Query 042406
Match_columns 424
No_of_seqs 248 out of 2544
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 09:54:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042406.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042406hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ruf_A WBGU; rossmann fold, UD 100.0 2.5E-48 8.7E-53 377.0 37.3 319 76-412 22-350 (351)
2 4egb_A DTDP-glucose 4,6-dehydr 100.0 2.6E-48 9E-53 376.1 34.8 318 74-412 19-339 (346)
3 3enk_A UDP-glucose 4-epimerase 100.0 2.4E-47 8.2E-52 368.5 36.9 320 78-412 4-338 (341)
4 3m2p_A UDP-N-acetylglucosamine 100.0 9.8E-47 3.4E-51 359.8 32.8 298 79-413 2-299 (311)
5 1sb8_A WBPP; epimerase, 4-epim 100.0 4.5E-46 1.5E-50 361.4 37.8 316 77-411 25-351 (352)
6 2pk3_A GDP-6-deoxy-D-LYXO-4-he 100.0 4.4E-46 1.5E-50 356.7 35.1 302 77-409 10-320 (321)
7 3ko8_A NAD-dependent epimerase 100.0 1.6E-46 5.3E-51 358.4 31.4 304 80-411 1-310 (312)
8 2hun_A 336AA long hypothetical 100.0 7.4E-46 2.5E-50 357.4 35.8 309 78-410 2-314 (336)
9 3slg_A PBGP3 protein; structur 100.0 5.8E-47 2E-51 370.4 28.0 314 74-413 19-363 (372)
10 3ehe_A UDP-glucose 4-epimerase 100.0 3.5E-46 1.2E-50 356.3 31.2 303 79-414 1-306 (313)
11 2c20_A UDP-glucose 4-epimerase 100.0 2.6E-45 9E-50 352.6 37.0 313 79-413 1-327 (330)
12 4b8w_A GDP-L-fucose synthase; 100.0 4E-46 1.4E-50 355.6 30.6 300 77-413 4-317 (319)
13 4id9_A Short-chain dehydrogena 100.0 2.6E-46 8.9E-51 362.2 29.4 304 70-413 10-343 (347)
14 1rkx_A CDP-glucose-4,6-dehydra 100.0 1.8E-45 6.2E-50 357.8 35.4 320 77-413 7-339 (357)
15 1rpn_A GDP-mannose 4,6-dehydra 100.0 2.8E-45 9.4E-50 353.2 35.9 316 77-413 12-334 (335)
16 1r6d_A TDP-glucose-4,6-dehydra 100.0 4E-45 1.4E-49 352.5 36.4 307 80-410 1-314 (337)
17 2p5y_A UDP-glucose 4-epimerase 100.0 1.8E-45 6.2E-50 351.0 32.4 302 80-409 1-309 (311)
18 1orr_A CDP-tyvelose-2-epimeras 100.0 3.7E-45 1.3E-49 353.8 34.9 314 79-412 1-341 (347)
19 1ek6_A UDP-galactose 4-epimera 100.0 1E-44 3.5E-49 351.0 37.5 318 79-412 2-342 (348)
20 1oc2_A DTDP-glucose 4,6-dehydr 100.0 1E-44 3.5E-49 351.1 36.4 306 79-410 4-325 (348)
21 3sxp_A ADP-L-glycero-D-mannohe 100.0 8.5E-46 2.9E-50 360.9 28.6 311 75-413 6-327 (362)
22 1gy8_A UDP-galactose 4-epimera 100.0 1.1E-44 3.8E-49 357.2 36.8 324 79-412 2-380 (397)
23 1udb_A Epimerase, UDP-galactos 100.0 3.5E-44 1.2E-48 346.0 38.0 319 80-412 1-334 (338)
24 2q1s_A Putative nucleotide sug 100.0 3.7E-45 1.3E-49 358.3 30.6 308 76-411 29-358 (377)
25 1i24_A Sulfolipid biosynthesis 100.0 3.3E-44 1.1E-48 354.6 36.5 321 77-413 9-380 (404)
26 2bll_A Protein YFBG; decarboxy 100.0 4E-44 1.4E-48 346.3 35.0 309 80-413 1-340 (345)
27 1kew_A RMLB;, DTDP-D-glucose 4 100.0 3E-44 1E-48 349.5 33.8 309 80-410 1-337 (361)
28 2z1m_A GDP-D-mannose dehydrata 100.0 7.6E-44 2.6E-48 344.2 36.1 315 78-413 2-340 (345)
29 2c5a_A GDP-mannose-3', 5'-epim 100.0 7.2E-44 2.5E-48 349.4 35.2 305 77-412 27-343 (379)
30 1db3_A GDP-mannose 4,6-dehydra 100.0 7.4E-44 2.5E-48 348.2 34.0 319 79-415 1-357 (372)
31 1t2a_A GDP-mannose 4,6 dehydra 100.0 1.3E-43 4.6E-48 346.9 34.7 318 80-415 25-371 (375)
32 3vps_A TUNA, NAD-dependent epi 100.0 1.3E-44 4.4E-49 346.1 26.3 302 77-413 5-308 (321)
33 1e6u_A GDP-fucose synthetase; 100.0 5.4E-44 1.8E-48 342.1 30.6 303 78-413 2-318 (321)
34 2b69_A UDP-glucuronate decarbo 100.0 2.8E-43 9.5E-48 340.6 34.5 307 76-413 24-336 (343)
35 3sc6_A DTDP-4-dehydrorhamnose 100.0 3.1E-43 1.1E-47 331.6 28.1 278 80-410 6-287 (287)
36 1n7h_A GDP-D-mannose-4,6-dehyd 100.0 1.4E-42 4.7E-47 340.5 31.9 315 80-412 29-356 (381)
37 2pzm_A Putative nucleotide sug 100.0 8.2E-43 2.8E-47 335.5 25.7 298 72-412 13-318 (330)
38 2x4g_A Nucleoside-diphosphate- 100.0 3.4E-42 1.2E-46 332.4 30.1 292 78-410 12-337 (342)
39 2yy7_A L-threonine dehydrogena 100.0 1.6E-42 5.6E-47 330.4 27.2 301 79-408 2-312 (312)
40 1n2s_A DTDP-4-, DTDP-glucose o 100.0 2.6E-42 8.8E-47 327.1 28.4 286 80-410 1-296 (299)
41 2x6t_A ADP-L-glycero-D-manno-h 100.0 2.6E-42 8.8E-47 335.6 28.8 301 76-410 43-356 (357)
42 2q1w_A Putative nucleotide sug 100.0 5.2E-42 1.8E-46 330.3 29.1 295 74-411 16-319 (333)
43 1vl0_A DTDP-4-dehydrorhamnose 100.0 8.1E-42 2.8E-46 322.7 29.4 278 78-409 11-292 (292)
44 1eq2_A ADP-L-glycero-D-mannohe 100.0 4.4E-42 1.5E-46 327.0 26.0 296 81-410 1-309 (310)
45 3gpi_A NAD-dependent epimerase 100.0 2.6E-42 8.8E-47 325.3 21.7 280 78-412 2-282 (286)
46 1z7e_A Protein aRNA; rossmann 100.0 6.2E-41 2.1E-45 351.0 34.0 311 77-412 313-654 (660)
47 1z45_A GAL10 bifunctional prot 100.0 7.1E-41 2.4E-45 353.1 33.5 326 75-412 7-353 (699)
48 3ajr_A NDP-sugar epimerase; L- 100.0 6.8E-41 2.3E-45 320.0 30.3 303 81-414 1-312 (317)
49 2ydy_A Methionine adenosyltran 100.0 3.4E-41 1.2E-45 321.9 24.9 292 79-410 2-299 (315)
50 2hrz_A AGR_C_4963P, nucleoside 100.0 1.9E-40 6.6E-45 320.3 26.7 306 76-408 11-337 (342)
51 1y1p_A ARII, aldehyde reductas 100.0 3.1E-40 1.1E-44 318.5 22.6 305 76-408 8-341 (342)
52 2v6g_A Progesterone 5-beta-red 100.0 6.7E-39 2.3E-43 312.0 30.1 296 79-410 1-360 (364)
53 2c29_D Dihydroflavonol 4-reduc 100.0 8.8E-39 3E-43 308.1 26.0 306 77-411 3-323 (337)
54 2rh8_A Anthocyanidin reductase 100.0 1.9E-39 6.3E-44 312.9 20.6 306 79-410 9-333 (338)
55 2p4h_X Vestitone reductase; NA 100.0 3.1E-38 1.1E-42 302.2 28.4 304 79-410 1-319 (322)
56 3ius_A Uncharacterized conserv 100.0 8.3E-39 2.9E-43 301.1 23.3 269 79-406 5-283 (286)
57 2ggs_A 273AA long hypothetical 100.0 1E-36 3.4E-41 284.8 27.8 268 80-400 1-272 (273)
58 4f6c_A AUSA reductase domain p 100.0 2.6E-35 8.9E-40 293.1 22.8 308 75-414 65-417 (427)
59 2gn4_A FLAA1 protein, UDP-GLCN 100.0 2.2E-34 7.5E-39 278.2 26.9 245 70-358 12-262 (344)
60 4b4o_A Epimerase family protei 100.0 5.5E-35 1.9E-39 276.8 22.1 276 80-406 1-294 (298)
61 3oh8_A Nucleoside-diphosphate 100.0 1.6E-35 5.6E-40 301.1 17.1 282 79-407 147-443 (516)
62 2jl1_A Triphenylmethane reduct 100.0 2.6E-34 8.9E-39 270.4 23.4 261 80-405 1-286 (287)
63 4dqv_A Probable peptide synthe 100.0 3.9E-34 1.3E-38 288.3 25.7 270 75-362 69-383 (478)
64 4f6l_B AUSA reductase domain p 100.0 2.4E-34 8.2E-39 292.3 19.5 310 77-416 148-500 (508)
65 3nzo_A UDP-N-acetylglucosamine 100.0 7.9E-33 2.7E-37 272.4 27.6 245 77-361 33-285 (399)
66 2zcu_A Uncharacterized oxidore 100.0 1.2E-33 4.1E-38 265.7 19.3 261 81-408 1-286 (286)
67 3ay3_A NAD-dependent epimerase 100.0 4.2E-33 1.4E-37 259.6 20.2 236 79-405 2-238 (267)
68 3st7_A Capsular polysaccharide 100.0 6.4E-34 2.2E-38 277.7 15.2 251 80-402 1-254 (369)
69 3dhn_A NAD-dependent epimerase 100.0 2.1E-33 7.1E-38 255.1 16.8 224 79-348 4-227 (227)
70 3rft_A Uronate dehydrogenase; 100.0 1.8E-31 6.2E-36 248.7 23.9 211 78-346 2-213 (267)
71 3i6i_A Putative leucoanthocyan 100.0 4E-32 1.4E-36 262.6 19.8 288 77-414 8-325 (346)
72 3e8x_A Putative NAD-dependent 100.0 1.5E-31 5.2E-36 244.5 17.7 220 73-354 15-235 (236)
73 3e48_A Putative nucleoside-dip 100.0 4.3E-30 1.5E-34 241.9 24.2 258 80-402 1-279 (289)
74 3dqp_A Oxidoreductase YLBE; al 100.0 1.1E-31 3.7E-36 242.6 12.0 209 80-352 1-210 (219)
75 3svt_A Short-chain type dehydr 100.0 9.9E-30 3.4E-34 238.7 19.4 254 75-362 7-277 (281)
76 2wm3_A NMRA-like family domain 100.0 7.4E-30 2.5E-34 241.6 18.6 236 79-366 5-242 (299)
77 3h2s_A Putative NADH-flavin re 100.0 1.1E-29 3.8E-34 229.9 17.9 218 80-347 1-221 (224)
78 1xq6_A Unknown protein; struct 100.0 1.3E-29 4.3E-34 233.5 17.2 233 77-359 2-252 (253)
79 3ew7_A LMO0794 protein; Q8Y8U8 100.0 1.5E-29 5.2E-34 228.3 16.1 218 80-348 1-220 (221)
80 2bgk_A Rhizome secoisolaricire 100.0 1E-28 3.4E-33 231.3 21.4 246 75-356 12-276 (278)
81 3m1a_A Putative dehydrogenase; 100.0 5E-29 1.7E-33 233.9 18.0 245 77-359 3-268 (281)
82 1fmc_A 7 alpha-hydroxysteroid 100.0 1.9E-28 6.5E-33 226.4 20.5 232 76-346 8-254 (255)
83 3tzq_B Short-chain type dehydr 100.0 1.5E-27 5E-32 222.7 26.1 226 75-342 7-250 (271)
84 1w6u_A 2,4-dienoyl-COA reducta 100.0 1.2E-28 4.2E-33 233.6 18.6 250 75-360 22-288 (302)
85 1spx_A Short-chain reductase f 100.0 3.6E-28 1.2E-32 227.6 21.4 247 76-357 3-277 (278)
86 1cyd_A Carbonyl reductase; sho 100.0 3E-28 1E-32 223.6 19.8 227 76-343 4-242 (244)
87 4e6p_A Probable sorbitol dehyd 100.0 4.4E-29 1.5E-33 231.5 13.7 237 75-345 4-259 (259)
88 2a35_A Hypothetical protein PA 100.0 2.3E-29 8E-34 226.3 10.7 206 78-347 4-212 (215)
89 3awd_A GOX2181, putative polyo 100.0 1.6E-27 5.5E-32 220.9 21.9 231 76-342 10-257 (260)
90 3sx2_A Putative 3-ketoacyl-(ac 100.0 2.2E-27 7.5E-32 222.3 22.8 247 74-342 8-275 (278)
91 3s55_A Putative short-chain de 100.0 1.5E-27 5.2E-32 223.8 21.6 247 74-345 5-279 (281)
92 3pk0_A Short-chain dehydrogena 100.0 4E-27 1.4E-31 218.6 23.1 233 74-344 5-253 (262)
93 3gaf_A 7-alpha-hydroxysteroid 100.0 1.5E-27 5.1E-32 220.7 19.9 233 75-346 8-255 (256)
94 3rih_A Short chain dehydrogena 100.0 3.3E-27 1.1E-31 222.5 22.5 234 73-344 35-284 (293)
95 1xgk_A Nitrogen metabolite rep 100.0 7.2E-28 2.5E-32 233.1 18.0 238 78-367 4-246 (352)
96 3ai3_A NADPH-sorbose reductase 100.0 1.3E-27 4.5E-32 222.0 19.1 234 76-345 4-262 (263)
97 3un1_A Probable oxidoreductase 100.0 4.1E-27 1.4E-31 218.2 22.3 218 76-345 25-258 (260)
98 3osu_A 3-oxoacyl-[acyl-carrier 100.0 4.3E-27 1.5E-31 216.3 22.2 226 77-342 2-244 (246)
99 3d3w_A L-xylulose reductase; u 100.0 2.7E-27 9.1E-32 217.3 20.1 227 76-343 4-242 (244)
100 1xq1_A Putative tropinone redu 100.0 5.1E-27 1.7E-31 218.3 21.7 230 75-343 10-256 (266)
101 1qyd_A Pinoresinol-lariciresin 100.0 8.1E-28 2.8E-32 228.9 16.5 240 79-367 4-250 (313)
102 3imf_A Short chain dehydrogena 100.0 5.5E-27 1.9E-31 217.1 21.6 233 76-345 3-253 (257)
103 2dkn_A 3-alpha-hydroxysteroid 100.0 4.6E-28 1.6E-32 223.6 13.9 229 79-348 1-252 (255)
104 3oid_A Enoyl-[acyl-carrier-pro 100.0 5.1E-27 1.8E-31 217.3 20.8 230 77-344 2-248 (258)
105 3qiv_A Short-chain dehydrogena 100.0 2.6E-27 9E-32 218.6 18.8 229 75-345 5-252 (253)
106 3v2h_A D-beta-hydroxybutyrate 100.0 8.1E-27 2.8E-31 218.7 22.2 242 74-342 20-278 (281)
107 2wyu_A Enoyl-[acyl carrier pro 100.0 4.9E-27 1.7E-31 217.9 20.5 235 76-348 5-258 (261)
108 3ijr_A Oxidoreductase, short c 100.0 9.9E-27 3.4E-31 219.2 22.6 233 75-344 43-289 (291)
109 3tpc_A Short chain alcohol deh 100.0 9.1E-27 3.1E-31 215.6 21.8 226 76-345 4-255 (257)
110 2cfc_A 2-(R)-hydroxypropyl-COM 100.0 6.5E-27 2.2E-31 215.5 20.6 227 79-342 2-247 (250)
111 2bka_A CC3, TAT-interacting pr 100.0 1.4E-27 4.7E-32 218.8 16.0 200 77-318 16-218 (242)
112 2ae2_A Protein (tropinone redu 100.0 6.8E-27 2.3E-31 216.8 20.8 232 76-345 6-257 (260)
113 1ja9_A 4HNR, 1,3,6,8-tetrahydr 99.9 5.2E-27 1.8E-31 219.1 19.8 232 74-342 16-273 (274)
114 2zat_A Dehydrogenase/reductase 99.9 3.2E-27 1.1E-31 219.0 18.1 233 75-345 10-259 (260)
115 3pgx_A Carveol dehydrogenase; 99.9 1.4E-26 4.8E-31 217.1 22.6 238 74-342 10-277 (280)
116 2pd6_A Estradiol 17-beta-dehyd 99.9 4.2E-27 1.4E-31 218.5 18.8 238 76-349 4-262 (264)
117 2wsb_A Galactitol dehydrogenas 99.9 7E-27 2.4E-31 215.8 20.0 229 75-342 7-251 (254)
118 4egf_A L-xylulose reductase; s 99.9 3.1E-27 1E-31 219.9 17.6 235 74-344 15-265 (266)
119 3gvc_A Oxidoreductase, probabl 99.9 9.4E-27 3.2E-31 217.7 20.8 232 75-345 25-275 (277)
120 3pxx_A Carveol dehydrogenase; 99.9 6.8E-27 2.3E-31 219.9 19.9 257 74-345 5-286 (287)
121 1hdo_A Biliverdin IX beta redu 99.9 6.1E-27 2.1E-31 208.8 18.4 203 79-342 3-205 (206)
122 3o38_A Short chain dehydrogena 99.9 3E-26 1E-30 213.1 23.7 232 74-342 17-265 (266)
123 1qsg_A Enoyl-[acyl-carrier-pro 99.9 8.2E-27 2.8E-31 216.9 19.8 231 77-345 7-257 (265)
124 3lyl_A 3-oxoacyl-(acyl-carrier 99.9 2.9E-26 9.9E-31 210.8 23.2 229 76-344 2-246 (247)
125 3gem_A Short chain dehydrogena 99.9 2.4E-26 8.2E-31 213.0 22.6 223 74-345 22-258 (260)
126 2gas_A Isoflavone reductase; N 99.9 6.7E-27 2.3E-31 221.9 19.3 235 79-367 2-244 (307)
127 1ae1_A Tropinone reductase-I; 99.9 2.9E-26 9.9E-31 214.1 23.2 230 76-343 18-268 (273)
128 3f9i_A 3-oxoacyl-[acyl-carrier 99.9 3.2E-26 1.1E-30 210.8 22.9 227 74-343 9-247 (249)
129 3ucx_A Short chain dehydrogena 99.9 1.5E-26 5.2E-31 214.9 20.8 229 76-343 8-262 (264)
130 4eso_A Putative oxidoreductase 99.9 8E-27 2.7E-31 215.6 18.8 232 76-348 5-253 (255)
131 2p91_A Enoyl-[acyl-carrier-pro 99.9 4.9E-26 1.7E-30 213.9 24.4 229 76-342 18-266 (285)
132 3tox_A Short chain dehydrogena 99.9 1.7E-26 5.8E-31 216.3 21.1 235 76-347 5-258 (280)
133 3i4f_A 3-oxoacyl-[acyl-carrier 99.9 2.1E-26 7.1E-31 214.0 21.3 232 77-345 5-254 (264)
134 4dmm_A 3-oxoacyl-[acyl-carrier 99.9 3.4E-26 1.2E-30 213.1 22.8 229 75-344 24-268 (269)
135 2hq1_A Glucose/ribitol dehydro 99.9 2.5E-26 8.7E-31 211.1 21.4 225 77-342 3-245 (247)
136 3n74_A 3-ketoacyl-(acyl-carrie 99.9 1.5E-26 5.1E-31 214.6 20.0 234 75-346 5-258 (261)
137 3c1o_A Eugenol synthase; pheny 99.9 5.5E-27 1.9E-31 224.0 17.6 236 78-367 3-245 (321)
138 2fwm_X 2,3-dihydro-2,3-dihydro 99.9 5.9E-26 2E-30 209.2 23.9 227 76-343 4-247 (250)
139 3sju_A Keto reductase; short-c 99.9 1.9E-26 6.6E-31 215.9 20.9 230 75-342 20-276 (279)
140 3ek2_A Enoyl-(acyl-carrier-pro 99.9 1.2E-26 4.2E-31 216.2 19.4 240 74-351 9-268 (271)
141 1iy8_A Levodione reductase; ox 99.9 3.6E-26 1.2E-30 212.8 22.5 234 76-345 10-266 (267)
142 1qyc_A Phenylcoumaran benzylic 99.9 2.9E-27 9.9E-32 224.5 15.3 238 79-367 4-245 (308)
143 2d1y_A Hypothetical protein TT 99.9 3.9E-26 1.3E-30 211.2 22.5 230 76-346 3-249 (256)
144 3rd5_A Mypaa.01249.C; ssgcid, 99.9 1.6E-26 5.6E-31 217.8 20.3 234 75-341 12-254 (291)
145 3ftp_A 3-oxoacyl-[acyl-carrier 99.9 8.9E-27 3E-31 217.1 18.3 231 74-344 23-269 (270)
146 4fc7_A Peroxisomal 2,4-dienoyl 99.9 6.3E-27 2.2E-31 219.1 17.3 236 74-346 22-274 (277)
147 1mxh_A Pteridine reductase 2; 99.9 3.6E-26 1.2E-30 213.8 22.3 228 76-342 8-271 (276)
148 1gee_A Glucose 1-dehydrogenase 99.9 2.1E-26 7.3E-31 213.4 20.5 231 76-343 4-251 (261)
149 3k31_A Enoyl-(acyl-carrier-pro 99.9 9.5E-26 3.2E-30 213.0 25.1 233 75-345 26-277 (296)
150 3grp_A 3-oxoacyl-(acyl carrier 99.9 1.5E-26 5.2E-31 215.0 19.3 226 74-342 22-263 (266)
151 2r6j_A Eugenol synthase 1; phe 99.9 8.1E-27 2.8E-31 222.6 17.7 230 80-367 12-244 (318)
152 3uf0_A Short-chain dehydrogena 99.9 1.5E-26 5.3E-31 215.8 19.1 231 75-344 27-272 (273)
153 1hdc_A 3-alpha, 20 beta-hydrox 99.9 4.1E-26 1.4E-30 210.8 21.7 224 77-343 3-243 (254)
154 3op4_A 3-oxoacyl-[acyl-carrier 99.9 4.8E-26 1.6E-30 209.5 22.1 225 75-342 5-245 (248)
155 3vtz_A Glucose 1-dehydrogenase 99.9 5E-26 1.7E-30 211.9 22.4 222 74-343 9-254 (269)
156 4ibo_A Gluconate dehydrogenase 99.9 3.5E-27 1.2E-31 219.9 14.6 233 75-345 22-270 (271)
157 2pnf_A 3-oxoacyl-[acyl-carrier 99.9 2.2E-26 7.4E-31 211.6 19.6 228 76-342 4-247 (248)
158 3ak4_A NADH-dependent quinucli 99.9 4.3E-26 1.5E-30 211.8 21.5 228 76-343 9-261 (263)
159 1vl8_A Gluconate 5-dehydrogena 99.9 3.5E-26 1.2E-30 212.8 20.8 234 72-342 14-264 (267)
160 4b79_A PA4098, probable short- 99.9 6.1E-26 2.1E-30 205.5 21.6 221 77-342 9-239 (242)
161 3afn_B Carbonyl reductase; alp 99.9 2.4E-26 8.3E-31 212.5 19.4 229 76-342 4-255 (258)
162 3tsc_A Putative oxidoreductase 99.9 5.2E-26 1.8E-30 212.9 21.8 241 75-342 7-274 (277)
163 3grk_A Enoyl-(acyl-carrier-pro 99.9 1.4E-25 4.8E-30 211.5 24.7 233 74-344 26-277 (293)
164 3v8b_A Putative dehydrogenase, 99.9 3.4E-26 1.2E-30 214.6 20.2 237 75-342 24-279 (283)
165 1xhl_A Short-chain dehydrogena 99.9 8.2E-27 2.8E-31 220.4 16.0 247 75-356 22-294 (297)
166 4dqx_A Probable oxidoreductase 99.9 1E-25 3.4E-30 210.8 23.1 230 75-345 23-272 (277)
167 3uve_A Carveol dehydrogenase ( 99.9 2.7E-25 9.3E-30 208.9 26.2 243 75-344 7-285 (286)
168 4fn4_A Short chain dehydrogena 99.9 7.2E-26 2.5E-30 207.3 21.6 230 76-342 4-251 (254)
169 3qlj_A Short chain dehydrogena 99.9 1.2E-26 4.2E-31 221.8 17.1 245 74-361 22-314 (322)
170 3r3s_A Oxidoreductase; structu 99.9 1.4E-26 4.8E-31 218.5 17.2 234 75-344 45-293 (294)
171 3is3_A 17BETA-hydroxysteroid d 99.9 1.1E-25 3.6E-30 209.9 22.8 234 74-342 13-269 (270)
172 2uvd_A 3-oxoacyl-(acyl-carrier 99.9 6.2E-26 2.1E-30 208.6 20.8 226 77-342 2-244 (246)
173 1h5q_A NADP-dependent mannitol 99.9 3.6E-26 1.2E-30 212.3 19.4 237 76-343 11-263 (265)
174 1nff_A Putative oxidoreductase 99.9 1.2E-25 4.2E-30 208.3 22.9 220 76-343 4-239 (260)
175 2o23_A HADH2 protein; HSD17B10 99.9 1.1E-25 3.6E-30 209.2 22.4 226 75-344 8-261 (265)
176 4da9_A Short-chain dehydrogena 99.9 6E-26 2E-30 212.7 20.8 232 74-343 24-276 (280)
177 3r1i_A Short-chain type dehydr 99.9 1.1E-25 3.8E-30 210.3 22.5 231 75-343 28-274 (276)
178 3f1l_A Uncharacterized oxidore 99.9 1.1E-25 3.8E-30 207.6 22.2 226 75-347 8-251 (252)
179 1yxm_A Pecra, peroxisomal tran 99.9 4.3E-26 1.5E-30 216.2 19.9 235 75-345 14-268 (303)
180 3t7c_A Carveol dehydrogenase; 99.9 3.2E-25 1.1E-29 209.7 25.8 238 74-344 23-298 (299)
181 4e3z_A Putative oxidoreductase 99.9 4.6E-26 1.6E-30 212.6 19.6 228 77-341 24-271 (272)
182 2pd4_A Enoyl-[acyl-carrier-pro 99.9 1.3E-25 4.5E-30 209.9 22.7 229 76-342 3-250 (275)
183 2rhc_B Actinorhodin polyketide 99.9 3.2E-26 1.1E-30 214.3 18.4 227 76-342 19-274 (277)
184 1xkq_A Short-chain reductase f 99.9 3.3E-26 1.1E-30 214.5 18.4 235 76-343 3-263 (280)
185 1x1t_A D(-)-3-hydroxybutyrate 99.9 8.3E-26 2.8E-30 209.5 20.9 237 77-342 2-257 (260)
186 2c07_A 3-oxoacyl-(acyl-carrier 99.9 1.1E-25 3.6E-30 211.6 21.7 228 75-342 40-283 (285)
187 3oig_A Enoyl-[acyl-carrier-pro 99.9 3.5E-25 1.2E-29 205.9 25.1 233 76-344 4-255 (266)
188 3tjr_A Short chain dehydrogena 99.9 2E-25 6.9E-30 211.3 23.6 221 74-318 26-267 (301)
189 1zk4_A R-specific alcohol dehy 99.9 8E-26 2.7E-30 208.3 20.2 229 76-343 3-249 (251)
190 2q2v_A Beta-D-hydroxybutyrate 99.9 2E-25 6.9E-30 206.3 22.8 231 77-343 2-253 (255)
191 2z1n_A Dehydrogenase; reductas 99.9 1.3E-25 4.6E-30 208.1 21.7 240 76-342 4-258 (260)
192 2ag5_A DHRS6, dehydrogenase/re 99.9 5.4E-26 1.9E-30 208.9 18.9 225 76-342 3-243 (246)
193 3edm_A Short chain dehydrogena 99.9 1.5E-25 5.2E-30 207.5 22.0 233 76-346 5-252 (259)
194 3v2g_A 3-oxoacyl-[acyl-carrier 99.9 3.9E-25 1.3E-29 206.1 24.8 229 76-342 28-269 (271)
195 2a4k_A 3-oxoacyl-[acyl carrier 99.9 4.9E-26 1.7E-30 211.3 18.6 226 76-344 3-241 (263)
196 1hxh_A 3BETA/17BETA-hydroxyste 99.9 7.6E-26 2.6E-30 208.9 19.6 228 76-342 3-248 (253)
197 1uls_A Putative 3-oxoacyl-acyl 99.9 3E-25 1E-29 203.8 23.5 221 77-343 3-239 (245)
198 3cxt_A Dehydrogenase with diff 99.9 1.6E-25 5.4E-30 210.9 22.1 229 76-342 31-281 (291)
199 1uay_A Type II 3-hydroxyacyl-C 99.9 7E-26 2.4E-30 207.4 19.1 215 79-345 2-240 (242)
200 2ph3_A 3-oxoacyl-[acyl carrier 99.9 4.9E-26 1.7E-30 208.9 18.0 224 79-342 1-242 (245)
201 2ew8_A (S)-1-phenylethanol deh 99.9 9.8E-26 3.4E-30 207.6 19.9 226 76-342 4-246 (249)
202 3uxy_A Short-chain dehydrogena 99.9 7.3E-26 2.5E-30 210.4 19.1 223 74-345 23-266 (266)
203 3a28_C L-2.3-butanediol dehydr 99.9 1.6E-25 5.6E-30 207.3 21.4 229 79-344 2-257 (258)
204 3nrc_A Enoyl-[acyl-carrier-pro 99.9 4E-25 1.4E-29 207.1 23.6 232 74-344 21-273 (280)
205 3ezl_A Acetoacetyl-COA reducta 99.9 1E-25 3.4E-30 208.4 19.3 231 74-344 8-255 (256)
206 3lf2_A Short chain oxidoreduct 99.9 4.6E-25 1.6E-29 205.1 23.8 234 75-342 4-261 (265)
207 3rwb_A TPLDH, pyridoxal 4-dehy 99.9 3.2E-26 1.1E-30 210.6 15.7 224 76-342 3-244 (247)
208 3oec_A Carveol dehydrogenase ( 99.9 5.1E-25 1.8E-29 210.0 24.5 242 74-343 41-314 (317)
209 2dtx_A Glucose 1-dehydrogenase 99.9 1E-25 3.4E-30 209.3 18.9 216 76-342 5-246 (264)
210 4iiu_A 3-oxoacyl-[acyl-carrier 99.9 3.9E-25 1.3E-29 205.7 22.8 226 76-342 23-266 (267)
211 3h7a_A Short chain dehydrogena 99.9 3.2E-25 1.1E-29 204.5 21.9 213 76-319 4-232 (252)
212 3tl3_A Short-chain type dehydr 99.9 1.1E-25 3.6E-30 208.4 18.7 225 75-345 5-255 (257)
213 4g81_D Putative hexonate dehyd 99.9 3.8E-26 1.3E-30 209.2 15.4 231 75-342 5-251 (255)
214 4iin_A 3-ketoacyl-acyl carrier 99.9 2.4E-25 8.2E-30 207.6 21.0 230 74-342 24-269 (271)
215 1edo_A Beta-keto acyl carrier 99.9 1.3E-25 4.4E-30 206.0 18.8 225 79-342 1-242 (244)
216 3t4x_A Oxidoreductase, short c 99.9 2.6E-25 8.9E-30 206.9 21.0 239 75-345 6-265 (267)
217 3ctm_A Carbonyl reductase; alc 99.9 3E-25 1E-29 207.8 21.5 229 76-343 31-277 (279)
218 2b4q_A Rhamnolipids biosynthes 99.9 3.2E-25 1.1E-29 207.3 21.6 227 76-342 26-274 (276)
219 1g0o_A Trihydroxynaphthalene r 99.9 7.4E-25 2.5E-29 205.6 24.1 231 75-342 25-281 (283)
220 3gk3_A Acetoacetyl-COA reducta 99.9 2.1E-25 7.3E-30 207.7 20.0 232 76-345 22-269 (269)
221 3ioy_A Short-chain dehydrogena 99.9 2.4E-25 8E-30 212.5 20.5 229 75-318 4-253 (319)
222 2x9g_A PTR1, pteridine reducta 99.9 7.7E-25 2.6E-29 206.0 23.3 229 75-343 19-284 (288)
223 2yut_A Putative short-chain ox 99.9 3.1E-26 1E-30 204.7 13.0 192 80-318 1-200 (207)
224 3ksu_A 3-oxoacyl-acyl carrier 99.9 9E-26 3.1E-30 209.4 16.4 235 75-345 7-254 (262)
225 4dyv_A Short-chain dehydrogena 99.9 2.1E-25 7.4E-30 207.9 18.8 212 75-319 24-253 (272)
226 4fgs_A Probable dehydrogenase 99.9 4.9E-25 1.7E-29 203.7 20.9 228 75-342 25-270 (273)
227 4fs3_A Enoyl-[acyl-carrier-pro 99.9 2E-24 6.7E-29 199.6 24.7 232 75-342 2-252 (256)
228 3tfo_A Putative 3-oxoacyl-(acy 99.9 3.7E-25 1.3E-29 205.3 19.8 212 77-319 2-227 (264)
229 2nm0_A Probable 3-oxacyl-(acyl 99.9 5.9E-25 2E-29 202.8 21.1 218 75-343 17-250 (253)
230 1geg_A Acetoin reductase; SDR 99.9 9E-25 3.1E-29 202.0 21.9 231 79-343 2-254 (256)
231 2qhx_A Pteridine reductase 1; 99.9 9.6E-25 3.3E-29 209.0 22.8 230 76-344 43-325 (328)
232 3dii_A Short-chain dehydrogena 99.9 1.2E-24 4E-29 200.2 22.5 215 79-343 2-230 (247)
233 3kzv_A Uncharacterized oxidore 99.9 5.5E-25 1.9E-29 203.2 20.4 224 79-344 2-250 (254)
234 3rkr_A Short chain oxidoreduct 99.9 1.1E-24 3.7E-29 202.2 22.5 207 74-318 24-247 (262)
235 4hp8_A 2-deoxy-D-gluconate 3-d 99.9 2.1E-25 7.2E-30 202.4 17.1 228 75-341 5-243 (247)
236 3p19_A BFPVVD8, putative blue 99.9 6.1E-25 2.1E-29 204.2 20.3 210 76-319 13-238 (266)
237 3u5t_A 3-oxoacyl-[acyl-carrier 99.9 1.1E-24 3.8E-29 202.6 21.9 229 76-341 24-265 (267)
238 2bd0_A Sepiapterin reductase; 99.9 9.9E-25 3.4E-29 200.1 21.1 201 79-318 2-225 (244)
239 2gdz_A NAD+-dependent 15-hydro 99.9 7.8E-26 2.7E-30 210.5 13.7 239 76-349 4-258 (267)
240 3icc_A Putative 3-oxoacyl-(acy 99.9 3E-24 1E-28 198.2 24.1 230 76-342 4-253 (255)
241 3nyw_A Putative oxidoreductase 99.9 3E-25 1E-29 204.5 17.2 209 76-319 4-227 (250)
242 1sby_A Alcohol dehydrogenase; 99.9 7.1E-25 2.4E-29 202.4 19.7 219 76-341 2-239 (254)
243 4imr_A 3-oxoacyl-(acyl-carrier 99.9 1.7E-25 6E-30 208.9 15.7 228 76-341 30-274 (275)
244 3l77_A Short-chain alcohol deh 99.9 2.7E-24 9.3E-29 196.1 23.1 219 78-343 1-232 (235)
245 2ekp_A 2-deoxy-D-gluconate 3-d 99.9 5.3E-25 1.8E-29 201.4 18.5 219 79-342 2-236 (239)
246 1yo6_A Putative carbonyl reduc 99.9 9.3E-25 3.2E-29 200.7 20.1 201 78-318 2-233 (250)
247 3uce_A Dehydrogenase; rossmann 99.9 4.4E-25 1.5E-29 199.8 17.4 210 76-344 3-222 (223)
248 1uzm_A 3-oxoacyl-[acyl-carrier 99.9 8.1E-25 2.8E-29 201.2 19.3 217 76-343 12-244 (247)
249 4e4y_A Short chain dehydrogena 99.9 3.8E-25 1.3E-29 203.0 16.7 220 77-343 2-242 (244)
250 1yde_A Retinal dehydrogenase/r 99.9 1.1E-24 3.7E-29 203.1 20.0 232 76-351 6-258 (270)
251 4dry_A 3-oxoacyl-[acyl-carrier 99.9 4.9E-25 1.7E-29 206.5 17.4 216 75-319 29-262 (281)
252 3d7l_A LIN1944 protein; APC893 99.9 2.9E-25 9.8E-30 197.7 14.8 180 80-315 4-191 (202)
253 1zem_A Xylitol dehydrogenase; 99.9 7.5E-25 2.6E-29 203.3 18.0 228 76-341 4-262 (262)
254 3rku_A Oxidoreductase YMR226C; 99.9 4.7E-25 1.6E-29 207.2 16.7 228 76-343 30-279 (287)
255 1sny_A Sniffer CG10964-PA; alp 99.9 6.9E-24 2.3E-28 197.2 24.2 204 74-319 16-251 (267)
256 3u9l_A 3-oxoacyl-[acyl-carrier 99.9 2.3E-24 7.7E-29 205.9 21.4 177 77-265 3-197 (324)
257 4gkb_A 3-oxoacyl-[acyl-carrier 99.9 6.4E-24 2.2E-28 195.2 23.5 229 75-342 3-250 (258)
258 3ged_A Short-chain dehydrogena 99.9 5.9E-24 2E-28 193.7 22.8 213 79-342 2-229 (247)
259 3ppi_A 3-hydroxyacyl-COA dehyd 99.9 9.5E-25 3.2E-29 204.7 18.1 228 75-345 26-279 (281)
260 3gdg_A Probable NADP-dependent 99.9 3.2E-24 1.1E-28 199.5 21.6 231 76-343 17-265 (267)
261 1e7w_A Pteridine reductase; di 99.9 2.9E-24 9.9E-29 202.4 21.1 231 75-344 5-288 (291)
262 1o5i_A 3-oxoacyl-(acyl carrier 99.9 1.9E-24 6.3E-29 199.0 19.1 218 74-342 14-244 (249)
263 3asu_A Short-chain dehydrogena 99.9 6.3E-24 2.1E-28 195.4 22.5 206 80-318 1-224 (248)
264 2ehd_A Oxidoreductase, oxidore 99.9 2.7E-24 9.3E-29 196.0 19.8 196 78-318 4-215 (234)
265 1yb1_A 17-beta-hydroxysteroid 99.9 1.3E-24 4.4E-29 202.8 17.8 205 74-318 26-249 (272)
266 3l6e_A Oxidoreductase, short-c 99.9 2E-24 6.8E-29 197.0 18.6 200 78-318 2-215 (235)
267 1xg5_A ARPG836; short chain de 99.9 1.6E-24 5.6E-29 202.9 18.4 219 75-318 28-265 (279)
268 3orf_A Dihydropteridine reduct 99.9 1.4E-24 4.9E-29 200.0 17.6 208 78-344 21-245 (251)
269 1wma_A Carbonyl reductase [NAD 99.9 4.1E-24 1.4E-28 199.3 20.2 209 77-317 2-257 (276)
270 2nwq_A Probable short-chain de 99.9 4.4E-24 1.5E-28 199.0 20.2 212 76-318 19-247 (272)
271 1ooe_A Dihydropteridine reduct 99.9 1.3E-24 4.6E-29 198.4 16.0 209 78-342 2-228 (236)
272 3guy_A Short-chain dehydrogena 99.9 4E-24 1.4E-28 194.4 18.9 200 79-318 1-211 (230)
273 3r6d_A NAD-dependent epimerase 99.9 1.7E-23 5.7E-28 189.0 22.5 201 80-341 6-211 (221)
274 3zv4_A CIS-2,3-dihydrobiphenyl 99.9 6E-24 2.1E-28 199.2 20.0 229 76-343 2-256 (281)
275 1fjh_A 3alpha-hydroxysteroid d 99.9 7.1E-25 2.4E-29 202.7 13.1 225 79-344 1-250 (257)
276 3qvo_A NMRA family protein; st 99.9 8.5E-24 2.9E-28 193.0 20.0 204 77-342 21-225 (236)
277 4h15_A Short chain alcohol deh 99.9 1.3E-23 4.5E-28 193.8 21.3 221 75-342 7-257 (261)
278 3i1j_A Oxidoreductase, short c 99.9 7.2E-24 2.5E-28 194.8 19.5 208 74-318 9-236 (247)
279 3sc4_A Short chain dehydrogena 99.9 1.5E-23 5.2E-28 196.8 22.0 212 75-318 5-236 (285)
280 1dhr_A Dihydropteridine reduct 99.9 3E-24 1E-28 196.7 15.8 210 76-342 4-231 (241)
281 3kvo_A Hydroxysteroid dehydrog 99.9 2.2E-23 7.6E-28 200.6 21.3 211 74-316 40-269 (346)
282 1xu9_A Corticosteroid 11-beta- 99.9 3.1E-23 1.1E-27 194.8 21.4 208 74-318 23-247 (286)
283 2jah_A Clavulanic acid dehydro 99.9 2E-23 6.7E-28 192.0 18.1 213 76-318 4-232 (247)
284 2h7i_A Enoyl-[acyl-carrier-pro 99.9 1E-23 3.5E-28 196.4 16.2 228 76-342 4-264 (269)
285 3o26_A Salutaridine reductase; 99.9 6.2E-23 2.1E-27 194.8 20.9 213 74-318 7-295 (311)
286 3e03_A Short chain dehydrogena 99.9 7.4E-23 2.5E-27 191.0 21.0 209 76-318 3-232 (274)
287 1zmt_A Haloalcohol dehalogenas 99.9 7E-23 2.4E-27 189.1 20.3 221 79-343 1-244 (254)
288 1oaa_A Sepiapterin reductase; 99.9 3.7E-23 1.3E-27 191.5 17.2 216 76-316 3-246 (259)
289 3e9n_A Putative short-chain de 99.9 6.1E-23 2.1E-27 188.4 15.7 202 76-318 2-218 (245)
290 3u0b_A Oxidoreductase, short c 99.9 2E-22 6.9E-27 200.5 19.8 225 75-342 209-450 (454)
291 1d7o_A Enoyl-[acyl-carrier pro 99.9 9.2E-22 3.1E-26 185.8 20.2 233 76-342 5-285 (297)
292 2qq5_A DHRS1, dehydrogenase/re 99.9 5.3E-22 1.8E-26 183.8 17.9 215 77-317 3-241 (260)
293 1gz6_A Estradiol 17 beta-dehyd 99.9 7.3E-22 2.5E-26 188.1 16.7 266 76-412 6-304 (319)
294 1jtv_A 17 beta-hydroxysteroid 99.9 8.4E-22 2.9E-26 188.5 17.0 175 78-265 1-192 (327)
295 1zmo_A Halohydrin dehalogenase 99.9 3.4E-21 1.2E-25 176.6 19.8 218 79-342 1-242 (244)
296 2fr1_A Erythromycin synthase, 99.9 6.9E-21 2.3E-25 191.2 21.1 208 77-318 224-442 (486)
297 2z5l_A Tylkr1, tylactone synth 99.9 5.5E-20 1.9E-24 185.4 24.7 228 77-356 257-492 (511)
298 2o2s_A Enoyl-acyl carrier redu 99.8 7.2E-20 2.5E-24 174.2 18.6 232 76-342 6-292 (315)
299 3lt0_A Enoyl-ACP reductase; tr 99.8 1.2E-20 4.2E-25 180.6 13.2 175 78-264 1-223 (329)
300 3mje_A AMPHB; rossmann fold, o 99.8 1.6E-19 5.6E-24 180.7 20.3 208 79-318 239-457 (496)
301 3oml_A GH14720P, peroxisomal m 99.8 3.1E-20 1E-24 191.8 15.2 204 70-317 10-239 (613)
302 2ptg_A Enoyl-acyl carrier redu 99.8 6.5E-20 2.2E-24 174.9 15.3 238 76-343 6-306 (319)
303 3qp9_A Type I polyketide synth 99.8 9.7E-19 3.3E-23 177.0 18.5 207 77-318 249-483 (525)
304 2et6_A (3R)-hydroxyacyl-COA de 99.8 1.2E-17 4.1E-22 171.8 19.2 213 76-341 319-545 (604)
305 1y7t_A Malate dehydrogenase; N 99.8 1.8E-19 6.1E-24 172.3 5.1 176 79-267 4-189 (327)
306 2et6_A (3R)-hydroxyacyl-COA de 99.8 1.8E-17 6E-22 170.5 20.1 228 76-358 5-276 (604)
307 2uv8_A Fatty acid synthase sub 99.7 4.3E-17 1.5E-21 181.0 21.1 211 76-317 672-912 (1887)
308 3zu3_A Putative reductase YPO4 99.7 4.4E-17 1.5E-21 156.3 17.8 177 76-264 44-283 (405)
309 2uv9_A Fatty acid synthase alp 99.7 1.3E-16 4.5E-21 176.9 22.5 211 76-317 649-887 (1878)
310 3s8m_A Enoyl-ACP reductase; ro 99.7 3.7E-17 1.3E-21 158.3 14.7 177 78-266 60-299 (422)
311 3slk_A Polyketide synthase ext 99.7 9E-17 3.1E-21 170.1 13.8 171 77-264 528-709 (795)
312 4eue_A Putative reductase CA_C 99.7 4.7E-16 1.6E-20 151.8 17.3 176 77-264 58-297 (418)
313 2pff_A Fatty acid synthase sub 99.7 7.5E-17 2.6E-21 173.6 9.3 212 76-317 473-713 (1688)
314 2vz8_A Fatty acid synthase; tr 99.5 1.1E-13 3.8E-18 161.5 14.9 173 78-263 1883-2065(2512)
315 3zen_D Fatty acid synthase; tr 99.4 6.3E-13 2.2E-17 155.0 15.3 244 76-355 2133-2414(3089)
316 3ic5_A Putative saccharopine d 99.2 1.9E-10 6.6E-15 91.9 10.5 91 78-198 4-95 (118)
317 1b8p_A Protein (malate dehydro 99.1 5.7E-11 1.9E-15 113.1 8.0 173 78-266 4-191 (329)
318 4ggo_A Trans-2-enoyl-COA reduc 99.1 1.1E-09 3.6E-14 104.3 15.8 179 76-264 47-283 (401)
319 1lu9_A Methylene tetrahydromet 99.0 8.9E-10 3.1E-14 102.9 8.7 84 76-165 116-199 (287)
320 1smk_A Malate dehydrogenase, g 98.9 8.7E-09 3E-13 97.7 12.6 117 78-206 7-125 (326)
321 1hye_A L-lactate/malate dehydr 98.9 1.4E-08 4.9E-13 95.7 11.8 172 80-265 1-178 (313)
322 4ina_A Saccharopine dehydrogen 98.8 3E-08 1E-12 97.0 12.4 104 79-205 1-107 (405)
323 1o6z_A MDH, malate dehydrogena 98.8 4.4E-08 1.5E-12 91.9 13.0 166 80-265 1-175 (303)
324 2hmt_A YUAA protein; RCK, KTN, 98.7 8.1E-08 2.8E-12 79.3 11.2 102 77-207 4-106 (144)
325 1u7z_A Coenzyme A biosynthesis 98.6 8.4E-08 2.9E-12 85.2 9.4 78 76-167 5-100 (226)
326 3llv_A Exopolyphosphatase-rela 98.6 3.5E-07 1.2E-11 75.4 11.4 74 78-163 5-79 (141)
327 2gk4_A Conserved hypothetical 98.6 1.5E-07 5E-12 83.8 9.2 79 78-168 2-98 (232)
328 1lss_A TRK system potassium up 98.5 9.1E-07 3.1E-11 72.5 10.6 99 78-205 3-102 (140)
329 1ff9_A Saccharopine reductase; 98.5 6.4E-07 2.2E-11 88.6 10.9 107 78-197 2-117 (450)
330 3abi_A Putative uncharacterize 98.4 9.4E-07 3.2E-11 85.2 10.8 95 77-205 14-108 (365)
331 1mld_A Malate dehydrogenase; o 98.4 2.9E-06 9.8E-11 79.8 13.3 116 80-206 1-118 (314)
332 5mdh_A Malate dehydrogenase; o 98.3 7.8E-07 2.7E-11 84.2 7.7 171 80-267 4-188 (333)
333 2g1u_A Hypothetical protein TM 98.3 1E-05 3.5E-10 67.7 13.6 77 75-163 15-93 (155)
334 2axq_A Saccharopine dehydrogen 98.3 4.1E-06 1.4E-10 83.0 12.0 79 76-165 20-99 (467)
335 3fi9_A Malate dehydrogenase; s 98.3 6E-06 2E-10 78.3 12.5 119 77-206 6-127 (343)
336 1id1_A Putative potassium chan 98.2 6.3E-06 2.1E-10 68.9 10.4 78 78-163 2-80 (153)
337 1pqw_A Polyketide synthase; ro 98.2 2.8E-06 9.6E-11 74.3 6.8 101 78-209 38-141 (198)
338 3c85_A Putative glutathione-re 98.1 1.2E-05 4E-10 69.4 10.4 76 76-163 36-114 (183)
339 3pqe_A L-LDH, L-lactate dehydr 98.1 4.5E-05 1.5E-09 71.8 13.2 117 78-206 4-123 (326)
340 3fwz_A Inner membrane protein 98.0 7.6E-05 2.6E-09 61.2 12.0 73 79-163 7-80 (140)
341 3vku_A L-LDH, L-lactate dehydr 98.0 3.2E-05 1.1E-09 72.8 10.4 119 76-206 6-126 (326)
342 3tnl_A Shikimate dehydrogenase 97.9 5E-05 1.7E-09 71.0 10.4 82 76-164 151-236 (315)
343 3l4b_C TRKA K+ channel protien 97.8 3.2E-05 1.1E-09 68.6 7.5 73 80-163 1-74 (218)
344 3gvi_A Malate dehydrogenase; N 97.8 0.00019 6.5E-09 67.5 12.9 119 76-206 4-125 (324)
345 2z2v_A Hypothetical protein PH 97.8 5.9E-05 2E-09 72.4 9.6 94 78-205 15-108 (365)
346 2eez_A Alanine dehydrogenase; 97.8 7.4E-05 2.5E-09 71.9 10.2 78 76-165 163-240 (369)
347 1v3u_A Leukotriene B4 12- hydr 97.8 2.8E-05 9.6E-10 73.7 6.8 78 77-164 144-224 (333)
348 1oju_A MDH, malate dehydrogena 97.8 0.00018 6.3E-09 66.6 11.8 116 80-206 1-119 (294)
349 3p7m_A Malate dehydrogenase; p 97.8 0.00037 1.3E-08 65.4 13.8 119 77-206 3-123 (321)
350 4aj2_A L-lactate dehydrogenase 97.7 0.00038 1.3E-08 65.6 13.0 120 76-206 16-137 (331)
351 1qor_A Quinone oxidoreductase; 97.7 3.2E-05 1.1E-09 73.1 5.5 76 78-163 140-218 (327)
352 2hcy_A Alcohol dehydrogenase 1 97.7 4.2E-05 1.5E-09 72.9 6.3 76 78-164 169-248 (347)
353 2aef_A Calcium-gated potassium 97.7 0.00011 3.7E-09 65.9 8.5 72 78-163 8-80 (234)
354 3tl2_A Malate dehydrogenase; c 97.7 0.00031 1.1E-08 65.8 11.8 119 77-206 6-128 (315)
355 3d0o_A L-LDH 1, L-lactate dehy 97.7 0.00046 1.6E-08 64.8 13.0 117 77-205 4-123 (317)
356 1yb5_A Quinone oxidoreductase; 97.7 6.8E-05 2.3E-09 71.7 7.4 77 78-164 170-249 (351)
357 2eih_A Alcohol dehydrogenase; 97.7 7.9E-05 2.7E-09 70.9 7.7 99 78-207 166-267 (343)
358 2zqz_A L-LDH, L-lactate dehydr 97.7 0.0005 1.7E-08 64.7 13.1 117 78-206 8-126 (326)
359 1y6j_A L-lactate dehydrogenase 97.7 0.0004 1.4E-08 65.3 12.3 116 78-205 6-123 (318)
360 3nep_X Malate dehydrogenase; h 97.6 0.00051 1.8E-08 64.2 12.8 116 80-206 1-119 (314)
361 1wly_A CAAR, 2-haloacrylate re 97.6 9.1E-05 3.1E-09 70.2 7.6 77 78-164 145-224 (333)
362 3gxh_A Putative phosphatase (D 97.6 4.5E-05 1.5E-09 64.0 4.8 73 89-164 26-107 (157)
363 1ez4_A Lactate dehydrogenase; 97.6 0.00047 1.6E-08 64.7 11.8 116 79-206 5-122 (318)
364 3hhp_A Malate dehydrogenase; M 97.6 0.0004 1.4E-08 64.9 11.1 116 80-206 1-119 (312)
365 4b7c_A Probable oxidoreductase 97.6 0.00011 3.8E-09 69.6 7.4 79 77-164 148-228 (336)
366 1jay_A Coenzyme F420H2:NADP+ o 97.6 7E-05 2.4E-09 66.0 5.3 73 80-163 1-73 (212)
367 1pzg_A LDH, lactate dehydrogen 97.6 0.00037 1.3E-08 65.9 10.6 117 78-205 8-132 (331)
368 2j8z_A Quinone oxidoreductase; 97.6 0.00015 5E-09 69.4 7.9 77 78-164 162-241 (354)
369 1nyt_A Shikimate 5-dehydrogena 97.5 0.0001 3.6E-09 67.6 6.5 76 76-165 116-191 (271)
370 3l9w_A Glutathione-regulated p 97.5 0.00031 1.1E-08 68.4 10.1 74 78-163 3-77 (413)
371 1ur5_A Malate dehydrogenase; o 97.5 0.0009 3.1E-08 62.6 12.9 115 80-206 3-119 (309)
372 1dih_A Dihydrodipicolinate red 97.5 2.5E-05 8.7E-10 71.7 2.2 35 78-112 4-40 (273)
373 2x0j_A Malate dehydrogenase; o 97.5 0.00071 2.4E-08 62.5 11.9 116 80-206 1-119 (294)
374 2xxj_A L-LDH, L-lactate dehydr 97.5 0.00092 3.2E-08 62.5 12.7 115 80-206 1-117 (310)
375 2j3h_A NADP-dependent oxidored 97.5 9.5E-05 3.2E-09 70.4 6.0 78 77-164 154-235 (345)
376 3t4e_A Quinate/shikimate dehyd 97.5 0.00045 1.5E-08 64.5 10.3 82 76-164 145-230 (312)
377 1jw9_B Molybdopterin biosynthe 97.5 0.00046 1.6E-08 62.4 10.0 111 77-211 29-159 (249)
378 2zb4_A Prostaglandin reductase 97.5 0.00014 4.9E-09 69.5 6.8 74 80-163 162-239 (357)
379 2v6b_A L-LDH, L-lactate dehydr 97.5 0.00062 2.1E-08 63.5 10.8 114 80-205 1-116 (304)
380 3ldh_A Lactate dehydrogenase; 97.5 0.0013 4.3E-08 61.8 12.7 117 78-206 20-139 (330)
381 4h7p_A Malate dehydrogenase; s 97.5 0.0026 8.8E-08 60.2 14.8 175 76-267 21-210 (345)
382 1nvt_A Shikimate 5'-dehydrogen 97.4 7.8E-05 2.7E-09 69.1 4.2 81 76-166 125-205 (287)
383 4eye_A Probable oxidoreductase 97.4 0.0005 1.7E-08 65.3 9.4 78 78-164 159-237 (342)
384 3jyo_A Quinate/shikimate dehyd 97.4 0.00043 1.5E-08 63.8 8.3 80 76-164 124-204 (283)
385 3qwb_A Probable quinone oxidor 97.4 0.00047 1.6E-08 65.2 8.7 77 78-164 148-227 (334)
386 3gms_A Putative NADPH:quinone 97.3 0.00045 1.5E-08 65.5 8.4 77 78-164 144-223 (340)
387 1jvb_A NAD(H)-dependent alcoho 97.3 0.00045 1.5E-08 65.8 7.6 77 78-164 170-250 (347)
388 7mdh_A Protein (malate dehydro 97.3 0.0028 9.6E-08 60.4 12.9 176 78-267 31-217 (375)
389 1ldn_A L-lactate dehydrogenase 97.3 0.002 6.7E-08 60.5 11.7 116 78-205 5-123 (316)
390 3jyn_A Quinone oxidoreductase; 97.3 0.00055 1.9E-08 64.5 7.9 77 78-164 140-219 (325)
391 4dup_A Quinone oxidoreductase; 97.2 0.00083 2.8E-08 64.1 8.7 76 78-164 167-245 (353)
392 3pi7_A NADH oxidoreductase; gr 97.2 0.0016 5.6E-08 61.9 10.7 76 79-164 165-243 (349)
393 1t2d_A LDH-P, L-lactate dehydr 97.2 0.0035 1.2E-07 58.8 12.7 118 79-206 4-127 (322)
394 4a0s_A Octenoyl-COA reductase/ 97.2 0.0015 5.1E-08 64.4 10.6 37 77-113 219-255 (447)
395 3oj0_A Glutr, glutamyl-tRNA re 97.2 0.00015 5.1E-09 59.7 2.8 71 79-165 21-91 (144)
396 1yqd_A Sinapyl alcohol dehydro 97.2 0.00075 2.6E-08 64.7 8.1 75 78-164 187-261 (366)
397 1pjc_A Protein (L-alanine dehy 97.2 0.00036 1.2E-08 66.9 5.6 77 77-165 165-241 (361)
398 1rjw_A ADH-HT, alcohol dehydro 97.2 0.00068 2.3E-08 64.3 7.4 74 78-164 164-240 (339)
399 3h8v_A Ubiquitin-like modifier 97.2 0.0032 1.1E-07 58.0 11.6 110 76-206 33-170 (292)
400 2egg_A AROE, shikimate 5-dehyd 97.2 0.0013 4.6E-08 61.0 9.1 77 76-165 138-215 (297)
401 1p9o_A Phosphopantothenoylcyst 97.2 0.0011 3.9E-08 61.4 8.5 92 77-168 34-187 (313)
402 1a5z_A L-lactate dehydrogenase 97.1 0.0038 1.3E-07 58.5 12.3 115 80-206 1-117 (319)
403 4g65_A TRK system potassium up 97.1 0.00051 1.7E-08 68.0 6.4 73 78-161 2-75 (461)
404 1guz_A Malate dehydrogenase; o 97.1 0.0016 5.6E-08 60.8 9.6 116 80-206 1-119 (310)
405 2vhw_A Alanine dehydrogenase; 97.1 0.00097 3.3E-08 64.2 7.9 77 76-164 165-241 (377)
406 1lnq_A MTHK channels, potassiu 97.1 0.001 3.6E-08 62.9 7.9 70 79-162 115-185 (336)
407 2hjr_A Malate dehydrogenase; m 97.1 0.0053 1.8E-07 57.8 12.5 114 80-206 15-132 (328)
408 2c0c_A Zinc binding alcohol de 97.1 0.0014 4.8E-08 62.7 8.6 100 78-209 163-265 (362)
409 1lld_A L-lactate dehydrogenase 97.1 0.0069 2.4E-07 56.7 13.2 116 78-204 6-123 (319)
410 1zud_1 Adenylyltransferase THI 97.0 0.0053 1.8E-07 55.5 11.7 111 77-211 26-156 (251)
411 3gaz_A Alcohol dehydrogenase s 97.0 0.0012 4E-08 62.7 7.6 76 78-164 150-226 (343)
412 2d8a_A PH0655, probable L-thre 97.0 0.0012 4E-08 62.9 7.5 76 78-164 167-246 (348)
413 2o7s_A DHQ-SDH PR, bifunctiona 97.0 0.00037 1.3E-08 70.2 3.9 39 76-115 361-399 (523)
414 1iz0_A Quinone oxidoreductase; 97.0 0.0008 2.7E-08 62.6 5.8 73 78-164 125-198 (302)
415 2ewd_A Lactate dehydrogenase,; 97.0 0.0075 2.6E-07 56.5 12.3 115 79-206 4-122 (317)
416 1p77_A Shikimate 5-dehydrogena 96.9 0.0022 7.4E-08 58.8 8.3 76 76-165 116-191 (272)
417 2cdc_A Glucose dehydrogenase g 96.9 0.00098 3.3E-08 63.9 6.0 74 76-164 178-256 (366)
418 2vn8_A Reticulon-4-interacting 96.9 0.0022 7.6E-08 61.6 8.2 76 78-164 183-258 (375)
419 1hyh_A L-hicdh, L-2-hydroxyiso 96.9 0.0074 2.5E-07 56.3 11.4 116 80-205 2-122 (309)
420 3krt_A Crotonyl COA reductase; 96.8 0.0019 6.6E-08 63.8 7.2 37 77-113 227-263 (456)
421 3fbg_A Putative arginate lyase 96.8 0.0029 1E-07 60.0 8.2 76 78-164 150-227 (346)
422 3don_A Shikimate dehydrogenase 96.8 0.00091 3.1E-08 61.3 4.4 71 76-164 114-185 (277)
423 2d4a_B Malate dehydrogenase; a 96.8 0.013 4.3E-07 54.7 12.0 115 81-206 1-117 (308)
424 1e3j_A NADP(H)-dependent ketos 96.7 0.013 4.3E-07 55.7 12.2 76 78-164 168-250 (352)
425 3m6i_A L-arabinitol 4-dehydrog 96.7 0.024 8.1E-07 54.0 14.1 79 78-164 179-262 (363)
426 2i6t_A Ubiquitin-conjugating e 96.7 0.022 7.5E-07 52.8 13.3 112 78-206 13-126 (303)
427 2vns_A Metalloreductase steap3 96.7 0.0038 1.3E-07 55.0 7.7 66 78-163 27-92 (215)
428 3uog_A Alcohol dehydrogenase; 96.7 0.0075 2.6E-07 57.6 10.2 78 78-164 189-267 (363)
429 4e4t_A Phosphoribosylaminoimid 96.7 0.0072 2.4E-07 59.0 10.0 71 76-160 32-102 (419)
430 3orq_A N5-carboxyaminoimidazol 96.7 0.0065 2.2E-07 58.4 9.6 70 77-160 10-79 (377)
431 3qy9_A DHPR, dihydrodipicolina 96.6 0.0082 2.8E-07 53.8 9.5 83 78-164 2-86 (243)
432 3o8q_A Shikimate 5-dehydrogena 96.6 0.0064 2.2E-07 55.8 8.9 74 76-164 123-197 (281)
433 3rui_A Ubiquitin-like modifier 96.6 0.022 7.6E-07 53.4 12.4 37 76-113 31-68 (340)
434 3h5n_A MCCB protein; ubiquitin 96.6 0.013 4.3E-07 55.7 10.9 110 76-207 115-243 (353)
435 3ond_A Adenosylhomocysteinase; 96.6 0.0025 8.6E-08 62.6 6.0 38 76-114 262-299 (488)
436 3p2o_A Bifunctional protein fo 96.5 0.0041 1.4E-07 56.6 6.9 58 76-165 157-214 (285)
437 3pwz_A Shikimate dehydrogenase 96.5 0.0047 1.6E-07 56.4 7.4 74 76-164 117-191 (272)
