332222211 1346889999999999999888754
Q ss_pred ---CccEEEEcccccCchh---h---ccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY---A---MQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~---~---~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... . .++.+..+++|+.|+.++++++ ++.+.+ +||++||.+.+...
T Consensus 445 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~~------- 516 (657)
T PRK07201 445 EHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFG-HVVNVSSIGVQTNA------- 516 (657)
T ss_pred hcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCC-EEEEECChhhcCCC-------
Confidence 5799999999743211 1 1235678999999988776654 444444 89999998887531
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.....|+.||++.+.+++.++.++ |+++++|+||.|.++...+.. .+ . .
T Consensus 517 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~----------------~~---~----~ 568 (657)
T PRK07201 517 -----PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK----------------RY---N----N 568 (657)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc----------------cc---c----C
Confidence 335789999999999999988664 899999999999887432110 00 0 0
Q ss_pred cccccHHHHHHHHHHHhhhc
Q 042406 298 RDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~ 317 (424)
...+..+++|+.++..+...
T Consensus 569 ~~~~~~~~~a~~i~~~~~~~ 588 (657)
T PRK07201 569 VPTISPEEAADMVVRAIVEK 588 (657)
T ss_pred CCCCCHHHHHHHHHHHHHhC
Confidence 12567899999999887653
No 259
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.81 E-value=4.1e-18 Score=162.24 Aligned_cols=179 Identities=11% Similarity=0.087 Sum_probs=127.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch------hhhHHHHHhhh-hccCCeEEEEccCCCHHHHH
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY------ETSLKKARKGL-LERAGVFVIDADINDKSLLD 147 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~ 147 (424)
.++++|+++||||+++||.+++++|+++|++|++++|+.... .+......... .....+.++++|++|.++++
T Consensus 4 ~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~ 83 (305)
T PRK08303 4 KPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVR 83 (305)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 356889999999999999999999999999999999974321 01111111111 11235778999999999999
Q ss_pred HHhhcc-----CccEEEEcc-cccC-----chhh---ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcc
Q 042406 148 KIFNVV-----AFTHVMHLA-AQAG-----VRYA---MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSV 209 (424)
Q Consensus 148 ~~~~~~-----~~d~vi~~A-g~~~-----~~~~---~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~v 209 (424)
++++.+ ++|++|||| |... .... .++....+++|+.++..+++++.. .+. .+||++||...
T Consensus 84 ~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~-g~IV~isS~~~ 162 (305)
T PRK08303 84 ALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPG-GLVVEITDGTA 162 (305)
T ss_pred HHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCC-cEEEEECCccc
Confidence 888764 689999999 7421 1111 122346788999998777665543 322 38999998543
Q ss_pred -cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCC
Q 042406 210 -YGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGP 264 (424)
Q Consensus 210 -yg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~ 264 (424)
++.. .......|++||++.+.+++.++.++ |+++++|.||.|-.+
T Consensus 163 ~~~~~----------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~ 211 (305)
T PRK08303 163 EYNAT----------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSE 211 (305)
T ss_pred cccCc----------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccH
Confidence 2210 01224579999999999999998775 799999999988665
No 260
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=99.81 E-value=2.6e-19 Score=154.77 Aligned_cols=226 Identities=17% Similarity=0.154 Sum_probs=156.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
..+||++++|||.|+||+++.++|+++|..+.+++.+.+..+. ............+.|+++|+++..+++++|+++
T Consensus 2 ~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a--~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~ 79 (261)
T KOG4169|consen 2 DLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEA--IAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA 79 (261)
T ss_pred cccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHH--HHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence 4679999999999999999999999999988777665543222 222334456778999999999999999999887
Q ss_pred ---CccEEEEcccccCchhhccChHHHHHHHHHH----HHHHHHHHHhc--CCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYAMQNPNSYVESNIAG----FVNLLETCKSS--DPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g----~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
.+|++||+||+.. +.+.+.++.+|+.| |...++.+.+. |.+..+|++||......
T Consensus 80 ~fg~iDIlINgAGi~~----dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P------------ 143 (261)
T KOG4169|consen 80 TFGTIDILINGAGILD----DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP------------ 143 (261)
T ss_pred HhCceEEEEccccccc----chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc------------
Confidence 6899999999965 56789999999987 45566666554 34558999999544321
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH-----hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHc-CCceeEEecCCCCcccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI-----YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIR-GKRITVYEAPDGASVAR 298 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~-----~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 298 (424)
-.-...|++||+..-.+.++++.. .|+++..+|||.+-.. +...+.. +..+..-+.--+.-.+.
T Consensus 144 ~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~----------l~~~~~~~~~~~e~~~~~~~~l~~~ 213 (261)
T KOG4169|consen 144 MPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD----------LAENIDASGGYLEYSDSIKEALERA 213 (261)
T ss_pred cccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH----------HHHHHHhcCCcccccHHHHHHHHHc
Confidence 134578999999999999997643 3999999999976431 2222211 11110000000000001
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.--...+|+..++.+++.+.. |.+|-+..+.
T Consensus 214 ~~q~~~~~a~~~v~aiE~~~N-------------Gaiw~v~~g~ 244 (261)
T KOG4169|consen 214 PKQSPACCAINIVNAIEYPKN-------------GAIWKVDSGS 244 (261)
T ss_pred ccCCHHHHHHHHHHHHhhccC-------------CcEEEEecCc
Confidence 123457888999999988542 3678777654
No 261
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.81 E-value=4.9e-19 Score=163.37 Aligned_cols=165 Identities=19% Similarity=0.106 Sum_probs=125.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc------
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV------ 152 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~------ 152 (424)
+|+++||||+|+||++++++|+++|++|++++|+.+.. .. .....++.++++|++|.+++++++++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~------~~--~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 72 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS------LA--AAAGERLAEVELDLSDAAAAAAWLAGDLLAAF 72 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh------hh--hccCCeEEEEEeccCCHHHHHHHHHHHHHHHh
Confidence 46899999999999999999999999999999965421 11 11234688999999999999886544
Q ss_pred ---cCccEEEEcccccCch--h---hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 153 ---VAFTHVMHLAAQAGVR--Y---AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 153 ---~~~d~vi~~Ag~~~~~--~---~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
.++|++|||||..... . ..++.+..+++|+.++..+.+.+. +.+. ++||++||...+..
T Consensus 73 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~-------- 143 (243)
T PRK07023 73 VDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAE-RRILHISSGAARNA-------- 143 (243)
T ss_pred ccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCC-CEEEEEeChhhcCC--------
Confidence 1579999999975431 1 122345788999999776655554 3333 38999999876642
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHH--hCCcEEEEEeccccCC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHI--YGLSITGLRFFTVYGP 264 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~~i~~~~vrp~~v~G~ 264 (424)
..+...|+.+|.+.|.+++.++.+ .++++++|+||.+-++
T Consensus 144 ----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 144 ----YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 145678999999999999998865 4899999999998665
No 262
>PRK06484 short chain dehydrogenase; Validated
Probab=99.80 E-value=4.4e-18 Score=174.56 Aligned_cols=171 Identities=18% Similarity=0.173 Sum_probs=131.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
.++|+++||||+++||.++++.|+++|++|++++|+.+........ . ..++.++.+|++|+++++++++.+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADS-----L-GPDHHALAMDVSDEAQIREGFEQLHRE 76 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----h-CCceeEEEeccCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999975443322111 1 246778999999999999888764
Q ss_pred --CccEEEEcccccCc------hhhccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGV------RYAMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.... ....++.+..+++|+.++.++++++... +.+.+||++||.......
T Consensus 77 ~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~-------- 148 (520)
T PRK06484 77 FGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL-------- 148 (520)
T ss_pred hCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC--------
Confidence 58999999997321 1223344679999999998888776543 322389999996654321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPW 265 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~ 265 (424)
.....|+++|++.+.+++.++.++ ++++++|+||.|..+.
T Consensus 149 ----~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~ 191 (520)
T PRK06484 149 ----PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQM 191 (520)
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchh
Confidence 234789999999999999998764 8999999999987663
No 263
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.80 E-value=2.7e-18 Score=159.71 Aligned_cols=211 Identities=14% Similarity=0.065 Sum_probs=143.2
Q ss_pred eEEEEcCCChhHHHHHHHHHh----CCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 81 TVLVTGAAGFVGSHVSLALKK----RGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
.++||||+++||.+++++|++ .|++|++++|+.+..+......... .....+.++.+|++|.++++++++.+
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAE-RSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhc-CCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 589999999999999999997 7999999999765444333222211 12346889999999999998887654
Q ss_pred ------CccEEEEcccccCch--hh-----ccChHHHHHHHHHHHHHHHHHHHh----c-CCCCeEEEecCCcccCCCCC
Q 042406 154 ------AFTHVMHLAAQAGVR--YA-----MQNPNSYVESNIAGFVNLLETCKS----S-DPQPAIVWASSSSVYGVNKK 215 (424)
Q Consensus 154 ------~~d~vi~~Ag~~~~~--~~-----~~~~~~~~~~N~~g~~~ll~a~~~----~-~~~~~~v~~SS~~vyg~~~~ 215 (424)
..|+||||||..... .. .++.+..+++|+.++..+.+++.+ . +..++||++||.+.+..
T Consensus 81 ~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~--- 157 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQP--- 157 (256)
T ss_pred cccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCC---
Confidence 136999999974321 11 123357899999998777665533 2 22248999999765431
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC---CCcHHHHHHHHHcCCceeEEe
Q 042406 216 VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP---DMAYFFFTRDIIRGKRITVYE 289 (424)
Q Consensus 216 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~ 289 (424)
......|+.||.+.+.+++.++.++ |+++++++||.|-.+.... ...-+.....+....+
T Consensus 158 ---------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~----- 223 (256)
T TIGR01500 158 ---------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKA----- 223 (256)
T ss_pred ---------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHh-----
Confidence 1345789999999999999998764 7999999999997652110 0000000111111100
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhh
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
..-+...+|+|.+++.++++
T Consensus 224 -------~~~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 224 -------KGKLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred -------cCCCCCHHHHHHHHHHHHhc
Confidence 01267789999999999864
No 264
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.80 E-value=5.5e-18 Score=154.60 Aligned_cols=171 Identities=10% Similarity=0.108 Sum_probs=126.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+++||++++++|+++|++|++++|+.+..++....... ...++..+.+|++|.++++++++.+
T Consensus 2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (227)
T PRK08862 2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSA---LTDNVYSFQLKDFSQESIRHLFDAIEQ 78 (227)
T ss_pred CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh---cCCCeEEEEccCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999976654443322221 1345788999999999998877643
Q ss_pred ----CccEEEEcccccCch-hh-c---cChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR-YA-M---QNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~-~~-~---~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|++|||||..... .. + ++....+++|+.++..+++. +++.+....||++||...+
T Consensus 79 ~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---------- 148 (227)
T PRK08862 79 QFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---------- 148 (227)
T ss_pred HhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC----------
Confidence 589999999853321 11 1 12234677788876665443 4443323489999985432
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGP 264 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~ 264 (424)
.+...|+.+|++.+.+.+.++.++ |+++..|+||.+-.+
T Consensus 149 -----~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 149 -----QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred -----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence 224679999999999999998764 899999999998876
No 265
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.79 E-value=4e-18 Score=155.13 Aligned_cols=192 Identities=18% Similarity=0.108 Sum_probs=141.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---Cc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---AF 155 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---~~ 155 (424)
+|+++||||+|+||++++++|+++|++|++++|+.+..+. . ...+++++.+|++|.+.++++++.. ++
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~----~-----~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 71 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAA----L-----QALGAEALALDVADPASVAGLAWKLDGEAL 71 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHH----H-----HhccceEEEecCCCHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999996432211 1 1124678999999999998876544 58
Q ss_pred cEEEEcccccCch------hhccChHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEecCC-cccCCCCCCCCCCCCCCCC
Q 042406 156 THVMHLAAQAGVR------YAMQNPNSYVESNIAGFVNLLETCKSSD--PQPAIVWASSS-SVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 156 d~vi~~Ag~~~~~------~~~~~~~~~~~~N~~g~~~ll~a~~~~~--~~~~~v~~SS~-~vyg~~~~~~~~e~~~~~~ 226 (424)
|+|||++|..... ...++.+..+++|+.++.++++++...- ...++|++||. +.++... ..
T Consensus 72 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~----------~~ 141 (222)
T PRK06953 72 DAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT----------GT 141 (222)
T ss_pred CEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc----------CC
Confidence 9999999986321 1233457799999999999998886521 12378888885 4454211 01
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh-CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY-GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~-~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 305 (424)
+...|+.+|.+.+.+++.++.++ +++++.++||.+..+.... ...+..+|
T Consensus 142 ~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~-----------------------------~~~~~~~~ 192 (222)
T PRK06953 142 TGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA-----------------------------QAALDPAQ 192 (222)
T ss_pred CccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC-----------------------------CCCCCHHH
Confidence 22469999999999999988765 8999999999998763210 01345688
Q ss_pred HHHHHHHHhhhcc
Q 042406 306 IVKGCLAGLDTAK 318 (424)
Q Consensus 306 va~a~~~~~~~~~ 318 (424)
.+..+..++....
T Consensus 193 ~~~~~~~~~~~~~ 205 (222)
T PRK06953 193 SVAGMRRVIAQAT 205 (222)
T ss_pred HHHHHHHHHHhcC
Confidence 8888888776553
No 266
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.79 E-value=1e-17 Score=168.65 Aligned_cols=226 Identities=20% Similarity=0.149 Sum_probs=154.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
...++++++||||+|+||..+++.|+++|++|++++|.... +....... .-+..++.+|++|.++++++++..
T Consensus 206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~--~~l~~~~~----~~~~~~~~~Dv~~~~~~~~~~~~~~ 279 (450)
T PRK08261 206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG--EALAAVAN----RVGGTALALDITAPDAPARIAEHLA 279 (450)
T ss_pred cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHHH----HcCCeEEEEeCCCHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999884321 11111111 123468899999999998888754
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCC---CCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDP---QPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~---~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++.+++..... ..+||++||.+.+...
T Consensus 280 ~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~--------- 350 (450)
T PRK08261 280 ERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN--------- 350 (450)
T ss_pred HhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC---------
Confidence 5799999999754321 2233467899999999999998876322 2389999997654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.....|+.+|.+.+.+++.++.+ .|+++++|+||.+-.+.... ++.......... ..+ ..
T Consensus 351 ---~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~---~~~~~~~~~~~~-~~l----------~~ 413 (450)
T PRK08261 351 ---RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA---IPFATREAGRRM-NSL----------QQ 413 (450)
T ss_pred ---CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc---cchhHHHHHhhc-CCc----------CC
Confidence 34578999999999999888765 38999999999986542211 111111111110 011 11
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
....+|++++++.++...... ..|+++.++++.
T Consensus 414 ~~~p~dva~~~~~l~s~~~~~----------itG~~i~v~g~~ 446 (450)
T PRK08261 414 GGLPVDVAETIAWLASPASGG----------VTGNVVRVCGQS 446 (450)
T ss_pred CCCHHHHHHHHHHHhChhhcC----------CCCCEEEECCCc
Confidence 234679999999887643321 445888887754
No 267
>PLN00015 protochlorophyllide reductase
Probab=99.78 E-value=1.7e-17 Score=158.60 Aligned_cols=220 Identities=15% Similarity=0.086 Sum_probs=140.8
Q ss_pred EEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----Ccc
Q 042406 83 LVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----AFT 156 (424)
Q Consensus 83 lItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~~d 156 (424)
+||||+++||.+++++|+++| ++|++.+|+.+.......... .....+.++.+|++|.++++++++.+ ++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD 77 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAG---MPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLD 77 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhc---CCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCC
Confidence 699999999999999999999 999999996543332222111 11346888999999999998887754 589
Q ss_pred EEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHH----HHhcCC-CCeEEEecCCcccCCC-----CC----CC
Q 042406 157 HVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLET----CKSSDP-QPAIVWASSSSVYGVN-----KK----VP 217 (424)
Q Consensus 157 ~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a----~~~~~~-~~~~v~~SS~~vyg~~-----~~----~~ 217 (424)
+||||||+.... ...++.+..+++|+.|+..++++ +++.+. ..+||++||...+-.. .. ..
T Consensus 78 ~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~ 157 (308)
T PLN00015 78 VLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGD 157 (308)
T ss_pred EEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhh
Confidence 999999975321 12233467999999997776554 444331 2489999997654110 00 00
Q ss_pred -------CCC-------CCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEEeccccC-CCCCCCCcHHHHHHH
Q 042406 218 -------FSE-------KDRTDQPASLYAATKKAGEAIAHAYNHIY----GLSITGLRFFTVYG-PWGRPDMAYFFFTRD 278 (424)
Q Consensus 218 -------~~e-------~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~i~~~~vrp~~v~G-~~~~~~~~~~~~~~~ 278 (424)
..+ +.....+...|+.||++.+.+++.+++++ |+++++|+||.|.. +-..... .. ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~--~~-~~~ 234 (308)
T PLN00015 158 LRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHI--PL-FRL 234 (308)
T ss_pred hhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccccc--HH-HHH
Confidence 000 00111345779999999888878887653 79999999999953 3221111 01 110
Q ss_pred HHc-CCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 279 IIR-GKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 279 ~~~-~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
+.. ...... ..+...++.|+.++.++....
T Consensus 235 ~~~~~~~~~~----------~~~~~pe~~a~~~~~l~~~~~ 265 (308)
T PLN00015 235 LFPPFQKYIT----------KGYVSEEEAGKRLAQVVSDPS 265 (308)
T ss_pred HHHHHHHHHh----------cccccHHHhhhhhhhhccccc
Confidence 000 000000 014678999999988776544
No 268
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.77 E-value=6.5e-18 Score=154.06 Aligned_cols=170 Identities=19% Similarity=0.149 Sum_probs=126.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---Cc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---AF 155 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---~~ 155 (424)
+|+|+||||+|+||++++++|+++|++|++++|+.+..... . ...++.++.+|++|.++++++++.. ++
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~----~----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~i 72 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL----Q----ALPGVHIEKLDMNDPASLDQLLQRLQGQRF 72 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH----H----hccccceEEcCCCCHHHHHHHHHHhhcCCC
Confidence 36899999999999999999999999999999976542211 1 1236788899999999998888754 68
Q ss_pred cEEEEcccccCch------hhccChHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEecCCcccCCCCCCCCCCCCCCCCC
Q 042406 156 THVMHLAAQAGVR------YAMQNPNSYVESNIAGFVNLLETCKSSD--PQPAIVWASSSSVYGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 156 d~vi~~Ag~~~~~------~~~~~~~~~~~~N~~g~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~ 227 (424)
|+||||||..... ....+.+..+.+|+.++..+++++.... ...+++++||.. |.... ++..+
T Consensus 73 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~--g~~~~-------~~~~~ 143 (225)
T PRK08177 73 DLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQL--GSVEL-------PDGGE 143 (225)
T ss_pred CEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCc--ccccc-------CCCCC
Confidence 9999999985321 1122334678899999988888775432 113788888743 32110 01133
Q ss_pred CChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCC
Q 042406 228 ASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPW 265 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~ 265 (424)
...|+.+|.+.+.+++.+++++ ++++++|+||.+-.+.
T Consensus 144 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 144 MPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred ccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 4579999999999999998764 7999999999997763
No 269
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.77 E-value=2.5e-17 Score=151.89 Aligned_cols=190 Identities=18% Similarity=0.117 Sum_probs=130.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+++|+++||||+|+||++++++|+++|++|++++|+..... . .. .. ....++.+|++|.+++.+.+.. +
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~---~-~~---~~-~~~~~~~~D~~~~~~~~~~~~~--i 80 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNS---E-SN---DE-SPNEWIKWECGKEESLDKQLAS--L 80 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhh---h-hh---cc-CCCeEEEeeCCCHHHHHHhcCC--C
Confidence 457899999999999999999999999999999998652111 0 00 11 1236789999999999988875 5
Q ss_pred cEEEEcccccCc-hhhccChHHHHHHHHHHHHHHHHHHHhcC------CCCeEEEecCCcccCCCCCCCCCCCCCCCCCC
Q 042406 156 THVMHLAAQAGV-RYAMQNPNSYVESNIAGFVNLLETCKSSD------PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPA 228 (424)
Q Consensus 156 d~vi~~Ag~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~------~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~ 228 (424)
|++|||||.... ....++.+..+++|+.|+.++++++.... .++.++..||.+.+.. ...
T Consensus 81 DilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-------------~~~ 147 (245)
T PRK12367 81 DVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-------------ALS 147 (245)
T ss_pred CEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-------------CCC
Confidence 999999997432 22234557899999999999888765421 1223444455433221 123
Q ss_pred ChHHHHHHHHHHHH---HHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 229 SLYAATKKAGEAIA---HAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~---~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
..|++||++.+.+. +++..+ .++.++.+.||.+..+-. + ...+.
T Consensus 148 ~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~-----------------~-------------~~~~~ 197 (245)
T PRK12367 148 PSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN-----------------P-------------IGIMS 197 (245)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC-----------------c-------------cCCCC
Confidence 56999999986543 333222 378888888876543210 0 01466
Q ss_pred HHHHHHHHHHHhhhcc
Q 042406 303 IDDIVKGCLAGLDTAK 318 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~ 318 (424)
.+|+|+.++.++.+..
T Consensus 198 ~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 198 ADFVAKQILDQANLGL 213 (245)
T ss_pred HHHHHHHHHHHHhcCC
Confidence 8999999999987654
No 270
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.77 E-value=1.2e-17 Score=162.09 Aligned_cols=265 Identities=19% Similarity=0.173 Sum_probs=181.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC---CeEEEEeCCCCchhhh--HHHHHhh-----h-----hccCCeEEEEccCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRG---DGVLGLDNFNNYYETS--LKKARKG-----L-----LERAGVFVIDADIN 141 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~--~~~~~~~-----~-----~~~~~v~~~~~Dl~ 141 (424)
..+|+|+|||||||+|+.++++|++.- -+++++-|.+...... ......+ . ....++..+.+|++
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~ 89 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS 89 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence 468999999999999999999999974 2788999977543221 1111110 0 12367889999998
Q ss_pred CH------HHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC---C
Q 042406 142 DK------SLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG---V 212 (424)
Q Consensus 142 d~------~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg---~ 212 (424)
++ +.++...+++ |+|||+|+....+ +..+....+|..||.++++.|++......++++|++.+.- .
T Consensus 90 ~~~LGis~~D~~~l~~eV--~ivih~AAtvrFd---e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~ 164 (467)
T KOG1221|consen 90 EPDLGISESDLRTLADEV--NIVIHSAATVRFD---EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGH 164 (467)
T ss_pred CcccCCChHHHHHHHhcC--CEEEEeeeeeccc---hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheeccccc
Confidence 64 4556666766 9999999976543 3446789999999999999999987666999999987751 1
Q ss_pred CCCCCCCCCC--CC-----------------------CCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 213 NKKVPFSEKD--RT-----------------------DQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 213 ~~~~~~~e~~--~~-----------------------~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
..+.++.+.. .+ ....+.|.-+|+.+|.++...++ +++++|+||+.|.+....
T Consensus 165 i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~--~lPivIiRPsiI~st~~E 242 (467)
T KOG1221|consen 165 IEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE--NLPLVIIRPSIITSTYKE 242 (467)
T ss_pred ccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc--CCCeEEEcCCceeccccC
Confidence 1122222211 00 01247799999999999988765 899999999999886543
Q ss_pred CC-CcH------HHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCC
Q 042406 268 PD-MAY------FFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGN 340 (424)
Q Consensus 268 ~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 340 (424)
+= +++ ..++-..-+|.--.+. .+.+...|+|.+|.|+.+++.+.-....... ..+..+||+++
T Consensus 243 P~pGWidn~~gp~g~i~g~gkGvlr~~~---~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~-------~~~~~IY~~ts 312 (467)
T KOG1221|consen 243 PFPGWIDNLNGPDGVIIGYGKGVLRCFL---VDPKAVADIIPVDMVVNAMIASAWQHAGNSK-------EKTPPIYHLTS 312 (467)
T ss_pred CCCCccccCCCCceEEEEeccceEEEEE---EccccccceeeHHHHHHHHHHHHHHHhccCC-------CCCCcEEEecc
Confidence 20 000 0011111222222233 4678899999999999999976633221110 02237999999
Q ss_pred C--CcccHHHHHHHHHHHhC
Q 042406 341 T--TPVPVSRLVSLLEKILK 358 (424)
Q Consensus 341 ~--~~~s~~el~~~i~~~~g 358 (424)
+ .++++.++.+...+...
T Consensus 313 s~~Np~t~~~~~e~~~~~~~ 332 (467)
T KOG1221|consen 313 SNDNPVTWGDFIELALRYFE 332 (467)
T ss_pred cccCcccHHHHHHHHHHhcc
Confidence 4 67999999999998875
No 271
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.77 E-value=2e-17 Score=151.80 Aligned_cols=196 Identities=12% Similarity=0.052 Sum_probs=137.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-Ccc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-AFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~~d 156 (424)
|+|+||||+|+||++++++|+++| ..|+...|+... .....++.++++|++|.++++++.+.. ++|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~Dls~~~~~~~~~~~~~~id 69 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP-----------DFQHDNVQWHALDVTDEAEIKQLSEQFTQLD 69 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc-----------ccccCceEEEEecCCCHHHHHHHHHhcCCCC
Confidence 689999999999999999999996 556655663321 012357889999999999988876654 579
Q ss_pred EEEEcccccCchh-------hc---cChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 157 HVMHLAAQAGVRY-------AM---QNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 157 ~vi~~Ag~~~~~~-------~~---~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
+||||||...... .. +.....+.+|+.++..+++.+.. .+. ++++++||.. +.....
T Consensus 70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~-~~i~~iss~~--~~~~~~------ 140 (235)
T PRK09009 70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSES-AKFAVISAKV--GSISDN------ 140 (235)
T ss_pred EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCC-ceEEEEeecc--cccccC------
Confidence 9999999864210 01 11246889999998777666543 333 3788888732 211000
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH-----hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI-----YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
...+...|+++|++.+.+++.++.+ .++++..|.||.+.++.... +.... ..
T Consensus 141 -~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~----------~~~~~------------~~ 197 (235)
T PRK09009 141 -RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKP----------FQQNV------------PK 197 (235)
T ss_pred -CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcc----------hhhcc------------cc
Confidence 1134568999999999999999865 37899999999998764321 00100 01
Q ss_pred cccccHHHHHHHHHHHhhhcc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~ 318 (424)
..++..+|+|++++.++....
T Consensus 198 ~~~~~~~~~a~~~~~l~~~~~ 218 (235)
T PRK09009 198 GKLFTPEYVAQCLLGIIANAT 218 (235)
T ss_pred CCCCCHHHHHHHHHHHHHcCC
Confidence 125788999999999998764
No 272
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.76 E-value=1.4e-18 Score=143.59 Aligned_cols=214 Identities=20% Similarity=0.210 Sum_probs=157.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-C
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-A 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~ 154 (424)
++.|+.|++||+.-+||+.+++.|++.|++|+.+.|+........++ ...-++.+.+|+++-+++.+.+..+ .
T Consensus 4 ~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e------~p~~I~Pi~~Dls~wea~~~~l~~v~p 77 (245)
T KOG1207|consen 4 SLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKE------TPSLIIPIVGDLSAWEALFKLLVPVFP 77 (245)
T ss_pred cccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhh------CCcceeeeEecccHHHHHHHhhcccCc
Confidence 46899999999999999999999999999999999965433332221 2234889999999999999888776 5
Q ss_pred ccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|.++||||+.... ....+.+..|++|+.+..++.+.. .....+..||.+||.+..- +..
T Consensus 78 idgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R------------~~~ 145 (245)
T KOG1207|consen 78 IDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIR------------PLD 145 (245)
T ss_pred hhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccc------------ccC
Confidence 69999999986432 345566789999999988877763 3344555899999965432 224
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
..+.|+++|.+.+.+.+.++-+. ++|+..+.|..|+..-+..+..-+.--+.++..-|+. -|.-+
T Consensus 146 nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~------------rFaEV 213 (245)
T KOG1207|consen 146 NHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLK------------RFAEV 213 (245)
T ss_pred CceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchh------------hhhHH
Confidence 56889999999999999998776 5899999999998754432211111222233332222 27889
Q ss_pred HHHHHHHHHHhhhccc
Q 042406 304 DDIVKGCLAGLDTAKK 319 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~ 319 (424)
+.++.|++.++.....
T Consensus 214 ~eVVnA~lfLLSd~ss 229 (245)
T KOG1207|consen 214 DEVVNAVLFLLSDNSS 229 (245)
T ss_pred HHHHhhheeeeecCcC
Confidence 9999999988876553
No 273
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.75 E-value=9.7e-17 Score=146.23 Aligned_cols=167 Identities=16% Similarity=0.130 Sum_probs=129.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+.++|-|+|||+-++.|..||++|.++|+.|.+.+..++..+...... .+++...++.|++++++++++.+-+
T Consensus 26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~-----~s~rl~t~~LDVT~~esi~~a~~~V~~ 100 (322)
T KOG1610|consen 26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGET-----KSPRLRTLQLDVTKPESVKEAAQWVKK 100 (322)
T ss_pred ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhh-----cCCcceeEeeccCCHHHHHHHHHHHHH
Confidence 466788999999999999999999999999999996555433322222 1678899999999999999888654
Q ss_pred -----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHH----HHHHHHhcCCCCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVN----LLETCKSSDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~----ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
+.-.||||||+.... ...++....+++|+.|+.. ++...+++. .|+|++||.+.=-
T Consensus 101 ~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~-------- 170 (322)
T KOG1610|consen 101 HLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRV-------- 170 (322)
T ss_pred hcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCc--------
Confidence 467899999975431 1234557899999999654 455556654 3999999965511
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTV 261 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v 261 (424)
+.+...+|+.||++.|.+...+.++. |+++.+|-||..
T Consensus 171 ----~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f 211 (322)
T KOG1610|consen 171 ----ALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFF 211 (322)
T ss_pred ----cCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCcc
Confidence 11356889999999999999998774 999999999943
No 274
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.75 E-value=1.2e-16 Score=156.21 Aligned_cols=191 Identities=18% Similarity=0.132 Sum_probs=130.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+..... ... ....+..+.+|++|.+++.+.+.++
T Consensus 175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~----~~~--~~~~v~~v~~Dvsd~~~v~~~l~~I-- 246 (406)
T PRK07424 175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE----ING--EDLPVKTLHWQVGQEAALAELLEKV-- 246 (406)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hhh--cCCCeEEEEeeCCCHHHHHHHhCCC--
Confidence 46789999999999999999999999999999999865432111 111 1234678899999999999988755
Q ss_pred cEEEEcccccCc-hhhccChHHHHHHHHHHHHHHHHHHHh----cCC---CCeEEEecCCcccCCCCCCCCCCCCCCCCC
Q 042406 156 THVMHLAAQAGV-RYAMQNPNSYVESNIAGFVNLLETCKS----SDP---QPAIVWASSSSVYGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 156 d~vi~~Ag~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~---~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~ 227 (424)
|++|||||.... +...++.+..+++|+.|+.++++++.+ .+. +..+|++|++.. . + ..
T Consensus 247 DiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-~------------~-~~ 312 (406)
T PRK07424 247 DILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-N------------P-AF 312 (406)
T ss_pred CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-c------------C-CC
Confidence 999999997532 222334467899999999998887643 221 113555554321 1 1 12
Q ss_pred CChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHH
Q 042406 228 ASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIV 307 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 307 (424)
...|++||.+.+.+..-.....++.+..+.||.+..+ + .+ ...+..+|+|
T Consensus 313 ~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~-----~------------~~-------------~~~~spe~vA 362 (406)
T PRK07424 313 SPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSN-----L------------NP-------------IGVMSADWVA 362 (406)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCC-----C------------Cc-------------CCCCCHHHHH
Confidence 3569999999998864333334565666666443211 0 00 0146789999
Q ss_pred HHHHHHhhhcc
Q 042406 308 KGCLAGLDTAK 318 (424)
Q Consensus 308 ~a~~~~~~~~~ 318 (424)
+.++.++++..
T Consensus 363 ~~il~~i~~~~ 373 (406)
T PRK07424 363 KQILKLAKRDF 373 (406)
T ss_pred HHHHHHHHCCC
Confidence 99999998765
No 275
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=5.7e-17 Score=138.09 Aligned_cols=170 Identities=16% Similarity=0.181 Sum_probs=129.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
...|.+||||||+++||..|+++|.+.|-+|++..|+...+.+.. ...+.+....||+.|.++.+++++..
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~-------~~~p~~~t~v~Dv~d~~~~~~lvewLkk 74 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAK-------AENPEIHTEVCDVADRDSRRELVEWLKK 74 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHH-------hcCcchheeeecccchhhHHHHHHHHHh
Confidence 357889999999999999999999999999999999755433322 23468889999999999877766544
Q ss_pred ---CccEEEEcccccCc------hhhccChHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV------RYAMQNPNSYVESNIAGFVNLLETCKSS---DPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
..++||||||+... ....++.+..+.+|+.++..|..+...+ .....||.+||.-.|-..
T Consensus 75 ~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm-------- 146 (245)
T COG3967 75 EYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPM-------- 146 (245)
T ss_pred hCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcc--------
Confidence 57999999998643 1222334678899999987776665432 113389999997776432
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGP 264 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~ 264 (424)
...-.|+++|++...+...++++. ++++.-+-|+.|-.+
T Consensus 147 ----~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 147 ----ASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred ----cccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 223469999999999988887664 789999999998775
No 276
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.74 E-value=1.7e-16 Score=150.01 Aligned_cols=232 Identities=10% Similarity=-0.012 Sum_probs=139.6
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCC------chhhh-HHHHHhhhh--------------ccCC
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNN------YYETS-LKKARKGLL--------------ERAG 132 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~------~~~~~-~~~~~~~~~--------------~~~~ 132 (424)
.+++|+++||||+ ++||+++++.|+++|++|++.++... ..+.. ......... .-..
T Consensus 5 ~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~ 84 (299)
T PRK06300 5 DLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT 84 (299)
T ss_pred CCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence 4689999999995 99999999999999999999875410 00000 000000000 0011
Q ss_pred eEEEEccCCC--------HHHHHHHhhcc-----CccEEEEcccccC---c---hhhccChHHHHHHHHHHHHHHHHHHH
Q 042406 133 VFVIDADIND--------KSLLDKIFNVV-----AFTHVMHLAAQAG---V---RYAMQNPNSYVESNIAGFVNLLETCK 193 (424)
Q Consensus 133 v~~~~~Dl~d--------~~~v~~~~~~~-----~~d~vi~~Ag~~~---~---~~~~~~~~~~~~~N~~g~~~ll~a~~ 193 (424)
.+-+.+|+.+ .++++++++.+ ++|+||||||... . ....++.+..+++|+.|..++++++.
T Consensus 85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~ 164 (299)
T PRK06300 85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG 164 (299)
T ss_pred CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 1222233322 12355555443 5899999998632 1 12233446789999999988888776
Q ss_pred hcCC-CCeEEEecCCcccCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHHh----CCcEEEEEeccccCCCCC
Q 042406 194 SSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTDQPA-SLYAATKKAGEAIAHAYNHIY----GLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 194 ~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~~----~i~~~~vrp~~v~G~~~~ 267 (424)
.... ..++|++||....... ... ..|++||.+.+.+++.++.++ |+++++|.||.+-.+...