438 1gpj_A Glutamyl-tRNA reductase 96.5 0.0037 1.3E-07 60.7 7.0 72 77-164 165-237 (404)
439 2nqt_A N-acetyl-gamma-glutamyl 96.5 0.0045 1.5E-07 58.7 7.4 99 78-208 8-113 (352)
440 2ph5_A Homospermidine synthase 96.5 0.003 1E-07 61.8 6.0 94 80-207 14-114 (480)
441 1h2b_A Alcohol dehydrogenase; 96.5 0.0045 1.5E-07 59.0 7.3 76 78-164 186-264 (359)
442 1xa0_A Putative NADPH dependen 96.5 0.0036 1.2E-07 58.9 6.5 73 81-164 152-226 (328)
443 1vj0_A Alcohol dehydrogenase, 96.5 0.0076 2.6E-07 58.0 8.8 76 78-164 195-277 (380)
444 4a26_A Putative C-1-tetrahydro 96.5 0.008 2.7E-07 55.2 8.3 58 76-165 162-221 (300)
445 1xyg_A Putative N-acetyl-gamma 96.4 0.0093 3.2E-07 56.8 8.8 100 78-208 15-115 (359)
446 2dph_A Formaldehyde dismutase; 96.4 0.0098 3.3E-07 57.6 9.1 75 78-164 185-264 (398)
447 1gu7_A Enoyl-[acyl-carrier-pro 96.4 0.027 9.1E-07 53.7 12.0 38 78-115 166-204 (364)
448 1kjq_A GART 2, phosphoribosylg 96.4 0.012 4.1E-07 56.6 9.6 74 77-162 9-82 (391)
449 2pv7_A T-protein [includes: ch 96.4 0.028 9.5E-07 52.0 11.6 35 79-113 21-55 (298)
450 1edz_A 5,10-methylenetetrahydr 96.4 0.0045 1.5E-07 57.6 6.0 83 76-165 174-256 (320)
451 3d4o_A Dipicolinate synthase s 96.3 0.0094 3.2E-07 55.1 8.2 71 76-163 152-222 (293)
452 2hjs_A USG-1 protein homolog; 96.3 0.011 3.8E-07 55.9 8.6 93 79-208 6-102 (340)
453 2rir_A Dipicolinate synthase, 96.3 0.01 3.4E-07 55.1 8.1 72 76-164 154-225 (300)
454 2h6e_A ADH-4, D-arabinose 1-de 96.3 0.0034 1.2E-07 59.5 5.0 76 78-164 170-248 (344)
455 1p9l_A Dihydrodipicolinate red 96.3 0.023 8E-07 50.8 10.2 157 80-264 1-193 (245)
456 3l07_A Bifunctional protein fo 96.3 0.0074 2.5E-07 55.0 6.9 58 76-165 158-215 (285)
457 1cdo_A Alcohol dehydrogenase; 96.3 0.023 7.7E-07 54.4 10.8 75 78-164 192-272 (374)
458 3ngx_A Bifunctional protein fo 96.3 0.0069 2.4E-07 54.8 6.6 56 77-164 148-203 (276)
459 4e12_A Diketoreductase; oxidor 96.3 0.0054 1.8E-07 56.5 6.1 41 78-119 3-43 (283)
460 3q2o_A Phosphoribosylaminoimid 96.3 0.015 5.2E-07 56.0 9.5 70 77-160 12-81 (389)
461 4a5o_A Bifunctional protein fo 96.3 0.0077 2.6E-07 54.8 6.8 58 76-165 158-215 (286)
462 3tqh_A Quinone oxidoreductase; 96.2 0.0078 2.7E-07 56.4 7.2 74 78-164 152-225 (321)
463 4dll_A 2-hydroxy-3-oxopropiona 96.2 0.019 6.7E-07 53.7 9.9 67 77-162 29-95 (320)
464 2dq4_A L-threonine 3-dehydroge 96.2 0.011 3.7E-07 56.0 8.1 74 78-164 164-241 (343)
465 1uuf_A YAHK, zinc-type alcohol 96.2 0.01 3.4E-07 56.9 7.8 74 78-164 194-267 (369)
466 4g2n_A D-isomer specific 2-hyd 96.2 0.037 1.2E-06 52.3 11.5 69 75-164 169-237 (345)
467 2ozp_A N-acetyl-gamma-glutamyl 96.2 0.0075 2.6E-07 57.1 6.7 97 79-207 4-101 (345)
468 1y8q_A Ubiquitin-like 1 activa 96.2 0.02 6.7E-07 54.3 9.6 112 77-212 34-164 (346)
469 3phh_A Shikimate dehydrogenase 96.2 0.013 4.5E-07 53.2 7.9 39 79-118 118-156 (269)
470 3doj_A AT3G25530, dehydrogenas 96.1 0.0074 2.5E-07 56.3 6.4 68 76-162 18-85 (310)
471 2jhf_A Alcohol dehydrogenase E 96.1 0.028 9.5E-07 53.8 10.6 75 78-164 191-271 (374)
472 4gsl_A Ubiquitin-like modifier 96.1 0.036 1.2E-06 55.9 11.6 36 77-113 324-360 (615)
473 1e3i_A Alcohol dehydrogenase, 96.1 0.029 9.8E-07 53.7 10.5 75 78-164 195-275 (376)
474 1u8x_X Maltose-6'-phosphate gl 96.1 0.024 8.4E-07 55.8 10.0 120 79-206 28-172 (472)
475 4f3y_A DHPR, dihydrodipicolina 96.1 0.011 3.9E-07 53.8 7.0 36 77-112 5-42 (272)
476 1mv8_A GMD, GDP-mannose 6-dehy 96.0 0.013 4.5E-07 57.4 8.0 35 80-115 1-35 (436)
477 1kol_A Formaldehyde dehydrogen 96.0 0.022 7.6E-07 55.0 9.5 75 78-164 185-264 (398)
478 1f0y_A HCDH, L-3-hydroxyacyl-C 96.0 0.039 1.3E-06 51.1 10.7 41 77-118 13-53 (302)
479 1piw_A Hypothetical zinc-type 96.0 0.0075 2.6E-07 57.5 5.9 74 78-164 179-253 (360)
480 2b5w_A Glucose dehydrogenase; 96.0 0.022 7.4E-07 54.2 9.0 73 78-164 172-252 (357)
481 3p2y_A Alanine dehydrogenase/p 96.0 0.0076 2.6E-07 57.5 5.6 76 77-164 182-275 (381)
482 2fzw_A Alcohol dehydrogenase c 96.0 0.041 1.4E-06 52.5 11.0 75 78-164 190-270 (373)
483 2dpo_A L-gulonate 3-dehydrogen 96.0 0.0071 2.4E-07 56.6 5.4 42 77-119 4-45 (319)
484 1pl8_A Human sorbitol dehydrog 96.0 0.049 1.7E-06 51.7 11.3 35 78-113 171-206 (356)
485 3dr3_A N-acetyl-gamma-glutamyl 95.9 0.023 7.9E-07 53.4 8.8 103 79-208 4-109 (337)
486 2cf5_A Atccad5, CAD, cinnamyl 95.9 0.019 6.6E-07 54.6 8.4 75 78-164 180-254 (357)
487 1l7d_A Nicotinamide nucleotide 95.9 0.025 8.7E-07 54.3 9.3 39 76-115 169-207 (384)
488 3l6d_A Putative oxidoreductase 95.9 0.015 5.3E-07 54.0 7.5 67 77-162 7-73 (306)
489 2dwc_A PH0318, 433AA long hypo 95.9 0.02 7E-07 55.9 8.7 74 78-163 18-91 (433)
490 1s6y_A 6-phospho-beta-glucosid 95.9 0.035 1.2E-06 54.4 10.2 120 79-206 7-153 (450)
491 1x13_A NAD(P) transhydrogenase 95.9 0.012 4.2E-07 56.9 6.9 39 76-115 169-207 (401)
492 3evt_A Phosphoglycerate dehydr 95.9 0.051 1.7E-06 50.8 10.9 70 74-164 132-201 (324)
493 4dgs_A Dehydrogenase; structur 95.9 0.022 7.4E-07 53.7 8.4 65 75-163 167-231 (340)
494 3two_A Mannitol dehydrogenase; 95.9 0.012 4E-07 55.8 6.7 71 77-165 175-245 (348)
495 1p0f_A NADP-dependent alcohol 95.9 0.033 1.1E-06 53.2 9.8 75 78-164 191-271 (373)
496 4dio_A NAD(P) transhydrogenase 95.9 0.017 5.8E-07 55.5 7.6 77 77-165 188-286 (405)
497 4dvj_A Putative zinc-dependent 95.9 0.016 5.6E-07 55.2 7.5 76 78-164 171-249 (363)
498 3vtf_A UDP-glucose 6-dehydroge 95.9 0.065 2.2E-06 52.2 11.8 37 77-114 19-55 (444)
499 3k5i_A Phosphoribosyl-aminoimi 95.9 0.019 6.5E-07 55.6 8.1 71 77-160 22-92 (403)
500 1ys4_A Aspartate-semialdehyde 95.9 0.018 6.3E-07 54.7 7.8 32 80-111 9-41 (354)
No 1
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=100.00 E-value=2.5e-48 Score=376.96 Aligned_cols=319 Identities=29% Similarity=0.476 Sum_probs=269.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhh--hccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL--LERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+.+|+||||||+||||++|+++|+++|++|++++|................ ....+++++.+|++|.+++.++++++
T Consensus 22 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 101 (351)
T 3ruf_A 22 IFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGV 101 (351)
T ss_dssp HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCC
Confidence 3568999999999999999999999999999999997765443332222110 01168999999999999999999955
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHH
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAA 233 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~ 233 (424)
|+|||+||.........++...+++|+.++.+++++|++.+++ +|||+||.++||.....+++|+++. .|.+.|+.
T Consensus 102 --d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~v~~SS~~vyg~~~~~~~~E~~~~-~p~~~Y~~ 177 (351)
T 3ruf_A 102 --DHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQ-SFTYAASSSTYGDHPALPKVEENIG-NPLSPYAV 177 (351)
T ss_dssp --SEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEEGGGGTTCCCSSBCTTCCC-CCCSHHHH
T ss_pred --CEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEecHHhcCCCCCCCCccCCCC-CCCChhHH
Confidence 9999999987777777788899999999999999999999875 9999999999998888889998876 78899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC----CcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHH
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD----MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKG 309 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 309 (424)
+|+++|.+++.++++.|++++++||++||||+.... .+++.++..+..+.++.++ ++++..++|+|++|+|++
T Consensus 178 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~g~~~~~~i~v~Dva~a 254 (351)
T 3ruf_A 178 TKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYIN---GDGETSRDFCYIDNVIQM 254 (351)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEE---SSSCCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEe---CCCCeEEeeEEHHHHHHH
Confidence 999999999999988899999999999999987654 5677888899999998887 678899999999999999
Q ss_pred HHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccccccc----CCCCCCcccccCChHHHH
Q 042406 310 CLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP----LPRNGDVQFTHANISLAQ 385 (424)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~----~~~~~~~~~~~~d~s~~~ 385 (424)
++.++..... ..+++||+++++++|+.|+++.+.+.+|.+......+ .....+.....+|++|++
T Consensus 255 ~~~~~~~~~~-----------~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~ 323 (351)
T 3ruf_A 255 NILSALAKDS-----------AKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAI 323 (351)
T ss_dssp HHHHHTCCGG-----------GCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHH
T ss_pred HHHHHhhccc-----------cCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHH
Confidence 9999887322 2238999999999999999999999999843221111 122445566789999999
Q ss_pred hHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 386 RELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 386 ~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
++|||+|+++++++|+++++||+++.+
T Consensus 324 ~~lG~~p~~~~~~~l~~~~~~~~~~~~ 350 (351)
T 3ruf_A 324 DLLKYRPNIKIREGLRLSMPWYVRFLK 350 (351)
T ss_dssp HHHCCCCCCCHHHHHHHHHHHHHHHHC
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999998764
No 2
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=100.00 E-value=2.6e-48 Score=376.09 Aligned_cols=318 Identities=22% Similarity=0.374 Sum_probs=260.8
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
...+++|+||||||+||||++|+++|+++| ++|++++|........ .........+++++.+|++|.+++.++++
T Consensus 19 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 95 (346)
T 4egb_A 19 YFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLN---NVKSIQDHPNYYFVKGEIQNGELLEHVIK 95 (346)
T ss_dssp -----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGG---GGTTTTTCTTEEEEECCTTCHHHHHHHHH
T ss_pred ccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchh---hhhhhccCCCeEEEEcCCCCHHHHHHHHh
Confidence 345678999999999999999999999999 6788888865221111 11112234689999999999999999999
Q ss_pred ccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCC-CCCCCCCCCCCCCCCCh
Q 042406 152 VVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVN-KKVPFSEKDRTDQPASL 230 (424)
Q Consensus 152 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~-~~~~~~e~~~~~~~~~~ 230 (424)
+.++|+|||+||.........+++..+++|+.|+.+++++|++.+++ +|||+||.++||.. ...+++|+++. .|.+.
T Consensus 96 ~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~v~~SS~~vy~~~~~~~~~~E~~~~-~p~~~ 173 (346)
T 4egb_A 96 ERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHI-KLVQVSTDEVYGSLGKTGRFTEETPL-APNSP 173 (346)
T ss_dssp HHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTS-EEEEEEEGGGGCCCCSSCCBCTTSCC-CCCSH
T ss_pred hcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEeCchHHhCCCCcCCCcCCCCCC-CCCCh
Confidence 86679999999987766566778899999999999999999999875 99999999999976 45678888866 78899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHH
Q 042406 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
|+.+|+++|.+++.+++++|++++++||+.||||+.....+++.++..+..+.++.++ ++++..++|+|++|+|+++
T Consensus 174 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~Dva~a~ 250 (346)
T 4egb_A 174 YSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLY---GDGLNVRDWLHVTDHCSAI 250 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEE---TTSCCEECEEEHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceee---CCCCeEEeeEEHHHHHHHH
Confidence 9999999999999999888999999999999999887777888899999999998887 6788999999999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCC
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGY 390 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~ 390 (424)
+.+++.+.. +++||+++++++|+.|+++.+.+.+|.+............+.....+|++|++++|||
T Consensus 251 ~~~~~~~~~-------------g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 317 (346)
T 4egb_A 251 DVVLHKGRV-------------GEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDW 317 (346)
T ss_dssp HHHHHHCCT-------------TCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCC
T ss_pred HHHHhcCCC-------------CCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCC
Confidence 999987642 2799999999999999999999999987763333223345556677999999999999
Q ss_pred cccCCHHHHHHHHHHHHHHHhc
Q 042406 391 MPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 391 ~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
+|+++++++|+++++||+++.+
T Consensus 318 ~p~~~~~e~l~~~~~~~~~~~~ 339 (346)
T 4egb_A 318 EPKYTFEQGLQETVQWYEKNEE 339 (346)
T ss_dssp CCCCCHHHHHHHHHHHHHHCHH
T ss_pred CCCCCHHHHHHHHHHHHHhhhh
Confidence 9999999999999999998654
No 3
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=100.00 E-value=2.4e-47 Score=368.54 Aligned_cols=320 Identities=25% Similarity=0.383 Sum_probs=264.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.+|+||||||+||||++|+++|+++|++|++++|+.+........... ....++.++.+|++|.+++.++++..++|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEK--ITGKTPAFHETDVSDERALARIFDAHPITA 81 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHH--HHSCCCEEECCCTTCHHHHHHHHHHSCCCE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHh--hcCCCceEEEeecCCHHHHHHHHhccCCcE
Confidence 568999999999999999999999999999999987655443332221 224578999999999999999999666799
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
||||||.........++...+++|+.++.+++++|++.+.+ +||++||.++||.....+++|+.+. .|.+.|+.||++
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~SS~~~~g~~~~~~~~e~~~~-~~~~~Y~~sK~~ 159 (341)
T 3enk_A 82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVK-RIVFSSSATVYGVPERSPIDETFPL-SATNPYGQTKLM 159 (341)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGBCSCSSSSBCTTSCC-BCSSHHHHHHHH
T ss_pred EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCC-EEEEEecceEecCCCCCCCCCCCCC-CCCChhHHHHHH
Confidence 99999997766667778899999999999999999998875 9999999999998777788888866 688999999999
Q ss_pred HHHHHHHHHHHhC-CcEEEEEeccccCCCCC----------CCCcHHHHHHHHHcC-CceeEEec---CCCCcccccccc
Q 042406 238 GEAIAHAYNHIYG-LSITGLRFFTVYGPWGR----------PDMAYFFFTRDIIRG-KRITVYEA---PDGASVARDFTY 302 (424)
Q Consensus 238 ~e~~~~~~~~~~~-i~~~~vrp~~v~G~~~~----------~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~i~ 302 (424)
+|.+++.++.+++ ++++++||++||||+.. .+.+.+.+....... .++.++.. .+++++.++|+|
T Consensus 160 ~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~ 239 (341)
T 3enk_A 160 AEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIH 239 (341)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred HHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEE
Confidence 9999999998875 99999999999999542 133444444433332 44555520 016789999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChH
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANIS 382 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s 382 (424)
++|+|++++.+++..... ..+++||+++++++|+.|+++.+.+.+|.+.++...+. +..+.....+|++
T Consensus 240 v~Dva~a~~~~~~~~~~~----------~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~d~~ 308 (341)
T 3enk_A 240 VVDLARGHIAALDALERR----------DASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVAR-RPGDVAECYANPA 308 (341)
T ss_dssp HHHHHHHHHHHHHHHHHH----------TSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECC-CTTCCSEECBCCH
T ss_pred HHHHHHHHHHHHHhhhcC----------CcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCC-CCCCccccccCHH
Confidence 999999999999874211 22389999999999999999999999999887766554 3556667789999
Q ss_pred HHHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 383 LAQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 383 ~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
|++++|||+|+++++++|+++++||+++.+
T Consensus 309 k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~ 338 (341)
T 3enk_A 309 AAAETIGWKAERDLERMCADHWRWQENNPR 338 (341)
T ss_dssp HHHHHHCCCCCCCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHcCCCCCCCHHHHHHHHHHHHHhcCc
Confidence 999999999999999999999999998754
No 4
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=100.00 E-value=9.8e-47 Score=359.81 Aligned_cols=298 Identities=24% Similarity=0.309 Sum_probs=258.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+||||||+||||++|+++|+++|++|++++|+.... . ..+++++.+|++ .+++.++++++ |+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~-----------~~~~~~~~~Dl~-~~~~~~~~~~~--d~V 66 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK-A-----------INDYEYRVSDYT-LEDLINQLNDV--DAV 66 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-----------------CCEEEECCCC-HHHHHHHTTTC--SEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc-c-----------CCceEEEEcccc-HHHHHHhhcCC--CEE
Confidence 47899999999999999999999999999999973211 0 127899999999 99999999955 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||+|+..... +++..+++|+.++.+++++|++.+++ +|||+||.++||.....+++|+++. .|.+.|+.+|+++
T Consensus 67 ih~a~~~~~~----~~~~~~~~n~~~~~~ll~a~~~~~~~-r~v~~SS~~vyg~~~~~~~~E~~~~-~p~~~Y~~sK~~~ 140 (311)
T 3m2p_A 67 VHLAATRGSQ----GKISEFHDNEILTQNLYDACYENNIS-NIVYASTISAYSDETSLPWNEKELP-LPDLMYGVSKLAC 140 (311)
T ss_dssp EECCCCCCSS----SCGGGTHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGCCCGGGCSBCTTSCC-CCSSHHHHHHHHH
T ss_pred EEccccCCCC----ChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEccHHHhCCCCCCCCCCCCCC-CCCchhHHHHHHH
Confidence 9999986543 66788999999999999999999875 9999999999998777888888866 7889999999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
|.+++.++.+.|++++++||+.||||+.....++..++..+..+.++.++ ++++..++|+|++|+|++++.+++.+.
T Consensus 141 E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~~~v~v~Dva~a~~~~~~~~~ 217 (311)
T 3m2p_A 141 EHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLH---ANSVAKREFLYAKDAAKSVIYALKQEK 217 (311)
T ss_dssp HHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEES---SBCCCCEEEEEHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEe---cCCCeEEceEEHHHHHHHHHHHHhcCC
Confidence 99999999988999999999999999887667788899999999988876 678899999999999999999998764
Q ss_pred ccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCcccCCHHH
Q 042406 319 KSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLET 398 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p~~~l~~ 398 (424)
. +++||+++++++|+.|+++.+.+.+|.+......+.+...+.....+|++|+++.|||+|++++++
T Consensus 218 ~-------------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~ 284 (311)
T 3m2p_A 218 V-------------SGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFAT 284 (311)
T ss_dssp C-------------CEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHH
T ss_pred C-------------CCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHH
Confidence 1 289999999999999999999999999887776665445666778899999999999999999999
Q ss_pred HHHHHHHHHHHHhcc
Q 042406 399 GLKKFVRWYLSYYNS 413 (424)
Q Consensus 399 ~l~~~v~~~~~~~~~ 413 (424)
+|+++++|+++..+.
T Consensus 285 ~l~~~~~~~~~~~~~ 299 (311)
T 3m2p_A 285 AVEEIHLLMRGLDDV 299 (311)
T ss_dssp HHHHHHHHHCC----
T ss_pred HHHHHHHHHHhcccC
Confidence 999999999876554
No 5
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=100.00 E-value=4.5e-46 Score=361.39 Aligned_cols=316 Identities=29% Similarity=0.467 Sum_probs=261.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhh--hccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL--LERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
+++|+||||||+||||++|+++|+++|++|++++|+............... ....++.++.+|++|.+++.++++++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 103 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGV- 103 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTC-
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCC-
Confidence 567899999999999999999999999999999997643222222111111 01357999999999999999999955
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
|+||||||.........+++..+++|+.++.+++++|++.+++ +||++||.++|+.....+++|+++. .|.+.|+.+
T Consensus 104 -d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~SS~~~~~~~~~~~~~E~~~~-~~~~~Y~~s 180 (352)
T 1sb8_A 104 -DYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQ-SFTYAASSSTYGDHPGLPKVEDTIG-KPLSPYAVT 180 (352)
T ss_dssp -SEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEEGGGGTTCCCSSBCTTCCC-CCCSHHHHH
T ss_pred -CEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeccHHhcCCCCCCCCCCCCCC-CCCChhHHH
Confidence 9999999986655556678889999999999999999998875 9999999999998776788888765 788999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC----CcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHH
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD----MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
|+++|.+++.+++++|++++++||+.||||+.... .+++.++..+..+.++.++ ++++..++|+|++|+|+++
T Consensus 181 K~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~g~~~~~~i~v~Dva~a~ 257 (352)
T 1sb8_A 181 KYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYIN---GDGETSRDFCYIENTVQAN 257 (352)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEE---SSSCCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEe---CCCCceEeeEEHHHHHHHH
Confidence 99999999999888899999999999999986543 4566777888888887776 6778899999999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHh---Ccccccc--cccCCCCCCcccccCChHHHH
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKIL---KVKAETK--VLPLPRNGDVQFTHANISLAQ 385 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~---g~~~~~~--~~~~~~~~~~~~~~~d~s~~~ 385 (424)
+.++..... ..+++||+++++++|+.|+++.+.+.+ |.+.... ..+ .+..+.....+|++|++
T Consensus 258 ~~~~~~~~~-----------~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~d~~k~~ 325 (352)
T 1sb8_A 258 LLAATAGLD-----------ARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRD-FREGDVRHSLADISKAA 325 (352)
T ss_dssp HHHHTCCGG-----------GCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEEC-CCTTCCSBCCBCCHHHH
T ss_pred HHHHhcccc-----------CCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecC-CCccchhhccCCHHHHH
Confidence 988876321 123899999999999999999999999 8766532 222 12344456678999999
Q ss_pred hHcCCcccCCHHHHHHHHHHHHHHHh
Q 042406 386 RELGYMPTTDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 386 ~~LG~~p~~~l~~~l~~~v~~~~~~~ 411 (424)
++|||+|+++++|+|+++++||+++.
T Consensus 326 ~~lG~~p~~~~~e~l~~~~~~~~~~~ 351 (352)
T 1sb8_A 326 KLLGYAPKYDVSAGVALAMPWYIMFL 351 (352)
T ss_dssp HHTCCCCCCCHHHHHHHHHHHHHHHT
T ss_pred HHhCCCCCCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998764
No 6
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=100.00 E-value=4.4e-46 Score=356.68 Aligned_cols=302 Identities=25% Similarity=0.357 Sum_probs=254.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
.+.|+||||||+||||++|+++|+++|++|++++|+... .. + ++.++.+|++|.+++.+++++.++|
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~---------l---~~~~~~~Dl~d~~~~~~~~~~~~~d 76 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL---------P---NVEMISLDIMDSQRVKKVISDIKPD 76 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC---------T---TEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc---------c---eeeEEECCCCCHHHHHHHHHhcCCC
Confidence 456889999999999999999999999999999996542 10 1 6889999999999999999875679
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCcccCCC--CCCCCCCCCCCCCCCChHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS-DPQPAIVWASSSSVYGVN--KKVPFSEKDRTDQPASLYAA 233 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~--~~~~~~e~~~~~~~~~~Y~~ 233 (424)
+||||||.........+++..+++|+.|+.+++++|++. +. ++||++||.++||.. ...+++|+++. .|.+.|+.
T Consensus 77 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-~~iv~~SS~~v~g~~~~~~~~~~E~~~~-~~~~~Y~~ 154 (321)
T 2pk3_A 77 YIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLD-CRILTIGSSEEYGMILPEESPVSEENQL-RPMSPYGV 154 (321)
T ss_dssp EEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCC-CEEEEEEEGGGTBSCCGGGCSBCTTSCC-BCCSHHHH
T ss_pred EEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCC-CeEEEEccHHhcCCCCCCCCCCCCCCCC-CCCCccHH
Confidence 999999987766566788899999999999999999776 44 499999999999976 56678888765 67899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHc---C--CceeEEecCCCCccccccccHHHHHH
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIR---G--KRITVYEAPDGASVARDFTYIDDIVK 308 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~i~v~Dva~ 308 (424)
+|+++|.+++.+++++|++++++||++||||+......++.++..+.. + .++..+ ++++..++|+|++|+|+
T Consensus 155 sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~v~v~Dva~ 231 (321)
T 2pk3_A 155 SKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKV---GNLEAVRDFTDVRDIVQ 231 (321)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEE---SCSSCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEe---CCCCcEEeeEEHHHHHH
Confidence 999999999999888899999999999999987765566667777666 6 466665 56788999999999999
Q ss_pred HHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccC-CCCCCcccccCChHHHHhH
Q 042406 309 GCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPL-PRNGDVQFTHANISLAQRE 387 (424)
Q Consensus 309 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~d~s~~~~~ 387 (424)
+++.+++.+. .+++||+++++++|+.|+++.+.+.+|.+..+...|. .+..+.....+|++|+++.
T Consensus 232 a~~~~~~~~~-------------~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~~~ 298 (321)
T 2pk3_A 232 AYWLLSQYGK-------------TGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDS 298 (321)
T ss_dssp HHHHHHHHCC-------------TTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGGCCSSCCSBCCBCCHHHHHH
T ss_pred HHHHHHhCCC-------------CCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeeccccCCCcccchhccCHHHHHHH
Confidence 9999998752 1279999999999999999999999998766554442 1233445678999999999
Q ss_pred cCCcccCCHHHHHHHHHHHHHH
Q 042406 388 LGYMPTTDLETGLKKFVRWYLS 409 (424)
Q Consensus 388 LG~~p~~~l~~~l~~~v~~~~~ 409 (424)
|||+|+++++++|+++++||++
T Consensus 299 lG~~p~~~~~e~l~~~~~~~~~ 320 (321)
T 2pk3_A 299 TGWKPRIPLEKSLFEILQSYRQ 320 (321)
T ss_dssp HCCCCCSCHHHHHHHHHHHHHT
T ss_pred cCCCcCCCHHHHHHHHHHHHhc
Confidence 9999999999999999999975
No 7
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=100.00 E-value=1.6e-46 Score=358.35 Aligned_cols=304 Identities=26% Similarity=0.418 Sum_probs=252.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+||||++|+++|+++|++|++++|+.+..... ...+++++.+|+.|.+ +.++++. |+||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~~Dl~d~~-~~~~~~~---d~vi 67 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF---------VNPSAELHVRDLKDYS-WGAGIKG---DVVF 67 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG---------SCTTSEEECCCTTSTT-TTTTCCC---SEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh---------cCCCceEEECccccHH-HHhhcCC---CEEE
Confidence 6899999999999999999999999999999976532221 2467899999999998 8777774 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
|+||.........+++..+++|+.|+.+++++|++.+++ +|||+||.++||.....+++|+.+. .|.+.|+.+|+++|
T Consensus 68 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS~~vyg~~~~~~~~e~~~~-~p~~~Y~~sK~~~e 145 (312)
T 3ko8_A 68 HFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVR-TVVFASSSTVYGDADVIPTPEEEPY-KPISVYGAAKAAGE 145 (312)
T ss_dssp ECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEEEEGGGGCSCSSSSBCTTSCC-CCCSHHHHHHHHHH
T ss_pred ECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeCcHHHhCCCCCCCCCCCCCC-CCCChHHHHHHHHH
Confidence 999987666677888999999999999999999999875 9999999999998877788888765 78899999999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcC-CceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRG-KRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
.+++.++.++|++++++||++||||+... ..+..++..+..+ ..+.++ +++++.++|+|++|+|++++.++++..
T Consensus 146 ~~~~~~~~~~g~~~~~lrp~~v~g~~~~~-~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~i~v~Dva~a~~~~~~~~~ 221 (312)
T 3ko8_A 146 VMCATYARLFGVRCLAVRYANVVGPRLRH-GVIYDFIMKLRRNPNVLEVL---GDGTQRKSYLYVRDAVEATLAAWKKFE 221 (312)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEECTTCCS-SHHHHHHHHHHHCTTEEEEC-------CEECEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEeeccccCcCCCC-ChHHHHHHHHHhCCCCeEEc---CCCCeEEeeEEHHHHHHHHHHHHHhcc
Confidence 99999999889999999999999997654 4455667777766 445454 678899999999999999999998732
Q ss_pred ccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCC-----CCCCcccccCChHHHHhHcCCccc
Q 042406 319 KSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP-----RNGDVQFTHANISLAQRELGYMPT 393 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-----~~~~~~~~~~d~s~~~~~LG~~p~ 393 (424)
... ..+++||+++++++|+.|+++.+.+.+|.+..+...+.. ...+.....+|++|+++.|||+|+
T Consensus 222 ~~~---------~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 292 (312)
T 3ko8_A 222 EMD---------APFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPT 292 (312)
T ss_dssp HSC---------CSEEEEEESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CCCSEECBCCHHHHHHHCCCCS
T ss_pred ccC---------CCCcEEEEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCCccccccCHHHHHHHhCCCCC
Confidence 111 234899999999999999999999999988766654432 234455678999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHh
Q 042406 394 TDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 394 ~~l~~~l~~~v~~~~~~~ 411 (424)
++++++|+++++|++++.
T Consensus 293 ~~~~~~l~~~~~~~~~~~ 310 (312)
T 3ko8_A 293 MTSAEAVKKTAEDLAKEL 310 (312)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhh
Confidence 999999999999998763
No 8
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=100.00 E-value=7.4e-46 Score=357.35 Aligned_cols=309 Identities=26% Similarity=0.417 Sum_probs=253.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCch-hhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYY-ETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
++|+||||||+||||++|+++|+++| ++|++++|..... .... .......+++++.+|++|.+++.+++.++
T Consensus 2 ~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~- 76 (336)
T 2hun_A 2 HSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL----KDLEDDPRYTFVKGDVADYELVKELVRKV- 76 (336)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG----TTTTTCTTEEEEECCTTCHHHHHHHHHTC-
T ss_pred CCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH----hhhccCCceEEEEcCCCCHHHHHHHhhCC-
Confidence 46889999999999999999999997 8999999964211 1111 11112457899999999999999999755
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
|+||||||.........+++..+++|+.|+.+++++|.+.+..++||++||.++||.....+++|+++. .+.+.|+.|
T Consensus 77 -d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~-~~~~~Y~~s 154 (336)
T 2hun_A 77 -DGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRL-MPSSPYSAT 154 (336)
T ss_dssp -SEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCC-CCCSHHHHH
T ss_pred -CEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCC-CCCCccHHH
Confidence 999999998765555667889999999999999999998865459999999999997666678887765 678999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHh
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGL 314 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 314 (424)
|+++|.+++.++.+++++++++||+.||||+.....+++.++..+..+.++.++ +++++.++|+|++|+|++++.++
T Consensus 155 K~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~Dva~~~~~~~ 231 (336)
T 2hun_A 155 KAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIY---GTGKNVRDWLYVEDHVRAIELVL 231 (336)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEE---TC---CEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEe---CCCCceeeeEEHHHHHHHHHHHH
Confidence 999999999999888999999999999999876556677788888888888776 57788899999999999999998
Q ss_pred hhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccc-cccccCCCCCCcccccCChHHHHhHcCCccc
Q 042406 315 DTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE-TKVLPLPRNGDVQFTHANISLAQRELGYMPT 393 (424)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p~ 393 (424)
+... .+++||+++++++|+.|+++.+.+.+|.+.+ +...+ .+........+|++|++++|||+|.
T Consensus 232 ~~~~-------------~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~d~~k~~~~lG~~p~ 297 (336)
T 2hun_A 232 LKGE-------------SREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVE-DRPGHDLRYSLDSWKITRDLKWRPK 297 (336)
T ss_dssp HHCC-------------TTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEEC-CCTTCCCCCCBCCHHHHHHHCCCCS
T ss_pred hCCC-------------CCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccC-CCCCchhhhcCCHHHHHHHhCCCCC
Confidence 7642 2279999999999999999999999998653 22222 2233334567899999999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q 042406 394 TDLETGLKKFVRWYLSY 410 (424)
Q Consensus 394 ~~l~~~l~~~v~~~~~~ 410 (424)
++++++|+++++||+++
T Consensus 298 ~~~~~~l~~~~~~~~~~ 314 (336)
T 2hun_A 298 YTFDEGIKKTIDWYLKN 314 (336)
T ss_dssp SCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhC
Confidence 99999999999999875
No 9
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=100.00 E-value=5.8e-47 Score=370.36 Aligned_cols=314 Identities=23% Similarity=0.349 Sum_probs=260.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCC-CHHHHHHHhh
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN-DKSLLDKIFN 151 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~-d~~~v~~~~~ 151 (424)
+..+.+|+||||||+||||++|+++|+++ |++|++++|+.+..... ....+++++.+|++ |.+.+.++++
T Consensus 19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~--------~~~~~v~~~~~Dl~~d~~~~~~~~~ 90 (372)
T 3slg_A 19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL--------VKHERMHFFEGDITINKEWVEYHVK 90 (372)
T ss_dssp ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG--------GGSTTEEEEECCTTTCHHHHHHHHH
T ss_pred CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh--------ccCCCeEEEeCccCCCHHHHHHHhc
Confidence 34467899999999999999999999998 99999999976532221 12368999999999 9999999999
Q ss_pred ccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCC------
Q 042406 152 VVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD------ 225 (424)
Q Consensus 152 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~------ 225 (424)
++ |+|||+||.........++...+++|+.++.+++++|++.+ + +|||+||.++||.....++.|++.+.
T Consensus 91 ~~--d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~ 166 (372)
T 3slg_A 91 KC--DVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-K-HLVFPSTSEVYGMCADEQFDPDASALTYGPIN 166 (372)
T ss_dssp HC--SEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-C-EEEEECCGGGGBSCCCSSBCTTTCCEEECCTT
T ss_pred cC--CEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEeCcHHHhCCCCCCCCCccccccccCCCC
Confidence 76 99999999987766677888999999999999999999998 4 99999999999987777888877432
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC--------CCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP--------DMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.|.+.|+.+|+++|.+++.++++ |++++++||++||||+... ..++..++..+..+.++.++ ++++..
T Consensus 167 ~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~ 242 (372)
T 3slg_A 167 KPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLV---DGGSQK 242 (372)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEG---GGGCCE
T ss_pred CCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEe---CCCceE
Confidence 46678999999999999999888 9999999999999998642 34677888889999988876 567899
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCC-CCcccHHHHHHHHHHHhCcccccccccCCC------
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGN-TTPVPVSRLVSLLEKILKVKAETKVLPLPR------ 370 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~~~~------ 370 (424)
++|+|++|+|++++.+++.+... ..+++||+++ ++++|+.|+++.+.+.+|.+..+...+...
T Consensus 243 ~~~i~v~Dva~a~~~~~~~~~~~----------~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~ 312 (372)
T 3slg_A 243 RAFTYVDDGISALMKIIENSNGV----------ATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETT 312 (372)
T ss_dssp EECEEHHHHHHHHHHHHHCGGGT----------TTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC-
T ss_pred EEEEEHHHHHHHHHHHHhcccCc----------CCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeecc
Confidence 99999999999999999876421 1238999999 489999999999999999876544332110
Q ss_pred --------CCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 371 --------NGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 371 --------~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
..+.....+|++|+++.|||+|+++++++|+++++||+++...
T Consensus 313 ~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 363 (372)
T 3slg_A 313 SGAYYGNGYQDVQNRVPKIENTMQELGWAPQFTFDDALRQIFEAYRGHVAD 363 (372)
T ss_dssp ------------CCCCBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTCHHH
T ss_pred ccccccCCccccceeecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1244556789999999999999999999999999999876543
No 10
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=100.00 E-value=3.5e-46 Score=356.27 Aligned_cols=303 Identities=26% Similarity=0.412 Sum_probs=246.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
||+||||||+||||++|+++|+++| .|+++++....... ....++.++.+|++| +++.++++++ |+|
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~---------~~~~~~~~~~~Dl~~-~~~~~~~~~~--d~v 67 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEE---------FVNEAARLVKADLAA-DDIKDYLKGA--EEV 67 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGG---------GSCTTEEEECCCTTT-SCCHHHHTTC--SEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChh---------hcCCCcEEEECcCCh-HHHHHHhcCC--CEE
Confidence 4689999999999999999999999 55555553322111 113578999999999 9999999855 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||+|+.........+++..+++|+.|+.+++++|++.+.+ +||++||.++||.....+++|+.+. .|.+.|+.+|.++
T Consensus 68 ih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~-~iv~~SS~~vyg~~~~~~~~E~~~~-~~~~~Y~~sK~~~ 145 (313)
T 3ehe_A 68 WHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVS-RIVFTSTSTVYGEAKVIPTPEDYPT-HPISLYGASKLAC 145 (313)
T ss_dssp EECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEECCGGGGCSCSSSSBCTTSCC-CCCSHHHHHHHHH
T ss_pred EECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEeCchHHhCcCCCCCCCCCCCC-CCCCHHHHHHHHH
Confidence 9999976666667788999999999999999999998875 9999999999998777788888765 7889999999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcC-CceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRG-KRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
|.+++.++.++|++++++||++||||+... ..+..++..+..+ .++.++ +++++.++|+|++|+|++++.+++..
T Consensus 146 e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~i~v~Dva~a~~~~~~~~ 221 (313)
T 3ehe_A 146 EALIESYCHTFDMQAWIYRFANVIGRRSTH-GVIYDFIMKLKRNPEELEIL---GNGEQNKSYIYISDCVDAMLFGLRGD 221 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEECSCEESTTCCC-SHHHHHHHHHHHCTTEEEES---TTSCCEECCEEHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhcCCCEEEEeeccccCcCCCc-ChHHHHHHHHHcCCCceEEe---CCCCeEEeEEEHHHHHHHHHHHhccC
Confidence 999999999999999999999999997664 4556667777666 455554 67889999999999999999999832
Q ss_pred cccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCC--CCCCcccccCChHHHHhHcCCcccCC
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP--RNGDVQFTHANISLAQRELGYMPTTD 395 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~--~~~~~~~~~~d~s~~~~~LG~~p~~~ 395 (424)
..+++||+++++++|+.|+++.+.+.+|.+..+...+.+ ...+.....+|++|++ +|||+|+++
T Consensus 222 -------------~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lG~~p~~~ 287 (313)
T 3ehe_A 222 -------------ERVNIFNIGSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRGWKGDVPVMLLSIEKLK-RLGWKPRYN 287 (313)
T ss_dssp -------------SSEEEEECCCSCCEEHHHHHHHHHHHTTCCCEEEEC------------CCBCCHHHH-HHTCCCSCC
T ss_pred -------------CCCceEEECCCCCeeHHHHHHHHHHHhCCCCceEECCCccCCccccceeccCHHHHH-HcCCCCCCC
Confidence 223899999999999999999999999988766554422 2344456779999995 599999999
Q ss_pred HHHHHHHHHHHHHHHhccC
Q 042406 396 LETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 396 l~~~l~~~v~~~~~~~~~~ 414 (424)
++++|+++++|++++.+..
T Consensus 288 ~~e~l~~~~~~~~~~~~~~ 306 (313)
T 3ehe_A 288 SEEAVRMAVRDLVEDLDEE 306 (313)
T ss_dssp HHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhCcccc
Confidence 9999999999999988753
No 11
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=100.00 E-value=2.6e-45 Score=352.62 Aligned_cols=313 Identities=25% Similarity=0.395 Sum_probs=254.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
||+||||||+||||++|+++|+++|++|++++|....... .+ ..+++++.+|++|.+++.++++..++|+|
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d~v 71 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED--------AI-TEGAKFYNGDLRDKAFLRDVFTQENIEAV 71 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG--------GS-CTTSEEEECCTTCHHHHHHHHHHSCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh--------hc-CCCcEEEECCCCCHHHHHHHHhhcCCCEE
Confidence 4789999999999999999999999999999996543211 11 13789999999999999999985456999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||+||.........+++..+++|+.++.+++++|++.+++ +||++||.++|+.....+++|+++. .|.+.|+.+|+++
T Consensus 72 ih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~Ss~~~~~~~~~~~~~E~~~~-~~~~~Y~~sK~~~ 149 (330)
T 2c20_A 72 MHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVD-KFIFSSTAATYGEVDVDLITEETMT-NPTNTYGETKLAI 149 (330)
T ss_dssp EECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEECCGGGGCSCSSSSBCTTSCC-CCSSHHHHHHHHH
T ss_pred EECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCC-EEEEeCCceeeCCCCCCCCCcCCCC-CCCChHHHHHHHH
Confidence 9999987655455678889999999999999999998875 9999999999997766788888766 7789999999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCC---------CCCcHHHHHHHHHc-CCceeEEec---CCCCccccccccHHH
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGR---------PDMAYFFFTRDIIR-GKRITVYEA---PDGASVARDFTYIDD 305 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~---------~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~i~v~D 305 (424)
|.+++.++++++++++++||++||||+.. ...+++.++..+.. +..+.++.. ..+++..++|+|++|
T Consensus 150 e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~D 229 (330)
T 2c20_A 150 EKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVED 229 (330)
T ss_dssp HHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHH
T ss_pred HHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHH
Confidence 99999999888999999999999999631 23345555544443 334556521 015678999999999
Q ss_pred HHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHH
Q 042406 306 IVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQ 385 (424)
Q Consensus 306 va~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~ 385 (424)
+|++++.+++.+... ..+++||+++++++|+.|+++.+.+.+|.+.+....+. ...+.....+|++|++
T Consensus 230 va~a~~~~~~~~~~~----------~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~d~~k~~ 298 (330)
T 2c20_A 230 LVAAHFLGLKDLQNG----------GESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPR-RAGDPARLVASSQKAK 298 (330)
T ss_dssp HHHHHHHHHHHHHTT----------CCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECC-CSSCCSEECBCCHHHH
T ss_pred HHHHHHHHHhccccC----------CCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCC-CCCcccccccCHHHHH
Confidence 999999999875421 11379999999999999999999999998876655443 2334456789999999
Q ss_pred hHcCCcccC-CHHHHHHHHHHHHHHHhcc
Q 042406 386 RELGYMPTT-DLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 386 ~~LG~~p~~-~l~~~l~~~v~~~~~~~~~ 413 (424)
++|||+|++ +++++|+++++|++++.+.
T Consensus 299 ~~lG~~p~~~~l~~~l~~~~~~~~~~~~~ 327 (330)
T 2c20_A 299 EKLGWDPRYVNVKTIIEHAWNWHQKQPNG 327 (330)
T ss_dssp HHHCCCCSCCCHHHHHHHHHHHHHHCSSC
T ss_pred HHhCCCCccCCHHHHHHHHHHHHHHhhhc
Confidence 999999998 9999999999999887643
No 12
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=100.00 E-value=4e-46 Score=355.59 Aligned_cols=300 Identities=20% Similarity=0.244 Sum_probs=253.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+++|+||||||+||||++|+++|+++|+ +.. .....++++.+|++|.+++.+++++.++|
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~--------------~~~~~~~~~~~D~~d~~~~~~~~~~~~~d 63 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPG--------------EDWVFVSSKDADLTDTAQTRALFEKVQPT 63 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTT--------------CEEEECCTTTCCTTSHHHHHHHHHHSCCS
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------ccc--------------ccccccCceecccCCHHHHHHHHhhcCCC
Confidence 5789999999999999999999999998 110 01123455678999999999999986779
Q ss_pred EEEEcccccCc-hhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCC----CCCCCCC-h
Q 042406 157 HVMHLAAQAGV-RYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKD----RTDQPAS-L 230 (424)
Q Consensus 157 ~vi~~Ag~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~----~~~~~~~-~ 230 (424)
+|||+|+.... .....++...+++|+.|+.+++++|++.+++ +|||+||.++||.....+++|++ ++ .|.+ .
T Consensus 64 ~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~-~~v~~SS~~vyg~~~~~~~~E~~~~~~~~-~p~~~~ 141 (319)
T 4b8w_A 64 HVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGAR-KVVSCLSTCIFPDKTTYPIDETMIHNGPP-HNSNFG 141 (319)
T ss_dssp EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCS-EEEEECCGGGSCSSCCSSBCGGGGGBSCC-CSSSHH
T ss_pred EEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEcchhhcCCCCCCCccccccccCCC-CCCcch
Confidence 99999998652 3456778899999999999999999999876 99999999999988888888886 33 4445 5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC----CCcHHHHHHH----HHcCCceeEEecCCCCcccccccc
Q 042406 231 YAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP----DMAYFFFTRD----IIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~----~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
|+.+|+++|.+++.++++.+++++++||++||||+... ..+++.++.. +..+.++.++ ++++..++|+|
T Consensus 142 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~i~ 218 (319)
T 4b8w_A 142 YSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVW---GTGNPRRQFIY 218 (319)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEE---SCSCCEECEEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEe---CCCCeeEEEEe
Confidence 99999999999999998889999999999999998753 2455666666 7888888887 67889999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChH
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANIS 382 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s 382 (424)
++|+|++++.+++.+... .+++||+++++++|+.|+++.+.+.+|.+.++...+.. ..+.....+|++
T Consensus 219 v~Dva~a~~~~~~~~~~~-----------~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~d~~ 286 (319)
T 4b8w_A 219 SLDLAQLFIWVLREYNEV-----------EPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTK-SDGQFKKTASNS 286 (319)
T ss_dssp HHHHHHHHHHHHHHCCCS-----------SCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETTS-CCCCSCCCBCCH
T ss_pred HHHHHHHHHHHHhccccC-----------CceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCCC-CcCcccccCCHH
Confidence 999999999999875432 23799999999999999999999999988777665543 444556679999
Q ss_pred HHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 383 LAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 383 ~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
|+++.|||.|.++++++|+++++||+++.+.
T Consensus 287 k~~~~lg~~p~~~~~~~l~~~~~~~~~~~~~ 317 (319)
T 4b8w_A 287 KLRTYLPDFRFTPFKQAVKETCAWFTDNYEQ 317 (319)
T ss_dssp HHHHHCTTCCCCCHHHHHHHHHHHHHHSCSS
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999987664
No 13
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=100.00 E-value=2.6e-46 Score=362.23 Aligned_cols=304 Identities=23% Similarity=0.261 Sum_probs=252.5
Q ss_pred CCCCCCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH
Q 042406 70 KSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI 149 (424)
Q Consensus 70 ~~~~~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~ 149 (424)
+.......++|+||||||+||||++|+++|+++|++|++++|+.+. .++.++.+|++|.+++.++
T Consensus 10 ~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~---------------~~~~~~~~Dl~d~~~~~~~ 74 (347)
T 4id9_A 10 HSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG---------------TGGEEVVGSLEDGQALSDA 74 (347)
T ss_dssp -----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS---------------SCCSEEESCTTCHHHHHHH
T ss_pred CCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC---------------CCccEEecCcCCHHHHHHH
Confidence 3334556788999999999999999999999999999999996542 5788999999999999999
Q ss_pred hhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC--CCCCCCCCCCCCCCC
Q 042406 150 FNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV--NKKVPFSEKDRTDQP 227 (424)
Q Consensus 150 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~--~~~~~~~e~~~~~~~ 227 (424)
++++ |+|||+|+..... ..+.+..+++|+.|+.+++++|++.+++ +|||+||.++||. ....++.|+++. .|
T Consensus 75 ~~~~--d~vih~A~~~~~~--~~~~~~~~~~nv~~~~~ll~a~~~~~~~-~~V~~SS~~vyg~~~~~~~~~~E~~~~-~~ 148 (347)
T 4id9_A 75 IMGV--SAVLHLGAFMSWA--PADRDRMFAVNVEGTRRLLDAASAAGVR-RFVFASSGEVYPENRPEFLPVTEDHPL-CP 148 (347)
T ss_dssp HTTC--SEEEECCCCCCSS--GGGHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEEGGGTTTTSCSSSSBCTTSCC-CC
T ss_pred HhCC--CEEEECCcccCcc--hhhHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEECCHHHhCCCCCCCCCcCCCCCC-CC
Confidence 9965 9999999986543 2233789999999999999999998875 9999999999997 456678888766 78
Q ss_pred CChHHHHHHHHHHHHHHHHHHhCCcEEEEEecccc-------------CCCCCC-----------CCcHHHHHHHHHcCC
Q 042406 228 ASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVY-------------GPWGRP-----------DMAYFFFTRDIIRGK 283 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~-------------G~~~~~-----------~~~~~~~~~~~~~~~ 283 (424)
.+.|+.+|+++|.+++.++++.+++++++||+.|| ||+... ..++..++..+..+.
T Consensus 149 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (347)
T 4id9_A 149 NSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGE 228 (347)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSS
T ss_pred CChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCC
Confidence 89999999999999999999889999999999999 876332 345666777888888
Q ss_pred ceeEEecCCCCcccccc----ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCc
Q 042406 284 RITVYEAPDGASVARDF----TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV 359 (424)
Q Consensus 284 ~~~~~~~~~~~~~~~~~----i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~ 359 (424)
++.++ ++++..++| +|++|+|++++.+++.+.. .+++||+++++++|+.|+++.+.+.+|.
T Consensus 229 ~~~~~---g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~------------~~~~~ni~~~~~~s~~e~~~~i~~~~g~ 293 (347)
T 4id9_A 229 PSHIL---ARNENGRPFRMHITDTRDMVAGILLALDHPEA------------AGGTFNLGADEPADFAALLPKIAALTGL 293 (347)
T ss_dssp CCEEE---EECTTCCBCEECEEEHHHHHHHHHHHHHCGGG------------TTEEEEESCSSCEEHHHHHHHHHHHHCC
T ss_pred CeEEe---CCCCcccCCccCcEeHHHHHHHHHHHhcCccc------------CCCeEEECCCCcccHHHHHHHHHHHhCC
Confidence 87777 467788899 9999999999999988742 2389999999999999999999999998
Q ss_pred ccccccccCCCCCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 360 KAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
+......|... ....+|++|++++|||.|+++++++|+++++|++++..+
T Consensus 294 ~~~~~~~p~~~----~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 343 (347)
T 4id9_A 294 PIVTVDFPGDG----VYYHTSNERIRNTLGFEAEWTMDRMLEEAATARRQRLAK 343 (347)
T ss_dssp CEEEEECSSCC----CBCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC-
T ss_pred CCceeeCCCcc----cccccCHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhhhc
Confidence 87765443321 256799999999999999999999999999999988765
No 14
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=100.00 E-value=1.8e-45 Score=357.80 Aligned_cols=320 Identities=22% Similarity=0.270 Sum_probs=257.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+++|+||||||+||||++|+++|+++|++|++++|+.+.......... ...++.++.+|++|.+++.+++++.++|
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 82 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR----VADGMQSEIGDIRDQNKLLESIREFQPE 82 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT----TTTTSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc----cCCceEEEEccccCHHHHHHHHHhcCCC
Confidence 467899999999999999999999999999999997654332221111 1357899999999999999999986679
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCC-CCCCCCCCCCCCCChHHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKK-VPFSEKDRTDQPASLYAATK 235 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~-~~~~e~~~~~~~~~~Y~~sK 235 (424)
+||||||.........+++..+++|+.|+.+++++|++.+..++||++||.++||.... .++.|+++. .+.+.|+.+|
T Consensus 83 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~-~~~~~Y~~sK 161 (357)
T 1rkx_A 83 IVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAM-GGYDPYSNSK 161 (357)
T ss_dssp EEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCB-CCSSHHHHHH
T ss_pred EEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCC-CCCCccHHHH
Confidence 99999997555555677889999999999999999998762349999999999997543 366676654 6789999999
Q ss_pred HHHHHHHHHHHHHh---------CCcEEEEEeccccCCCCCC-CCcHHHHHHHHHcCCceeEEecCCCCccccccccHHH
Q 042406 236 KAGEAIAHAYNHIY---------GLSITGLRFFTVYGPWGRP-DMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305 (424)
Q Consensus 236 ~~~e~~~~~~~~~~---------~i~~~~vrp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 305 (424)
+++|.+++.++.++ |++++++||+.||||+... ..++..++..+..+.++.+ ++++..++|+|++|
T Consensus 162 ~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~~~~v~v~D 237 (357)
T 1rkx_A 162 GCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVII----RNPHAIRPWQHVLE 237 (357)
T ss_dssp HHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEEC----SCTTCEECCEETHH
T ss_pred HHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEE----CCCCCeeccEeHHH
Confidence 99999999998765 9999999999999997642 3567778888888887765 35678899999999
Q ss_pred HHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC--CcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHH
Q 042406 306 IVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT--TPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISL 383 (424)
Q Consensus 306 va~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~ 383 (424)
+|++++.+++....... ..+++||++++ +++|+.|+++.+.+.+|.+..+...+.++..+.....+|++|
T Consensus 238 va~a~~~~~~~~~~~~~--------~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k 309 (357)
T 1rkx_A 238 PLSGYLLLAQKLYTDGA--------EYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAHPHEAHYLKLDCSK 309 (357)
T ss_dssp HHHHHHHHHHHHHHTCG--------GGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC-------CCCCCCBCCHH
T ss_pred HHHHHHHHHHhhhhcCC--------CCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCCCCcCcccccCCHHH
Confidence 99999998875311000 12379999984 689999999999999998776554433334445567899999
Q ss_pred HHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 384 AQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
++++|||+|+++++++|+++++||+++...
T Consensus 310 ~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 339 (357)
T 1rkx_A 310 AKMQLGWHPRWNLNTTLEYIVGWHKNWLSG 339 (357)
T ss_dssp HHHHHCCCCCCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCCcCCcHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999987654
No 15
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=100.00 E-value=2.8e-45 Score=353.22 Aligned_cols=316 Identities=22% Similarity=0.224 Sum_probs=256.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
..+|+||||||+||||++|+++|+++|++|++++|+.+......... .....++.++.+|++|.+++.++++++++|
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRE---LGIEGDIQYEDGDMADACSVQRAVIKAQPQ 88 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHH---TTCGGGEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhh---ccccCceEEEECCCCCHHHHHHHHHHcCCC
Confidence 46789999999999999999999999999999999765422111111 112357899999999999999999987789
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK 236 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~ 236 (424)
+||||||.........+++..+++|+.|+.+++++|++.++.++||++||.++||.....+++|+++. .|.+.|+.+|+
T Consensus 89 ~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~-~p~~~Y~~sK~ 167 (335)
T 1rpn_A 89 EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPF-YPRSPYGVAKL 167 (335)
T ss_dssp EEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCC-CCCSHHHHHHH
T ss_pred EEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCC-CCCChhHHHHH
Confidence 99999998766555677889999999999999999999886349999999999998776788888766 77899999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCc---HHHHHHHHHcCCce-eEEecCCCCccccccccHHHHHHHHHH
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMA---YFFFTRDIIRGKRI-TVYEAPDGASVARDFTYIDDIVKGCLA 312 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~~~ 312 (424)
++|.+++.++++++++++++||+.+|||+...+.. +..++..+..+... ..+ +++++.++|+|++|+|++++.
T Consensus 168 ~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~---g~g~~~~~~i~v~Dva~a~~~ 244 (335)
T 1rpn_A 168 YGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRL---GNVDAKRDWGFAGDYVEAMWL 244 (335)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEE---SCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEe---CCCcceeceEEHHHHHHHHHH
Confidence 99999999998889999999999999997654332 34455666677643 333 677899999999999999999
Q ss_pred HhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccc--ccccC-CCCCCcccccCChHHHHhHcC
Q 042406 313 GLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET--KVLPL-PRNGDVQFTHANISLAQRELG 389 (424)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~--~~~~~-~~~~~~~~~~~d~s~~~~~LG 389 (424)
+++.+.. ++||+++++++|+.|+++.+.+.+|.+... ...+. .++.+.....+|++|++++||
T Consensus 245 ~~~~~~~--------------~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG 310 (335)
T 1rpn_A 245 MLQQDKA--------------DDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLG 310 (335)
T ss_dssp HHHSSSC--------------CCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHC
T ss_pred HHhcCCC--------------CEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcC
Confidence 9986531 689999999999999999999999986431 11111 123344556789999999999
Q ss_pred CcccCCHHHHHHHHHHHHHHHhcc
Q 042406 390 YMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 390 ~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
|+|+++++++|+++++|++++..+
T Consensus 311 ~~p~~~l~e~l~~~~~~~~~~~~~ 334 (335)
T 1rpn_A 311 WKPRTSLDELIRMMVEADLRRVSR 334 (335)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999987643
No 16
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=100.00 E-value=4e-45 Score=352.49 Aligned_cols=307 Identities=26% Similarity=0.440 Sum_probs=255.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC---C---CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR---G---DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
|+||||||+||||++|+++|+++ | ++|++++|......... . .......+++++.+|++|.+++.+++.++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~--~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 77 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRAN--L-APVDADPRLRFVHGDIRDAGLLARELRGV 77 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGG--G-GGGTTCTTEEEEECCTTCHHHHHHHTTTC
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhh--h-hhcccCCCeEEEEcCCCCHHHHHHHhcCC
Confidence 68999999999999999999997 8 99999999643111100 0 01112357899999999999999999755
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHH
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAA 233 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~ 233 (424)
|+||||||.........+++..+++|+.|+.+++++|++.+++ +||++||.++||.....+++|+++. .|.+.|+.
T Consensus 78 --d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~-~~v~~SS~~vyg~~~~~~~~E~~~~-~~~~~Y~~ 153 (337)
T 1r6d_A 78 --DAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG-RVVHVSTNQVYGSIDSGSWTESSPL-EPNSPYAA 153 (337)
T ss_dssp --CEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEEEGGGGCCCSSSCBCTTSCC-CCCSHHHH
T ss_pred --CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEecchHHhCCCCCCCCCCCCCC-CCCCchHH
Confidence 9999999987655555678899999999999999999998875 9999999999997656678887755 67899999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHH
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAG 313 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 313 (424)
||+++|.+++.++++++++++++||+.||||+.....++..++..+..+.++.++ +++++.++|+|++|+|++++.+
T Consensus 154 sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~Dva~a~~~~ 230 (337)
T 1r6d_A 154 SKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLY---GDGANVREWVHTDDHCRGIALV 230 (337)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEE---TTSCCEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEe---CCCCeeEeeEeHHHHHHHHHHH
Confidence 9999999999999888999999999999999876556677788888888888776 5778899999999999999999
Q ss_pred hhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccc-cccccCCCCCCcccccCChHHHHhHcCCcc
Q 042406 314 LDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE-TKVLPLPRNGDVQFTHANISLAQRELGYMP 392 (424)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p 392 (424)
++... .+++||+++++++|+.|+++.+.+.+|.+.+ +...+ .+......+.+|++|++++|||+|
T Consensus 231 ~~~~~-------------~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~d~~k~~~~lG~~p 296 (337)
T 1r6d_A 231 LAGGR-------------AGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVA-DRKGHDLRYSLDGGKIERELGYRP 296 (337)
T ss_dssp HHHCC-------------TTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEEC-CCTTCCCBCCBCCHHHHHHHCCCC
T ss_pred HhCCC-------------CCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecC-CCCCCcceeecCHHHHHHHcCCCC
Confidence 87642 1279999999999999999999999998753 22222 223333455789999999999999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 042406 393 TTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 393 ~~~l~~~l~~~v~~~~~~ 410 (424)
.++++++|+++++||+++
T Consensus 297 ~~~~~e~l~~~~~~~~~~ 314 (337)
T 1r6d_A 297 QVSFADGLARTVRWYREN 314 (337)
T ss_dssp CSCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHhc
Confidence 999999999999999875
No 17
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=100.00 E-value=1.8e-45 Score=350.98 Aligned_cols=302 Identities=29% Similarity=0.458 Sum_probs=252.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+||||++++++|+++|++|++++|....... .. ..++.++.+|++|.+++.+++++.++|+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--------~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi 71 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE--------NV-PKGVPFFRVDLRDKEGVERAFREFRPTHVS 71 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG--------GS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh--------hc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEE
Confidence 689999999999999999999999999999985432111 01 146788999999999999999865669999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCC-cccCC-CCCCCCCCCCCCCCCCChHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSS-SVYGV-NKKVPFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~-~vyg~-~~~~~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
|+|+.........+++..+++|+.|+.+++++|++.+++ +||++||. ++||. ....+++|+++. .|.+.|+.||++
T Consensus 72 ~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iv~~SS~~~~~g~~~~~~~~~E~~~~-~~~~~Y~~sK~~ 149 (311)
T 2p5y_A 72 HQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVE-KLVFASTGGAIYGEVPEGERAEETWPP-RPKSPYAASKAA 149 (311)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEEEEHHHHHCCCCTTCCBCTTSCC-CCCSHHHHHHHH
T ss_pred ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEeCCChhhcCCCCCCCCcCCCCCC-CCCChHHHHHHH
Confidence 999987655556778889999999999999999998865 99999998 99986 445577777755 678899999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCCC---CcHHHHHHHHHcCCceeEEe--cCCCCccccccccHHHHHHHHHH
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD---MAYFFFTRDIIRGKRITVYE--APDGASVARDFTYIDDIVKGCLA 312 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~v~Dva~a~~~ 312 (424)
+|.+++.+++++|++++++||++||||+.... .+++.++..+..+.++.++. .++++++.++|+|++|+|++++.
T Consensus 150 ~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~ 229 (311)
T 2p5y_A 150 FEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHAL 229 (311)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHH
Confidence 99999999888899999999999999976542 24566777788888776651 11356788999999999999999
Q ss_pred HhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCcc
Q 042406 313 GLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMP 392 (424)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p 392 (424)
+++.+ + ++||+++++++|+.|+++.+.+.+|.+.+....+. +..+.....+|++|+++ |||+|
T Consensus 230 ~~~~~----~-----------~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~d~~k~~~-lg~~p 292 (311)
T 2p5y_A 230 ALFSL----E-----------GIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPP-RPGDLERSVLSPLKLMA-HGWRP 292 (311)
T ss_dssp HHHHC----C-----------EEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECC-CTTCCSBCCBCCHHHHT-TTCCC
T ss_pred HHhCC----C-----------CEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCC-CccchhhccCCHHHHHH-CCCCC
Confidence 98764 1 79999999999999999999999998876655543 24455667899999999 99999
Q ss_pred cCCHHHHHHHHHHHHHH
Q 042406 393 TTDLETGLKKFVRWYLS 409 (424)
Q Consensus 393 ~~~l~~~l~~~v~~~~~ 409 (424)
.++++++|+++++|+++
T Consensus 293 ~~~~~~~l~~~~~~~~~ 309 (311)
T 2p5y_A 293 KVGFQEGIRLTVDHFRG 309 (311)
T ss_dssp SSCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHh
Confidence 99999999999999975
No 18
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=100.00 E-value=3.7e-45 Score=353.85 Aligned_cols=314 Identities=23% Similarity=0.357 Sum_probs=252.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhh-hHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET-SLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
+|+||||||+||||++|+++|+++|++|++++|+...... ...... ...+++++.+|++|.+++.+++++.++|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 76 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS----SLGNFEFVHGDIRNKNDVTRLITKYMPDS 76 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH----TTCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc----cCCceEEEEcCCCCHHHHHHHHhccCCCE
Confidence 4789999999999999999999999999999986422111 111111 12468999999999999999999845699
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCC----------------CCCC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVP----------------FSEK 221 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~----------------~~e~ 221 (424)
||||||.........+++..+++|+.|+.+++++|++.+.+++||++||.++||.....+ ++|+
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~ 156 (347)
T 1orr_A 77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDES 156 (347)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTT
T ss_pred EEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCcccc
Confidence 999999876555566788999999999999999999988645899999999998654433 4444
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC---CCcHHHHHHHHHcCC-----ceeEEecCCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP---DMAYFFFTRDIIRGK-----RITVYEAPDG 293 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~ 293 (424)
.+. .+.+.|+.+|+++|.+++.++.++|+++++|||+.||||+... ...+..++..++.+. ++.++ ++
T Consensus 157 ~~~-~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~ 232 (347)
T 1orr_A 157 TQL-DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTIS---GN 232 (347)
T ss_dssp SCC-CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEE---SS
T ss_pred CCC-CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEe---cC
Confidence 443 5778999999999999999998889999999999999997543 234556666666665 56665 67
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC--cccHHHHHHHHHHHhCcccccccccCCCC
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT--PVPVSRLVSLLEKILKVKAETKVLPLPRN 371 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~s~~el~~~i~~~~g~~~~~~~~~~~~~ 371 (424)
+++.++|+|++|+|++++.+++.... ..+++||++++. ++|+.|+++.+.+.+|.+..+...+ .+.
T Consensus 233 g~~~~~~i~v~Dva~a~~~~~~~~~~-----------~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~-~~~ 300 (347)
T 1orr_A 233 GKQVRDVLHAEDMISLYFTALANVSK-----------IRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLP-VRE 300 (347)
T ss_dssp SCCEEECEEHHHHHHHHHHHHHTHHH-----------HTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEEC-CCS
T ss_pred CcceEeeEEHHHHHHHHHHHHhcccc-----------CCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCC-CCC
Confidence 88999999999999999999875222 123799999986 4999999999999999887666555 234
Q ss_pred CCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 372 GDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 372 ~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
.+.....+|++|+++.|||+|+++++++|+++++|++++.+
T Consensus 301 ~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~ 341 (347)
T 1orr_A 301 SDQRVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSILE 341 (347)
T ss_dssp SCCSEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC--
T ss_pred CCcceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHH
Confidence 45556789999999999999998999999999999988654
No 19
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=100.00 E-value=1e-44 Score=351.05 Aligned_cols=318 Identities=31% Similarity=0.452 Sum_probs=256.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc------hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY------YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
+|+||||||+||||++|+++|+++|++|++++|+... .......... ....+++++.+|++|.+++.++++.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQE--LTGRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHH--HHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHh--ccCCceEEEECCCCCHHHHHHHHHh
Confidence 4789999999999999999999999999999986543 1121111111 1235789999999999999999985
Q ss_pred cCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCC-CChH
Q 042406 153 VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQP-ASLY 231 (424)
Q Consensus 153 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~-~~~Y 231 (424)
.++|+||||||.........+++..+++|+.|+.+++++|++.+++ +||++||.++||.....+++|+++. .| .+.|
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~SS~~~~g~~~~~~~~E~~~~-~p~~~~Y 157 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVK-NLVFSSSATVYGNPQYLPLDEAHPT-GGCTNPY 157 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGGCSCSSSSBCTTSCC-CCCSSHH
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCC-EEEEECcHHHhCCCCCCCcCCCCCC-CCCCCch
Confidence 5669999999987655455677889999999999999999998875 9999999999998777788888765 45 7899
Q ss_pred HHHHHHHHHHHHHHHHHhC--CcEEEEEeccccCCCC------C----CCCcHHHHHHHHH-cCCceeEEec---CCCCc
Q 042406 232 AATKKAGEAIAHAYNHIYG--LSITGLRFFTVYGPWG------R----PDMAYFFFTRDII-RGKRITVYEA---PDGAS 295 (424)
Q Consensus 232 ~~sK~~~e~~~~~~~~~~~--i~~~~vrp~~v~G~~~------~----~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~ 295 (424)
+.+|+++|.+++.++.+ + ++++++||+++|||+. . ...+++.+...+. .+.++.++.. ..+++
T Consensus 158 ~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 236 (348)
T 1ek6_A 158 GKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGT 236 (348)
T ss_dssp HHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred HHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCc
Confidence 99999999999999877 5 9999999999999952 1 1345566666666 5666776621 01567
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQ 375 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~ 375 (424)
+.++|+|++|+|++++.+++.+... ..+++||+++++++|+.|+++.+.+.+|.+.+....+. ...+..
T Consensus 237 ~~~~~i~v~Dva~a~~~~~~~~~~~----------~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~ 305 (348)
T 1ek6_A 237 GVRDYIHVVDLAKGHIAALRKLKEQ----------CGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR-REGDVA 305 (348)
T ss_dssp CEECEEEHHHHHHHHHHHHHHHTTT----------CCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECC-CTTCCS
T ss_pred eEEeeEEHHHHHHHHHHHHhccccc----------CCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCC-CCccch
Confidence 8899999999999999999875311 11279999999999999999999999998776655443 234455
Q ss_pred cccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 376 ~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
...+|++|++++|||+|+++++++|+++++|++++..
T Consensus 306 ~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~~~ 342 (348)
T 1ek6_A 306 ACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQNPS 342 (348)
T ss_dssp EECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred hhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhccc
Confidence 6779999999999999999999999999999987643
No 20
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=100.00 E-value=1e-44 Score=351.07 Aligned_cols=306 Identities=22% Similarity=0.329 Sum_probs=255.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+|+||||||+||||++|+++|+++ |++|++++|+....... ........+++++.+|++|.+++.++++++ |
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d 77 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKA----NLEAILGDRVELVVGDIADAELVDKLAAKA--D 77 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGG----GTGGGCSSSEEEEECCTTCHHHHHHHHTTC--S
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChh----HHhhhccCCeEEEECCCCCHHHHHHHhhcC--C
Confidence 579999999999999999999999 89999999965321110 111122368999999999999999999987 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCC------------CCCCCCCCC
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKK------------VPFSEKDRT 224 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~------------~~~~e~~~~ 224 (424)
+||||||.........+++..+++|+.|+.+++++|.+.++ +||++||.++||.... .+++|+++.
T Consensus 78 ~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~--~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~ 155 (348)
T 1oc2_A 78 AIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI--RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNY 155 (348)
T ss_dssp EEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC--EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCC
T ss_pred EEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC--eEEEecccceeCCCcccccccccccccCCCcCCCCCC
Confidence 99999998765555667889999999999999999999875 9999999999986532 567777655
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHH
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYID 304 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 304 (424)
.+.+.|+.+|+++|.+++.++.++|++++++||+.||||+.....++..++..+..+.++.++ ++++..++|+|++
T Consensus 156 -~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~ 231 (348)
T 1oc2_A 156 -NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLY---GEGKNVRDWIHTN 231 (348)
T ss_dssp -CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEE---TTSCCEEECEEHH
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEe---cCCCceEeeEEHH
Confidence 678999999999999999999888999999999999999876556677788888888888776 5778899999999
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccc-cccccCCCCCCcccccCChHH
Q 042406 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE-TKVLPLPRNGDVQFTHANISL 383 (424)
Q Consensus 305 Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~d~s~ 383 (424)
|+|++++.+++... .+++||+++++++|+.|+++.+.+.+|.+.. +...+ .+........+|++|
T Consensus 232 Dva~~~~~~~~~~~-------------~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~d~~k 297 (348)
T 1oc2_A 232 DHSTGVWAILTKGR-------------MGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVT-DRAGHDLRYAIDASK 297 (348)
T ss_dssp HHHHHHHHHHHHCC-------------TTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEEC-CCTTCCCBCCBCCHH
T ss_pred HHHHHHHHHhhCCC-------------CCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCC-CCCCcccccccCHHH
Confidence 99999999987542 1279999999999999999999999998753 22222 223333456789999
Q ss_pred HHhHcCCcccCC-HHHHHHHHHHHHHHH
Q 042406 384 AQRELGYMPTTD-LETGLKKFVRWYLSY 410 (424)
Q Consensus 384 ~~~~LG~~p~~~-l~~~l~~~v~~~~~~ 410 (424)
+++.|||+|+++ ++++|+++++|++++
T Consensus 298 ~~~~lG~~p~~~~~~~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 298 LRDELGWTPQFTDFSEGLEETIQWYTDN 325 (348)
T ss_dssp HHHHHCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred HHHHcCCCCCCCcHHHHHHHHHHHHHHh
Confidence 999999999988 999999999999875
No 21
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=100.00 E-value=8.5e-46 Score=360.86 Aligned_cols=311 Identities=26% Similarity=0.393 Sum_probs=252.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHh--CCCeEEEEeCCCCchhhhHHH----HHhhhhccCCeEEEEccCCCHHHHHH
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKK--RGDGVLGLDNFNNYYETSLKK----ARKGLLERAGVFVIDADINDKSLLDK 148 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~~v~~~~~Dl~d~~~v~~ 148 (424)
+.+++|+||||||+||||++|+++|++ +|++|++++|+.+........ .........++.++.+|++|.+++.+
T Consensus 6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 85 (362)
T 3sxp_A 6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR 85 (362)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence 356789999999999999999999999 999999999966421100000 00111234578999999999999999
Q ss_pred H-hhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCC
Q 042406 149 I-FNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 149 ~-~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~ 227 (424)
+ .. ++|+||||||... ....+++..+++|+.|+.+++++|++.++ +||++||+++||.... +++|+++. .|
T Consensus 86 ~~~~--~~D~vih~A~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~--~~V~~SS~~vyg~~~~-~~~E~~~~-~p 157 (362)
T 3sxp_A 86 LEKL--HFDYLFHQAAVSD--TTMLNQELVMKTNYQAFLNLLEIARSKKA--KVIYASSAGVYGNTKA-PNVVGKNE-SP 157 (362)
T ss_dssp HTTS--CCSEEEECCCCCG--GGCCCHHHHHHHHTHHHHHHHHHHHHTTC--EEEEEEEGGGGCSCCS-SBCTTSCC-CC
T ss_pred hhcc--CCCEEEECCccCC--ccccCHHHHHHHHHHHHHHHHHHHHHcCC--cEEEeCcHHHhCCCCC-CCCCCCCC-CC
Confidence 8 54 5599999999744 35677889999999999999999999885 4999999999998766 88888866 78
Q ss_pred CChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC----CcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 228 ASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD----MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
.+.|+.||+++|.+++.++.+ +++++|||++||||+.... .++..++..+..+.++.++ +++++.++|+|+
T Consensus 158 ~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~i~v 232 (362)
T 3sxp_A 158 ENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLF---EFGEQLRDFVYI 232 (362)
T ss_dssp SSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECS---GGGCCEEECEEH
T ss_pred CChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEE---CCCCeEEccEEH
Confidence 899999999999999998765 8999999999999987543 5677888888888887765 567889999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHH
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISL 383 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~ 383 (424)
+|+|++++.+++.+. . ++||+++++++|+.|+++.+.+.+| +.++...|.+...+.....+|++|
T Consensus 233 ~Dva~ai~~~~~~~~-------------~-g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~~~~~~~~~~d~~k 297 (362)
T 3sxp_A 233 EDVIQANVKAMKAQK-------------S-GVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPYAFFQKHTQAHIEP 297 (362)
T ss_dssp HHHHHHHHHHTTCSS-------------C-EEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC-------CCCCBCCHH
T ss_pred HHHHHHHHHHHhcCC-------------C-CEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCCcCcccceecCHHH
Confidence 999999999998643 2 4999999999999999999999999 766665554424455667899999
Q ss_pred HHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 384 AQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
+++.|||+|.++++++|+++++|+++.++.
T Consensus 298 ~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~ 327 (362)
T 3sxp_A 298 TILDLDYTPLYDLESGIKDYLPHIHAIFKG 327 (362)
T ss_dssp HHHHHCCCCCCCHHHHHHHHHHHHTCC---
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999887654
No 22
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=100.00 E-value=1.1e-44 Score=357.17 Aligned_cols=324 Identities=21% Similarity=0.343 Sum_probs=254.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHH-hCCCeEEEEeCCCCch--------hhhHHHHHhhhhc---cCC---eEEEEccCCCH
Q 042406 79 GLTVLVTGAAGFVGSHVSLALK-KRGDGVLGLDNFNNYY--------ETSLKKARKGLLE---RAG---VFVIDADINDK 143 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~-~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~---~~~---v~~~~~Dl~d~ 143 (424)
+|+||||||+||||++|+++|+ ++|++|++++|+.... ............. ..+ +.++.+|++|.
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 5799999999999999999999 9999999999976432 1111110111111 124 89999999999
Q ss_pred HHHHHHhhccC-ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCC-------C
Q 042406 144 SLLDKIFNVVA-FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNK-------K 215 (424)
Q Consensus 144 ~~v~~~~~~~~-~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~-------~ 215 (424)
+++.++++..+ +|+||||||.........+++..+++|+.|+.+++++|++.+++ +||++||.++|+... .
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCD-KIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCC-EEEEECCHHHhCCCCcccccccc
Confidence 99999998554 79999999987655455678889999999999999999998875 999999999998765 5
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC---------CCCcHHHHH----HHHHcC
Q 042406 216 VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR---------PDMAYFFFT----RDIIRG 282 (424)
Q Consensus 216 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~---------~~~~~~~~~----~~~~~~ 282 (424)
.+++|+++. .|.+.|+.||+++|.+++.++.+++++++++||++||||+.. ...+++.++ ..+..+
T Consensus 161 ~~~~E~~~~-~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 239 (397)
T 1gy8_A 161 EPIDINAKK-SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPD 239 (397)
T ss_dssp CCBCTTSCC-BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC
T ss_pred cCcCccCCC-CCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHHHhc
Confidence 678888765 778999999999999999999888999999999999999632 233444444 244444
Q ss_pred C------------ceeEEec---CCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCc---ceEEcCCCCcc
Q 042406 283 K------------RITVYEA---PDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEF---RIFNLGNTTPV 344 (424)
Q Consensus 283 ~------------~~~~~~~---~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~ 344 (424)
. ++.++.. .+++++.++|||++|+|++++.+++.+..... ...+ ++||+++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~-------~~~~~~~~~~ni~~~~~~ 312 (397)
T 1gy8_A 240 QRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGP-------NDKSKYFSVFNLGTSRGY 312 (397)
T ss_dssp -----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCT-------TTGGGSEEEEEESCSCCE
T ss_pred CccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhccccccc-------ccccCCCcEEEeCCCCcc
Confidence 3 3555520 01567899999999999999999986542100 0012 69999999999
Q ss_pred cHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCcccC-CHHHHHHHHHHHHHHHhc
Q 042406 345 PVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTT-DLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 345 s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p~~-~l~~~l~~~v~~~~~~~~ 412 (424)
|+.|+++.+.+.+|.+.+....+. ...+.....+|++|+++.|||+|++ +++++|+++++|++++.+
T Consensus 313 s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~~~ 380 (397)
T 1gy8_A 313 SVREVIEVARKTTGHPIPVRECGR-REGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTHPN 380 (397)
T ss_dssp EHHHHHHHHHHHHCCCCCEEEECC-CTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTCTT
T ss_pred cHHHHHHHHHHHhCCCCCeeeCCC-CCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhccc
Confidence 999999999999998776655443 2344556789999999999999998 999999999999988744
No 23
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=100.00 E-value=3.5e-44 Score=345.99 Aligned_cols=319 Identities=25% Similarity=0.416 Sum_probs=251.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+||||++++++|+++|++|++++|............. .....++.++.+|++|.+++.+++++.++|+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi 78 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE--RLGGKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH--HHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHH--hhcCCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence 589999999999999999999999999999885433222211111 112346889999999999999999875679999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
||||.........+++..+++|+.|+.+++++|++.+++ +||++||.++||.....+++|+.+...+.+.|+.||+++|
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 157 (338)
T 1udb_A 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVK-NFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVE 157 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHH
T ss_pred ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHH
Confidence 999986554455677889999999999999999988875 9999999999997666677777765334789999999999
Q ss_pred HHHHHHHHHh-CCcEEEEEeccccCCCC------C----CCCcHHHHHHHHH-cCCceeEEec---CCCCccccccccHH
Q 042406 240 AIAHAYNHIY-GLSITGLRFFTVYGPWG------R----PDMAYFFFTRDII-RGKRITVYEA---PDGASVARDFTYID 304 (424)
Q Consensus 240 ~~~~~~~~~~-~i~~~~vrp~~v~G~~~------~----~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~i~v~ 304 (424)
.+++.++.++ +++++++||+++|||+. . ...+.+.+..... .+..+.++.. .+++++.++|||++
T Consensus 158 ~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~ 237 (338)
T 1udb_A 158 QILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVM 237 (338)
T ss_dssp HHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHH
T ss_pred HHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHH
Confidence 9999998876 89999999999999842 1 1234555554444 3445555521 12467889999999
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHH
Q 042406 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLA 384 (424)
Q Consensus 305 Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~ 384 (424)
|+|++++.+++..... ..+++||+++++++|+.|+++.+.+.+|.+.+....+. ...+.....+|++|+
T Consensus 238 Dva~a~~~~l~~~~~~----------~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~d~~k~ 306 (338)
T 1udb_A 238 DLADGHVVAMEKLANK----------PGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR-REGDLPAYWADASKA 306 (338)
T ss_dssp HHHHHHHHHHHHHTTC----------CEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECC-CTTCCSBCCBCCHHH
T ss_pred HHHHHHHHHHhhhhcc----------CCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCC-CCCchhhhhcCHHHH
Confidence 9999999998764211 11279999999999999999999999998766554443 234455677899999
Q ss_pred HhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 385 QRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 385 ~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
+++|||+|+++++++|+++++|++++..
T Consensus 307 ~~~lG~~p~~~l~~~l~~~~~w~~~~~~ 334 (338)
T 1udb_A 307 DRELNWRVTRTLDEMAQDTWHWQSRHPQ 334 (338)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred HHHcCCCcCCCHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999987643
No 24
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=100.00 E-value=3.7e-45 Score=358.30 Aligned_cols=308 Identities=23% Similarity=0.355 Sum_probs=249.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
.+++|+||||||+||||++|+++|+++| ++|++++|+.+...... ....+++++.+|++|.+++.++++++
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l-------~~~~~v~~~~~Dl~d~~~l~~~~~~~- 100 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINV-------PDHPAVRFSETSITDDALLASLQDEY- 100 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGS-------CCCTTEEEECSCTTCHHHHHHCCSCC-
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhc-------cCCCceEEEECCCCCHHHHHHHhhCC-
Confidence 3678999999999999999999999999 99999999754321110 01457899999999999999999855
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCcccCCCCCCCCC--CCCC--CC-CCC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS-DPQPAIVWASSSSVYGVNKKVPFS--EKDR--TD-QPA 228 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~--e~~~--~~-~~~ 228 (424)
|+|||+||.........+++..+++|+.++.+++++|++. +++ +||++||.++||.....+++ |+++ +. .|.
T Consensus 101 -d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~-~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~ 178 (377)
T 2q1s_A 101 -DYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLK-KVVYSAAGCSIAEKTFDDAKATEETDIVSLHNND 178 (377)
T ss_dssp -SEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCC-EEEEEEEC--------------CCCCCCCSSCCC
T ss_pred -CEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEeCCHHHcCCCCCCCcCcccccccccccCCC
Confidence 9999999987665556678899999999999999999998 765 99999999999976655677 7662 32 567
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCC---------CC----CCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWG---------RP----DMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~---------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
+.|+.+|+++|.+++.+++++|++++++||+.||||+. .. ..++..++..+..+.++.++ ++++
T Consensus 179 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---g~g~ 255 (377)
T 2q1s_A 179 SPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLE---NGGV 255 (377)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCS---GGGC
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEe---CCCC
Confidence 89999999999999999888899999999999999976 32 45677788888888877665 5678
Q ss_pred cccccccHHHHHHH-HHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCc
Q 042406 296 VARDFTYIDDIVKG-CLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDV 374 (424)
Q Consensus 296 ~~~~~i~v~Dva~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~ 374 (424)
..++|+|++|+|++ ++.+++.+. . ++||+++++++|+.|+++.+.+.+|.+.++...|. +..+.
T Consensus 256 ~~~~~i~v~Dva~a~i~~~~~~~~-------------~-g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~-~~~~~ 320 (377)
T 2q1s_A 256 ATRDFIFVEDVANGLIACAADGTP-------------G-GVYNIASGKETSIADLATKINEITGNNTELDRLPK-RPWDN 320 (377)
T ss_dssp CEECCEEHHHHHHHHHHHHHHCCT-------------T-EEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCC-CGGGC
T ss_pred eEEeeEEHHHHHHHHHHHHHhcCC-------------C-CeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCC-Ccccc
Confidence 89999999999999 999887642 2 49999999999999999999999998876655442 23334
Q ss_pred c-cccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHh
Q 042406 375 Q-FTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 375 ~-~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~ 411 (424)
. ...+|++|++++|||+|.++++++|+++++|+++..
T Consensus 321 ~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 358 (377)
T 2q1s_A 321 SGKRFGSPEKARRELGFSADVSIDDGLRKTIEWTKANL 358 (377)
T ss_dssp C-CCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHTH
T ss_pred ccccccCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHhh
Confidence 4 678999999999999999999999999999998864
No 25
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=100.00 E-value=3.3e-44 Score=354.57 Aligned_cols=321 Identities=23% Similarity=0.294 Sum_probs=251.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhh-------------HHHHH-hhhhccCCeEEEEccCCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-------------LKKAR-KGLLERAGVFVIDADIND 142 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------~~~~~-~~~~~~~~v~~~~~Dl~d 142 (424)
-.+++||||||+||||++|+++|+++|++|++++|........ ..... .......+++++.+|++|
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d 88 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICD 88 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTS
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCC
Confidence 3678999999999999999999999999999999854321100 00000 001124578999999999
Q ss_pred HHHHHHHhhccCccEEEEcccccCchhhccChH---HHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCC
Q 042406 143 KSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPN---SYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 143 ~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~---~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
.+++.+++++.++|+||||||.........+++ ..+++|+.|+.+++++|++.+.+++||++||.++||... .+++
T Consensus 89 ~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~-~~~~ 167 (404)
T 1i24_A 89 FEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPN-IDIE 167 (404)
T ss_dssp HHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCS-SCBC
T ss_pred HHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCC-CCCC
Confidence 999999999856699999999876554445554 488999999999999999988645999999999998654 3555
Q ss_pred CCC-------------CCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC-----------------C
Q 042406 220 EKD-------------RTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP-----------------D 269 (424)
Q Consensus 220 e~~-------------~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~-----------------~ 269 (424)
|+. .+..|.+.|+.||+++|.+++.++.++|+++++|||++||||+... .
T Consensus 168 E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~ 247 (404)
T 1i24_A 168 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 247 (404)
T ss_dssp SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred ccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccccchh
Confidence 541 1336778999999999999999988889999999999999997642 3
Q ss_pred CcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHH
Q 042406 270 MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRL 349 (424)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el 349 (424)
..+..++..+..+.++.++ +++++.++|+|++|+|++++.+++.+... ...++||+++ +++|+.|+
T Consensus 248 ~~~~~~~~~~~~g~~~~~~---g~g~~~~~~i~v~Dva~a~~~~l~~~~~~----------g~~~~yni~~-~~~s~~e~ 313 (404)
T 1i24_A 248 TALNRFCVQAAVGHPLTVY---GKGGQTRGYLDIRDTVQCVEIAIANPAKA----------GEFRVFNQFT-EQFSVNEL 313 (404)
T ss_dssp CHHHHHHHHHHHTCCEEEE---TTSCCEEEEEEHHHHHHHHHHHHHSCCCT----------TCEEEEEECS-EEEEHHHH
T ss_pred hHHHHHHHHHHcCCeeEEe---CCCCceECcEEHHHHHHHHHHHHhCcccC----------CCceEEEECC-CCCcHHHH
Confidence 4577788888999888776 67788999999999999999999865311 0116999998 88999999
Q ss_pred HHHHHHH---hCcccccccccCCCC-CCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 350 VSLLEKI---LKVKAETKVLPLPRN-GDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 350 ~~~i~~~---~g~~~~~~~~~~~~~-~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
++.+.+. +|.+.+....|.... .......+|++|++ +|||+|+++++++++++++|++.+.+.
T Consensus 314 ~~~i~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~d~~k~~-~LG~~p~~~~~~~l~~~~~~~~~~~~~ 380 (404)
T 1i24_A 314 ASLVTKAGSKLGLDVKKMTVPNPRVEAEEHYYNAKHTKLM-ELGLEPHYLSDSLLDSLLNFAVQFKDR 380 (404)
T ss_dssp HHHHHHHHHTTTCCCCEEEECCSSCSCSSCCCCBCCCHHH-HTTCCCCCCCHHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHhhCCCccccccCcccCccccceEecCHHHHH-HcCCCcCcCHHHHHHHHHHHHHhhhhc
Confidence 9999998 777765544443322 12334568999997 799999999999999999999876654
No 26
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=100.00 E-value=4e-44 Score=346.30 Aligned_cols=309 Identities=23% Similarity=0.345 Sum_probs=250.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-HHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-KSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~v~~~~~~~~~d~ 157 (424)
|+||||||+||||++|+++|+++ |++|++++|+.+.... .....+++++.+|++| .+.+.++++++ |+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~--d~ 70 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR--------FLNHPHFHFVEGDISIHSEWIEYHVKKC--DV 70 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG--------GTTCTTEEEEECCTTTCSHHHHHHHHHC--SE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH--------hhcCCCeEEEeccccCcHHHHHhhccCC--CE
Confidence 68999999999999999999998 8999999997643221 1123579999999998 46788888866 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC------CCCCChH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT------DQPASLY 231 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~------~~~~~~Y 231 (424)
||||||.........+++..+++|+.++.+++++|++.+ + +||++||.++||.....+++|+++. ..|.+.|
T Consensus 71 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y 148 (345)
T 2bll_A 71 VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIY 148 (345)
T ss_dssp EEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHH
T ss_pred EEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEEecHHHcCCCCCCCcCCcccccccCcccCccccc
Confidence 999999876544456778899999999999999999987 4 9999999999997766677777643 1344589
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC--------CCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 232 AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP--------DMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 232 ~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
+.+|+++|.+++.++++.|++++++||+.||||+... ...+..++..+..+.++.++ +++++.++|+|+
T Consensus 149 ~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~i~v 225 (345)
T 2bll_A 149 SVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI---DGGKQKRCFTDI 225 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEG---GGSCCEEECEEH
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEE---CCCCEEEEEEEH
Confidence 9999999999999988889999999999999997642 23456777788888887765 567789999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC-cccHHHHHHHHHHHhCcccccccccCCC------------
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT-PVPVSRLVSLLEKILKVKAETKVLPLPR------------ 370 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~------------ 370 (424)
+|+|++++.+++.+... ..+++||+++++ ++|+.|+++.+.+.+|.+......+...
T Consensus 226 ~Dva~a~~~~~~~~~~~----------~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 295 (345)
T 2bll_A 226 RDGIEALYRIIENAGNR----------CDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYG 295 (345)
T ss_dssp HHHHHHHHHHHHCGGGT----------TTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------
T ss_pred HHHHHHHHHHHhhcccc----------CCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhcc
Confidence 99999999999865321 123899999986 8999999999999998765433332210
Q ss_pred --CCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 371 --NGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 371 --~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
..+.....+|++|++++|||+|+++++++|+++++|++++.+.