T Consensus 165 p~m~~~G~ii~iss~~~~~~~------------p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~ 232 (299)
T PRK06300 165 PIMNPGGSTISLTYLASMRAV------------PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGK 232 (299)
T ss_pred HHhhcCCeEEEEeehhhcCcC------------CCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhh
Confidence 5321 2378888875443210 112 379999999999999998763 799999999998776321
Q ss_pred CCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 268 PDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
.-.............. ++ ..+...+|++.+++.++...... ..|+++.+.++
T Consensus 233 ~~~~~~~~~~~~~~~~--p~----------~r~~~peevA~~v~~L~s~~~~~----------itG~~i~vdGG 284 (299)
T PRK06300 233 AIGFIERMVDYYQDWA--PL----------PEPMEAEQVGAAAAFLVSPLASA----------ITGETLYVDHG 284 (299)
T ss_pred cccccHHHHHHHHhcC--CC----------CCCcCHHHHHHHHHHHhCccccC----------CCCCEEEECCC
Confidence 1000011111111111 11 12557899999999887654322 33477777655
No 277
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=99.74 E-value=2e-17 Score=152.42 Aligned_cols=218 Identities=15% Similarity=0.142 Sum_probs=152.6
Q ss_pred cCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc------CccE
Q 042406 86 GAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV------AFTH 157 (424)
Q Consensus 86 Gg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~------~~d~ 157 (424)
|++ ++||+.+++.|+++|++|++.+|+.+...........+ .+..++.+|++|.++++++++.+ ++|+
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~ 76 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKE----YGAEVIQCDLSDEESVEALFDEAVERFGGRIDI 76 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHH----TTSEEEESCTTSHHHHHHHHHHHHHHHCSSESE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH----cCCceEeecCcchHHHHHHHHHHHhhcCCCeEE
Confidence 666 99999999999999999999999776543333333322 23447999999999998887653 6899
Q ss_pred EEEcccccCc----hh----hccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCCC
Q 042406 158 VMHLAAQAGV----RY----AMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPA 228 (424)
Q Consensus 158 vi~~Ag~~~~----~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~ 228 (424)
||||++.... .. ..++....+++|+.+...+++++.+.. ....+|++||....... ...
T Consensus 77 lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~------------~~~ 144 (241)
T PF13561_consen 77 LVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM------------PGY 144 (241)
T ss_dssp EEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS------------TTT
T ss_pred EEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC------------ccc
Confidence 9999998654 11 122335689999999888877764321 11379999987554321 334
Q ss_pred ChHHHHHHHHHHHHHHHHHH----hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHH
Q 042406 229 SLYAATKKAGEAIAHAYNHI----YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYID 304 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~----~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 304 (424)
..|+.+|.+.+.+++.++.+ +|||+++|.||.+..+..........+...+....++. -+...+
T Consensus 145 ~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~------------r~~~~~ 212 (241)
T PF13561_consen 145 SAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLG------------RLGTPE 212 (241)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTS------------SHBEHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccC------------CCcCHH
Confidence 68999999999999998865 47999999999998763110000122333333333221 156789
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 305 Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
|+|.+++.++...... ..|+++.+.+|
T Consensus 213 evA~~v~fL~s~~a~~----------itG~~i~vDGG 239 (241)
T PF13561_consen 213 EVANAVLFLASDAASY----------ITGQVIPVDGG 239 (241)
T ss_dssp HHHHHHHHHHSGGGTT----------GTSEEEEESTT
T ss_pred HHHHHHHHHhCccccC----------ccCCeEEECCC
Confidence 9999999988776432 45588888776
No 278
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.73 E-value=1.8e-16 Score=138.14 Aligned_cols=168 Identities=21% Similarity=0.170 Sum_probs=124.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
++++||||+|+||.+++++|+++|+ .|+++.|+...................++.++.+|+++.+++.++++..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999996 6888888654432221101111112356788999999999988887654
Q ss_pred CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc-cCCCCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV-YGVNKKVPFSEKDRTDQPA 228 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v-yg~~~~~~~~e~~~~~~~~ 228 (424)
++|+|||+||...... ..++.+..+++|+.++.++++++++.+.+ ++|++||... ++. ...
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~ii~~ss~~~~~~~-------------~~~ 146 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLD-FFVLFSSVAGVLGN-------------PGQ 146 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcc-eEEEEccHHHhcCC-------------CCc
Confidence 4699999999754321 22344678999999999999999877655 8888888544 332 334
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEEecccc
Q 042406 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVY 262 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~ 262 (424)
..|+.+|.+.+.+++.+.. .+++++++.||.+-
T Consensus 147 ~~y~~sk~~~~~~~~~~~~-~~~~~~~~~~g~~~ 179 (180)
T smart00822 147 ANYAAANAFLDALAAHRRA-RGLPATSINWGAWA 179 (180)
T ss_pred hhhHHHHHHHHHHHHHHHh-cCCceEEEeecccc
Confidence 6799999999999976654 58999999998764
No 279
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.73 E-value=8e-17 Score=139.62 Aligned_cols=154 Identities=19% Similarity=0.171 Sum_probs=117.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCC--CCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNF--NNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~--~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
|+++||||+++||+.++++|+++|. .|+++.|+ .+.......+.+ ....++.++++|+++.++++++++.+
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELK---APGAKITFIECDLSDPESIRALIEEVIKR 77 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHH---HTTSEEEEEESETTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 5899999999999999999999965 77888886 222222211112 12378899999999999999888766
Q ss_pred --CccEEEEcccccCchhhc----cChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRYAM----QNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~~~----~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~ 227 (424)
++|+||||||........ ++.+..+++|+.+...+.+++...+ ..+||++||....-. ...
T Consensus 78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~------------~~~ 144 (167)
T PF00106_consen 78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRG------------SPG 144 (167)
T ss_dssp HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSS------------STT
T ss_pred cccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccC------------CCC
Confidence 689999999987643222 2335799999999999999888844 349999999766532 134
Q ss_pred CChHHHHHHHHHHHHHHHHHHh
Q 042406 228 ASLYAATKKAGEAIAHAYNHIY 249 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~ 249 (424)
...|+.+|.+.+.+++.+++++
T Consensus 145 ~~~Y~askaal~~~~~~la~e~ 166 (167)
T PF00106_consen 145 MSAYSASKAALRGLTQSLAAEL 166 (167)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHhc
Confidence 5789999999999999998763
No 280
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.72 E-value=3.5e-16 Score=142.24 Aligned_cols=211 Identities=16% Similarity=0.145 Sum_probs=155.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
++|+||||+.+||..++..+..+|++|+++.|+.++..+..+...... ....|.+..+|+.|.+++..++++. .
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~-~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~ 112 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLT-QVEDVSYKSVDVIDYDSVSKVIEELRDLEGP 112 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhh-ccceeeEeccccccHHHHHHHHhhhhhccCC
Confidence 579999999999999999999999999999998877766655443321 2234789999999999999999987 6
Q ss_pred ccEEEEcccccCchhhccC----hHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcc-cCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRYAMQN----PNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSV-YGVNKKVPFSEKDRTD 225 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~----~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~v-yg~~~~~~~~e~~~~~ 225 (424)
+|.+|||||...+....+. .+..+++|..|+.|++.++... ....+|+.+||... ++-
T Consensus 113 ~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i------------- 179 (331)
T KOG1210|consen 113 IDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGI------------- 179 (331)
T ss_pred cceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCc-------------
Confidence 8999999998766544333 3568999999999988776443 21127888887433 331
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
...+.|+.+|.+...++..+.++. |+.++..-|+.+-.|+-.... ..+-....+. +.--+.+.
T Consensus 180 ~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En--------~tkP~~t~ii------~g~ss~~~ 245 (331)
T KOG1210|consen 180 YGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFEREN--------KTKPEETKII------EGGSSVIK 245 (331)
T ss_pred ccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCcccccc--------ccCchheeee------cCCCCCcC
Confidence 345889999999999999988764 899999999999999654321 1111111222 11223577
Q ss_pred HHHHHHHHHHHhhhcc
Q 042406 303 IDDIVKGCLAGLDTAK 318 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~ 318 (424)
-+++|++++.=+.+..
T Consensus 246 ~e~~a~~~~~~~~rg~ 261 (331)
T KOG1210|consen 246 CEEMAKAIVKGMKRGN 261 (331)
T ss_pred HHHHHHHHHhHHhhcC
Confidence 8999999997666543
No 281
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.72 E-value=1.9e-15 Score=141.86 Aligned_cols=224 Identities=23% Similarity=0.215 Sum_probs=166.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||||++|++++++|+++|++|+++.|+.+... ... .++++...|+.+.+.+...++++ |.++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~---------~~~-~~v~~~~~d~~~~~~l~~a~~G~--~~~~ 68 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAA---------ALA-GGVEVVLGDLRDPKSLVAGAKGV--DGVL 68 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHH---------hhc-CCcEEEEeccCCHhHHHHHhccc--cEEE
Confidence 57999999999999999999999999999999654221 112 78999999999999999999988 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
++.+... . .. ...........+..+++. .+.. +++++|....-. .....|..+|..+|
T Consensus 69 ~i~~~~~-~----~~-~~~~~~~~~~~~~a~~a~-~~~~-~~~~~s~~~~~~--------------~~~~~~~~~~~~~e 126 (275)
T COG0702 69 LISGLLD-G----SD-AFRAVQVTAVVRAAEAAG-AGVK-HGVSLSVLGADA--------------ASPSALARAKAAVE 126 (275)
T ss_pred EEecccc-c----cc-chhHHHHHHHHHHHHHhc-CCce-EEEEeccCCCCC--------------CCccHHHHHHHHHH
Confidence 9887643 1 11 223334444445555444 2333 788888755422 23478999999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
..+.+. |+.++++|+..+|...... ........+.+.... +....+++.++|++.++..++..+..
T Consensus 127 ~~l~~s----g~~~t~lr~~~~~~~~~~~-----~~~~~~~~~~~~~~~-----~~~~~~~i~~~d~a~~~~~~l~~~~~ 192 (275)
T COG0702 127 AALRSS----GIPYTTLRRAAFYLGAGAA-----FIEAAEAAGLPVIPR-----GIGRLSPIAVDDVAEALAAALDAPAT 192 (275)
T ss_pred HHHHhc----CCCeEEEecCeeeeccchh-----HHHHHHhhCCceecC-----CCCceeeeEHHHHHHHHHHHhcCCcc
Confidence 988886 9999999977776553321 122233334333332 23378999999999999999987752
Q ss_pred cCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccc
Q 042406 320 STGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET 363 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~ 363 (424)
.+++|.+++++..+..++.+.+....|++...
T Consensus 193 ------------~~~~~~l~g~~~~~~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 193 ------------AGRTYELAGPEALTLAELASGLDYTIGRPVGL 224 (275)
T ss_pred ------------cCcEEEccCCceecHHHHHHHHHHHhCCccee
Confidence 23899999998999999999999999988866
No 282
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=99.71 E-value=9.1e-16 Score=142.18 Aligned_cols=173 Identities=20% Similarity=0.205 Sum_probs=128.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch--hhhHHHHHhhhhcc-CCeEEEEccCCC-HHHHHHHhh
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--ETSLKKARKGLLER-AGVFVIDADIND-KSLLDKIFN 151 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~-~~v~~~~~Dl~d-~~~v~~~~~ 151 (424)
.+.+|+++||||+++||..+++.|+++|+.|+++.|..+.. +....... ... ..+.+..+|+++ .++++.+++
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dvs~~~~~v~~~~~ 78 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK---EAGGGRAAAVAADVSDDEESVEALVA 78 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH---hcCCCcEEEEEecCCCCHHHHHHHHH
Confidence 35789999999999999999999999999999998876542 11111111 111 367888999998 888887776
Q ss_pred cc-----CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 152 VV-----AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 152 ~~-----~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
.. ++|++|||||.... ....++.+..+.+|+.|...+.+++......++||++||.... ..
T Consensus 79 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~-------- 149 (251)
T COG1028 79 AAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG-------- 149 (251)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC--------
Confidence 55 48999999998542 1122344679999999988877754433222289999997765 31
Q ss_pred CCCCCC-CChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCC
Q 042406 222 DRTDQP-ASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGP 264 (424)
Q Consensus 222 ~~~~~~-~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~ 264 (424)
.+ ...|+.||++.+.+.+.++.+ .|++++.|.||.+-.+
T Consensus 150 ----~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~ 192 (251)
T COG1028 150 ----PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP 192 (251)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence 22 478999999999999999855 4899999999966544
No 283
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.69 E-value=8.4e-16 Score=141.65 Aligned_cols=207 Identities=14% Similarity=0.068 Sum_probs=140.7
Q ss_pred HHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--CccEEEEcccccCchhhcc
Q 042406 95 VSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--AFTHVMHLAAQAGVRYAMQ 172 (424)
Q Consensus 95 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--~~d~vi~~Ag~~~~~~~~~ 172 (424)
++++|+++|++|++++|+.+... ...++++|++|.++++++++.. ++|+||||||... ..
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~--------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~----~~ 62 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT--------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG----TA 62 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh--------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC----CC
Confidence 47899999999999999654310 1346889999999999999865 6899999999753 24
Q ss_pred ChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCC---------------CCCCCCCChHHHHHH
Q 042406 173 NPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEK---------------DRTDQPASLYAATKK 236 (424)
Q Consensus 173 ~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~---------------~~~~~~~~~Y~~sK~ 236 (424)
+.+..+++|+.++.++++++.+.. ...+||++||...|+.....+..+. ..+..+...|+.||.
T Consensus 63 ~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 142 (241)
T PRK12428 63 PVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKE 142 (241)
T ss_pred CHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHH
Confidence 568899999999999999886541 1248999999988863221111110 012245688999999
Q ss_pred HHHHHHHHHH-HH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHH
Q 042406 237 AGEAIAHAYN-HI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312 (424)
Q Consensus 237 ~~e~~~~~~~-~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 312 (424)
+.+.+++.++ .+ .|+++++|+||.+.++-.... ..............+ ...+...+|+|++++.
T Consensus 143 a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~----------~~~~~~pe~va~~~~~ 210 (241)
T PRK12428 143 ALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDF--RSMLGQERVDSDAKR----------MGRPATADEQAAVLVF 210 (241)
T ss_pred HHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccc--hhhhhhHhhhhcccc----------cCCCCCHHHHHHHHHH
Confidence 9999999888 44 489999999999998743210 000000000000000 1125678999999999
Q ss_pred HhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 313 GLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
++...... ..|+.+.+.+|
T Consensus 211 l~s~~~~~----------~~G~~i~vdgg 229 (241)
T PRK12428 211 LCSDAARW----------INGVNLPVDGG 229 (241)
T ss_pred HcChhhcC----------ccCcEEEecCc
Confidence 87544321 33466777655
No 284
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.66 E-value=3.3e-15 Score=129.60 Aligned_cols=199 Identities=19% Similarity=0.112 Sum_probs=136.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEe-CCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLD-NFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
.+.|+||||+.+||.-|+++|++. |-++++.. |+.+.+ ..+........++++.++.|+++.+++.++++++
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a---~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~i 79 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKA---ATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKI 79 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHh---hHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhh
Confidence 456999999999999999999987 55665554 434432 1111222224689999999999999998888776
Q ss_pred ----CccEEEEcccccCchhhccC-----hHHHHHHHHHHHHHHHHHH----HhcC---------CC-CeEEEecCCccc
Q 042406 154 ----AFTHVMHLAAQAGVRYAMQN-----PNSYVESNIAGFVNLLETC----KSSD---------PQ-PAIVWASSSSVY 210 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~~~~~-----~~~~~~~N~~g~~~ll~a~----~~~~---------~~-~~~v~~SS~~vy 210 (424)
+.|++|||||+...-..... ...++++|..|+..+.+++ ++.. +. ..||++||.+.-
T Consensus 80 Vg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s 159 (249)
T KOG1611|consen 80 VGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS 159 (249)
T ss_pred cccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence 57999999998654222222 2368999999865554432 3221 11 168888885432
Q ss_pred -CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCcee
Q 042406 211 -GVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRIT 286 (424)
Q Consensus 211 -g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 286 (424)
+.. ...+..+|.+||.+...+.+++.-+. ++-++.++||+|-..-+.
T Consensus 160 ~~~~----------~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg------------------- 210 (249)
T KOG1611|consen 160 IGGF----------RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG------------------- 210 (249)
T ss_pred cCCC----------CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-------------------
Confidence 111 22567899999999999999987553 688899999999754221
Q ss_pred EEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 287 VYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 287 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
.+ .-+.+++-+..++..+.+...
T Consensus 211 -------~~---a~ltveeSts~l~~~i~kL~~ 233 (249)
T KOG1611|consen 211 -------KK---AALTVEESTSKLLASINKLKN 233 (249)
T ss_pred -------CC---cccchhhhHHHHHHHHHhcCc
Confidence 11 145577788888877777654
No 285
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.65 E-value=7.8e-16 Score=131.68 Aligned_cols=166 Identities=17% Similarity=0.115 Sum_probs=123.4
Q ss_pred CCCeEEEEcC-CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 78 RGLTVLVTGA-AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 78 ~~~~vlItGg-~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
..|.|||||+ .|+||.+|+++|.+.|+.|+...|..+.-.. .....++..++.|+++++.+.++..++
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~--------L~~~~gl~~~kLDV~~~~~V~~v~~evr~~ 77 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQ--------LAIQFGLKPYKLDVSKPEEVVTVSGEVRAN 77 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhh--------HHHhhCCeeEEeccCChHHHHHHHHHHhhC
Confidence 4567888876 5899999999999999999999996543211 112357899999999999998877655
Q ss_pred ---CccEEEEcccccCc-hhhc---cChHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-RYAM---QNPNSYVESNIAGFVNLLETCKSS--DPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-~~~~---~~~~~~~~~N~~g~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
+.|+++||||..-. +..+ .+.+.+|++|+.|..+..++..+. ..+..||++.|..+|-.
T Consensus 78 ~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vp------------ 145 (289)
T KOG1209|consen 78 PDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVP------------ 145 (289)
T ss_pred CCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEec------------
Confidence 57999999997422 2222 223679999999977666655421 12338999999877752
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccC
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYG 263 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G 263 (424)
..-.+.|.+||++...+.+.+.-+ .|++++.+-+|.|-.
T Consensus 146 fpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T 187 (289)
T KOG1209|consen 146 FPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVAT 187 (289)
T ss_pred cchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceec
Confidence 133478999999999998888644 488888888887654
No 286
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.62 E-value=6.3e-14 Score=117.62 Aligned_cols=203 Identities=17% Similarity=0.173 Sum_probs=143.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|.|.||||-+|+.|+++.++|||+|+++.|++++.. ..+++..++.|+.|++++.+.+.+. |+||
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~-----------~~~~~~i~q~Difd~~~~a~~l~g~--DaVI 67 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLA-----------ARQGVTILQKDIFDLTSLASDLAGH--DAVI 67 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcc-----------ccccceeecccccChhhhHhhhcCC--ceEE
Confidence 78999999999999999999999999999999654211 1267889999999999999999977 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
..-+... .+.+... ......|++..+.+++. |++.+..++-...... . .--+.+..|...|..++..+|
T Consensus 68 sA~~~~~-----~~~~~~~---~k~~~~li~~l~~agv~-RllVVGGAGSL~id~g-~-rLvD~p~fP~ey~~~A~~~ae 136 (211)
T COG2910 68 SAFGAGA-----SDNDELH---SKSIEALIEALKGAGVP-RLLVVGGAGSLEIDEG-T-RLVDTPDFPAEYKPEALAQAE 136 (211)
T ss_pred EeccCCC-----CChhHHH---HHHHHHHHHHHhhcCCe-eEEEEcCccceEEcCC-c-eeecCCCCchhHHHHHHHHHH
Confidence 8766431 1111111 11256678888888876 8888877544322221 1 111223356667777888877
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
++..+..+.++.||.|.|...|-|+.+.+. ..-|+...+... .+ -++|+.+|.|.+++..++++..
T Consensus 137 -~L~~Lr~~~~l~WTfvSPaa~f~PGerTg~--------yrlggD~ll~n~--~G---~SrIS~aDYAiA~lDe~E~~~h 202 (211)
T COG2910 137 -FLDSLRAEKSLDWTFVSPAAFFEPGERTGN--------YRLGGDQLLVNA--KG---ESRISYADYAIAVLDELEKPQH 202 (211)
T ss_pred -HHHHHhhccCcceEEeCcHHhcCCccccCc--------eEeccceEEEcC--CC---ceeeeHHHHHHHHHHHHhcccc
Confidence 455666666799999999999999765442 233444444321 22 2699999999999999998875
Q ss_pred c
Q 042406 320 S 320 (424)
Q Consensus 320 ~ 320 (424)
.
T Consensus 203 ~ 203 (211)
T COG2910 203 I 203 (211)
T ss_pred c
Confidence 3
No 287
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.62 E-value=2.1e-14 Score=126.10 Aligned_cols=165 Identities=21% Similarity=0.207 Sum_probs=115.2
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
+++||||+|+||..+++.|+++|. +|+++.|+.............-......+.++++|++|++++.++++.. +
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 589999999999999999999985 7999999732111111112211123458999999999999999999876 5
Q ss_pred ccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc-ccCCCCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS-VYGVNKKVPFSEKDRTDQPAS 229 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~-vyg~~~~~~~~e~~~~~~~~~ 229 (424)
++.|||+||....... .++.+..+..-+.|+.+|.++....... .||.+||.+ ++|. ....
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~-~~i~~SSis~~~G~-------------~gq~ 147 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLD-FFILFSSISSLLGG-------------PGQS 147 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTS-EEEEEEEHHHHTT--------------TTBH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCC-eEEEECChhHhccC-------------cchH
Confidence 7899999998543211 2223567888999999999999887776 889989854 5664 4568
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCcEEEEEecc
Q 042406 230 LYAATKKAGEAIAHAYNHIYGLSITGLRFFT 260 (424)
Q Consensus 230 ~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~ 260 (424)
.|+++-...+.+++.... .|.++.+|.-+.
T Consensus 148 ~YaaAN~~lda~a~~~~~-~g~~~~sI~wg~ 177 (181)
T PF08659_consen 148 AYAAANAFLDALARQRRS-RGLPAVSINWGA 177 (181)
T ss_dssp HHHHHHHHHHHHHHHHHH-TTSEEEEEEE-E
T ss_pred hHHHHHHHHHHHHHHHHh-CCCCEEEEEccc
Confidence 999999999998887655 489988888654
No 288
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.58 E-value=4.3e-14 Score=163.21 Aligned_cols=173 Identities=17% Similarity=0.156 Sum_probs=132.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCch----------hh----------------------------
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYY----------ET---------------------------- 118 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~----------~~---------------------------- 118 (424)
+++++|||||+++||..++++|+++ |.+|++++|+.... ..
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence 5899999999999999999999998 69999999972100 00
Q ss_pred -----hHHHHHhh-hhccCCeEEEEccCCCHHHHHHHhhcc----CccEEEEcccccCch----hhccChHHHHHHHHHH
Q 042406 119 -----SLKKARKG-LLERAGVFVIDADINDKSLLDKIFNVV----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAG 184 (424)
Q Consensus 119 -----~~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~~~~----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g 184 (424)
........ ......+.++.+|++|.+++.++++.+ ++|.||||||+.... ...++.+..+++|+.|
T Consensus 2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813 2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence 00000000 012346889999999999999888765 589999999985432 2233456799999999
Q ss_pred HHHHHHHHHhcCCCCeEEEecCCcc-cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCcEEEEEecccc
Q 042406 185 FVNLLETCKSSDPQPAIVWASSSSV-YGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLRFFTVY 262 (424)
Q Consensus 185 ~~~ll~a~~~~~~~~~~v~~SS~~v-yg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~i~~~~vrp~~v~ 262 (424)
+.++++++.....+ +||++||... ||. .....|+.+|.+.+.+.+.++.++ ++++++|.||.+-
T Consensus 2156 ~~~Ll~al~~~~~~-~IV~~SSvag~~G~-------------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wd 2221 (2582)
T TIGR02813 2156 LLSLLAALNAENIK-LLALFSSAAGFYGN-------------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWD 2221 (2582)
T ss_pred HHHHHHHHHHhCCC-eEEEEechhhcCCC-------------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeec
Confidence 99999999876654 8999999654 442 345789999999999999988776 6899999999876
Q ss_pred CC
Q 042406 263 GP 264 (424)
Q Consensus 263 G~ 264 (424)
|+
T Consensus 2222 tg 2223 (2582)
T TIGR02813 2222 GG 2223 (2582)
T ss_pred CC
Confidence 64
No 289
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=99.57 E-value=2.5e-14 Score=130.57 Aligned_cols=172 Identities=17% Similarity=0.150 Sum_probs=130.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH----HHHHHhhccCc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS----LLDKIFNVVAF 155 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~----~v~~~~~~~~~ 155 (424)
+=.+|||||.+||++.+++|++||.+|+++.|+.++++...++..... ...+.++..|.++.+ .+.+.+++.++
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~--~vev~~i~~Dft~~~~~ye~i~~~l~~~~V 127 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKY--KVEVRIIAIDFTKGDEVYEKLLEKLAGLDV 127 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHh--CcEEEEEEEecCCCchhHHHHHHHhcCCce
Confidence 458999999999999999999999999999999988877666554432 256889999998655 47777777788
Q ss_pred cEEEEcccccC--chhhccCh----HHHHHHHHHHHHHHH----HHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 156 THVMHLAAQAG--VRYAMQNP----NSYVESNIAGFVNLL----ETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 156 d~vi~~Ag~~~--~~~~~~~~----~~~~~~N~~g~~~ll----~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
.++|||+|... +....+.+ ...+.+|+.++..+. .-|.+.+.+ .||++||.+..- +.
T Consensus 128 gILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G-~IvnigS~ag~~------------p~ 194 (312)
T KOG1014|consen 128 GILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKG-IIVNIGSFAGLI------------PT 194 (312)
T ss_pred EEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCc-eEEEeccccccc------------cC
Confidence 99999999876 22222222 346778888855544 444444443 899999976643 22
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCC
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWG 266 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~ 266 (424)
+-.+.|++||...+.+...+.+++ |+.+..+-|..|-++..
T Consensus 195 p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 195 PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence 446889999999999999888776 89999999999987643
No 290
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=99.55 E-value=4.1e-14 Score=122.23 Aligned_cols=272 Identities=16% Similarity=0.101 Sum_probs=174.5
Q ss_pred CCeEEEEcCCChhHHHHHH-----HHHhCC----CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH-HHHH
Q 042406 79 GLTVLVTGAAGFVGSHVSL-----ALKKRG----DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS-LLDK 148 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~-~v~~ 148 (424)
+++.++-+++|+|+..|.- ++-+.+ |.|+++.|.+... ++.+-..|..-.. ++.
T Consensus 12 sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~---------------ritw~el~~~Gip~sc~- 75 (315)
T KOG3019|consen 12 SRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA---------------RITWPELDFPGIPISCV- 75 (315)
T ss_pred cccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc---------------ccccchhcCCCCceehH-
Confidence 3456888999999988876 444444 8999999965421 2222222221100 111
Q ss_pred HhhccCccEEEEcccccCchhhccChHHHHHHHHHH-----HHHHHHHHHhcCCC-CeEEEecCCcccCCCCCCCCCCCC
Q 042406 149 IFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAG-----FVNLLETCKSSDPQ-PAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 149 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g-----~~~ll~a~~~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
+. +..+.+|+...--+ ....|+-|+.| |..|+++...+... +.+|.+|..++|-......++|++
T Consensus 76 --a~--vna~g~n~l~P~rR-----Wsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~ 146 (315)
T KOG3019|consen 76 --AG--VNAVGNNALLPIRR-----WSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKI 146 (315)
T ss_pred --HH--HhhhhhhccCchhh-----cCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEecccccccccccc
Confidence 11 13344454432212 23345555554 77888888776533 379999999999988777888887
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC--CCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP--DMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.. ..++....--++.|..++..++ .+++++||.|.|.|.++.. .|+++ -++-.|+++ |++++.++|
T Consensus 147 ~~-qgfd~~srL~l~WE~aA~~~~~--~~r~~~iR~GvVlG~gGGa~~~M~lp---F~~g~GGPl------GsG~Q~fpW 214 (315)
T KOG3019|consen 147 VH-QGFDILSRLCLEWEGAALKANK--DVRVALIRIGVVLGKGGGALAMMILP---FQMGAGGPL------GSGQQWFPW 214 (315)
T ss_pred cc-CChHHHHHHHHHHHHHhhccCc--ceeEEEEEEeEEEecCCcchhhhhhh---hhhccCCcC------CCCCeeeee
Confidence 65 5555555444455555544443 5899999999999987642 12111 122334443 789999999
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCC------C-C
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN------G-D 373 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~------~-~ 373 (424)
||++|++..+..+++++.-. ++.|-..+++++..||.+.+.+.++++.-+ |.|.. + +
T Consensus 215 IHv~DL~~li~~ale~~~v~-------------GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~---pvP~fvvqA~fG~e 278 (315)
T KOG3019|consen 215 IHVDDLVNLIYEALENPSVK-------------GVINGVAPNPVRNGEFCQQLGSALSRPSWL---PVPDFVVQALFGPE 278 (315)
T ss_pred eehHHHHHHHHHHHhcCCCC-------------ceecccCCCccchHHHHHHHHHHhCCCccc---CCcHHHHHHHhCcc
Confidence 99999999999999996543 799999999999999999999999988743 22210 1 1
Q ss_pred cccccCC-----hHHHHhHcCCcccC-CHHHHHHHHH
Q 042406 374 VQFTHAN-----ISLAQRELGYMPTT-DLETGLKKFV 404 (424)
Q Consensus 374 ~~~~~~d-----~s~~~~~LG~~p~~-~l~~~l~~~v 404 (424)
-...++. ..|+ .++||+.++ .+.+++++.+
T Consensus 279 rA~~vLeGqKV~Pqra-l~~Gf~f~yp~vk~Al~~i~ 314 (315)
T KOG3019|consen 279 RATVVLEGQKVLPQRA-LELGFEFKYPYVKDALRAIM 314 (315)
T ss_pred ceeEEeeCCcccchhH-hhcCceeechHHHHHHHHHh
Confidence 1112222 2344 348998876 4667776654
No 291
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.54 E-value=1.8e-14 Score=119.28 Aligned_cols=171 Identities=19% Similarity=0.206 Sum_probs=130.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+.++-..+||||.+++|+..++.|++.|+.|.++|-..++.....++ -..++.|..+|++++++++.++...
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vake------lg~~~vf~padvtsekdv~aala~ak~ 79 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKE------LGGKVVFTPADVTSEKDVRAALAKAKA 79 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHH------hCCceEEeccccCcHHHHHHHHHHHHh
Confidence 45777899999999999999999999999999999866544333222 2357899999999999999988765
Q ss_pred ---CccEEEEcccccCc----------hhhccChHHHHHHHHHHHHHHHHHHHh----c-----CCCCeEEEecCCcccC
Q 042406 154 ---AFTHVMHLAAQAGV----------RYAMQNPNSYVESNIAGFVNLLETCKS----S-----DPQPAIVWASSSSVYG 211 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~----------~~~~~~~~~~~~~N~~g~~~ll~a~~~----~-----~~~~~~v~~SS~~vyg 211 (424)
+.|.++||||+... ....++....+++|+.||+|+++.... + +-...+|.+.|...|.
T Consensus 80 kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafd 159 (260)
T KOG1199|consen 80 KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFD 159 (260)
T ss_pred hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeec
Confidence 68999999998532 112334567889999999999875421 1 2222678888877776
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCC
Q 042406 212 VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGP 264 (424)
Q Consensus 212 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~ 264 (424)
.+ .....|++||.+.-.+..-+++.. |+|+..|-||.+-.|
T Consensus 160 gq------------~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tp 203 (260)
T KOG1199|consen 160 GQ------------TGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTP 203 (260)
T ss_pred Cc------------cchhhhhcccCceEeeechhhhhcccCceEEEeecccccCCh
Confidence 43 345889999998876666555543 899999999987666
No 292
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.41 E-value=7.8e-12 Score=120.02 Aligned_cols=216 Identities=20% Similarity=0.144 Sum_probs=131.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHH-HHHHhhc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSL-LDKIFNV 152 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-v~~~~~~ 152 (424)
..+.+.++|+|+||+|.+|+.+++.|+++|+.|+++.|+.+....... ..........+..|.....+ ...+...
T Consensus 74 ~~~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~----~~~~d~~~~~v~~~~~~~~d~~~~~~~~ 149 (411)
T KOG1203|consen 74 NNSKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG----VFFVDLGLQNVEADVVTAIDILKKLVEA 149 (411)
T ss_pred CCCCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc----ccccccccceeeeccccccchhhhhhhh
Confidence 345677899999999999999999999999999999997654333222 12233455555556554433 3334433
Q ss_pred cC--ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCCh
Q 042406 153 VA--FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL 230 (424)
Q Consensus 153 ~~--~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~ 230 (424)
+. ..+++-++|-.+.. + |...-..+...|++|+++||+..+++ |||++||.+.-..+.. .+.......
T Consensus 150 ~~~~~~~v~~~~ggrp~~--e-d~~~p~~VD~~g~knlvdA~~~aGvk-~~vlv~si~~~~~~~~------~~~~~~~~~ 219 (411)
T KOG1203|consen 150 VPKGVVIVIKGAGGRPEE--E-DIVTPEKVDYEGTKNLVDACKKAGVK-RVVLVGSIGGTKFNQP------PNILLLNGL 219 (411)
T ss_pred ccccceeEEecccCCCCc--c-cCCCcceecHHHHHHHHHHHHHhCCc-eEEEEEeecCcccCCC------chhhhhhhh
Confidence 32 34566665543211 1 22334568889999999999999997 9999988655322110 000000123
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHH
Q 042406 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
+-.+|+.+|.++. +.|+++++|||+...-...... .......-..+ ..+..--.+.-.|+|+.+
T Consensus 220 ~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~~~~~~--------~~~~~~~~~~~----~~~~~~~~i~r~~vael~ 283 (411)
T KOG1203|consen 220 VLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQDTGGQR--------EVVVDDEKELL----TVDGGAYSISRLDVAELV 283 (411)
T ss_pred hhHHHHhHHHHHH----hcCCCcEEEeccccccCCCCcc--------eecccCccccc----cccccceeeehhhHHHHH
Confidence 3467777777665 4499999999998765433211 00111111111 111111366778999999
Q ss_pred HHHhhhccc
Q 042406 311 LAGLDTAKK 319 (424)
Q Consensus 311 ~~~~~~~~~ 319 (424)
+.++..+..
T Consensus 284 ~~all~~~~ 292 (411)
T KOG1203|consen 284 AKALLNEAA 292 (411)
T ss_pred HHHHhhhhh
Confidence 998887763
No 293
>PRK06720 hypothetical protein; Provisional
Probab=99.33 E-value=3e-11 Score=104.54 Aligned_cols=88 Identities=15% Similarity=0.213 Sum_probs=68.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+++||..+++.|+++|++|++++|+.+........... ....+.++.+|++|.+++.++++..
T Consensus 13 ~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~v~~~~~ 89 (169)
T PRK06720 13 KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITN---LGGEALFVSYDMEKQGDWQRVISITLN 89 (169)
T ss_pred ccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999875433222222211 1245678899999999988876543
Q ss_pred ---CccEEEEcccccC
Q 042406 154 ---AFTHVMHLAAQAG 166 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~ 166 (424)
++|++|||||...
T Consensus 90 ~~G~iDilVnnAG~~~ 105 (169)
T PRK06720 90 AFSRIDMLFQNAGLYK 105 (169)
T ss_pred HcCCCCEEEECCCcCC
Confidence 6899999999755
No 294
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=99.26 E-value=6.1e-11 Score=104.53 Aligned_cols=182 Identities=15% Similarity=0.117 Sum_probs=128.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-----eEEEEeCCCCchhhhHHHHHhhhhc-cCCeEEEEccCCCHHHHHHHhhc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-----GVLGLDNFNNYYETSLKKARKGLLE-RAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
.|.++|||++++||..|+.+|++... .+++.+|+-++.++.......-... .-.++++.+|+++..++.++-++
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d 82 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD 82 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence 46799999999999999999999864 4778899988887776665543221 34689999999999988877766
Q ss_pred c-----CccEEEEcccccCch-------------------------------hhccChHHHHHHHHHHHHHHHHHHHh--
Q 042406 153 V-----AFTHVMHLAAQAGVR-------------------------------YAMQNPNSYVESNIAGFVNLLETCKS-- 194 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~-------------------------------~~~~~~~~~~~~N~~g~~~ll~a~~~-- 194 (424)
. +.|.|+-|||++..+ .+.++-...|+.|+.|...++.....
T Consensus 83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll 162 (341)
T KOG1478|consen 83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL 162 (341)
T ss_pred HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence 5 579999999986431 01122235799999998877665432
Q ss_pred -cCCCCeEEEecCCcccCCCCCCCCC-CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCC
Q 042406 195 -SDPQPAIVWASSSSVYGVNKKVPFS-EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGP 264 (424)
Q Consensus 195 -~~~~~~~v~~SS~~vyg~~~~~~~~-e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~ 264 (424)
++..+.+|++||-..=- ..++ |+-.......+|..||.+.+.+-....+.. |+.-.++.||.....