T Consensus 296 ~~~~~~~~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~~ 340 (345)
T 2bll_A 296 KGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL 340 (345)
T ss_dssp -----CCCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSCT
T ss_pred ccccchhhhcccHHHHHHhcCCCccccHHHHHHHHHHHHHHcCCC
Confidence 0123456789999999999999999999999999999887543
No 27
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=100.00 E-value=3e-44 Score=349.51 Aligned_cols=309 Identities=27% Similarity=0.419 Sum_probs=253.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCch-hhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYY-ETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+||||||+||||++|+++|+++ |++|++++|+.... .... .......+++++.+|++|.+++.++++..++|+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 76 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL----SDISESNRYNFEHADICDSAEITRIFEQYQPDA 76 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG----TTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh----hhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCE
Confidence 57999999999999999999998 79999999965211 1111 111123578999999999999999998556699
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc--CCC------CeEEEecCCcccCCCCC--C--------CCC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS--DPQ------PAIVWASSSSVYGVNKK--V--------PFS 219 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~--~~~------~~~v~~SS~~vyg~~~~--~--------~~~ 219 (424)
||||||.........+++..+++|+.|+.+++++|.+. +++ .+||++||.++||.... . +++
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~ 156 (361)
T 1kew_A 77 VMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT 156 (361)
T ss_dssp EEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC
T ss_pred EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCC
Confidence 99999987655556778899999999999999999987 653 39999999999986532 1 677
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
|+++. .+.+.|+.||+++|.+++.++.++|+++++|||+.||||+.....++..++..+..+.++.++ ++++..++
T Consensus 157 E~~~~-~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 232 (361)
T 1kew_A 157 ETTAY-APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIY---GKGDQIRD 232 (361)
T ss_dssp TTSCC-CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEE---TTSCCEEE
T ss_pred CCCCC-CCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEc---CCCceeEe
Confidence 77655 778999999999999999999888999999999999999876555667778888888888776 57788999
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccc--------ccccCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAET--------KVLPLPRN 371 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~--------~~~~~~~~ 371 (424)
|+|++|+|++++.+++... .+++||+++++++|+.|+++.+.+.+|.+.+. ...+ .+.
T Consensus 233 ~i~v~Dva~a~~~~~~~~~-------------~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~-~~~ 298 (361)
T 1kew_A 233 WLYVEDHARALHMVVTEGK-------------AGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVA-DRP 298 (361)
T ss_dssp EEEHHHHHHHHHHHHHHCC-------------TTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEEC-CCT
T ss_pred eEEHHHHHHHHHHHHhCCC-------------CCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecC-CCC
Confidence 9999999999999987642 12799999999999999999999999876431 1111 122
Q ss_pred CCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHH
Q 042406 372 GDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 372 ~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~ 410 (424)
.......+|++|++++|||+|+++++++|+++++|++++
T Consensus 299 ~~~~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 299 GHDRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp TCCCBCCBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred cccceeecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence 333456789999999999999999999999999999875
No 28
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=100.00 E-value=7.6e-44 Score=344.23 Aligned_cols=315 Identities=22% Similarity=0.260 Sum_probs=254.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++|+||||||+||||++|+++|+++|++|++++|+.+...... . .......+++++.+|++|.+++.++++++++|+
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~--~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 78 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWR--L-KELGIENDVKIIHMDLLEFSNIIRTIEKVQPDE 78 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHH--H-HHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccccc--H-hhccccCceeEEECCCCCHHHHHHHHHhcCCCE
Confidence 5789999999999999999999999999999999775432211 1 111123478999999999999999999877899
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
||||||.........+++..+++|+.|+.+++++|.+.++.++||++||.++||.....+++|+.+. .+.+.|+.||++
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~-~~~~~Y~~sK~~ 157 (345)
T 2z1m_A 79 VYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPF-YPRSPYAVAKLF 157 (345)
T ss_dssp EEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCC-CCCSHHHHHHHH
T ss_pred EEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCC-CCCChhHHHHHH
Confidence 9999998766555677889999999999999999998876349999999999998777778887765 678999999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcH---HHHHHHHHcCCcee-EEecCCCCccccccccHHHHHHHHHHH
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAY---FFFTRDIIRGKRIT-VYEAPDGASVARDFTYIDDIVKGCLAG 313 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~v~Dva~a~~~~ 313 (424)
+|.+++.++.+++++++++|++++|||+...+... ..++..+..+.... .+ ++++..++|+|++|+|++++.+
T Consensus 158 ~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~Dva~a~~~~ 234 (345)
T 2z1m_A 158 GHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVL---GNLNAKRDWGYAPEYVEAMWLM 234 (345)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEE---SCTTCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeee---CCCCceeeeEEHHHHHHHHHHH
Confidence 99999999988899999999999999986544322 23344555665433 33 5677889999999999999999
Q ss_pred hhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccc-------------------cccC-CCCCC
Q 042406 314 LDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETK-------------------VLPL-PRNGD 373 (424)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-------------------~~~~-~~~~~ 373 (424)
++.+.. ++||+++++++|+.|+++.+.+.+|.+.++. ..+. .+..+
T Consensus 235 ~~~~~~--------------~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 300 (345)
T 2z1m_A 235 MQQPEP--------------DDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAE 300 (345)
T ss_dssp HTSSSC--------------CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSC
T ss_pred HhCCCC--------------ceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCC
Confidence 976431 6899999999999999999999999875432 0010 12233
Q ss_pred cccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 374 VQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 374 ~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
.....+|++|++++|||+|+++++++|+++++|+++....
T Consensus 301 ~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~~~ 340 (345)
T 2z1m_A 301 VDILVGNPEKAMKKLGWKPRTTFDELVEIMMEADLKRVRD 340 (345)
T ss_dssp CCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHC
T ss_pred cceeecCHHHHHHHcCCcccCCHHHHHHHHHHHHHHHhcc
Confidence 4456689999999999999999999999999999987654
No 29
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=100.00 E-value=7.2e-44 Score=349.41 Aligned_cols=305 Identities=25% Similarity=0.348 Sum_probs=253.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
..+|+||||||+||||++|+++|+++|++|++++|+.+.... ....+++++.+|++|.+++.++++++ |
T Consensus 27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~~v~~~~~Dl~d~~~~~~~~~~~--d 95 (379)
T 2c5a_A 27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT---------EDMFCDEFHLVDLRVMENCLKVTEGV--D 95 (379)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC---------GGGTCSEEEECCTTSHHHHHHHHTTC--S
T ss_pred ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchh---------hccCCceEEECCCCCHHHHHHHhCCC--C
Confidence 467899999999999999999999999999999997643211 11347899999999999999999865 9
Q ss_pred EEEEcccccCch-hhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCC-----CCCCCCCC-CCCCCC
Q 042406 157 HVMHLAAQAGVR-YAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKK-----VPFSEKDR-TDQPAS 229 (424)
Q Consensus 157 ~vi~~Ag~~~~~-~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~-----~~~~e~~~-~~~~~~ 229 (424)
+|||+|+..... ....+++..+++|+.++.+++++|++.+++ +||++||.++|+.... .+++|+++ +..+.+
T Consensus 96 ~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~-~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~ 174 (379)
T 2c5a_A 96 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIK-RFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD 174 (379)
T ss_dssp EEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCS-EEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSS
T ss_pred EEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCC
Confidence 999999976542 225677889999999999999999998875 9999999999985432 34556542 225678
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC----CcHHHHHHHHHcCCc-eeEEecCCCCccccccccHH
Q 042406 230 LYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD----MAYFFFTRDIIRGKR-ITVYEAPDGASVARDFTYID 304 (424)
Q Consensus 230 ~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~ 304 (424)
.|+.+|+++|.+++.+++++|+++++|||+.||||+.... ..+..++..+..+.+ +.++ +++++.++|+|++
T Consensus 175 ~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~g~~~~~~i~v~ 251 (379)
T 2c5a_A 175 AFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMW---GDGLQTRSFTFID 251 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEE---SCSCCEECCEEHH
T ss_pred hhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEe---CCCCeeEEEEEHH
Confidence 9999999999999999888899999999999999976432 256677878877776 6665 5778899999999
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHH
Q 042406 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLA 384 (424)
Q Consensus 305 Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~ 384 (424)
|+|++++.+++.+. +++||+++++++|+.|+++.+.+.+|.+.+....|.+ .+.....+|++|+
T Consensus 252 Dva~ai~~~l~~~~--------------~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--~~~~~~~~d~~k~ 315 (379)
T 2c5a_A 252 ECVEGVLRLTKSDF--------------REPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP--EGVRGRNSDNNLI 315 (379)
T ss_dssp HHHHHHHHHHHSSC--------------CSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCC--CCCSBCEECCHHH
T ss_pred HHHHHHHHHhhccC--------------CCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCC--CCcccccCCHHHH
Confidence 99999999997641 1689999999999999999999999988766655543 2334457899999
Q ss_pred HhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 385 QRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 385 ~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
+++|||+|+++++++|+++++|++++..
T Consensus 316 ~~~lG~~p~~~l~e~l~~~~~~~~~~~~ 343 (379)
T 2c5a_A 316 KEKLGWAPNMRLKEGLRITYFWIKEQIE 343 (379)
T ss_dssp HHHHSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCHHHHHHHHHHHHHHhHh
Confidence 9999999999999999999999988654
No 30
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=100.00 E-value=7.4e-44 Score=348.18 Aligned_cols=319 Identities=21% Similarity=0.236 Sum_probs=251.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchh-hhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE-TSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
||+||||||+||||++++++|+++|++|++++|+.+... .......... ....+++++.+|++|.+++.+++++.++|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 578999999999999999999999999999999654311 0011000000 01357899999999999999999987789
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCC--CeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ--PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
+||||||.........+++..+++|+.|+.+++++|++.++. ++||++||.++||.....+++|+++. .|.+.|+.|
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~-~~~~~Y~~s 159 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF-YPRSPYAVA 159 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC-CCCSHHHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC-CCCChHHHH
Confidence 999999986655556677889999999999999999998862 49999999999997766678888765 678999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCc---HHHHHHHHHcCCc-eeEEecCCCCccccccccHHHHHHHH
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMA---YFFFTRDIIRGKR-ITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
|+++|.+++.++.+++++++++|++.+|||+...+.. +..++..+..+.. ...+ +++++.++|+|++|+|+++
T Consensus 160 K~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~---g~~~~~~~~i~v~Dva~a~ 236 (372)
T 1db3_A 160 KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL---GNMDSLRDWGHAKDYVKMQ 236 (372)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEE---SCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceee---cCCCceeeeeEHHHHHHHH
Confidence 9999999999998889999999999999997654322 3345556666764 3333 6778899999999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccccc-------------------------
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKV------------------------- 365 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~------------------------- 365 (424)
+.+++.+. +++||+++++++|+.|+++.+.+.+|.+.++..
T Consensus 237 ~~~~~~~~--------------~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 302 (372)
T 1db3_A 237 WMMLQQEQ--------------PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDV 302 (372)
T ss_dssp HHTTSSSS--------------CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCE
T ss_pred HHHHhcCC--------------CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccc
Confidence 99987543 168999999999999999999999997654221
Q ss_pred ----ccC-CCCCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhccCC
Q 042406 366 ----LPL-PRNGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSAS 415 (424)
Q Consensus 366 ----~~~-~~~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~~~ 415 (424)
.+. .+..+.....+|++|++++|||+|+++++|+|+++++||++..+...
T Consensus 303 ~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~ 357 (372)
T 1db3_A 303 IIAVDPRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHS 357 (372)
T ss_dssp EEEECGGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTTC
T ss_pred eeeccccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhhhccc
Confidence 010 12333445678999999999999999999999999999999876544
No 31
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=100.00 E-value=1.3e-43 Score=346.93 Aligned_cols=318 Identities=20% Similarity=0.209 Sum_probs=253.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhh-HHHHHhhhh--ccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLL--ERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~--~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+||||||+||||++|+++|+++|++|++++|+.+..... ......... ...+++++.+|++|.+++.++++++++|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 104 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKPT 104 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCCC
Confidence 6899999999999999999999999999999976431110 000000000 2357899999999999999999987789
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCC--CeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ--PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~--~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
+||||||.........+++..+++|+.|+.+++++|++.++. ++||++||.++|+.....+++|+++. .|.+.|+.+
T Consensus 105 ~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~-~~~~~Y~~s 183 (375)
T 1t2a_A 105 EIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPF-YPRSPYGAA 183 (375)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC-CCCSHHHHH
T ss_pred EEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCC-CCCChhHHH
Confidence 999999987655456678889999999999999999998862 49999999999997766788888765 678999999
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCc---HHHHHHHHHcCCce-eEEecCCCCccccccccHHHHHHHH
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMA---YFFFTRDIIRGKRI-TVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
|+++|.+++.++.+++++++++||+.+|||+...+.. +..++..+..+... ..+ +++++.++|+|++|+|+++
T Consensus 184 K~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~---g~~~~~~~~i~v~Dva~a~ 260 (375)
T 1t2a_A 184 KLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSL---GNLDAKRDWGHAKDYVEAM 260 (375)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEE---SCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEe---CCCCceeeeEEHHHHHHHH
Confidence 9999999999998889999999999999997654332 23445556666543 333 5778899999999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccc-------------------cccC-CC
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETK-------------------VLPL-PR 370 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~-------------------~~~~-~~ 370 (424)
+.+++.+.. ++||+++++++|+.|+++.+.+.+|.+.++. ..+. .+
T Consensus 261 ~~~~~~~~~--------------~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 326 (375)
T 1t2a_A 261 WLMLQNDEP--------------EDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYR 326 (375)
T ss_dssp HHHHHSSSC--------------CCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSC
T ss_pred HHHHhcCCC--------------ceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCC
Confidence 999976431 6899999999999999999999999875422 0010 12
Q ss_pred CCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhccCC
Q 042406 371 NGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYNSAS 415 (424)
Q Consensus 371 ~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~~~ 415 (424)
..+.....+|++|++++|||+|+++++++|+++++|+++......
T Consensus 327 ~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~ 371 (375)
T 1t2a_A 327 PTEVDFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELMRTNP 371 (375)
T ss_dssp SSCCCBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHHC-
T ss_pred cccchhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhhccCC
Confidence 333445678999999999999999999999999999999876543
No 32
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=100.00 E-value=1.3e-44 Score=346.13 Aligned_cols=302 Identities=26% Similarity=0.396 Sum_probs=253.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+.+|+||||||+||||++|+++|+++|++|++++|+.+....... .........+++++.+|++ ++|
T Consensus 5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~------------~~d 71 (321)
T 3vps_A 5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPE-GTGKFLEKPVLELEERDLS------------DVR 71 (321)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCT-TSSEEECSCGGGCCHHHHT------------TEE
T ss_pred cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchh-hhhhhccCCCeeEEeCccc------------cCC
Confidence 457899999999999999999999999999999997652100000 0001112345666777766 559
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK 236 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~ 236 (424)
+|||+|+.........++...++ |+.++.+++++|++.+++ +|||+||.++|+.....+++|+++. .|.+.|+.+|+
T Consensus 72 ~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~-~~v~~SS~~v~~~~~~~~~~E~~~~-~p~~~Y~~sK~ 148 (321)
T 3vps_A 72 LVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVP-KVVVGSTCEVYGQADTLPTPEDSPL-SPRSPYAASKV 148 (321)
T ss_dssp EEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCC-EEEEEEEGGGGCSCSSSSBCTTSCC-CCCSHHHHHHH
T ss_pred EEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCC-eEEEecCHHHhCCCCCCCCCCCCCC-CCCChhHHHHH
Confidence 99999998877666677777788 999999999999999975 9999999999998877788888876 78899999999
Q ss_pred HHHHHHHHHHHHhCC-cEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhh
Q 042406 237 AGEAIAHAYNHIYGL-SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i-~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 315 (424)
++|.+++.+++++++ +++++||++||||+...+.++..++..+..+.++.++ ++++..++|+|++|+|++++.+++
T Consensus 149 ~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~v~Dva~~~~~~~~ 225 (321)
T 3vps_A 149 GLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVE---GDGEQRRDFTYITDVVDKLVALAN 225 (321)
T ss_dssp HHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEE---TTSCCEECEEEHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEe---CCCCceEceEEHHHHHHHHHHHHh
Confidence 999999999988899 9999999999999887777788889999999988887 678899999999999999999998
Q ss_pred hccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCcc-cC
Q 042406 316 TAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMP-TT 394 (424)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p-~~ 394 (424)
.+.. | +||+++++++|+.|+++.+. .+|.+.++...+.. ..+.....+|++|+++.|||+| .+
T Consensus 226 ~~~~-------------g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~-~~~~~~~~~d~~k~~~~lG~~p~~~ 289 (321)
T 3vps_A 226 RPLP-------------S-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPR-PNEITEFRADTALQTRQIGERSGGI 289 (321)
T ss_dssp SCCC-------------S-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCC-TTCCSBCCBCCHHHHHHHCCCSCCC
T ss_pred cCCC-------------C-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCC-CCCcceeeccHHHHHHHhCCCCCcC
Confidence 7541 3 99999999999999999999 99988877665543 4556677899999999999999 88
Q ss_pred CHHHHHHHHHHHHHHHhcc
Q 042406 395 DLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 395 ~l~~~l~~~v~~~~~~~~~ 413 (424)
+++++|+++++|++++...
T Consensus 290 ~~~~~l~~~~~~~~~~~~~ 308 (321)
T 3vps_A 290 GIEEGIRLTLEWWQSRDLD 308 (321)
T ss_dssp CHHHHHHHHHHHHHTSCTT
T ss_pred CHHHHHHHHHHHHHhCCCc
Confidence 9999999999999886543
No 33
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=100.00 E-value=5.4e-44 Score=342.14 Aligned_cols=303 Identities=20% Similarity=0.325 Sum_probs=246.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.+|+||||||+||||++|+++|+++|++|++++|+. .+|++|.+++.++++..++|+
T Consensus 2 ~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-----------------------~~D~~d~~~~~~~~~~~~~d~ 58 (321)
T 1e6u_A 2 AKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-----------------------ELNLLDSRAVHDFFASERIDQ 58 (321)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-----------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-----------------------cCCccCHHHHHHHHHhcCCCE
Confidence 357899999999999999999999999999988731 269999999999999556699
Q ss_pred EEEcccccCc-hhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC---CCCCC-ChHH
Q 042406 158 VMHLAAQAGV-RYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR---TDQPA-SLYA 232 (424)
Q Consensus 158 vi~~Ag~~~~-~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~---~~~~~-~~Y~ 232 (424)
|||+|+.... .....+++..+++|+.++.+++++|++.+++ +||++||.++||.....+++|+++ +..|. +.|+
T Consensus 59 vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~ 137 (321)
T 1e6u_A 59 VYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVN-KLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYA 137 (321)
T ss_dssp EEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHH
T ss_pred EEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-eEEEEccHHHcCCCCCCCcCccccccCCCCCCCCccH
Confidence 9999998652 3345677889999999999999999998875 999999999999876677888763 22443 5899
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC----CCcHHHHHHHHHc----C-CceeEEecCCCCccccccccH
Q 042406 233 ATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP----DMAYFFFTRDIIR----G-KRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 233 ~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~----~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~i~v 303 (424)
.+|+++|.+++.++++++++++++||+.||||+... ..++..++..+.. | .++.++ ++++..++|+|+
T Consensus 138 ~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~g~~~~~~i~v 214 (321)
T 1e6u_A 138 IAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVW---GSGTPMREFLHV 214 (321)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEE---SCSCCEECEEEH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEc---CCCCEEEEeEEH
Confidence 999999999999988889999999999999997753 2456667776654 3 566665 578889999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHH
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISL 383 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~ 383 (424)
+|+|++++.+++++...... .+...+++||+++++++|+.|+++.+.+.+|.+.++...+.. +.......+|++|
T Consensus 215 ~Dva~~~~~~~~~~~~~~~~----~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~~~~~~~~~d~~k 289 (321)
T 1e6u_A 215 DDMAAASIHVMELAHEVWLE----NTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK-PDGTPRKLLDVTR 289 (321)
T ss_dssp HHHHHHHHHHHHSCHHHHHH----TSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS-CCCCSBCCBCCHH
T ss_pred HHHHHHHHHHHhCccccccc----ccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCC-CCCcccccCCHHH
Confidence 99999999999876431000 000123799999999999999999999999987765554432 3345567899999
Q ss_pred HHhHcCCcccCCHHHHHHHHHHHHHHHhcc
Q 042406 384 AQRELGYMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
+++ |||+|+++++++|+++++|++++.+.
T Consensus 290 ~~~-lG~~p~~~~~~~l~~~~~~~~~~~~~ 318 (321)
T 1e6u_A 290 LHQ-LGWYHEISLEAGLASTYQWFLENQDR 318 (321)
T ss_dssp HHH-TTCCCCCCHHHHHHHHHHHHHHTC--
T ss_pred HHh-cCCccCCcHHHHHHHHHHHHHHHHHh
Confidence 999 99999999999999999999987653
No 34
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=100.00 E-value=2.8e-43 Score=340.55 Aligned_cols=307 Identities=27% Similarity=0.407 Sum_probs=250.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+++|+||||||+||||++|+++|+++|++|++++|+........ .......++.++.+|+.|.. +. ++
T Consensus 24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~D~~~~~-----~~--~~ 92 (343)
T 2b69_A 24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV----EHWIGHENFELINHDVVEPL-----YI--EV 92 (343)
T ss_dssp ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT----GGGTTCTTEEEEECCTTSCC-----CC--CC
T ss_pred ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhh----hhhccCCceEEEeCccCChh-----hc--CC
Confidence 467899999999999999999999999999999999654322111 11112357899999999853 34 45
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCC----CCCCCCChH
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKD----RTDQPASLY 231 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~----~~~~~~~~Y 231 (424)
|+|||+||.........+++..+++|+.|+.+++++|++.+. +||++||.++||.....+++|+. .+..+.+.|
T Consensus 93 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y 170 (343)
T 2b69_A 93 DQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA--RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACY 170 (343)
T ss_dssp SEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHH
T ss_pred CEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC--cEEEECcHHHhCCCCCCCCcccccccCCCCCCCCch
Confidence 999999998765545667888999999999999999999874 89999999999976666777763 133567889
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC--CCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHH
Q 042406 232 AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP--DMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKG 309 (424)
Q Consensus 232 ~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 309 (424)
+.+|+++|.+++.++++.+++++++||+.||||+... ...+..++..++.+.++.++ ++++..++|+|++|+|++
T Consensus 171 ~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~v~Dva~a 247 (343)
T 2b69_A 171 DEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVY---GSGSQTRAFQYVSDLVNG 247 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEE---SSSCCEEECEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEc---CCCCeEEeeEeHHHHHHH
Confidence 9999999999999988889999999999999997643 34566778888888888776 577889999999999999
Q ss_pred HHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcC
Q 042406 310 CLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELG 389 (424)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG 389 (424)
++.+++.+. +++||+++++++|+.|+++.+.+.+|.+.++...|.. ..+......|++|++++||
T Consensus 248 ~~~~~~~~~--------------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-~~~~~~~~~d~~k~~~~lG 312 (343)
T 2b69_A 248 LVALMNSNV--------------SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA-QDDPQKRKPDIKKAKLMLG 312 (343)
T ss_dssp HHHHHTSSC--------------CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCC-TTCCCCCCBCCHHHHHHHC
T ss_pred HHHHHhcCC--------------CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCC-CCCCceecCCHHHHHHHcC
Confidence 999887542 1689999999999999999999999988766555432 2334456789999999999
Q ss_pred CcccCCHHHHHHHHHHHHHHHhcc
Q 042406 390 YMPTTDLETGLKKFVRWYLSYYNS 413 (424)
Q Consensus 390 ~~p~~~l~~~l~~~v~~~~~~~~~ 413 (424)
|+|.++++++|+++++|+++....
T Consensus 313 ~~p~~~l~e~l~~~~~~~~~~~~~ 336 (343)
T 2b69_A 313 WEPVVPLEEGLNKAIHYFRKELEY 336 (343)
T ss_dssp CCCCSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987654
No 35
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=100.00 E-value=3.1e-43 Score=331.56 Aligned_cols=278 Identities=18% Similarity=0.208 Sum_probs=240.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+||||++++++|+++|++|++++|. ++|++|.+++.+++++.++|+||
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~D~~d~~~~~~~~~~~~~d~vi 61 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK------------------------LLDITNISQVQQVVQEIRPHIII 61 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT------------------------TSCTTCHHHHHHHHHHHCCSEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc------------------------ccCCCCHHHHHHHHHhcCCCEEE
Confidence 389999999999999999999999999999981 27999999999999976779999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
|+||.........+++..+++|+.++.+++++|++.+. +|||+||.++|+.....+++|+++. .|.+.|+.+|.++|
T Consensus 62 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~v~~SS~~vy~~~~~~~~~E~~~~-~p~~~Y~~sK~~~E 138 (287)
T 3sc6_A 62 HCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA--KLVYISTDYVFQGDRPEGYDEFHNP-APINIYGASKYAGE 138 (287)
T ss_dssp ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEEEGGGSCCCCSSCBCTTSCC-CCCSHHHHHHHHHH
T ss_pred ECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEchhhhcCCCCCCCCCCCCCC-CCCCHHHHHHHHHH
Confidence 99999877766788899999999999999999999886 7999999999998877889998876 78899999999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
.+++.+ ..+++++||+.||||+.. .++..++..+..+.++.++ +++.++|+|++|+|++++.+++++.
T Consensus 139 ~~~~~~----~~~~~ilR~~~v~G~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~v~Dva~~~~~~~~~~~- 206 (287)
T 3sc6_A 139 QFVKEL----HNKYFIVRTSWLYGKYGN--NFVKTMIRLGKEREEISVV-----ADQIGSPTYVADLNVMINKLIHTSL- 206 (287)
T ss_dssp HHHHHH----CSSEEEEEECSEECSSSC--CHHHHHHHHHTTCSEEEEE-----CSCEECCEEHHHHHHHHHHHHTSCC-
T ss_pred HHHHHh----CCCcEEEeeeeecCCCCC--cHHHHHHHHHHcCCCeEee-----cCcccCceEHHHHHHHHHHHHhCCC-
Confidence 999887 447899999999999653 4566777777778888775 3478999999999999999998754
Q ss_pred cCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccC----CCCCCcccccCChHHHHhHcCCcccCC
Q 042406 320 STGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPL----PRNGDVQFTHANISLAQRELGYMPTTD 395 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----~~~~~~~~~~~d~s~~~~~LG~~p~~~ 395 (424)
+++||+++++++|+.|+++.+.+.+|.+..+...+. ....+.....+|++|++ .|||.|.++
T Consensus 207 -------------~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~-~lg~~p~~~ 272 (287)
T 3sc6_A 207 -------------YGTYHVSNTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAAARPKYSIFQHNMLR-LNGFLQMPS 272 (287)
T ss_dssp -------------CEEEECCCBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSSCCCSBCCBCCHHHH-HTTCCCCCB
T ss_pred -------------CCeEEEcCCCcccHHHHHHHHHHHcCCCcceeeeehhhcCcccCCCCcccccHHHHH-hhCCCCCcc
Confidence 179999999999999999999999998876654432 22344456789999999 899999999
Q ss_pred HHHHHHHHHHHHHHH
Q 042406 396 LETGLKKFVRWYLSY 410 (424)
Q Consensus 396 l~~~l~~~v~~~~~~ 410 (424)
++++|+++++|++++
T Consensus 273 ~~~~l~~~~~~~~~~ 287 (287)
T 3sc6_A 273 WEEGLERFFIETKSH 287 (287)
T ss_dssp HHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhcC
Confidence 999999999998653
No 36
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=100.00 E-value=1.4e-42 Score=340.46 Aligned_cols=315 Identities=23% Similarity=0.239 Sum_probs=249.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhh-HHHHHhhh-hccC-CeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGL-LERA-GVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~-~~~~-~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+||||||+||||++|++.|+++|++|++++|+.+..... ........ .... ++.++.+|++|.+++.++++++++|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 6899999999999999999999999999999976531100 00000000 0112 7899999999999999999987789
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCC----CeEEEecCCcccCCCCCCCCCCCCCCCCCCChHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ----PAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYA 232 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~----~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~ 232 (424)
+||||||.........+++..+++|+.|+.+++++|++.+++ .+||++||.++||.... +++|+++. .|.+.|+
T Consensus 109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~-~~~E~~~~-~~~~~Y~ 186 (381)
T 1n7h_A 109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPP-PQSETTPF-HPRSPYA 186 (381)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCS-SBCTTSCC-CCCSHHH
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCC-CCCCCCCC-CCCCchH
Confidence 999999987665556678899999999999999999886532 39999999999997665 88888765 7789999
Q ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCc---HHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHH
Q 042406 233 ATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMA---YFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKG 309 (424)
Q Consensus 233 ~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 309 (424)
.+|+++|.+++.++.+++++++++|++++|||+...+.. +..++..+..+....+.. ++++..++|+|++|+|++
T Consensus 187 ~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~--g~~~~~~~~v~v~Dva~a 264 (381)
T 1n7h_A 187 ASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFL--GNLQASRDWGFAGDYVEA 264 (381)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEE--SCTTCEEECEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEe--CCCCceeeeEEHHHHHHH
Confidence 999999999999998889999999999999997654332 233455566665433221 567889999999999999
Q ss_pred HHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccc--cccccC-CCCCCcccccCChHHHHh
Q 042406 310 CLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE--TKVLPL-PRNGDVQFTHANISLAQR 386 (424)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~-~~~~~~~~~~~d~s~~~~ 386 (424)
++.+++.+.. ++||+++++++|+.|+++.+.+.+|.+.. ....+. .++.+.....+|++|+++
T Consensus 265 ~~~~~~~~~~--------------~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~ 330 (381)
T 1n7h_A 265 MWLMLQQEKP--------------DDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKE 330 (381)
T ss_dssp HHHHHTSSSC--------------CEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHH
T ss_pred HHHHHhCCCC--------------CeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHH
Confidence 9999976431 69999999999999999999999997642 111111 123344556789999999
Q ss_pred HcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 387 ELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 387 ~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
.|||+|+++++++|+++++||++...
T Consensus 331 ~lG~~p~~~l~e~l~~~~~~~~~~~~ 356 (381)
T 1n7h_A 331 VLGWKPQVGFEKLVKMMVDEDLELAK 356 (381)
T ss_dssp HHCCCCCSCHHHHHHHHHHHHHHHHH
T ss_pred hcCCcccCCHHHHHHHHHHHHHhhcc
Confidence 99999988999999999999988654
No 37
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=100.00 E-value=8.2e-43 Score=335.51 Aligned_cols=298 Identities=20% Similarity=0.311 Sum_probs=238.6
Q ss_pred CCCCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 72 TRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 72 ~~~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
..+..+++|+||||||+||||++|+++|+++|++|++++|+....... ... ..++.++.+|++|.+++.++++
T Consensus 13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~--l~~v~~~~~Dl~d~~~~~~~~~ 85 (330)
T 2pzm_A 13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREV-----LPP--VAGLSVIEGSVTDAGLLERAFD 85 (330)
T ss_dssp -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGG-----SCS--CTTEEEEECCTTCHHHHHHHHH
T ss_pred CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhh-----hhc--cCCceEEEeeCCCHHHHHHHHh
Confidence 345668899999999999999999999999999999999965432110 011 1478999999999999999998
Q ss_pred ccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCC--CCCCCCCCCCCCC
Q 042406 152 VVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKV--PFSEKDRTDQPAS 229 (424)
Q Consensus 152 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~--~~~e~~~~~~~~~ 229 (424)
..++|+||||||..... ...+++ +++|+.++.+++++|.+.+++ +||++||.++|+..... +++|++ .+.+
T Consensus 86 ~~~~D~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~-~iV~~SS~~~~~~~~~~~~~~~E~~---~~~~ 158 (330)
T 2pzm_A 86 SFKPTHVVHSAAAYKDP-DDWAED--AATNVQGSINVAKAASKAGVK-RLLNFQTALCYGRPATVPIPIDSPT---APFT 158 (330)
T ss_dssp HHCCSEEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHHTCS-EEEEEEEGGGGCSCSSSSBCTTCCC---CCCS
T ss_pred hcCCCEEEECCccCCCc-cccChh--HHHHHHHHHHHHHHHHHcCCC-EEEEecCHHHhCCCccCCCCcCCCC---CCCC
Confidence 54559999999986542 222333 899999999999999988865 99999999999865443 677765 5678
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHH-
Q 042406 230 LYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK- 308 (424)
Q Consensus 230 ~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~- 308 (424)
.|+.+|+++|.+++.+ ++++++|||+++|||+. ...++..++..+..+. .++ +++. .++++|++|+|+
T Consensus 159 ~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~-~~~~~~~~~~~~~~~~--~~~---~~~~-~~~~i~~~Dva~~ 227 (330)
T 2pzm_A 159 SYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRL-AIGPIPTFYKRLKAGQ--KCF---CSDT-VRDFLDMSDFLAI 227 (330)
T ss_dssp HHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTC-CSSHHHHHHHHHHTTC--CCC---EESC-EECEEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCC-CCCHHHHHHHHHHcCC--EEe---CCCC-EecceeHHHHHHH
Confidence 9999999999998876 89999999999999986 3445566677777665 222 3445 789999999999
Q ss_pred HHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHH----
Q 042406 309 GCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLA---- 384 (424)
Q Consensus 309 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~---- 384 (424)
+++.+++.+. +++||+++++++|+.|+++.+.+.+|.+ .+...+... +.....+|++|+
T Consensus 228 a~~~~~~~~~--------------g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~--~~~~~~~d~~k~~~~~ 290 (330)
T 2pzm_A 228 ADLSLQEGRP--------------TGVFNVSTGEGHSIKEVFDVVLDYVGAT-LAEPVPVVA--PGADDVPSVVLDPSKT 290 (330)
T ss_dssp HHHHTSTTCC--------------CEEEEESCSCCEEHHHHHHHHHHHHTCC-CSSCCCEEC--CCTTSCSEECBCCHHH
T ss_pred HHHHHhhcCC--------------CCEEEeCCCCCCCHHHHHHHHHHHhCCC-CceeCCCCc--chhhccCCHHHHhhch
Confidence 9999887632 2899999999999999999999999987 444433221 445567888888
Q ss_pred -HhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 385 -QRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 385 -~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
++ |||+|.++++++|+++++|++++..
T Consensus 291 l~~-lG~~p~~~~~~~l~~~~~~~~~~~~ 318 (330)
T 2pzm_A 291 ETE-FGWKAKVDFKDTITGQLAWYDKYGV 318 (330)
T ss_dssp HHH-HCCCCCCCHHHHHHHHHHHHHHHCS
T ss_pred HHH-cCCcccCCHHHHHHHHHHHHHhhCc
Confidence 77 9999998999999999999987643
No 38
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3.4e-42 Score=332.45 Aligned_cols=292 Identities=16% Similarity=0.155 Sum_probs=232.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.+|+||||||+||||++|+++|+++|++|++++|+.+.... +...+++++.+|++|.+++.++++++ |+
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------l~~~~~~~~~~Dl~d~~~~~~~~~~~--d~ 80 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR---------LAYLEPECRVAEMLDHAGLERALRGL--DG 80 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG---------GGGGCCEEEECCTTCHHHHHHHTTTC--SE
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh---------hccCCeEEEEecCCCHHHHHHHHcCC--CE
Confidence 45799999999999999999999999999999997653221 11237899999999999999999965 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCC--CCCCCCCCCCCC----CChH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKK--VPFSEKDRTDQP----ASLY 231 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~--~~~~e~~~~~~~----~~~Y 231 (424)
|||+||... ....+++..+++|+.++.+++++|++.+++ +||++||.++|+.... .+ +|+++. .| .+.|
T Consensus 81 vih~a~~~~--~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~SS~~~~~~~~~~~~~-~E~~~~-~p~~~~~~~Y 155 (342)
T 2x4g_A 81 VIFSAGYYP--SRPRRWQEEVASALGQTNPFYAACLQARVP-RILYVGSAYAMPRHPQGLPG-HEGLFY-DSLPSGKSSY 155 (342)
T ss_dssp EEEC--------------CHHHHHHHHHHHHHHHHHHHTCS-CEEEECCGGGSCCCTTSSCB-CTTCCC-SSCCTTSCHH
T ss_pred EEECCccCc--CCCCCHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEECCHHhhCcCCCCCCC-CCCCCC-CccccccChH
Confidence 999999754 234566789999999999999999998875 9999999999986544 34 666655 66 7899
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCC-CCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHH
Q 042406 232 AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWG-RPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 232 ~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
+.+|+++|.+++.+++. |+++++|||+.||||+. ... +..++..+..+....+ ++..++|+|++|+|+++
T Consensus 156 ~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~------~~~~~~~i~v~Dva~~~ 226 (342)
T 2x4g_A 156 VLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHY------VAGQRNVIDAAEAGRGL 226 (342)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEE------ECCEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccc------cCCCcceeeHHHHHHHH
Confidence 99999999999999877 99999999999999976 322 4456777777776544 35678999999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCC----------------C----
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP----------------R---- 370 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~----------------~---- 370 (424)
+.+++.+.. +++||+++++ +|+.|+++.+.+.+|.+... ..|.. .
T Consensus 227 ~~~~~~~~~-------------g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~ 291 (342)
T 2x4g_A 227 LMALERGRI-------------GERYLLTGHN-LEMADLTRRIAELLGQPAPQ-PMSMAMARALATLGRLRYRVSGQLPL 291 (342)
T ss_dssp HHHHHHSCT-------------TCEEEECCEE-EEHHHHHHHHHHHHTCCCCE-EECHHHHHHHHHHHHC----------
T ss_pred HHHHhCCCC-------------CceEEEcCCc-ccHHHHHHHHHHHhCCCCCC-cCCHHHHHHHHHHHHHHHHhhCCCCC
Confidence 999987542 2799999999 99999999999999987654 33211 0
Q ss_pred -CCC-----cccccCChHHHHhHcCC-cccCCHHHHHHHHHHHHHHH
Q 042406 371 -NGD-----VQFTHANISLAQRELGY-MPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 371 -~~~-----~~~~~~d~s~~~~~LG~-~p~~~l~~~l~~~v~~~~~~ 410 (424)
..+ .....+|++|+++.||| +| ++++++|+++++|++++
T Consensus 292 ~~~~~~~~~~~~~~~d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~ 337 (342)
T 2x4g_A 292 LDETAIEVMAGGQFLDGRKAREELGFFST-TALDDTLLRAIDWFRDN 337 (342)
T ss_dssp ------CCTTCCCCBCCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHhcCcccChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHc
Confidence 001 23467899999999999 99 79999999999999875
No 39
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=100.00 E-value=1.6e-42 Score=330.41 Aligned_cols=301 Identities=19% Similarity=0.276 Sum_probs=236.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+|+||||||+||||++|+++|+++ |++|++++|+..... . ..+++++.+|++|.+++.+++++.++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~------~~~~~~~~~D~~d~~~~~~~~~~~~~d 70 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----V------VNSGPFEVVNALDFNQIEHLVEVHKIT 70 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----H------HHSSCEEECCTTCHHHHHHHHHHTTCC
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----c------cCCCceEEecCCCHHHHHHHHhhcCCC
Confidence 478999999999999999999999 899999999765311 0 125778999999999999999866679
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCC-CCCCCCCCCCCCCChHHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKK-VPFSEKDRTDQPASLYAATK 235 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~-~~~~e~~~~~~~~~~Y~~sK 235 (424)
+|||+||.... ....+++..+++|+.++.+++++|++.+++ +||++||.++|+.... .+.+|+.+. .|.+.|+.+|
T Consensus 71 ~vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~e~~~~-~~~~~Y~~sK 147 (312)
T 2yy7_A 71 DIYLMAALLSA-TAEKNPAFAWDLNMNSLFHVLNLAKAKKIK-KIFWPSSIAVFGPTTPKENTPQYTIM-EPSTVYGISK 147 (312)
T ss_dssp EEEECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHTTSCS-EEECCEEGGGCCTTSCSSSBCSSCBC-CCCSHHHHHH
T ss_pred EEEECCccCCC-chhhChHHHHHHHHHHHHHHHHHHHHcCCC-EEEEeccHHHhCCCCCCCCccccCcC-CCCchhHHHH
Confidence 99999997543 234677889999999999999999998875 9999999999987443 455565544 7789999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC-----CcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHH
Q 042406 236 KAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD-----MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGC 310 (424)
Q Consensus 236 ~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~ 310 (424)
+++|.+++.+++++|++++++||+.+|||+..+. .....+.. .+.++++..+ ++++..++|+|++|+|+++
T Consensus 148 ~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~i~v~Dva~a~ 223 (312)
T 2yy7_A 148 QAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYK-AIADKKYECF---LSSETKMPMMYMDDAIDAT 223 (312)
T ss_dssp HHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHH-HHHTSEEEES---SCTTCCEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHH-HHcCCCeEEe---cCCCceeeeeeHHHHHHHH
Confidence 9999999999888899999999999999764322 13333433 3445555544 5678899999999999999
Q ss_pred HHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCC--CCcccccCChHHHHhHc
Q 042406 311 LAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN--GDVQFTHANISLAQREL 388 (424)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~--~~~~~~~~d~s~~~~~L 388 (424)
+.+++.+.... ..+++||+++ +.+|+.|+++.+.+.+|. ..+...+..+. .......+|++|++++|
T Consensus 224 ~~~~~~~~~~~---------~~~~~~ni~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~l 292 (312)
T 2yy7_A 224 INIMKAPVEKI---------KIHSSYNLAA-MSFTPTEIANEIKKHIPE-FTITYEPDFRQKIADSWPASIDDSQAREDW 292 (312)
T ss_dssp HHHHHSCGGGC---------CCSSCEECCS-EEECHHHHHHHHHTTCTT-CEEEECCCTHHHHHTTSCSSBCCHHHHHHH
T ss_pred HHHHhCccccc---------ccCceEEeCC-CccCHHHHHHHHHHHCCC-CceEeccCccccccccccccCCHHHHHHHc
Confidence 99998764310 0127999996 789999999999999983 22222221100 01112468999999999
Q ss_pred CCcccCCHHHHHHHHHHHHH
Q 042406 389 GYMPTTDLETGLKKFVRWYL 408 (424)
Q Consensus 389 G~~p~~~l~~~l~~~v~~~~ 408 (424)
||+|+++++++|+++++||+
T Consensus 293 G~~p~~~l~~~l~~~~~~~k 312 (312)
T 2yy7_A 293 DWKHTFDLESMTKDMIEHLS 312 (312)
T ss_dssp CCCCCCCHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHHHHhC
Confidence 99999999999999999974
No 40
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=100.00 E-value=2.6e-42 Score=327.15 Aligned_cols=286 Identities=16% Similarity=0.157 Sum_probs=238.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+||||++|+++|+ +|++|++++|+. .++.+|++|.+++.+++++.++|+||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~--------------------~~~~~D~~d~~~~~~~~~~~~~d~vi 59 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS--------------------KEFCGDFSNPKGVAETVRKLRPDVIV 59 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC--------------------SSSCCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc--------------------ccccccCCCHHHHHHHHHhcCCCEEE
Confidence 689999999999999999999 899999999843 13568999999999999985679999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
|+||.........+++..+++|+.++.+++++|++.++ +|||+||.++|+.....+++|+++. .|.+.|+.+|+++|
T Consensus 60 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~SS~~vy~~~~~~~~~E~~~~-~p~~~Y~~sK~~~E 136 (299)
T 1n2s_A 60 NAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA--WVVHYSTDYVFPGTGDIPWQETDAT-SPLNVYGKTKLAGE 136 (299)
T ss_dssp ECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC--EEEEEEEGGGSCCCTTCCBCTTSCC-CCSSHHHHHHHHHH
T ss_pred ECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--cEEEEecccEEeCCCCCCCCCCCCC-CCccHHHHHHHHHH
Confidence 99998766556678889999999999999999998875 7999999999998777788888766 77899999999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
.+++.+. .+++++||+++|||+.. .++..++..+..+.++.++ +++.++|+|++|+|++++.+++.+..
T Consensus 137 ~~~~~~~----~~~~ilRp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~v~Dva~~~~~~~~~~~~ 205 (299)
T 1n2s_A 137 KALQDNC----PKHLIFRTSWVYAGKGN--NFAKTMLRLAKERQTLSVI-----NDQYGAPTGAELLADCTAHAIRVALN 205 (299)
T ss_dssp HHHHHHC----SSEEEEEECSEECSSSC--CHHHHHHHHHHHCSEEEEE-----CSCEECCEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC----CCeEEEeeeeecCCCcC--cHHHHHHHHHhcCCCEEee-----cCcccCCeeHHHHHHHHHHHHHHhcc
Confidence 9998873 48999999999999754 4566777888888877765 24789999999999999999987631
Q ss_pred cCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccc------ccccccCC----CCCCcccccCChHHHHhHcC
Q 042406 320 STGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKA------ETKVLPLP----RNGDVQFTHANISLAQRELG 389 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~------~~~~~~~~----~~~~~~~~~~d~s~~~~~LG 389 (424)
.. ..+++||+++++++|+.|+++.+.+.+|.+. .+...+.. .........+|++|++++||
T Consensus 206 ~~---------~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG 276 (299)
T 1n2s_A 206 KP---------EVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFD 276 (299)
T ss_dssp CG---------GGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHT
T ss_pred cc---------ccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcC
Confidence 10 0128999999999999999999999999762 22222211 11233456799999999999
Q ss_pred CcccCCHHHHHHHHHHHHHHH
Q 042406 390 YMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 390 ~~p~~~l~~~l~~~v~~~~~~ 410 (424)
|+|+ +++++|+++++|+++.
T Consensus 277 ~~p~-~~~~~l~~~~~~~~~~ 296 (299)
T 1n2s_A 277 LILP-QWELGVKRMLTEMFTT 296 (299)
T ss_dssp CCCC-BHHHHHHHHHHHHHSC
T ss_pred CCCC-CHHHHHHHHHHHHHhc
Confidence 9998 8999999999999764
No 41
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=100.00 E-value=2.6e-42 Score=335.58 Aligned_cols=301 Identities=22% Similarity=0.372 Sum_probs=243.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.+++|+||||||+||||++|+++|+++| ++|++++|+...... ... .++. +.+|++|.+.+++++++.
T Consensus 43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-------~~~--~~~~-~~~d~~~~~~~~~~~~~~~ 112 (357)
T 2x6t_A 43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-------VNL--VDLN-IADYMDKEDFLIQIMAGEE 112 (357)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG-------GGT--TTSC-CSEEEEHHHHHHHHHTTCC
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh-------hcc--cCce-EeeecCcHHHHHHHHhhcc
Confidence 4567899999999999999999999999 999999997643210 001 1233 678999999999998752
Q ss_pred --CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChH
Q 042406 154 --AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLY 231 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y 231 (424)
++|+|||+||.... ...+++..+++|+.|+.+++++|++.++ +||++||.++||.....+++|+++. .|.+.|
T Consensus 113 ~~~~d~Vih~A~~~~~--~~~~~~~~~~~n~~~~~~ll~a~~~~~~--r~V~~SS~~v~g~~~~~~~~E~~~~-~p~~~Y 187 (357)
T 2x6t_A 113 FGDVEAIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGRTSDFIESREYE-KPLNVF 187 (357)
T ss_dssp CSSCCEEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEEEGGGGCSCSSCCCSSGGGC-CCSSHH
T ss_pred cCCCCEEEECCcccCC--ccCCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEcchHHhCCCCCCCcCCcCCC-CCCChh
Confidence 46999999998653 3567788999999999999999999876 8999999999998766678887755 778999
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC----CCcHHHHHHHHHcCCceeEEecCCCCcc-ccccccHHHH
Q 042406 232 AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP----DMAYFFFTRDIIRGKRITVYEAPDGASV-ARDFTYIDDI 306 (424)
Q Consensus 232 ~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dv 306 (424)
+.+|+++|.+++.++.++|+++++|||++||||+... ...+..++..+..+..+.++ ++++. .++|+|++|+
T Consensus 188 ~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~v~Dv 264 (357)
T 2x6t_A 188 GYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLF---EGSENFKRDFVYVGDV 264 (357)
T ss_dssp HHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEE---TTGGGCEECEEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEe---CCCCcceEccEEHHHH
Confidence 9999999999999988889999999999999997653 34566778888888887776 56778 8999999999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCC---CCcccccCChHH
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN---GDVQFTHANISL 383 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~d~s~ 383 (424)
|++++.+++.+. +++||+++++++|+.|+++.+.+.+|.+ .+...+.+.. ........|++|
T Consensus 265 a~ai~~~~~~~~--------------~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~k 329 (357)
T 2x6t_A 265 ADVNLWFLENGV--------------SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTN 329 (357)
T ss_dssp HHHHHHHHHHCC--------------CEEEEESCSCCEEHHHHHHHHHHHHTCC-CCEEECCCGGGTTSCCSBCCCCCHH
T ss_pred HHHHHHHHhcCC--------------CCeEEecCCCcccHHHHHHHHHHHcCCC-CceecCCCcccccccccccccCHHH
Confidence 999999998754 1799999999999999999999999987 3333333321 112345688999
Q ss_pred HHhHcCC-cccCCHHHHHHHHHHHHHHH
Q 042406 384 AQRELGY-MPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 384 ~~~~LG~-~p~~~l~~~l~~~v~~~~~~ 410 (424)
+++ ||| .|.++++++|+++++|+++.
T Consensus 330 ~~~-lG~~~~~~~l~e~l~~~~~~~~~~ 356 (357)
T 2x6t_A 330 LRA-AGYDKPFKTVAEGVTEYMAWLNRD 356 (357)
T ss_dssp HHH-TTCCCCCCCHHHHHHHHHHHHC--
T ss_pred HHH-cCCCCCCCCHHHHHHHHHHHHhhc
Confidence 976 999 78889999999999999753
No 42
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=100.00 E-value=5.2e-42 Score=330.33 Aligned_cols=295 Identities=21% Similarity=0.319 Sum_probs=234.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
....++|+||||||+||||++|+++|+++|++|++++|+........ . ...++.++.+|++|.+++.+++++.
T Consensus 16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l-----~--~~~~~~~~~~Dl~d~~~~~~~~~~~ 88 (333)
T 2q1w_A 16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHL-----K--DHPNLTFVEGSIADHALVNQLIGDL 88 (333)
T ss_dssp -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGS-----C--CCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhH-----h--hcCCceEEEEeCCCHHHHHHHHhcc
Confidence 34567899999999999999999999999999999999754221110 0 1147899999999999999999884
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC----CCCCCCCCCCCCCCCCC-
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG----VNKKVPFSEKDRTDQPA- 228 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg----~~~~~~~~e~~~~~~~~- 228 (424)
++|+||||||..... ...+++ +++|+.++.+++++|.+.+++ +||++||.++|+ .... +++|++ .|.
T Consensus 89 ~~D~vih~A~~~~~~-~~~~~~--~~~N~~~~~~l~~a~~~~~~~-~iV~~SS~~~~g~~~~~~~~-~~~E~~---~p~~ 160 (333)
T 2q1w_A 89 QPDAVVHTAASYKDP-DDWYND--TLTNCVGGSNVVQAAKKNNVG-RFVYFQTALCYGVKPIQQPV-RLDHPR---NPAN 160 (333)
T ss_dssp CCSEEEECCCCCSCT-TCHHHH--HHHHTHHHHHHHHHHHHTTCS-EEEEEEEGGGGCSCCCSSSB-CTTSCC---CCTT
T ss_pred CCcEEEECceecCCC-ccCChH--HHHHHHHHHHHHHHHHHhCCC-EEEEECcHHHhCCCcccCCC-CcCCCC---CCCC
Confidence 569999999986543 222333 999999999999999998875 999999999998 5444 677766 456
Q ss_pred ChHHHHHHHHHHHHHH-HHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHH
Q 042406 229 SLYAATKKAGEAIAHA-YNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIV 307 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~-~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 307 (424)
+.|+.+|+++|.+++. +. +++++||+++|||+. ...+++.++..+..+. .++ + ++..++++|++|+|
T Consensus 161 ~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~-~~~~~~~~~~~~~~~~--~~~---~-~~~~~~~i~v~Dva 228 (333)
T 2q1w_A 161 SSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRN-VSGPLPIFFQRLSEGK--KCF---V-TKARRDFVFVKDLA 228 (333)
T ss_dssp CHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTC-CSSHHHHHHHHHHTTC--CCE---E-EECEECEEEHHHHH
T ss_pred CchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCC-cCcHHHHHHHHHHcCC--eee---C-CCceEeeEEHHHHH
Confidence 8999999999999988 64 789999999999983 3455666777777776 333 3 56788999999999
Q ss_pred HHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCC---CCcccccCChHHH
Q 042406 308 KGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN---GDVQFTHANISLA 384 (424)
Q Consensus 308 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~d~s~~ 384 (424)
++++.+++.+. +++||+++++.+|+.|+++.+.+.+|.+ .+...+.+.. .......+|++|+
T Consensus 229 ~ai~~~~~~~~--------------g~~~~v~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~ 293 (333)
T 2q1w_A 229 RATVRAVDGVG--------------HGAYHFSSGTDVAIKELYDAVVEAMALP-SYPEPEIRELGPDDAPSILLDPSRTI 293 (333)
T ss_dssp HHHHHHHTTCC--------------CEEEECSCSCCEEHHHHHHHHHHHTTCS-SCCCCEEEECCTTSCCCCCBCCHHHH
T ss_pred HHHHHHHhcCC--------------CCEEEeCCCCCccHHHHHHHHHHHhCCC-CceeCCCCCcccccccccccCCHHHH
Confidence 99999987643 2899999999999999999999999987 4443332210 1114567899999
Q ss_pred HhHcCCcccCCHHHHHHHHHHHHHHHh
Q 042406 385 QRELGYMPTTDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 385 ~~~LG~~p~~~l~~~l~~~v~~~~~~~ 411 (424)
++. ||+|.++++++|+++++|++++.
T Consensus 294 ~~~-G~~p~~~~~~~l~~~~~~~~~~~ 319 (333)
T 2q1w_A 294 QDF-GKIEFTPLKETVAAAVAYFREYG 319 (333)
T ss_dssp HHH-CCCCCCCHHHHHHHHHHHHHHHC
T ss_pred Hhc-CCCcCCCHHHHHHHHHHHHHHHC
Confidence 998 99999999999999999998764
No 43
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=100.00 E-value=8.1e-42 Score=322.71 Aligned_cols=278 Identities=19% Similarity=0.193 Sum_probs=234.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.-|+||||||+||||++|+++|+++|++|++++|+ .+|++|.+++.+++++.++|+
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~------------------------~~Dl~d~~~~~~~~~~~~~d~ 66 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ------------------------DLDITNVLAVNKFFNEKKPNV 66 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT------------------------TCCTTCHHHHHHHHHHHCCSE
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc------------------------cCCCCCHHHHHHHHHhcCCCE
Confidence 45789999999999999999999999999999983 279999999999998656699
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
||||||.........+++..+++|+.|+.+++++|++.+. +||++||.++|+.....+++|+++. .|.+.|+.+|++
T Consensus 67 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~--~iv~~SS~~v~~~~~~~~~~E~~~~-~~~~~Y~~sK~~ 143 (292)
T 1vl0_A 67 VINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA--EIVQISTDYVFDGEAKEPITEFDEV-NPQSAYGKTKLE 143 (292)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC--EEEEEEEGGGSCSCCSSCBCTTSCC-CCCSHHHHHHHH
T ss_pred EEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEechHHeECCCCCCCCCCCCCC-CCccHHHHHHHH
Confidence 9999998765555677889999999999999999999875 8999999999998766788888766 778999999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
+|.+++.+ +.+++++||+.|||| . ..++..++..+..+.++.++ ++..++|+|++|+|++++.+++.+
T Consensus 144 ~E~~~~~~----~~~~~~lR~~~v~G~-~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~v~Dva~~~~~~~~~~ 211 (292)
T 1vl0_A 144 GENFVKAL----NPKYYIVRTAWLYGD-G--NNFVKTMINLGKTHDELKVV-----HDQVGTPTSTVDLARVVLKVIDEK 211 (292)
T ss_dssp HHHHHHHH----CSSEEEEEECSEESS-S--SCHHHHHHHHHHHCSEEEEE-----SSCEECCEEHHHHHHHHHHHHHHT
T ss_pred HHHHHHhh----CCCeEEEeeeeeeCC-C--cChHHHHHHHHhcCCcEEee-----cCeeeCCccHHHHHHHHHHHHhcC
Confidence 99999887 457899999999999 3 24566677777778777664 247889999999999999999875
Q ss_pred cccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCC----CCCCcccccCChHHHHhHcCCccc
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP----RNGDVQFTHANISLAQRELGYMPT 393 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~----~~~~~~~~~~d~s~~~~~LG~~p~ 393 (424)
. + ++||+++++++|+.|+++.+.+.+|.+......+.. .........+|++|+++.|||+|+
T Consensus 212 -~--~-----------~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 277 (292)
T 1vl0_A 212 -N--Y-----------GTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR 277 (292)
T ss_dssp -C--C-----------EEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC
T ss_pred -C--C-----------cEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCC
Confidence 1 1 799999999999999999999999987655443321 122344577999999999999999
Q ss_pred CCHHHHHHHHHHHHHH
Q 042406 394 TDLETGLKKFVRWYLS 409 (424)
Q Consensus 394 ~~l~~~l~~~v~~~~~ 409 (424)
+++++|+++++||++
T Consensus 278 -~~~~~l~~~~~~~~~ 292 (292)
T 1vl0_A 278 -EWKESLKEYIDLLQM 292 (292)
T ss_dssp -BHHHHHHHHHHHHTC
T ss_pred -CHHHHHHHHHHHhcC
Confidence 999999999999863
No 44
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=100.00 E-value=4.4e-42 Score=327.01 Aligned_cols=296 Identities=22% Similarity=0.376 Sum_probs=223.2
Q ss_pred eEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---Ccc
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---AFT 156 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---~~d 156 (424)
+||||||+||||++|+++|+++| ++|++++|..+.... ... .++. +.+|++|.+.+.+++++. ++|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~-------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d 70 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNL-------VDLN-IADYMDKEDFLIQIMAGEEFGDVE 70 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG--HHH-------HTSC-CSEEEEHHHHHHHHHTTCCCSSCC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh--hhc-------Ccce-eccccccHHHHHHHHhccccCCCc
Confidence 48999999999999999999999 999999997653211 101 1222 678999999999998852 469
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK 236 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~ 236 (424)
+|||+||.... ...+++..+++|+.++.+++++|++.++ +||++||.++||.....+++|+++. .|.+.|+.+|+
T Consensus 71 ~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~SS~~v~g~~~~~~~~E~~~~-~p~~~Y~~sK~ 145 (310)
T 1eq2_A 71 AIFHEGACSST--TEWDGKYMMDNNYQYSKELLHYCLEREI--PFLYASSAATYGGRTSDFIESREYE-KPLNVYGYSKF 145 (310)
T ss_dssp EEEECCSCCCT--TCCCHHHHHHHTHHHHHHHHHHHHHHTC--CEEEEEEGGGGTTCCSCBCSSGGGC-CCSSHHHHHHH
T ss_pred EEEECcccccC--cccCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEeeHHHhCCCCCCCCCCCCCC-CCCChhHHHHH
Confidence 99999998653 4567788999999999999999999886 8999999999997766677787755 77899999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCC----CCcHHHHHHHHHcCCceeEEecCCCCcc-ccccccHHHHHHHHH
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP----DMAYFFFTRDIIRGKRITVYEAPDGASV-ARDFTYIDDIVKGCL 311 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~Dva~a~~ 311 (424)
++|.+++.+++++|++++++||+.||||+... ..++..++..+..+.++.++ ++++. .++|+|++|+|++++
T Consensus 146 ~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~i~v~Dva~~~~ 222 (310)
T 1eq2_A 146 LFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLF---EGSENFKRDFVYVGDVADVNL 222 (310)
T ss_dssp HHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC----------------CBCEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEe---cCCCcceEccEEHHHHHHHHH
Confidence 99999999988889999999999999997642 34566788888888877665 56778 899999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCC---CCcccccCChHHHHhHc
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN---GDVQFTHANISLAQREL 388 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~d~s~~~~~L 388 (424)
.+++.+. +++||+++++++|+.|+++.+.+.+|.+ .....+.+.. ........|++++++ |
T Consensus 223 ~~~~~~~--------------~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l 286 (310)
T 1eq2_A 223 WFLENGV--------------SGIFNLGTGRAESFQAVADATLAYHKKG-QIEYIPFPDKLKGRYQAFTQADLTNLRA-A 286 (310)
T ss_dssp HHHHHCC--------------CEEEEESCSCCBCHHHHHHHC----------------------CCCSCCBCCHHHHH-T
T ss_pred HHHhcCC--------------CCeEEEeCCCccCHHHHHHHHHHHcCCC-CceeCCCChhhhcccccccccchHHHHh-c
Confidence 9998753 1799999999999999999999999987 3333333321 122345678899976 9
Q ss_pred CC-cccCCHHHHHHHHHHHHHHH
Q 042406 389 GY-MPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 389 G~-~p~~~l~~~l~~~v~~~~~~ 410 (424)
|| .|.++++++|+++++||+++
T Consensus 287 G~~~~~~~l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 287 GYDKPFKTVAEGVTEYMAWLNRD 309 (310)
T ss_dssp TCCCCCCCHHHHHHHHHHHTC--
T ss_pred CCCCCCCCHHHHHHHHHHHHHhc
Confidence 99 78889999999999998754
No 45
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=100.00 E-value=2.6e-42 Score=325.30 Aligned_cols=280 Identities=19% Similarity=0.179 Sum_probs=229.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++|+||||| +||||++|+++|+++|++|++++|+.+. ...+++++.+|++|.+++.+++++ ++|+
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~~~~~~~~Dl~d~~~~~~~~~~-~~d~ 66 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQP-------------MPAGVQTLIADVTRPDTLASIVHL-RPEI 66 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSC-------------CCTTCCEEECCTTCGGGCTTGGGG-CCSE
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccc-------------cccCCceEEccCCChHHHHHhhcC-CCCE
Confidence 468999999 5999999999999999999999996543 125789999999999999999986 4699
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
|||+||.. ..+++..+++|+.++.+++++|++.+++ +|||+||.++||.....+++|+++. .|.+.|+.+|++
T Consensus 67 vih~a~~~-----~~~~~~~~~~n~~~~~~ll~a~~~~~~~-~~v~~SS~~vyg~~~~~~~~E~~~~-~p~~~Y~~sK~~ 139 (286)
T 3gpi_A 67 LVYCVAAS-----EYSDEHYRLSYVEGLRNTLSALEGAPLQ-HVFFVSSTGVYGQEVEEWLDEDTPP-IAKDFSGKRMLE 139 (286)
T ss_dssp EEECHHHH-----HHC-----CCSHHHHHHHHHHTTTSCCC-EEEEEEEGGGCCCCCSSEECTTSCC-CCCSHHHHHHHH
T ss_pred EEEeCCCC-----CCCHHHHHHHHHHHHHHHHHHHhhCCCC-EEEEEcccEEEcCCCCCCCCCCCCC-CCCChhhHHHHH
Confidence 99999863 2456788899999999999999988875 9999999999998877788888866 788999999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
+|.+ ... ++++++||++||||+.. .++..+.. ... .+.++..++|+|++|+|++++.+++.+
T Consensus 140 ~E~~-~~~-----~~~~ilR~~~v~G~~~~------~~~~~~~~-~~~-----~~~~~~~~~~i~v~Dva~~~~~~~~~~ 201 (286)
T 3gpi_A 140 AEAL-LAA-----YSSTILRFSGIYGPGRL------RMIRQAQT-PEQ-----WPARNAWTNRIHRDDGAAFIAYLIQQR 201 (286)
T ss_dssp HHHH-GGG-----SSEEEEEECEEEBTTBC------HHHHHTTC-GGG-----SCSSBCEECEEEHHHHHHHHHHHHHHH
T ss_pred HHHH-Hhc-----CCeEEEecccccCCCch------hHHHHHHh-ccc-----CCCcCceeEEEEHHHHHHHHHHHHhhh
Confidence 9998 543 89999999999999764 35555555 222 156788999999999999999999885
Q ss_pred cccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCcccC-CH
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTT-DL 396 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p~~-~l 396 (424)
... ..+++||+++++++|+.|+++.+.+.+|.+.+....+ .......+|++|++ +|||+|++ ++
T Consensus 202 ~~~----------~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~----~~~~~~~~d~~k~~-~lG~~p~~~~l 266 (286)
T 3gpi_A 202 SHA----------VPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATP----PVQGNKKLSNARLL-ASGYQLIYPDY 266 (286)
T ss_dssp TTS----------CCCSEEEECCSCCEEHHHHHHHHHHHTTCCCCCSCCC----CBCSSCEECCHHHH-HTTCCCSSCSH
T ss_pred ccC----------CCCceEEEeCCCCCCHHHHHHHHHHHcCCCCCCCCCc----ccCCCeEeeHHHHH-HcCCCCcCCcH
Confidence 311 2238999999999999999999999999887655432 34456678999998 89999998 69
Q ss_pred HHHHHHHHHHHHHHhc
Q 042406 397 ETGLKKFVRWYLSYYN 412 (424)
Q Consensus 397 ~~~l~~~v~~~~~~~~ 412 (424)
+++|+++++|+....+
T Consensus 267 ~e~l~~~~~~~~~~~~ 282 (286)
T 3gpi_A 267 VSGYGALLAAMREGHH 282 (286)
T ss_dssp HHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHhcccc
Confidence 9999999999976544
No 46
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=6.2e-41 Score=350.97 Aligned_cols=311 Identities=23% Similarity=0.345 Sum_probs=253.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHH-HHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSL-LDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-v~~~~~~~~ 154 (424)
.++|+||||||+||||++|+++|+++ |++|++++|+.+.... .....+++++.+|++|.++ +.++++++
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~--------~~~~~~v~~v~~Dl~d~~~~~~~~~~~~- 383 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR--------FLNHPHFHFVEGDISIHSEWIEYHVKKC- 383 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG--------GTTCTTEEEEECCTTTCHHHHHHHHHHC-
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh--------hccCCceEEEECCCCCcHHHHHHhhcCC-
Confidence 46789999999999999999999998 8999999997643211 1123578999999999765 78888866
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC------CCCC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT------DQPA 228 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~------~~~~ 228 (424)
|+||||||.........+++..+++|+.|+.+++++|++.+ + +||++||.++||.....+++|+++. ..|.
T Consensus 384 -D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~-r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~ 460 (660)
T 1z7e_A 384 -DVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-K-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPR 460 (660)
T ss_dssp -SEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTT
T ss_pred -CEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-C-EEEEEecHHHcCCCCCcccCCCccccccCcccCCC
Confidence 99999999876554556778899999999999999999987 4 9999999999997766677777642 1455
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCC--------CCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRP--------DMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
+.|+.||+++|.+++.++++.|++++++||++||||+... ..++..++..+..+.++.++ +++++.++|
T Consensus 461 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---g~g~~~~~~ 537 (660)
T 1z7e_A 461 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLI---DGGKQKRCF 537 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEE---GGGCCEEEC
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEe---CCCCeEEEE
Confidence 6899999999999999988889999999999999997642 34567788888889888776 567889999
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC-cccHHHHHHHHHHHhCcccccccccCCC---------
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT-PVPVSRLVSLLEKILKVKAETKVLPLPR--------- 370 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~s~~el~~~i~~~~g~~~~~~~~~~~~--------- 370 (424)
+|++|+|++++.+++.+... ..+++||+++++ ++|+.|+++.+.+.+|.+......|...
T Consensus 538 i~v~Dva~ai~~~l~~~~~~----------~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~ 607 (660)
T 1z7e_A 538 TDIRDGIEALYRIIENAGNR----------CDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSS 607 (660)
T ss_dssp EEHHHHHHHHHHHHHCGGGT----------TTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHH
T ss_pred EEHHHHHHHHHHHHhCcccc----------CCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccc
Confidence 99999999999999865421 123899999986 8999999999999998754332222110
Q ss_pred -----CCCcccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 371 -----NGDVQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 371 -----~~~~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
..+.....+|++|++++|||+|+++++++|+++++||+++..
T Consensus 608 ~~~~~~~~~~~~~~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~ 654 (660)
T 1z7e_A 608 YYGKGYQDVEHRKPSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 654 (660)
T ss_dssp HHCTTCCCCSCCCBCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSC
T ss_pred cccccccchhhcccCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhcc
Confidence 122345678999999999999999999999999999988754
No 47
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=7.1e-41 Score=353.11 Aligned_cols=326 Identities=26% Similarity=0.364 Sum_probs=247.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..+++|+||||||+||||++|+++|+++|++|++++|............. .....++.++.+|++|.+++.+++++.+
T Consensus 7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~--~~~~~~v~~v~~Dl~d~~~l~~~~~~~~ 84 (699)
T 1z45_A 7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLE--VLTKHHIPFYEVDLCDRKGLEKVFKEYK 84 (699)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHH--HHHTSCCCEEECCTTCHHHHHHHHHHSC
T ss_pred cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHh--hccCCceEEEEcCCCCHHHHHHHHHhCC
Confidence 34678999999999999999999999999999999997654322222111 1123578899999999999999998656
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCC----CCCCCCCCCCCCCCCh
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNK----KVPFSEKDRTDQPASL 230 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~----~~~~~e~~~~~~~~~~ 230 (424)
+|+||||||.........+++..+++|+.++.+++++|++.+++ +||++||.++||... ..+++|+++. .|.+.
T Consensus 85 ~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~-~iV~~SS~~vyg~~~~~~~~~~~~E~~~~-~p~~~ 162 (699)
T 1z45_A 85 IDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVS-KFVFSSSATVYGDATRFPNMIPIPEECPL-GPTNP 162 (699)
T ss_dssp CCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCC-EEEEEEEGGGGCCGGGSTTCCSBCTTSCC-CCCSH
T ss_pred CCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEECcHHHhCCCccccccCCccccCCC-CCCCh
Confidence 69999999987654445667789999999999999999998875 999999999998642 2466676654 67899
Q ss_pred HHHHHHHHHHHHHHHHHH--hCCcEEEEEeccccCCCCC----------CCCcHHHHHHHHHcC--CceeEEec---CCC
Q 042406 231 YAATKKAGEAIAHAYNHI--YGLSITGLRFFTVYGPWGR----------PDMAYFFFTRDIIRG--KRITVYEA---PDG 293 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~--~~i~~~~vrp~~v~G~~~~----------~~~~~~~~~~~~~~~--~~~~~~~~---~~~ 293 (424)
|+.+|+++|.+++.++.+ .+++++++||++||||+.. ...++..+. .+..+ .++.++.. ..+
T Consensus 163 Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~ 241 (699)
T 1z45_A 163 YGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMA-QVAVGRREKLYIFGDDYDSRD 241 (699)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHH-HHHTTSSSCCCCC------CC
T ss_pred HHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHH-HHHhcCCCceEEeCCcccCCC
Confidence 999999999999999876 6999999999999998531 123444343 33333 34544410 015
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCC
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGD 373 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~ 373 (424)
+++.++|||++|+|++++.+++......+. ...+++||+++++++|+.|+++.+.+.+|.+.+....+. +..+
T Consensus 242 g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~------~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~-~~~~ 314 (699)
T 1z45_A 242 GTPIRDYIHVVDLAKGHIAALQYLEAYNEN------EGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGR-RAGD 314 (699)
T ss_dssp SSCEECEEEHHHHHHHHHHHHHHHHHSCTT------CCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC----------
T ss_pred CCeeEeeEEHHHHHHHHHHHHhhhhccccc------cCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecCC-CCCc
Confidence 678999999999999999998764210000 012379999999999999999999999998876554432 2344
Q ss_pred cccccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 374 VQFTHANISLAQRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 374 ~~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
.....+|++|++++|||+|+++++++|+++++|++++..
T Consensus 315 ~~~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~ 353 (699)
T 1z45_A 315 VLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPF 353 (699)
T ss_dssp CCCCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred cccccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence 556789999999999999999999999999999987543
No 48
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=100.00 E-value=6.8e-41 Score=320.02 Aligned_cols=303 Identities=19% Similarity=0.262 Sum_probs=236.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhC--CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+||||||+||||++|+++|+++ |++|++++|+.... .++.++.+|++|.+++.++++..++|+|
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~--------------~~~~~~~~D~~d~~~~~~~~~~~~~d~v 66 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT--------------GGIKFITLDVSNRDEIDRAVEKYSIDAI 66 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC--------------TTCCEEECCTTCHHHHHHHHHHTTCCEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc--------------cCceEEEecCCCHHHHHHHHhhcCCcEE
Confidence 4899999999999999999999 89999999864321 1567899999999999999986567999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCC-CCCCCCCCCCCCCCChHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNK-KVPFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~-~~~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
||+|+.... ....+++..+++|+.|+.+++++|++.+++ +||++||.++|+... ..+..|+.+. .|.+.|+.+|++
T Consensus 67 ih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~v~~SS~~~~~~~~~~~~~~e~~~~-~p~~~Y~~sK~~ 143 (317)
T 3ajr_A 67 FHLAGILSA-KGEKDPALAYKVNMNGTYNILEAAKQHRVE-KVVIPSTIGVFGPETPKNKVPSITIT-RPRTMFGVTKIA 143 (317)
T ss_dssp EECCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHHTTCC-EEEEEEEGGGCCTTSCSSSBCSSSCC-CCCSHHHHHHHH
T ss_pred EECCcccCC-ccccChHHHhhhhhHHHHHHHHHHHHcCCC-EEEEecCHHHhCCCCCCCCccccccC-CCCchHHHHHHH
Confidence 999997542 234577889999999999999999998875 999999999998653 3345555544 788999999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCCC----CcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHH
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD----MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAG 313 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 313 (424)
+|.+++.+.+++|++++++||+.+||+...+. .....++...+.+..+..+ ++++..++|+|++|+|++++.+
T Consensus 144 ~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~v~Dva~a~~~~ 220 (317)
T 3ajr_A 144 AELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCY---LAPNRALPMMYMPDALKALVDL 220 (317)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEEC---SCTTCCEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceee---cCccceeeeeEHHHHHHHHHHH
Confidence 99999999888899999999999999753221 1122233344455555544 4677889999999999999999
Q ss_pred hhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCC--CCcccccCChHHHHhHcCCc
Q 042406 314 LDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN--GDVQFTHANISLAQRELGYM 391 (424)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~--~~~~~~~~d~s~~~~~LG~~ 391 (424)
++.+.... ..+++||+++ ..+|+.|+++.+.+.+|. ..+.+.+..+. .......+|++|++++|||+
T Consensus 221 l~~~~~~~---------~~g~~~~i~~-~~~s~~e~~~~i~~~~~~-~~i~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~ 289 (317)
T 3ajr_A 221 YEADRDKL---------VLRNGYNVTA-YTFTPSELYSKIKERIPE-FEIEYKEDFRDKIAATWPESLDSSEASNEWGFS 289 (317)
T ss_dssp HHCCGGGC---------SSCSCEECCS-EEECHHHHHHHHHTTCCS-CCEEECCCHHHHHHTTSCSCBCCHHHHHHHCCC
T ss_pred HhCCcccc---------ccCceEecCC-ccccHHHHHHHHHHHCCc-cccccccccchhhccccccccCHHHHHHHcCCC
Confidence 98754311 1237999986 579999999999999883 22222221000 01112467999999999999
Q ss_pred ccCCHHHHHHHHHHHHHHHhccC
Q 042406 392 PTTDLETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 392 p~~~l~~~l~~~v~~~~~~~~~~ 414 (424)
|+++++++|+++++|++++....
T Consensus 290 p~~~~~~~l~~~~~~~~~~~~~~ 312 (317)
T 3ajr_A 290 IEYDLDRTIDDMIDHISEKLGIE 312 (317)
T ss_dssp CCCCHHHHHHHHHHHHHHHTTSS
T ss_pred CCCCHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999887653
No 49
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=100.00 E-value=3.4e-41 Score=321.93 Aligned_cols=292 Identities=17% Similarity=0.207 Sum_probs=209.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+||||||+||||++|+++|+++|++|++++|+.+. .+ ++.+|++|.+++.+++++.++|+|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------------~~--~~~~Dl~d~~~~~~~~~~~~~d~v 64 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR---------------PK--FEQVNLLDSNAVHHIIHDFQPHVI 64 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-----------------------------------CHHHHHHHCCSEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC---------------CC--eEEecCCCHHHHHHHHHhhCCCEE
Confidence 5789999999999999999999999999999984321 12 788999999999999987667999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
|||||.........+++..+++|+.|+.+++++|.+.+. +||++||.++|+. ...+++|+++. .|.+.|+.+|+++
T Consensus 65 ih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~--~~v~~SS~~v~~~-~~~~~~E~~~~-~~~~~Y~~sK~~~ 140 (315)
T 2ydy_A 65 VHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA--FLIYISSDYVFDG-TNPPYREEDIP-APLNLYGKTKLDG 140 (315)
T ss_dssp EECC-------------------CHHHHHHHHHHHHHTC--EEEEEEEGGGSCS-SSCSBCTTSCC-CCCSHHHHHHHHH
T ss_pred EECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC--eEEEEchHHHcCC-CCCCCCCCCCC-CCcCHHHHHHHHH
Confidence 999998655444567788999999999999999999874 8999999999987 45678888765 6789999999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCC-CcHHHHHHHHH-cCCceeEEecCCCCccccccccHHHHHHHHHHHhhh
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPD-MAYFFFTRDII-RGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
|.+++.+ ++++++|||+.||||..... .++..++..+. .+..+.+. ++..++++|++|+|++++.++++
T Consensus 141 e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~v~Dva~a~~~~~~~ 211 (315)
T 2ydy_A 141 EKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMD-----HWQQRFPTHVKDVATVCRQLAEK 211 (315)
T ss_dssp HHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEE-----CSSBBCCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeec-----cCceECcEEHHHHHHHHHHHHHh
Confidence 9999886 67889999999999976521 23445666666 67666553 35788999999999999999876
Q ss_pred ccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccc-cccccC-C--CCCCcccccCChHHHHhHcCCcc
Q 042406 317 AKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE-TKVLPL-P--RNGDVQFTHANISLAQRELGYMP 392 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~-~~~~~~-~--~~~~~~~~~~d~s~~~~~LG~~p 392 (424)
..... ..+++||+++++++|+.|+++.+.+.+|.+.. +...+. + .........+|++|+++. ||+|
T Consensus 212 ~~~~~---------~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~-G~~p 281 (315)
T 2ydy_A 212 RMLDP---------SIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETL-GIGQ 281 (315)
T ss_dssp HHTCT---------TCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHT-TCCC
T ss_pred hcccc---------CCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhc-CCCC
Confidence 41100 12389999999999999999999999998754 222221 1 112234567899999997 9999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 042406 393 TTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 393 ~~~l~~~l~~~v~~~~~~ 410 (424)
.++++++|+++++||++.
T Consensus 282 ~~~~~~~l~~~~~~~~~~ 299 (315)
T 2ydy_A 282 RTPFRIGIKESLWPFLID 299 (315)
T ss_dssp CCCHHHHHHHHHGGGCC-
T ss_pred CCCHHHHHHHHHHHHccc
Confidence 999999999999999876
No 50
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.9e-40 Score=320.33 Aligned_cols=306 Identities=19% Similarity=0.178 Sum_probs=241.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCC-------CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHH
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRG-------DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDK 148 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~ 148 (424)
.+++|+||||||+||||++|+++|+++| ++|++++|+.+.... ....++.++.+|++|.+++.+
T Consensus 11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~ 81 (342)
T 2hrz_A 11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA---------GFSGAVDARAADLSAPGEAEK 81 (342)
T ss_dssp CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT---------TCCSEEEEEECCTTSTTHHHH
T ss_pred CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc---------ccCCceeEEEcCCCCHHHHHH
Confidence 3578999999999999999999999999 899999997543211 123568899999999999999
Q ss_pred HhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 149 IFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-----PQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 149 ~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-----~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++++ ++|+||||||... .....+++..+++|+.|+.+++++|++.+ ++ +||++||.++|+.....+++|+++
T Consensus 82 ~~~~-~~d~vih~A~~~~-~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~-~iv~~SS~~~~~~~~~~~~~E~~~ 158 (342)
T 2hrz_A 82 LVEA-RPDVIFHLAAIVS-GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKP-RVVFTSSIAVFGAPLPYPIPDEFH 158 (342)
T ss_dssp HHHT-CCSEEEECCCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCC-EEEEEEEGGGCCSSCCSSBCTTCC
T ss_pred HHhc-CCCEEEECCccCc-ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCc-EEEEeCchHhhCCCCCCCcCCCCC
Confidence 9852 4599999999754 23346778899999999999999998876 44 999999999999765668888876
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccC-CCCCCC---CcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYG-PWGRPD---MAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
. .|.+.|+.+|+++|.++++++.+++++.+++|++.||| |+.... .++..++..+..+.+..+. .+++..++
T Consensus 159 ~-~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 234 (342)
T 2hrz_A 159 T-TPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLP---VPESIRHW 234 (342)
T ss_dssp C-CCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEEC---SCTTCEEE
T ss_pred C-CCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeecc---CCCcccee
Confidence 6 67899999999999999999888889999999999999 654322 2455667777788776553 34567788
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccc--cccccCCCCC---Cc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAE--TKVLPLPRNG---DV 374 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~--~~~~~~~~~~---~~ 374 (424)
++|++|+|++++.+++.+.... ..+++||++ ++.+|+.|+++.+.+.+|.+.. +...+.+... ..
T Consensus 235 ~~~v~Dva~~~~~~~~~~~~~~---------~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~ 304 (342)
T 2hrz_A 235 HASPRSAVGFLIHGAMIDVEKV---------GPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEG 304 (342)
T ss_dssp EECHHHHHHHHHHHHHSCHHHH---------CSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTT
T ss_pred eEehHHHHHHHHHHHhcccccc---------CCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcc
Confidence 9999999999999987654210 012799996 5779999999999999997652 2222211100 01
Q ss_pred ccccCChHHHHhHcCCcccCCHHHHHHHHHHHHH
Q 042406 375 QFTHANISLAQRELGYMPTTDLETGLKKFVRWYL 408 (424)
Q Consensus 375 ~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~ 408 (424)
....+|++|+++ |||+|.++++++|+++++|++
T Consensus 305 ~~~~~d~~k~~~-lG~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 305 WAPGFEAKRARE-LGFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp SCCCBCCHHHHH-TTCCCCSSHHHHHHHHHHHHS
T ss_pred cccccChHHHHH-cCCCCCCCHHHHHHHHHHHhc
Confidence 113579999998 999999999999999999987
No 51
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=100.00 E-value=3.1e-40 Score=318.52 Aligned_cols=305 Identities=19% Similarity=0.163 Sum_probs=231.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEE-EccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVI-DADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~v~~~~~~~~ 154 (424)
.+++|+||||||+||||++|+++|+++|++|++++|+.+.......... .....+++++ .+|++|.+++.++++++
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~~~~D~~d~~~~~~~~~~~- 84 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWD--AKYPGRFETAVVEDMLKQGAYDEVIKGA- 84 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH--HHSTTTEEEEECSCTTSTTTTTTTTTTC-
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhh--ccCCCceEEEEecCCcChHHHHHHHcCC-
Confidence 4678999999999999999999999999999999996543221111111 0112578888 89999999999998855
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHh-cCCCCeEEEecCCcccCCCCC----CCCCCCCC------
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS-SDPQPAIVWASSSSVYGVNKK----VPFSEKDR------ 223 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~-~~~~~~~v~~SS~~vyg~~~~----~~~~e~~~------ 223 (424)
|+||||||..... .+++..+++|+.|+.+++++|.+ .+++ +||++||.++|+.... .+++|+++
T Consensus 85 -d~vih~A~~~~~~---~~~~~~~~~n~~g~~~ll~~~~~~~~~~-~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~ 159 (342)
T 1y1p_A 85 -AGVAHIASVVSFS---NKYDEVVTPAIGGTLNALRAAAATPSVK-RFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID 159 (342)
T ss_dssp -SEEEECCCCCSCC---SCHHHHHHHHHHHHHHHHHHHHTCTTCC-EEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred -CEEEEeCCCCCCC---CCHHHHHHHHHHHHHHHHHHHHhCCCCc-EEEEeccHHHhcCCCCCCCCcccCccccCchhhh
Confidence 9999999986532 46788999999999999999985 4554 9999999999864321 46677652
Q ss_pred ---------CCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCC---cHHHHHHHHHcCCceeEEe
Q 042406 224 ---------TDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDM---AYFFFTRDIIRGKRITVYE 289 (424)
Q Consensus 224 ---------~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~ 289 (424)
+..|.+.|+.||+++|.+++.+++++ +++++++||++||||...... ....++..+..+.+..++
T Consensus 160 ~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 238 (342)
T 1y1p_A 160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL- 238 (342)
T ss_dssp HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH-
T ss_pred hhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCcccc-
Confidence 11345789999999999999998876 789999999999999765432 667788888888876654
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCC
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP 369 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~ 369 (424)
+.+ ..++|+|++|+|++++.+++.+.. .++.+. +++..+|+.|+++.+.+.+|.+ .+. .+.+
T Consensus 239 --~~~-~~~~~v~v~Dva~a~~~~~~~~~~------------~g~~~~-~~g~~~s~~e~~~~i~~~~~~~-~~~-~~~~ 300 (342)
T 1y1p_A 239 --ALM-PPQYYVSAVDIGLLHLGCLVLPQI------------ERRRVY-GTAGTFDWNTVLATFRKLYPSK-TFP-ADFP 300 (342)
T ss_dssp --HTC-CSEEEEEHHHHHHHHHHHHHCTTC------------CSCEEE-ECCEEECHHHHHHHHHHHCTTS-CCC-CCCC
T ss_pred --ccC-CcCCEeEHHHHHHHHHHHHcCccc------------CCceEE-EeCCCCCHHHHHHHHHHHCCCc-cCC-CCCC
Confidence 233 678999999999999999876431 123443 4556799999999999999875 211 1111
Q ss_pred CCCCcccccCChHHHHhHcCC---cccCCHHHHHHHHHHHHH
Q 042406 370 RNGDVQFTHANISLAQRELGY---MPTTDLETGLKKFVRWYL 408 (424)
Q Consensus 370 ~~~~~~~~~~d~s~~~~~LG~---~p~~~l~~~l~~~v~~~~ 408 (424)
. .......+|++|+++.||| .+.++++++|+++++|++
T Consensus 301 ~-~~~~~~~~d~~k~~~~lg~~~~~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 301 D-QGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSET 341 (342)
T ss_dssp C-CCCCCCEECCHHHHHHHHHTTCCSCCCHHHHHHHHHCCSC
T ss_pred c-cccccccCChHHHHHHHhhcccCCcCCHHHHHHHHHHHhh
Confidence 1 1122356799999999887 455699999999999874
No 52
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=100.00 E-value=6.7e-39 Score=312.03 Aligned_cols=296 Identities=16% Similarity=0.144 Sum_probs=232.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-----CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRG-----DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+|+||||||+||||++|+++|+++| ++|++++|+.+... ....+++++.+|++|.+++.+++++.
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~----------~~~~~~~~~~~Dl~d~~~~~~~~~~~ 70 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW----------HEDNPINYVQCDISDPDDSQAKLSPL 70 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC----------CCSSCCEEEECCTTSHHHHHHHHTTC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc----------cccCceEEEEeecCCHHHHHHHHhcC
Confidence 4789999999999999999999999 99999999765321 12357899999999999999999985
Q ss_pred C-ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc--CCCCeEE-------EecCCcccCCC--CCCCCCCC
Q 042406 154 A-FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS--DPQPAIV-------WASSSSVYGVN--KKVPFSEK 221 (424)
Q Consensus 154 ~-~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~--~~~~~~v-------~~SS~~vyg~~--~~~~~~e~ 221 (424)
+ +|+|||+||... .+++..+++|+.++.+++++|++. +++ +|| |+||.++||.. ...+++|+
T Consensus 71 ~~~d~vih~a~~~~-----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~-~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~ 144 (364)
T 2v6g_A 71 TDVTHVFYVTWANR-----STEQENCEANSKMFRNVLDAVIPNCPNLK-HISLQTGRKHYMGPFESYGKIESHDPPYTED 144 (364)
T ss_dssp TTCCEEEECCCCCC-----SSHHHHHHHHHHHHHHHHHHHTTTCTTCC-EEEEECCTHHHHCCGGGTTTSCCCCSSBCTT
T ss_pred CCCCEEEECCCCCc-----chHHHHHHHhHHHHHHHHHHHHHhccccc-eEEeccCceEEEechhhccccccCCCCCCcc
Confidence 4 799999999753 467889999999999999999987 664 887 89999999975 34577887
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHhC-CcEEEEEeccccCCCCCC--CCcHHH-HHHHH--HcCCceeEEecCCCC-
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIYG-LSITGLRFFTVYGPWGRP--DMAYFF-FTRDI--IRGKRITVYEAPDGA- 294 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~-i~~~~vrp~~v~G~~~~~--~~~~~~-~~~~~--~~~~~~~~~~~~~~~- 294 (424)
++...+.+.| .++|.+++++.+.++ ++++++||+.||||+... +...+. +...+ ..+.++.++ +++
T Consensus 145 ~~~~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---g~~~ 217 (364)
T 2v6g_A 145 LPRLKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFT---GCKA 217 (364)
T ss_dssp SCCCSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCC---SCHH
T ss_pred ccCCccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecC---CCcc
Confidence 7653346778 458999988887676 999999999999997753 222333 34444 357666544 455
Q ss_pred --ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccc--cccCC-
Q 042406 295 --SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETK--VLPLP- 369 (424)
Q Consensus 295 --~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~--~~~~~- 369 (424)
....+++|++|+|++++.+++.+.. .+++||+++++++|+.|+++.+.+.+|.+.... ..|.+
T Consensus 218 ~~~~~~~~~~v~Dva~a~~~~~~~~~~------------~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~ 285 (364)
T 2v6g_A 218 AWDGYSDCSDADLIAEHHIWAAVDPYA------------KNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKL 285 (364)
T ss_dssp HHHSCBCCEEHHHHHHHHHHHHHCGGG------------TTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCH
T ss_pred cccccCCCCcHHHHHHHHHHHHhCCCC------------CCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccH
Confidence 3457888899999999999986532 237999999999999999999999999876533 22221
Q ss_pred --------------------CCC---Cc-----------cc-ccCChHHHHhHcCCcccCCHHHHHHHHHHHHHHH
Q 042406 370 --------------------RNG---DV-----------QF-THANISLAQRELGYMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 370 --------------------~~~---~~-----------~~-~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~ 410 (424)
... .. .. ..+|++|+++ |||+|.++++++|+++++|+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~-lG~~p~~~~~e~l~~~~~~~~~~ 360 (364)
T 2v6g_A 286 QDLMKGKEPVWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKE-HGFLGFRNSKNAFISWIDKAKAY 360 (364)
T ss_dssp HHHTTTCHHHHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHH-TTCCCCCCHHHHHHHHHHHHHHT
T ss_pred HHHHhhhHHHHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHh-cCCCCCCCHHHHHHHHHHHHHHc
Confidence 011 10 23 4789999987 99999889999999999999865
No 53
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=100.00 E-value=8.8e-39 Score=308.14 Aligned_cols=306 Identities=19% Similarity=0.224 Sum_probs=217.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
.++|+||||||+||||++|+++|+++|++|++++|+.+....... .........+++++.+|++|.+++.++++++ |
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d 79 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIKGC--T 79 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHTTC--S
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHcCC--C
Confidence 367899999999999999999999999999999997653211111 1000000135889999999999999999876 9
Q ss_pred EEEEcccccCchhhccChH-HHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCc-ccCCCC-CCCCCCCCCCC-------
Q 042406 157 HVMHLAAQAGVRYAMQNPN-SYVESNIAGFVNLLETCKSSD-PQPAIVWASSSS-VYGVNK-KVPFSEKDRTD------- 225 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~-~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~-vyg~~~-~~~~~e~~~~~------- 225 (424)
+|||+|+... ....++. ..+++|+.|+.+++++|++.+ ++ +||++||.+ +|+... ..+++|+++..
T Consensus 80 ~Vih~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~-riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 156 (337)
T 2c29_D 80 GVFHVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAAAKTVR-RLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAK 156 (337)
T ss_dssp EEEECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCC-EEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHH
T ss_pred EEEEeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHhCCCcc-EEEEeeeHhhcccCCCCCcccCcccCCchhhhccc
Confidence 9999998752 2223443 589999999999999999887 54 999999987 454322 23455554321
Q ss_pred -CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHH--HHcCCceeEEecCCCCcccccccc
Q 042406 226 -QPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRD--IIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 -~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.+...|+.||.++|.++.++.+.+|+++++|||++||||+..... ...+... ...+.... + +.. ....|+|
T Consensus 157 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~-~~~~~~~~~~~~g~~~~-~---~~~-~~~~~i~ 230 (337)
T 2c29_D 157 KMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSM-PPSLITALSPITGNEAH-Y---SII-RQGQFVH 230 (337)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSC-CHHHHHHTHHHHTCGGG-H---HHH-TEEEEEE
T ss_pred CCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCC-CchHHHHHHHHcCCCcc-c---ccc-CCCCEEE
Confidence 134579999999999999988778999999999999999764332 1111111 13343321 1 111 1234999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCc-ccccccccCCCCCCcccccCCh
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV-KAETKVLPLPRNGDVQFTHANI 381 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~d~ 381 (424)
++|+|++++.+++.+.. ++.|++++ ..+|+.|+++.+.+.++. +.+....+ ...+.....+|+
T Consensus 231 v~Dva~a~~~~~~~~~~-------------~~~~~~~~-~~~s~~e~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~d~ 294 (337)
T 2c29_D 231 LDDLCNAHIYLFENPKA-------------EGRYICSS-HDCIILDLAKMLREKYPEYNIPTEFKG--VDENLKSVCFSS 294 (337)
T ss_dssp HHHHHHHHHHHHHCTTC-------------CEEEEECC-EEEEHHHHHHHHHHHCTTSCCCSCCTT--CCTTCCCCEECC
T ss_pred HHHHHHHHHHHhcCccc-------------CceEEEeC-CCCCHHHHHHHHHHHCCCccCCCCCCc--ccCCCccccccH
Confidence 99999999998875321 15687665 458999999999998742 22211111 122334567899
Q ss_pred HHHHhHcCCcccCCHHHHHHHHHHHHHHHh
Q 042406 382 SLAQRELGYMPTTDLETGLKKFVRWYLSYY 411 (424)
Q Consensus 382 s~~~~~LG~~p~~~l~~~l~~~v~~~~~~~ 411 (424)
+|+ ++|||+|+++++|+|+++++|+++..
T Consensus 295 ~k~-~~lG~~p~~~l~e~l~~~~~~~~~~~ 323 (337)
T 2c29_D 295 KKL-TDLGFEFKYSLEDMFTGAVDTCRAKG 323 (337)
T ss_dssp HHH-HHHTCCCCCCHHHHHHHHHHHHHHTT
T ss_pred HHH-HHcCCCcCCCHHHHHHHHHHHHHHcC
Confidence 999 78999999999999999999998753
No 54
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=100.00 E-value=1.9e-39 Score=312.95 Aligned_cols=306 Identities=17% Similarity=0.179 Sum_probs=213.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+||||||+||||++|+++|+++|++|+++.|+.+........... ....+++++.+|++|.+++.++++++ |+|
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~--D~V 84 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLEL--QELGDLKIFRADLTDELSFEAPIAGC--DFV 84 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHH--GGGSCEEEEECCTTTSSSSHHHHTTC--SEE
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhc--CCCCcEEEEecCCCChHHHHHHHcCC--CEE
Confidence 68999999999999999999999999999999975432211110011 12357899999999999999999876 999
Q ss_pred EEcccccCchhhccCh-HHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCc-ccCCC-C--CCCCCCCCCCC-------
Q 042406 159 MHLAAQAGVRYAMQNP-NSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSS-VYGVN-K--KVPFSEKDRTD------- 225 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~-~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~-vyg~~-~--~~~~~e~~~~~------- 225 (424)
||+|+.... ...++ +..+++|+.|+.+++++|++.+ ++ +||++||.+ +|+.. . ..+++|+++..
T Consensus 85 ih~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~-r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~ 161 (338)
T 2rh8_A 85 FHVATPVHF--ASEDPENDMIKPAIQGVVNVMKACTRAKSVK-RVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSA 161 (338)
T ss_dssp EEESSCCCC-----------CHHHHHHHHHHHHHHHHCTTCC-EEEEECCHHHHHHHHHTCSCCCCCTTTTTCC------
T ss_pred EEeCCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHHcCCcC-EEEEEecHHHeecCCcCCCCcccChhhccchhhcccc
Confidence 999987532 22333 3489999999999999999986 54 999999987 44321 1 12566665321
Q ss_pred CC-CChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHH-HHHHHHHcCCceeEEecCC---CCcccccc
Q 042406 226 QP-ASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF-FFTRDIIRGKRITVYEAPD---GASVARDF 300 (424)
Q Consensus 226 ~~-~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 300 (424)
.+ ...|+.||.++|.++.++.+.+|+++++|||++||||+........ ..+.....+.... +.... ..+..++|
T Consensus 162 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~ 240 (338)
T 2rh8_A 162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFL-INGMKGMQMLSGSVSI 240 (338)
T ss_dssp -CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHH-HHHHHHHHHHHSSEEE
T ss_pred CCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccc-cccccccccccCcccE
Confidence 11 1269999999999999988778999999999999999764332110 1111223444321 10000 00123489
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCc-ccccccccCCCCCCcccccC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV-KAETKVLPLPRNGDVQFTHA 379 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~ 379 (424)
+|++|+|++++.+++.+.. ++.|+++++ .+|+.|+++.+.+.++. +.+....+ .... ....+
T Consensus 241 i~v~Dva~a~~~~~~~~~~-------------~~~~~~~~~-~~s~~e~~~~l~~~~~~~~~~~~~~~--~~~~-~~~~~ 303 (338)
T 2rh8_A 241 AHVEDVCRAHIFVAEKESA-------------SGRYICCAA-NTSVPELAKFLSKRYPQYKVPTDFGD--FPPK-SKLII 303 (338)
T ss_dssp EEHHHHHHHHHHHHHCTTC-------------CEEEEECSE-EECHHHHHHHHHHHCTTSCCCCCCTT--SCSS-CSCCC
T ss_pred EEHHHHHHHHHHHHcCCCc-------------CCcEEEecC-CCCHHHHHHHHHHhCCCCCCCCCCCC--CCcC-cceee
Confidence 9999999999999875321 157888764 59999999999998762 22211111 1111 22678
Q ss_pred ChHHHHhHcCCcccCCHHHHHHHHHHHHHHH
Q 042406 380 NISLAQRELGYMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 380 d~s~~~~~LG~~p~~~l~~~l~~~v~~~~~~ 410 (424)
|++|+ ++|||+|+++++|+|+++++|+++.
T Consensus 304 d~~k~-~~lG~~p~~~l~~gl~~~~~~~~~~ 333 (338)
T 2rh8_A 304 SSEKL-VKEGFSFKYGIEEIYDESVEYFKAK 333 (338)
T ss_dssp CCHHH-HHHTCCCSCCHHHHHHHHHHHHHHT
T ss_pred chHHH-HHhCCCCCCCHHHHHHHHHHHHHHc
Confidence 99999 6799999999999999999999864
No 55
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=100.00 E-value=3.1e-38 Score=302.17 Aligned_cols=304 Identities=17% Similarity=0.196 Sum_probs=212.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeC-CCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDN-FNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
+|+||||||+||||++|+++|+++|++|++++| +.+...... ..........++.++.+|++|.+++.++++++ |+
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--d~ 77 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVS-FLTNLPGASEKLHFFNADLSNPDSFAAAIEGC--VG 77 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCH-HHHTSTTHHHHEEECCCCTTCGGGGHHHHTTC--SE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHH-HHHhhhccCCceEEEecCCCCHHHHHHHHcCC--CE
Confidence 578999999999999999999999999999998 542211110 01000001135788999999999999999976 99
Q ss_pred EEEcccccCchhhccCh-HHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCccc-CCC-CCCCCCCCCCCC-------C
Q 042406 158 VMHLAAQAGVRYAMQNP-NSYVESNIAGFVNLLETCKSS-DPQPAIVWASSSSVY-GVN-KKVPFSEKDRTD-------Q 226 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~-~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~vy-g~~-~~~~~~e~~~~~-------~ 226 (424)
|||+|+.. .....++ +..+++|+.|+.+++++|++. +++ +||++||.+++ +.. ...+++|+++.. .
T Consensus 78 vih~A~~~--~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~-~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~ 154 (322)
T 2p4h_X 78 IFHTASPI--DFAVSEPEEIVTKRTVDGALGILKACVNSKTVK-RFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVK 154 (322)
T ss_dssp EEECCCCC----------CHHHHHHHHHHHHHHHHHTTCSSCC-EEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHC
T ss_pred EEEcCCcc--cCCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEeccHHHcccCCCCCeecCCccccchhhhcccC
Confidence 99999753 2222333 458999999999999999987 554 99999998754 322 223455654321 1
Q ss_pred CCC-hHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHH-HHHHHHHcCCceeEEecCCCCccccccccHH
Q 042406 227 PAS-LYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYF-FFTRDIIRGKRITVYEAPDGASVARDFTYID 304 (424)
Q Consensus 227 ~~~-~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 304 (424)
|.. .|+.||+++|.++.++.+.+|++++++||++||||......... ..+.....+....+ +. ..++|+|++
T Consensus 155 p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~----~~--~~~~~i~v~ 228 (322)
T 2p4h_X 155 PFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQI----GV--TRFHMVHVD 228 (322)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGC----CE--EEEEEEEHH
T ss_pred cccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccC----cC--CCcCEEEHH
Confidence 223 69999999999999988878999999999999999754321111 11112344544322 12 234899999
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCc-ccccccccCCCCCCcccccCChHH
Q 042406 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV-KAETKVLPLPRNGDVQFTHANISL 383 (424)
Q Consensus 305 Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~d~s~ 383 (424)
|+|++++.+++.+. .. +.|| ++++.+|+.|+++.+.+.++. +.+......... ......+|++|
T Consensus 229 Dva~a~~~~~~~~~------------~~-g~~~-~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~k 293 (322)
T 2p4h_X 229 DVARAHIYLLENSV------------PG-GRYN-CSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIK-GARLPDLNTKK 293 (322)
T ss_dssp HHHHHHHHHHHSCC------------CC-EEEE-CCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCC-CEECCEECCHH
T ss_pred HHHHHHHHHhhCcC------------CC-CCEE-EcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCC-CCcceecccHH
Confidence 99999999986532 11 3488 556789999999999988752 221110000011 11456789999
Q ss_pred HHhHcCCcccCCHHHHHHHHHHHHHHH
Q 042406 384 AQRELGYMPTTDLETGLKKFVRWYLSY 410 (424)
Q Consensus 384 ~~~~LG~~p~~~l~~~l~~~v~~~~~~ 410 (424)
+ ++|||+|+++++++|+++++|+++.