T Consensus 163 ~~~~~~~lvwtSS~~a~k----k~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~ 233 (341)
T KOG1478|consen 163 CHSDNPQLVWTSSRMARK----KNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN 233 (341)
T ss_pred hcCCCCeEEEEeeccccc----ccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence 23234899999954411 1111 111122455789999999998877776543 677788888876543
No 295
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=99.24 E-value=1.3e-10 Score=101.22 Aligned_cols=223 Identities=15% Similarity=0.054 Sum_probs=152.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
...++.|++||.|.++.+.....|+.|.++.|+..+. . .......+.++++|.-...-........ ..++
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~------~--l~sw~~~vswh~gnsfssn~~k~~l~g~--t~v~ 122 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQ------T--LSSWPTYVSWHRGNSFSSNPNKLKLSGP--TFVY 122 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcc------h--hhCCCcccchhhccccccCcchhhhcCC--cccH
Confidence 3579999999999999999999999999999965421 1 1112346777888877655555555544 7788
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
-+++-.+ ....+..+|-....+.++++.+.|++ +|+|+|. .-||.. +..+ ..|-.+|.++|
T Consensus 123 e~~ggfg------n~~~m~~ing~ani~a~kaa~~~gv~-~fvyISa-~d~~~~----------~~i~-rGY~~gKR~AE 183 (283)
T KOG4288|consen 123 EMMGGFG------NIILMDRINGTANINAVKAAAKAGVP-RFVYISA-HDFGLP----------PLIP-RGYIEGKREAE 183 (283)
T ss_pred HHhcCcc------chHHHHHhccHhhHHHHHHHHHcCCc-eEEEEEh-hhcCCC----------Cccc-hhhhccchHHH
Confidence 7777533 44567788888888899999999986 9999995 333321 1122 47889999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCC-----cHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHh
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDM-----AYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGL 314 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 314 (424)
.-+.. .++.+-.++|||.+||...-.+. ....-+..+.+...-++-..+--+......+.++++|.+.+.++
T Consensus 184 ~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai 260 (283)
T KOG4288|consen 184 AELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAI 260 (283)
T ss_pred HHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhc
Confidence 75554 34688899999999997432221 11222333333332111111124577888999999999999999
Q ss_pred hhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHH
Q 042406 315 DTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEK 355 (424)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~ 355 (424)
+++. |. ..+++.|+.++..+
T Consensus 261 ~dp~-----------------f~----Gvv~i~eI~~~a~k 280 (283)
T KOG4288|consen 261 EDPD-----------------FK----GVVTIEEIKKAAHK 280 (283)
T ss_pred cCCC-----------------cC----ceeeHHHHHHHHHH
Confidence 9876 32 24777777766544
No 296
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.21 E-value=2.6e-11 Score=105.54 Aligned_cols=164 Identities=19% Similarity=0.141 Sum_probs=110.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEE--------EccCCCHHHHHHH
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI--------DADINDKSLLDKI 149 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~--------~~Dl~d~~~v~~~ 149 (424)
.++.+||||++.+||..++..+.+++.+.....++... . ..+++.+. .+|++....+.+.
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~---------a---~~~~L~v~~gd~~v~~~g~~~e~~~l~al 72 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLL---------A---ELEGLKVAYGDDFVHVVGDITEEQLLGAL 72 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccc---------c---cccceEEEecCCcceechHHHHHHHHHHH
Confidence 35679999999999999999999998654443332111 1 12233333 3444444433333
Q ss_pred hhcc-----CccEEEEcccccCchh--h--ccC---hHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCC
Q 042406 150 FNVV-----AFTHVMHLAAQAGVRY--A--MQN---PNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVN 213 (424)
Q Consensus 150 ~~~~-----~~d~vi~~Ag~~~~~~--~--~~~---~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~ 213 (424)
++.. +-|+||||||....-. . ..| ...++++|+.....|...+ ++..+.+-+|++||.+..-
T Consensus 73 ~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~-- 150 (253)
T KOG1204|consen 73 REAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVR-- 150 (253)
T ss_pred HhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhc--
Confidence 3322 5799999999865421 1 122 3569999999877665544 3443345799999966542
Q ss_pred CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH-h-CCcEEEEEeccccCCC
Q 042406 214 KKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI-Y-GLSITGLRFFTVYGPW 265 (424)
Q Consensus 214 ~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~-~i~~~~vrp~~v~G~~ 265 (424)
+...+..||.+|++-+.+++.++.+ . ++++..++||.|-.+-
T Consensus 151 ----------p~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~m 194 (253)
T KOG1204|consen 151 ----------PFSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQM 194 (253)
T ss_pred ----------cccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchh
Confidence 2256789999999999999998754 3 8999999999987653
No 297
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=99.19 E-value=4.4e-09 Score=91.94 Aligned_cols=229 Identities=12% Similarity=0.088 Sum_probs=145.1
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.++||++||+|-. ..|+..|++.|.++|+++......+ +......+...+ ...-.++.||+++.+++.++|+.+
T Consensus 3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~---~~s~~v~~cDV~~d~~i~~~f~~i 78 (259)
T COG0623 3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEE---LGSDLVLPCDVTNDESIDALFATI 78 (259)
T ss_pred ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhh---ccCCeEEecCCCCHHHHHHHHHHH
Confidence 4789999999964 5899999999999999988887644 222222222221 123468999999999999999877
Q ss_pred -----CccEEEEcccccCchhhc--------cChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRYAM--------QNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~~~--------~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|.|+|+.|...-.... +.....+++.......++++++.... +..+|-+|= +|...
T Consensus 79 ~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY---lgs~r----- 150 (259)
T COG0623 79 KKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY---LGSER----- 150 (259)
T ss_pred HHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe---cccee-----
Confidence 689999999986532211 12233555555556666776665321 225554442 22110
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.-+.-+.-+..|++.|.-++-++... |+|++.|.-|.|=.--...=..+..++.......|+
T Consensus 151 ----~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl----------- 215 (259)
T COG0623 151 ----VVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPL----------- 215 (259)
T ss_pred ----ecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCc-----------
Confidence 11233678999999999999988665 789998887765321111000122333333332222
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+-.+.++||....+.++...... +.|++.++.+|-
T Consensus 216 -~r~vt~eeVG~tA~fLlSdLssg----------iTGei~yVD~G~ 250 (259)
T COG0623 216 -RRNVTIEEVGNTAAFLLSDLSSG----------ITGEIIYVDSGY 250 (259)
T ss_pred -cCCCCHHHhhhhHHHHhcchhcc----------cccceEEEcCCc
Confidence 22566899999988888766543 455888887764
No 298
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=99.17 E-value=1.1e-10 Score=97.51 Aligned_cols=158 Identities=15% Similarity=0.092 Sum_probs=120.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+.+|.++|.||||-.|+.+.+++++.+- +|+++.|.+. ........+.....|....++....+++.
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~----------~d~at~k~v~q~~vDf~Kl~~~a~~~qg~ 84 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL----------PDPATDKVVAQVEVDFSKLSQLATNEQGP 84 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccC----------CCccccceeeeEEechHHHHHHHhhhcCC
Confidence 46788899999999999999999999983 8999988431 11113356677778887777777777755
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHH
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAA 233 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~ 233 (424)
|+.|++-|..... ...+..+.+...-...++++|++.|++ +|+.+||.+.-- ...-.|-.
T Consensus 85 --dV~FcaLgTTRgk---aGadgfykvDhDyvl~~A~~AKe~Gck-~fvLvSS~GAd~--------------sSrFlY~k 144 (238)
T KOG4039|consen 85 --DVLFCALGTTRGK---AGADGFYKVDHDYVLQLAQAAKEKGCK-TFVLVSSAGADP--------------SSRFLYMK 144 (238)
T ss_pred --ceEEEeecccccc---cccCceEeechHHHHHHHHHHHhCCCe-EEEEEeccCCCc--------------ccceeeee
Confidence 9999998865432 224556677777788899999999987 999999977621 33456889
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCC
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWG 266 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~ 266 (424)
.|-..|.-+.++.-+ ++.|+|||.+.|...
T Consensus 145 ~KGEvE~~v~eL~F~---~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 145 MKGEVERDVIELDFK---HIIILRPGPLLGERT 174 (238)
T ss_pred ccchhhhhhhhcccc---EEEEecCcceecccc
Confidence 999999988887422 689999999999643
No 299
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=99.10 E-value=8.1e-09 Score=98.89 Aligned_cols=175 Identities=16% Similarity=0.042 Sum_probs=109.0
Q ss_pred CCCCeEEEEcCCChhHHH--HHHHHHhCCCeEEEEeCCCCchhh-----------hHHHHHhhhhccCCeEEEEccCCCH
Q 042406 77 TRGLTVLVTGAAGFVGSH--VSLALKKRGDGVLGLDNFNNYYET-----------SLKKARKGLLERAGVFVIDADINDK 143 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~Dl~d~ 143 (424)
..+|++|||||+++||.+ +++.| ++|++|+++++..+.... ...+.. . .....+..+.+|+++.
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a-~-~~G~~a~~i~~DVss~ 115 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFA-K-AAGLYAKSINGDAFSD 115 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHH-H-hcCCceEEEEcCCCCH
Confidence 457899999999999999 89999 999999999864322111 011111 1 1123467889999999
Q ss_pred HHHHHHhhcc-----CccEEEEcccccCchh------------------h------------------ccChHHHHHHHH
Q 042406 144 SLLDKIFNVV-----AFTHVMHLAAQAGVRY------------------A------------------MQNPNSYVESNI 182 (424)
Q Consensus 144 ~~v~~~~~~~-----~~d~vi~~Ag~~~~~~------------------~------------------~~~~~~~~~~N~ 182 (424)
+++.++++.+ ++|+||||+|...-.. . ..+.+...-+.+
T Consensus 116 E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~v 195 (398)
T PRK13656 116 EIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKV 195 (398)
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHh
Confidence 9998888765 6899999999752110 0 000011233455
Q ss_pred HHHHHHH---HHHHhcC---CCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcE
Q 042406 183 AGFVNLL---ETCKSSD---PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSI 253 (424)
Q Consensus 183 ~g~~~ll---~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~ 253 (424)
+|..... ++....+ .+.++|-+|. +|.... .+......-|.+|.+.|..++.++.+. |+++
T Consensus 196 Mggedw~~Wi~al~~a~lla~g~~~va~TY---~G~~~t-------~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~gira 265 (398)
T PRK13656 196 MGGEDWELWIDALDEAGVLAEGAKTVAYSY---IGPELT-------HPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDA 265 (398)
T ss_pred hccchHHHHHHHHHhcccccCCcEEEEEec---CCccee-------ecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEE
Confidence 5542221 2222221 1225666654 222111 111122456899999999999998765 7899
Q ss_pred EEEEeccccCC
Q 042406 254 TGLRFFTVYGP 264 (424)
Q Consensus 254 ~~vrp~~v~G~ 264 (424)
.++-++.+...
T Consensus 266 n~i~~g~~~T~ 276 (398)
T PRK13656 266 YVSVLKAVVTQ 276 (398)
T ss_pred EEEecCcccch
Confidence 99988887654
No 300
>PTZ00325 malate dehydrogenase; Provisional
Probab=99.07 E-value=1.2e-09 Score=103.65 Aligned_cols=178 Identities=19% Similarity=0.146 Sum_probs=123.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
..++++|.|+|++|.||..++..|+.++ .+++++|+.. .......... ... .....+.+|+.++.+.+++.
T Consensus 5 ~~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~---~~~--~~~v~~~td~~~~~~~l~ga 77 (321)
T PTZ00325 5 ALKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSH---IDT--PAKVTGYADGELWEKALRGA 77 (321)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--Ccccccchhh---cCc--CceEEEecCCCchHHHhCCC
Confidence 4567899999999999999999999665 6899999821 1110001110 011 23345666666667788877
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCC--CCCCCCCCCCCCChH
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKV--PFSEKDRTDQPASLY 231 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~--~~~e~~~~~~~~~~Y 231 (424)
|+||++||.... ...+....+..|+..+.+++++++++++. ++|+++|-.+-....-. ...+.. ..+|...|
T Consensus 78 --DvVVitaG~~~~--~~~tR~dll~~N~~i~~~i~~~i~~~~~~-~iviv~SNPvdv~~~~~~~~~~~~s-g~p~~~vi 151 (321)
T PTZ00325 78 --DLVLICAGVPRK--PGMTRDDLFNTNAPIVRDLVAAVASSAPK-AIVGIVSNPVNSTVPIAAETLKKAG-VYDPRKLF 151 (321)
T ss_pred --CEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEecCcHHHHHHHHHhhhhhcc-CCChhhee
Confidence 999999997432 12345788999999999999999999987 89999985553211000 001111 22556678
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 232 AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 232 ~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
|.+-+..-++-..+++..++....|+ ++|+|..+.
T Consensus 152 G~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 152 GVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred echhHHHHHHHHHHHHHhCcChhheE-EEEEeecCC
Confidence 87767777777778888899989998 889998665
No 301
>PRK08309 short chain dehydrogenase; Provisional
Probab=99.00 E-value=2.6e-09 Score=93.03 Aligned_cols=104 Identities=17% Similarity=0.170 Sum_probs=76.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
|+++||||+|++|. +++.|+++|++|++++|+.+...... ........+.++.+|++|.+++.+++++. +
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~----~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~ 75 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVK----RESTTPESITPLPLDYHDDDALKLAIKSTIEKNGP 75 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHH----HHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 67999999987765 99999999999999998654322211 11112346889999999999999888765 5
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCC---CeEEEecC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ---PAIVWASS 206 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~---~~~v~~SS 206 (424)
+|++|+.+= +.++.++..+|++.++. .+|+++=.
T Consensus 76 id~lv~~vh------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~g 112 (177)
T PRK08309 76 FDLAVAWIH------------------SSAKDALSVVCRELDGSSETYRLFHVLG 112 (177)
T ss_pred CeEEEEecc------------------ccchhhHHHHHHHHccCCCCceEEEEeC
Confidence 688887642 23578899999998863 15777654
No 302
>PLN00106 malate dehydrogenase
Probab=98.96 E-value=5.1e-09 Score=99.52 Aligned_cols=176 Identities=18% Similarity=0.111 Sum_probs=119.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
..++|.|+|++|.||..++..|+.++ .+++++|++... .... + +.+........++.+.+++.+.+++.
T Consensus 17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~-g~a~-----D-l~~~~~~~~i~~~~~~~d~~~~l~~a-- 87 (323)
T PLN00106 17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTP-GVAA-----D-VSHINTPAQVRGFLGDDQLGDALKGA-- 87 (323)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCC-eeEc-----h-hhhCCcCceEEEEeCCCCHHHHcCCC--
Confidence 44689999999999999999999776 489999986511 1000 0 00011112233544445577888887
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC--CCCCCCCCCCCCCCCCChHHH
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV--NKKVPFSEKDRTDQPASLYAA 233 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~--~~~~~~~e~~~~~~~~~~Y~~ 233 (424)
|+|||+||....+ ..+.++.+..|...+.++++.++++++. .+|+++|--+=+. ........ ....+|...||.
T Consensus 88 DiVVitAG~~~~~--g~~R~dll~~N~~i~~~i~~~i~~~~p~-aivivvSNPvD~~~~i~t~~~~~-~s~~p~~~viG~ 163 (323)
T PLN00106 88 DLVIIPAGVPRKP--GMTRDDLFNINAGIVKTLCEAVAKHCPN-ALVNIISNPVNSTVPIAAEVLKK-AGVYDPKKLFGV 163 (323)
T ss_pred CEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCC-eEEEEeCCCccccHHHHHHHHHH-cCCCCcceEEEE
Confidence 9999999985432 2456789999999999999999999976 6777776322100 00000001 112256678999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
+++..+++-..+++..|+....|+ +.|+|..+.
T Consensus 164 ~~LDs~Rl~~~lA~~lgv~~~~V~-~~ViGeHg~ 196 (323)
T PLN00106 164 TTLDVVRANTFVAEKKGLDPADVD-VPVVGGHAG 196 (323)
T ss_pred ecchHHHHHHHHHHHhCCChhheE-EEEEEeCCC
Confidence 999999999999999999988885 667776543
No 303
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.79 E-value=4.1e-08 Score=94.51 Aligned_cols=98 Identities=24% Similarity=0.222 Sum_probs=78.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
+|+|||.|+ |+||+.++..|+++| .+|++.+|+.+.... .......+++..++|+.|.+++.+++++. |+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~------i~~~~~~~v~~~~vD~~d~~al~~li~~~--d~ 71 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCAR------IAELIGGKVEALQVDAADVDALVALIKDF--DL 71 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHH------HHhhccccceeEEecccChHHHHHHHhcC--CE
Confidence 578999999 999999999999999 899999997543222 22223348999999999999999999987 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
|||++.... ..+++++|.++++ ++|=+|
T Consensus 72 VIn~~p~~~------------------~~~i~ka~i~~gv--~yvDts 99 (389)
T COG1748 72 VINAAPPFV------------------DLTILKACIKTGV--DYVDTS 99 (389)
T ss_pred EEEeCCchh------------------hHHHHHHHHHhCC--CEEEcc
Confidence 999986532 2367888888886 466554
No 304
>PRK09620 hypothetical protein; Provisional
Probab=98.77 E-value=2.1e-08 Score=90.85 Aligned_cols=85 Identities=18% Similarity=0.230 Sum_probs=61.4
Q ss_pred CCCCeEEEEcCC----------------ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccC
Q 042406 77 TRGLTVLVTGAA----------------GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140 (424)
Q Consensus 77 ~~~~~vlItGg~----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl 140 (424)
+.||+||||+|. ||+|.+|+++|+++|++|+++++....... .......+..+.+|.
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~-------~~~~~~~~~~V~s~~ 73 (229)
T PRK09620 1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN-------DINNQLELHPFEGII 73 (229)
T ss_pred CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc-------ccCCceeEEEEecHH
Confidence 368999999986 999999999999999999999874321100 000122344566644
Q ss_pred CCHHHHHHHhhccCccEEEEcccccCch
Q 042406 141 NDKSLLDKIFNVVAFTHVMHLAAQAGVR 168 (424)
Q Consensus 141 ~d~~~v~~~~~~~~~d~vi~~Ag~~~~~ 168 (424)
...+.+.+++...++|+|||+|++.+..
T Consensus 74 d~~~~l~~~~~~~~~D~VIH~AAvsD~~ 101 (229)
T PRK09620 74 DLQDKMKSIITHEKVDAVIMAAAGSDWV 101 (229)
T ss_pred HHHHHHHHHhcccCCCEEEECcccccee
Confidence 4456888888766789999999996643
No 305
>PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A ....
Probab=98.72 E-value=1.9e-08 Score=70.92 Aligned_cols=60 Identities=32% Similarity=0.419 Sum_probs=40.5
Q ss_pred HHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 352 LLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 352 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
.+++++|.++++.+.+ .+++|...++.|.+|++++|||+|+++|+++|+++.+|++++-.
T Consensus 1 A~e~vtG~~i~~~~~~-rR~GD~~~~~Ad~~kA~~~LgW~p~~~L~~~i~~~w~W~~~np~ 60 (62)
T PF13950_consen 1 AFEKVTGKKIPVEYAP-RRPGDPAHLVADISKAREELGWKPKYSLEDMIRDAWNWQKKNPN 60 (62)
T ss_dssp HHHHHHTS---EEEE----TT--SEE-B--HHHHHHC----SSSHHHHHHHHHHHHHHSTT
T ss_pred CcHHHHCCCCCceECC-CCCCchhhhhCCHHHHHHHhCCCcCCCHHHHHHHHHHHHHHCcC
Confidence 3678899999988776 57999999999999999999999999999999999999988643
No 306
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.68 E-value=4.3e-07 Score=86.91 Aligned_cols=174 Identities=13% Similarity=0.096 Sum_probs=105.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-------CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG-------DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
.+|+||||+|+||.+++..|+..+ .+|+++|++.+.... .....+.. . .......|+....++.+.+++
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~--~g~~~Dl~-d-~~~~~~~~~~~~~~~~~~l~~ 78 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKAL--EGVVMELQ-D-CAFPLLKSVVATTDPEEAFKD 78 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccc--cceeeehh-h-ccccccCCceecCCHHHHhCC
Confidence 369999999999999999999854 589999995431000 00000000 0 000112344445667788887
Q ss_pred cCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCc---ccCCCCCCCCCCCCCCCCCC
Q 042406 153 VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSS---VYGVNKKVPFSEKDRTDQPA 228 (424)
Q Consensus 153 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~---vyg~~~~~~~~e~~~~~~~~ 228 (424)
+ |+|||+||.... ...+....+..|+.-...+.+...++. ....+|.+|... .|- ..+.....++.
T Consensus 79 a--DiVI~tAG~~~~--~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~------~~k~~~~~~~~ 148 (325)
T cd01336 79 V--DVAILVGAMPRK--EGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALI------LLKYAPSIPKE 148 (325)
T ss_pred C--CEEEEeCCcCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHH------HHHHcCCCCHH
Confidence 7 999999998543 234568899999999999999888884 454677666411 000 00000000111
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
..=..+.+..-++-..+++..++....|+-..|+|..+.
T Consensus 149 ~ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeHG~ 187 (325)
T cd01336 149 NFTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNHSS 187 (325)
T ss_pred HEEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcCCC
Confidence 111123334445555566667888888888889997665
No 307
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.59 E-value=6.5e-07 Score=85.47 Aligned_cols=187 Identities=14% Similarity=0.122 Sum_probs=122.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEeCCCCc--hhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHH
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD-------GVLGLDNFNNY--YETSLKKARKGL-LERAGVFVIDADINDKSLLDKI 149 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~ 149 (424)
++|.|+|++|.||..++..|+.+|. +++++|+..+. +........... ....++.+. -.+ .+.
T Consensus 3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~---~~~----~~~ 75 (322)
T cd01338 3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT---DDP----NVA 75 (322)
T ss_pred eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe---cCc----HHH
Confidence 5799999999999999999998874 79999985432 222111111110 000122221 122 455
Q ss_pred hhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCc---ccCCCCCCCCCCCCCCC
Q 042406 150 FNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSS---VYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 150 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~---vyg~~~~~~~~e~~~~~ 225 (424)
+++. |+||.+||.... ...+..+.+..|..-...+.+...+++. ...+|.+|... .|-.. ......
T Consensus 76 ~~da--DivvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~------k~sg~~ 145 (322)
T cd01338 76 FKDA--DWALLVGAKPRG--PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAM------KNAPDI 145 (322)
T ss_pred hCCC--CEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHH------HHcCCC
Confidence 6666 999999997432 2345678899999999999999998884 55677776411 11000 000012
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCce
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRI 285 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~ 285 (424)
++...||.+++..+++...+++.+|++...+|..+|||+.+. ..++.+-.....|.++
T Consensus 146 p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG~--s~vp~~S~~~v~g~pl 203 (322)
T cd01338 146 PPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHSP--TQYPDFTNATIGGKPA 203 (322)
T ss_pred ChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCcc--cEEEehhhcEECCEeH
Confidence 455789999999999999999999999999999999999754 2333333333444443
No 308
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.55 E-value=4.1e-07 Score=82.70 Aligned_cols=72 Identities=14% Similarity=0.145 Sum_probs=49.0
Q ss_pred EEE-cCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC--HHHHHHHhhccCccEEE
Q 042406 83 LVT-GAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND--KSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 83 lIt-Gg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~v~~~~~~~~~d~vi 159 (424)
.|| .+||++|.+|+++|+++|++|++++|.... ......++.++.++..+ .+.+.+.+.+ +|+||
T Consensus 19 ~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~----------~~~~~~~v~~i~v~s~~~m~~~l~~~~~~--~DivI 86 (229)
T PRK06732 19 GITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAV----------KPEPHPNLSIIEIENVDDLLETLEPLVKD--HDVLI 86 (229)
T ss_pred eecCccchHHHHHHHHHHHhCCCEEEEEECcccc----------cCCCCCCeEEEEEecHHHHHHHHHHHhcC--CCEEE
Confidence 444 457889999999999999999999874321 00012356666654332 2455556654 49999
Q ss_pred EcccccC
Q 042406 160 HLAAQAG 166 (424)
Q Consensus 160 ~~Ag~~~ 166 (424)
||||+..
T Consensus 87 h~AAvsd 93 (229)
T PRK06732 87 HSMAVSD 93 (229)
T ss_pred eCCccCC
Confidence 9999865
No 309
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.47 E-value=6.1e-07 Score=87.94 Aligned_cols=79 Identities=23% Similarity=0.225 Sum_probs=62.0
Q ss_pred CCCCCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEc
Q 042406 75 RSTRGLTVLVTGA----------------AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138 (424)
Q Consensus 75 ~~~~~~~vlItGg----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~ 138 (424)
..++||+|+|||| +|.+|.+++++|+++|++|++++++.+. . ...+ +..+
T Consensus 184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~-----------~~~~--~~~~ 249 (399)
T PRK05579 184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P-----------TPAG--VKRI 249 (399)
T ss_pred cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c-----------CCCC--cEEE
Confidence 4578999999999 8889999999999999999999985421 0 0112 3467
Q ss_pred cCCCHHHHHHHhhcc--CccEEEEcccccCc
Q 042406 139 DINDKSLLDKIFNVV--AFTHVMHLAAQAGV 167 (424)
Q Consensus 139 Dl~d~~~v~~~~~~~--~~d~vi~~Ag~~~~ 167 (424)
|+++.+++.+++.+. ++|++|||||+...
T Consensus 250 dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~ 280 (399)
T PRK05579 250 DVESAQEMLDAVLAALPQADIFIMAAAVADY 280 (399)
T ss_pred ccCCHHHHHHHHHHhcCCCCEEEEccccccc
Confidence 999998888777542 57999999998654
No 310
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.45 E-value=9.9e-07 Score=87.08 Aligned_cols=76 Identities=29% Similarity=0.315 Sum_probs=57.6
Q ss_pred EEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|.|| |++|+.+++.|++++. +|++.+|+.++...... .....++.++++|+.|.+++.+++++. |+||
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~-----~~~~~~~~~~~~d~~~~~~l~~~~~~~--dvVi 72 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAE-----KLLGDRVEAVQVDVNDPESLAELLRGC--DVVI 72 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-------TTTTEEEEE--TTTHHHHHHHHTTS--SEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHh-----hccccceeEEEEecCCHHHHHHHHhcC--CEEE
Confidence 789999 9999999999999974 89999996543322211 114568999999999999999999988 9999
Q ss_pred Eccccc
Q 042406 160 HLAAQA 165 (424)
Q Consensus 160 ~~Ag~~ 165 (424)
||++..
T Consensus 73 n~~gp~ 78 (386)
T PF03435_consen 73 NCAGPF 78 (386)
T ss_dssp E-SSGG
T ss_pred ECCccc
Confidence 999864
No 311
>PRK05086 malate dehydrogenase; Provisional
Probab=98.44 E-value=5.2e-06 Score=79.08 Aligned_cols=172 Identities=17% Similarity=0.068 Sum_probs=100.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHh---CCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKK---RGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+|+|+||+|.||.+++..|+. .++.+++++|+... .. ...+.........+.+ .+.+++.+.+++. |
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g----~alDl~~~~~~~~i~~--~~~~d~~~~l~~~--D 71 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PG----VAVDLSHIPTAVKIKG--FSGEDPTPALEGA--D 71 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cc----eehhhhcCCCCceEEE--eCCCCHHHHcCCC--C
Confidence 6899999999999999998855 24688888986431 10 0001111111122232 2233445666766 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc----cCCCCCCCCCCCCCCCCCCChHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV----YGVNKKVPFSEKDRTDQPASLYA 232 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v----yg~~~~~~~~e~~~~~~~~~~Y~ 232 (424)
+||.++|..... ..+....+..|.....++++++++++.. ++|.+.|--+ |-.... -...... ++....|
T Consensus 72 iVIitaG~~~~~--~~~R~dll~~N~~i~~~ii~~i~~~~~~-~ivivvsNP~D~~t~~~~~~-~~~~sg~--p~~rvig 145 (312)
T PRK05086 72 VVLISAGVARKP--GMDRSDLFNVNAGIVKNLVEKVAKTCPK-ACIGIITNPVNTTVAIAAEV-LKKAGVY--DKNKLFG 145 (312)
T ss_pred EEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEccCchHHHHHHHHHH-HHHhcCC--CHHHEEe
Confidence 999999985422 2345788999999999999999999876 6666665111 000000 0000000 0111111
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 233 ATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 233 ~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
..-+..-++...+++..+++..-|+ +.|+|..+.
T Consensus 146 ~~~Lds~R~~~~ia~~l~~~~~~v~-~~v~GeHg~ 179 (312)
T PRK05086 146 VTTLDVIRSETFVAELKGKQPGEVE-VPVIGGHSG 179 (312)
T ss_pred eecHHHHHHHHHHHHHhCCChhheE-EEEEEecCC
Confidence 1113334455556666788888887 788997644
No 312
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.40 E-value=1.7e-06 Score=76.80 Aligned_cols=83 Identities=20% Similarity=0.217 Sum_probs=63.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+++++++|+||+|++|+.+++.|++.|++|++++|+.++......... ...+.....+|..+.+.+.+++++.
T Consensus 25 ~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~-- 98 (194)
T cd01078 25 DLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLR----ARFGEGVGAVETSDDAARAAAIKGA-- 98 (194)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH----hhcCCcEEEeeCCCHHHHHHHHhcC--
Confidence 3567899999999999999999999999999999997543332222111 1124556678999999999999877
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||++...
T Consensus 99 diVi~at~~ 107 (194)
T cd01078 99 DVVFAAGAA 107 (194)
T ss_pred CEEEECCCC
Confidence 999997654
No 313
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.28 E-value=3.5e-06 Score=77.55 Aligned_cols=94 Identities=14% Similarity=0.097 Sum_probs=71.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|+|+||||. |+.|++.|.++|++|++..++..... .....+...+..+..|.+++.+++++.++|+||
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~---------~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VI 70 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKH---------LYPIHQALTVHTGALDPQELREFLKRHSIDILV 70 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccc---------cccccCCceEEECCCCHHHHHHHHHhcCCCEEE
Confidence 68999999999 99999999999999999988553211 111222344557778888999999998899999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCC
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~ 198 (424)
+.+.... ..-+.|+.++|++.+..
T Consensus 71 DAtHPfA---------------~~is~~a~~a~~~~~ip 94 (256)
T TIGR00715 71 DATHPFA---------------AQITTNATAVCKELGIP 94 (256)
T ss_pred EcCCHHH---------------HHHHHHHHHHHHHhCCc
Confidence 9875421 12467889999999874
No 314
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.27 E-value=2e-05 Score=75.41 Aligned_cols=160 Identities=14% Similarity=0.094 Sum_probs=103.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-------eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---------
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD-------GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS--------- 144 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~--------- 144 (424)
+|.|+|++|.||..++..|+.+|. +++++|++.+. ...+....|+.|..
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~---------------~~a~g~~~Dl~d~~~~~~~~~~~ 65 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM---------------KVLEGVVMELMDCAFPLLDGVVP 65 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc---------------cccceeEeehhcccchhcCceec
Confidence 489999999999999999998653 59999985431 01223334444443
Q ss_pred --HHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCc-----ccCCCCCC
Q 042406 145 --LLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSS-----VYGVNKKV 216 (424)
Q Consensus 145 --~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~-----vyg~~~~~ 216 (424)
...+.++++ |+||++||.... ...+..+.+..|+.-.+.+.+...++. ....+|.+|... +.....+
T Consensus 66 ~~~~~~~~~~a--DiVVitAG~~~~--~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~~~sg- 140 (324)
T TIGR01758 66 THDPAVAFTDV--DVAILVGAFPRK--EGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPANTNALVLSNYAP- 140 (324)
T ss_pred cCChHHHhCCC--CEEEEcCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHHHHcC-
Confidence 335677766 999999997432 123457899999999999999999984 655677766411 1100000
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 217 PFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 217 ~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
. + ++...=..+.+..-++-..+++..++....|+-+.|+|..+.
T Consensus 141 -----~-~-~~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~ 184 (324)
T TIGR01758 141 -----S-I-PPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGNHSS 184 (324)
T ss_pred -----C-C-CcceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEECCCC
Confidence 0 0 111111123344445555667777998888988889997665
No 315
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=98.26 E-value=1.6e-05 Score=66.60 Aligned_cols=115 Identities=18% Similarity=0.190 Sum_probs=78.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhcc-CCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLER-AGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+|.|+|++|.+|.+++..|+..+ .+++++|++.+...........-.... ....... .+++ .+++. |
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~----~~~~a--D 71 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYE----ALKDA--D 71 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGG----GGTTE--S
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---cccc----ccccc--c
Confidence 689999999999999999999997 489999997654333222222211111 1223332 3333 35555 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
+||-+||.... ...+..+.+..|..-...+.+...+.+....++.+|
T Consensus 72 ivvitag~~~~--~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 72 IVVITAGVPRK--PGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp EEEETTSTSSS--TTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred EEEEecccccc--ccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 99999997432 224467889999999999999999988765666665
No 316
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.26 E-value=9.8e-06 Score=77.46 Aligned_cols=162 Identities=14% Similarity=0.145 Sum_probs=103.7
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-------eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCH----------
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD-------GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDK---------- 143 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---------- 143 (424)
+|.|+||+|.||..++..|+..|. +++++|++... ...+....|+.|.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~---------------~~~~g~~~Dl~d~~~~~~~~~~i 66 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM---------------KALEGVVMELQDCAFPLLKGVVI 66 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc---------------CccceeeeehhhhcccccCCcEE
Confidence 689999999999999999998762 59999985410 1122223333333
Q ss_pred -HHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCc---ccCCCCCCCC
Q 042406 144 -SLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSS---VYGVNKKVPF 218 (424)
Q Consensus 144 -~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~---vyg~~~~~~~ 218 (424)
....+.++++ |+|||+||.... ...+..+.+..|..-.+.+.+..++.. ....+|.+|-.. .|-. .
T Consensus 67 ~~~~~~~~~~a--DiVVitAG~~~~--~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~-----~ 137 (323)
T cd00704 67 TTDPEEAFKDV--DVAILVGAFPRK--PGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPANTNALIA-----L 137 (323)
T ss_pred ecChHHHhCCC--CEEEEeCCCCCC--cCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcHHHHHHHH-----H
Confidence 3456778877 999999997432 234567899999999999999999884 665666666311 0100 0
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
.... ..++...-+.+.+..-++-..+++..++....|+-..|+|..+.
T Consensus 138 k~sg-~~p~~~vig~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~ 185 (323)
T cd00704 138 KNAP-NLPPKNFTALTRLDHNRAKAQVARKLGVRVSDVKNVIIWGNHSN 185 (323)
T ss_pred HHcC-CCCHHHEEEeeHHHHHHHHHHHHHHhCcCHHHceeeeEEecccC
Confidence 0000 00111122335555555666667777887777777778897654
No 317
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=98.23 E-value=3e-06 Score=76.93 Aligned_cols=70 Identities=11% Similarity=0.143 Sum_probs=50.4
Q ss_pred EEEc-CCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----Ccc
Q 042406 83 LVTG-AAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----AFT 156 (424)
Q Consensus 83 lItG-g~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~~d 156 (424)
.||. ++|+||+++++.|+++|++|+++++... .. . . ....+|+.+.+++.++++.+ ++|
T Consensus 18 ~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~--------l~-~----~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iD 82 (227)
T TIGR02114 18 SITNHSTGHLGKIITETFLSAGHEVTLVTTKRA--------LK-P----E--PHPNLSIREIETTKDLLITLKELVQEHD 82 (227)
T ss_pred eecCCcccHHHHHHHHHHHHCCCEEEEEcChhh--------cc-c----c--cCCcceeecHHHHHHHHHHHHHHcCCCC
Confidence 4444 4889999999999999999999876210 00 0 0 01357999988887766543 579
Q ss_pred EEEEcccccCc
Q 042406 157 HVMHLAAQAGV 167 (424)
Q Consensus 157 ~vi~~Ag~~~~ 167 (424)
++|||||+...