T Consensus 294 ~-~~lG~~p~~~~~~~l~~~~~~~~~~ 319 (322)
T 2p4h_X 294 L-VDAGFDFKYTIEDMFDDAIQCCKEK 319 (322)
T ss_dssp H-HHTTCCCCCCHHHHHHHHHHHHHHH
T ss_pred H-HHhCCccCCCHHHHHHHHHHHHHhc
Confidence 9 6699999999999999999999865
No 56
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=100.00 E-value=8.3e-39 Score=301.13 Aligned_cols=269 Identities=16% Similarity=0.175 Sum_probs=215.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+|||||| ||||++|+++|+++|++|++++|+.+.... ....+++++.+|++|.+ +.+ +|+|
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~~~D~~d~~-----~~~--~d~v 67 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA---------IRASGAEPLLWPGEEPS-----LDG--VTHL 67 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH---------HHHTTEEEEESSSSCCC-----CTT--CCEE
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh---------HhhCCCeEEEecccccc-----cCC--CCEE
Confidence 479999998 999999999999999999999996543211 12257999999999954 554 5999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHh--cCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS--SDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKK 236 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~--~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~ 236 (424)
||+|+..... + ..+.++++++++ .+++ +|||+||.++||.....+++|+++. .|.+.|+.+|+
T Consensus 68 i~~a~~~~~~----~---------~~~~~l~~a~~~~~~~~~-~~v~~Ss~~vyg~~~~~~~~E~~~~-~p~~~Y~~sK~ 132 (286)
T 3ius_A 68 LISTAPDSGG----D---------PVLAALGDQIAARAAQFR-WVGYLSTTAVYGDHDGAWVDETTPL-TPTAARGRWRV 132 (286)
T ss_dssp EECCCCBTTB----C---------HHHHHHHHHHHHTGGGCS-EEEEEEEGGGGCCCTTCEECTTSCC-CCCSHHHHHHH
T ss_pred EECCCccccc----c---------HHHHHHHHHHHhhcCCce-EEEEeecceecCCCCCCCcCCCCCC-CCCCHHHHHHH
Confidence 9999975421 1 125788999988 5655 9999999999998877788888876 78899999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhh
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
++|.+++.+ .+++++++||+++|||+... +..+..+....+. .+++.++|+|++|+|++++.++++
T Consensus 133 ~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~~~~~~----~~~~~~~~i~v~Dva~a~~~~~~~ 198 (286)
T 3ius_A 133 MAEQQWQAV---PNLPLHVFRLAGIYGPGRGP-------FSKLGKGGIRRII----KPGQVFSRIHVEDIAQVLAASMAR 198 (286)
T ss_dssp HHHHHHHHS---TTCCEEEEEECEEEBTTBSS-------STTSSSSCCCEEE----CTTCCBCEEEHHHHHHHHHHHHHS
T ss_pred HHHHHHHhh---cCCCEEEEeccceECCCchH-------HHHHhcCCccccC----CCCcccceEEHHHHHHHHHHHHhC
Confidence 999999887 59999999999999997543 2344567777665 346789999999999999999987
Q ss_pred ccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccccccc-CCCCCC------cccccCChHHHHhHcC
Q 042406 317 AKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP-LPRNGD------VQFTHANISLAQRELG 389 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~-~~~~~~------~~~~~~d~s~~~~~LG 389 (424)
+.. +++||+++++++|+.|+++.+.+.+|.+....... .....+ .....+|++|+++.||
T Consensus 199 ~~~-------------g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG 265 (286)
T 3ius_A 199 PDP-------------GAVYNVCDDEPVPPQDVIAYAAELQGLPLPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELG 265 (286)
T ss_dssp CCT-------------TCEEEECCSCCBCHHHHHHHHHHHHTCCCCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTC
T ss_pred CCC-------------CCEEEEeCCCCccHHHHHHHHHHHcCCCCCcccchhhhccChhHHHhhcCCceeehHHHHHHhC
Confidence 652 27999999999999999999999999876543221 111111 1445689999999999
Q ss_pred CcccC-CHHHHHHHHHHH
Q 042406 390 YMPTT-DLETGLKKFVRW 406 (424)
Q Consensus 390 ~~p~~-~l~~~l~~~v~~ 406 (424)
|+|++ +++++|+++++.
T Consensus 266 ~~p~~p~~~e~l~~~~~~ 283 (286)
T 3ius_A 266 VRLKYPNYRVGLEALQAD 283 (286)
T ss_dssp CCCSCSSHHHHHHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHh
Confidence 99998 799999998864
No 57
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=1e-36 Score=284.76 Aligned_cols=268 Identities=18% Similarity=0.184 Sum_probs=218.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|+||||+||||++++++|++ |++|++++|+.+. . .+ +.+|++|.+++.+++++.++|+||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~----------~----~~---~~~Dl~~~~~~~~~~~~~~~d~vi 62 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI----------Q----GG---YKLDLTDFPRLEDFIIKKRPDVII 62 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC----------T----TC---EECCTTSHHHHHHHHHHHCCSEEE
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC----------C----CC---ceeccCCHHHHHHHHHhcCCCEEE
Confidence 5799999999999999999994 8999999996531 0 12 789999999999999985679999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGE 239 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e 239 (424)
||||.........+++..+++|+.++.+++++|++.+. +||++||.++|+.... +++|+++. .|.+.|+.+|+++|
T Consensus 63 ~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~iv~~SS~~~~~~~~~-~~~e~~~~-~~~~~Y~~sK~~~e 138 (273)
T 2ggs_A 63 NAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS--YIVHISTDYVFDGEKG-NYKEEDIP-NPINYYGLSKLLGE 138 (273)
T ss_dssp ECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC--EEEEEEEGGGSCSSSC-SBCTTSCC-CCSSHHHHHHHHHH
T ss_pred ECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC--eEEEEecceeEcCCCC-CcCCCCCC-CCCCHHHHHHHHHH
Confidence 99998765555677889999999999999999998774 8999999999986543 77787765 67889999999999
Q ss_pred HHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 240 AIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 240 ~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
.+++. ++++++||+.|||+ ..+...++..+..+.++.++ + + .++++|++|+|++++.+++.+..
T Consensus 139 ~~~~~------~~~~~iR~~~v~G~----~~~~~~~~~~~~~~~~~~~~---~--~-~~~~~~~~dva~~i~~~~~~~~~ 202 (273)
T 2ggs_A 139 TFALQ------DDSLIIRTSGIFRN----KGFPIYVYKTLKEGKTVFAF---K--G-YYSPISARKLASAILELLELRKT 202 (273)
T ss_dssp HHHCC------TTCEEEEECCCBSS----SSHHHHHHHHHHTTCCEEEE---S--C-EECCCBHHHHHHHHHHHHHHTCC
T ss_pred HHHhC------CCeEEEeccccccc----cHHHHHHHHHHHcCCCEEee---c--C-CCCceEHHHHHHHHHHHHhcCcC
Confidence 98876 57799999999983 33455566677778777765 2 2 78999999999999999986531
Q ss_pred cCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccC---CCCCCcccccCChHHHHhHcCCcc-cCC
Q 042406 320 STGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPL---PRNGDVQFTHANISLAQRELGYMP-TTD 395 (424)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~---~~~~~~~~~~~d~s~~~~~LG~~p-~~~ 395 (424)
++||+++ +.+|+.|+++.+.+.+|.+.+...... ..........+|++|++++|||+| .++
T Consensus 203 --------------g~~~i~~-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 267 (273)
T 2ggs_A 203 --------------GIIHVAG-ERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLD 267 (273)
T ss_dssp --------------EEEECCC-CCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCC
T ss_pred --------------CeEEECC-CcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCcc
Confidence 6999999 999999999999999998765432111 112223456799999999999999 578
Q ss_pred HHHHH
Q 042406 396 LETGL 400 (424)
Q Consensus 396 l~~~l 400 (424)
+++++
T Consensus 268 l~~~~ 272 (273)
T 2ggs_A 268 LDGMV 272 (273)
T ss_dssp GGGCC
T ss_pred ccccc
Confidence 88765
No 58
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=100.00 E-value=2.6e-35 Score=293.13 Aligned_cols=308 Identities=18% Similarity=0.223 Sum_probs=226.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHH---HHHh------hhhccCCeEEEEccCCCHHH
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLK---KARK------GLLERAGVFVIDADINDKSL 145 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~------~~~~~~~v~~~~~Dl~d~~~ 145 (424)
....+|+||||||+||||++|+++|+++|++|++++|+.+....... .... ......++.++.+|++|.++
T Consensus 65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~ 144 (427)
T 4f6c_A 65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD 144 (427)
T ss_dssp CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence 34567899999999999999999999999999999998763221111 0000 11124689999999999888
Q ss_pred HHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC-----CCCCCCCC
Q 042406 146 LDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV-----NKKVPFSE 220 (424)
Q Consensus 146 v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~-----~~~~~~~e 220 (424)
+. .+. ++|+||||||.... ..+++..+++|+.|+.+++++|++ +. ++||++||.++ |. ....+++|
T Consensus 145 l~-~~~--~~d~Vih~A~~~~~---~~~~~~~~~~Nv~g~~~l~~aa~~-~~-~~~v~~SS~~~-G~~~~~~~~~~~~~E 215 (427)
T 4f6c_A 145 VV-LPE--NMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HH-ARLIYVSTISV-GTYFDIDTEDVTFSE 215 (427)
T ss_dssp CC-CSS--CCSEEEECCCCC----------CHHHHHHHHHHHHHHHHHH-TT-CEEEEEEEGGG-GSEECSSCSCCEECT
T ss_pred CC-CcC--CCCEEEECCcccCC---CCCHHHHHHHHHHHHHHHHHHHHh-cC-CcEEEECchHh-CCCccCCCCCccccc
Confidence 87 444 56999999998642 345678999999999999999999 54 49999999998 53 23456777
Q ss_pred CCCC--CCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC-------CcHHHHHHHHHcCCceeEEecC
Q 042406 221 KDRT--DQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD-------MAYFFFTRDIIRGKRITVYEAP 291 (424)
Q Consensus 221 ~~~~--~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 291 (424)
+++. ..+.+.|+.+|+++|.+++++.+ .|++++++|||+||||..... ..+..++..+..+..++.
T Consensus 216 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 290 (427)
T 4f6c_A 216 ADVYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV---- 290 (427)
T ss_dssp TCSCSSCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH----
T ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC----
Confidence 7752 24789999999999999999865 599999999999999976542 335677778877776654
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCC-
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR- 370 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~- 370 (424)
+.++..++|++++|+|++++.++..+. .+++||+++++++++.|+++.+.+ ++ .+ ..+.+.
T Consensus 291 ~~~~~~~~~v~v~DvA~ai~~~~~~~~-------------~g~~~~l~~~~~~s~~el~~~i~~-~g--~~--~~~~~~~ 352 (427)
T 4f6c_A 291 SMAEMPVDFSFVDTTARQIVALAQVNT-------------PQIIYHVLSPNKMPVKSLLECVKR-KE--IE--LVSDESF 352 (427)
T ss_dssp HHHTCEECCEEHHHHHHHHHHHTTSCC-------------CCSEEEESCSCCEEHHHHHHHHHS-SC--CE--EECHHHH
T ss_pred ccccceEEEeeHHHHHHHHHHHHcCCC-------------CCCEEEecCCCCCcHHHHHHHHHH-cC--Cc--ccCHHHH
Confidence 245788999999999999999998754 128999999999999999999998 55 11 111000
Q ss_pred ------CC------------CcccccCChHHHH---hHcCCcccCCHHHHHHHHHHHHHHHhccC
Q 042406 371 ------NG------------DVQFTHANISLAQ---RELGYMPTTDLETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 371 ------~~------------~~~~~~~d~s~~~---~~LG~~p~~~l~~~l~~~v~~~~~~~~~~ 414 (424)
.+ ......+|+++.. +.+||.+...-++.++++++|+++.+.+.
T Consensus 353 ~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~~~~~ 417 (427)
T 4f6c_A 353 NEILQKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFNKA 417 (427)
T ss_dssp HHHHHHTTCHHHHHHHHHHHTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHhcCchhhhhhhhccccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHhhh
Confidence 00 1112456777665 55799877555779999999999987654
No 59
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=100.00 E-value=2.2e-34 Score=278.19 Aligned_cols=245 Identities=19% Similarity=0.210 Sum_probs=200.6
Q ss_pred CCCCCCCCCCCeEEEEcCCChhHHHHHHHHHhC-CC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHH
Q 042406 70 KSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKR-GD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLD 147 (424)
Q Consensus 70 ~~~~~~~~~~~~vlItGg~G~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~ 147 (424)
++.....+++|+||||||+|+||++++++|+++ |+ +|++++|+........ ......++.++.+|++|.+++.
T Consensus 12 ~~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~-----~~~~~~~v~~~~~Dl~d~~~l~ 86 (344)
T 2gn4_A 12 MPNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMA-----MEFNDPRMRFFIGDVRDLERLN 86 (344)
T ss_dssp ----CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHH-----HHHCCTTEEEEECCTTCHHHHH
T ss_pred CccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHH-----HHhcCCCEEEEECCCCCHHHHH
Confidence 333345578999999999999999999999999 97 9999999643221111 1122368999999999999999
Q ss_pred HHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCC
Q 042406 148 KIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 148 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~ 227 (424)
++++++ |+|||+||.........++...+++|+.|+.+++++|.+.+++ +||++||..++ .|
T Consensus 87 ~~~~~~--D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~-~~V~~SS~~~~---------------~p 148 (344)
T 2gn4_A 87 YALEGV--DICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAIS-QVIALSTDKAA---------------NP 148 (344)
T ss_dssp HHTTTC--SEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCS-EEEEECCGGGS---------------SC
T ss_pred HHHhcC--CEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCC-EEEEecCCccC---------------CC
Confidence 999865 9999999987765566678899999999999999999999876 99999997664 34
Q ss_pred CChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCC-ceeEEecCCCCccccccccH
Q 042406 228 ASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGK-RITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~v 303 (424)
.+.|+.||+++|.+++.++.+ .|+++++||||+||||.+ ..++.+...+..++ ++.+. +++..++|+|+
T Consensus 149 ~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~---~~i~~~~~~~~~g~~~~~i~----~~~~~r~~i~v 221 (344)
T 2gn4_A 149 INLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG---SVVPFFKKLVQNKASEIPIT----DIRMTRFWITL 221 (344)
T ss_dssp CSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT---SHHHHHHHHHHHTCCCEEES----CTTCEEEEECH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC---CHHHHHHHHHHcCCCceEEe----CCCeEEeeEEH
Confidence 589999999999999998764 489999999999999864 35677888888888 77763 56778899999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhC
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILK 358 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g 358 (424)
+|+|++++.+++... .+++|++.++ .+++.|+++.+.+.++
T Consensus 222 ~D~a~~v~~~l~~~~-------------~g~~~~~~~~-~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 222 DEGVSFVLKSLKRMH-------------GGEIFVPKIP-SMKMTDLAKALAPNTP 262 (344)
T ss_dssp HHHHHHHHHHHHHCC-------------SSCEEEECCC-EEEHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHHhhcc-------------CCCEEecCCC-cEEHHHHHHHHHHhCC
Confidence 999999999998753 1279998776 5999999999987554
No 60
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-35 Score=276.84 Aligned_cols=276 Identities=17% Similarity=0.135 Sum_probs=208.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|||||||||||++|+++|+++||+|+++.|++... .+..| +...+.++++ |+||
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~------------------~~~~~----~~~~~~l~~~--d~vi 56 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG------------------RITWD----ELAASGLPSC--DAAV 56 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT------------------EEEHH----HHHHHCCCSC--SEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC------------------eeecc----hhhHhhccCC--CEEE
Confidence 7899999999999999999999999999999954310 11112 2223445544 9999
Q ss_pred EcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhcCCCC-eEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 160 HLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSSDPQP-AIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 160 ~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~-~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
|+|+..... +........+++|+.+|.+|+++++..+.++ +||++||+++||.....+.+|+++. .+.+.|+..
T Consensus 57 hla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~-~~~~~~~~~ 135 (298)
T 4b4o_A 57 NLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPG-GDFDFFSNL 135 (298)
T ss_dssp ECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCC-SCSSHHHHH
T ss_pred EeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCc-cccchhHHH
Confidence 999853221 1222335688999999999999999877543 5899999999999888888888866 677888888
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHh
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGL 314 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 314 (424)
|...|... .....+++++++||+.||||++. .+..+......+....+ +++++.++|||++|+|++++.++
T Consensus 136 ~~~~e~~~--~~~~~~~~~~~~r~~~v~g~~~~---~~~~~~~~~~~~~~~~~----g~g~~~~~~ihv~Dva~a~~~~~ 206 (298)
T 4b4o_A 136 VTKWEAAA--RLPGDSTRQVVVRSGVVLGRGGG---AMGHMLLPFRLGLGGPI----GSGHQFFPWIHIGDLAGILTHAL 206 (298)
T ss_dssp HHHHHHHH--CCSSSSSEEEEEEECEEECTTSH---HHHHHHHHHHTTCCCCB----TTSCSBCCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHH--HhhccCCceeeeeeeeEEcCCCC---chhHHHHHHhcCCccee----cccCceeecCcHHHHHHHHHHHH
Confidence 88777543 22345899999999999999652 34455555556655544 78999999999999999999999
Q ss_pred hhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCC------CCc------ccccCChH
Q 042406 315 DTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRN------GDV------QFTHANIS 382 (424)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~------~~~------~~~~~d~s 382 (424)
+++... ++||+++++++|+.|+++.+.+.+|++..+ |.|.. +.. ......+.
T Consensus 207 ~~~~~~-------------g~yn~~~~~~~t~~e~~~~ia~~lgrp~~~---pvP~~~~~~~~g~~~~~~~l~~~rv~~~ 270 (298)
T 4b4o_A 207 EANHVH-------------GVLNGVAPSSATNAEFAQTFGAALGRRAFI---PLPSAVVQAVFGRQRAIMLLEGQKVIPR 270 (298)
T ss_dssp HCTTCC-------------EEEEESCSCCCBHHHHHHHHHHHHTCCCCC---CBCHHHHHHHHCHHHHHHHHCCCCBCCH
T ss_pred hCCCCC-------------CeEEEECCCccCHHHHHHHHHHHhCcCCcc---cCCHHHHHHHhcchhHHHhhCCCEEcHH
Confidence 876532 699999999999999999999999986532 22210 000 11234567
Q ss_pred HHHhHcCCcccC-CHHHHHHHHHHH
Q 042406 383 LAQRELGYMPTT-DLETGLKKFVRW 406 (424)
Q Consensus 383 ~~~~~LG~~p~~-~l~~~l~~~v~~ 406 (424)
|++ ++||++++ +++++|++.++.
T Consensus 271 kl~-~~Gf~f~yp~l~~al~~l~~~ 294 (298)
T 4b4o_A 271 RTL-ATGYQYSFPELGAALKEIAEN 294 (298)
T ss_dssp HHH-HTTCCCSCCSHHHHHHHHHHC
T ss_pred HHH-HCCCCCCCCCHHHHHHHHHHh
Confidence 775 59999997 699999988873
No 61
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.6e-35 Score=301.15 Aligned_cols=282 Identities=16% Similarity=0.116 Sum_probs=206.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+||||||+||||++|++.|+++|++|++++|+.... ..+.+|+.+. +.+++++ +|+|
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-----------------~~v~~d~~~~--~~~~l~~--~D~V 205 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-----------------GKRFWDPLNP--ASDLLDG--ADVL 205 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-----------------TCEECCTTSC--CTTTTTT--CSEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-----------------cceeecccch--hHHhcCC--CCEE
Confidence 78999999999999999999999999999999965421 1256787753 3455554 4999
Q ss_pred EEcccccCc-hhhccChHHHHHHHHHHHHHHHHH-HHhcCCCCeEEEecCCcccC-CCCCCCCCCCCCCCCCCChHHHHH
Q 042406 159 MHLAAQAGV-RYAMQNPNSYVESNIAGFVNLLET-CKSSDPQPAIVWASSSSVYG-VNKKVPFSEKDRTDQPASLYAATK 235 (424)
Q Consensus 159 i~~Ag~~~~-~~~~~~~~~~~~~N~~g~~~ll~a-~~~~~~~~~~v~~SS~~vyg-~~~~~~~~e~~~~~~~~~~Y~~sK 235 (424)
|||||.... .+...+++.++++|+.|+.+|+++ ++..+++ +||++||.++|| .....+++|+++. +.+.|+.+|
T Consensus 206 ih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~-r~V~~SS~~vyg~~~~~~~~~E~~~~--~~~~y~~~~ 282 (516)
T 3oh8_A 206 VHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCT-TMISASAVGFYGHDRGDEILTEESES--GDDFLAEVC 282 (516)
T ss_dssp EECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCC-EEEEEEEGGGGCSEEEEEEECTTSCC--CSSHHHHHH
T ss_pred EECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCC-EEEEeCcceEecCCCCCCccCCCCCC--CcChHHHHH
Confidence 999998543 233455678999999999999999 5656654 999999999999 4445577777754 678999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhh
Q 042406 236 KAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315 (424)
Q Consensus 236 ~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 315 (424)
...|.++..+ ...|++++++||++||||+. ..+..+...+..+....+ +++++.++|||++|+|++++.+++
T Consensus 283 ~~~E~~~~~~-~~~gi~~~ilRp~~v~Gp~~---~~~~~~~~~~~~g~~~~~----g~g~~~~~~i~v~Dva~ai~~~l~ 354 (516)
T 3oh8_A 283 RDWEHATAPA-SDAGKRVAFIRTGVALSGRG---GMLPLLKTLFSTGLGGKF----GDGTSWFSWIAIDDLTDIYYRAIV 354 (516)
T ss_dssp HHHHHTTHHH-HHTTCEEEEEEECEEEBTTB---SHHHHHHHTTC---CCCC----TTSCCEECEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HhCCCCEEEEEeeEEECCCC---ChHHHHHHHHHhCCCccc----CCCCceEceEeHHHHHHHHHHHHh
Confidence 9999876554 44699999999999999974 344455444444443322 678899999999999999999998
Q ss_pred hccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCC----CCCc-------ccccCChHHH
Q 042406 316 TAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR----NGDV-------QFTHANISLA 384 (424)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~----~~~~-------~~~~~d~s~~ 384 (424)
++.. +++||+++++++|+.|+++.+.+.+|.+..+ ..|... .++. .....+++|+
T Consensus 355 ~~~~-------------~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~-~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl 420 (516)
T 3oh8_A 355 DAQI-------------SGPINAVAPNPVSNADMTKILATSMHRPAFI-QIPSLGPKILLGSQGAEELALASQRTAPAAL 420 (516)
T ss_dssp CTTC-------------CEEEEESCSCCEEHHHHHHHTTC----------------------CCGGGGGGCEEEECCHHH
T ss_pred Cccc-------------CCcEEEECCCCCCHHHHHHHHHHHhCCCCCC-CCCHHHHHHHhCCchhHHHhhcCCeechHHH
Confidence 7542 1689999999999999999999999977522 122110 1111 1223577888
Q ss_pred HhHcCCcccCC-HHHHHHHHHHHH
Q 042406 385 QRELGYMPTTD-LETGLKKFVRWY 407 (424)
Q Consensus 385 ~~~LG~~p~~~-l~~~l~~~v~~~ 407 (424)
+ .|||.|+++ ++++|++++++.
T Consensus 421 ~-~lG~~~~~~~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 421 E-NLSHTFRYTDIGAAIAHELGYE 443 (516)
T ss_dssp H-HTTCCCSCSSHHHHHHHHHTCC
T ss_pred H-HCCCCCCCCCHHHHHHHHhCcc
Confidence 7 699999986 999999998864
No 62
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=100.00 E-value=2.6e-34 Score=270.44 Aligned_cols=261 Identities=18% Similarity=0.164 Sum_probs=203.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC--CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+|+||||+||||++++++|+++ |++|++++|+.+.... +...+++++.+|++|.+++.++++++ |+
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---------l~~~~~~~~~~D~~d~~~l~~~~~~~--d~ 69 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST---------LADQGVEVRHGDYNQPESLQKAFAGV--SK 69 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH---------HHHTTCEEEECCTTCHHHHHHHTTTC--SE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH---------HhhcCCeEEEeccCCHHHHHHHHhcC--CE
Confidence 57999999999999999999999 9999999997643221 11247889999999999999999976 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
|||+|+... . . ++|+.++.+++++|++.+++ +||++||.++|. .+ ..|+.+|.+
T Consensus 70 vi~~a~~~~-----~--~---~~n~~~~~~l~~a~~~~~~~-~~v~~Ss~~~~~--------------~~-~~y~~~K~~ 123 (287)
T 2jl1_A 70 LLFISGPHY-----D--N---TLLIVQHANVVKAARDAGVK-HIAYTGYAFAEE--------------SI-IPLAHVHLA 123 (287)
T ss_dssp EEECCCCCS-----C--H---HHHHHHHHHHHHHHHHTTCS-EEEEEEETTGGG--------------CC-STHHHHHHH
T ss_pred EEEcCCCCc-----C--c---hHHHHHHHHHHHHHHHcCCC-EEEEECCCCCCC--------------CC-CchHHHHHH
Confidence 999998621 1 1 67999999999999999875 999999998863 11 379999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
+|.++++ .|++++++||+.++|+... . ++..++...... + ..++..++|+|++|+|++++.+++.+
T Consensus 124 ~E~~~~~----~~~~~~ilrp~~~~~~~~~-~-----~~~~~~~~~~~~-~---~~~~~~~~~i~~~Dva~~~~~~~~~~ 189 (287)
T 2jl1_A 124 TEYAIRT----TNIPYTFLRNALYTDFFVN-E-----GLRASTESGAIV-T---NAGSGIVNSVTRNELALAAATVLTEE 189 (287)
T ss_dssp HHHHHHH----TTCCEEEEEECCBHHHHSS-G-----GGHHHHHHTEEE-E---SCTTCCBCCBCHHHHHHHHHHHHTSS
T ss_pred HHHHHHH----cCCCeEEEECCEeccccch-h-----hHHHHhhCCcee-c---cCCCCccCccCHHHHHHHHHHHhcCC
Confidence 9998864 5999999999999886421 1 122233223332 2 34677889999999999999999764
Q ss_pred cccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCC----------CCCC-------------c
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP----------RNGD-------------V 374 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~----------~~~~-------------~ 374 (424)
. ..+++||+++++.+|+.|+++.+.+.+|.+.++...|.. .+.. .
T Consensus 190 ~------------~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (287)
T 2jl1_A 190 G------------HENKTYNLVSNQPWTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISK 257 (287)
T ss_dssp S------------CTTEEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHT
T ss_pred C------------CCCcEEEecCCCcCCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhC
Confidence 3 123799999998999999999999999988665443321 0100 0
Q ss_pred ccccCChHHHHhHcCCcccCCHHHHHHHHHH
Q 042406 375 QFTHANISLAQRELGYMPTTDLETGLKKFVR 405 (424)
Q Consensus 375 ~~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~ 405 (424)
.....|++++++.|| |.++++|+|+++++
T Consensus 258 ~~~~~~~~~~~~~lG--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 258 GEASKTSDDLQKLIG--SLTPLKETVKQALK 286 (287)
T ss_dssp TTTCCCCSHHHHHHS--SCCCHHHHHHHHHT
T ss_pred CCCcCCchHHHHHhC--CCCCHHHHHHHHhc
Confidence 234568899999999 66799999999875
No 63
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.9e-34 Score=288.35 Aligned_cols=270 Identities=17% Similarity=0.172 Sum_probs=206.1
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhC---CCeEEEEeCCCCchhhhHHHHHhh-------------hhccCCeEEEEc
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKR---GDGVLGLDNFNNYYETSLKKARKG-------------LLERAGVFVIDA 138 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~v~~~~~ 138 (424)
...++|+||||||+||||++|+++|+++ |++|++++|+.+..... ...... .....++.++.+
T Consensus 69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 147 (478)
T 4dqv_A 69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR-RRLEKTFDSGDPELLRHFKELAADRLEVVAG 147 (478)
T ss_dssp CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHH-HHHHGGGCSSCHHHHHHHHHHHTTTEEEEEC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHH-HHHHHHHHhcchhhhhhhhhhccCceEEEEe
Confidence 4567899999999999999999999999 99999999987643221 111111 112368999999
Q ss_pred cCC------CHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 139 DIN------DKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 139 Dl~------d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
|++ |.+.+.++++++ |+||||||.... .+++..+++|+.|+.+++++|++.+++ +|||+||.++|+.
T Consensus 148 Dl~~~~~gld~~~~~~~~~~~--D~Vih~Aa~~~~----~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~~V~iSS~~v~~~ 220 (478)
T 4dqv_A 148 DKSEPDLGLDQPMWRRLAETV--DLIVDSAAMVNA----FPYHELFGPNVAGTAELIRIALTTKLK-PFTYVSTADVGAA 220 (478)
T ss_dssp CTTSGGGGCCHHHHHHHHHHC--CEEEECCSSCSB----SSCCEEHHHHHHHHHHHHHHHTSSSCC-CEEEEEEGGGGTT
T ss_pred ECCCcccCCCHHHHHHHHcCC--CEEEECccccCC----cCHHHHHHHHHHHHHHHHHHHHhCCCC-eEEEEeehhhcCc
Confidence 998 777899999866 999999998653 455678999999999999999998875 9999999999998
Q ss_pred CCCCCCCCCCCCCCCC-----------ChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC-----CCCcHHHHH
Q 042406 213 NKKVPFSEKDRTDQPA-----------SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR-----PDMAYFFFT 276 (424)
Q Consensus 213 ~~~~~~~e~~~~~~~~-----------~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~-----~~~~~~~~~ 276 (424)
....++.|+++. .+. +.|+.||+++|.++++++++.|++++++|||+|||+... ...++..++
T Consensus 221 ~~~~~~~E~~~~-~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~ 299 (478)
T 4dqv_A 221 IEPSAFTEDADI-RVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMV 299 (478)
T ss_dssp SCTTTCCSSSCH-HHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHH
T ss_pred cCCCCcCCcccc-cccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHH
Confidence 777778877643 222 449999999999999999888999999999999998541 122344455
Q ss_pred HHHHcCCceeE-Eec-CCC---CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc--ccHHHH
Q 042406 277 RDIIRGKRITV-YEA-PDG---ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP--VPVSRL 349 (424)
Q Consensus 277 ~~~~~~~~~~~-~~~-~~~---~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~s~~el 349 (424)
......+..+. +.. .++ ++..++|+|++|+|++++.++........ ..+++||++++++ +|+.|+
T Consensus 300 ~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~--------~~~~~ynv~~~~~~~~s~~el 371 (478)
T 4dqv_A 300 LSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSL--------AGFATYHVMNPHDDGIGLDEY 371 (478)
T ss_dssp HHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCC--------CSEEEEEESCCCCSSCSHHHH
T ss_pred HHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCC--------CCCceEEecCCCCCCcCHHHH
Confidence 44444332221 110 011 26788999999999999999876321111 3348999999888 999999
Q ss_pred HHHHHHHhCcccc
Q 042406 350 VSLLEKILKVKAE 362 (424)
Q Consensus 350 ~~~i~~~~g~~~~ 362 (424)
++.+.+. |.+..
T Consensus 372 ~~~l~~~-g~~~~ 383 (478)
T 4dqv_A 372 VDWLIEA-GYPIR 383 (478)
T ss_dssp HHHHHHT-TCSCE
T ss_pred HHHHHHc-CCCcc
Confidence 9999995 66543
No 64
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=100.00 E-value=2.4e-34 Score=292.35 Aligned_cols=310 Identities=18% Similarity=0.207 Sum_probs=225.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHH---HH------hhhhccCCeEEEEccCCCHHHHH
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKK---AR------KGLLERAGVFVIDADINDKSLLD 147 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~------~~~~~~~~v~~~~~Dl~d~~~v~ 147 (424)
.++|+|||||||||||++|+++|+++|++|++++|+.+........ .. .......++.++.+|++|.+.+.
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 227 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 227 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC
T ss_pred CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC
Confidence 4568999999999999999999999999999999987632211110 00 01123468999999999988777
Q ss_pred HHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC-----CCCCCCCCCC
Q 042406 148 KIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV-----NKKVPFSEKD 222 (424)
Q Consensus 148 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~-----~~~~~~~e~~ 222 (424)
.+. ++|+||||||.... ..+++..+++|+.|+.+++++|++ +. ++|||+||.++ |. ....+++|++
T Consensus 228 -~~~--~~D~Vih~Aa~~~~---~~~~~~~~~~Nv~gt~~ll~~a~~-~~-~~~v~iSS~~v-G~~~~~~~~~~~~~E~~ 298 (508)
T 4f6l_B 228 -LPE--NMDTIIHAGARTDH---FGDDDEFEKVNVQGTVDVIRLAQQ-HH-ARLIYVSTISV-GTYFDIDTEDVTFSEAD 298 (508)
T ss_dssp -CSS--CCSEEEECCCC-----------CCHHHHHHHHHHHHHHHHT-TT-CEEEEEEESCT-TSEECTTCSCCEECTTC
T ss_pred -Ccc--CCCEEEECCceecC---CCCHHHHhhhHHHHHHHHHHHHHh-CC-CcEEEeCChhh-ccCCccCCcCccccccc
Confidence 444 56999999998642 345577889999999999999998 44 49999999999 43 2345677776
Q ss_pred CC--CCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCC-------CcHHHHHHHHHcCCceeEEecCCC
Q 042406 223 RT--DQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPD-------MAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 223 ~~--~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
+. ..+.+.|+.+|+++|.+++.+.+ .|++++++||+.|||+..... ..+..++..+..+..++. +.
T Consensus 299 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~ 373 (508)
T 4f6l_B 299 VYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV----SM 373 (508)
T ss_dssp SCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET----TG
T ss_pred ccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC----Cc
Confidence 52 24679999999999999999865 599999999999999976432 235567777766665544 34
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccccccc------
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP------ 367 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~------ 367 (424)
++..++|+|++|+|++++.++..+. .+++||+++++++++.|+++.+.+.. .+ ....+
T Consensus 374 g~~~~~~v~v~DvA~ai~~~~~~~~-------------~~~~~nl~~~~~~s~~el~~~i~~~~-~~--~~~~~~w~~~l 437 (508)
T 4f6l_B 374 AEMPVDFSFVDTTARQIVALAQVNT-------------PQIIYHVLSPNKMPVKSLLECVKRKE-IE--LVSDESFNEIL 437 (508)
T ss_dssp GGSEEECEEHHHHHHHHHHHTTBCC-------------SCSEEEESCSCEEEHHHHHHHHHSSC-CE--EECHHHHHHHH
T ss_pred cCceEEEEcHHHHHHHHHHHHhCCC-------------CCCEEEeCCCCCCCHHHHHHHHHHcC-Cc--ccCHHHHHHHH
Confidence 6889999999999999999998754 12899999999999999999999754 11 11000
Q ss_pred -CC----------CCCCcccccCChHHHH---hHcCCcccCCHHHHHHHHHHHHHHHhccCCC
Q 042406 368 -LP----------RNGDVQFTHANISLAQ---RELGYMPTTDLETGLKKFVRWYLSYYNSASA 416 (424)
Q Consensus 368 -~~----------~~~~~~~~~~d~s~~~---~~LG~~p~~~l~~~l~~~v~~~~~~~~~~~~ 416 (424)
.. .........+|+++.. +.+||.+....++.++++++|+++.+++.+.
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~~~~~~~ 500 (508)
T 4f6l_B 438 QKQDMYETIGLTSVDREQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTIFNKAAA 500 (508)
T ss_dssp HTTCCHHHHHHHHTGGGSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHHHC----
T ss_pred HhcCCccchhcccccccCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHHHhhh
Confidence 00 0001113456766655 5589987755688999999999998875443
No 65
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=100.00 E-value=7.9e-33 Score=272.39 Aligned_cols=245 Identities=18% Similarity=0.181 Sum_probs=202.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
+++|+||||||+|+||++|+++|+++| ++|++++|+.+............. ....++.++.+|++|.+.+..+++..+
T Consensus 33 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 33 VSQSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HHTCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred hCCCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 568999999999999999999999999 799999996544333222221111 113579999999999999999887678
Q ss_pred ccEEEEcccccCchhhccCh---HHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChH
Q 042406 155 FTHVMHLAAQAGVRYAMQNP---NSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLY 231 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~---~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y 231 (424)
+|+|||+||..+.+ ...++ +..+++|+.|+.+++++|++.+++ +||++||... ..|.+.|
T Consensus 113 ~D~Vih~Aa~~~~~-~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv~-r~V~iSS~~~---------------~~p~~~Y 175 (399)
T 3nzo_A 113 YDYVLNLSALKHVR-SEKDPFTLMRMIDVNVFNTDKTIQQSIDAGAK-KYFCVSTDKA---------------ANPVNMM 175 (399)
T ss_dssp CSEEEECCCCCCGG-GGSSHHHHHHHHHHHTHHHHHHHHHHHHTTCS-EEEEECCSCS---------------SCCCSHH
T ss_pred CCEEEECCCcCCCc-cccCHHHHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEeCCCC---------------CCCcCHH
Confidence 89999999998775 56666 589999999999999999999986 9999999432 2567899
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 232 AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 232 ~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
++||+++|.+++.++.. ++++++|||+|||+.+ ..++.+...+..+.++.++ ++..++|+|++|+|++++
T Consensus 176 g~sK~~~E~~~~~~~~~--~~~~~vR~g~v~G~~~---~~i~~~~~~i~~g~~~~~~-----gd~~r~~v~v~D~a~~~~ 245 (399)
T 3nzo_A 176 GASKRIMEMFLMRKSEE--IAISTARFANVAFSDG---SLLHGFNQRIQKNQPIVAP-----NDIKRYFVTPQESGELCL 245 (399)
T ss_dssp HHHHHHHHHHHHHHTTT--SEEEEECCCEETTCTT---SHHHHHHHHHHTTCCEEEE-----SSCEECEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhh--CCEEEeccceeeCCCC---chHHHHHHHHHhCCCEecC-----CCCeeccCCHHHHHHHHH
Confidence 99999999999998764 8999999999999864 4677888999999998864 357789999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCCCCc---ccHHHHHHHHHHHhCccc
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP---VPVSRLVSLLEKILKVKA 361 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~el~~~i~~~~g~~~ 361 (424)
.++..... +++|++..+++ +|+.|+++.+.+.+|.+.
T Consensus 246 ~a~~~~~~-------------g~i~~l~~g~~~~~~s~~ela~~l~~~~G~~~ 285 (399)
T 3nzo_A 246 MSCIFGEN-------------RDIFFPKLSEALHLISFADIAVKYLKQLGYEP 285 (399)
T ss_dssp HHHHHCCT-------------TEEEEECCCTTCCCEEHHHHHHHHHHHTTCEE
T ss_pred HHhccCCC-------------CCEEEecCCCCCCcccHHHHHHHHHHHhCCCc
Confidence 99976431 27996666666 999999999999999654
No 66
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=100.00 E-value=1.2e-33 Score=265.69 Aligned_cols=261 Identities=16% Similarity=0.125 Sum_probs=197.2
Q ss_pred eEEEEcCCChhHHHHHHHHHhC--CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+||||+||||++++++|+++ |++|++++|+.+.... ....+++++.+|++|.+++.++++++ |+|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~~~D~~d~~~~~~~~~~~--d~v 69 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA---------LAAQGITVRQADYGDEAALTSALQGV--EKL 69 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH---------HHHTTCEEEECCTTCHHHHHHHTTTC--SEE
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh---------hhcCCCeEEEcCCCCHHHHHHHHhCC--CEE
Confidence 4899999999999999999999 9999999997653221 11246889999999999999999976 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||+|+... ..|+.++.+++++|++.+++ +||++||.++|. .+ ..|+.+|.++
T Consensus 70 i~~a~~~~------------~~~~~~~~~l~~a~~~~~~~-~~v~~Ss~~~~~--------------~~-~~y~~sK~~~ 121 (286)
T 2zcu_A 70 LLISSSEV------------GQRAPQHRNVINAAKAAGVK-FIAYTSLLHADT--------------SP-LGLADEHIET 121 (286)
T ss_dssp EECC--------------------CHHHHHHHHHHHHTCC-EEEEEEETTTTT--------------CC-STTHHHHHHH
T ss_pred EEeCCCCc------------hHHHHHHHHHHHHHHHcCCC-EEEEECCCCCCC--------------Cc-chhHHHHHHH
Confidence 99998521 14788999999999998875 999999998872 11 4799999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
|.++++ .+++++++||+.++++... ++..+..+..+. + +.++..++++|++|+|++++.+++.+.
T Consensus 122 e~~~~~----~~~~~~ilrp~~~~~~~~~-------~~~~~~~~~~~~-~---~~~~~~~~~i~~~Dva~~~~~~~~~~~ 186 (286)
T 2zcu_A 122 EKMLAD----SGIVYTLLRNGWYSENYLA-------SAPAALEHGVFI-G---AAGDGKIASATRADYAAAAARVISEAG 186 (286)
T ss_dssp HHHHHH----HCSEEEEEEECCBHHHHHT-------THHHHHHHTEEE-E---SCTTCCBCCBCHHHHHHHHHHHHHSSS
T ss_pred HHHHHH----cCCCeEEEeChHHhhhhHH-------HhHHhhcCCcee-c---cCCCCccccccHHHHHHHHHHHhcCCC
Confidence 998865 4999999999887765211 122333334443 3 456788999999999999999998653
Q ss_pred ccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCC-------CCCc----------------c
Q 042406 319 KSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPR-------NGDV----------------Q 375 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-------~~~~----------------~ 375 (424)
. .+++||+++++.+|+.|+++.+.+.+|.+.++...|... .+.. .
T Consensus 187 ~------------~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (286)
T 2zcu_A 187 H------------EGKVYELAGDSAWTLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKG 254 (286)
T ss_dssp C------------TTCEEEECCSSCBCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTT
T ss_pred C------------CCceEEEeCCCcCCHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCC
Confidence 1 237999999989999999999999999876654433210 0000 1
Q ss_pred cccCChHHHHhHcCCcccCCHHHHHHHHHHHHH
Q 042406 376 FTHANISLAQRELGYMPTTDLETGLKKFVRWYL 408 (424)
Q Consensus 376 ~~~~d~s~~~~~LG~~p~~~l~~~l~~~v~~~~ 408 (424)
....|++++++.||| |.++++|+|+++++||.
T Consensus 255 ~~~~~~~~~~~~lg~-~~~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 255 GLFDDSKTLSKLIGH-PTTTLAESVSHLFNVNN 286 (286)
T ss_dssp TTCCCCCHHHHHHTS-CCCCHHHHHHGGGC---
T ss_pred CCccCchHHHHHhCc-CCCCHHHHHHHHHhhcC
Confidence 245688999999997 44599999999999873
No 67
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=100.00 E-value=4.2e-33 Score=259.62 Aligned_cols=236 Identities=21% Similarity=0.241 Sum_probs=193.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+||||||+||||++|+++|+++|++|++++|+..... ..++.++.+|++|.+++.++++++ |+|
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~~--d~v 67 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA------------EAHEEIVACDLADAQAVHDLVKDC--DGI 67 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC------------CTTEEECCCCTTCHHHHHHHHTTC--SEE
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc------------CCCccEEEccCCCHHHHHHHHcCC--CEE
Confidence 358999999999999999999999999999999654210 136789999999999999999965 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCC-CCCCCCCCCCCCCCCChHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVN-KKVPFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~-~~~~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
|||||... ..+.+..+++|+.++.++++++++.+++ +||++||.++|+.. ...+++|+++. .|.+.|+.+|++
T Consensus 68 i~~a~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS~~~~~~~~~~~~~~E~~~~-~~~~~Y~~sK~~ 141 (267)
T 3ay3_A 68 IHLGGVSV----ERPWNDILQANIIGAYNLYEAARNLGKP-RIVFASSNHTIGYYPRTTRIDTEVPR-RPDSLYGLSKCF 141 (267)
T ss_dssp EECCSCCS----CCCHHHHHHHTHHHHHHHHHHHHHTTCC-EEEEEEEGGGSTTSBTTSCBCTTSCC-CCCSHHHHHHHH
T ss_pred EECCcCCC----CCCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEeCCHHHhCCCCCCCCCCCCCCC-CCCChHHHHHHH
Confidence 99999752 3456789999999999999999998865 99999999999864 34678888766 778999999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
+|.+++.+.+..+++++++||+.+|+... .++..++|+|++|+|++++.+++.+
T Consensus 142 ~e~~~~~~~~~~gi~~~~lrp~~v~~~~~--------------------------~~~~~~~~~~~~dva~~~~~~~~~~ 195 (267)
T 3ay3_A 142 GEDLASLYYHKFDIETLNIRIGSCFPKPK--------------------------DARMMATWLSVDDFMRLMKRAFVAP 195 (267)
T ss_dssp HHHHHHHHHHTTCCCEEEEEECBCSSSCC--------------------------SHHHHHHBCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHcCCCEEEEeceeecCCCC--------------------------CCCeeeccccHHHHHHHHHHHHhCC
Confidence 99999998887899999999999994210 1234678999999999999999875
Q ss_pred cccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCcccCCHH
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDLE 397 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p~~~l~ 397 (424)
.. .+++|++.++. .....|..++ +.|||+|+++++
T Consensus 196 ~~------------~~~~~~~~~~~--------------------------------~~~~~d~~~~-~~lg~~p~~~~~ 230 (267)
T 3ay3_A 196 KL------------GCTVVYGASAN--------------------------------TESWWDNDKS-AFLGWVPQDSSE 230 (267)
T ss_dssp CC------------CEEEEEECCSC--------------------------------SSCCBCCGGG-GGGCCCCCCCGG
T ss_pred CC------------CceeEecCCCc--------------------------------cccccCHHHH-HHcCCCCCCCHH
Confidence 42 12677775432 1134667777 889999999999
Q ss_pred HHHHHHHH
Q 042406 398 TGLKKFVR 405 (424)
Q Consensus 398 ~~l~~~v~ 405 (424)
++++++.+
T Consensus 231 ~~~~~~~~ 238 (267)
T 3ay3_A 231 IWREEIEQ 238 (267)
T ss_dssp GGHHHHHH
T ss_pred HHHHHHHh
Confidence 99987754
No 68
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=100.00 E-value=6.4e-34 Score=277.66 Aligned_cols=251 Identities=23% Similarity=0.385 Sum_probs=207.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
|+||||||+||||++|+++|+++|+ +|++++|+ .|.+++.++++++ |+|
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~----------------------------~d~~~l~~~~~~~--d~V 50 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ----------------------------TKEEELESALLKA--DFI 50 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT----------------------------CCHHHHHHHHHHC--SEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC----------------------------CCHHHHHHHhccC--CEE
Confidence 6899999999999999999999998 88888762 7889999999976 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||+||.... .+++..+++|+.++.+++++|++.+++++||++||.++|+ .+.|+.+|+++
T Consensus 51 ih~a~~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----------------~~~Y~~sK~~~ 110 (369)
T 3st7_A 51 VHLAGVNRP----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----------------DNPYGESKLQG 110 (369)
T ss_dssp EECCCSBCT----TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----------------CSHHHHHHHHH
T ss_pred EECCcCCCC----CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----------------CCCchHHHHHH
Confidence 999997653 3556678899999999999999998766999999999986 37899999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCC--CCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhh
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRP--DMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
|.++++++++.+++++++||+++|||+..+ +.+++.++..+..+.++.+ ++++..++++|++|+|++++.+++.
T Consensus 111 E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~v~Dva~~~~~~l~~ 186 (369)
T 3st7_A 111 EQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQV----NDRNVELTLNYVDDIVAEIKRAIEG 186 (369)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCC----SCTTCEEEEEEHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEe----cCCCeEEEEEEHHHHHHHHHHHHhC
Confidence 999999999889999999999999998765 3577888889999988776 4678899999999999999999987
Q ss_pred ccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCCCCCCcccccCChHHHHhHcCCcccCCH
Q 042406 317 AKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLPRNGDVQFTHANISLAQRELGYMPTTDL 396 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~s~~~~~LG~~p~~~l 396 (424)
+... .+++||+++++.+|+.|+++.+.+.+|.+......+.+ + ...-......|||.|..++
T Consensus 187 ~~~~-----------~~~~~~i~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~---~----~~~~~l~~~~l~~~p~~~~ 248 (369)
T 3st7_A 187 TPTI-----------ENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLD---N----LFEKDLYSTYLSYLPSTDF 248 (369)
T ss_dssp CCCE-----------ETTEECCSCCEEEEHHHHHHHHHHHHHHHHHTCCCCTT---S----HHHHHHHHHHHHTSCTTCS
T ss_pred Cccc-----------CCceEEeCCCCceeHHHHHHHHHHHhCCCcccccCCCC---C----HHHHHHHHHHhcccCCcce
Confidence 6531 13899999999999999999999999987544322211 0 0111333445899988776
Q ss_pred HHHHHH
Q 042406 397 ETGLKK 402 (424)
Q Consensus 397 ~~~l~~ 402 (424)
+++++.
T Consensus 249 ~~~l~~ 254 (369)
T 3st7_A 249 SYPLLM 254 (369)
T ss_dssp CCCCCE
T ss_pred eechhh
Confidence 655543
No 69
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.1e-33 Score=255.14 Aligned_cols=224 Identities=13% Similarity=0.114 Sum_probs=175.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+|+||||+||||++++++|+++|++|++++|+.+.... ...+++++.+|++|.+++.++++++ |+|
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~~~--d~v 71 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI----------ENEHLKVKKADVSSLDEVCEVCKGA--DAV 71 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC----------CCTTEEEECCCTTCHHHHHHHHTTC--SEE
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh----------ccCceEEEEecCCCHHHHHHHhcCC--CEE
Confidence 5899999999999999999999999999999996543211 1268999999999999999999966 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||+||... . ....+++|+.++.+++++|++.+++ +||++||.++|+..... ..++++. .|.+.|+.+|.++
T Consensus 72 i~~a~~~~-----~-~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~~~~~~-~~~~~~~-~p~~~Y~~sK~~~ 142 (227)
T 3dhn_A 72 ISAFNPGW-----N-NPDIYDETIKVYLTIIDGVKKAGVN-RFLMVGGAGSLFIAPGL-RLMDSGE-VPENILPGVKALG 142 (227)
T ss_dssp EECCCC------------CCSHHHHHHHHHHHHHHHTTCS-EEEEECCSTTSEEETTE-EGGGTTC-SCGGGHHHHHHHH
T ss_pred EEeCcCCC-----C-ChhHHHHHHHHHHHHHHHHHHhCCC-EEEEeCChhhccCCCCC-ccccCCc-chHHHHHHHHHHH
Confidence 99998642 1 2237889999999999999999876 99999999987654332 2333333 6778999999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
|.+++.++++.+++++++||+.+|||+.....+. .+....+. .++. ++|+|++|+|++++.+++++.
T Consensus 143 e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~--------~~~~~~~~----~~~~-~~~i~~~Dva~ai~~~l~~~~ 209 (227)
T 3dhn_A 143 EFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR--------LGKDDMIV----DIVG-NSHISVEDYAAAMIDELEHPK 209 (227)
T ss_dssp HHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE--------EESSBCCC----CTTS-CCEEEHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHhhccCccEEEEeCCcccCCCcccccee--------ecCCCccc----CCCC-CcEEeHHHHHHHHHHHHhCcc
Confidence 9999999877899999999999999976543211 22222222 1222 899999999999999999876
Q ss_pred ccCCCCCCCCCCCCcceEEcCCCCcccHHH
Q 042406 319 KSTGSGGKKKGPAEFRIFNLGNTTPVPVSR 348 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e 348 (424)
..+++|+++++++.++++
T Consensus 210 ------------~~g~~~~~~~~~~~~~~~ 227 (227)
T 3dhn_A 210 ------------HHQERFTIGYLEHHHHHH 227 (227)
T ss_dssp ------------CCSEEEEEECCSCCC---
T ss_pred ------------ccCcEEEEEeehhcccCC
Confidence 344999999999988753
No 70
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=100.00 E-value=1.8e-31 Score=248.67 Aligned_cols=211 Identities=19% Similarity=0.185 Sum_probs=178.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++|+||||||+||||++|+++|+++|++|++++|+..... ..+++++.+|++|.+++.++++++ |+
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~------------~~~~~~~~~Dl~d~~~~~~~~~~~--D~ 67 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA------------GPNEECVQCDLADANAVNAMVAGC--DG 67 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC------------CTTEEEEECCTTCHHHHHHHHTTC--SE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc------------CCCCEEEEcCCCCHHHHHHHHcCC--CE
Confidence 4678999999999999999999999999999999764321 357899999999999999999966 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC-CCCCCCCCCCCCCCCCChHHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV-NKKVPFSEKDRTDQPASLYAATKK 236 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~-~~~~~~~e~~~~~~~~~~Y~~sK~ 236 (424)
||||||.. ...+.+..+++|+.|+.++++++++.+.+ +||++||.++||. ....+++|+.+. .+.+.|+.||+
T Consensus 68 vi~~Ag~~----~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~iv~~SS~~~~g~~~~~~~~~e~~~~-~~~~~Y~~sK~ 141 (267)
T 3rft_A 68 IVHLGGIS----VEKPFEQILQGNIIGLYNLYEAARAHGQP-RIVFASSNHTIGYYPQTERLGPDVPA-RPDGLYGVSKC 141 (267)
T ss_dssp EEECCSCC----SCCCHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEEEEGGGGTTSBTTSCBCTTSCC-CCCSHHHHHHH
T ss_pred EEECCCCc----CcCCHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEEcchHHhCCCCCCCCCCCCCCC-CCCChHHHHHH
Confidence 99999984 24567889999999999999999998865 9999999999984 344567776655 78899999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhh
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
++|.+++.+++++++++++|||+.|||+. .+++..++|++++|+++++..+++.