T Consensus 83 iLVnnAgv~d~ 93 (227)
T TIGR02114 83 ILIHSMAVSDY 93 (227)
T ss_pred EEEECCEeccc
Confidence 99999998553
No 318
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=98.22 E-value=7e-06 Score=77.51 Aligned_cols=83 Identities=17% Similarity=0.179 Sum_probs=61.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEeCCCC---chhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDG-VLGLDNFNN---YYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
..++|+++|+|| |++|++++..|++.|.+ |++++|+.+ +.+....... .....+.+..+|+.+.+++.+.++
T Consensus 123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~---~~~~~~~~~~~d~~~~~~~~~~~~ 198 (289)
T PRK12548 123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIK---QEVPECIVNVYDLNDTEKLKAEIA 198 (289)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHh---hcCCCceeEEechhhhhHHHhhhc
Confidence 357899999999 89999999999999986 999999762 2222211111 112345667789998888888888
Q ss_pred ccCccEEEEcccc
Q 042406 152 VVAFTHVMHLAAQ 164 (424)
Q Consensus 152 ~~~~d~vi~~Ag~ 164 (424)
.. |+|||+-.+
T Consensus 199 ~~--DilINaTp~ 209 (289)
T PRK12548 199 SS--DILVNATLV 209 (289)
T ss_pred cC--CEEEEeCCC
Confidence 66 999998755
No 319
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=98.22 E-value=4.9e-06 Score=77.55 Aligned_cols=82 Identities=17% Similarity=0.221 Sum_probs=68.2
Q ss_pred eEEEEcCCChhHHHHHHHHHh----CCCeEEEEeCCCCchhhhHHHHHhhhhc--cCCeEEEEccCCCHHHHHHHhhccC
Q 042406 81 TVLVTGAAGFVGSHVSLALKK----RGDGVLGLDNFNNYYETSLKKARKGLLE--RAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
.++|.||+||-|.++++++.+ .|...-+..|+..++.+.+.+.....-. ...+ .+.+|.+|++++.+.+++.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak~~- 84 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAKQA- 84 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHhhh-
Confidence 489999999999999999999 6889999999988887766655443211 2334 8899999999999999988
Q ss_pred ccEEEEccccc
Q 042406 155 FTHVMHLAAQA 165 (424)
Q Consensus 155 ~d~vi~~Ag~~ 165 (424)
.+|+||+|+.
T Consensus 85 -~vivN~vGPy 94 (423)
T KOG2733|consen 85 -RVIVNCVGPY 94 (423)
T ss_pred -EEEEeccccc
Confidence 9999999974
No 320
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.99 E-value=0.00022 Score=68.16 Aligned_cols=118 Identities=18% Similarity=0.119 Sum_probs=82.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..+++|.|+|+ |.+|..++..|+.+|. ++.++|++.+.................++.... .+. +.+++.
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~---~~~----~~~~~a- 74 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA---GDY----SDCKDA- 74 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe---CCH----HHhCCC-
Confidence 45679999998 9999999999999986 799999977654443332222211112333332 232 346666
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||-+||.... ...+..+.+..|..-...+++.+++.+....++.+|-
T Consensus 75 -divIitag~~~k--~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvsN 123 (315)
T PRK00066 75 -DLVVITAGAPQK--PGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVASN 123 (315)
T ss_pred -CEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 999999997432 2245578899999999999999998887667777664
No 321
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.98 E-value=2.6e-05 Score=76.27 Aligned_cols=107 Identities=17% Similarity=0.205 Sum_probs=71.5
Q ss_pred CCCCCeEEEEcC---------------C-ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEcc
Q 042406 76 STRGLTVLVTGA---------------A-GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139 (424)
Q Consensus 76 ~~~~~~vlItGg---------------~-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D 139 (424)
.++||+|+|||| | |.+|..++++|.++|++|+++.+..... .... ...+|
T Consensus 182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------------~~~~--~~~~~ 247 (390)
T TIGR00521 182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------------TPPG--VKSIK 247 (390)
T ss_pred ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------------CCCC--cEEEE
Confidence 478999999999 3 4599999999999999999998743210 1112 24579
Q ss_pred CCCHHHH-HHHhhcc--CccEEEEcccccCchhhccCh------HHHHHHHHHHHHHHHHHHHhcC
Q 042406 140 INDKSLL-DKIFNVV--AFTHVMHLAAQAGVRYAMQNP------NSYVESNIAGFVNLLETCKSSD 196 (424)
Q Consensus 140 l~d~~~v-~~~~~~~--~~d~vi~~Ag~~~~~~~~~~~------~~~~~~N~~g~~~ll~a~~~~~ 196 (424)
+.+.+++ +++++.. +.|++||+||+.......... ...+..|+.-+..++...++..
T Consensus 248 v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~ 313 (390)
T TIGR00521 248 VSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK 313 (390)
T ss_pred eccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence 9998888 5555332 469999999997653221111 1123345555666677666543
No 322
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.94 E-value=3.3e-05 Score=73.79 Aligned_cols=74 Identities=22% Similarity=0.200 Sum_probs=52.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC-C-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKR-G-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++|+|+||||+|+||+.++++|+++ | .+++++.|+..+..... .+ +..+|+. .+.+++.+.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La----~e--------l~~~~i~---~l~~~l~~a 216 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQ----AE--------LGGGKIL---SLEEALPEA 216 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHH----HH--------hccccHH---hHHHHHccC
Confidence 578999999999999999999999865 5 58999988643322211 11 1113333 355777766
Q ss_pred CccEEEEcccccC
Q 042406 154 AFTHVMHLAAQAG 166 (424)
Q Consensus 154 ~~d~vi~~Ag~~~ 166 (424)
|+|||+++...
T Consensus 217 --DiVv~~ts~~~ 227 (340)
T PRK14982 217 --DIVVWVASMPK 227 (340)
T ss_pred --CEEEECCcCCc
Confidence 99999998743
No 323
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=97.87 E-value=6e-05 Score=65.89 Aligned_cols=76 Identities=22% Similarity=0.340 Sum_probs=47.5
Q ss_pred CCCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccC
Q 042406 77 TRGLTVLVTGA----------------AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI 140 (424)
Q Consensus 77 ~~~~~vlItGg----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl 140 (424)
++||+||||+| ||-.|.+|+++++.+|++|+++....+ .....++..+. +
T Consensus 1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~------------~~~p~~~~~i~--v 66 (185)
T PF04127_consen 1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS------------LPPPPGVKVIR--V 66 (185)
T ss_dssp -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS----------------TTEEEEE---
T ss_pred CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc------------ccccccceEEE--e
Confidence 36788888876 689999999999999999999987421 00124666664 4
Q ss_pred CCHHHH----HHHhhccCccEEEEcccccCch
Q 042406 141 NDKSLL----DKIFNVVAFTHVMHLAAQAGVR 168 (424)
Q Consensus 141 ~d~~~v----~~~~~~~~~d~vi~~Ag~~~~~ 168 (424)
.+.+++ .+.+.+. |++||+|++.+..
T Consensus 67 ~sa~em~~~~~~~~~~~--Di~I~aAAVsDf~ 96 (185)
T PF04127_consen 67 ESAEEMLEAVKELLPSA--DIIIMAAAVSDFR 96 (185)
T ss_dssp SSHHHHHHHHHHHGGGG--SEEEE-SB--SEE
T ss_pred cchhhhhhhhccccCcc--eeEEEecchhhee
Confidence 454444 4444445 9999999997653
No 324
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.84 E-value=0.00033 Score=66.82 Aligned_cols=169 Identities=15% Similarity=0.122 Sum_probs=98.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCC--CchhhhHHHHHhhhhcc-CCeEEEEccC-CCHHHHHHHhhcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFN--NYYETSLKKARKGLLER-AGVFVIDADI-NDKSLLDKIFNVV 153 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~~~~~~~~~-~~v~~~~~Dl-~d~~~v~~~~~~~ 153 (424)
|+|.|+|++|.+|..++..|+..|. +|+++||.. +................ .... ... .|. +.+++.
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~---i~~~~d~----~~l~~a 73 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAE---IKISSDL----SDVAGS 73 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcE---EEECCCH----HHhCCC
Confidence 6899999999999999999999986 599999954 22222221111110011 1111 111 232 236766
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc---cCCCCCCCCCCCCCCCCCCCh
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV---YGVNKKVPFSEKDRTDQPASL 230 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v---yg~~~~~~~~e~~~~~~~~~~ 230 (424)
|+||-++|.... ...+....+..|..-...+++.+.+.+...++|.+++..- |-......+ ++...
T Consensus 74 --DiViitag~p~~--~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~npvd~~t~~~~~~~g~-------~~~~v 142 (309)
T cd05294 74 --DIVIITAGVPRK--EGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNPVDVMTYKALKESGF-------DKNRV 142 (309)
T ss_pred --CEEEEecCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHhcCC-------CHHHE
Confidence 999999987432 1223467889999999999998888776657787776211 100000000 11112
Q ss_pred HHH-HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 231 YAA-TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 231 Y~~-sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
.|. +-+...++...+++..++....|+ +.|+|..++
T Consensus 143 iG~gt~LDs~R~~~~la~~l~v~~~~v~-~~viGeHg~ 179 (309)
T cd05294 143 FGLGTHLDSLRFKVAIAKHFNVHISEVH-TRIIGEHGD 179 (309)
T ss_pred eeccchHHHHHHHHHHHHHHCcChHHeE-EEEEecCCC
Confidence 222 223334455555666677777776 666787654
No 325
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.82 E-value=0.00049 Score=65.60 Aligned_cols=166 Identities=18% Similarity=0.130 Sum_probs=103.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLL-ERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
++|.|.|+ |.+|+.++..|+..| ++|+++||+.+.............. ......... .+.+ .+++. |
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~~---~~~~----~l~~a--D 70 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIKA---GDYS----DCKDA--D 70 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEEc---CCHH----HhCCC--C
Confidence 47999996 999999999999999 6899999987654433322221111 112222222 2332 34555 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc-----ccCCCCCCCCCCCCCCCCCCChH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS-----VYGVNKKVPFSEKDRTDQPASLY 231 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~-----vyg~~~~~~~~e~~~~~~~~~~Y 231 (424)
+||+++|.... ...+..+.+..|..-...+.+.+++++....++.+|-.. ++-... ..++....
T Consensus 71 IVIitag~~~~--~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsNP~d~~~~~~~~~~---------g~p~~~v~ 139 (306)
T cd05291 71 IVVITAGAPQK--PGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASNPVDVITYVVQKLS---------GLPKNRVI 139 (306)
T ss_pred EEEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecChHHHHHHHHHHHh---------CcCHHHEe
Confidence 99999997432 234557889999999999999999988776777777411 100000 00111112
Q ss_pred HH-HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 232 AA-TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 232 ~~-sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
|. +-+..-++...+++..+++...|+. .|+|..+.
T Consensus 140 g~gt~LDs~R~~~~la~~l~v~~~~v~~-~V~G~Hg~ 175 (306)
T cd05291 140 GTGTSLDTARLRRALAEKLNVDPRSVHA-YVLGEHGD 175 (306)
T ss_pred eccchHHHHHHHHHHHHHHCCCcccceE-EEEecCCC
Confidence 22 2233344555566667888888885 79997654
No 326
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.81 E-value=0.00032 Score=66.58 Aligned_cols=167 Identities=18% Similarity=0.102 Sum_probs=104.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+|.|+|++|.+|..++..|+.+| .+++++|++ ............ ........+. ..+++.+.+++. |+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~---~~~~~i~~~~--~~~~~y~~~~da--Di 71 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHI---NTPAKVTGYL--GPEELKKALKGA--DV 71 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhC---CCcceEEEec--CCCchHHhcCCC--CE
Confidence 589999999999999999999888 489999986 211111111110 0111222110 112355667777 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc-------ccCCCCCCCCCCCCCCCCCCCh
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS-------VYGVNKKVPFSEKDRTDQPASL 230 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~-------vyg~~~~~~~~e~~~~~~~~~~ 230 (424)
||-+||.... .-.+..+.+..|..-...+.+..++++....+|.+|-.. .|-..... ..++...
T Consensus 72 vvitaG~~~k--~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~~~i~t~~~~~~s-------~~p~~rv 142 (310)
T cd01337 72 VVIPAGVPRK--PGMTRDDLFNINAGIVRDLATAVAKACPKALILIISNPVNSTVPIAAEVLKKAG-------VYDPKRL 142 (310)
T ss_pred EEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhHHHHHHHHHHHhc-------CCCHHHE
Confidence 9999997432 234567899999999999999999988776777777532 11100000 0011112
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCC
Q 042406 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPW 265 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~ 265 (424)
.|..-+..-++...+++..|+...-|+ ++|+|..
T Consensus 143 iG~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH 176 (310)
T cd01337 143 FGVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGH 176 (310)
T ss_pred EeeechHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence 222224445566666777788878888 8899987
No 327
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=97.73 E-value=0.00051 Score=66.19 Aligned_cols=114 Identities=16% Similarity=0.222 Sum_probs=75.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCch-------------------hh-hHHHHHhhhhccCCeE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYY-------------------ET-SLKKARKGLLERAGVF 134 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~-~~~~~~~~~~~~~~v~ 134 (424)
.++.++|+|.|+ |++|.++++.|++.|. +++++|++.-.. .. ...+...+....-.++
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~ 99 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIV 99 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEE
Confidence 467788999997 8899999999999997 889999864110 00 0111111223344567
Q ss_pred EEEccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 135 VIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 135 ~~~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
.+..|++ .+.+++++++. |+||.+... .+ .-..+-++|.+.+. .+|+.+..+.+|.
T Consensus 100 ~~~~~~~-~~~~~~~~~~~--DlVid~~D~---------~~--------~r~~in~~~~~~~i--p~i~~~~~g~~G~ 155 (338)
T PRK12475 100 PVVTDVT-VEELEELVKEV--DLIIDATDN---------FD--------TRLLINDLSQKYNI--PWIYGGCVGSYGV 155 (338)
T ss_pred EEeccCC-HHHHHHHhcCC--CEEEEcCCC---------HH--------HHHHHHHHHHHcCC--CEEEEEecccEEE
Confidence 7777875 45677888866 999987631 11 11234467777776 4788877666653
No 328
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.69 E-value=0.00074 Score=64.54 Aligned_cols=171 Identities=14% Similarity=0.100 Sum_probs=104.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEeCCCCc--hhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHH
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD-------GVLGLDNFNNY--YETSLKKARKGL-LERAGVFVIDADINDKSLLDKI 149 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~ 149 (424)
.+|.|+|++|.+|..++..|+..|. +++++|++... ............ ....++... ....+.
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~-------~~~~~~ 76 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT-------TDPEEA 76 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe-------cChHHH
Confidence 4799999999999999999998883 79999986422 222211111111 011122211 122455
Q ss_pred hhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCC---cccCCCCCCCCCCCCCCC
Q 042406 150 FNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSS---SVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 150 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~---~vyg~~~~~~~~e~~~~~ 225 (424)
+++. |+||.+||.... .-.+..+.+..|..-...+.+.+.++.. ...++.+|-. ..|-.. +..+-.
T Consensus 77 ~~da--DvVVitAG~~~k--~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~------k~s~g~ 146 (323)
T TIGR01759 77 FKDV--DAALLVGAFPRK--PGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPANTNALIAS------KNAPDI 146 (323)
T ss_pred hCCC--CEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcHHHHHHHHH------HHcCCC
Confidence 6666 999999997432 2345678999999999999999999876 5466666631 000000 000000
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
++....|.+.+..-++-..+++..++....|+-..|+|..+.
T Consensus 147 p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~GeHG~ 188 (323)
T TIGR01759 147 PPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGNHSN 188 (323)
T ss_pred CHHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEecCCC
Confidence 111223334455555566667777888888888889997664
No 329
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=97.69 E-value=0.00066 Score=65.43 Aligned_cols=114 Identities=18% Similarity=0.212 Sum_probs=75.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCch-------------------hhhH-HHHHhhhhccCCeE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYY-------------------ETSL-KKARKGLLERAGVF 134 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------------------~~~~-~~~~~~~~~~~~v~ 134 (424)
.+..++|+|.|+ |++|..++..|++.|. +++++|.+.-.. .... ...-.+....-.++
T Consensus 21 ~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~ 99 (339)
T PRK07688 21 KLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVE 99 (339)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEE
Confidence 456778999998 9999999999999997 899999864110 0000 11111222334566
Q ss_pred EEEccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 135 VIDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 135 ~~~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
.+..+++ .+.+.+++++. |+||.+... ...-..+-++|.+.+. .+|+.|+.+.||.
T Consensus 100 ~~~~~~~-~~~~~~~~~~~--DlVid~~Dn-----------------~~~r~~ln~~~~~~~i--P~i~~~~~g~~G~ 155 (339)
T PRK07688 100 AIVQDVT-AEELEELVTGV--DLIIDATDN-----------------FETRFIVNDAAQKYGI--PWIYGACVGSYGL 155 (339)
T ss_pred EEeccCC-HHHHHHHHcCC--CEEEEcCCC-----------------HHHHHHHHHHHHHhCC--CEEEEeeeeeeeE
Confidence 7777775 45567778866 999987531 1122346677888775 5888888777663
No 330
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.67 E-value=0.0032 Score=59.85 Aligned_cols=166 Identities=13% Similarity=0.121 Sum_probs=103.8
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhh-hc-cCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGL-LE-RAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~-~~-~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+|.|.|+ |.||..++..|+.+|. +++++|.+.+............. .. ...+..... | .+.+++. |
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~~---~----y~~~~~a--D 70 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRAG---D----YDDCADA--D 70 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEEC---C----HHHhCCC--C
Confidence 4789998 9999999999999884 79999997665444333222211 11 123444433 3 3456666 9
Q ss_pred EEEEcccccCchhhccC-hHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCC-----cccCCCCCCCCCCCCCCCCCCCh
Q 042406 157 HVMHLAAQAGVRYAMQN-PNSYVESNIAGFVNLLETCKSSDPQPAIVWASSS-----SVYGVNKKVPFSEKDRTDQPASL 230 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~-~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~-----~vyg~~~~~~~~e~~~~~~~~~~ 230 (424)
+||-+||....+ .+.. ..+.+..|..-.+.+.+...+++....++.+|-. .+.....+ + ++.-.
T Consensus 71 ivvitaG~~~kp-g~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvsNPvDv~t~~~~k~sg--~-------p~~rv 140 (307)
T cd05290 71 IIVITAGPSIDP-GNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILITNPLDIAVYIAATEFD--Y-------PANKV 140 (307)
T ss_pred EEEECCCCCCCC-CCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCcHHHHHHHHHHHhC--c-------Chhhe
Confidence 999999974321 1221 4788999999999999999999876566666641 01000000 0 11112
Q ss_pred HHH-HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 231 YAA-TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 231 Y~~-sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
.|. +-+..-++-..+++..++....|+.. |+|..+.
T Consensus 141 iG~gt~LDs~R~~~~la~~l~v~~~~V~~~-ViGeHGd 177 (307)
T cd05290 141 IGTGTMLDTARLRRIVADKYGVDPKNVTGY-VLGEHGS 177 (307)
T ss_pred ecccchHHHHHHHHHHHHHhCCCcccEEEE-EEecCCC
Confidence 222 33444555566667778888888865 8887654
No 331
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=97.67 E-value=0.00084 Score=66.48 Aligned_cols=170 Identities=14% Similarity=0.108 Sum_probs=109.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-------CC--eEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHH
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKR-------GD--GVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDK 148 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~ 148 (424)
--+|.|+|++|.||.+++-.|+.. |. +++++|++.+............. ....++.+.. .+ .+
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~---~~----ye 172 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI---DP----YE 172 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec---CC----HH
Confidence 458999999999999999999988 64 78999998876655443333322 1112232222 23 34
Q ss_pred HhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHh-cCCCCeEEEecCCc-----ccCCCCCCCCCCCC
Q 042406 149 IFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS-SDPQPAIVWASSSS-----VYGVNKKVPFSEKD 222 (424)
Q Consensus 149 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~-~~~~~~~v~~SS~~-----vyg~~~~~~~~e~~ 222 (424)
.+++. |+||-.||.... .-.+..+.++.|..-...+.+...+ ++....||.+|-.. ++-...+ +
T Consensus 173 ~~kda--DiVVitAG~prk--pG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv~t~v~~k~sg--~---- 242 (444)
T PLN00112 173 VFQDA--EWALLIGAKPRG--PGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNTNALICLKNAP--N---- 242 (444)
T ss_pred HhCcC--CEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHHHHHHHHHHcC--C----
Confidence 56666 999999997432 2345678999999999999999998 57665777777411 1110000 0
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
+ .....=..+.+..-++-..+++..++....|+-++|+|..+.
T Consensus 243 -~-~~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~GeHGd 285 (444)
T PLN00112 243 -I-PAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST 285 (444)
T ss_pred -C-CcceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEecCCC
Confidence 0 111111233444455556667777998888888889997665
No 332
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.65 E-value=0.0002 Score=75.98 Aligned_cols=171 Identities=17% Similarity=0.109 Sum_probs=110.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeE-EEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGV-LGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
...|.++|+||-|+.|..|+..|..||++- ++..|+--+..=.....+.-......|.+-..|++..+...+++++.
T Consensus 1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~k 1845 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNK 1845 (2376)
T ss_pred CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhh
Confidence 356889999999999999999999999864 44555432211111111211112334555567777777777777655
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcc-cCCCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSV-YGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~v-yg~~~~~~~~e~~~~~ 225 (424)
.+--|||+|++..... ...+.+..-+.-+.||.||=...++.- .-.-||.+||.+- -|.
T Consensus 1846 l~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN------------- 1912 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGN------------- 1912 (2376)
T ss_pred cccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCC-------------
Confidence 4678999998743221 223334555566778888877666542 2237888888543 221
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTV 261 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v 261 (424)
..++.||-+..+.|++++.-.. .|++-+.|-=|.|
T Consensus 1913 ~GQtNYG~aNS~MERiceqRr~-~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1913 AGQTNYGLANSAMERICEQRRH-EGFPGTAIQWGAI 1947 (2376)
T ss_pred CcccccchhhHHHHHHHHHhhh-cCCCcceeeeecc
Confidence 4568899999999998887544 4777666665544
No 333
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=97.61 E-value=0.0027 Score=52.94 Aligned_cols=191 Identities=15% Similarity=0.085 Sum_probs=106.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-------HHHHHHHhh
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-------KSLLDKIFN 151 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-------~~~v~~~~~ 151 (424)
..+|+|-||-|-+|+.+++.+.++++-|.-+|..++... ..-..+..|-+= .+.+.+.+.
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-------------d~sI~V~~~~swtEQe~~v~~~vg~sL~ 69 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-------------DSSILVDGNKSWTEQEQSVLEQVGSSLQ 69 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-------------cceEEecCCcchhHHHHHHHHHHHHhhc
Confidence 357999999999999999999999999988886443110 011223233221 123444555
Q ss_pred ccCccEEEEcccccCc-hh----hccChHHHHHHHHHHHHHHHHHHHh-cCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 152 VVAFTHVMHLAAQAGV-RY----AMQNPNSYVESNIAGFVNLLETCKS-SDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 152 ~~~~d~vi~~Ag~~~~-~~----~~~~~~~~~~~N~~g~~~ll~a~~~-~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
+.++|.||+.||-... +. ...+.+.++...+....--...+.. ...+.-+-.+......+. .
T Consensus 70 gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~g------------T 137 (236)
T KOG4022|consen 70 GEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGG------------T 137 (236)
T ss_pred ccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCC------------C
Confidence 5689999999985322 11 1222344444444432222222222 222212333333333332 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh-CCc----EEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY-GLS----ITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~-~i~----~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
+..-.|+..|.+..++..+++.+. |++ ...|-|-.+-.|-.+. .++ + -..-+|
T Consensus 138 PgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRK---------------wMP------~-ADfssW 195 (236)
T KOG4022|consen 138 PGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRK---------------WMP------N-ADFSSW 195 (236)
T ss_pred CcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccc---------------cCC------C-CcccCc
Confidence 445779999999999999997553 443 3445555454443221 111 1 123357
Q ss_pred ccHHHHHHHHHHHhhh
Q 042406 301 TYIDDIVKGCLAGLDT 316 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~ 316 (424)
....-+++.++.-...
T Consensus 196 TPL~fi~e~flkWtt~ 211 (236)
T KOG4022|consen 196 TPLSFISEHFLKWTTE 211 (236)
T ss_pred ccHHHHHHHHHHHhcc
Confidence 7778888877755443
No 334
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.59 E-value=0.00033 Score=58.19 Aligned_cols=77 Identities=19% Similarity=0.214 Sum_probs=54.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDG-VLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
+.++++++|.|+ |+.|+.++..|++.|.+ |+++.|+.++........ ....+.++ ++. ++.+.+.+.
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~-----~~~~~~~~--~~~---~~~~~~~~~- 76 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEF-----GGVNIEAI--PLE---DLEEALQEA- 76 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHH-----TGCSEEEE--EGG---GHCHHHHTE-
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHc-----Ccccccee--eHH---HHHHHHhhC-
Confidence 578999999998 99999999999999986 999999655433322222 23344444 333 344666666
Q ss_pred ccEEEEccccc
Q 042406 155 FTHVMHLAAQA 165 (424)
Q Consensus 155 ~d~vi~~Ag~~ 165 (424)
|+||++.+..
T Consensus 77 -DivI~aT~~~ 86 (135)
T PF01488_consen 77 -DIVINATPSG 86 (135)
T ss_dssp -SEEEE-SSTT
T ss_pred -CeEEEecCCC
Confidence 9999998764
No 335
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=97.52 E-value=0.0013 Score=59.69 Aligned_cols=74 Identities=23% Similarity=0.378 Sum_probs=58.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCccEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFTHV 158 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d~v 158 (424)
|+++|.|+ |-+|+.+++.|.++|+.|++++++.+...... .....+..+.+|-+|++.++++ +++. |++
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~-------~~~~~~~~v~gd~t~~~~L~~agi~~a--D~v 70 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFL-------ADELDTHVVIGDATDEDVLEEAGIDDA--DAV 70 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHh-------hhhcceEEEEecCCCHHHHHhcCCCcC--CEE
Confidence 67899997 99999999999999999999999654322211 1125788999999999999988 6655 999
Q ss_pred EEccc
Q 042406 159 MHLAA 163 (424)
Q Consensus 159 i~~Ag 163 (424)
+-..+
T Consensus 71 va~t~ 75 (225)
T COG0569 71 VAATG 75 (225)
T ss_pred EEeeC
Confidence 86654
No 336
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.48 E-value=0.00064 Score=68.61 Aligned_cols=77 Identities=23% Similarity=0.251 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+++|+|+|+|+++ +|..+++.|+++|++|++.++..... ... ....+...++.++.+|..+ +... ++|
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~---~~~-~~~~l~~~~~~~~~~~~~~-----~~~~--~~d 70 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQ---LKE-ALEELGELGIELVLGEYPE-----EFLE--GVD 70 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHH---HHH-HHHHHHhcCCEEEeCCcch-----hHhh--cCC
Confidence 5689999999866 99999999999999999999864211 111 1111223467788888876 2233 459
Q ss_pred EEEEccccc
Q 042406 157 HVMHLAAQA 165 (424)
Q Consensus 157 ~vi~~Ag~~ 165 (424)
+||+++|..
T Consensus 71 ~vv~~~g~~ 79 (450)
T PRK14106 71 LVVVSPGVP 79 (450)
T ss_pred EEEECCCCC
Confidence 999999863
No 337
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=97.47 E-value=0.0004 Score=64.60 Aligned_cols=78 Identities=13% Similarity=0.121 Sum_probs=58.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
...++|-||+||.|..++++|+.+|..-.+..|+..+........ +.++-.-++.+++.+++.+++. ++|
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L--------G~~~~~~p~~~p~~~~~~~~~~--~VV 75 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL--------GPEAAVFPLGVPAALEAMASRT--QVV 75 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc--------CccccccCCCCHHHHHHHHhcc--eEE
Confidence 346899999999999999999999998888888654433222111 2222333455599999999988 999
Q ss_pred EEcccccC
Q 042406 159 MHLAAQAG 166 (424)
Q Consensus 159 i~~Ag~~~ 166 (424)
+||+|+..
T Consensus 76 lncvGPyt 83 (382)
T COG3268 76 LNCVGPYT 83 (382)
T ss_pred Eecccccc
Confidence 99999853
No 338
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=97.46 E-value=0.002 Score=60.63 Aligned_cols=168 Identities=17% Similarity=0.118 Sum_probs=100.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++|.|+|+ |+||+.++-.|+.++ .+++++|+..+..+...............-..+.+| .+ .+.+++. |+
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~a--Di 72 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGA--DI 72 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CC----hhhhcCC--CE
Confidence 57999999 999999999998886 489999997544333222221111111111222233 22 3456666 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC---CcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS---SSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS---~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
|+-.||...- .-.+..+.+..|..-...+.+...+.+....|+.+|- ..+|-......+ + .....-+.+
T Consensus 73 VvitAG~prK--pGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~~k~sg~-----p-~~rvig~gt 144 (313)
T COG0039 73 VVITAGVPRK--PGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVTNPVDILTYIAMKFSGF-----P-KNRVIGSGT 144 (313)
T ss_pred EEEeCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEecCcHHHHHHHHHHhcCC-----C-ccceecccc
Confidence 9999987432 2245578999999999999999998887645665554 111110000000 0 111122344
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCC
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGP 264 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~ 264 (424)
.+..-++-..+++..++....++- +|.|.
T Consensus 145 ~LDsaR~~~~lae~~~v~~~~V~~-~ViGe 173 (313)
T COG0039 145 VLDSARFRTFLAEKLGVSPKDVHA-YVIGE 173 (313)
T ss_pred hHHHHHHHHHHHHHhCCChhHcee-eEecc
Confidence 555566666677777887777774 45554
No 339
>PLN02602 lactate dehydrogenase
Probab=97.46 E-value=0.0048 Score=59.62 Aligned_cols=169 Identities=12% Similarity=0.137 Sum_probs=100.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++|.|+|+ |.||..++..|+..|. +++++|.+.+....................+.. + .|. +.+++. |+
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-~-~dy----~~~~da--Di 108 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-S-TDY----AVTAGS--DL 108 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-C-CCH----HHhCCC--CE
Confidence 69999996 9999999999998874 799999977654433322222111111222221 1 232 236666 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc---ccCCCCCCCCCCCCCCCCCCChHHH-
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS---VYGVNKKVPFSEKDRTDQPASLYAA- 233 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~---vyg~~~~~~~~e~~~~~~~~~~Y~~- 233 (424)
||-+||.... ...+..+.+..|..-...+.+..++++....+|.+|-.. .|-......+ ++....|.
T Consensus 109 VVitAG~~~k--~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvtNPvdv~t~~~~k~sg~-------p~~rviG~g 179 (350)
T PLN02602 109 CIVTAGARQI--PGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVSNPVDVLTYVAWKLSGF-------PANRVIGSG 179 (350)
T ss_pred EEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCchHHHHHHHHHHhCC-------CHHHEEeec
Confidence 9999997432 123456889999999999999999888776777777411 0000000000 01111111
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
+-+..-++...+++..++...-|+.. |+|..+.
T Consensus 180 t~LDs~R~r~~lA~~l~v~~~~V~~~-ViGeHGd 212 (350)
T PLN02602 180 TNLDSSRFRFLIADHLDVNAQDVQAY-IVGEHGD 212 (350)
T ss_pred chHHHHHHHHHHHHHhCCCccceeee-EEecCCC
Confidence 11222244445566668888888865 6787553
No 340
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.46 E-value=0.0032 Score=60.09 Aligned_cols=168 Identities=18% Similarity=0.170 Sum_probs=98.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+|.|.|+ |.+|..++..|+.+| .+|.++|++.+....................... .|. +.+++. |+
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~----~~l~~a--Di 70 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDY----ADCKGA--DV 70 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCH----HHhCCC--CE
Confidence 57999998 999999999999999 6899999977654322221211111112222222 233 236666 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc---cCCCCCCCCCCCCCCCCCCChHHH-
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV---YGVNKKVPFSEKDRTDQPASLYAA- 233 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v---yg~~~~~~~~e~~~~~~~~~~Y~~- 233 (424)
||.+++.... ...+.......|..-...+++.+.+.+....++.++...- |-... ... .++....|.
T Consensus 71 Viita~~~~~--~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~tNP~d~~~~~~~~-----~sg--~p~~~viG~g 141 (308)
T cd05292 71 VVITAGANQK--PGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVTNPVDVLTYVAYK-----LSG--LPPNRVIGSG 141 (308)
T ss_pred EEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHH-----HHC--cCHHHeeccc
Confidence 9999987432 1234567888899999999998888876646666653100 00000 000 011111221
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
+-+..-++-..+++..+++...|+ +.|+|..+.
T Consensus 142 t~LDs~R~~~~la~~~~v~~~~v~-~~viGeHg~ 174 (308)
T cd05292 142 TVLDTARFRYLLGEHLGVDPRSVH-AYIIGEHGD 174 (308)
T ss_pred chhhHHHHHHHHHHHhCCCcccee-ceeeccCCC
Confidence 122223444555666688888887 558887643
No 341
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.44 E-value=0.0039 Score=61.84 Aligned_cols=169 Identities=14% Similarity=0.075 Sum_probs=100.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC---CC----eEEEEeCC--CCchhhhHHHHHhhhhc-cCCeEEEEccCCCHHHHHH
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKR---GD----GVLGLDNF--NNYYETSLKKARKGLLE-RAGVFVIDADINDKSLLDK 148 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~---g~----~V~~~~r~--~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~v~~ 148 (424)
.-+|+||||+|.||.+|+-.+++- |. .++++|.. .+.+....-........ ...+.+.. .+ .+
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i~~---~~----~e 195 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISVTT---DL----DV 195 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEEEE---CC----HH
Confidence 357999999999999999998873 42 36667762 33332222222211111 12333332 12 45
Q ss_pred HhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEecC-C-----cccCCCCCCCCCC
Q 042406 149 IFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP--QPAIVWASS-S-----SVYGVNKKVPFSE 220 (424)
Q Consensus 149 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~--~~~~v~~SS-~-----~vyg~~~~~~~~e 220 (424)
.|+++ |+||-+||.... .-.+..+.++.|..-...+.++..+... . +|+.+.| . .+.-...
T Consensus 196 a~~da--DvvIitag~prk--~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~-~VlVv~tNPvD~~t~i~~k~a------ 264 (452)
T cd05295 196 AFKDA--HVIVLLDDFLIK--EGEDLEGCIRSRVAICQLYGPLIEKNAKEDV-KVIVAGRTFLNLKTSILIKYA------ 264 (452)
T ss_pred HhCCC--CEEEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEEeCCcHHHHHHHHHHHc------
Confidence 67777 999999997432 2335678999999999999999888776 4 4444443 1 1111000
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
+..++...-|.+.+..-++...+++..+++...|+-.+|.|..+.
T Consensus 265 --pgiP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG~ 309 (452)
T cd05295 265 --PSIPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGNIGG 309 (452)
T ss_pred --CCCCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEccCC
Confidence 000112223333344445555667777999999988899997654
No 342
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.43 E-value=0.0043 Score=59.18 Aligned_cols=169 Identities=14% Similarity=0.118 Sum_probs=100.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++|.|+|+ |.||..++..|+..| .+++++|++.+....................+... .|++ .+++. |+
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~----~~~~a--di 74 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS----VTANS--KV 74 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH----HhCCC--CE
Confidence 57999996 999999999999887 47999998776443332222221100111122221 2333 35666 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc---cCCCCCCCCCCCCCCCCCCChHHH-
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV---YGVNKKVPFSEKDRTDQPASLYAA- 233 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v---yg~~~~~~~~e~~~~~~~~~~Y~~- 233 (424)
||-+||.... ...+..+.+..|..-.+.+.+.+.+.+....++.+|-..- |... ... -.++....|.
T Consensus 75 vvitaG~~~k--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~~-----k~s--g~p~~~viG~g 145 (312)
T cd05293 75 VIVTAGARQN--EGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVSNPVDIMTYVAW-----KLS--GLPKHRVIGSG 145 (312)
T ss_pred EEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEccChHHHHHHHHH-----HHh--CCCHHHEEecC
Confidence 9999997432 2345578899999999999999999887767777774110 0000 000 0011112222
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
+-+...++-..+++..++....++. .|+|..+.