T Consensus 142 ~~e~~~~~~a~~~g~~~~~vr~~~v~~~~--------------------------~~~~~~~~~~~~~d~a~~~~~~~~~ 195 (267)
T 3rft_A 142 FGENLARMYFDKFGQETALVRIGSCTPEP--------------------------NNYRMLSTWFSHDDFVSLIEAVFRA 195 (267)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECBCSSSC--------------------------CSTTHHHHBCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCeEEEEEeecccCCC--------------------------CCCCceeeEEcHHHHHHHHHHHHhC
Confidence 99999999998899999999999999872 2345667899999999999999887
Q ss_pred ccccCCCCCCCCCCCCcceEEcCCCCcccH
Q 042406 317 AKKSTGSGGKKKGPAEFRIFNLGNTTPVPV 346 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~ 346 (424)
+... +.++++.++++.++
T Consensus 196 ~~~~------------~~~~~~~s~~~~~~ 213 (267)
T 3rft_A 196 PVLG------------CPVVWGASANDAGW 213 (267)
T ss_dssp SCCC------------SCEEEECCCCTTCC
T ss_pred CCCC------------ceEEEEeCCCCCCc
Confidence 6521 25777777664443
No 71
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=100.00 E-value=4e-32 Score=262.64 Aligned_cols=288 Identities=15% Similarity=0.096 Sum_probs=201.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+++|+||||||||+||++|++.|+++|++|++++|+.+....... ....+...+++++.+|++|.+++.+++++.++|
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~--~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d 85 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK--IFKALEDKGAIIVYGLINEQEAMEKILKEHEID 85 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH--HHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCC
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH--HHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCC
Confidence 446789999999999999999999999999999997633211111 111223468999999999999999999955569
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK 235 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK 235 (424)
+|||+|+.. |+.++.+++++|++.+ ++ +||+ | +||. +.+|.++. .|.+.|+.+|
T Consensus 86 ~Vi~~a~~~---------------n~~~~~~l~~aa~~~g~v~-~~v~-S---~~g~----~~~e~~~~-~p~~~y~~sK 140 (346)
T 3i6i_A 86 IVVSTVGGE---------------SILDQIALVKAMKAVGTIK-RFLP-S---EFGH----DVNRADPV-EPGLNMYREK 140 (346)
T ss_dssp EEEECCCGG---------------GGGGHHHHHHHHHHHCCCS-EEEC-S---CCSS----CTTTCCCC-TTHHHHHHHH
T ss_pred EEEECCchh---------------hHHHHHHHHHHHHHcCCce-EEee-c---ccCC----CCCccCcC-CCcchHHHHH
Confidence 999999862 7788999999999998 65 7775 4 4553 23343433 5678999999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhh
Q 042406 236 KAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315 (424)
Q Consensus 236 ~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 315 (424)
+++|.++++ .|++++++|||.++|..... ... .......+..+.++ ++++..++|+|++|+|++++.++.
T Consensus 141 ~~~e~~l~~----~g~~~tivrpg~~~g~~~~~-~~~--~~~~~~~~~~~~~~---g~g~~~~~~i~~~Dva~~~~~~l~ 210 (346)
T 3i6i_A 141 RRVRQLVEE----SGIPFTYICCNSIASWPYYN-NIH--PSEVLPPTDFFQIY---GDGNVKAYFVAGTDIGKFTMKTVD 210 (346)
T ss_dssp HHHHHHHHH----TTCCBEEEECCEESSCCCSC-C-------CCCCSSCEEEE---TTSCCCEEEECHHHHHHHHHHHTT
T ss_pred HHHHHHHHH----cCCCEEEEEecccccccCcc-ccc--cccccCCCceEEEc---cCCCceEEecCHHHHHHHHHHHHh
Confidence 999998876 49999999999999975332 110 11111245556665 688899999999999999999998
Q ss_pred hccccCCCCCCCCCCCCcceEEcCC-CCcccHHHHHHHHHHHhCcccccccccCCC-------CCCc-------------
Q 042406 316 TAKKSTGSGGKKKGPAEFRIFNLGN-TTPVPVSRLVSLLEKILKVKAETKVLPLPR-------NGDV------------- 374 (424)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~~~~-------~~~~------------- 374 (424)
.+.. .+++|++++ ++.+|+.|+++.+++.+|.+.+....+... ....
T Consensus 211 ~~~~------------~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 278 (346)
T 3i6i_A 211 DVRT------------LNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIFI 278 (346)
T ss_dssp CGGG------------TTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHHHHHHHTCCTTHHHHHHHHHHHHT
T ss_pred Cccc------------cCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHHHHHHhcCCChhhhHHHHHHHHhc
Confidence 7642 237899985 588999999999999999887665443210 0000
Q ss_pred --ccccCCh-----HHHHhH-cCCcccCCHHHHHHHHHHHHHHHhccC
Q 042406 375 --QFTHANI-----SLAQRE-LGYMPTTDLETGLKKFVRWYLSYYNSA 414 (424)
Q Consensus 375 --~~~~~d~-----s~~~~~-LG~~p~~~l~~~l~~~v~~~~~~~~~~ 414 (424)
....++. .++... -+++++ +++|.|+++++|++++++..
T Consensus 279 ~g~~~~~~~~~~~~~~~~~~~p~~~~t-~~~e~l~~~~~~~~~~~~~~ 325 (346)
T 3i6i_A 279 KGCQVNFSIDGPEDVEVTTLYPEDSFR-TVEECFGEYIVKMEEKQPTA 325 (346)
T ss_dssp TCTTTSSCCCSTTEEEHHHHSTTCCCC-CHHHHHHHHHCC--------
T ss_pred cCCCcccccCCCCcccHHHhCCCCCcC-cHHHHHHHHHHHhhcccccc
Confidence 0000111 122332 344554 89999999999999876553
No 72
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=99.97 E-value=1.5e-31 Score=244.48 Aligned_cols=220 Identities=16% Similarity=0.168 Sum_probs=171.4
Q ss_pred CCCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCe-EEEEccCCCHHHHHHHhh
Q 042406 73 RPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGV-FVIDADINDKSLLDKIFN 151 (424)
Q Consensus 73 ~~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~v~~~~~ 151 (424)
....+++|+|+||||+|+||++++++|+++|++|++++|+.+.... ....++ +++.+|++ +++.+++.
T Consensus 15 ~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~---------~~~~~~~~~~~~Dl~--~~~~~~~~ 83 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE---------LRERGASDIVVANLE--EDFSHAFA 83 (236)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH---------HHHTTCSEEEECCTT--SCCGGGGT
T ss_pred cccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH---------HHhCCCceEEEcccH--HHHHHHHc
Confidence 3456789999999999999999999999999999999997553221 112478 99999999 77778887
Q ss_pred ccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChH
Q 042406 152 VVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLY 231 (424)
Q Consensus 152 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y 231 (424)
++ |+||||||... ..+++..+++|+.++.+++++|++.+.+ +||++||.+.+.. +..+ .+...|
T Consensus 84 ~~--D~vi~~ag~~~----~~~~~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS~~~~~~-------~~~~--~~~~~Y 147 (236)
T 3e8x_A 84 SI--DAVVFAAGSGP----HTGADKTILIDLWGAIKTIQEAEKRGIK-RFIMVSSVGTVDP-------DQGP--MNMRHY 147 (236)
T ss_dssp TC--SEEEECCCCCT----TSCHHHHHHTTTHHHHHHHHHHHHHTCC-EEEEECCTTCSCG-------GGSC--GGGHHH
T ss_pred CC--CEEEECCCCCC----CCCccccchhhHHHHHHHHHHHHHcCCC-EEEEEecCCCCCC-------CCCh--hhhhhH
Confidence 55 99999999754 3567889999999999999999999875 9999999555432 1111 356889
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 232 AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 232 ~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
+.+|.++|.+++ ..|+++++||||.+||+.... .+... ...+..+++++++|+|++++
T Consensus 148 ~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~---------------~~~~~---~~~~~~~~~i~~~Dva~~~~ 205 (236)
T 3e8x_A 148 LVAKRLADDELK----RSSLDYTIVRPGPLSNEESTG---------------KVTVS---PHFSEITRSITRHDVAKVIA 205 (236)
T ss_dssp HHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCS---------------EEEEE---SSCSCCCCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCC---------------eEEec---cCCCcccCcEeHHHHHHHHH
Confidence 999999999876 459999999999999985421 12222 23455688999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHH
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLE 354 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~ 354 (424)
.+++.+.. .+++|+++++ .+++.|+++.+.
T Consensus 206 ~~~~~~~~------------~g~~~~v~~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 206 ELVDQQHT------------IGKTFEVLNG-DTPIAKVVEQLG 235 (236)
T ss_dssp HHTTCGGG------------TTEEEEEEEC-SEEHHHHHHTC-
T ss_pred HHhcCccc------------cCCeEEEeCC-CcCHHHHHHHhc
Confidence 99987652 2389999988 499999998765
No 73
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=99.97 E-value=4.3e-30 Score=241.94 Aligned_cols=258 Identities=14% Similarity=0.148 Sum_probs=188.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
|+||||||||+||++++++|+++ |++|++++|+.+... .+...+++++.+|++|++++.++++++ |+|
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~---------~~~~~~v~~~~~D~~d~~~l~~~~~~~--d~v 69 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVP---------DDWRGKVSVRQLDYFNQESMVEAFKGM--DTV 69 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSC---------GGGBTTBEEEECCTTCHHHHHHHTTTC--SEE
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHH---------HhhhCCCEEEEcCCCCHHHHHHHHhCC--CEE
Confidence 67999999999999999999998 999999999654321 123468999999999999999999976 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||+|+..... ..|+.++.+++++|++.+++ +||++||.+. ... .+ ..+...+..+
T Consensus 70 i~~a~~~~~~----------~~~~~~~~~l~~aa~~~gv~-~iv~~Ss~~~---~~~----------~~-~~~~~~~~~~ 124 (289)
T 3e48_A 70 VFIPSIIHPS----------FKRIPEVENLVYAAKQSGVA-HIIFIGYYAD---QHN----------NP-FHMSPYFGYA 124 (289)
T ss_dssp EECCCCCCSH----------HHHHHHHHHHHHHHHHTTCC-EEEEEEESCC---STT----------CC-STTHHHHHHH
T ss_pred EEeCCCCccc----------hhhHHHHHHHHHHHHHcCCC-EEEEEcccCC---CCC----------CC-CccchhHHHH
Confidence 9999874321 34889999999999999976 9999999432 111 11 1122222333
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
|..+ ...|++++++||+.+||+. . .++..+....... + +.++..++|++++|+|++++.++..+.
T Consensus 125 e~~~----~~~g~~~~ilrp~~~~~~~------~-~~~~~~~~~~~~~-~---~~g~~~~~~i~~~Dva~~~~~~l~~~~ 189 (289)
T 3e48_A 125 SRLL----STSGIDYTYVRMAMYMDPL------K-PYLPELMNMHKLI-Y---PAGDGRINYITRNDIARGVIAIIKNPD 189 (289)
T ss_dssp HHHH----HHHCCEEEEEEECEESTTH------H-HHHHHHHHHTEEC-C---CCTTCEEEEECHHHHHHHHHHHHHCGG
T ss_pred HHHH----HHcCCCEEEEecccccccc------H-HHHHHHHHCCCEe-c---CCCCceeeeEEHHHHHHHHHHHHcCCC
Confidence 4333 3459999999999999972 1 2333333333332 2 356888999999999999999998865
Q ss_pred ccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCC-------C-CCC------------ccccc
Q 042406 319 KSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP-------R-NGD------------VQFTH 378 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~-------~-~~~------------~~~~~ 378 (424)
.. +++||++ ++.+|+.|+++.+.+.+|.+..+...+.. . .+. .....
T Consensus 190 ~~------------g~~~~~~-~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~ 256 (289)
T 3e48_A 190 TW------------GKRYLLS-GYSYDMKELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLD 256 (289)
T ss_dssp GT------------TCEEEEC-CEEEEHHHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTC
T ss_pred cC------------CceEEeC-CCcCCHHHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCcc
Confidence 32 3899999 99999999999999999988765443311 0 110 01122
Q ss_pred CChHHHHhHcCCcccCCHHHHHHH
Q 042406 379 ANISLAQRELGYMPTTDLETGLKK 402 (424)
Q Consensus 379 ~d~s~~~~~LG~~p~~~l~~~l~~ 402 (424)
.+.+..++.+|+.|+ ++++.+++
T Consensus 257 ~~~~~~~~~~G~~p~-~~~~~~~~ 279 (289)
T 3e48_A 257 QESNDFKQLVNDQPQ-TLQSFLQE 279 (289)
T ss_dssp CCCSHHHHHHSSCCC-CHHHHHHC
T ss_pred ccCchHHHHhCCCCC-CHHHHHHH
Confidence 455667788999888 88876644
No 74
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=99.97 E-value=1.1e-31 Score=242.59 Aligned_cols=209 Identities=11% Similarity=0.111 Sum_probs=169.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-HHHHHHHhhccCccEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-KSLLDKIFNVVAFTHV 158 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~v~~~~~~~~~d~v 158 (424)
|+|+||||+|+||++++++|+++|++|++++|+.+.... ..+++++++|++| .+++.++++++ |+|
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-----------~~~~~~~~~D~~d~~~~~~~~~~~~--d~v 67 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ-----------YNNVKAVHFDVDWTPEEMAKQLHGM--DAI 67 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC-----------CTTEEEEECCTTSCHHHHHTTTTTC--SEE
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh-----------cCCceEEEecccCCHHHHHHHHcCC--CEE
Confidence 689999999999999999999999999999996542211 1689999999999 99999999966 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
|||||... ...+++|+.++.+++++|++.+++ +||++||.++++.. ++.| + +..+.+.|+.+|.++
T Consensus 68 i~~ag~~~--------~~~~~~n~~~~~~l~~a~~~~~~~-~iv~~SS~~~~~~~---~~~e-~-~~~~~~~Y~~sK~~~ 133 (219)
T 3dqp_A 68 INVSGSGG--------KSLLKVDLYGAVKLMQAAEKAEVK-RFILLSTIFSLQPE---KWIG-A-GFDALKDYYIAKHFA 133 (219)
T ss_dssp EECCCCTT--------SSCCCCCCHHHHHHHHHHHHTTCC-EEEEECCTTTTCGG---GCCS-H-HHHHTHHHHHHHHHH
T ss_pred EECCcCCC--------CCcEeEeHHHHHHHHHHHHHhCCC-EEEEECcccccCCC---cccc-c-ccccccHHHHHHHHH
Confidence 99999754 125678999999999999999876 99999998877642 2333 2 224578999999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
|.+++ +..++++++|||+.+||+..... +.. ++..+++++++|+|++++.+++++.
T Consensus 134 e~~~~---~~~~i~~~ilrp~~v~g~~~~~~---------------~~~------~~~~~~~i~~~Dva~~i~~~l~~~~ 189 (219)
T 3dqp_A 134 DLYLT---KETNLDYTIIQPGALTEEEATGL---------------IDI------NDEVSASNTIGDVADTIKELVMTDH 189 (219)
T ss_dssp HHHHH---HSCCCEEEEEEECSEECSCCCSE---------------EEE------SSSCCCCEEHHHHHHHHHHHHTCGG
T ss_pred HHHHH---hccCCcEEEEeCceEecCCCCCc---------------ccc------CCCcCCcccHHHHHHHHHHHHhCcc
Confidence 99886 45699999999999999854321 111 2567889999999999999998765
Q ss_pred ccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHH
Q 042406 319 KSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSL 352 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~ 352 (424)
. .+++||+++++ .++.|+.+.
T Consensus 190 ~------------~g~~~~i~~g~-~~~~e~~~~ 210 (219)
T 3dqp_A 190 S------------IGKVISMHNGK-TAIKEALES 210 (219)
T ss_dssp G------------TTEEEEEEECS-EEHHHHHHT
T ss_pred c------------cCcEEEeCCCC-ccHHHHHHH
Confidence 2 23899998875 999998764
No 75
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=99.97 E-value=9.9e-30 Score=238.68 Aligned_cols=254 Identities=15% Similarity=0.089 Sum_probs=187.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|+++||||+|+||++++++|+++|++|++++|+.+..................+.++.+|++|.++++++++.+
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 86 (281)
T 3svt_A 7 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVT 86 (281)
T ss_dssp -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999765544443333322111237899999999999999998866
Q ss_pred ----CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHhcC---CCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKSSD---PQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++.... ...+||++||...+...
T Consensus 87 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 158 (281)
T 3svt_A 87 AWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH-------- 158 (281)
T ss_dssp HHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC--------
T ss_pred HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC--------
Confidence 78999999997322 11223346799999999999988765432 12389999998876431
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|+++..........+...+....+ ..
T Consensus 159 ----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p------------~~ 222 (281)
T 3svt_A 159 ----RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTP------------LP 222 (281)
T ss_dssp ----TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCS------------SS
T ss_pred ----CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCC------------CC
Confidence 446889999999999999998875 69999999999998743210000112222222222 12
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc-HHHHHHHHHHHhCcccc
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP-VSRLVSLLEKILKVKAE 362 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s-~~el~~~i~~~~g~~~~ 362 (424)
.+.+++|+|++++.++...... ..|++|++.+|...+ ..++.+++.+.++.+..
T Consensus 223 r~~~~~dva~~~~~l~s~~~~~----------itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~ 277 (281)
T 3svt_A 223 RQGEVEDVANMAMFLLSDAASF----------VTGQVINVDGGQMLRRGPDFSAMLEPVFGRDAL 277 (281)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGSCCCCCHHHHHHHHCTTGG
T ss_pred CCCCHHHHHHHHHHHhCcccCC----------CCCCEEEeCCChhcccCCcchhccccccCCccc
Confidence 3678999999999988765432 345899999988777 78899999999887643
No 76
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=99.97 E-value=7.4e-30 Score=241.59 Aligned_cols=236 Identities=16% Similarity=0.108 Sum_probs=179.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
+|+|+||||+|+||++++++|+++| ++|++++|+.+.... ..+...+++++.+|++|++++.++++++ |+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-------~~l~~~~~~~~~~D~~d~~~l~~~~~~~--d~ 75 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-------KELRLQGAEVVQGDQDDQVIMELALNGA--YA 75 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-------HHHHHTTCEEEECCTTCHHHHHHHHTTC--SE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-------HHHHHCCCEEEEecCCCHHHHHHHHhcC--CE
Confidence 5789999999999999999999999 999999997653211 1112357899999999999999999976 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKA 237 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~ 237 (424)
|||+|+.... . ....|+.++.+++++|++.+++ +||++||.++|+.... .+...|+.+|.+
T Consensus 76 vi~~a~~~~~----~----~~~~~~~~~~~~~~aa~~~gv~-~iv~~S~~~~~~~~~~----------~~~~~y~~sK~~ 136 (299)
T 2wm3_A 76 TFIVTNYWES----C----SQEQEVKQGKLLADLARRLGLH-YVVYSGLENIKKLTAG----------RLAAAHFDGKGE 136 (299)
T ss_dssp EEECCCHHHH----T----CHHHHHHHHHHHHHHHHHHTCS-EEEECCCCCHHHHTTT----------SCCCHHHHHHHH
T ss_pred EEEeCCCCcc----c----cchHHHHHHHHHHHHHHHcCCC-EEEEEcCccccccCCC----------cccCchhhHHHH
Confidence 9999985211 0 1356788999999999999876 9999988888763211 234789999999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHH-HHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhh
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRD-IIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
+|.++++ .|+++++|||+.+||+.... +... ...+....+ .. ..++..++|+|++|+|++++.++..
T Consensus 137 ~e~~~~~----~gi~~~ilrp~~~~~~~~~~------~~~~~~~~g~~~~~-~~-~~~~~~~~~i~~~Dva~~~~~~l~~ 204 (299)
T 2wm3_A 137 VEEYFRD----IGVPMTSVRLPCYFENLLSH------FLPQKAPDGKSYLL-SL-PTGDVPMDGMSVSDLGPVVLSLLKM 204 (299)
T ss_dssp HHHHHHH----HTCCEEEEECCEEGGGGGTT------TCCEECTTSSSEEE-CC-CCTTSCEEEECGGGHHHHHHHHHHS
T ss_pred HHHHHHH----CCCCEEEEeecHHhhhchhh------cCCcccCCCCEEEE-Ee-cCCCCccceecHHHHHHHHHHHHcC
Confidence 9998875 39999999999999974321 1111 112222121 11 2367788999999999999999986
Q ss_pred ccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccc
Q 042406 317 AKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVL 366 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~ 366 (424)
+... .+++|++++ +.+|+.|+++.+.+.+|.+.++...
T Consensus 205 ~~~~-----------~g~~~~~~g-~~~s~~e~~~~~~~~~g~~~~~~~~ 242 (299)
T 2wm3_A 205 PEKY-----------VGQNIGLST-CRHTAEEYAALLTKHTRKVVHDAKM 242 (299)
T ss_dssp HHHH-----------TTCEEECCS-EEECHHHHHHHHHHHHSSCEEECCC
T ss_pred hhhh-----------CCeEEEeee-ccCCHHHHHHHHHHHHCCCceeEec
Confidence 5321 127999986 6799999999999999988765443
No 77
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=99.97 E-value=1.1e-29 Score=229.92 Aligned_cols=218 Identities=11% Similarity=0.015 Sum_probs=159.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+||||||+|+||++|+++|+++|++|++++|+.+.. ......+++++.+|++|.++ +.+.++ |+||
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---------~~~~~~~~~~~~~D~~d~~~--~~~~~~--d~vi 67 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA---------ADRLGATVATLVKEPLVLTE--ADLDSV--DAVV 67 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH---------HHHTCTTSEEEECCGGGCCH--HHHTTC--SEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccc---------ccccCCCceEEecccccccH--hhcccC--CEEE
Confidence 6799999999999999999999999999999954321 11233689999999999888 777765 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCC---CCCCCCCCCCCCCChHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKK---VPFSEKDRTDQPASLYAATKK 236 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~---~~~~e~~~~~~~~~~Y~~sK~ 236 (424)
||||.... . ....+|+.++.+++++|++.+ + +||++||++.+..... .+.+++..+ .|.+.|+.+|.
T Consensus 68 ~~ag~~~~---~----~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~~~~~~~~~~~~~~~~~~~~-~~~~~y~~sK~ 137 (224)
T 3h2s_A 68 DALSVPWG---S----GRGYLHLDFATHLVSLLRNSD-T-LAVFILGSASLAMPGADHPMILDFPESA-ASQPWYDGALY 137 (224)
T ss_dssp ECCCCCTT---S----SCTHHHHHHHHHHHHTCTTCC-C-EEEEECCGGGSBCTTCSSCGGGGCCGGG-GGSTTHHHHHH
T ss_pred ECCccCCC---c----chhhHHHHHHHHHHHHHHHcC-C-cEEEEecceeeccCCCCccccccCCCCC-ccchhhHHHHH
Confidence 99998521 1 124689999999999999998 4 9999999866543322 123333322 45789999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhh
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
++|.+ ..+.+..++++++|||+.+|||+.... +. .....+. ..+..+++++++|+|++++.++++
T Consensus 138 ~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~~~-~~-------~~~~~~~------~~~~~~~~i~~~DvA~~~~~~l~~ 202 (224)
T 3h2s_A 138 QYYEY-QFLQMNANVNWIGISPSEAFPSGPATS-YV-------AGKDTLL------VGEDGQSHITTGNMALAILDQLEH 202 (224)
T ss_dssp HHHHH-HHHTTCTTSCEEEEEECSBCCCCCCCC-EE-------EESSBCC------CCTTSCCBCCHHHHHHHHHHHHHS
T ss_pred HHHHH-HHHHhcCCCcEEEEcCccccCCCcccC-ce-------ecccccc------cCCCCCceEeHHHHHHHHHHHhcC
Confidence 99954 555556699999999999999944322 10 1111111 234456899999999999999998
Q ss_pred ccccCCCCCCCCCCCCcceEEcCCCCcccHH
Q 042406 317 AKKSTGSGGKKKGPAEFRIFNLGNTTPVPVS 347 (424)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~ 347 (424)
+. ..+++|++++.+..+..
T Consensus 203 ~~------------~~g~~~~~~~~~~~~~~ 221 (224)
T 3h2s_A 203 PT------------AIRDRIVVRDADLEHHH 221 (224)
T ss_dssp CC------------CTTSEEEEEECC-----
T ss_pred cc------------ccCCEEEEecCcchhcc
Confidence 75 23489999987655544
No 78
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=99.97 E-value=1.3e-29 Score=233.53 Aligned_cols=233 Identities=18% Similarity=0.161 Sum_probs=173.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
+++|+|+||||+|+||++++++|+++ |++|++++|+.+.. ... ..++.++.+|++|.+++.++++++
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~---------~~~-~~~~~~~~~D~~d~~~~~~~~~~~- 70 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGK---------EKI-GGEADVFIGDITDADSINPAFQGI- 70 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHH---------HHT-TCCTTEEECCTTSHHHHHHHHTTC-
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCch---------hhc-CCCeeEEEecCCCHHHHHHHHcCC-
Confidence 45789999999999999999999999 89999999953211 111 357889999999999999999966
Q ss_pred ccEEEEcccccCchh-------------hccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRY-------------AMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~-------------~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
|+||||||...... ..++....+++|+.++.++++++++.+.+ +||++||.+++.... +..
T Consensus 71 -d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~SS~~~~~~~~--~~~-- 144 (253)
T 1xq6_A 71 -DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVK-HIVVVGSMGGTNPDH--PLN-- 144 (253)
T ss_dssp -SEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCS-EEEEEEETTTTCTTC--GGG--
T ss_pred -CEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCC-EEEEEcCccCCCCCC--ccc--
Confidence 99999999754211 11122357899999999999999998875 999999988763211 000
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
+ ...+.|+.+|+++|.+++. .|+++++||||.+||+........ .+....++ ....+++
T Consensus 145 --~-~~~~~y~~sK~~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~~~~--------~~~~~~~~------~~~~~~~ 203 (253)
T 1xq6_A 145 --K-LGNGNILVWKRKAEQYLAD----SGTPYTIIRAGGLLDKEGGVRELL--------VGKDDELL------QTDTKTV 203 (253)
T ss_dssp --G-GGGCCHHHHHHHHHHHHHT----SSSCEEEEEECEEECSCSSSSCEE--------EESTTGGG------GSSCCEE
T ss_pred --c-ccchhHHHHHHHHHHHHHh----CCCceEEEecceeecCCcchhhhh--------ccCCcCCc------CCCCcEE
Confidence 0 1124588899999998764 599999999999999864321100 00000111 1134699
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC---cccHHHHHHHHHHHhCc
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT---PVPVSRLVSLLEKILKV 359 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~s~~el~~~i~~~~g~ 359 (424)
+++|+|++++.+++.+.. .+++||+++++ ++|+.|+++.+.+.+|+
T Consensus 204 ~~~Dva~~~~~~~~~~~~------------~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 204 PRADVAEVCIQALLFEEA------------KNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp EHHHHHHHHHHHTTCGGG------------TTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHHcCccc------------cCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 999999999999987542 23799999864 59999999999998875
No 79
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=99.96 E-value=1.5e-29 Score=228.35 Aligned_cols=218 Identities=13% Similarity=0.173 Sum_probs=144.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|+||||+|+||++|+++|+++|++|++++|+.+.... .. .+++++.+|++|.++ +.+.++ |+||
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------~~-~~~~~~~~D~~d~~~--~~~~~~--d~vi 66 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQ---------TH-KDINILQKDIFDLTL--SDLSDQ--NVVV 66 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHH---------HC-SSSEEEECCGGGCCH--HHHTTC--SEEE
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhh---------cc-CCCeEEeccccChhh--hhhcCC--CEEE
Confidence 689999999999999999999999999999996532111 11 578999999999888 777765 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCC-CCCCCCCCCCCCCChHHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKK-VPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~-~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||||.... ...+|+.++.+++++|++.+.+ ++|++||.++|..... .+..|+.+. .|.+.|+.+|.++
T Consensus 67 ~~ag~~~~---------~~~~~~~~~~~l~~a~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~~~~~-~~~~~y~~~k~~~ 135 (221)
T 3ew7_A 67 DAYGISPD---------EAEKHVTSLDHLISVLNGTVSP-RLLVVGGAASLQIDEDGNTLLESKGL-REAPYYPTARAQA 135 (221)
T ss_dssp ECCCSSTT---------TTTSHHHHHHHHHHHHCSCCSS-EEEEECCCC--------------------CCCSCCHHHHH
T ss_pred ECCcCCcc---------ccchHHHHHHHHHHHHHhcCCc-eEEEEecceEEEcCCCCccccccCCC-CCHHHHHHHHHHH
Confidence 99997431 1356999999999999998765 9999999877654332 234444433 5678899999999
Q ss_pred HHHHHHHHH-HhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 239 EAIAHAYNH-IYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 239 e~~~~~~~~-~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
|.+ ..+.. ..++++++|||+.+|||+..... + ...+..+.+. +.+ .++++++|+|++++.+++++
T Consensus 136 e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~~----~---~~~~~~~~~~---~~~---~~~i~~~Dva~~~~~~l~~~ 201 (221)
T 3ew7_A 136 KQL-EHLKSHQAEFSWTYISPSAMFEPGERTGD----Y---QIGKDHLLFG---SDG---NSFISMEDYAIAVLDEIERP 201 (221)
T ss_dssp HHH-HHHHTTTTTSCEEEEECSSCCCCC----------------------------------CCCHHHHHHHHHHHHHSC
T ss_pred HHH-HHHHhhccCccEEEEeCcceecCCCccCc----e---Eeccccceec---CCC---CceEeHHHHHHHHHHHHhCc
Confidence 986 34443 56999999999999998432211 1 1122333332 222 26999999999999999987
Q ss_pred cccCCCCCCCCCCCCcceEEcCCCCcccHHH
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSR 348 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e 348 (424)
. ..+++||++++.+.+..|
T Consensus 202 ~------------~~g~~~~~~~~~~~~~~~ 220 (221)
T 3ew7_A 202 N------------HLNEHFTVAGKLEHHHHH 220 (221)
T ss_dssp S------------CTTSEEECCC--------
T ss_pred c------------ccCCEEEECCCCcccccc
Confidence 5 234899999988777654
No 80
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=99.96 E-value=1e-28 Score=231.28 Aligned_cols=246 Identities=11% Similarity=0.111 Sum_probs=182.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|+|+||||+|+||++++++|+++|++|++++|+.+....... +.....++.++.+|++|.++++++++.+
T Consensus 12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (278)
T 2bgk_A 12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCN----NIGSPDVISFVHCDVTKDEDVRNLVDTTI 87 (278)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----HHCCTTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHH----HhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence 35688999999999999999999999999999999996433222111 1111237899999999999999998754
Q ss_pred ----CccEEEEcccccCch------hhccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR------YAMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~------~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.+. +. ++||++||...|....
T Consensus 88 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~~~----- 161 (278)
T 2bgk_A 88 AKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKK-GSIVFTASISSFTAGE----- 161 (278)
T ss_dssp HHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTC-EEEEEECCGGGTCCCT-----
T ss_pred HHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC-CeEEEEeeccccCCCC-----
Confidence 679999999975421 112334678999999999998887653 43 3999999998876321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCC-cHHHHHHHHHcCCceeEEecCCCCc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDM-AYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
.+...|+.||++.|.+++.++.+ .|+++++||||.|+|+...... ........+....+ .
T Consensus 162 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~----------~ 225 (278)
T 2bgk_A 162 ------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAA----------N 225 (278)
T ss_dssp ------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTC----------S
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhccc----------c
Confidence 24578999999999999999876 4899999999999998653211 01222222222111 1
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHH
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKI 356 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~ 356 (424)
....+++++|+|++++.++...... ..|++|++.+|..+++.|+++.+.+.
T Consensus 226 ~~~~~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gg~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 226 LKGTLLRAEDVADAVAYLAGDESKY----------VSGLNLVIDGGYTRTNPAFPTALKHG 276 (278)
T ss_dssp SCSCCCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred cccccCCHHHHHHHHHHHcCccccc----------CCCCEEEECCcccccCCccchhhhhh
Confidence 1235899999999999998754321 33489999999999999999987654
No 81
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=99.96 E-value=5e-29 Score=233.86 Aligned_cols=245 Identities=17% Similarity=0.091 Sum_probs=178.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|++|||||+||||++++++|+++|++|++++|+.+........ ...++.++.+|++|.++++++++.+
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~~~~~~~~~~~~ 76 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA------YPDRAEAISLDVTDGERIDVVAADVLAR 76 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH------CTTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------ccCCceEEEeeCCCHHHHHHHHHHHHHh
Confidence 4679999999999999999999999999999999976544332211 1357899999999999999998865
Q ss_pred --CccEEEEcccccCch----hhccChHHHHHHHHHH----HHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAG----FVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g----~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||..... ...++.+..+++|+.| +..+++.+++.+.+ +||++||...+..
T Consensus 77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~-~iv~~sS~~~~~~----------- 144 (281)
T 3m1a_A 77 YGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSG-SVVNISSFGGQLS----------- 144 (281)
T ss_dssp HSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTCC-----------
T ss_pred CCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEEcCccccCC-----------
Confidence 789999999985432 2233446789999999 55556666666654 9999999877642
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCC-----CcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPD-----MAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
..+.+.|++||++.|.+++.++.+ .|+++++|+||.|+++..... .....+........... ...
T Consensus 145 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 217 (281)
T 3m1a_A 145 -FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLV------QGS 217 (281)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHH------HC-
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHH------hhc
Confidence 145689999999999999999887 589999999999988753211 00111111111111110 011
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKV 359 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~ 359 (424)
....+.+++|+|++++.+++.+.. +..|+++++....+.+....+.+.++.
T Consensus 218 ~~~~~~~~~dva~a~~~~~~~~~~-------------~~~~~l~s~~~~~i~g~~~~i~~~~~~ 268 (281)
T 3m1a_A 218 DGSQPGDPAKAAAAIRLALDTEKT-------------PLRLALGGDAVDFLTGHLDSVRAELTE 268 (281)
T ss_dssp ----CBCHHHHHHHHHHHHHSSSC-------------CSEEEESHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHhCCCC-------------CeEEecCchHHHHHHHHHHHHHHHHHH
Confidence 223578899999999999987642 268999988877888888888777654
No 82
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=99.96 E-value=1.9e-28 Score=226.37 Aligned_cols=232 Identities=15% Similarity=0.162 Sum_probs=173.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 8 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 84 (255)
T 1fmc_A 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ---LGGQAFACRCDITSEQELSALADFAIS 84 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH---hCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999975433322222111 2357889999999999999988743
Q ss_pred ---CccEEEEcccccCch---hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR---YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~---~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||..... ...++.+..+++|+.++.++++++. +.+.+ +||++||...+...
T Consensus 85 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~~~~~---------- 153 (255)
T 1fmc_A 85 KLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGG-VILTITSMAAENKN---------- 153 (255)
T ss_dssp HHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTCCC----------
T ss_pred hcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEcchhhcCCC----------
Confidence 679999999986532 1233446789999999999888774 34443 99999998887531
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.+...|+.||.+.|.+++.++.++ |++++++|||.++++..... ..+.+...+..+.+. ..+
T Consensus 154 --~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~------------~~~ 218 (255)
T 1fmc_A 154 --INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV-ITPEIEQKMLQHTPI------------RRL 218 (255)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-CCHHHHHHHHHTCSS------------CSC
T ss_pred --CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhc-cChHHHHHHHhcCCc------------ccC
Confidence 456789999999999999998775 89999999999998743211 122333444443322 237
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccH
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPV 346 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~ 346 (424)
++++|+|++++.++...... ..|++|++++|...|+
T Consensus 219 ~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 219 GQPQDIANAALFLCSPAASW----------VSGQILTVSGGGVQEL 254 (255)
T ss_dssp BCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTSCCCC
T ss_pred CCHHHHHHHHHHHhCCcccc----------CCCcEEEECCceeccC
Confidence 89999999999988764321 2348999999887764
No 83
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=99.96 E-value=1.5e-27 Score=222.65 Aligned_cols=226 Identities=15% Similarity=0.063 Sum_probs=173.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|+++||||+|+||++++++|+++|++|++++|+.+......... ..++.++.+|++|.++++++++.+
T Consensus 7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~ 80 (271)
T 3tzq_B 7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV------GRGAVHHVVDLTNEVSVRALIDFTI 80 (271)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH------CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------CCCeEEEECCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999876554433222 457889999999999999998865
Q ss_pred ----CccEEEEcccccCc------hhhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV------RYAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~~~~~~------ 153 (271)
T 3tzq_B 81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGG-AIVNISSATAHAAY------ 153 (271)
T ss_dssp HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCE-EEEEECCGGGTSBC------
T ss_pred HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEECCHHHcCCC------
Confidence 67999999998632 1123334679999999999998887 555544 99999998776431
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.+...|++||++.+.+++.++.+ +|+++++|+||.|++|...... ...+...+....+.
T Consensus 154 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~----------- 215 (271)
T 3tzq_B 154 ------DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLA----------- 215 (271)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTT-----------
T ss_pred ------CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCC-----------
Confidence 44578999999999999999987 5899999999999998654221 12233333332221
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+.+.+|+|++++.++...... ..|+++++.+|.
T Consensus 216 -~r~~~p~dvA~~v~~L~s~~~~~----------itG~~i~vdGG~ 250 (271)
T 3tzq_B 216 -GRIGEPHEIAELVCFLASDRAAF----------ITGQVIAADSGL 250 (271)
T ss_dssp -SSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTT
T ss_pred -CCCcCHHHHHHHHHHHhCcccCC----------cCCCEEEECCCc
Confidence 23678999999999988765432 445899999884
No 84
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=99.96 E-value=1.2e-28 Score=233.58 Aligned_cols=250 Identities=12% Similarity=0.078 Sum_probs=182.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|+|+||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++.+
T Consensus 22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (302)
T 1w6u_A 22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISS--QTGNKVHAIQCDVRDPDMVQNTVSELI 99 (302)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--hcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence 457889999999999999999999999999999999976443332222211 11457899999999999999988876
Q ss_pred ----CccEEEEcccccCc----hhhccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV----RYAMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++.+. ....+||++||...+..
T Consensus 100 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~--------- 170 (302)
T 1w6u_A 100 KVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG--------- 170 (302)
T ss_dssp HHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC---------
T ss_pred HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC---------
Confidence 68999999997543 1223345679999999999988877532 22249999999877642
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcH-HHHHHHHHcCCceeEEecCCCCccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAY-FFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
..+...|+.||++.+.+++.++.+ .|+++++||||.|++++....... ......+....+ .
T Consensus 171 ---~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p------------~ 235 (302)
T 1w6u_A 171 ---SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIP------------C 235 (302)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCT------------T
T ss_pred ---CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCC------------c
Confidence 145578999999999999999877 589999999999998732111000 011122332221 1
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVK 360 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~ 360 (424)
..+++++|+|++++.++...... ..|++|++.+|..+++.++++.+.+..|..
T Consensus 236 ~~~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gg~~~~~~~~~~~~~~~~g~~ 288 (302)
T 1w6u_A 236 GRLGTVEELANLAAFLCSDYASW----------INGAVIKFDGGEEVLISGEFNDLRKVTKEQ 288 (302)
T ss_dssp SSCBCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTHHHHHHSTTGGGGGCCHHH
T ss_pred CCCCCHHHHHHHHHHHcCCcccc----------cCCCEEEECCCeeeccCCccccchhhcccc
Confidence 23788999999999988754321 234899999998899999888887776644
No 85
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.96 E-value=3.6e-28 Score=227.61 Aligned_cols=247 Identities=13% Similarity=0.063 Sum_probs=165.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+.................++.++.+|++|.++++++++.+
T Consensus 3 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 3 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999754433322222110112346889999999999999988854
Q ss_pred ---CccEEEEcccccCchh--------hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcc-cCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY--------AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSV-YGVNKKVP 217 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~--------~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~v-yg~~~~~~ 217 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.+. + ++||++||... +...
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~---- 156 (278)
T 1spx_A 83 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHAT---- 156 (278)
T ss_dssp HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCC----
T ss_pred HcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCC----
Confidence 6799999999754321 23344678999999999988877653 4 49999999876 5421
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCc-HHHH------HHHHHcCCceeE
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMA-YFFF------TRDIIRGKRITV 287 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~-~~~~------~~~~~~~~~~~~ 287 (424)
.+...|+.||++.+.+++.++.+ .|+++++||||.|+++....... .... ...+....+
T Consensus 157 --------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p--- 225 (278)
T 1spx_A 157 --------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVP--- 225 (278)
T ss_dssp --------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCT---
T ss_pred --------CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCC---
Confidence 34578999999999999999876 48999999999999985421100 0000 111111111
Q ss_pred EecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHh
Q 042406 288 YEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKIL 357 (424)
Q Consensus 288 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~ 357 (424)
...+.+++|+|++++.++..+.... ..|++|++.+|..+++.|+++.+.+.+
T Consensus 226 ---------~~~~~~~~dvA~~v~~l~s~~~~~~---------~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 226 ---------AGVMGQPQDIAEVIAFLADRKTSSY---------IIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp ---------TSSCBCHHHHHHHHHHHHCHHHHTT---------CCSCEEEESTTGGGC------------
T ss_pred ---------CcCCCCHHHHHHHHHHHcCccccCc---------ccCcEEEECCCcccccCcccccHHHHh
Confidence 1237899999999999887643210 123899999999999999999988764
No 86
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=99.96 E-value=3e-28 Score=223.61 Aligned_cols=227 Identities=19% Similarity=0.139 Sum_probs=168.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-C
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-A 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~ 154 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+.+..... ..+ ..+++++.+|++|.+++++++++. +
T Consensus 4 ~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (244)
T 1cyd_A 4 NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSL----AKE---CPGIEPVCVDLGDWDATEKALGGIGP 76 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHH---STTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHh---ccCCCcEEecCCCHHHHHHHHHHcCC
Confidence 46789999999999999999999999999999999965332211 111 135778899999999999999865 5
Q ss_pred ccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|+||||||...... ..++.+..+++|+.|+.++++++.+. +..++||++||...|... .
T Consensus 77 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~ 144 (244)
T 1cyd_A 77 VDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF------------P 144 (244)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------T
T ss_pred CCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC------------C
Confidence 799999999754321 22334678999999999988877653 422489999998887531 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 227 PASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
+...|+.||++.|.+++.++.+ .+++++++|||.++++........+.+...+..+.+ .++++++
T Consensus 145 ~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~ 212 (244)
T 1cyd_A 145 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHP------------LRKFAEV 212 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHST------------TSSCBCH
T ss_pred CcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCC------------ccCCCCH
Confidence 4578999999999999999877 489999999999999743211011223333333221 2469999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+|+|++++.++..+... ..|+.+++.+|..
T Consensus 213 ~dva~~~~~l~~~~~~~----------~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 213 EDVVNSILFLLSDRSAS----------TSGGGILVDAGYL 242 (244)
T ss_dssp HHHHHHHHHHHSGGGTT----------CCSSEEEESTTGG
T ss_pred HHHHHHHHHHhCchhhc----------ccCCEEEECCCcc
Confidence 99999999998765422 3348899988753
No 87
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=99.96 E-value=4.4e-29 Score=231.46 Aligned_cols=237 Identities=13% Similarity=0.084 Sum_probs=171.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|++|||||+|+||++++++|+++|++|++++|+.+......... ...+.++.+|++|.++++++++.+
T Consensus 4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 4 KRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI------GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999654333222111 356899999999999999988865
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++... +...+||++||...+...
T Consensus 78 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------- 149 (259)
T 4e6p_A 78 EHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE-------- 149 (259)
T ss_dssp HHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC--------
Confidence 6899999999865322 22344678999999999998877543 222389999998776421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCC---ceeEEecCCCCc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGK---RITVYEAPDGAS 295 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 295 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|++|.... ...+........ ....+ ....
T Consensus 150 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~ 219 (259)
T 4e6p_A 150 ----ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG---VDALFARYENRPRGEKKRLV---GEAV 219 (259)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH---HHHHHHHHHTCCTTHHHHHH---HHHS
T ss_pred ----CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh---hhhhhhhhccCChHHHHHHH---hccC
Confidence 345789999999999999999775 8999999999999984321 001111111110 00000 1122
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
....+.+++|+|++++.++...... ..|++|++.+|..+|
T Consensus 220 p~~r~~~~~dva~~v~~L~s~~~~~----------itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 220 PFGRMGTAEDLTGMAIFLASAESDY----------IVSQTYNVDGGNWMS 259 (259)
T ss_dssp TTSSCBCTHHHHHHHHHTTSGGGTT----------CCSCEEEESTTSSCC
T ss_pred CCCCCcCHHHHHHHHHHHhCCccCC----------CCCCEEEECcChhcC
Confidence 3456899999999999888755432 345899999987553
No 88
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.96 E-value=2.3e-29 Score=226.26 Aligned_cols=206 Identities=9% Similarity=-0.022 Sum_probs=164.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+|+|+||||+|+||++++++|+++|+ +|++++|+.+. ...+++++.+|++|.+++.+++ +
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-------------~~~~~~~~~~D~~~~~~~~~~~----~ 66 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-------------EHPRLDNPVGPLAELLPQLDGS----I 66 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-------------CCTTEECCBSCHHHHGGGCCSC----C
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-------------cCCCceEEeccccCHHHHHHhh----h
Confidence 468999999999999999999999998 99999997543 1247888999999998888777 5
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHH
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK 235 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK 235 (424)
|+||||||.... ...+++..+++|+.++.++++++++.+.+ +||++||.++|+ .+.+.|+.+|
T Consensus 67 d~vi~~a~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~v~~Ss~~~~~--------------~~~~~y~~sK 129 (215)
T 2a35_A 67 DTAFCCLGTTIK--EAGSEEAFRAVDFDLPLAVGKRALEMGAR-HYLVVSALGADA--------------KSSIFYNRVK 129 (215)
T ss_dssp SEEEECCCCCHH--HHSSHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEECCTTCCT--------------TCSSHHHHHH
T ss_pred cEEEECeeeccc--cCCCHHHHHHhhHHHHHHHHHHHHHcCCC-EEEEECCcccCC--------------CCccHHHHHH
Confidence 999999997432 34567889999999999999999998875 999999999986 2457899999
Q ss_pred HHHHHHHHHHHHHhCCc-EEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHh
Q 042406 236 KAGEAIAHAYNHIYGLS-ITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGL 314 (424)
Q Consensus 236 ~~~e~~~~~~~~~~~i~-~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~ 314 (424)
.++|.+++.+ +++ ++++||+.+|||..... +...+. +....+ .. ..++++|++|+|++++.++
T Consensus 130 ~~~e~~~~~~----~~~~~~~vrp~~v~g~~~~~~-----~~~~~~-~~~~~~----~~--~~~~~i~~~Dva~~~~~~~ 193 (215)
T 2a35_A 130 GELEQALQEQ----GWPQLTIARPSLLFGPREEFR-----LAEILA-APIARI----LP--GKYHGIEACDLARALWRLA 193 (215)
T ss_dssp HHHHHHHTTS----CCSEEEEEECCSEESTTSCEE-----GGGGTT-CCCC----------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc----CCCeEEEEeCceeeCCCCcch-----HHHHHH-Hhhhhc----cC--CCcCcEeHHHHHHHHHHHH
Confidence 9999988763 899 99999999999976421 111111 222222 12 2679999999999999999
Q ss_pred hhccccCCCCCCCCCCCCcceEEcCCCCcccHH
Q 042406 315 DTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVS 347 (424)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~ 347 (424)
+++. +++||+++++.+++.
T Consensus 194 ~~~~--------------~~~~~i~~~~~~~~~ 212 (215)
T 2a35_A 194 LEEG--------------KGVRFVESDELRKLG 212 (215)
T ss_dssp TCCC--------------SEEEEEEHHHHHHHH
T ss_pred hcCC--------------CCceEEcHHHHHHhh
Confidence 8754 179999987765543
No 89
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=99.96 E-value=1.6e-27 Score=220.86 Aligned_cols=231 Identities=16% Similarity=0.069 Sum_probs=169.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 10 ~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 86 (260)
T 3awd_A 10 RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM---EGHDVSSVVMDVTNTESVQNAVRSVHE 86 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999975433322222211 1357899999999999999988754
Q ss_pred ---CccEEEEcccccC-ch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAG-VR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~-~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||... .. ...++.+..+++|+.|+.++++++.+ .+.+ +||++||...+...
T Consensus 87 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~~sS~~~~~~~-------- 157 (260)
T 3awd_A 87 QEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQG-VIVAIGSMSGLIVN-------- 157 (260)
T ss_dssp HHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC--------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC-EEEEEecchhcccC--------
Confidence 6799999999754 11 11223367899999999999888754 3443 89999997765421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
+..+...|+.||++.|.+++.++.+ .|+++++||||.|+++........+.+...+..+.+ ..
T Consensus 158 --~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~ 223 (260)
T 3awd_A 158 --RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTP------------MG 223 (260)
T ss_dssp --SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCT------------TS
T ss_pred --CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCC------------cC
Confidence 1123478999999999999999887 589999999999999854311001223333333322 12
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+++++|+|++++.++...... ..|++|++.+|.
T Consensus 224 ~~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gg~ 257 (260)
T 3awd_A 224 RVGQPDEVASVVQFLASDAASL----------MTGAIVNVDAGF 257 (260)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTT
T ss_pred CCCCHHHHHHHHHHHhCchhcc----------CCCcEEEECCce
Confidence 4889999999999988764322 334899999875
No 90
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=99.96 E-value=2.2e-27 Score=222.31 Aligned_cols=247 Identities=14% Similarity=0.110 Sum_probs=173.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch--------hhhHHHHHhh-hhccCCeEEEEccCCCHH
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--------ETSLKKARKG-LLERAGVFVIDADINDKS 144 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~ 144 (424)
..++++|++|||||+|+||++++++|+++|++|++++|+.... .+........ .....++.++.+|++|.+
T Consensus 8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 87 (278)
T 3sx2_A 8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE 87 (278)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence 3457899999999999999999999999999999999973210 1111111111 112468999999999999
Q ss_pred HHHHHhhcc-----CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCC
Q 042406 145 LLDKIFNVV-----AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKK 215 (424)
Q Consensus 145 ~v~~~~~~~-----~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~ 215 (424)
+++++++.+ ++|+||||||+.......++.+..+++|+.|+.++++++.. .+...+||++||...+.....
T Consensus 88 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~ 167 (278)
T 3sx2_A 88 SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS 167 (278)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc
Confidence 999998865 68999999998765444455678999999999998887643 332348999999776542110
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCC
Q 042406 216 VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 216 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
+..+...|++||++.+.+++.++.++ |+++++|+||.|.+|..........+............+ .
T Consensus 168 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~---~ 236 (278)
T 3sx2_A 168 --------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAM---G 236 (278)
T ss_dssp --------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTT---S
T ss_pred --------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhh---h
Confidence 11234679999999999999998775 799999999999998654321111111112222111111 1
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.... ..+++++|+|++++.++...... ..|+++++.+|.
T Consensus 237 ~~~p-~~~~~p~dvA~~v~~l~s~~~~~----------itG~~i~vdGG~ 275 (278)
T 3sx2_A 237 NAMP-VEVLAPEDVANAVAWLVSDQARY----------ITGVTLPVDAGF 275 (278)
T ss_dssp CSSS-CSSBCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTT
T ss_pred hhcC-cCcCCHHHHHHHHHHHhCccccc----------ccCCEEeECCCc
Confidence 2222 56899999999999988765432 445899998875
No 91
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=99.96 E-value=1.5e-27 Score=223.77 Aligned_cols=247 Identities=15% Similarity=0.148 Sum_probs=172.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch--------hhhHHHHHhh-hhccCCeEEEEccCCCHH
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--------ETSLKKARKG-LLERAGVFVIDADINDKS 144 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~ 144 (424)
+.++++|++|||||+|+||++++++|+++|++|++++|+.+.. .......... .....++.++.+|++|.+
T Consensus 5 m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 84 (281)
T 3s55_A 5 MADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRA 84 (281)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence 4467899999999999999999999999999999999974321 1111111111 112457899999999999
Q ss_pred HHHHHhhcc-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccC
Q 042406 145 LLDKIFNVV-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 145 ~v~~~~~~~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg 211 (424)
+++++++.+ ++|+||||||+..... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+.
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~ 163 (281)
T 3s55_A 85 ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYG-RIVTVSSMLGHS 163 (281)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGGS
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEECChhhcC
Confidence 999998865 6899999999865322 23334678999999999998875 344443 899999987764
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCc---e
Q 042406 212 VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKR---I 285 (424)
Q Consensus 212 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~---~ 285 (424)
.. .+...|++||++.+.+++.++.++ |+++++|+||.|++|..........+......... .