T Consensus 146 t~Ld~~R~~~~la~~l~v~~~~v~~-~v~GeHG~ 178 (312)
T cd05293 146 CNLDSARFRYLIAERLGVAPSSVHG-WIIGEHGD 178 (312)
T ss_pred chHHHHHHHHHHHHHhCCChhhEEE-EEeecCCC
Confidence 2223344555556666887777775 45787643
No 343
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=97.40 E-value=0.0025 Score=56.86 Aligned_cols=114 Identities=18% Similarity=0.181 Sum_probs=72.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhh--------------hH----HHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYET--------------SL----KKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--------------~~----~~~~~~~~~~~~v~~~ 136 (424)
.+..++|+|.|. |++|.++++.|+..|. +++++|.+.-.... .+ ...-.+....-.++.+
T Consensus 18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 96 (202)
T TIGR02356 18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTAL 96 (202)
T ss_pred HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 456778999996 9999999999999996 89999886321100 00 0011112223345555
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
..++. .+.+.+.+++. |+||.+... . ..-..+-+.|++.+. .+|+.++.+.+|.
T Consensus 97 ~~~i~-~~~~~~~~~~~--D~Vi~~~d~---------~--------~~r~~l~~~~~~~~i--p~i~~~~~g~~G~ 150 (202)
T TIGR02356 97 KERVT-AENLELLINNV--DLVLDCTDN---------F--------ATRYLINDACVALGT--PLISAAVVGFGGQ 150 (202)
T ss_pred hhcCC-HHHHHHHHhCC--CEEEECCCC---------H--------HHHHHHHHHHHHcCC--CEEEEEeccCeEE
Confidence 55554 35677788866 999987632 1 112335567788775 5888887666653
No 344
>COG4982 3-oxoacyl-[acyl-carrier protein]
Probab=97.38 E-value=0.013 Score=59.07 Aligned_cols=157 Identities=18% Similarity=0.180 Sum_probs=98.3
Q ss_pred CCCeEEEEcCC-ChhHHHHHHHHHhCCCeEEEEeCCCCchhh--hHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 78 RGLTVLVTGAA-GFVGSHVSLALKKRGDGVLGLDNFNNYYET--SLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 78 ~~~~vlItGg~-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+.++||||+ |.||..++..|+.-|+.|++..-+-+.... .+............+.++..+..++.+++.+++-+
T Consensus 395 ~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg 474 (866)
T COG4982 395 GDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIG 474 (866)
T ss_pred ccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhc
Confidence 56889999986 789999999999999999988643321111 11111222223456778888888887777776432
Q ss_pred ------------------CccEEEEcccccCch-hhccCh--HHHHHHHHHHHHHHHHHHHhcC----CCC--eEEEecC
Q 042406 154 ------------------AFTHVMHLAAQAGVR-YAMQNP--NSYVESNIAGFVNLLETCKSSD----PQP--AIVWASS 206 (424)
Q Consensus 154 ------------------~~d~vi~~Ag~~~~~-~~~~~~--~~~~~~N~~g~~~ll~a~~~~~----~~~--~~v~~SS 206 (424)
.||.+|-.|++.-.. ...-++ +..+++=+.....++-..+..+ +.. ++|.-.|
T Consensus 475 ~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgS 554 (866)
T COG4982 475 DEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGS 554 (866)
T ss_pred cccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCC
Confidence 378899998874321 111222 3455555555555555444432 221 5665555
Q ss_pred Cc--ccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh
Q 042406 207 SS--VYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY 249 (424)
Q Consensus 207 ~~--vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~ 249 (424)
.. -|| .-..|+-+|++.+.++..|..+.
T Consensus 555 PNrG~FG---------------gDGaYgEsK~aldav~~RW~sEs 584 (866)
T COG4982 555 PNRGMFG---------------GDGAYGESKLALDAVVNRWHSES 584 (866)
T ss_pred CCCCccC---------------CCcchhhHHHHHHHHHHHhhccc
Confidence 21 122 23679999999999999887553
No 345
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.36 E-value=0.0016 Score=61.98 Aligned_cols=115 Identities=18% Similarity=0.100 Sum_probs=77.4
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|.|+|++|.||..++..|+.+|. +++++|++. ....... .. . ......+.... +.+++.+.+++. |+|
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~g~a~D-L~-~--~~~~~~i~~~~--~~~~~~~~~~da--Div 71 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AAGVAAD-LS-H--IPTAASVKGFS--GEEGLENALKGA--DVV 71 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-CcEEEch-hh-c--CCcCceEEEec--CCCchHHHcCCC--CEE
Confidence 489999999999999999999874 799999865 1111111 10 0 00112222101 112245677777 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|-+||.... ...+..+.+..|..-...+.+...+++....+|.+|-
T Consensus 72 vitaG~~~~--~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvsN 117 (312)
T TIGR01772 72 VIPAGVPRK--PGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVITN 117 (312)
T ss_pred EEeCCCCCC--CCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 999997432 2345678899999999999999998887767777775
No 346
>PTZ00117 malate dehydrogenase; Provisional
Probab=97.35 E-value=0.0037 Score=59.90 Aligned_cols=118 Identities=15% Similarity=0.129 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCe-EEEEccCCCHHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGV-FVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
..++|.|+|| |.+|..++..|+..| .+|+++|++.+............ ....+. ..+.+ ..|. + .+++.
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~-~~~~~~~~~i~~-~~d~---~-~l~~A-- 74 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHF-STLVGSNINILG-TNNY---E-DIKDS-- 74 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhh-ccccCCCeEEEe-CCCH---H-HhCCC--
Confidence 5678999997 999999999999999 68999999776543221111110 010111 11221 1233 3 55666
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||.++|.... ...+..+.+..|..-...+++.+.+......+|++|-
T Consensus 75 DiVVitag~~~~--~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 75 DVVVITAGVQRK--EEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred CEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999999987432 2234567888899888899999988876656777765
No 347
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=97.35 E-value=0.0034 Score=52.03 Aligned_cols=110 Identities=23% Similarity=0.264 Sum_probs=71.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchh------------------hhHHHHHhhhhccCCeEEEEcc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYE------------------TSLKKARKGLLERAGVFVIDAD 139 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~------------------~~~~~~~~~~~~~~~v~~~~~D 139 (424)
.++|+|.|+ |.+|..+++.|+..|. +++++|...-... +.....-.+.....++..+..+
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~ 80 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK 80 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence 468999997 9999999999999997 7888887542110 0111111122234567777777
Q ss_pred CCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 140 INDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 140 l~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
+ +.+...+.+++. |+||.+... ...-..+.+.|++.+. .+|+.++.+.+|
T Consensus 81 ~-~~~~~~~~~~~~--d~vi~~~d~-----------------~~~~~~l~~~~~~~~~--p~i~~~~~g~~G 130 (135)
T PF00899_consen 81 I-DEENIEELLKDY--DIVIDCVDS-----------------LAARLLLNEICREYGI--PFIDAGVNGFYG 130 (135)
T ss_dssp C-SHHHHHHHHHTS--SEEEEESSS-----------------HHHHHHHHHHHHHTT---EEEEEEEETTEE
T ss_pred c-ccccccccccCC--CEEEEecCC-----------------HHHHHHHHHHHHHcCC--CEEEEEeecCEE
Confidence 7 556678888766 999987532 1122346677888875 588877765554
No 348
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=97.34 E-value=0.0033 Score=61.31 Aligned_cols=170 Identities=14% Similarity=0.094 Sum_probs=103.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-e----EEE----EeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHH
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-G----VLG----LDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDK 148 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-~----V~~----~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~ 148 (424)
.-+|.|+|++|.+|..++-.|+..|. . |.+ +|++.+............. ....++.+.. .+ .+
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~---~~----y~ 116 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI---DP----YE 116 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec---CC----HH
Confidence 35799999999999999999998873 2 333 3666655444333222221 1111232222 23 34
Q ss_pred HhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCc-----ccCCCCCCCCCCCC
Q 042406 149 IFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSS-----VYGVNKKVPFSEKD 222 (424)
Q Consensus 149 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~-----vyg~~~~~~~~e~~ 222 (424)
.+++. |+||-+||.... ...+..+.+..|..-.+.+.+...++. ...++|.+|-.. +.....+ +
T Consensus 117 ~~kda--DIVVitAG~prk--pg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPvDv~t~v~~k~sg--~---- 186 (387)
T TIGR01757 117 VFEDA--DWALLIGAKPRG--PGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGNPCNTNALIAMKNAP--N---- 186 (387)
T ss_pred HhCCC--CEEEECCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcHHHHHHHHHHHcC--C----
Confidence 56666 999999997432 234567899999999999999998854 554677666411 1110000 0
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
+ +....=..+.+..-++-..+++..++....|+-++|+|..+.
T Consensus 187 -~-~~rviG~gT~LDsaR~r~~LA~~l~v~~~~V~~~~V~GeHGd 229 (387)
T TIGR01757 187 -I-PRKNFHALTRLDENRAKCQLALKSGKFYTSVSNVTIWGNHST 229 (387)
T ss_pred -C-cccEEEecchhHHHHHHHHHHHHHCcChhHcceeEEEecCCC
Confidence 0 111111234444455666667777888888888889997664
No 349
>PRK06223 malate dehydrogenase; Reviewed
Probab=97.32 E-value=0.0066 Score=57.94 Aligned_cols=170 Identities=14% Similarity=0.102 Sum_probs=96.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLL-ERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+|+|.|.|+ |.+|..++..|+..|. +|+++|++.+.............. ....... .. .+|. +.+++. |
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i-~~-~~d~----~~~~~a--D 72 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKI-TG-TNDY----EDIAGS--D 72 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEE-Ee-CCCH----HHHCCC--C
Confidence 478999999 9999999999999875 999999976654322211111111 1111111 11 1232 235666 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc-c--cCCCCCCCCCCCCCCCCCCChHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS-V--YGVNKKVPFSEKDRTDQPASLYAA 233 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~-v--yg~~~~~~~~e~~~~~~~~~~Y~~ 233 (424)
+||.++|.... ...+..+.+.-|..-...+++.+.+......+|.+|-.. + |-......+ ++....|.
T Consensus 73 iVii~~~~p~~--~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~~~~s~~-------~~~~viG~ 143 (307)
T PRK06223 73 VVVITAGVPRK--PGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVALKESGF-------PKNRVIGM 143 (307)
T ss_pred EEEECCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHHHhCC-------CcccEEEe
Confidence 99999986431 123445677788888888988888877655677766411 0 000000000 11111121
Q ss_pred -HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 234 -TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 234 -sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
+-+..-++-..+++..++...-|+ ++|+|..+.
T Consensus 144 gt~lds~r~~~~la~~l~v~~~~v~-~~viGehg~ 177 (307)
T PRK06223 144 AGVLDSARFRTFIAEELNVSVKDVT-AFVLGGHGD 177 (307)
T ss_pred CCCcHHHHHHHHHHHHhCcChhhCc-ccEEcCCCC
Confidence 122223455556666677777776 556687543
No 350
>PRK05442 malate dehydrogenase; Provisional
Probab=97.32 E-value=0.0039 Score=59.71 Aligned_cols=171 Identities=15% Similarity=0.105 Sum_probs=103.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEeCCCCc--hhhhHHHHHhhh-hccCCeEEEEccCCCHHHHH
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-------GVLGLDNFNNY--YETSLKKARKGL-LERAGVFVIDADINDKSLLD 147 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~ 147 (424)
+.++|.|+|++|.+|..++..|+..|. +++++|++.+. ............ ....++.+. . ...
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~-~------~~y 75 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT-D------DPN 75 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe-c------ChH
Confidence 345899999999999999999998763 79999985431 211111111110 001122221 1 224
Q ss_pred HHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCc-----ccCCCCCCCCCCC
Q 042406 148 KIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSS-----VYGVNKKVPFSEK 221 (424)
Q Consensus 148 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~-----vyg~~~~~~~~e~ 221 (424)
+.+++. |+||-+||.... ...+..+.+..|..-.+.+.+...++. ....+|.+|... ++....
T Consensus 76 ~~~~da--DiVVitaG~~~k--~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPvDv~t~v~~k~s------- 144 (326)
T PRK05442 76 VAFKDA--DVALLVGARPRG--PGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPANTNALIAMKNA------- 144 (326)
T ss_pred HHhCCC--CEEEEeCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCchHHHHHHHHHHc-------
Confidence 556666 999999997432 234567899999999999999998855 454677777410 110000
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
+-.++....|.+-+..-++-..+++..+++...|+...|+|..+.
T Consensus 145 -~g~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~GeHG~ 189 (326)
T PRK05442 145 -PDLPAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGNHSA 189 (326)
T ss_pred -CCCCHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEECCcC
Confidence 000111223334444455556666777888888887778897654
No 351
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=97.29 E-value=0.002 Score=60.01 Aligned_cols=115 Identities=15% Similarity=0.083 Sum_probs=78.3
Q ss_pred EEEEcCCChhHHHHHHHHHhCC----CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 82 VLVTGAAGFVGSHVSLALKKRG----DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|.|+||+|.+|..++..|+..| .+|+++|++.+...........-........+. -.++.++.+++. |+
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~-----~~~d~~~~~~~a--Di 73 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVS-----ITDDPYEAFKDA--DV 73 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEE-----ECCchHHHhCCC--CE
Confidence 4799999999999999999999 799999998765544333322211111111111 112245667777 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
||..++..... -.........|+.-...+++.+++......++.+|
T Consensus 74 Vv~t~~~~~~~--g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 74 VIITAGVGRKP--GMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred EEECCCCCCCc--CCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 99999874322 22345678889999999999999888765777665
No 352
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.24 E-value=0.0012 Score=64.65 Aligned_cols=104 Identities=15% Similarity=0.144 Sum_probs=64.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~ 154 (424)
...|+|.|.||||++|..|++.|.++ +.+|+.+.+..+.... .. .........|+.+.+.++.. ++++
T Consensus 36 ~~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~-i~--------~~~~~l~~~~~~~~~~~~~~~~~~~- 105 (381)
T PLN02968 36 EEKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQS-FG--------SVFPHLITQDLPNLVAVKDADFSDV- 105 (381)
T ss_pred ccccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCC-ch--------hhCccccCccccceecCCHHHhcCC-
Confidence 46679999999999999999999999 5789998874321111 00 00111222344333333322 4555
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
|+||-+.+.. ....+++.+. .+ .++|-.|+..-+..
T Consensus 106 -DvVf~Alp~~------------------~s~~i~~~~~-~g--~~VIDlSs~fRl~~ 141 (381)
T PLN02968 106 -DAVFCCLPHG------------------TTQEIIKALP-KD--LKIVDLSADFRLRD 141 (381)
T ss_pred -CEEEEcCCHH------------------HHHHHHHHHh-CC--CEEEEcCchhccCC
Confidence 9999876531 3455666653 34 38999999776543
No 353
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=97.24 E-value=0.0065 Score=57.71 Aligned_cols=114 Identities=17% Similarity=0.135 Sum_probs=77.2
Q ss_pred EEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 82 VLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|.|.|+ |.+|..++..|+..| .+++++|++.+...........-...........+ .| .+.+++. |+||
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~----~~~l~~a--DiVI 71 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GD----YADAADA--DIVV 71 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CC----HHHhCCC--CEEE
Confidence 468887 889999999999998 68999999776544333322221111112222221 22 2356666 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
.+||.... ...+....+..|+.-...+.+..++++....++.+|.
T Consensus 72 itag~p~~--~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~sN 116 (300)
T cd00300 72 ITAGAPRK--PGETRLDLINRNAPILRSVITNLKKYGPDAIILVVSN 116 (300)
T ss_pred EcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 99997432 2335577888999999999999999887657776664
No 354
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=97.17 E-value=0.0029 Score=68.91 Aligned_cols=78 Identities=19% Similarity=0.156 Sum_probs=58.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-Ce-------------EEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRG-DG-------------VLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND 142 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d 142 (424)
..+|+|+|.|+ |+||+..++.|++.+ .+ |.+.|++.+..... .. ..+++..+..|++|
T Consensus 567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~l----a~---~~~~~~~v~lDv~D 638 (1042)
T PLN02819 567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKET----VE---GIENAEAVQLDVSD 638 (1042)
T ss_pred ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHH----HH---hcCCCceEEeecCC
Confidence 35789999997 999999999998763 33 77777754322111 11 12367889999999
Q ss_pred HHHHHHHhhccCccEEEEcccc
Q 042406 143 KSLLDKIFNVVAFTHVMHLAAQ 164 (424)
Q Consensus 143 ~~~v~~~~~~~~~d~vi~~Ag~ 164 (424)
.+++.++++++ |+||++...
T Consensus 639 ~e~L~~~v~~~--DaVIsalP~ 658 (1042)
T PLN02819 639 SESLLKYVSQV--DVVISLLPA 658 (1042)
T ss_pred HHHHHHhhcCC--CEEEECCCc
Confidence 99999998876 999999754
No 355
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=97.17 E-value=0.016 Score=55.58 Aligned_cols=120 Identities=13% Similarity=0.114 Sum_probs=77.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHH-HHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKK-ARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
.+.++|.|.|+ |.+|..++..++..|. +|+++|++++........ ............+.. .+|. +.+++.
T Consensus 4 ~~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~----~~l~~a- 75 (321)
T PTZ00082 4 IKRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNY----EDIAGS- 75 (321)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCH----HHhCCC-
Confidence 34578999995 9999999999999995 899999987654221111 111111111222221 1233 345666
Q ss_pred ccEEEEcccccCchhhc----cChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 155 FTHVMHLAAQAGVRYAM----QNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~----~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||.+||..... .+ -+..+.+..|..-...+++.+.+......++.+|-
T Consensus 76 -DiVI~tag~~~~~-~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 76 -DVVIVTAGLTKRP-GKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred -CEEEECCCCCCCC-CCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 9999999874321 11 03456788898888889998888876546777775
No 356
>PRK08328 hypothetical protein; Provisional
Probab=97.16 E-value=0.0078 Score=54.85 Aligned_cols=114 Identities=16% Similarity=0.153 Sum_probs=71.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhh----------h----HH-----HHHhhhhccCCeEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYET----------S----LK-----KARKGLLERAGVFV 135 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----------~----~~-----~~~~~~~~~~~v~~ 135 (424)
.+.+.+|+|.|+ |++|.++++.|+..|. +++++|.+.-.... . .+ .........-.++.
T Consensus 24 ~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~ 102 (231)
T PRK08328 24 KLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIET 102 (231)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEE
Confidence 356678999997 9999999999999996 68888865421110 0 00 00111122334555
Q ss_pred EEccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 136 ~~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
+...+ +.+.+.+++++. |+||.+... .+ .-..+-++|++.+. .+|+.++.+.+|.
T Consensus 103 ~~~~~-~~~~~~~~l~~~--D~Vid~~d~---------~~--------~r~~l~~~~~~~~i--p~i~g~~~g~~G~ 157 (231)
T PRK08328 103 FVGRL-SEENIDEVLKGV--DVIVDCLDN---------FE--------TRYLLDDYAHKKGI--PLVHGAVEGTYGQ 157 (231)
T ss_pred EeccC-CHHHHHHHHhcC--CEEEECCCC---------HH--------HHHHHHHHHHHcCC--CEEEEeeccCEEE
Confidence 55555 445567778866 999987632 11 11234467788876 5888888777774
No 357
>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).
Probab=97.16 E-value=0.0058 Score=55.64 Aligned_cols=113 Identities=15% Similarity=0.120 Sum_probs=71.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchh--------------h----hHHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYE--------------T----SLKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--------------~----~~~~~~~~~~~~~~v~~~ 136 (424)
.+..++|+|.|+ |++|.++++.|+..|. +++++|.+.-... . ...+.-.+....-+++.+
T Consensus 18 ~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~ 96 (228)
T cd00757 18 KLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAY 96 (228)
T ss_pred HHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEe
Confidence 356778999996 9999999999999996 6777765431110 0 001111112223456666
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
..++ +.+.+.+++++. |+||.+... + ..-..+-++|.+.+. .+|+.+..+.+|
T Consensus 97 ~~~i-~~~~~~~~~~~~--DvVi~~~d~---------~--------~~r~~l~~~~~~~~i--p~i~~g~~g~~g 149 (228)
T cd00757 97 NERL-DAENAEELIAGY--DLVLDCTDN---------F--------ATRYLINDACVKLGK--PLVSGAVLGFEG 149 (228)
T ss_pred ccee-CHHHHHHHHhCC--CEEEEcCCC---------H--------HHHHHHHHHHHHcCC--CEEEEEeccCEE
Confidence 6666 346677788766 999988642 1 112346677888775 578877665554
No 358
>PRK08644 thiamine biosynthesis protein ThiF; Provisional
Probab=97.11 E-value=0.01 Score=53.33 Aligned_cols=114 Identities=20% Similarity=0.190 Sum_probs=70.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchh----------------h-hHHHHHhhhhccCCeEEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYE----------------T-SLKKARKGLLERAGVFVID 137 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------------~-~~~~~~~~~~~~~~v~~~~ 137 (424)
.+...+|+|.|+ |++|..+++.|++.|. +++++|.+.-... . .....-......-+++.+.
T Consensus 25 ~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~~ 103 (212)
T PRK08644 25 KLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAHN 103 (212)
T ss_pred HHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEEe
Confidence 356678999997 9999999999999997 5888888631100 0 0000111122334566666
Q ss_pred ccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCcccCC
Q 042406 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS-DPQPAIVWASSSSVYGV 212 (424)
Q Consensus 138 ~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~vyg~ 212 (424)
..+++ +.+.+.+++. |+||.+... ...-..+.+.|.+. +. .+|+.|..+.|+.
T Consensus 104 ~~i~~-~~~~~~~~~~--DvVI~a~D~-----------------~~~r~~l~~~~~~~~~~--p~I~~~~~~~~~~ 157 (212)
T PRK08644 104 EKIDE-DNIEELFKDC--DIVVEAFDN-----------------AETKAMLVETVLEHPGK--KLVAASGMAGYGD 157 (212)
T ss_pred eecCH-HHHHHHHcCC--CEEEECCCC-----------------HHHHHHHHHHHHHhCCC--CEEEeehhhccCC
Confidence 66654 4566778766 999987421 11223455666666 54 5777766555553
No 359
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=97.10 E-value=0.01 Score=54.42 Aligned_cols=113 Identities=18% Similarity=0.153 Sum_probs=69.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhh------------------HHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETS------------------LKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~------------------~~~~~~~~~~~~~v~~~ 136 (424)
.+...+|+|.|+ |++|..+++.|+..|. +++++|.+.-..... ..+...+....-.++.+
T Consensus 21 ~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~ 99 (240)
T TIGR02355 21 ALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPI 99 (240)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEE
Confidence 356678999997 9999999999999995 788888754321100 00111112223345555
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
...+. .+.+.+++++. |+||.+... + ..-..+-++|.+.+. .+|+.++.+.+|
T Consensus 100 ~~~i~-~~~~~~~~~~~--DlVvd~~D~---------~--------~~r~~ln~~~~~~~i--p~v~~~~~g~~G 152 (240)
T TIGR02355 100 NAKLD-DAELAALIAEH--DIVVDCTDN---------V--------EVRNQLNRQCFAAKV--PLVSGAAIRMEG 152 (240)
T ss_pred eccCC-HHHHHHHhhcC--CEEEEcCCC---------H--------HHHHHHHHHHHHcCC--CEEEEEecccEe
Confidence 44443 35567777766 999987632 1 112345577888876 488777655555
No 360
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=97.10 E-value=0.002 Score=64.35 Aligned_cols=80 Identities=23% Similarity=0.243 Sum_probs=58.1
Q ss_pred CCCCCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEc
Q 042406 75 RSTRGLTVLVTGA----------------AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA 138 (424)
Q Consensus 75 ~~~~~~~vlItGg----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~ 138 (424)
+++.||+||||+| ||-.|.+|++++..+|++|+++.-..+ .....+++++.
T Consensus 252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~------------~~~p~~v~~i~- 318 (475)
T PRK13982 252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD------------LADPQGVKVIH- 318 (475)
T ss_pred cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC------------CCCCCCceEEE-
Confidence 3589999999998 678999999999999999999974221 01224566664
Q ss_pred cCCCHHHHHHHhhc-cCccEEEEcccccCch
Q 042406 139 DINDKSLLDKIFNV-VAFTHVMHLAAQAGVR 168 (424)
Q Consensus 139 Dl~d~~~v~~~~~~-~~~d~vi~~Ag~~~~~ 168 (424)
+...+++.+++.+ .+.|++|++|++.+..
T Consensus 319 -V~ta~eM~~av~~~~~~Di~I~aAAVaDyr 348 (475)
T PRK13982 319 -VESARQMLAAVEAALPADIAIFAAAVADWR 348 (475)
T ss_pred -ecCHHHHHHHHHhhCCCCEEEEecccccee
Confidence 4455555555433 3569999999997654
No 361
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.09 E-value=0.0042 Score=62.72 Aligned_cols=72 Identities=15% Similarity=0.248 Sum_probs=56.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCccEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFTHV 158 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d~v 158 (424)
|+|+|+|+ |.+|+.+++.|.++|++|++++++.+.... .. ...++.++.+|.++.+.+.++ +++. |.|
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~----~~----~~~~~~~~~gd~~~~~~l~~~~~~~a--~~v 69 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRR----LQ----DRLDVRTVVGNGSSPDVLREAGAEDA--DLL 69 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHH----HH----hhcCEEEEEeCCCCHHHHHHcCCCcC--CEE
Confidence 67999998 999999999999999999999985432111 11 124688999999999988887 6655 988
Q ss_pred EEcc
Q 042406 159 MHLA 162 (424)
Q Consensus 159 i~~A 162 (424)
|-+.
T Consensus 70 i~~~ 73 (453)
T PRK09496 70 IAVT 73 (453)
T ss_pred EEec
Confidence 8765
No 362
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.07 E-value=0.0024 Score=61.65 Aligned_cols=70 Identities=23% Similarity=0.160 Sum_probs=45.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCe---EEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDG---VLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
+++|+|.||||++|+.|++.|.++||. ++.+.+..+..... ...+......|+.+. .++++
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l---------~~~g~~i~v~d~~~~-----~~~~v-- 64 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKEL---------SFKGKELKVEDLTTF-----DFSGV-- 64 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCee---------eeCCceeEEeeCCHH-----HHcCC--
Confidence 478999999999999999999998874 47776643321111 011233444466532 23444
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||.+++.
T Consensus 65 DvVf~A~g~ 73 (334)
T PRK14874 65 DIALFSAGG 73 (334)
T ss_pred CEEEECCCh
Confidence 999988764
No 363
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.06 E-value=0.0016 Score=62.14 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=32.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchh
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE 117 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 117 (424)
|+|.|+| .|.+|..++..|+++|++|++++|+.+..+
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~ 39 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAA 39 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHH
Confidence 5799999 599999999999999999999999765443
No 364
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=97.04 E-value=0.0023 Score=54.34 Aligned_cols=76 Identities=16% Similarity=0.163 Sum_probs=49.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.++++++|+|+ |.+|..+++.|++.| ++|++++|+.+......... ... .+..+..+.+ +++++.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~-----~~~---~~~~~~~~~~---~~~~~~-- 82 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERF-----GEL---GIAIAYLDLE---ELLAEA-- 82 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH-----hhc---ccceeecchh---hccccC--
Confidence 45678999998 999999999999996 78999998654332211111 111 1222344433 335555
Q ss_pred cEEEEcccccC
Q 042406 156 THVMHLAAQAG 166 (424)
Q Consensus 156 d~vi~~Ag~~~ 166 (424)
|+||++.....
T Consensus 83 Dvvi~~~~~~~ 93 (155)
T cd01065 83 DLIINTTPVGM 93 (155)
T ss_pred CEEEeCcCCCC
Confidence 99999987643
No 365
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=97.03 E-value=0.01 Score=47.59 Aligned_cols=71 Identities=27% Similarity=0.301 Sum_probs=51.4
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEEc
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHL 161 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~~ 161 (424)
|+|.|. |-+|..+++.|.+.+.+|++++++.+. .+.....++.++.+|.+|.+.++++--+ +.+.|+-+
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~---------~~~~~~~~~~~i~gd~~~~~~l~~a~i~-~a~~vv~~ 69 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPER---------VEELREEGVEVIYGDATDPEVLERAGIE-KADAVVIL 69 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHH---------HHHHHHTTSEEEES-TTSHHHHHHTTGG-CESEEEEE
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHH---------HHHHHhcccccccccchhhhHHhhcCcc-ccCEEEEc
Confidence 578887 789999999999987799999985432 1112234588999999999998876322 45888866
Q ss_pred cc
Q 042406 162 AA 163 (424)
Q Consensus 162 Ag 163 (424)
..
T Consensus 70 ~~ 71 (116)
T PF02254_consen 70 TD 71 (116)
T ss_dssp SS
T ss_pred cC
Confidence 53
No 366
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.02 E-value=0.0071 Score=49.09 Aligned_cols=97 Identities=15% Similarity=0.099 Sum_probs=52.7
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC-CeEE-EEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRG-DGVL-GLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g-~~V~-~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
||.|+||||++|+.|++.|+++- .+++ ++.+..+. ................+.+. | .+.+. +.++ |+|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~--~-~~~~~----~~~~--Dvv 70 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSA-GKPLSEVFPHPKGFEDLSVE--D-ADPEE----LSDV--DVV 70 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTT-TSBHHHTTGGGTTTEEEBEE--E-TSGHH----HTTE--SEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecccc-CCeeehhccccccccceeEe--e-cchhH----hhcC--CEE
Confidence 58999999999999999999975 3544 44443311 11111111111111122222 2 34333 2544 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCC
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSS 207 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~ 207 (424)
|.|.+.. .+..+.+.+.+.+. ++|=.|+.
T Consensus 71 f~a~~~~------------------~~~~~~~~~~~~g~--~ViD~s~~ 99 (121)
T PF01118_consen 71 FLALPHG------------------ASKELAPKLLKAGI--KVIDLSGD 99 (121)
T ss_dssp EE-SCHH------------------HHHHHHHHHHHTTS--EEEESSST
T ss_pred EecCchh------------------HHHHHHHHHhhCCc--EEEeCCHH
Confidence 9987531 13456666666665 56666654
No 367
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=97.02 E-value=0.013 Score=52.02 Aligned_cols=115 Identities=16% Similarity=0.198 Sum_probs=72.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhh--------------------HHHHHhhhhccCCeE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETS--------------------LKKARKGLLERAGVF 134 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--------------------~~~~~~~~~~~~~v~ 134 (424)
.++..+|+|.|+ |++|.++++.|+..|. +++++|.+.-..... ....-.+....-+++
T Consensus 16 ~L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~lNp~v~i~ 94 (198)
T cd01485 16 KLRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQELNPNVKLS 94 (198)
T ss_pred HHhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHHCCCCEEE
Confidence 355678999998 5599999999999996 688888653211000 000111222334556
Q ss_pred EEEccCCC-HHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 135 VIDADIND-KSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 135 ~~~~Dl~d-~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
.+..++.+ .+...+.++.. |+||.+... ......+-+.|++.+. .+|+.++.+.||.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~--dvVi~~~d~-----------------~~~~~~ln~~c~~~~i--p~i~~~~~G~~G~ 152 (198)
T cd01485 95 IVEEDSLSNDSNIEEYLQKF--TLVIATEEN-----------------YERTAKVNDVCRKHHI--PFISCATYGLIGY 152 (198)
T ss_pred EEecccccchhhHHHHHhCC--CEEEECCCC-----------------HHHHHHHHHHHHHcCC--CEEEEEeecCEEE
Confidence 66656642 44566677765 999876321 1122345577888886 5899988888775
No 368
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=97.00 E-value=0.009 Score=56.85 Aligned_cols=116 Identities=16% Similarity=0.136 Sum_probs=74.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLL-ERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+|.|.|+ |.+|..++..|+.+|. +|+++|+..+.............. ...... +.. ..|.+ + +++. |+
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~-i~~-t~d~~---~-~~~a--Di 72 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTK-VTG-TNNYA---D-TANS--DI 72 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcE-EEe-cCCHH---H-hCCC--CE
Confidence 57999997 9999999999999886 899999965532211111111000 000111 111 12322 2 4555 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
||-++|.... ...+..+.+..|..-...+++...+.+....+|.+|.
T Consensus 73 VIitag~p~~--~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 73 VVITAGLPRK--PGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred EEEcCCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 9999986432 1234457888999999999998888776657777775
No 369
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=96.99 E-value=0.0037 Score=56.83 Aligned_cols=122 Identities=20% Similarity=0.136 Sum_probs=75.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
..++.+|.|.||+|+||+.|...|. ....|.-+.-..-...+........... .......+-.+.+++++++.
T Consensus 25 ~~~~~KVAvlGAaGGIGQPLSLLlK-~np~Vs~LaLYDi~~~~GVaaDlSHI~T----~s~V~g~~g~~~L~~al~~a-- 97 (345)
T KOG1494|consen 25 SQRGLKVAVLGAAGGIGQPLSLLLK-LNPLVSELALYDIANTPGVAADLSHINT----NSSVVGFTGADGLENALKGA-- 97 (345)
T ss_pred ccCcceEEEEecCCccCccHHHHHh-cCcccceeeeeecccCCcccccccccCC----CCceeccCChhHHHHHhcCC--
Confidence 3466789999999999999998554 5444333322110000111111111111 11122333466899999988
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+|+-=||+.. ..--..++.|++|..-...|..++.+.-+...+.++|-
T Consensus 98 dvVvIPAGVPR--KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~vIsN 146 (345)
T KOG1494|consen 98 DVVVIPAGVPR--KPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILVISN 146 (345)
T ss_pred CEEEecCCCCC--CCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEeecC
Confidence 99999999732 22234578999999999999999888766545666653
No 370
>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins. This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.
Probab=96.96 E-value=0.021 Score=47.82 Aligned_cols=108 Identities=22% Similarity=0.250 Sum_probs=67.1
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCch--------------hhhH----HHHHhhhhccCCeEEEEccCC
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYY--------------ETSL----KKARKGLLERAGVFVIDADIN 141 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~--------------~~~~----~~~~~~~~~~~~v~~~~~Dl~ 141 (424)
+|+|.|+ |++|..+++.|+..|. +++++|.+.-.. ...+ .+.-.+....-.++.+..++.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~ 79 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS 79 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence 4899997 9999999999999997 688888653111 0000 001111122334556666655
Q ss_pred CHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 142 d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
+.. ..+.+++. |+||.+... ......+.+.|++.+. .+|..++.+.+|
T Consensus 80 ~~~-~~~~~~~~--diVi~~~d~-----------------~~~~~~l~~~~~~~~i--~~i~~~~~g~~g 127 (143)
T cd01483 80 EDN-LDDFLDGV--DLVIDAIDN-----------------IAVRRALNRACKELGI--PVIDAGGLGLGG 127 (143)
T ss_pred hhh-HHHHhcCC--CEEEECCCC-----------------HHHHHHHHHHHHHcCC--CEEEEcCCCcEE
Confidence 433 35666655 999988642 1223456778888875 588877765444
No 371
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.93 E-value=0.0034 Score=53.99 Aligned_cols=57 Identities=19% Similarity=0.191 Sum_probs=47.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
++.+++|+|+|+++.+|..+++.|.++|.+|+++.|+. +.+.+.+.+.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~------------------------------~~l~~~l~~a-- 88 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT------------------------------KNLKEHTKQA-- 88 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc------------------------------hhHHHHHhhC--
Confidence 57899999999977789999999999999999998731 3456677777
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||.+.+.
T Consensus 89 DiVIsat~~ 97 (168)
T cd01080 89 DIVIVAVGK 97 (168)
T ss_pred CEEEEcCCC
Confidence 999998775
No 372
>cd01487 E1_ThiF_like E1_ThiF_like. Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.92 E-value=0.018 Score=50.05 Aligned_cols=109 Identities=19% Similarity=0.208 Sum_probs=65.9
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCC---chh----------hhH----HHHHhhhhccCCeEEEEccCCC
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNN---YYE----------TSL----KKARKGLLERAGVFVIDADIND 142 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~----------~~~----~~~~~~~~~~~~v~~~~~Dl~d 142 (424)
+|+|.|+ |++|..+++.|++.|. +++++|.+.- ... ..+ .....+.....+++.+...+..
T Consensus 1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~lnp~v~i~~~~~~~~~ 79 (174)
T cd01487 1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREINPFVKIEAINIKIDE 79 (174)
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHHCCCCEEEEEEeecCh
Confidence 4899997 9999999999999997 5999998751 110 000 1111112233456666666644
Q ss_pred HHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCcccCC
Q 042406 143 KSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS-DPQPAIVWASSSSVYGV 212 (424)
Q Consensus 143 ~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~vyg~ 212 (424)
+.+.+++++. |+||.+... ...-..+.+.+.+. +. .+|+.+..+.|+.
T Consensus 80 -~~~~~~l~~~--DlVi~~~d~-----------------~~~r~~i~~~~~~~~~i--p~i~~~~~~~~~~ 128 (174)
T cd01487 80 -NNLEGLFGDC--DIVVEAFDN-----------------AETKAMLAESLLGNKNK--PVVCASGMAGFGD 128 (174)
T ss_pred -hhHHHHhcCC--CEEEECCCC-----------------HHHHHHHHHHHHHHCCC--CEEEEehhhccCC
Confidence 5677788866 999987421 11112355555555 54 4776665555543
No 373
>PRK15116 sulfur acceptor protein CsdL; Provisional
Probab=96.91 E-value=0.048 Score=50.61 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=64.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchh----------h--------hHHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYE----------T--------SLKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~----------~--------~~~~~~~~~~~~~~v~~~ 136 (424)
.+.+.+|+|.|+ |++|.++++.|++.| -+++++|.+.-... . ...+...+.+..-++..+
T Consensus 27 kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~~i 105 (268)
T PRK15116 27 LFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVV 105 (268)
T ss_pred HhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEEEE
Confidence 456778999997 999999999999999 57888886532110 0 000111111222234444
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
.. .-+++.+.+++.. ++|+||.+.... ..-..|.+.|++.+. .+|...+
T Consensus 106 ~~-~i~~e~~~~ll~~-~~D~VIdaiD~~-----------------~~k~~L~~~c~~~~i--p~I~~gG 154 (268)
T PRK15116 106 DD-FITPDNVAEYMSA-GFSYVIDAIDSV-----------------RPKAALIAYCRRNKI--PLVTTGG 154 (268)
T ss_pred ec-ccChhhHHHHhcC-CCCEEEEcCCCH-----------------HHHHHHHHHHHHcCC--CEEEECC
Confidence 22 2245566666642 459999886431 122357788888876 3554433
No 374
>PRK05597 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.89 E-value=0.015 Score=56.57 Aligned_cols=113 Identities=19% Similarity=0.040 Sum_probs=71.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCch-----------------hh-hHHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYY-----------------ET-SLKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~-~~~~~~~~~~~~~~v~~~ 136 (424)
.+...+|+|.|+ |++|..+++.|+..|. +++++|.+.-.. .. ...+.-.+....-+++.+
T Consensus 25 ~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~~ 103 (355)
T PRK05597 25 SLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTVS 103 (355)
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEEE
Confidence 456788999998 9999999999999996 788888764111 00 011111122333456666
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
...++. +...+++++. |+||.+... ...-..+-++|.+.+. -+|+.++.+.+|
T Consensus 104 ~~~i~~-~~~~~~~~~~--DvVvd~~d~-----------------~~~r~~~n~~c~~~~i--p~v~~~~~g~~g 156 (355)
T PRK05597 104 VRRLTW-SNALDELRDA--DVILDGSDN-----------------FDTRHLASWAAARLGI--PHVWASILGFDA 156 (355)
T ss_pred EeecCH-HHHHHHHhCC--CEEEECCCC-----------------HHHHHHHHHHHHHcCC--CEEEEEEecCeE
Confidence 666654 4556677766 999988632 1112235567888776 488877655554
No 375
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=96.87 E-value=0.014 Score=57.36 Aligned_cols=112 Identities=18% Similarity=0.164 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCC-------------------CchhhhHHHHHhhhhccCCeEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFN-------------------NYYETSLKKARKGLLERAGVFV 135 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~ 135 (424)
.+..++|+|.|+ |++|..++..|+..|. +++++|++. .+.+...... .+....-.+..
T Consensus 132 ~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l-~~~np~v~v~~ 209 (376)
T PRK08762 132 RLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRL-AALNPDVQVEA 209 (376)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHH-HHHCCCCEEEE
Confidence 456788999986 9999999999999997 788998862 1111111111 11122234455
Q ss_pred EEccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 136 IDADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 136 ~~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
+...+.+ +.+.+++++. |+||++... +. .-..+-++|.+.+. .+|+.+..+.+|
T Consensus 210 ~~~~~~~-~~~~~~~~~~--D~Vv~~~d~---------~~--------~r~~ln~~~~~~~i--p~i~~~~~g~~g 263 (376)
T PRK08762 210 VQERVTS-DNVEALLQDV--DVVVDGADN---------FP--------TRYLLNDACVKLGK--PLVYGAVFRFEG 263 (376)
T ss_pred EeccCCh-HHHHHHHhCC--CEEEECCCC---------HH--------HHHHHHHHHHHcCC--CEEEEEeccCEE
Confidence 5555543 5567777766 999998632 11 11235577888876 588887655544
No 376
>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional
Probab=96.86 E-value=0.022 Score=52.42 Aligned_cols=113 Identities=18% Similarity=0.153 Sum_probs=70.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhh--------------H----HHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETS--------------L----KKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--------------~----~~~~~~~~~~~~v~~~ 136 (424)
.++.++|+|.|+ |++|..+++.|+..|. +++++|.+.-..... + ...-.+....-+++.+
T Consensus 29 ~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~~ 107 (245)
T PRK05690 29 KLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIETI 107 (245)
T ss_pred HhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence 456788999998 9999999999999995 788887654221110 0 0111122233456666
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
...++ .+.+.+++++. |+||.+... + ..-..+-++|.+.+. .+|+.++.+.+|
T Consensus 108 ~~~i~-~~~~~~~~~~~--DiVi~~~D~---------~--------~~r~~ln~~~~~~~i--p~v~~~~~g~~G 160 (245)
T PRK05690 108 NARLD-DDELAALIAGH--DLVLDCTDN---------V--------ATRNQLNRACFAAKK--PLVSGAAIRMEG 160 (245)
T ss_pred eccCC-HHHHHHHHhcC--CEEEecCCC---------H--------HHHHHHHHHHHHhCC--EEEEeeeccCCc
Confidence 66665 45567778866 999988632 1 112345567777775 477766554444
No 377
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.86 E-value=0.025 Score=50.31 Aligned_cols=82 Identities=21% Similarity=0.226 Sum_probs=55.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCC---CCchhh----------hH----HHHHhhhhccCCeEEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNF---NNYYET----------SL----KKARKGLLERAGVFVID 137 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~----------~~----~~~~~~~~~~~~v~~~~ 137 (424)
.+..++|+|.|+ |++|..++..|++.|. +|+++|++ .+.... .+ ............++.+.
T Consensus 18 ~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~inp~~~i~~~~ 96 (200)
T TIGR02354 18 KLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEINPYTEIEAYD 96 (200)
T ss_pred HHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHHCCCCEEEEee
Confidence 356778999998 8999999999999998 69999987 221110 00 00111112234566666
Q ss_pred ccCCCHHHHHHHhhccCccEEEEc
Q 042406 138 ADINDKSLLDKIFNVVAFTHVMHL 161 (424)
Q Consensus 138 ~Dl~d~~~v~~~~~~~~~d~vi~~ 161 (424)
.+++ .+.+.++++++ |+||.+
T Consensus 97 ~~i~-~~~~~~~~~~~--DlVi~a 117 (200)
T TIGR02354 97 EKIT-EENIDKFFKDA--DIVCEA 117 (200)
T ss_pred eeCC-HhHHHHHhcCC--CEEEEC
Confidence 6665 46677788866 999987
No 378
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.84 E-value=0.0072 Score=60.92 Aligned_cols=78 Identities=21% Similarity=0.131 Sum_probs=51.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+.+|+|+|||++| +|..+++.|+++|++|++.++........... +...++.+..++.. .. .++. ++|
T Consensus 3 ~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~-----l~~~g~~~~~~~~~--~~---~~~~-~~d 70 (447)
T PRK02472 3 YQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQE-----LLEEGIKVICGSHP--LE---LLDE-DFD 70 (447)
T ss_pred cCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHH-----HHhcCCEEEeCCCC--HH---HhcC-cCC
Confidence 4688999999976 99999999999999999999765332221111 12234555443321 11 1222 359
Q ss_pred EEEEcccccC
Q 042406 157 HVMHLAAQAG 166 (424)
Q Consensus 157 ~vi~~Ag~~~ 166 (424)
.||+++|+..
T Consensus 71 ~vV~s~gi~~ 80 (447)
T PRK02472 71 LMVKNPGIPY 80 (447)
T ss_pred EEEECCCCCC
Confidence 9999999743
No 379
>PRK08223 hypothetical protein; Validated
Probab=96.78 E-value=0.022 Score=53.17 Aligned_cols=113 Identities=14% Similarity=0.069 Sum_probs=69.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchh-----------------h-hHHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYE-----------------T-SLKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-----------------~-~~~~~~~~~~~~~~v~~~ 136 (424)
.+...+|+|.|+ |++|..+++.|+..|. +++++|.+.-... . .......+.+..-+++.+
T Consensus 24 kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~iNP~v~V~~~ 102 (287)
T PRK08223 24 RLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDINPELEIRAF 102 (287)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHHCCCCEEEEE
Confidence 356678999998 9999999999999995 6888877542110 0 011111122333456666
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV 209 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v 209 (424)
...++. +.+.+++++. |+||.+.-.. ++..-..+-++|.+.+. -+|+.|..+.
T Consensus 103 ~~~l~~-~n~~~ll~~~--DlVvD~~D~~---------------~~~~r~~ln~~c~~~~i--P~V~~~~~g~ 155 (287)
T PRK08223 103 PEGIGK-ENADAFLDGV--DVYVDGLDFF---------------EFDARRLVFAACQQRGI--PALTAAPLGM 155 (287)
T ss_pred ecccCc-cCHHHHHhCC--CEEEECCCCC---------------cHHHHHHHHHHHHHcCC--CEEEEeccCC
Confidence 666653 4566778766 9998654211 11122446678888886 4777765443
No 380
>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2. UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=96.77 E-value=0.022 Score=53.98 Aligned_cols=110 Identities=20% Similarity=0.229 Sum_probs=69.6
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhh--------------hH----HHHHhhhhccCCeEEEEccCC
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYET--------------SL----KKARKGLLERAGVFVIDADIN 141 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--------------~~----~~~~~~~~~~~~v~~~~~Dl~ 141 (424)
+|+|.|+ |++|.++++.|+..|. +++++|.+.-.... .+ ...-.+....-.+..+..++.
T Consensus 1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~lNp~v~V~~~~~~i~ 79 (312)
T cd01489 1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSFNPNVKIVAYHANIK 79 (312)
T ss_pred CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHHCCCCeEEEEeccCC
Confidence 4899997 9999999999999996 78888765422110 00 111112223446777778887
Q ss_pred CHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 142 DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 142 d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
+.....+++++. |+||.+... ...-..+-+.|...+. .+|...+.+.+|.
T Consensus 80 ~~~~~~~f~~~~--DvVv~a~Dn-----------------~~ar~~in~~c~~~~i--p~I~~gt~G~~G~ 129 (312)
T cd01489 80 DPDFNVEFFKQF--DLVFNALDN-----------------LAARRHVNKMCLAADV--PLIESGTTGFLGQ 129 (312)
T ss_pred CccchHHHHhcC--CEEEECCCC-----------------HHHHHHHHHHHHHCCC--CEEEEecCcceeE
Confidence 754445677766 999987521 1122335566777765 5888777766553
No 381
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.74 E-value=0.0014 Score=58.41 Aligned_cols=38 Identities=32% Similarity=0.342 Sum_probs=34.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
.+++||+|+|+|. |.+|+.+++.|.+.|++|++.+++.
T Consensus 24 ~~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~ 61 (200)
T cd01075 24 DSLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE 61 (200)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3578999999998 7999999999999999999998864
No 382
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.73 E-value=0.023 Score=57.32 Aligned_cols=120 Identities=14% Similarity=0.059 Sum_probs=71.1
Q ss_pred EEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEEcc-
Q 042406 84 VTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMHLA- 162 (424)
Q Consensus 84 ItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~~A- 162 (424)
|+||+|++|..+++.|...|++|+...+.... .. ..+..+++.+++-+
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~---------~~----------------------~~~~~~~~~~~~d~~ 91 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLT---------WA----------------------AGWGDRFGALVFDAT 91 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCccccc---------cc----------------------cCcCCcccEEEEECC
Confidence 88999999999999999999999987652210 00 00011234322221
Q ss_pred cccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHH
Q 042406 163 AQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIA 242 (424)
Q Consensus 163 g~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~ 242 (424)
+. ..++..... .......++.+.. ..+||+++|..... ....|+.+|.+.+.++
T Consensus 92 ~~-------~~~~~l~~~-~~~~~~~l~~l~~---~griv~i~s~~~~~---------------~~~~~~~akaal~gl~ 145 (450)
T PRK08261 92 GI-------TDPADLKAL-YEFFHPVLRSLAP---CGRVVVLGRPPEAA---------------ADPAAAAAQRALEGFT 145 (450)
T ss_pred CC-------CCHHHHHHH-HHHHHHHHHhccC---CCEEEEEccccccC---------------CchHHHHHHHHHHHHH
Confidence 11 111111111 1112222333322 23899999865531 1235999999999999
Q ss_pred HHHHHHh--CCcEEEEEecc
Q 042406 243 HAYNHIY--GLSITGLRFFT 260 (424)
Q Consensus 243 ~~~~~~~--~i~~~~vrp~~ 260 (424)
+.+++++ ++++..|.|+.
T Consensus 146 rsla~E~~~gi~v~~i~~~~ 165 (450)
T PRK08261 146 RSLGKELRRGATAQLVYVAP 165 (450)
T ss_pred HHHHHHhhcCCEEEEEecCC
Confidence 9998875 68888888753
No 383
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.73 E-value=0.0087 Score=52.20 Aligned_cols=71 Identities=30% Similarity=0.310 Sum_probs=48.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
...+.|++|.|.|. |-||+.+++.|..-|.+|++.+|...... .. ....+ ...++++++++.
T Consensus 31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~------~~---~~~~~--------~~~~l~ell~~a 92 (178)
T PF02826_consen 31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE------GA---DEFGV--------EYVSLDELLAQA 92 (178)
T ss_dssp BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH------HH---HHTTE--------EESSHHHHHHH-
T ss_pred ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh------hc---ccccc--------eeeehhhhcchh
Confidence 45689999999996 99999999999999999999999654211 00 00111 122566778877
Q ss_pred CccEEEEcccc
Q 042406 154 AFTHVMHLAAQ 164 (424)
Q Consensus 154 ~~d~vi~~Ag~ 164 (424)
|+|+.+...
T Consensus 93 --Div~~~~pl 101 (178)
T PF02826_consen 93 --DIVSLHLPL 101 (178)
T ss_dssp --SEEEE-SSS
T ss_pred --hhhhhhhcc
Confidence 998887754
No 384
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=96.72 E-value=0.025 Score=50.13 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=69.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhh------------------hHHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYET------------------SLKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------------------~~~~~~~~~~~~~~v~~~ 136 (424)
.+..++|+|.|+ |++|.++++.|+..|. +++++|...-.... ...+.-.+.+..-.++.+
T Consensus 18 ~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~lNp~v~i~~~ 96 (197)
T cd01492 18 RLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRALNPRVKVSVD 96 (197)
T ss_pred HHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHHCCCCEEEEE
Confidence 356678999987 6699999999999996 68888865321100 001111122233345556
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
...+.+ ...+.+++. |+||.+... .+ .-..+-+.|++.+. .+|+.++.+.+|.
T Consensus 97 ~~~~~~--~~~~~~~~~--dvVi~~~~~---------~~--------~~~~ln~~c~~~~i--p~i~~~~~G~~G~ 149 (197)
T cd01492 97 TDDISE--KPEEFFSQF--DVVVATELS---------RA--------ELVKINELCRKLGV--KFYATGVHGLFGF 149 (197)
T ss_pred ecCccc--cHHHHHhCC--CEEEECCCC---------HH--------HHHHHHHHHHHcCC--CEEEEEecCCEEE
Confidence 555552 245566765 999876421 11 12335577888886 4888888777774
No 385
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=96.69 E-value=0.041 Score=52.31 Aligned_cols=113 Identities=16% Similarity=0.105 Sum_probs=71.2
Q ss_pred EEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhh--ccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLL--ERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
|.|.|+ |.+|..++..|+..|. +|+++|++.+...... ....... ......+. . -.|. +.+++. |+|
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~-~dl~~~~~~~~~~~~I~-~-t~d~----~~l~dA--DiV 70 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKA-LDISQAAPILGSDTKVT-G-TNDY----EDIAGS--DVV 70 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHH-HHHHHhhhhcCCCeEEE-E-cCCH----HHhCCC--CEE
Confidence 468998 9999999999998876 9999999865432111 1111111 11111211 1 1232 236666 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|.+++.... ...+....+.-|..-...+++.+.+......+|.+|-
T Consensus 71 Iit~g~p~~--~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~sN 116 (300)
T cd01339 71 VITAGIPRK--PGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVTN 116 (300)
T ss_pred EEecCCCCC--cCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999986432 1233345777788888889988888776546666664
No 386
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=96.69 E-value=0.029 Score=53.17 Aligned_cols=164 Identities=15% Similarity=0.082 Sum_probs=99.0
Q ss_pred EEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhccCccEEEE
Q 042406 84 VTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLL-ERAGVFVIDADINDKSLLDKIFNVVAFTHVMH 160 (424)
Q Consensus 84 ItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~ 160 (424)
|.|+ |.||..++..|+..+. +++++|++.+.............. ....+.+.. .| .+.+++. |+||-
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~da--DivVi 70 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDA--DLVVI 70 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCC--CEEEE
Confidence 4565 9999999999998874 799999976654433322222111 112333332 33 3456666 99999
Q ss_pred cccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc---ccCCCCCCCCCCCCCCCCCCChHHH-HHH
Q 042406 161 LAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS---VYGVNKKVPFSEKDRTDQPASLYAA-TKK 236 (424)
Q Consensus 161 ~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~---vyg~~~~~~~~e~~~~~~~~~~Y~~-sK~ 236 (424)
+||.... ...+..+.+..|..-...+.+.+.+++....++.+|... .|-... .. ..++....|. +.+
T Consensus 71 tag~~rk--~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsNP~d~~t~~~~~-----~s--g~p~~~viG~gt~L 141 (299)
T TIGR01771 71 TAGAPQK--PGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATNPVDILTYVAWK-----LS--GFPKNRVIGSGTVL 141 (299)
T ss_pred CCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHH-----Hh--CCCHHHEEeccchH
Confidence 9997432 233557899999999999999999888776777777511 000000 00 0011112222 333
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
..-++...+++..++...-++. .|+|..+.
T Consensus 142 Ds~R~~~~la~~l~v~~~~V~~-~v~GeHG~ 171 (299)
T TIGR01771 142 DTARLRYLLAEKLGVDPQSVHA-YIIGEHGD 171 (299)
T ss_pred HHHHHHHHHHHHhCcCcCeEEE-EEEecCCC
Confidence 3345555566667888888885 58887643
No 387
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=96.69 E-value=0.031 Score=51.85 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=26.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEE-eCC
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR-GDGVLGL-DNF 112 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~-~r~ 112 (424)
++|.|+|++|.+|+.+++.+.+. +.+++.+ +++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~ 36 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRP 36 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 68999999999999999988875 5777664 443
No 388
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.68 E-value=0.0056 Score=57.35 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=33.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDN 111 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r 111 (424)
..+||+|+|.|++|.+|+.++..|+++|+.|+++.|
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~ 191 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS 191 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence 578999999999999999999999999999998876
No 389
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.68 E-value=0.0051 Score=57.81 Aligned_cols=40 Identities=23% Similarity=0.258 Sum_probs=35.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCch
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYY 116 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~ 116 (424)
...+++++|+|+ |++|+.++..|++.| .+|++++|+.++.
T Consensus 120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a 160 (278)
T PRK00258 120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERA 160 (278)
T ss_pred CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 467889999997 999999999999999 7999999976543
No 390
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=96.60 E-value=0.018 Score=55.44 Aligned_cols=76 Identities=26% Similarity=0.224 Sum_probs=48.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC---HHHHHHHhhccCc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND---KSLLDKIFNVVAF 155 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d---~~~v~~~~~~~~~ 155 (424)
+.+|||+||+|++|...++.+.+.|+.+++...++++.+ ....+. .-+.+ |..+ .+.+++...+.++
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~------~~~~lG--Ad~vi--~y~~~~~~~~v~~~t~g~gv 212 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE------LLKELG--ADHVI--NYREEDFVEQVRELTGGKGV 212 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH------HHHhcC--CCEEE--cCCcccHHHHHHHHcCCCCc
Confidence 788999999999999999999999977666655332111 111111 11122 2333 2344555554467
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+|+..-|-
T Consensus 213 Dvv~D~vG~ 221 (326)
T COG0604 213 DVVLDTVGG 221 (326)
T ss_pred eEEEECCCH
Confidence 999998774
No 391
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.58 E-value=0.014 Score=47.67 Aligned_cols=95 Identities=15% Similarity=0.204 Sum_probs=54.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHh-CCCeEEE-EeCCCCchh-hhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKK-RGDGVLG-LDNFNNYYE-TSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~-~g~~V~~-~~r~~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+|+|.|++|-+|+.+++.+.+ .|.++.. ++|..+... ........ .... .+.-.++++++++.. |
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~--~~~~-------~~~v~~~l~~~~~~~--D 69 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAG--IGPL-------GVPVTDDLEELLEEA--D 69 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCT--SST--------SSBEBS-HHHHTTH---S
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhC--cCCc-------ccccchhHHHhcccC--C
Confidence 5799999999999999999999 5777554 455442111 11110000 0011 121225677788875 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
++|...- -..+...++.|.+++. .+|.-+
T Consensus 70 VvIDfT~------------------p~~~~~~~~~~~~~g~--~~ViGT 98 (124)
T PF01113_consen 70 VVIDFTN------------------PDAVYDNLEYALKHGV--PLVIGT 98 (124)
T ss_dssp EEEEES-------------------HHHHHHHHHHHHHHT---EEEEE-
T ss_pred EEEEcCC------------------hHHhHHHHHHHHhCCC--CEEEEC
Confidence 9998752 1245567788888875 455333
No 392
>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou
Probab=96.54 E-value=0.042 Score=49.99 Aligned_cols=110 Identities=15% Similarity=0.079 Sum_probs=68.3
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhh----------h----H----HHHHhhhhccCCeEEEEccCC
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYET----------S----L----KKARKGLLERAGVFVIDADIN 141 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----------~----~----~~~~~~~~~~~~v~~~~~Dl~ 141 (424)
+|+|.|+ |++|.++++.|+..|. +++++|.+.-.... . + ...-.+....-++..+..++.
T Consensus 1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~np~v~i~~~~~~i~ 79 (234)
T cd01484 1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDRNPNCKVVPYQNKVG 79 (234)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHHCCCCEEEEEeccCC
Confidence 4889986 9999999999999996 68888775422110 0 0 001111223345677777776
Q ss_pred CHHHH-HHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 142 DKSLL-DKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 142 d~~~v-~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
+.+.. .+++++. |+||.+.. |+..-..+-+.|...+. .+|..++.+.+|.
T Consensus 80 ~~~~~~~~f~~~~--DvVi~a~D-----------------n~~aR~~ln~~c~~~~i--plI~~g~~G~~G~ 130 (234)
T cd01484 80 PEQDFNDTFFEQF--HIIVNALD-----------------NIIARRYVNGMLIFLIV--PLIESGTEGFKGN 130 (234)
T ss_pred hhhhchHHHHhCC--CEEEECCC-----------------CHHHHHHHHHHHHHcCC--CEEEEcccCCceE
Confidence 54332 4566755 99998742 22223445666777775 5888877666653
No 393
>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated
Probab=96.52 E-value=0.034 Score=54.92 Aligned_cols=114 Identities=18% Similarity=0.106 Sum_probs=71.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhh--------------hH----HHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYET--------------SL----KKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--------------~~----~~~~~~~~~~~~v~~~ 136 (424)
.+...+|+|.|+ |++|..+++.|+..|. +++++|.+.-.... .+ .+.-.+.+..-+++.+
T Consensus 39 ~L~~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~i~~~ 117 (392)
T PRK07878 39 RLKNARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEINPLVNVRLH 117 (392)
T ss_pred HHhcCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHhCCCcEEEEE
Confidence 356678999997 9999999999999996 67777765311100 00 0011112223345556
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
...++. +...+++++. |+||.+... ...-..+-++|.+.+. .+|+.+..+.+|.
T Consensus 118 ~~~i~~-~~~~~~~~~~--D~Vvd~~d~-----------------~~~r~~ln~~~~~~~~--p~v~~~~~g~~G~ 171 (392)
T PRK07878 118 EFRLDP-SNAVELFSQY--DLILDGTDN-----------------FATRYLVNDAAVLAGK--PYVWGSIYRFEGQ 171 (392)
T ss_pred eccCCh-hHHHHHHhcC--CEEEECCCC-----------------HHHHHHHHHHHHHcCC--CEEEEEeccCEEE
Confidence 666654 4566777766 999987532 1122335567788775 5888888777664
No 394
>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]
Probab=96.49 E-value=0.055 Score=48.56 Aligned_cols=116 Identities=21% Similarity=0.180 Sum_probs=72.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCch------hhh-----------HHHHHhhhhccCCeEEEEc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYY------ETS-----------LKKARKGLLERAGVFVIDA 138 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~------~~~-----------~~~~~~~~~~~~~v~~~~~ 138 (424)
++..+|+|.|. |++|++.++.|++.|. +++++|-+.-.. ..+ .-+.+.. .-++.+++...
T Consensus 28 l~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~-~InP~c~V~~~ 105 (263)
T COG1179 28 LKQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIK-QINPECEVTAI 105 (263)
T ss_pred HhhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHH-hhCCCceEeeh
Confidence 45667999997 9999999999999995 677666533111 000 0001111 11344444333
Q ss_pred -cCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCC
Q 042406 139 -DINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKV 216 (424)
Q Consensus 139 -Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~ 216 (424)
|.-.++.+++++.. .+|+||.+.- |+..=..|+..|.+++. -++||++.-+..++.
T Consensus 106 ~~f~t~en~~~~~~~-~~DyvIDaiD-----------------~v~~Kv~Li~~c~~~ki----~vIss~Gag~k~DPT 162 (263)
T COG1179 106 NDFITEENLEDLLSK-GFDYVIDAID-----------------SVRAKVALIAYCRRNKI----PVISSMGAGGKLDPT 162 (263)
T ss_pred HhhhCHhHHHHHhcC-CCCEEEEchh-----------------hhHHHHHHHHHHHHcCC----CEEeeccccCCCCCc
Confidence 34467777777776 7899998752 23334568888998765 366777776665543
No 395
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.48 E-value=0.0087 Score=57.56 Aligned_cols=29 Identities=34% Similarity=0.455 Sum_probs=25.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGV 106 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V 106 (424)
++++|.|+||||++|+.|++.|.+++|.+
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~ 31 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPV 31 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCc
Confidence 34789999999999999999999887643
No 396
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=96.47 E-value=0.011 Score=57.17 Aligned_cols=80 Identities=20% Similarity=0.155 Sum_probs=52.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh--cc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN--VV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~--~~ 153 (424)
-.+|+.|||.||+|++|.+.++-+...|..+++.+++.+..+ .. ..++ .. ...|..+++.+++..+ .-
T Consensus 155 ~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~-----l~-k~lG--Ad--~vvdy~~~~~~e~~kk~~~~ 224 (347)
T KOG1198|consen 155 LSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE-----LV-KKLG--AD--EVVDYKDENVVELIKKYTGK 224 (347)
T ss_pred cCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH-----HH-HHcC--Cc--EeecCCCHHHHHHHHhhcCC
Confidence 346889999999999999999999999954444444332211 11 1111 11 2347888666666655 33
Q ss_pred CccEEEEccccc
Q 042406 154 AFTHVMHLAAQA 165 (424)
Q Consensus 154 ~~d~vi~~Ag~~ 165 (424)
++|+|+.|.|-.
T Consensus 225 ~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 225 GVDVVLDCVGGS 236 (347)
T ss_pred CccEEEECCCCC
Confidence 689999999863
No 397
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.47 E-value=0.013 Score=55.23 Aligned_cols=71 Identities=15% Similarity=0.192 Sum_probs=50.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+.+++++|+|. |.+|+.+++.|...|.+|++.+|+.+.... .. ..+...+ +.+.+.+.+++.
T Consensus 148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~----~~-----~~g~~~~-----~~~~l~~~l~~a-- 210 (287)
T TIGR02853 148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR----IT-----EMGLIPF-----PLNKLEEKVAEI-- 210 (287)
T ss_pred CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HH-----HCCCeee-----cHHHHHHHhccC--
Confidence 567899999998 889999999999999999999996432111 10 1122211 244566777766
Q ss_pred cEEEEccc
Q 042406 156 THVMHLAA 163 (424)
Q Consensus 156 d~vi~~Ag 163 (424)
|+||++..
T Consensus 211 DiVint~P 218 (287)
T TIGR02853 211 DIVINTIP 218 (287)
T ss_pred CEEEECCC
Confidence 99999763
No 398
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.46 E-value=0.017 Score=52.25 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=33.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY 116 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 116 (424)
|+|.|+||+|.+|..++..|++.|++|++.+|+.+..
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~ 37 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA 37 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence 6799999999999999999999999999999976543
No 399
>PRK04148 hypothetical protein; Provisional
Probab=96.45 E-value=0.033 Score=45.70 Aligned_cols=89 Identities=20% Similarity=0.274 Sum_probs=61.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
+++++++.|. | -|..++..|.+.|++|+++|.++...+. . ....+.++.+|+.+++- +.-++. |.
T Consensus 16 ~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~----a-----~~~~~~~v~dDlf~p~~--~~y~~a--~l 80 (134)
T PRK04148 16 KNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEK----A-----KKLGLNAFVDDLFNPNL--EIYKNA--KL 80 (134)
T ss_pred cCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHH----H-----HHhCCeEEECcCCCCCH--HHHhcC--CE
Confidence 4578999997 5 8999999999999999999996542111 1 22468999999998753 333333 76
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~ 198 (424)
|+-+ +.+.+. ...+++.+++.+..
T Consensus 81 iysi----------rpp~el-------~~~~~~la~~~~~~ 104 (134)
T PRK04148 81 IYSI----------RPPRDL-------QPFILELAKKINVP 104 (134)
T ss_pred EEEe----------CCCHHH-------HHHHHHHHHHcCCC
Confidence 6632 122222 24578889998876
No 400
>PRK05600 thiamine biosynthesis protein ThiF; Validated
Probab=96.45 E-value=0.042 Score=53.70 Aligned_cols=113 Identities=17% Similarity=0.180 Sum_probs=71.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhh--------------hH----HHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYET--------------SL----KKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--------------~~----~~~~~~~~~~~~v~~~ 136 (424)
.+...+|+|.|+ |++|..++..|+..|. +++++|.+.-.... .+ ...-.+.+..-+++.+
T Consensus 38 ~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~ 116 (370)
T PRK05600 38 RLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEIQPDIRVNAL 116 (370)
T ss_pred HhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHHCCCCeeEEe
Confidence 456778999997 9999999999999995 88888876311100 00 0011112233456666
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
...++ .+.+.++++++ |+||.|... ...-..+-++|.+.+. -+|+.+..+-+|
T Consensus 117 ~~~i~-~~~~~~~~~~~--DlVid~~Dn-----------------~~~r~~in~~~~~~~i--P~v~~~~~g~~G 169 (370)
T PRK05600 117 RERLT-AENAVELLNGV--DLVLDGSDS-----------------FATKFLVADAAEITGT--PLVWGTVLRFHG 169 (370)
T ss_pred eeecC-HHHHHHHHhCC--CEEEECCCC-----------------HHHHHHHHHHHHHcCC--CEEEEEEecCEE
Confidence 66665 45667788866 999988632 1122334566777775 477777654444
No 401
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.43 E-value=0.011 Score=55.20 Aligned_cols=39 Identities=26% Similarity=0.200 Sum_probs=34.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY 116 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 116 (424)
..+|+++|+|+ |++|+.++..|++.|++|++++|+.++.
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~ 153 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKA 153 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence 45789999998 8999999999999999999999975443
No 402
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=96.41 E-value=0.029 Score=53.80 Aligned_cols=77 Identities=25% Similarity=0.235 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh---ccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN---VVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~---~~~ 154 (424)
.+.+++|+|+++.+|..+++.+...|.+|++++++.+.... .. . . +.. ...|..+.+....+.+ +.+
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~----~~-~-~---~~~-~~~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLER----AK-E-L---GAD-YVIDYRKEDFVREVRELTGKRG 235 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HH-H-c---CCC-eEEecCChHHHHHHHHHhCCCC
Confidence 56789999999999999999999999999999875432211 11 1 1 111 1235555544444332 335
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|++++++|.
T Consensus 236 ~d~~i~~~g~ 245 (342)
T cd08266 236 VDVVVEHVGA 245 (342)
T ss_pred CcEEEECCcH
Confidence 7999999873
No 403
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=96.40 E-value=0.041 Score=52.14 Aligned_cols=77 Identities=22% Similarity=0.200 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHH---HHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSL---LDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---v~~~~~~~~ 154 (424)
.+++++|+|++|.+|..+++.+.+.|.+|++++++.+..+. .. . .++.. ..|..+.+. +.+...+.+
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~----~~-~----~g~~~-~~~~~~~~~~~~~~~~~~~~~ 213 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAEL----VR-Q----AGADA-VFNYRAEDLADRILAATAGQG 213 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HH-H----cCCCE-EEeCCCcCHHHHHHHHcCCCc
Confidence 57899999999999999999999999999999885432111 11 1 12211 134444333 333333336
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|.++++++.
T Consensus 214 ~d~vi~~~~~ 223 (325)
T cd08253 214 VDVIIEVLAN 223 (325)
T ss_pred eEEEEECCch
Confidence 7999999863
No 404
>PRK06849 hypothetical protein; Provisional
Probab=96.40 E-value=0.022 Score=56.26 Aligned_cols=77 Identities=17% Similarity=0.093 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEc--cCCCH----HHHHHHhh
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDA--DINDK----SLLDKIFN 151 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~--Dl~d~----~~v~~~~~ 151 (424)
+.|+|||||++..+|..+++.|.+.|++|++++.+....... ... . . .++.+ .-.|. +.+.++++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~-s~~-----~-d--~~~~~p~p~~d~~~~~~~L~~i~~ 73 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRF-SRA-----V-D--GFYTIPSPRWDPDAYIQALLSIVQ 73 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHH-HHh-----h-h--heEEeCCCCCCHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999865332110 000 0 1 12222 12232 45666667
Q ss_pred ccCccEEEEccc
Q 042406 152 VVAFTHVMHLAA 163 (424)
Q Consensus 152 ~~~~d~vi~~Ag 163 (424)
+.++|+||-+..
T Consensus 74 ~~~id~vIP~~e 85 (389)
T PRK06849 74 RENIDLLIPTCE 85 (389)
T ss_pred HcCCCEEEECCh
Confidence 768899998764
No 405
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.38 E-value=0.043 Score=55.36 Aligned_cols=77 Identities=21% Similarity=0.213 Sum_probs=56.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
...++|+|.|+ |.+|+.+++.|.+.|++|++++++.+.... ... ...++.++.+|.++.+.+.++--. +.|
T Consensus 229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~----~~~---~~~~~~~i~gd~~~~~~L~~~~~~-~a~ 299 (453)
T PRK09496 229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEE----LAE---ELPNTLVLHGDGTDQELLEEEGID-EAD 299 (453)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HHH---HCCCCeEEECCCCCHHHHHhcCCc-cCC
Confidence 45789999998 999999999999999999999985432211 111 124678899999999888664322 448
Q ss_pred EEEEcc
Q 042406 157 HVMHLA 162 (424)
Q Consensus 157 ~vi~~A 162 (424)
.||-+.
T Consensus 300 ~vi~~~ 305 (453)
T PRK09496 300 AFIALT 305 (453)
T ss_pred EEEECC
Confidence 888554
No 406
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.37 E-value=0.013 Score=54.65 Aligned_cols=58 Identities=17% Similarity=0.210 Sum_probs=48.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.++||+|+|+|.++.+|+.++..|.++|+.|+++.+.. ..+.+.+++.
T Consensus 155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t------------------------------~~l~~~~~~A-- 202 (286)
T PRK14175 155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS------------------------------KDMASYLKDA-- 202 (286)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------------------------hhHHHHHhhC--
Confidence 57899999999999999999999999999999998621 2355667766
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||...|..
T Consensus 203 DIVIsAvg~p 212 (286)
T PRK14175 203 DVIVSAVGKP 212 (286)
T ss_pred CEEEECCCCC
Confidence 9999988763
No 407
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=96.35 E-value=0.016 Score=56.73 Aligned_cols=76 Identities=14% Similarity=0.109 Sum_probs=54.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
..+.+|+|+|+ |.+|...++.|...|.+|++++|+.++.+. .. ... + ..+..+..+.+.+.+.+.+. |
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~----l~-~~~---g-~~v~~~~~~~~~l~~~l~~a--D 232 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQ----LD-AEF---G-GRIHTRYSNAYEIEDAVKRA--D 232 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH----HH-Hhc---C-ceeEeccCCHHHHHHHHccC--C
Confidence 35567999987 899999999999999999999985432111 11 001 1 12334566778888888876 9
Q ss_pred EEEEcccc
Q 042406 157 HVMHLAAQ 164 (424)
Q Consensus 157 ~vi~~Ag~ 164 (424)
+||++++.
T Consensus 233 vVI~a~~~ 240 (370)
T TIGR00518 233 LLIGAVLI 240 (370)
T ss_pred EEEEcccc
Confidence 99998855
No 408
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.30 E-value=0.0094 Score=56.09 Aligned_cols=76 Identities=17% Similarity=0.035 Sum_probs=49.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..++++|+|.|+ |+.|++++..|++.|. +|++++|+.++.+......... ...+.+.. . +.+.+.+.+.
T Consensus 124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~---~~~~~~~~--~---~~~~~~~~~a- 193 (284)
T PRK12549 124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR---FPAARATA--G---SDLAAALAAA- 193 (284)
T ss_pred CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh---CCCeEEEe--c---cchHhhhCCC-
Confidence 356789999998 8899999999999997 7999999765443322221111 11222221 1 2233445545
Q ss_pred ccEEEEcc
Q 042406 155 FTHVMHLA 162 (424)
Q Consensus 155 ~d~vi~~A 162 (424)
|+|||+.
T Consensus 194 -DiVInaT 200 (284)
T PRK12549 194 -DGLVHAT 200 (284)
T ss_pred -CEEEECC
Confidence 9999994
No 409
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=96.30 E-value=0.035 Score=53.10 Aligned_cols=36 Identities=42% Similarity=0.478 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
.+.+++|+||+|.+|..+++.+...|.+|++++++.
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~ 197 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP 197 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH
Confidence 467899999999999999999999999999998754
No 410
>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function. One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].
Probab=96.29 E-value=0.18 Score=47.31 Aligned_cols=166 Identities=14% Similarity=0.095 Sum_probs=92.2
Q ss_pred CeEEEEcC-CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 80 LTVLVTGA-AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 80 ~~vlItGg-~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
..|+|.|. +-=|++.+|..|-+||+-|++...+.+.... ... .....+.....|..++..+...+...
T Consensus 4 evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~----ve~--e~~~dI~~L~ld~~~~~~~~~~l~~f~~~L~ 77 (299)
T PF08643_consen 4 EVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKY----VES--EDRPDIRPLWLDDSDPSSIHASLSRFASLLS 77 (299)
T ss_pred eEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHH----HHh--ccCCCCCCcccCCCCCcchHHHHHHHHHHhc
Confidence 46899995 7899999999999999999999875432211 111 12455777777886655444333322
Q ss_pred C--------ccEEEEcccccCc---hh--------hccChHHHHHHHHHHH----HHHHHHHHhcC-CCCeEEEecCCcc
Q 042406 154 A--------FTHVMHLAAQAGV---RY--------AMQNPNSYVESNIAGF----VNLLETCKSSD-PQPAIVWASSSSV 209 (424)
Q Consensus 154 ~--------~d~vi~~Ag~~~~---~~--------~~~~~~~~~~~N~~g~----~~ll~a~~~~~-~~~~~v~~SS~~v 209 (424)
. ..+..++.|+.-. .+ ..+.....++.|+.-. ..++...+... .+.++|.+.-+-.
T Consensus 78 ~p~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ 157 (299)
T PF08643_consen 78 RPHVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSIS 157 (299)
T ss_pred CCCCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchh
Confidence 1 2234444443211 11 0111234556566554 44555555521 2235555543222
Q ss_pred cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEecccc
Q 042406 210 YGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVY 262 (424)
Q Consensus 210 yg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~ 262 (424)
...+. ...++-.....+.+.++..+.++. +++++.++.|++-
T Consensus 158 ssl~~-----------PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~ 202 (299)
T PF08643_consen 158 SSLNP-----------PFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLD 202 (299)
T ss_pred hccCC-----------CccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeec
Confidence 21110 122444455556666666666554 5999999999863
No 411
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=96.28 E-value=0.02 Score=54.95 Aligned_cols=36 Identities=42% Similarity=0.479 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
.+.+|+|+||+|.+|..+++.+...|.+|++++++.
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~ 173 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSD 173 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 577899999999999999999888999999988754
No 412
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.28 E-value=0.019 Score=53.52 Aligned_cols=101 Identities=18% Similarity=0.188 Sum_probs=66.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.||++.|+|+.| ||.--++...+-|++|++++++.++.++..+ .-+.+.+..-..|++.++++.+.. |.
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~--------~LGAd~fv~~~~d~d~~~~~~~~~--dg 249 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIK--------SLGADVFVDSTEDPDIMKAIMKTT--DG 249 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHH--------hcCcceeEEecCCHHHHHHHHHhh--cC
Confidence 799999999977 9988888777889999999997643222221 223444433334888898888877 77
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSS 207 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~ 207 (424)
++|++.... .. ....+++.++..| ++|+++-.
T Consensus 250 ~~~~v~~~a----~~-----------~~~~~~~~lk~~G---t~V~vg~p 281 (360)
T KOG0023|consen 250 GIDTVSNLA----EH-----------ALEPLLGLLKVNG---TLVLVGLP 281 (360)
T ss_pred cceeeeecc----cc-----------chHHHHHHhhcCC---EEEEEeCc
Confidence 777664221 00 1123455566554 78888853
No 413
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.27 E-value=0.028 Score=55.60 Aligned_cols=74 Identities=16% Similarity=0.216 Sum_probs=56.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
...|+|+|+|+ |.+|+.+++.+.+.|++|++++.+.+..... . .-.++.+|..|.+.+.+++++.++|
T Consensus 10 ~~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~--------~---ad~~~~~~~~d~~~l~~~~~~~~id 77 (395)
T PRK09288 10 PSATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAMQ--------V---AHRSHVIDMLDGDALRAVIEREKPD 77 (395)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCchHH--------h---hhheEECCCCCHHHHHHHHHHhCCC
Confidence 35678999997 7899999999999999999999855321110 0 0135678889999999999877789
Q ss_pred EEEEcc
Q 042406 157 HVMHLA 162 (424)
Q Consensus 157 ~vi~~A 162 (424)
.|+-..
T Consensus 78 ~vi~~~ 83 (395)
T PRK09288 78 YIVPEI 83 (395)
T ss_pred EEEEee
Confidence 988643
No 414
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.22 E-value=0.016 Score=55.97 Aligned_cols=68 Identities=18% Similarity=0.128 Sum_probs=43.5
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEE---EEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGDGVL---GLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
+|+|.||+|++|+.|++.|.+++|.++ .+.+..+.... ....+......|+. . ..++++ |+
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~---------~~~~~~~~~~~~~~-~----~~~~~~--D~ 64 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRK---------VTFKGKELEVNEAK-I----ESFEGI--DI 64 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCe---------eeeCCeeEEEEeCC-h----HHhcCC--CE
Confidence 489999999999999999999888644 44453221111 01123445555664 1 234544 99
Q ss_pred EEEcccc
Q 042406 158 VMHLAAQ 164 (424)
Q Consensus 158 vi~~Ag~ 164 (424)
||-+++.
T Consensus 65 v~~a~g~ 71 (339)
T TIGR01296 65 ALFSAGG 71 (339)
T ss_pred EEECCCH
Confidence 9999875
No 415
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=96.20 E-value=0.029 Score=55.10 Aligned_cols=35 Identities=23% Similarity=0.203 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNF 112 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~ 112 (424)
..++|.|.||.|.+|+.+++.|.+.|+.|++.+|+
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~ 131 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQD 131 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCC
Confidence 56789999999999999999999999999999983
No 416
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=96.20 E-value=0.023 Score=55.10 Aligned_cols=33 Identities=18% Similarity=0.344 Sum_probs=28.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeC
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDN 111 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r 111 (424)
+++|+|.||||++|+.+++.|.++ +.+++.+.+
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~ 35 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTS 35 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEEC
Confidence 378999999999999999999987 578777665
No 417
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=96.16 E-value=0.026 Score=53.46 Aligned_cols=70 Identities=23% Similarity=0.204 Sum_probs=49.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...+++++|.|. |.+|+.++..|.+.|.+|++.+|+.+.. .... ..+..++ +.+.+.+.+.+.
T Consensus 149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~------~~~~---~~G~~~~-----~~~~l~~~l~~a-- 211 (296)
T PRK08306 149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHL------ARIT---EMGLSPF-----HLSELAEEVGKI-- 211 (296)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH------HHHH---HcCCeee-----cHHHHHHHhCCC--
Confidence 356899999997 8899999999999999999999964311 1111 1122322 234566777766
Q ss_pred cEEEEcc
Q 042406 156 THVMHLA 162 (424)
Q Consensus 156 d~vi~~A 162 (424)
|+||+++
T Consensus 212 DiVI~t~ 218 (296)
T PRK08306 212 DIIFNTI 218 (296)
T ss_pred CEEEECC
Confidence 9999985
No 418
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.15 E-value=0.022 Score=55.24 Aligned_cols=101 Identities=12% Similarity=0.083 Sum_probs=56.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEE-eCCCCchhhhHHHHHhhhhccCCeEEE-EccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR-GDGVLGL-DNFNNYYETSLKKARKGLLERAGVFVI-DADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+|.|.||||++|..+++.|.++ +.+++.+ ++..+.... .... .+.+... ..++.+. ...+++++ +|
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~-~~~~------~~~l~~~~~~~~~~~-~~~~~~~~--~D 70 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKP-VSEV------HPHLRGLVDLNLEPI-DEEEIAED--AD 70 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCC-hHHh------CccccccCCceeecC-CHHHhhcC--CC
Confidence 57999999999999999999987 5677744 442211111 1000 1111111 1112211 12334344 49
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCccc
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVY 210 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vy 210 (424)
+||-+.... ....++..+.+.|. ++|=.|+..-+
T Consensus 71 vVf~alP~~------------------~s~~~~~~~~~~G~--~VIDlS~~fR~ 104 (346)
T TIGR01850 71 VVFLALPHG------------------VSAELAPELLAAGV--KVIDLSADFRL 104 (346)
T ss_pred EEEECCCch------------------HHHHHHHHHHhCCC--EEEeCChhhhc
Confidence 999887531 23456666666663 78888885443
No 419
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=96.14 E-value=0.032 Score=41.45 Aligned_cols=33 Identities=30% Similarity=0.520 Sum_probs=29.9
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN 114 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~ 114 (424)
+|+|.|| |++|-.++..|.+.|.+|+++.|...
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~ 33 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDR 33 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccch
Confidence 4788887 99999999999999999999999654
No 420
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=96.12 E-value=0.088 Score=47.84 Aligned_cols=106 Identities=17% Similarity=0.156 Sum_probs=63.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhh--------------H----HHHHhhhhccCCeEEEE
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETS--------------L----KKARKGLLERAGVFVID 137 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~--------------~----~~~~~~~~~~~~v~~~~ 137 (424)
+...+|+|.|. |++|.++++.|++.|. +++++|.+.-..... + ...-.+.+..-+++.+.
T Consensus 9 L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~~~~ 87 (231)
T cd00755 9 LRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVDAVE 87 (231)
T ss_pred HhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEEEee
Confidence 45678999997 9999999999999996 788887653211100 0 00111122233455555
Q ss_pred ccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 042406 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWA 204 (424)
Q Consensus 138 ~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~ 204 (424)
..++ ++...+++.. ++|+||.+... ...-..+.+.|.+.+.+ +|..
T Consensus 88 ~~i~-~~~~~~l~~~-~~D~VvdaiD~-----------------~~~k~~L~~~c~~~~ip--~I~s 133 (231)
T cd00755 88 EFLT-PDNSEDLLGG-DPDFVVDAIDS-----------------IRAKVALIAYCRKRKIP--VISS 133 (231)
T ss_pred eecC-HhHHHHHhcC-CCCEEEEcCCC-----------------HHHHHHHHHHHHHhCCC--EEEE
Confidence 5554 3445555532 46999987532 11234577888888753 5544
No 421
>PRK07411 hypothetical protein; Validated
Probab=96.12 E-value=0.069 Score=52.69 Aligned_cols=113 Identities=17% Similarity=0.056 Sum_probs=70.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchh-----------------h-hHHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYE-----------------T-SLKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-----------------~-~~~~~~~~~~~~~~v~~~ 136 (424)
.+...+|+|.|+ |++|..+++.|+..|. +++++|.+.-... . ...+...+.+..-+++.+
T Consensus 35 ~L~~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~np~v~v~~~ 113 (390)
T PRK07411 35 RLKAASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEINPYCQVDLY 113 (390)
T ss_pred HHhcCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHHCCCCeEEEE
Confidence 356678999997 9999999999999996 6777776532110 0 001111122233456667
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
...++. +...+++.+. |+||.+... .+ .-..+-++|.+.+. -+|+.+..+-+|
T Consensus 114 ~~~~~~-~~~~~~~~~~--D~Vvd~~d~---------~~--------~r~~ln~~~~~~~~--p~v~~~~~g~~g 166 (390)
T PRK07411 114 ETRLSS-ENALDILAPY--DVVVDGTDN---------FP--------TRYLVNDACVLLNK--PNVYGSIFRFEG 166 (390)
T ss_pred ecccCH-HhHHHHHhCC--CEEEECCCC---------HH--------HHHHHHHHHHHcCC--CEEEEEEccCEE
Confidence 666664 4566777866 999988642 11 11234466777775 477776655554
No 422
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.11 E-value=0.018 Score=50.82 Aligned_cols=37 Identities=22% Similarity=0.216 Sum_probs=29.5
Q ss_pred EEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhh
Q 042406 82 VLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET 118 (424)
Q Consensus 82 vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 118 (424)
+...||+|.||..|++.|++.||+|++..|+.++...
T Consensus 3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~ 39 (211)
T COG2085 3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALA 39 (211)
T ss_pred EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHH
Confidence 4445567999999999999999999999776654333
No 423
>PRK12749 quinate/shikimate dehydrogenase; Reviewed
Probab=96.07 E-value=0.042 Score=51.82 Aligned_cols=38 Identities=16% Similarity=0.208 Sum_probs=32.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNN 114 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~ 114 (424)
..++|+++|.|+ |+.+++++-.|+..|. +|++++|+.+
T Consensus 121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~ 159 (288)
T PRK12749 121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDE 159 (288)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCcc
Confidence 357889999997 7779999999999995 8999999754
No 424
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=96.06 E-value=0.021 Score=48.54 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=30.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDN 111 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r 111 (424)
..+||+|+|.|.+..+|+.|+..|.++|+.|++...
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~ 68 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHS 68 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-T
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccC
Confidence 378999999999999999999999999999999876
No 425
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.06 E-value=0.041 Score=52.60 Aligned_cols=38 Identities=21% Similarity=0.129 Sum_probs=33.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchh
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE 117 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 117 (424)
.++|.|.|+ |-+|..++..|+..|++|++.|++.+...
T Consensus 7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~ 44 (321)
T PRK07066 7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEA 44 (321)
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHH
Confidence 468999997 99999999999999999999999775443
No 426
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=96.05 E-value=0.078 Score=51.19 Aligned_cols=37 Identities=35% Similarity=0.435 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
..|.+|+|+||+|.+|..+++.+...|.+|++++++.
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~ 186 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSD 186 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 3578999999999999999999999999999988754
No 427
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=96.05 E-value=0.043 Score=57.40 Aligned_cols=72 Identities=15% Similarity=0.109 Sum_probs=55.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d~ 157 (424)
..+|+|.|. |-+|+.+++.|.++|++++++|.+.+..+. ....+..++.+|.+|++.++++ +++ .|.
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~---------~~~~g~~v~~GDat~~~~L~~agi~~--A~~ 467 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNL---------MRKYGYKVYYGDATQLELLRAAGAEK--AEA 467 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHH---------HHhCCCeEEEeeCCCHHHHHhcCCcc--CCE
Confidence 457999996 999999999999999999999985432211 1224678999999999988875 343 488
Q ss_pred EEEcc
Q 042406 158 VMHLA 162 (424)
Q Consensus 158 vi~~A 162 (424)
+|-+-
T Consensus 468 vv~~~ 472 (601)
T PRK03659 468 IVITC 472 (601)
T ss_pred EEEEe
Confidence 77653
No 428
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.04 E-value=0.021 Score=53.69 Aligned_cols=57 Identities=14% Similarity=0.137 Sum_probs=47.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...||+|.|.|.+|.+|+.++..|+++|+.|+++.+... .+.++.++.
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~------------------------------~l~e~~~~A-- 203 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST------------------------------DAKALCRQA-- 203 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC------------------------------CHHHHHhcC--
Confidence 578999999999999999999999999999999976321 245566666
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||-+.|.
T Consensus 204 DIVIsavg~ 212 (301)
T PRK14194 204 DIVVAAVGR 212 (301)
T ss_pred CEEEEecCC
Confidence 888888765
No 429
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.04 E-value=0.022 Score=56.52 Aligned_cols=76 Identities=11% Similarity=0.076 Sum_probs=53.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
.+++++|+|.|+ |.+|+.++..|.+.|. +|++..|+.++..... +... .. .....+.+.+.+.+.
T Consensus 178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La-----~~~~--~~-----~~~~~~~l~~~l~~a- 243 (414)
T PRK13940 178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKIT-----SAFR--NA-----SAHYLSELPQLIKKA- 243 (414)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-----HHhc--CC-----eEecHHHHHHHhccC-
Confidence 467899999998 9999999999999995 7899988643322211 1111 11 223345667778877
Q ss_pred ccEEEEcccccC
Q 042406 155 FTHVMHLAAQAG 166 (424)
Q Consensus 155 ~d~vi~~Ag~~~ 166 (424)
|+||++.+...
T Consensus 244 -DiVI~aT~a~~ 254 (414)
T PRK13940 244 -DIIIAAVNVLE 254 (414)
T ss_pred -CEEEECcCCCC
Confidence 99999987644
No 430
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=96.03 E-value=0.043 Score=56.99 Aligned_cols=71 Identities=14% Similarity=0.176 Sum_probs=53.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
-+++|.|+ |-+|+.+++.|.++|++|+++|.+++..+. ....+..++.+|.+|++.++++--+ +.|.++
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~---------~~~~g~~~i~GD~~~~~~L~~a~i~-~a~~vi 486 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDE---------LRERGIRAVLGNAANEEIMQLAHLD-CARWLL 486 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHH---------HHHCCCeEEEcCCCCHHHHHhcCcc-ccCEEE
Confidence 46899987 999999999999999999999985432111 1224789999999999888765321 347766
Q ss_pred Ec
Q 042406 160 HL 161 (424)
Q Consensus 160 ~~ 161 (424)
-+
T Consensus 487 v~ 488 (558)
T PRK10669 487 LT 488 (558)
T ss_pred EE
Confidence 44
No 431
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.98 E-value=0.063 Score=47.92 Aligned_cols=72 Identities=22% Similarity=0.234 Sum_probs=50.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+++++|+|.|| |-+|..-++.|++.|++|++++.... +.... .....++.++..+.... .+++.
T Consensus 6 ~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~---~~l~~----l~~~~~i~~~~~~~~~~-----dl~~~-- 70 (205)
T TIGR01470 6 NLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELE---SELTL----LAEQGGITWLARCFDAD-----ILEGA-- 70 (205)
T ss_pred EcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCC---HHHHH----HHHcCCEEEEeCCCCHH-----HhCCc--
Confidence 367899999998 99999999999999999999986433 11111 11234788888887632 24444
Q ss_pred cEEEEcc
Q 042406 156 THVMHLA 162 (424)
Q Consensus 156 d~vi~~A 162 (424)
+.||-+-
T Consensus 71 ~lVi~at 77 (205)
T TIGR01470 71 FLVIAAT 77 (205)
T ss_pred EEEEECC
Confidence 7777543
No 432
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.96 E-value=0.017 Score=59.21 Aligned_cols=38 Identities=24% Similarity=0.323 Sum_probs=34.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN 114 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~ 114 (424)
..++|+++|+|+ |++|+.++..|++.|++|++++|+.+
T Consensus 376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e 413 (529)
T PLN02520 376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYE 413 (529)
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 367899999999 89999999999999999999998643
No 433
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=95.94 E-value=0.025 Score=55.55 Aligned_cols=67 Identities=24% Similarity=0.211 Sum_probs=52.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+|+|.|| |.+|+.++..+.+.|++|++++.+.+..... -.-.++.+|..|.+.+.++++.+ |+|
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~-----------~ad~~~~~~~~D~~~l~~~a~~~--dvi 67 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQ-----------VADEVIVADYDDVAALRELAEQC--DVI 67 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhH-----------hCceEEecCCCCHHHHHHHHhcC--CEE
Confidence 478999998 8999999999999999999999755421110 01246668999999999999876 876
Q ss_pred E
Q 042406 159 M 159 (424)
Q Consensus 159 i 159 (424)
.
T Consensus 68 t 68 (372)
T PRK06019 68 T 68 (372)
T ss_pred E
Confidence 4
No 434
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=95.94 E-value=0.053 Score=47.55 Aligned_cols=34 Identities=32% Similarity=0.617 Sum_probs=27.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN 114 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~ 114 (424)
|+|.|.| .|++|..++..|++.|++|+++|.+.+
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~ 34 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEE 34 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HH
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChH
Confidence 7899997 499999999999999999999998654
No 435
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=95.92 E-value=0.04 Score=47.23 Aligned_cols=65 Identities=23% Similarity=0.171 Sum_probs=43.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+|.+.|- |-+|..+++.|++.|++|++.+|+.+..+. ....++.. .++..+++++. |+|
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~---------~~~~g~~~-------~~s~~e~~~~~--dvv 61 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEA---------LAEAGAEV-------ADSPAEAAEQA--DVV 61 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHH---------HHHTTEEE-------ESSHHHHHHHB--SEE
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhh---------hHHhhhhh-------hhhhhhHhhcc--cce
Confidence 478999997 999999999999999999999995432211 11122222 23456677766 988
Q ss_pred EEcc
Q 042406 159 MHLA 162 (424)
Q Consensus 159 i~~A 162 (424)
|-+-
T Consensus 62 i~~v 65 (163)
T PF03446_consen 62 ILCV 65 (163)
T ss_dssp EE-S
T ss_pred Eeec
Confidence 8764
No 436
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=95.92 E-value=0.024 Score=52.52 Aligned_cols=72 Identities=17% Similarity=0.230 Sum_probs=57.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
..++|++.| +|=+|+.++-++-+-|.+|+.+||..+...-. -.-..+..|..|.++++.+.++.+||.
T Consensus 11 ~a~kvmLLG-SGELGKEvaIe~QRLG~eViAVDrY~~APAmq-----------VAhrs~Vi~MlD~~al~avv~rekPd~ 78 (394)
T COG0027 11 QATKVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQ-----------VAHRSYVIDMLDGDALRAVVEREKPDY 78 (394)
T ss_pred CCeEEEEec-CCccchHHHHHHHhcCCEEEEecCcCCChhhh-----------hhhheeeeeccCHHHHHHHHHhhCCCe
Confidence 445688888 59999999999999999999999976532110 112346679999999999999999999
Q ss_pred EEEc
Q 042406 158 VMHL 161 (424)
Q Consensus 158 vi~~ 161 (424)
+|--
T Consensus 79 IVpE 82 (394)
T COG0027 79 IVPE 82 (394)
T ss_pred eeeh
Confidence 8854
No 437
>PRK07877 hypothetical protein; Provisional
Probab=95.91 E-value=0.076 Score=56.15 Aligned_cols=107 Identities=17% Similarity=0.104 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchh----------------hh-HHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYE----------------TS-LKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~----------------~~-~~~~~~~~~~~~~v~~~ 136 (424)
.+...+|+|.|. | +|..++..|+..|- +++++|.+.-... .. .+..-.+.+..-+|+.+
T Consensus 104 ~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~ 181 (722)
T PRK07877 104 RLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVF 181 (722)
T ss_pred HHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEE
Confidence 456789999999 7 99999999999994 7888876542110 00 01111122334567777
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
...++ .+.+.++++++ |+||.|.-. +..=..+-++|.+.+.. +|+.|+
T Consensus 182 ~~~i~-~~n~~~~l~~~--DlVvD~~D~-----------------~~~R~~ln~~a~~~~iP--~i~~~~ 229 (722)
T PRK07877 182 TDGLT-EDNVDAFLDGL--DVVVEECDS-----------------LDVKVLLREAARARRIP--VLMATS 229 (722)
T ss_pred eccCC-HHHHHHHhcCC--CEEEECCCC-----------------HHHHHHHHHHHHHcCCC--EEEEcC
Confidence 77776 67888899876 999998632 11223455678888764 666664
No 438
>PRK14852 hypothetical protein; Provisional
Probab=95.91 E-value=0.11 Score=56.22 Aligned_cols=113 Identities=11% Similarity=0.002 Sum_probs=70.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCch-----------------hh-hHHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYY-----------------ET-SLKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~-~~~~~~~~~~~~~~v~~~ 136 (424)
.+...+|+|.|. |++|..+++.|+..|. +++++|.+.-.. +. ...+.-.+.+..-+++.+
T Consensus 329 kL~~srVlVvGl-GGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~INP~v~I~~~ 407 (989)
T PRK14852 329 RLLRSRVAIAGL-GGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSVNPFLDIRSF 407 (989)
T ss_pred HHhcCcEEEECC-cHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHHCCCCeEEEE
Confidence 467789999996 9999999999999996 566666543111 00 011111122334456667
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV 209 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v 209 (424)
...+ +.+.+.++++++ |+||.+.-... ...-..+.+.|.+.++ -+|+.++.+-
T Consensus 408 ~~~I-~~en~~~fl~~~--DiVVDa~D~~~---------------~~~rr~l~~~c~~~~I--P~I~ag~~G~ 460 (989)
T PRK14852 408 PEGV-AAETIDAFLKDV--DLLVDGIDFFA---------------LDIRRRLFNRALELGI--PVITAGPLGY 460 (989)
T ss_pred ecCC-CHHHHHHHhhCC--CEEEECCCCcc---------------HHHHHHHHHHHHHcCC--CEEEeecccc
Confidence 6666 456788888877 99998653211 1112345667777776 4777666443
No 439
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.88 E-value=0.044 Score=53.24 Aligned_cols=35 Identities=29% Similarity=0.289 Sum_probs=29.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCC
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFN 113 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~ 113 (424)
+++|+|+||+|++|+.|++.|.++.. +++.+.++.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 47899999999999999999998765 888875543
No 440
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.82 E-value=0.033 Score=46.34 Aligned_cols=58 Identities=24% Similarity=0.278 Sum_probs=47.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
+.+||+|+|.|.+.-+|+.|+..|.++|..|++.+++.. ++++..++.
T Consensus 25 ~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~------------------------------~l~~~v~~A-- 72 (140)
T cd05212 25 RLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI------------------------------QLQSKVHDA-- 72 (140)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc------------------------------CHHHHHhhC--
Confidence 578999999999999999999999999999999976221 244566666
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||-..|..
T Consensus 73 DIVvsAtg~~ 82 (140)
T cd05212 73 DVVVVGSPKP 82 (140)
T ss_pred CEEEEecCCC
Confidence 9999887753
No 441
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.77 E-value=0.035 Score=52.25 Aligned_cols=77 Identities=14% Similarity=0.074 Sum_probs=49.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.++++++|.|+ |+.|+.++..|++.|. +|+++.|+.++.+....... ....+ . .+...+++...+.+.
T Consensus 123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~----~~~~~--~--~~~~~~~~~~~~~~~-- 191 (282)
T TIGR01809 123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV----QVGVI--T--RLEGDSGGLAIEKAA-- 191 (282)
T ss_pred cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh----hcCcc--e--eccchhhhhhcccCC--
Confidence 56889999997 9999999999999996 79999997554333222111 00111 1 111112333444444
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+|||+...
T Consensus 192 DiVInaTp~ 200 (282)
T TIGR01809 192 EVLVSTVPA 200 (282)
T ss_pred CEEEECCCC
Confidence 999999765
No 442
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.75 E-value=0.093 Score=50.08 Aligned_cols=68 Identities=19% Similarity=0.295 Sum_probs=51.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+.+|+|.|.|- |.||+.+++.|...|.+|++.+|..+.. .++..+ ...+++.+++++.
T Consensus 133 ~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~--------------~~~~~~----~~~~~l~e~l~~a-- 191 (312)
T PRK15469 133 HREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSW--------------PGVQSF----AGREELSAFLSQT-- 191 (312)
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCC--------------CCceee----cccccHHHHHhcC--
Confidence 568999999996 9999999999999999999999843210 111111 1345688899888
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+|+.+...
T Consensus 192 Dvvv~~lPl 200 (312)
T PRK15469 192 RVLINLLPN 200 (312)
T ss_pred CEEEECCCC
Confidence 999987643
No 443
>PRK14851 hypothetical protein; Provisional
Probab=95.72 E-value=0.18 Score=53.09 Aligned_cols=109 Identities=15% Similarity=0.062 Sum_probs=68.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCch-----------------hhh-HHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYY-----------------ETS-LKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~-----------------~~~-~~~~~~~~~~~~~v~~~ 136 (424)
.+.+.+|+|.|. |++|..++..|+..|. +++++|.+.-.. +.. ....-.+.+..-+++.+
T Consensus 40 kL~~~~VlIvG~-GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~~ 118 (679)
T PRK14851 40 RLAEAKVAIPGM-GGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITPF 118 (679)
T ss_pred HHhcCeEEEECc-CHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEEE
Confidence 456788999996 9999999999999996 566666543111 000 01111122334567788
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
...++ .+.+.++++++ |+||.+.-... +..-..+.+.|.+.++. +|+.+
T Consensus 119 ~~~i~-~~n~~~~l~~~--DvVid~~D~~~---------------~~~r~~l~~~c~~~~iP--~i~~g 167 (679)
T PRK14851 119 PAGIN-ADNMDAFLDGV--DVVLDGLDFFQ---------------FEIRRTLFNMAREKGIP--VITAG 167 (679)
T ss_pred ecCCC-hHHHHHHHhCC--CEEEECCCCCc---------------HHHHHHHHHHHHHCCCC--EEEee
Confidence 78886 46678888876 99997753211 11112456678887763 55544
No 444
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=95.71 E-value=0.041 Score=52.51 Aligned_cols=67 Identities=24% Similarity=0.194 Sum_probs=53.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+|.|.|| |.+|+.++.+-.+-|++|++++-+++..... -.-..+.++..|.++++++.+.+ |+|
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~-----------va~~~i~~~~dD~~al~ela~~~--DVi 66 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAPAAQ-----------VADRVIVAAYDDPEALRELAAKC--DVI 66 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCchhh-----------cccceeecCCCCHHHHHHHHhhC--CEE
Confidence 478999998 9999999999999999999999765532211 12245677888999999999988 776
Q ss_pred E
Q 042406 159 M 159 (424)
Q Consensus 159 i 159 (424)
-
T Consensus 67 T 67 (375)
T COG0026 67 T 67 (375)
T ss_pred E
Confidence 4
No 445
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.69 E-value=0.071 Score=51.42 Aligned_cols=69 Identities=19% Similarity=0.136 Sum_probs=49.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..+.||+|.|.|- |-||+.+++.|...|.+|++.+|+.... . .. ..++. ..++.+++++.
T Consensus 146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~------~-~~---~~~~~--------~~~l~ell~~a- 205 (333)
T PRK13243 146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE------A-EK---ELGAE--------YRPLEELLRES- 205 (333)
T ss_pred cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh------h-HH---HcCCE--------ecCHHHHHhhC-
Confidence 4689999999997 9999999999999999999999854311 0 00 01111 12466778877
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
|+|+.+.-.
T Consensus 206 -DiV~l~lP~ 214 (333)
T PRK13243 206 -DFVSLHVPL 214 (333)
T ss_pred -CEEEEeCCC
Confidence 999887643
No 446
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=95.65 E-value=0.12 Score=49.47 Aligned_cols=74 Identities=22% Similarity=0.254 Sum_probs=51.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
-.|++|+|+|.. ++|-..++.+...|++|++++|+.++.+..++ + ....++ |-+|++.++++.+. +|
T Consensus 165 ~pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~------l--GAd~~i--~~~~~~~~~~~~~~--~d 231 (339)
T COG1064 165 KPGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK------L--GADHVI--NSSDSDALEAVKEI--AD 231 (339)
T ss_pred CCCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH------h--CCcEEE--EcCCchhhHHhHhh--Cc
Confidence 358899999995 99999998888899999999997654322211 1 122333 32366666655554 59
Q ss_pred EEEEccc
Q 042406 157 HVMHLAA 163 (424)
Q Consensus 157 ~vi~~Ag 163 (424)
++|.+++
T Consensus 232 ~ii~tv~ 238 (339)
T COG1064 232 AIIDTVG 238 (339)
T ss_pred EEEECCC
Confidence 9999987
No 447
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=95.65 E-value=0.11 Score=49.84 Aligned_cols=36 Identities=44% Similarity=0.537 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
.+.+|+|+||+|.+|..+++.+...|.+|++++++.
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~ 178 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSD 178 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 578899999999999999999999999999888754
No 448
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=95.65 E-value=0.023 Score=54.91 Aligned_cols=28 Identities=29% Similarity=0.393 Sum_probs=25.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDG 105 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~ 105 (424)
..++|.|.||||++|..|++.|.+++|.
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~~~~hP 33 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLTDRDFP 33 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHHhCCCC
Confidence 4568999999999999999999998873
No 449
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.64 E-value=0.046 Score=47.73 Aligned_cols=79 Identities=14% Similarity=0.118 Sum_probs=52.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-HHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-KSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~v~~~~~~~~ 154 (424)
.++||+|+|.|-+.-+|+-|+..|+++|+.|++++.+....-.. ......-.....| ...+.+.+++.
T Consensus 59 ~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~~~~----------~~~~~hs~t~~~~~~~~l~~~~~~A- 127 (197)
T cd01079 59 RLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQVFTR----------GESIRHEKHHVTDEEAMTLDCLSQS- 127 (197)
T ss_pred CCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCccccccc----------ccccccccccccchhhHHHHHhhhC-
Confidence 58999999999999999999999999999999997532111000 0000000111123 22466777877
Q ss_pred ccEEEEcccccC
Q 042406 155 FTHVMHLAAQAG 166 (424)
Q Consensus 155 ~d~vi~~Ag~~~ 166 (424)
|+||-..|...
T Consensus 128 -DIVIsAvG~~~ 138 (197)
T cd01079 128 -DVVITGVPSPN 138 (197)
T ss_pred -CEEEEccCCCC
Confidence 99999888644
No 450
>cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1.
Probab=95.63 E-value=0.17 Score=47.37 Aligned_cols=110 Identities=17% Similarity=0.163 Sum_probs=67.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchh--------------hhH----HHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYE--------------TSL----KKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~--------------~~~----~~~~~~~~~~~~v~~~ 136 (424)
.+...+|||.|. |++|.++++.|+..|. +|+++|...-... ..+ .+...+.+..-+++.+
T Consensus 16 kL~~s~VLIvG~-gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eLNp~V~V~~~ 94 (286)
T cd01491 16 KLQKSNVLISGL-GGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAELNPYVPVTVS 94 (286)
T ss_pred HHhcCcEEEEcC-CHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHHCCCCEEEEE
Confidence 356678999997 9999999999999996 6888876531110 000 1111122233445555
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
..++. .+.+.+. |+||.+... .+. -..+-++|++.+. .||...+.+.+|.
T Consensus 95 ~~~~~-----~~~l~~f--dvVV~~~~~---------~~~--------~~~in~~c~~~~i--pfI~a~~~G~~G~ 144 (286)
T cd01491 95 TGPLT-----TDELLKF--QVVVLTDAS---------LED--------QLKINEFCHSPGI--KFISADTRGLFGS 144 (286)
T ss_pred eccCC-----HHHHhcC--CEEEEecCC---------HHH--------HHHHHHHHHHcCC--EEEEEeccccEEE
Confidence 54432 2455544 888876431 111 2334567888775 6999998888774
No 451
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.63 E-value=0.038 Score=52.18 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=33.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhh
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET 118 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 118 (424)
++|.|.|+ |.+|..++..|++.|++|++++++.+..+.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~ 39 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLES 39 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHH
Confidence 57999998 999999999999999999999998765444
No 452
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.61 E-value=0.064 Score=51.20 Aligned_cols=35 Identities=23% Similarity=0.202 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
++|+|.|.|+ |-+|..++..|.+.|++|++++|+.
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~ 37 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRS 37 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4678999986 9999999999999999999999853
No 453
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.61 E-value=0.029 Score=56.17 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=32.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN 114 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~ 114 (424)
|+|.|.||+|.+|..+++.|.+.|++|++++|+.+
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~ 35 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPK 35 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence 57999999999999999999999999999998643
No 454
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.60 E-value=0.039 Score=54.96 Aligned_cols=73 Identities=22% Similarity=0.226 Sum_probs=50.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
...+++|+|.|+ |.+|..+++.|.+.| .+|++++|+.++..... ... +...+ +.+.+.+.+.+.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la-----~~~---g~~~i-----~~~~l~~~l~~a- 241 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLA-----KEL---GGEAV-----KFEDLEEYLAEA- 241 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-----HHc---CCeEe-----eHHHHHHHHhhC-
Confidence 367899999997 999999999999999 78999999643221111 111 11122 234566777766
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
|+||.+.+.
T Consensus 242 -DvVi~aT~s 250 (417)
T TIGR01035 242 -DIVISSTGA 250 (417)
T ss_pred -CEEEECCCC
Confidence 999998764
No 455
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=95.60 E-value=0.059 Score=45.71 Aligned_cols=71 Identities=20% Similarity=0.167 Sum_probs=44.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+.||+++|+|- |.+|+-+|+.|...|.+|++.+.++-.. ... ...+.++. .+++++...
T Consensus 20 ~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~a------lqA---~~dGf~v~--------~~~~a~~~a-- 79 (162)
T PF00670_consen 20 MLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRA------LQA---AMDGFEVM--------TLEEALRDA-- 79 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHH------HHH---HHTT-EEE---------HHHHTTT---
T ss_pred eeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHH------HHh---hhcCcEec--------CHHHHHhhC--
Confidence 478999999996 9999999999999999999999843211 111 11333333 255677766
Q ss_pred cEEEEcccccC
Q 042406 156 THVMHLAAQAG 166 (424)
Q Consensus 156 d~vi~~Ag~~~ 166 (424)
|++|.+.|..+
T Consensus 80 di~vtaTG~~~ 90 (162)
T PF00670_consen 80 DIFVTATGNKD 90 (162)
T ss_dssp SEEEE-SSSSS
T ss_pred CEEEECCCCcc
Confidence 99998877643
No 456
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.58 E-value=0.068 Score=50.24 Aligned_cols=41 Identities=27% Similarity=0.211 Sum_probs=34.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhh
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYET 118 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~ 118 (424)
.++|+++|.|+ |+.|++++-.|++.|. +|++++|+.++.+.
T Consensus 125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~ 166 (283)
T PRK14027 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQA 166 (283)
T ss_pred cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHH
Confidence 56789999998 9999999999999996 79999997654433
No 457
>PLN02928 oxidoreductase family protein
Probab=95.58 E-value=0.057 Score=52.39 Aligned_cols=82 Identities=13% Similarity=0.058 Sum_probs=53.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..+.||++.|.|- |-||+.+++.|...|.+|++.+|+...... .... .....+..+........++++++.+.
T Consensus 155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~~L~ell~~a- 227 (347)
T PLN02928 155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPE----DGLL-IPNGDVDDLVDEKGGHEDIYEFAGEA- 227 (347)
T ss_pred cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhh----hhhc-cccccccccccccCcccCHHHHHhhC-
Confidence 3588999999997 999999999999999999999985321000 0000 00001111100111445788899988
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
|+|+.+...
T Consensus 228 -DiVvl~lPl 236 (347)
T PLN02928 228 -DIVVLCCTL 236 (347)
T ss_pred -CEEEECCCC
Confidence 999988754
No 458
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=95.55 E-value=0.04 Score=54.22 Aligned_cols=71 Identities=17% Similarity=0.228 Sum_probs=54.7
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVMH 160 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi~ 160 (424)
+|+|.|+ |.+|..+++.+.+.|++|++++.+.+.... . -.-.++..|..|.+.+.++++..++|.|+-
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~~~~~-----~------~ad~~~~~~~~d~~~l~~~~~~~~id~v~~ 68 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYANAPAM-----Q------VAHRSYVINMLDGDALRAVIEREKPDYIVP 68 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchh-----h------hCceEEEcCCCCHHHHHHHHHHhCCCEEEe
Confidence 4899996 999999999999999999999986532111 0 011456678999999999999777899986
Q ss_pred ccc
Q 042406 161 LAA 163 (424)
Q Consensus 161 ~Ag 163 (424)
...
T Consensus 69 ~~e 71 (380)
T TIGR01142 69 EIE 71 (380)
T ss_pred ccC
Confidence 543
No 459
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=95.55 E-value=0.1 Score=48.91 Aligned_cols=76 Identities=21% Similarity=0.214 Sum_probs=45.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-HHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDG-VLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-KSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~v~~~~~~~~~ 155 (424)
.+.+|+|.|+ |.||..+++.+...|.+ |++++++.++.+ . ...+ +... ..|..+ .+.+.+......+
T Consensus 120 ~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~-----~-a~~~---Ga~~-~i~~~~~~~~~~~~~~~~g~ 188 (280)
T TIGR03366 120 KGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRE-----L-ALSF---GATA-LAEPEVLAERQGGLQNGRGV 188 (280)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-----H-HHHc---CCcE-ecCchhhHHHHHHHhCCCCC
Confidence 5778999986 89999999988889986 777766433211 1 1111 1211 112222 2333444333357
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|++|.+.|.
T Consensus 189 d~vid~~G~ 197 (280)
T TIGR03366 189 DVALEFSGA 197 (280)
T ss_pred CEEEECCCC
Confidence 999999874
No 460
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.53 E-value=0.039 Score=51.42 Aligned_cols=58 Identities=26% Similarity=0.293 Sum_probs=47.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...||+++|+|-+..+|+-|+..|+++|+.|++..+.. ..+.+..++.
T Consensus 156 ~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T------------------------------~~l~~~~~~A-- 203 (285)
T PRK10792 156 DTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT------------------------------KNLRHHVRNA-- 203 (285)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC------------------------------CCHHHHHhhC--
Confidence 57899999999999999999999999999999997621 1255666666
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||..+|..
T Consensus 204 DIvi~avG~p 213 (285)
T PRK10792 204 DLLVVAVGKP 213 (285)
T ss_pred CEEEEcCCCc
Confidence 9999988763
No 461
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=95.52 E-value=0.042 Score=54.89 Aligned_cols=73 Identities=19% Similarity=0.140 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
..+++|+|.|+ |.+|..+++.|...|. +|++++|+.++.... ....+ . +..+.+.+.+.+.+.
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~l-----a~~~g---~-----~~~~~~~~~~~l~~a-- 243 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEEL-----AEEFG---G-----EAIPLDELPEALAEA-- 243 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH-----HHHcC---C-----cEeeHHHHHHHhccC--
Confidence 67899999997 9999999999999997 799999854322111 11111 1 222335566666665
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||.+.+..
T Consensus 244 DvVI~aT~s~ 253 (423)
T PRK00045 244 DIVISSTGAP 253 (423)
T ss_pred CEEEECCCCC
Confidence 9999987653
No 462
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=95.51 E-value=0.058 Score=48.02 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=33.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNF 112 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~ 112 (424)
.+++|+|+|.|| |-+|...++.|++.|++|+++++.
T Consensus 7 ~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~ 42 (202)
T PRK06718 7 DLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE 42 (202)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence 468899999998 999999999999999999999763
No 463
>KOG2013 consensus SMT3/SUMO-activating complex, catalytic component UBA2 [Posttranslational modification, protein turnover, chaperones]
Probab=95.46 E-value=0.041 Score=53.82 Aligned_cols=35 Identities=26% Similarity=0.256 Sum_probs=29.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFN 113 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~ 113 (424)
.+-+|||+|| |+||-.|.+.|+-.|. +|.++|-..
T Consensus 11 ~~~riLvVGa-GGIGCELLKnLal~gf~~IhiIDlDT 46 (603)
T KOG2013|consen 11 KSGRILVVGA-GGIGCELLKNLALTGFEEIHIIDLDT 46 (603)
T ss_pred ccCeEEEEec-CcccHHHHHHHHHhcCCeeEEEeccc
Confidence 4567999998 9999999999999996 688887644
No 464
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=95.45 E-value=0.048 Score=52.08 Aligned_cols=72 Identities=22% Similarity=0.186 Sum_probs=49.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
..+++|+|.|+ |.+|..+++.|...| .+|++++|+.++..... ... +.. ..+.+.+.+.+.+.
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la-----~~~---g~~-----~~~~~~~~~~l~~a-- 239 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELA-----KEL---GGN-----AVPLDELLELLNEA-- 239 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-----HHc---CCe-----EEeHHHHHHHHhcC--
Confidence 57899999997 999999999999876 68999998543221111 111 112 22334566667766
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||.+.+.
T Consensus 240 DvVi~at~~ 248 (311)
T cd05213 240 DVVISATGA 248 (311)
T ss_pred CEEEECCCC
Confidence 999999875
No 465
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.39 E-value=0.1 Score=49.16 Aligned_cols=39 Identities=28% Similarity=0.280 Sum_probs=33.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhh
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET 118 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 118 (424)
.++|.|.|+ |.+|..++..|++.|++|++++++.+..+.
T Consensus 3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~~~l~~ 41 (287)
T PRK08293 3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISDEALEK 41 (287)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCHHHHHH
Confidence 367999987 999999999999999999999997765443
No 466
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.37 E-value=0.059 Score=50.70 Aligned_cols=35 Identities=23% Similarity=0.286 Sum_probs=33.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEe
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLD 110 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~ 110 (424)
...||+|+|.|-++.+|+.++..|+++|+.|+++.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~ 189 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAH 189 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEEC
Confidence 47899999999999999999999999999999995
No 467
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.37 E-value=0.051 Score=50.80 Aligned_cols=43 Identities=26% Similarity=0.329 Sum_probs=36.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhh
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETS 119 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~ 119 (424)
..++++++|.|| |+.+++++..|++.| .+|+++.|+.++.++.
T Consensus 123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~L 166 (283)
T COG0169 123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEEL 166 (283)
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 446899999998 999999999999999 5899999977654443
No 468
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=95.36 E-value=0.053 Score=51.12 Aligned_cols=41 Identities=22% Similarity=0.229 Sum_probs=35.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhH
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSL 120 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 120 (424)
.++|.|.|+ |.+|..++..|+..|++|++.|++.+..+...
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~ 45 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGR 45 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 357999997 99999999999999999999999877655433
No 469
>PRK07574 formate dehydrogenase; Provisional
Probab=95.34 E-value=0.095 Score=51.39 Aligned_cols=71 Identities=23% Similarity=0.169 Sum_probs=50.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..+.||+|.|.|. |-||+.+++.|...|.+|++.+|...... ... ..++. -..++++++++.
T Consensus 188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~-----~~~----~~g~~-------~~~~l~ell~~a- 249 (385)
T PRK07574 188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEE-----VEQ----ELGLT-------YHVSFDSLVSVC- 249 (385)
T ss_pred eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchh-----hHh----hcCce-------ecCCHHHHhhcC-
Confidence 4688999999997 99999999999999999999998542110 000 01221 123477888877
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
|+|+.+...
T Consensus 250 -DvV~l~lPl 258 (385)
T PRK07574 250 -DVVTIHCPL 258 (385)
T ss_pred -CEEEEcCCC
Confidence 999887643
No 470
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=95.29 E-value=0.15 Score=49.21 Aligned_cols=76 Identities=21% Similarity=0.198 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC--HHHHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDG-VLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND--KSLLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~v~~~~~~~~ 154 (424)
.+.+|+|+|+ |.+|..+++.+...|.+ |++++++.++.+. . ..+ ++.. ..|..+ .+.+.+...+.+
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~-----~-~~~---ga~~-~i~~~~~~~~~~~~~~~~~~ 231 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLEL-----A-KAL---GADF-VINSGQDDVQEIRELTSGAG 231 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-----H-HHh---CCCE-EEcCCcchHHHHHHHhCCCC
Confidence 4789999986 99999999999999998 9988875432111 1 111 1111 123333 344545544446
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||.+.|.
T Consensus 232 ~d~vid~~g~ 241 (339)
T cd08239 232 ADVAIECSGN 241 (339)
T ss_pred CCEEEECCCC
Confidence 7999999874
No 471
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=95.28 E-value=0.22 Score=45.72 Aligned_cols=93 Identities=13% Similarity=-0.004 Sum_probs=69.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+++|||.||| .=|+.|++.|.+.|++|++..-..-.. .....+.++.+-+.|.+.+.+++++.+++.|
T Consensus 2 ~~~IlvlgGT-~egr~la~~L~~~g~~v~~Svat~~g~-----------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~V 69 (248)
T PRK08057 2 MPRILLLGGT-SEARALARALAAAGVDIVLSLAGRTGG-----------PADLPGPVRVGGFGGAEGLAAYLREEGIDLV 69 (248)
T ss_pred CceEEEEech-HHHHHHHHHHHhCCCeEEEEEccCCCC-----------cccCCceEEECCCCCHHHHHHHHHHCCCCEE
Confidence 4679999996 469999999999999887765432110 2234778888898899999999999899999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCC
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~ 198 (424)
|...=+ ++ ..-+.++.++|++.+..
T Consensus 70 IDATHP----fA-----------~~is~~a~~ac~~~~ip 94 (248)
T PRK08057 70 IDATHP----YA-----------AQISANAAAACRALGIP 94 (248)
T ss_pred EECCCc----cH-----------HHHHHHHHHHHHHhCCc
Confidence 986422 11 12357889999999875
No 472
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=95.28 E-value=0.056 Score=53.56 Aligned_cols=38 Identities=26% Similarity=0.239 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN 114 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~ 114 (424)
...|++|+|+|. |.||+.+++.|...|.+|++.+++..
T Consensus 209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ 246 (425)
T PRK05476 209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPI 246 (425)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCch
Confidence 358999999997 99999999999999999999998654
No 473
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.24 E-value=0.075 Score=49.57 Aligned_cols=58 Identities=17% Similarity=0.192 Sum_probs=46.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...||+|+|.|.+..+|+.++..|+++|+.|+++.... ..+.+..++.
T Consensus 154 ~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t------------------------------~~l~~~~~~A-- 201 (285)
T PRK14191 154 EIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT------------------------------KDLSFYTQNA-- 201 (285)
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc------------------------------HHHHHHHHhC--
Confidence 56899999999999999999999999999999875311 1244566666
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||-.+|..
T Consensus 202 DIvV~AvG~p 211 (285)
T PRK14191 202 DIVCVGVGKP 211 (285)
T ss_pred CEEEEecCCC
Confidence 9999888753
No 474
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.21 E-value=0.052 Score=50.65 Aligned_cols=57 Identities=19% Similarity=0.204 Sum_probs=46.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...||+|+|.|.++.+|+.|+..|.++|+.|++..... ..+.+.+++.
T Consensus 155 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t------------------------------~~l~~~~~~A-- 202 (285)
T PRK14189 155 PLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT------------------------------RDLAAHTRQA-- 202 (285)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC------------------------------CCHHHHhhhC--
Confidence 57899999999999999999999999999999875411 1244566666
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||-.+|.
T Consensus 203 DIVV~avG~ 211 (285)
T PRK14189 203 DIVVAAVGK 211 (285)
T ss_pred CEEEEcCCC
Confidence 999988874
No 475
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.21 E-value=0.1 Score=53.13 Aligned_cols=76 Identities=24% Similarity=0.179 Sum_probs=51.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
.++++|+|.|+ |++|..+++.|+++|++|+++++....... .....+...++.++..+-.. ... .+|
T Consensus 14 ~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~----~~~~~l~~~gv~~~~~~~~~------~~~--~~D 80 (480)
T PRK01438 14 WQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHR----ALAAILEALGATVRLGPGPT------LPE--DTD 80 (480)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhH----HHHHHHHHcCCEEEECCCcc------ccC--CCC
Confidence 56789999997 999999999999999999999875432111 11111233467776554322 112 459
Q ss_pred EEEEccccc
Q 042406 157 HVMHLAAQA 165 (424)
Q Consensus 157 ~vi~~Ag~~ 165 (424)
.||...|+.
T Consensus 81 ~Vv~s~Gi~ 89 (480)
T PRK01438 81 LVVTSPGWR 89 (480)
T ss_pred EEEECCCcC
Confidence 999988874
No 476
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=95.20 E-value=0.24 Score=45.50 Aligned_cols=36 Identities=39% Similarity=0.433 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
.++.+|+|+|+++ +|..+++.+...|.+|++++++.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~ 168 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSD 168 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCH
Confidence 3567899999988 99999999999999999998854
No 477
>PRK06436 glycerate dehydrogenase; Provisional
Probab=95.19 E-value=0.073 Score=50.50 Aligned_cols=97 Identities=15% Similarity=0.134 Sum_probs=63.1
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..+.||+|.|.|- |-||+.+++.|...|.+|++.+|+... .++... ..++++++.+.
T Consensus 118 ~~L~gktvgIiG~-G~IG~~vA~~l~afG~~V~~~~r~~~~---------------~~~~~~------~~~l~ell~~a- 174 (303)
T PRK06436 118 KLLYNKSLGILGY-GGIGRRVALLAKAFGMNIYAYTRSYVN---------------DGISSI------YMEPEDIMKKS- 174 (303)
T ss_pred CCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcc---------------cCcccc------cCCHHHHHhhC-
Confidence 4689999999996 999999999888889999999984210 111100 12467788877
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCccc
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVY 210 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vy 210 (424)
|+|+.+....... .. +. ....++.+++ +..||.+|...+.
T Consensus 175 -Div~~~lp~t~~T------~~-----li-~~~~l~~mk~---ga~lIN~sRG~~v 214 (303)
T PRK06436 175 -DFVLISLPLTDET------RG-----MI-NSKMLSLFRK---GLAIINVARADVV 214 (303)
T ss_pred -CEEEECCCCCchh------hc-----Cc-CHHHHhcCCC---CeEEEECCCcccc
Confidence 9999887542210 00 11 1334555554 2378888876664
No 478
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.19 E-value=0.14 Score=53.86 Aligned_cols=73 Identities=23% Similarity=0.225 Sum_probs=54.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
.++|+|.|. |-+|+.+++.|.++|.+++++|.+.+..+. ....+..++.+|.+|++.++++=-+ +.|.|
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~---------~~~~g~~v~~GDat~~~~L~~agi~-~A~~v 468 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIET---------LRKFGMKVFYGDATRMDLLESAGAA-KAEVL 468 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHH---------HHhcCCeEEEEeCCCHHHHHhcCCC-cCCEE
Confidence 467999997 999999999999999999999985542221 1224678999999999987764211 44877
Q ss_pred EEcc
Q 042406 159 MHLA 162 (424)
Q Consensus 159 i~~A 162 (424)
|-+-
T Consensus 469 vv~~ 472 (621)
T PRK03562 469 INAI 472 (621)
T ss_pred EEEe
Confidence 7654
No 479
>cd01490 Ube1_repeat2 Ubiquitin activating enzyme (E1), repeat 2. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the second repeat of Ub-E1.
Probab=95.16 E-value=0.32 Score=48.32 Aligned_cols=109 Identities=14% Similarity=0.163 Sum_probs=63.7
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC------eEEEEeCCCCchhh--------------hH----HHHHhhhhccCCeEEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD------GVLGLDNFNNYYET--------------SL----KKARKGLLERAGVFVI 136 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~------~V~~~~r~~~~~~~--------------~~----~~~~~~~~~~~~v~~~ 136 (424)
+|+|.|+ |+||..+++.|+..|. +++++|.+.-.... .+ .....+....-+++.+
T Consensus 1 kVlvVGa-GGlGcE~lKnLal~Gv~~g~~G~I~IvD~D~Ie~SNLnRQfLf~~~dIGk~Ka~vAa~~l~~lNp~v~I~a~ 79 (435)
T cd01490 1 KVFLVGA-GAIGCELLKNFALMGVGTGESGEITVTDMDNIEKSNLNRQFLFRPHDVGKPKSEVAAAAVKAMNPDLKITAL 79 (435)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCcCCCCeEEEECCCCccccccCcCccCChhHcCcHHHHHHHHHHHHHCCCCEEEEE
Confidence 4899996 9999999999999997 78888875421110 00 0011112233455666
Q ss_pred EccCCCH-HH-H-HHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 137 DADINDK-SL-L-DKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 137 ~~Dl~d~-~~-v-~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
...+... +. + .+++++. |+||++.- |+..-..+-+.|...+. -+|..++.+.+|
T Consensus 80 ~~~v~~~~~~~~~~~f~~~~--DvVi~alD-----------------n~~aR~~vn~~C~~~~i--Pli~~gt~G~~G 136 (435)
T cd01490 80 QNRVGPETEHIFNDEFWEKL--DGVANALD-----------------NVDARMYVDRRCVYYRK--PLLESGTLGTKG 136 (435)
T ss_pred ecccChhhhhhhhHHHhcCC--CEEEECCC-----------------CHHHHHHHHHHHHHhCC--CEEEEeccccee
Confidence 6555421 11 1 2445544 88887642 22233455667777765 477777666554
No 480
>cd01488 Uba3_RUB Ubiquitin activating enzyme (E1) subunit UBA3. UBA3 is part of the heterodimeric activating enzyme (E1), specific for the Rub family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins. consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin(-like) by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by Rub family of ubiquitin-like proteins (Ublps) activates SCF ubiquitin ligases and is involved in cell cycle control, signaling and embryogenesis. UBA3 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.
Probab=95.16 E-value=0.28 Score=46.15 Aligned_cols=77 Identities=17% Similarity=0.133 Sum_probs=49.1
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchh----------hh----HHH----HHhhhhccCCeEEEEccCC
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYE----------TS----LKK----ARKGLLERAGVFVIDADIN 141 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~----------~~----~~~----~~~~~~~~~~v~~~~~Dl~ 141 (424)
+|+|.|+ |++|.++++.|+..|. +++++|.+.-... .. +.+ .-.+....-+++.+..++.
T Consensus 1 kVlVVGa-GGlG~eilknLal~Gvg~I~IvD~D~Ve~SNLnRQfLf~~~dIGk~KAevaa~~l~~~np~v~I~~~~~~i~ 79 (291)
T cd01488 1 KILVIGA-GGLGCELLKNLALSGFRNIHVIDMDTIDVSNLNRQFLFREKDIGKPKAEVAAKFVNDRVPGVNVTPHFGKIQ 79 (291)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecccccCcCcccChHHcchHHHHHHHHHHHHHCCCCEEEEEecccC
Confidence 4899996 9999999999999996 6777775432110 00 000 1111223346777778887
Q ss_pred CHHHHHHHhhccCccEEEEcc
Q 042406 142 DKSLLDKIFNVVAFTHVMHLA 162 (424)
Q Consensus 142 d~~~v~~~~~~~~~d~vi~~A 162 (424)
+.+ .+++++. |+||.+.
T Consensus 80 ~~~--~~f~~~f--dvVi~al 96 (291)
T cd01488 80 DKD--EEFYRQF--NIIICGL 96 (291)
T ss_pred chh--HHHhcCC--CEEEECC
Confidence 643 4667755 9999864
No 481
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.16 E-value=0.058 Score=50.32 Aligned_cols=58 Identities=17% Similarity=0.177 Sum_probs=47.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...||+|+|+|.+..+|+-|+..|.++|+.|++...... .+.+..++.
T Consensus 161 ~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~------------------------------~l~~~~~~A-- 208 (287)
T PRK14176 161 DIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD------------------------------DLKKYTLDA-- 208 (287)
T ss_pred CCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC------------------------------CHHHHHhhC--
Confidence 568999999999999999999999999999999874211 134555656
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||..+|..
T Consensus 209 DIvv~AvG~p 218 (287)
T PRK14176 209 DILVVATGVK 218 (287)
T ss_pred CEEEEccCCc
Confidence 9999988864
No 482
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=95.14 E-value=0.16 Score=49.11 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=46.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-Cc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-AF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~~ 155 (424)
.+.+|+|+|+ |.+|...++.+...|. +|++++++.++.+.. ..+ +... ..|..+. .+.+..+.. .+
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a------~~l---Ga~~-vi~~~~~-~~~~~~~~~g~~ 236 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA------REM---GADK-LVNPQND-DLDHYKAEKGYF 236 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH------HHc---CCcE-EecCCcc-cHHHHhccCCCC
Confidence 4778999986 9999999999989998 688888754322111 111 2221 1233332 233333221 47
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|++|.+.|.
T Consensus 237 D~vid~~G~ 245 (343)
T PRK09880 237 DVSFEVSGH 245 (343)
T ss_pred CEEEECCCC
Confidence 999999874
No 483
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.13 E-value=0.076 Score=52.08 Aligned_cols=75 Identities=24% Similarity=0.210 Sum_probs=56.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
+++++++||.|+ |-+|.-++++|.++| .+|+++.|+.++......+. + +++...+.+.+.+.+.
T Consensus 175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~--------~-----~~~~~l~el~~~l~~~- 239 (414)
T COG0373 175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL--------G-----AEAVALEELLEALAEA- 239 (414)
T ss_pred ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh--------C-----CeeecHHHHHHhhhhC-
Confidence 378999999998 999999999999999 68888888554333222111 1 4566677788888877
Q ss_pred ccEEEEcccccC
Q 042406 155 FTHVMHLAAQAG 166 (424)
Q Consensus 155 ~d~vi~~Ag~~~ 166 (424)
|+||-+-|...
T Consensus 240 -DvVissTsa~~ 250 (414)
T COG0373 240 -DVVISSTSAPH 250 (414)
T ss_pred -CEEEEecCCCc
Confidence 99999877543
No 484
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=95.08 E-value=0.082 Score=52.22 Aligned_cols=69 Identities=16% Similarity=0.134 Sum_probs=48.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...|++|+|.|+ |.||..+++.+...|.+|++++++..+..... ..++..+ +. ++++.+.
T Consensus 199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~---------~~G~~~~-----~~---~e~v~~a-- 258 (413)
T cd00401 199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA---------MEGYEVM-----TM---EEAVKEG-- 258 (413)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH---------hcCCEEc-----cH---HHHHcCC--
Confidence 468999999998 89999999999999999999988654322111 1233222 11 2455555
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||.+.|.
T Consensus 259 DVVI~atG~ 267 (413)
T cd00401 259 DIFVTTTGN 267 (413)
T ss_pred CEEEECCCC
Confidence 999998764
No 485
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=95.05 E-value=0.1 Score=50.65 Aligned_cols=36 Identities=33% Similarity=0.395 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
.|.+|+|+||+|.+|..+++.+...|.+|++++++.
T Consensus 158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~ 193 (348)
T PLN03154 158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS 193 (348)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 578999999999999999999999999999887743
No 486
>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed
Probab=95.04 E-value=0.057 Score=54.75 Aligned_cols=38 Identities=18% Similarity=0.285 Sum_probs=33.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN 114 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~ 114 (424)
..++|+++|+|+ |++|+.++..|++.|++|++.+|+.+
T Consensus 329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~ 366 (477)
T PRK09310 329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKA 366 (477)
T ss_pred CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 457889999996 89999999999999999999988643
No 487
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=95.03 E-value=0.35 Score=46.21 Aligned_cols=37 Identities=38% Similarity=0.354 Sum_probs=32.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
.++.+|+|.|++|.+|..+++.+.+.|.+|++++++.
T Consensus 138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~ 174 (329)
T cd08250 138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSD 174 (329)
T ss_pred CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcH
Confidence 3578899999999999999999999999999988754
No 488
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=95.02 E-value=0.098 Score=49.45 Aligned_cols=77 Identities=19% Similarity=0.263 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHH---HHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSL---LDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---v~~~~~~~~ 154 (424)
.+++|+|+|++|.+|..+++.+...|..|++++++.+..+. .. . . ++. ...|..+.+. +.+...+..
T Consensus 139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~----~~-~-~---g~~-~~~~~~~~~~~~~~~~~~~~~~ 208 (323)
T cd05276 139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEA----CR-A-L---GAD-VAINYRTEDFAEEVKEATGGRG 208 (323)
T ss_pred CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHH----HH-H-c---CCC-EEEeCCchhHHHHHHHHhCCCC
Confidence 56789999999999999999999999999999885432211 11 1 1 111 1233333332 333333335
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|.+++++|.
T Consensus 209 ~d~vi~~~g~ 218 (323)
T cd05276 209 VDVILDMVGG 218 (323)
T ss_pred eEEEEECCch
Confidence 7999999873
No 489
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=94.98 E-value=0.13 Score=49.77 Aligned_cols=35 Identities=31% Similarity=0.362 Sum_probs=31.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCC
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFN 113 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~ 113 (424)
+.+|+|+||+|.+|..+++.+...|. +|++++++.
T Consensus 155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~ 190 (345)
T cd08293 155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSD 190 (345)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence 47899999999999999998888998 799988754
No 490
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=94.94 E-value=0.23 Score=47.46 Aligned_cols=37 Identities=38% Similarity=0.327 Sum_probs=32.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN 114 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~ 114 (424)
.+.+|+|.|++|.+|..+++.+...|.+|++++++.+
T Consensus 146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~ 182 (326)
T cd08289 146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKAD 182 (326)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHH
Confidence 3578999999999999999999999999999988653
No 491
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=94.93 E-value=0.12 Score=52.57 Aligned_cols=37 Identities=30% Similarity=0.232 Sum_probs=32.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN 114 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~ 114 (424)
..+.+|+|+|+ |-+|...+..+...|++|+++|++.+
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~ 199 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPE 199 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35789999998 99999999999999999999998553
No 492
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.93 E-value=0.079 Score=50.20 Aligned_cols=26 Identities=38% Similarity=0.395 Sum_probs=23.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD 104 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~ 104 (424)
+++|.|.||||.+|+.+++.|.++..
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f 26 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHF 26 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCC
Confidence 46899999999999999999999864
No 493
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=94.93 E-value=0.28 Score=46.70 Aligned_cols=76 Identities=17% Similarity=0.216 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCe-EEEEccCCC---HHHHHHHhhcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGV-FVIDADIND---KSLLDKIFNVV 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d---~~~v~~~~~~~ 153 (424)
.+.+|+|.||+|.+|..+++.+.+.|..|+++.++.+.... .+ . .++ .++ +..+ .+.+.+...+.
T Consensus 139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~----~~-~----~g~~~~~--~~~~~~~~~~i~~~~~~~ 207 (324)
T cd08292 139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAE----LR-A----LGIGPVV--STEQPGWQDKVREAAGGA 207 (324)
T ss_pred CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHH----HH-h----cCCCEEE--cCCCchHHHHHHHHhCCC
Confidence 56789999999999999999999999999988775432111 11 1 122 222 2222 23344455444
Q ss_pred CccEEEEcccc
Q 042406 154 AFTHVMHLAAQ 164 (424)
Q Consensus 154 ~~d~vi~~Ag~ 164 (424)
++|+|+++.|.
T Consensus 208 ~~d~v~d~~g~ 218 (324)
T cd08292 208 PISVALDSVGG 218 (324)
T ss_pred CCcEEEECCCC
Confidence 67999998873
No 494
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.92 E-value=0.062 Score=50.11 Aligned_cols=35 Identities=20% Similarity=0.254 Sum_probs=32.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEe
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLD 110 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~ 110 (424)
...||+|.|.|.+|.+|+.++..|+++|+.|+++.
T Consensus 155 ~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~ 189 (284)
T PRK14179 155 ELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTH 189 (284)
T ss_pred CCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEEC
Confidence 47899999999999999999999999999999983
No 495
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=94.87 E-value=0.099 Score=50.27 Aligned_cols=35 Identities=26% Similarity=0.380 Sum_probs=28.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEeC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD---GVLGLDN 111 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~---~V~~~~r 111 (424)
.++++|.|.||||++|..|++.|.++.| ++..+..
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS 39 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQFPVGELYALAS 39 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence 3567899999999999999999999654 5555543
No 496
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.86 E-value=0.1 Score=48.73 Aligned_cols=58 Identities=17% Similarity=0.183 Sum_probs=47.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...||+|+|.|.|..+|+-|+..|+++|+.|++..... ..+.+..++.
T Consensus 155 ~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t------------------------------~~l~~~~~~A-- 202 (284)
T PRK14190 155 DISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT------------------------------KNLAELTKQA-- 202 (284)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc------------------------------hhHHHHHHhC--
Confidence 57899999999999999999999999999999875411 1355666766
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||-.+|..
T Consensus 203 DIvI~AvG~p 212 (284)
T PRK14190 203 DILIVAVGKP 212 (284)
T ss_pred CEEEEecCCC
Confidence 9999888753
No 497
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=94.86 E-value=0.33 Score=46.41 Aligned_cols=36 Identities=42% Similarity=0.499 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
.+.+|+|.|++|.+|..+++.+.+.|.+|++++++.
T Consensus 145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~ 180 (329)
T cd05288 145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSD 180 (329)
T ss_pred CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCH
Confidence 467899999999999999999999999999998744
No 498
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=94.83 E-value=0.14 Score=49.57 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=27.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeC
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDN 111 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r 111 (424)
++|.|+|++|++|++|++.|.+++ .+|+.+..
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~ 33 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA 33 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence 479999999999999999998877 58777744
No 499
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.82 E-value=0.065 Score=43.73 Aligned_cols=88 Identities=19% Similarity=0.211 Sum_probs=44.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEe-CCCCchhhhHHHHHhh-----hhccCCeEEEEccCCCHHHHHHHh
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLD-NFNNYYETSLKKARKG-----LLERAGVFVIDADINDKSLLDKIF 150 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~-----~~~~~~v~~~~~Dl~d~~~v~~~~ 150 (424)
...++|-|.|+ |-+|.+|++.|.+.|+.|..+. |+....+......... .......+.+-.-+.|. .+.++.
T Consensus 8 ~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va 85 (127)
T PF10727_consen 8 AARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVA 85 (127)
T ss_dssp ----EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHH
T ss_pred CCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHH
Confidence 45678999998 9999999999999999998874 4322211111110000 00113344555555553 344333
Q ss_pred hcc------Cc-cEEEEcccccC
Q 042406 151 NVV------AF-THVMHLAAQAG 166 (424)
Q Consensus 151 ~~~------~~-d~vi~~Ag~~~ 166 (424)
++. ++ .+|+||.|..+
T Consensus 86 ~~La~~~~~~~g~iVvHtSGa~~ 108 (127)
T PF10727_consen 86 EQLAQYGAWRPGQIVVHTSGALG 108 (127)
T ss_dssp HHHHCC--S-TT-EEEES-SS--
T ss_pred HHHHHhccCCCCcEEEECCCCCh
Confidence 322 22 59999999755
No 500
>PRK10537 voltage-gated potassium channel; Provisional
Probab=94.82 E-value=0.3 Score=48.09 Aligned_cols=71 Identities=17% Similarity=0.166 Sum_probs=51.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
..+++|+|. |-+|+.++++|.++|.+|++++.+.. +.....+..++.+|.+|.+.++++=-+ +.+.|
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~-----------~~~~~~g~~vI~GD~td~e~L~~AgI~-~A~aV 306 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL-----------EHRLPDDADLIPGDSSDSAVLKKAGAA-RARAI 306 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh-----------hhhccCCCcEEEeCCCCHHHHHhcCcc-cCCEE
Confidence 457999997 88999999999999999999985310 111224678999999999888765322 33777
Q ss_pred EEcc
Q 042406 159 MHLA 162 (424)
Q Consensus 159 i~~A 162 (424)
+-+.
T Consensus 307 I~~t 310 (393)
T PRK10537 307 LALR 310 (393)
T ss_pred EEcC
Confidence 7543
Done!