T Consensus 164 ~~------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (281)
T 3s55_A 164 AN------------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVE 231 (281)
T ss_dssp CC------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHH
T ss_pred CC------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHH
Confidence 21 445789999999999999999874 89999999999999865421100000000000000 0
Q ss_pred eEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 286 TVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 286 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
..+. ........+.+++|+|++++.++...... ..|+++++.+|...+
T Consensus 232 ~~~~--~~~~~~~~~~~p~dvA~~v~~L~s~~~~~----------itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 232 SVFA--SLHLQYAPFLKPEEVTRAVLFLVDEASSH----------ITGTVLPIDAGATAR 279 (281)
T ss_dssp HHHH--HHCSSSCSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGG
T ss_pred HHHH--hhhccCcCCCCHHHHHHHHHHHcCCcccC----------CCCCEEEECCCcccC
Confidence 0000 00111246899999999999998765432 345899999987654
No 92
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.95 E-value=4e-27 Score=218.56 Aligned_cols=233 Identities=13% Similarity=0.059 Sum_probs=173.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+.++++|+++||||+|+||++++++|+++|++|++++|+.+..+........ ....++.++.+|++|.++++++++.+
T Consensus 5 m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 5 MFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQ--LGSGKVIGVQTDVSDRAQCDALAGRA 82 (262)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT--TSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--hCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999976554443332221 12357899999999999999988765
Q ss_pred -----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.+. +.+ +||++||......
T Consensus 83 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g-~iv~isS~~~~~~-------- 153 (262)
T 3pk0_A 83 VEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSG-RVVLTSSITGPIT-------- 153 (262)
T ss_dssp HHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSC-EEEEECCSBTTTB--------
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEechhhccC--------
Confidence 6899999999864322 22334568999999999888877554 544 9999999765311
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
...+...|++||.+.+.+++.++.+ .|+++++|+||.|+++..... ...+...+....+.
T Consensus 154 ---~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~------------ 216 (262)
T 3pk0_A 154 ---GYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPA------------ 216 (262)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTT------------
T ss_pred ---CCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCC------------
Confidence 1145678999999999999999987 489999999999998743211 12233334333221
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
..+.+.+|+|++++.++...... ..|+++++.+|..+
T Consensus 217 ~r~~~p~dva~~v~~L~s~~~~~----------itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 217 GALGTPEDIGHLAAFLATKEAGY----------ITGQAIAVDGGQVL 253 (262)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTTTC
T ss_pred CCCcCHHHHHHHHHHHhCccccC----------CcCCEEEECCCeec
Confidence 12778999999999988765432 44589999988654
No 93
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=99.95 E-value=1.5e-27 Score=220.72 Aligned_cols=233 Identities=14% Similarity=0.103 Sum_probs=173.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|+++||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++.+|++|.++++++++.+
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ---AGGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999976544433332221 2467899999999999999988865
Q ss_pred ----CccEEEEcccccCchh---hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY---AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~---~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+. .+||++||...+..
T Consensus 85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~---------- 153 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGG-GAILNISSMAGENT---------- 153 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-EEEEEECCGGGTCC----------
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-cEEEEEcCHHHcCC----------
Confidence 6899999999865422 233446789999999999988864 3443 39999999877642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++..... ........+....+ ...
T Consensus 154 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~p------------~~r 218 (256)
T 3gaf_A 154 --NVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATV-LTPEIERAMLKHTP------------LGR 218 (256)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHH-CCHHHHHHHHTTCT------------TSS
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhc-cCHHHHHHHHhcCC------------CCC
Confidence 1446889999999999999998875 89999999999988632100 00122222332221 234
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccH
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPV 346 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~ 346 (424)
+.+++|+|++++.++...... ..|+++++.+|...++
T Consensus 219 ~~~~~dva~~~~~L~s~~~~~----------itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 219 LGEAQDIANAALFLCSPAAAW----------ISGQVLTVSGGGVQEL 255 (256)
T ss_dssp CBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTSCCC-
T ss_pred CCCHHHHHHHHHHHcCCcccC----------ccCCEEEECCCccccC
Confidence 788999999999988765432 3458999999876654
No 94
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=99.95 E-value=3.3e-27 Score=222.50 Aligned_cols=234 Identities=14% Similarity=0.037 Sum_probs=175.0
Q ss_pred CCCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 73 RPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 73 ~~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
.+.++++|++|||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++.
T Consensus 35 ~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dv~d~~~v~~~~~~ 112 (293)
T 3rih_A 35 VMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGE--LGAGNVIGVRLDVSDPGSCADAART 112 (293)
T ss_dssp CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTT--SSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--hCCCcEEEEEEeCCCHHHHHHHHHH
Confidence 34567899999999999999999999999999999999987655444333322 1225789999999999999998876
Q ss_pred c-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
+ ++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+..
T Consensus 113 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iV~isS~~~~~~------- 184 (293)
T 3rih_A 113 VVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRG-RVILTSSITGPVT------- 184 (293)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSC-EEEEECCSBTTTB-------
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEEeChhhccC-------
Confidence 6 7899999999865322 23344679999999999998887 345544 9999999765311
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
...+...|++||++.+.+++.++.++ |+++++|+||.|+++..... ...+...+....++.
T Consensus 185 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~---------- 248 (293)
T 3rih_A 185 ----GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMG---------- 248 (293)
T ss_dssp ----BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--CHHHHHHHHTTSTTS----------
T ss_pred ----CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--cHHHHHHHHhcCCCC----------
Confidence 11345789999999999999998774 89999999999998743211 122333444433321
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
-+...+|+|++++.++...... ..|+++++.+|..+
T Consensus 249 --r~~~p~dvA~~v~fL~s~~a~~----------itG~~i~vdGG~~~ 284 (293)
T 3rih_A 249 --MLGSPVDIGHLAAFLATDEAGY----------ITGQAIVVDGGQVL 284 (293)
T ss_dssp --SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTTTC
T ss_pred --CCCCHHHHHHHHHHHhCccccC----------CCCCEEEECCCccC
Confidence 2567899999999988765432 44589999988654
No 95
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=99.95 E-value=7.2e-28 Score=233.11 Aligned_cols=238 Identities=16% Similarity=0.163 Sum_probs=176.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEcc-CCCHHHHHHHhhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD-INDKSLLDKIFNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D-l~d~~~v~~~~~~~~~d 156 (424)
.+|+|+||||||+||++|+++|+++|++|++++|+.+.... ... ....+++++.+| ++|.+++.++++++ |
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l----~~~~~v~~v~~D~l~d~~~l~~~~~~~--d 75 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EEL----QAIPNVTLFQGPLLNNVPLMDTLFEGA--H 75 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHH----HTSTTEEEEESCCTTCHHHHHHHHTTC--S
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHH----hhcCCcEEEECCccCCHHHHHHHHhcC--C
Confidence 46789999999999999999999999999999997654311 111 112478999999 99999999999976 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCc--ccCCCCCCCCCCCCCCCCCCChHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSS--VYGVNKKVPFSEKDRTDQPASLYAA 233 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~--vyg~~~~~~~~e~~~~~~~~~~Y~~ 233 (424)
+||||++... . ..|..+ .+++++|++.+ ++ +||++||.+ .|+. .+...|+.
T Consensus 76 ~Vi~~a~~~~-----~------~~~~~~-~~l~~aa~~~g~v~-~~V~~SS~~~~~~~~-------------~~~~~y~~ 129 (352)
T 1xgk_A 76 LAFINTTSQA-----G------DEIAIG-KDLADAAKRAGTIQ-HYIYSSMPDHSLYGP-------------WPAVPMWA 129 (352)
T ss_dssp EEEECCCSTT-----S------CHHHHH-HHHHHHHHHHSCCS-EEEEEECCCGGGTSS-------------CCCCTTTH
T ss_pred EEEEcCCCCC-----c------HHHHHH-HHHHHHHHHcCCcc-EEEEeCCccccccCC-------------CCCccHHH
Confidence 9999987531 1 247777 99999999988 75 999999975 4432 23367999
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH-HHHHHHHHH
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI-DDIVKGCLA 312 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v-~Dva~a~~~ 312 (424)
+|+++|.++++. ++++++|||+ +||++..... ...+.......+... +..++.++..++++|+ +|+|++++.
T Consensus 130 sK~~~E~~~~~~----gi~~~ivrpg-~~g~~~~~~~-~~~~~~~~~~~g~~~-~~~~~~~~~~~~~i~v~~Dva~ai~~ 202 (352)
T 1xgk_A 130 PKFTVENYVRQL----GLPSTFVYAG-IYNNNFTSLP-YPLFQMELMPDGTFE-WHAPFDPDIPLPWLDAEHDVGPALLQ 202 (352)
T ss_dssp HHHHHHHHHHTS----SSCEEEEEEC-EEGGGCBSSS-CSSCBEEECTTSCEE-EEESSCTTSCEEEECHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc----CCCEEEEecc-eecCCchhcc-cccccccccCCCceE-EeeccCCCCceeeEecHHHHHHHHHH
Confidence 999999998764 8999999987 6887653211 000000001122221 1222557888999999 899999999
Q ss_pred HhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCccccccccc
Q 042406 313 GLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLP 367 (424)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~ 367 (424)
+++++... ..+++||+++ +.+|+.|+++.+.+.+|.+.+....|
T Consensus 203 ~l~~~~~~----------~~g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~~~~vp 246 (352)
T 1xgk_A 203 IFKDGPQK----------WNGHRIALTF-ETLSPVQVCAAFSRALNRRVTYVQVP 246 (352)
T ss_dssp HHHHCHHH----------HTTCEEEECS-EEECHHHHHHHHHHHHTSCEEEEECS
T ss_pred HHhCCchh----------hCCeEEEEec-CCCCHHHHHHHHHHHHCCCCceEECC
Confidence 99875211 1238999996 67999999999999999987665554
No 96
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=99.95 E-value=1.3e-27 Score=222.02 Aligned_cols=234 Identities=11% Similarity=0.063 Sum_probs=168.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (263)
T 3ai3_A 4 GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKE--KFGVRVLEVAVDVATPEGVDAVVESVRS 81 (263)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH--hcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999975443322222111 11357899999999999999988754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+.+ +||++||...+...
T Consensus 82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~--------- 151 (263)
T 3ai3_A 82 SFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGG-AIIHNASICAVQPL--------- 151 (263)
T ss_dssp HHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECchhhcCCC---------
Confidence 6799999999854321 223346789999999988887764 34443 99999998887531
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCC---------cHHHHHHHHHcCCceeEEec
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDM---------AYFFFTRDIIRGKRITVYEA 290 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 290 (424)
.+...|++||++.+.+++.++.+ .|+++++||||.|++|...... ....+...+....
T Consensus 152 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 221 (263)
T 3ai3_A 152 ---WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH------- 221 (263)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH-------
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC-------
Confidence 34578999999999999999877 4899999999999997321000 0001111111110
Q ss_pred CCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 291 PDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 291 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
.....+.+++|+|++++.++..+... ..|++|++.+|..++
T Consensus 222 ----~p~~~~~~~~dvA~~~~~l~s~~~~~----------~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 222 ----APIKRFASPEELANFFVFLCSERATY----------SVGSAYFVDGGMLKT 262 (263)
T ss_dssp ----CTTCSCBCHHHHHHHHHHHTSTTCTT----------CCSCEEEESTTCCCC
T ss_pred ----CCCCCCcCHHHHHHHHHHHcCccccC----------CCCcEEEECCCcccc
Confidence 01234889999999999988754321 334899999887654
No 97
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=99.95 E-value=4.1e-27 Score=218.17 Aligned_cols=218 Identities=15% Similarity=0.148 Sum_probs=167.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+.++|++|||||+|+||++++++|+++|++|++++|+.+.. ....+.++.+|++|+++++++++.+
T Consensus 25 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 92 (260)
T 3un1_A 25 RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPS------------ADPDIHTVAGDISKPETADRIVREGIE 92 (260)
T ss_dssp HTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCC------------SSTTEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhc------------ccCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999965432 1237899999999999999998865
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||+..... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+....
T Consensus 93 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~~~~~~~-------- 163 (260)
T 3un1_A 93 RFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSG-HIVSITTSLVDQPMV-------- 163 (260)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCTTTTSCBT--------
T ss_pred HCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCc-EEEEEechhhccCCC--------
Confidence 6899999999865322 22334678999999999998877 445544 899999987764321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|+.||++.+.+++.++.++ |+++++|+||.|++|..... ....+.... ....
T Consensus 164 --~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-----~~~~~~~~~------------p~~r 224 (260)
T 3un1_A 164 --GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE-----THSTLAGLH------------PVGR 224 (260)
T ss_dssp --TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG-----GHHHHHTTS------------TTSS
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH-----HHHHHhccC------------CCCC
Confidence 1456789999999999999999887 89999999999999865421 122222222 2234
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
+.+++|+|++++.+.+. .. ..|++|++.+|...+
T Consensus 225 ~~~~~dva~av~~L~~~-~~-----------itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 225 MGEIRDVVDAVLYLEHA-GF-----------ITGEILHVDGGQNAG 258 (260)
T ss_dssp CBCHHHHHHHHHHHHHC-TT-----------CCSCEEEESTTGGGC
T ss_pred CcCHHHHHHHHHHhccc-CC-----------CCCcEEEECCCeecc
Confidence 78899999999988322 21 345899999886543
No 98
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=99.95 E-value=4.3e-27 Score=216.32 Aligned_cols=226 Identities=15% Similarity=0.129 Sum_probs=170.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc-hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+.+|+++||||+|+||++++++|+++|++|++++|.... .+....... ....++.++.+|++|.++++++++.+
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 78 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIK---AKGVDSFAIQANVADADEVKAMIKEVVS 78 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH---hcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999885532 222111111 12457889999999999999998865
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~--------- 148 (246)
T 3osu_A 79 QFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSG-AIINLSSVVGAVGN--------- 148 (246)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHHHHHCC---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEEcchhhcCCC---------
Confidence 7899999999864322 23334679999999999998887 444544 89999997665321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|+.||++.+.+++.++.++ |+++++|+||.|+++.... ....+...+..+.+. ..
T Consensus 149 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~------------~r 211 (246)
T 3osu_A 149 ---PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDA--LSDELKEQMLTQIPL------------AR 211 (246)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSC--SCHHHHHHHHTTCTT------------CS
T ss_pred ---CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccc--cCHHHHHHHHhcCCC------------CC
Confidence 346789999999999999998754 8999999999999986432 223444445444332 23
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+.+.+|+|++++.++...... ..|++|++.+|.
T Consensus 212 ~~~~~dva~~v~~l~s~~~~~----------itG~~i~vdgG~ 244 (246)
T 3osu_A 212 FGQDTDIANTVAFLASDKAKY----------ITGQTIHVNGGM 244 (246)
T ss_dssp CBCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTS
T ss_pred CcCHHHHHHHHHHHhCccccC----------CCCCEEEeCCCc
Confidence 778899999999988765432 345899999874
No 99
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=99.95 E-value=2.7e-27 Score=217.30 Aligned_cols=227 Identities=16% Similarity=0.143 Sum_probs=166.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-C
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-A 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~ 154 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+.+..+.. ..+ ..++.++.+|++|.++++++++.. +
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 76 (244)
T 3d3w_A 4 FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSL----VRE---CPGIEPVCVDLGDWEATERALGSVGP 76 (244)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHH---STTCEEEECCTTCHHHHHHHHTTCCC
T ss_pred ccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHH---cCCCCEEEEeCCCHHHHHHHHHHcCC
Confidence 46789999999999999999999999999999999964322211 111 135678899999999999999864 5
Q ss_pred ccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|+||||||...... ..++.+..+++|+.++.++++++.+. +..++||++||...+... .
T Consensus 77 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------~ 144 (244)
T 3d3w_A 77 VDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV------------T 144 (244)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------T
T ss_pred CCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC------------C
Confidence 799999999754321 22334679999999998888877553 412489999998776521 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
+...|+.||++.|.+++.++.++ |+++++||||.|+++..............+.... ....++++
T Consensus 145 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 212 (244)
T 3d3w_A 145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRI------------PLGKFAEV 212 (244)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTC------------TTCSCBCH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhC------------CCCCCcCH
Confidence 45789999999999999998773 8999999999999974321000001122222221 12358999
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+|+|++++.++...... ..|++|++.+|..
T Consensus 213 ~dva~~~~~l~~~~~~~----------~~G~~~~v~gG~~ 242 (244)
T 3d3w_A 213 EHVVNAILFLLSDRSGM----------TTGSTLPVEGGFW 242 (244)
T ss_dssp HHHHHHHHHHHSGGGTT----------CCSCEEEESTTGG
T ss_pred HHHHHHHHHHcCccccC----------CCCCEEEECCCcc
Confidence 99999999998764321 2348999998754
No 100
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=99.95 E-value=5.1e-27 Score=218.29 Aligned_cols=230 Identities=15% Similarity=0.080 Sum_probs=154.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc--
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV-- 152 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~-- 152 (424)
.++++|+|+||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.
T Consensus 10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (266)
T 1xq1_A 10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK---KGFQVTGSVCDASLRPEREKLMQTVS 86 (266)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeeEEEECCCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999975443332222211 134689999999999999988864
Q ss_pred ----cCccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 153 ----VAFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 153 ----~~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
.++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 87 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~-~iv~isS~~~~~~~------- 158 (266)
T 1xq1_A 87 SMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCG-NIIFMSSIAGVVSA------- 158 (266)
T ss_dssp HHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSC-EEEEEC---------------
T ss_pred HHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEccchhccCC-------
Confidence 36799999999754321 22334678999999999998887 445544 99999998776421
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.+...|+.||++.+.+++.++.++ |+++++||||.++++...... ...+...+... ...
T Consensus 159 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~------------~~~ 220 (266)
T 1xq1_A 159 -----SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISR------------KPL 220 (266)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------------
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhc------------CCC
Confidence 345789999999999999998775 899999999999998543210 00111111111 111
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
..+++++|+|++++.++...... ..|++|++.+|..
T Consensus 221 ~~~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gG~~ 256 (266)
T 1xq1_A 221 GRFGEPEEVSSLVAFLCMPAASY----------ITGQTICVDGGLT 256 (266)
T ss_dssp ---CCGGGGHHHHHHHTSGGGTT----------CCSCEEECCCCEE
T ss_pred CCCcCHHHHHHHHHHHcCccccC----------ccCcEEEEcCCcc
Confidence 24788999999999988754322 3348999998754
No 101
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=99.95 E-value=8.1e-28 Score=228.89 Aligned_cols=240 Identities=14% Similarity=0.190 Sum_probs=175.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+|+||||||+||++++++|+++|++|++++|+.+...+..... ...+...+++++.+|++|++++.++++++ |+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~d~~~l~~~~~~~--d~v 80 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFKQLGAKLIEASLDDHQRLVDALKQV--DVV 80 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHHTTTCEEECCCSSCHHHHHHHHTTC--SEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHHhCCeEEEeCCCCCHHHHHHHHhCC--CEE
Confidence 578999999999999999999999999999999764321111111 11123467999999999999999999976 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCC-CChHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQP-ASLYAATKK 236 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~-~~~Y~~sK~ 236 (424)
||+|+..... .|+.++.+++++|++.+ ++ +||+ | +||...... +.+. .| ...| .+|.
T Consensus 81 i~~a~~~~~~-----------~~~~~~~~l~~aa~~~g~v~-~~v~-S---~~g~~~~~~---~~~~-~p~~~~y-~sK~ 139 (313)
T 1qyd_A 81 ISALAGGVLS-----------HHILEQLKLVEAIKEAGNIK-RFLP-S---EFGMDPDIM---EHAL-QPGSITF-IDKR 139 (313)
T ss_dssp EECCCCSSSS-----------TTTTTHHHHHHHHHHSCCCS-EEEC-S---CCSSCTTSC---CCCC-SSTTHHH-HHHH
T ss_pred EECCccccch-----------hhHHHHHHHHHHHHhcCCCc-eEEe-c---CCcCCcccc---ccCC-CCCcchH-HHHH
Confidence 9999975321 26778899999999998 75 8885 3 455322211 1112 23 4578 9999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHH----HHcCCceeEEecCCCCccccccccHHHHHHHHHH
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRD----IIRGKRITVYEAPDGASVARDFTYIDDIVKGCLA 312 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 312 (424)
++|.++++ .|++++++||+.++|+.... +... ...++.+.++ ++++..++++|++|+|++++.
T Consensus 140 ~~e~~~~~----~g~~~~ilrp~~~~~~~~~~------~~~~~~~~~~~~~~~~~~---~~g~~~~~~i~~~Dva~~~~~ 206 (313)
T 1qyd_A 140 KVRRAIEA----ASIPYTYVSSNMFAGYFAGS------LAQLDGHMMPPRDKVLIY---GDGNVKGIWVDEDDVGTYTIK 206 (313)
T ss_dssp HHHHHHHH----TTCCBCEEECCEEHHHHTTT------SSCTTCCSSCCSSEECCB---TTSCSEEEEECHHHHHHHHHH
T ss_pred HHHHHHHh----cCCCeEEEEeceeccccccc------cccccccccCCCCeEEEe---CCCCceEEEEEHHHHHHHHHH
Confidence 99988764 48999999999998753211 0000 1123333333 567889999999999999999
Q ss_pred HhhhccccCCCCCCCCCCCCcceEEcCC-CCcccHHHHHHHHHHHhCccccccccc
Q 042406 313 GLDTAKKSTGSGGKKKGPAEFRIFNLGN-TTPVPVSRLVSLLEKILKVKAETKVLP 367 (424)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 367 (424)
++..+.. .+++|++.+ ++.+|+.|+++.+.+.+|.+.+....|
T Consensus 207 ~l~~~~~------------~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 250 (313)
T 1qyd_A 207 SIDDPQT------------LNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYIS 250 (313)
T ss_dssp HTTCGGG------------SSSEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBC
T ss_pred HHhCccc------------CCceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECC
Confidence 9987642 126788876 478999999999999999887655443
No 102
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=99.95 E-value=5.5e-27 Score=217.06 Aligned_cols=233 Identities=11% Similarity=0.087 Sum_probs=169.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|++|||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++.+|++|.++++++++.+
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 79 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ---FPGQILTVQMDVRNTDDIQKMIEQIDE 79 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---STTCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999976544333222211 2357899999999999999998865
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+...+||++||...+...
T Consensus 80 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 150 (257)
T 3imf_A 80 KFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG--------- 150 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC---------
Confidence 7899999999754321 223346799999999999888773 22223499999998776421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH----hCCcEEEEEeccccCCCCCCCCcH-HHHHHHHHcCCceeEEecCCCCccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI----YGLSITGLRFFTVYGPWGRPDMAY-FFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~i~~~~vrp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.....|++||++.+.+++.++.+ .|+++++|+||.|.++........ ..+...+.... ..
T Consensus 151 ---~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~------------p~ 215 (257)
T 3imf_A 151 ---PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSV------------PL 215 (257)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTS------------TT
T ss_pred ---CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcC------------CC
Confidence 34578999999999999988754 389999999999998854321100 00111122211 12
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
..+.+++|+|++++.++...... ..|+++++.+|..++
T Consensus 216 ~r~~~pedvA~~v~~L~s~~~~~----------itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 216 GRLGTPEEIAGLAYYLCSDEAAY----------INGTCMTMDGGQHLH 253 (257)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTTTSC
T ss_pred CCCcCHHHHHHHHHHHcCchhcC----------ccCCEEEECCCcccC
Confidence 23788999999999988765432 345899999887554
No 103
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=99.95 E-value=4.6e-28 Score=223.55 Aligned_cols=229 Identities=15% Similarity=0.096 Sum_probs=165.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--Ccc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--AFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--~~d 156 (424)
+|+||||||+||||++++++|+++|++|++++|+.+.... .+.+|++|.++++++++.. ++|
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----------------~~~~D~~~~~~~~~~~~~~~~~~d 64 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA----------------DLSTPGGRETAVAAVLDRCGGVLD 64 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------------CTTSHHHHHHHHHHHHHHHTTCCS
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc----------------cccCCcccHHHHHHHHHHcCCCcc
Confidence 3689999999999999999999999999999996543211 1568999999999999854 679
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCC-CC-------CCCC-
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVP-FS-------EKDR- 223 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~-~~-------e~~~- 223 (424)
+||||||.... ..+.+..+++|+.|+.++++++.+. +. ++||++||.++|+.....+ .. ++.+
T Consensus 65 ~vi~~Ag~~~~---~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~-~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (255)
T 2dkn_A 65 GLVCCAGVGVT---AANSGLVVAVNYFGVSALLDGLAEALSRGQQ-PAAVIVGSIAATQPGAAELPMVEAMLAGDEARAI 140 (255)
T ss_dssp EEEECCCCCTT---SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSS-CEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHH
T ss_pred EEEECCCCCCc---chhHHHHHHHHhHHHHHHHHHHHHHhhhcCC-ceEEEEeccccccccccccchhhhhcccchhhhh
Confidence 99999997542 3557889999999999999987654 33 4999999999987431110 00 0000
Q ss_pred -----CCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 224 -----TDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 224 -----~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
...+...|+.||++.|.+++.++++ .|++++++|||.|+|+... .++.....+.....+ .+
T Consensus 141 ~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~------~~~~~~~~~~~~~~~----~~- 209 (255)
T 2dkn_A 141 ELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ------ASKADPRYGESTRRF----VA- 209 (255)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH------HHHHCTTTHHHHHSC----CC-
T ss_pred hhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh------hcccchhhHHHHHHH----HH-
Confidence 0034578999999999999998876 5999999999999997321 110000000000000 01
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHH
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSR 348 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e 348 (424)
...++++++|+|++++.++..+... ..|++|++++|..+++.|
T Consensus 210 ~~~~~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 210 PLGRGSEPREVAEAIAFLLGPQASF----------IHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTHHHHHCT
T ss_pred HhcCCCCHHHHHHHHHHHhCCCccc----------ceeeEEEecCCeEeeeec
Confidence 3457999999999999999865321 234899999988776654
No 104
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=99.95 E-value=5.1e-27 Score=217.33 Aligned_cols=230 Identities=13% Similarity=0.054 Sum_probs=169.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-eCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.++|++|||||+|+||++++++|+++|++|+++ +|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK---LGVKVLVVKANVGQPAKIKEMFQQIDE 78 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999997 6754433332222211 2357899999999999999998876
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+. .+||++||.+.+..
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~-g~iv~isS~~~~~~---------- 147 (258)
T 3oid_A 79 TFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGG-GHIVSISSLGSIRY---------- 147 (258)
T ss_dssp HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC-EEEEEEEEGGGTSB----------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-cEEEEECchhhCCC----------
Confidence 7899999999754322 222345689999999999888774 3443 39999999877642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++..........+...+....+ ...
T Consensus 148 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------------~~r 213 (258)
T 3oid_A 148 --LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTP------------AGR 213 (258)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCT------------TSS
T ss_pred --CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCC------------CCC
Confidence 1456889999999999999999875 89999999999998744321111223333333222 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
+.+++|+|++++.++...... ..|+++++.+|...
T Consensus 214 ~~~~~dva~~v~~L~s~~~~~----------itG~~i~vdGG~~~ 248 (258)
T 3oid_A 214 MVEIKDMVDTVEFLVSSKADM----------IRGQTIIVDGGRSL 248 (258)
T ss_dssp CBCHHHHHHHHHHHTSSTTTT----------CCSCEEEESTTGGG
T ss_pred CcCHHHHHHHHHHHhCcccCC----------ccCCEEEECCCccC
Confidence 788999999999988765432 44589999988644
No 105
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=99.95 E-value=2.6e-27 Score=218.64 Aligned_cols=229 Identities=17% Similarity=0.164 Sum_probs=143.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|+.+........... ....+.++.+|++|.++++++++.+
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA---DGGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999976544433332221 2457899999999999999998865
Q ss_pred ----CccEEEEcccccCch-------hhccChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR-------YAMQNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~-------~~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
++|+||||||..... ...++.+..+++|+.|+.+++++ +++.+.+ +||++||...|.
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~------- 153 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGG-AIVNQSSTAAWL------- 153 (253)
T ss_dssp HHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEEECC------------
T ss_pred HHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCC-EEEEECCccccC-------
Confidence 789999999984321 12233467999999996665554 4455544 899999988762
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
+...|++||++.+.+++.++.++ |+++++|+||.|+++..... ....+...+..+.+
T Consensus 154 --------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~----------- 213 (253)
T 3qiv_A 154 --------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTT-TPKEMVDDIVKGLP----------- 213 (253)
T ss_dssp --------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------------
T ss_pred --------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhc-CcHHHHHHHhccCC-----------
Confidence 23569999999999999999886 79999999999999854321 11112222222222
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
...+.+++|+|++++.++...... ..|++|++.+|..++
T Consensus 214 -~~~~~~~~dva~~~~~l~s~~~~~----------~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 214 -LSRMGTPDDLVGMCLFLLSDEASW----------ITGQIFNVDGGQIIR 252 (253)
T ss_dssp -------CCHHHHHHHHHHSGGGTT----------CCSCEEEC-------
T ss_pred -CCCCCCHHHHHHHHHHHcCccccC----------CCCCEEEECCCeecC
Confidence 223566899999999988765432 345899999887543
No 106
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=99.95 E-value=8.1e-27 Score=218.69 Aligned_cols=242 Identities=14% Similarity=0.077 Sum_probs=166.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+.++.+|++|||||+|+||++++++|+++|++|++++|+............ .......+.++.+|++|.++++++++.+
T Consensus 20 ~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 98 (281)
T 3v2h_A 20 FQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEV-AGLSSGTVLHHPADMTKPSEIADMMAMV 98 (281)
T ss_dssp --CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHH-HTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHH-hhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 346788999999999999999999999999999999995432211111111 1112457899999999999999988865
Q ss_pred -----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 99 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~~------- 170 (281)
T 3v2h_A 99 ADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWG-RIINIASAHGLVAS------- 170 (281)
T ss_dssp HHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC-------
T ss_pred HHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEECCcccccCC-------
Confidence 6899999999865432 22334678999999999988876 444443 89999998776421
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCce-eEEecCCCCcc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRI-TVYEAPDGASV 296 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 296 (424)
.....|++||++.+.+++.++.++ |+++++|+||.|.+|..................... ..+ .....
T Consensus 171 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p 242 (281)
T 3v2h_A 171 -----PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVM---LKGQP 242 (281)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------------------------------CCT
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHH---HhcCC
Confidence 345789999999999999998775 899999999999998543210000000000000000 011 23344
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+++++|+|++++.++...... ..|+++++.+|.
T Consensus 243 ~~r~~~~edvA~~v~~L~s~~a~~----------itG~~i~vdGG~ 278 (281)
T 3v2h_A 243 TKKFITVEQVASLALYLAGDDAAQ----------ITGTHVSMDGGW 278 (281)
T ss_dssp TCSCBCHHHHHHHHHHHHSSGGGG----------CCSCEEEESTTG
T ss_pred CCCccCHHHHHHHHHHHcCCCcCC----------CCCcEEEECCCc
Confidence 567999999999999988765432 345899998874
No 107
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=99.95 E-value=4.9e-27 Score=217.88 Aligned_cols=235 Identities=16% Similarity=0.080 Sum_probs=170.8
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
++++|+++||||+ |+||++++++|+++|++|++++|+.+ ........... ...+.++.+|++|.++++++++.+
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~ 80 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEA---LGGALLFRADVTQDEELDALFAGV 80 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHH---TTCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHHHH
Confidence 4678999999999 99999999999999999999999753 22222222111 124789999999999999988865
Q ss_pred -----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++.+... ..+||++||.+.+...
T Consensus 81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------ 154 (261)
T 2wyu_A 81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV------ 154 (261)
T ss_dssp HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC------
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC------
Confidence 67999999998643 112334467999999999999999876521 1389999997765421
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|+++..........+...+....+.
T Consensus 155 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~----------- 217 (261)
T 2wyu_A 155 ------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL----------- 217 (261)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT-----------
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC-----------
Confidence 345689999999999999998775 899999999999998543211122233333322221
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHH
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSR 348 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e 348 (424)
..+.+++|+|++++.++...... ..|++|++.+|..++..|
T Consensus 218 -~~~~~~~dva~~v~~l~s~~~~~----------~tG~~~~vdgG~~~~~~~ 258 (261)
T 2wyu_A 218 -RRNITQEEVGNLGLFLLSPLASG----------ITGEVVYVDAGYHIMGME 258 (261)
T ss_dssp -SSCCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGBC--
T ss_pred -CCCCCHHHHHHHHHHHcChhhcC----------CCCCEEEECCCccccCCC
Confidence 12678999999999988654322 344899999886655443
No 108
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=99.95 E-value=9.9e-27 Score=219.21 Aligned_cols=233 Identities=15% Similarity=0.125 Sum_probs=172.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|++|||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++.+
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVE--KEGVKCVLLPGDLSDEQHCKDIVQETV 120 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--TTTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH--hcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999976533222222111 12457899999999999999988765
Q ss_pred ----CccEEEEcccccCchh-----hccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY-----AMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~-----~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++..... ..+||++||...+...
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------- 190 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN---------- 190 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC----------
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC----------
Confidence 6899999999754311 2334567999999999999999977532 2489999998877431
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|+++...... .......+ ........+
T Consensus 191 --~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~------------~~~~p~~r~ 255 (291)
T 3ijr_A 191 --ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQF------------GSNVPMQRP 255 (291)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS-CHHHHHHT------------TTTSTTSSC
T ss_pred --CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC-CHHHHHHH------------HccCCCCCC
Confidence 345789999999999999999875 899999999999987311000 00111111 112223447
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
.+++|+|++++.++...... ..|+++++.+|..+
T Consensus 256 ~~p~dvA~~v~~L~s~~~~~----------itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 256 GQPYELAPAYVYLASSDSSY----------VTGQMIHVNGGVIV 289 (291)
T ss_dssp BCGGGTHHHHHHHHSGGGTT----------CCSCEEEESSSCCC
T ss_pred cCHHHHHHHHHHHhCCccCC----------CcCCEEEECCCccc
Confidence 88999999999988765432 44589999887543
No 109
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=99.95 E-value=9.1e-27 Score=215.57 Aligned_cols=226 Identities=16% Similarity=0.118 Sum_probs=162.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|++|||||+|+||++++++|+++|++|++++|+.+..+...... ..++.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 4 QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL------GAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 468899999999999999999999999999999999876544332211 346899999999999999998865
Q ss_pred ---CccEEEEcccccCch--------hhccChHHHHHHHHHHHHHHHHHHHhcC---------CCCeEEEecCCcccCCC
Q 042406 154 ---AFTHVMHLAAQAGVR--------YAMQNPNSYVESNIAGFVNLLETCKSSD---------PQPAIVWASSSSVYGVN 213 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~--------~~~~~~~~~~~~N~~g~~~ll~a~~~~~---------~~~~~v~~SS~~vyg~~ 213 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.... ...+||++||...+...
T Consensus 78 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~ 157 (257)
T 3tpc_A 78 EFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQ 157 (257)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred HcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCC
Confidence 689999999986432 1223456789999999999988876531 22389999998776421
Q ss_pred CCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEec
Q 042406 214 KKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEA 290 (424)
Q Consensus 214 ~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (424)
.+...|++||++.+.+++.++.+ .|+++++|+||.|.++..... .......+...
T Consensus 158 ------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~-------- 215 (257)
T 3tpc_A 158 ------------IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGM--PQDVQDALAAS-------- 215 (257)
T ss_dssp ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CC--------
T ss_pred ------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccC--CHHHHHHHHhc--------
Confidence 34578999999999999999887 589999999999998743210 11111111111
Q ss_pred CCCCccc-cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 291 PDGASVA-RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 291 ~~~~~~~-~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
... ..+.+++|+|++++.++.... ..|+++++.+|..++
T Consensus 216 ----~p~~~r~~~~~dva~~v~~l~s~~~------------itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 216 ----VPFPPRLGRAEEYAALVKHICENTM------------LNGEVIRLDGALRMA 255 (257)
T ss_dssp ----SSSSCSCBCHHHHHHHHHHHHHCTT------------CCSCEEEESTTCCC-
T ss_pred ----CCCCCCCCCHHHHHHHHHHHcccCC------------cCCcEEEECCCccCC
Confidence 111 347899999999999886521 345899999886554
No 110
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=99.95 E-value=6.5e-27 Score=215.46 Aligned_cols=227 Identities=14% Similarity=0.106 Sum_probs=165.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++..
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH--AYADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHST--TTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999975433222211101 11346899999999999999988754
Q ss_pred CccEEEEcccccCchh-------hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY-------AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~-------~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.++.++++++ ++.+.+ +||++||...+...
T Consensus 80 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~iv~isS~~~~~~~--------- 149 (250)
T 2cfc_A 80 AIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAG-VIVNIASVASLVAF--------- 149 (250)
T ss_dssp CCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC---------
T ss_pred CCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC-EEEEECChhhccCC---------
Confidence 6799999999754321 22344678999999987766655 444544 99999998776421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|+.||.+.+.+++.++.++ |+++++||||.|+++..........+...+....+ ...
T Consensus 150 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~~ 214 (250)
T 2cfc_A 150 ---PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIP------------QKE 214 (250)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCT------------TCS
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCC------------CCC
Confidence 345789999999999999998775 89999999999999854310001122333333222 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+.+.+|+|++++.++..+... ..|+++++.+|.
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gG~ 247 (250)
T 2cfc_A 215 IGTAAQVADAVMFLAGEDATY----------VNGAALVMDGAY 247 (250)
T ss_dssp CBCHHHHHHHHHHHHSTTCTT----------CCSCEEEESTTG
T ss_pred CcCHHHHHHHHHHHcCchhhc----------ccCCEEEECCce
Confidence 789999999999988764321 334899998774
No 111
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=99.95 E-value=1.4e-27 Score=218.85 Aligned_cols=200 Identities=12% Similarity=0.054 Sum_probs=156.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
+++|+|+||||+|+||++++++|+++|+ +|++++|+.+..... ...++.++.+|++|.+++.++++++
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~---------~~~~~~~~~~D~~d~~~~~~~~~~~- 85 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE---------AYKNVNQEVVDFEKLDDYASAFQGH- 85 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG---------GGGGCEEEECCGGGGGGGGGGGSSC-
T ss_pred hcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc---------ccCCceEEecCcCCHHHHHHHhcCC-
Confidence 4678999999999999999999999999 999999976543221 1236889999999999999999865
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
|+||||||..... .+.+..+++|+.++.++++++++.+.+ +||++||.++|+. +...|+.+
T Consensus 86 -d~vi~~ag~~~~~---~~~~~~~~~n~~~~~~~~~~~~~~~~~-~iv~~SS~~~~~~--------------~~~~Y~~s 146 (242)
T 2bka_A 86 -DVGFCCLGTTRGK---AGAEGFVRVDRDYVLKSAELAKAGGCK-HFNLLSSKGADKS--------------SNFLYLQV 146 (242)
T ss_dssp -SEEEECCCCCHHH---HHHHHHHHHHTHHHHHHHHHHHHTTCC-EEEEECCTTCCTT--------------CSSHHHHH
T ss_pred -CEEEECCCccccc---CCcccceeeeHHHHHHHHHHHHHCCCC-EEEEEccCcCCCC--------------CcchHHHH
Confidence 9999999974322 235678999999999999999998865 9999999998862 34689999
Q ss_pred HHHHHHHHHHHHHHhCC-cEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHH
Q 042406 235 KKAGEAIAHAYNHIYGL-SITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAG 313 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i-~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~ 313 (424)
|.++|.+++.+ ++ ++++||||.+|||..... ....+........+. ......+++++|+|++++.+
T Consensus 147 K~~~e~~~~~~----~~~~~~~vrpg~v~~~~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~~~~dva~~~~~~ 213 (242)
T 2bka_A 147 KGEVEAKVEEL----KFDRYSVFRPGVLLCDRQESR-PGEWLVRKFFGSLPD--------SWASGHSVPVVTVVRAMLNN 213 (242)
T ss_dssp HHHHHHHHHTT----CCSEEEEEECCEEECTTGGGS-HHHHHHHHHHCSCCT--------TGGGGTEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhc----CCCCeEEEcCceecCCCCCCc-HHHHHHHHhhcccCc--------cccCCcccCHHHHHHHHHHH
Confidence 99999988764 78 699999999999965321 222333333322111 11123599999999999999
Q ss_pred hhhcc
Q 042406 314 LDTAK 318 (424)
Q Consensus 314 ~~~~~ 318 (424)
+.++.
T Consensus 214 ~~~~~ 218 (242)
T 2bka_A 214 VVRPR 218 (242)
T ss_dssp HTSCC
T ss_pred HhCcc
Confidence 98764
No 112
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=99.95 E-value=6.8e-27 Score=216.81 Aligned_cols=232 Identities=16% Similarity=0.090 Sum_probs=167.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc---
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV--- 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~--- 152 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.
T Consensus 6 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (260)
T 2ae2_A 6 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRS---KGFKVEASVCDLSSRSERQELMNTVAN 82 (260)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999976543332222211 134688999999999999888864
Q ss_pred ---cCccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 153 ---VAFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 153 ---~~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
-++|+||||||..... ...++.+..+++|+.|+.++++++. +.+.+ +||++||...+..
T Consensus 83 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~--------- 152 (260)
T 2ae2_A 83 HFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERG-NVVFISSVSGALA--------- 152 (260)
T ss_dssp HTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSE-EEEEECCGGGTSC---------
T ss_pred HcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEcchhhccC---------
Confidence 2679999999975432 1223446789999999999988874 44443 9999999877642
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC---CCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP---DMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
..+...|++||.+.+.+++.++.++ |+++++|+||.+.++.... .......+..+....
T Consensus 153 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------------ 217 (260)
T 2ae2_A 153 ---VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRC------------ 217 (260)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS------------
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcC------------
Confidence 1345789999999999999998875 8999999999998863110 000000000121111
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
....+.+++|+|++++.++...... ..|+++++.+|...+
T Consensus 218 ~~~~~~~~~dvA~~v~~l~s~~~~~----------~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 218 ALRRMGEPKELAAMVAFLCFPAASY----------VTGQIIYVDGGLMAN 257 (260)
T ss_dssp TTCSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGC
T ss_pred CCCCCCCHHHHHHHHHHHcCccccC----------CCCCEEEECCCcccc
Confidence 1224889999999999888654321 344899999886443
No 113
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=99.95 E-value=5.2e-27 Score=219.07 Aligned_cols=232 Identities=18% Similarity=0.123 Sum_probs=167.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC-CchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN-NYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
.+.+++|+|+||||+|+||++++++|+++|++|++++|.. +........... ...++.++.+|++|.++++++++.
T Consensus 16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~ 92 (274)
T 1ja9_A 16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKK---LGAQGVAIQADISKPSEVVALFDK 92 (274)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHH
Confidence 3457889999999999999999999999999999999943 222221111111 235788999999999999998875
Q ss_pred c-----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCccc-CCCCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVY-GVNKKVPFSEK 221 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vy-g~~~~~~~~e~ 221 (424)
+ ++|+||||||..... ...++.+..+++|+.|+.++++++.+... +++||++||.+.+ ...
T Consensus 93 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~-------- 164 (274)
T 1ja9_A 93 AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI-------- 164 (274)
T ss_dssp HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC--------
T ss_pred HHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCC--------
Confidence 4 679999999975432 12233467899999999999988876410 1399999998887 321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC-----------CCcHHHHHHHHHcCCceeE
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP-----------DMAYFFFTRDIIRGKRITV 287 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~-----------~~~~~~~~~~~~~~~~~~~ 287 (424)
.+...|+.||++.|.+++.++.++ |++++++|||.++++.... ......+...+..+
T Consensus 165 ----~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 235 (274)
T 1ja9_A 165 ----PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM----- 235 (274)
T ss_dssp ----CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHT-----
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhc-----
Confidence 345789999999999999998775 8999999999998863210 00001122222211
Q ss_pred EecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 288 YEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 288 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.....+++++|+|++++.++..+... ..|++|++++|.
T Consensus 236 -------~~~~~~~~~~dva~~i~~l~~~~~~~----------~~G~~~~v~gG~ 273 (274)
T 1ja9_A 236 -------NPLKRIGYPADIGRAVSALCQEESEW----------INGQVIKLTGGG 273 (274)
T ss_dssp -------STTSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTC
T ss_pred -------CCCCCccCHHHHHHHHHHHhCccccc----------ccCcEEEecCCc
Confidence 12345899999999999998765321 234899998863
No 114
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=99.95 E-value=3.2e-27 Score=219.01 Aligned_cols=233 Identities=10% Similarity=0.014 Sum_probs=168.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|+++||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++..
T Consensus 10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (260)
T 2zat_A 10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG---EGLSVTGTVCHVGKAEDRERLVAMAV 86 (260)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHHH
Confidence 346789999999999999999999999999999999976443332222211 1346889999999999999888754
Q ss_pred ----CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++. +.+.+ +||++||...|...
T Consensus 87 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~------- 158 (260)
T 2zat_A 87 NLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGG-SVLIVSSVGAYHPF------- 158 (260)
T ss_dssp HHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCGGGTSCC-------
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEEechhhcCCC-------
Confidence 67999999997531 11223346789999999988887764 44443 99999998887531
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.+...|+.||.+.+.+++.++.++ |+++++|+||.+.++..............+... ...
T Consensus 159 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------------~~~ 221 (260)
T 2zat_A 159 -----PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES------------LRI 221 (260)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH------------HTC
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc------------CCC
Confidence 345789999999999999998775 899999999999987432100000000111110 112
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
..+.+++|+|++++.++...... ..|++|++.+|...+
T Consensus 222 ~~~~~~~dva~~v~~l~s~~~~~----------~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 222 RRLGNPEDCAGIVSFLCSEDASY----------ITGETVVVGGGTASR 259 (260)
T ss_dssp SSCBCGGGGHHHHHHHTSGGGTT----------CCSCEEEESTTCCCC
T ss_pred CCCCCHHHHHHHHHHHcCcccCC----------ccCCEEEECCCcccc
Confidence 34789999999999988765422 334899999987665
No 115
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.95 E-value=1.4e-26 Score=217.08 Aligned_cols=238 Identities=15% Similarity=0.137 Sum_probs=169.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc---------hhhhHHHHHhh-hhccCCeEEEEccCCCH
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY---------YETSLKKARKG-LLERAGVFVIDADINDK 143 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~ 143 (424)
+.++++|+++||||+|+||++++++|+++|++|++++|+.+. ........... .....++.++.+|++|.
T Consensus 10 ~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~ 89 (280)
T 3pgx_A 10 AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDD 89 (280)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCH
Confidence 346789999999999999999999999999999999984210 01111111111 11245789999999999
Q ss_pred HHHHHHhhcc-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCccc
Q 042406 144 SLLDKIFNVV-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVY 210 (424)
Q Consensus 144 ~~v~~~~~~~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vy 210 (424)
++++++++.+ ++|+||||||...... ..++.+..+++|+.|+.++++++. +.+...+||++||...+
T Consensus 90 ~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 169 (280)
T 3pgx_A 90 AALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGL 169 (280)
T ss_dssp HHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhc
Confidence 9999998865 6899999999865432 223345789999999998888764 33323489999998776
Q ss_pred CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCC----
Q 042406 211 GVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGK---- 283 (424)
Q Consensus 211 g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~---- 283 (424)
... .....|++||++.+.+++.++.+ .|+++++|+||.|++|..... .+........
T Consensus 170 ~~~------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~ 233 (280)
T 3pgx_A 170 KAT------------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE----AMMEIFARHPSFVH 233 (280)
T ss_dssp SCC------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH----HHHHHHHHCGGGGG
T ss_pred cCC------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh----hhhhhhhcCchhhh
Confidence 421 34578999999999999999887 489999999999999865421 1111111111
Q ss_pred ceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 284 RITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 284 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..... ..... .+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 234 ~~~~~----~~~~~-r~~~p~dvA~~v~~L~s~~~~~----------itG~~i~vdGG~ 277 (280)
T 3pgx_A 234 SFPPM----PVQPN-GFMTADEVADVVAWLAGDGSGT----------LTGTQIPVDKGA 277 (280)
T ss_dssp GSCCB----TTBCS-SCBCHHHHHHHHHHHHSGGGTT----------CSSCEEEESTTG
T ss_pred hhhhc----ccCCC-CCCCHHHHHHHHHHHhCccccC----------CCCCEEEECCCc
Confidence 11111 11112 3899999999999988765432 345899998874
No 116
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=99.95 E-value=4.2e-27 Score=218.54 Aligned_cols=238 Identities=13% Similarity=0.031 Sum_probs=163.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhh----hhccCCeEEEEccCCCHHHHHHHhh
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKG----LLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+.+............ .....++.++.+|++|.++++++++
T Consensus 4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 83 (264)
T 2pd6_A 4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE 83 (264)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence 467899999999999999999999999999999999654322211111000 0011468999999999999999888
Q ss_pred cc-----Cc-cEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCC
Q 042406 152 VV-----AF-THVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVP 217 (424)
Q Consensus 152 ~~-----~~-d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~ 217 (424)
.+ ++ |+||||||..... ...++.+..+++|+.|+.++++++.+. +..++||++||...+..
T Consensus 84 ~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~----- 158 (264)
T 2pd6_A 84 QVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG----- 158 (264)
T ss_dssp HHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC-----
T ss_pred HHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC-----
Confidence 75 44 9999999986532 123345678999999999999887653 31238999999765431
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
..+...|+.||.+.+.+++.++.+ .|+++++||||.++++.... ....+...+..+
T Consensus 159 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~------------ 217 (264)
T 2pd6_A 159 -------NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQK--VPQKVVDKITEM------------ 217 (264)
T ss_dssp -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGG------------
T ss_pred -------CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhh--cCHHHHHHHHHh------------
Confidence 134578999999999999999877 58999999999999985431 011111111111
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHH
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRL 349 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el 349 (424)
.....+++++|+|++++.++...... ..|+.+++.+|..++....
T Consensus 218 ~~~~~~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 218 IPMGHLGDPEDVADVVAFLASEDSGY----------ITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp CTTCSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTC-------
T ss_pred CCCCCCCCHHHHHHHHHHHcCCcccC----------CCCCEEEECCCceeccccC
Confidence 11224789999999999988754321 3448999999876665544
No 117
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=99.95 E-value=7e-27 Score=215.76 Aligned_cols=229 Identities=19% Similarity=0.092 Sum_probs=164.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCe-EEEEccCCCHHHHHHHhhcc
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGV-FVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.++++|+++||||+|+||++++++|+++|++|++++|+.+..+..... . ..++ .++.+|++|.++++++++.+
T Consensus 7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (254)
T 2wsb_A 7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE-----L-GAAVAARIVADVTDAEAMTAAAAEA 80 (254)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----H-GGGEEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----h-cccceeEEEEecCCHHHHHHHHHHH
Confidence 346889999999999999999999999999999999965432221111 1 2355 88999999999999888653
Q ss_pred ----CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||....... .++.+..+++|+.|+.++++++ ++.+.+ +||++||...+....
T Consensus 81 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~iv~isS~~~~~~~~------- 152 (254)
T 2wsb_A 81 EAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAG-AIVNLGSMSGTIVNR------- 152 (254)
T ss_dssp HHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCCS-------
T ss_pred HhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEecchhccCCC-------
Confidence 67999999998654221 2223578999999977766654 445544 999999988765321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..+...|+.||++.|.+++.++.++ |+++++||||.++++........+.+...+....+ ..
T Consensus 153 ---~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~ 217 (254)
T 2wsb_A 153 ---PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTP------------MG 217 (254)
T ss_dssp ---SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTST------------TS
T ss_pred ---CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCC------------CC
Confidence 1334789999999999999998775 89999999999999732100000122222322211 13
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+++++|+|++++.++...... ..|+++++.+|.
T Consensus 218 ~~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gG~ 251 (254)
T 2wsb_A 218 RCGEPSEIAAAALFLASPAASY----------VTGAILAVDGGY 251 (254)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred CCCCHHHHHHHHHHHhCccccc----------ccCCEEEECCCE
Confidence 4889999999999988654321 334899998764
No 118
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=99.95 E-value=3.1e-27 Score=219.87 Aligned_cols=235 Identities=11% Similarity=0.035 Sum_probs=172.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+.++++|++|||||+|+||+++++.|+++|++|++++|+.+..+........ ....++.++.+|++|.++++++++.+
T Consensus 15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGE--QFGTDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999976554443332221 12467999999999999999888765
Q ss_pred -----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.. .+...+||++||...+..
T Consensus 93 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-------- 164 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP-------- 164 (266)
T ss_dssp HHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC--------
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC--------
Confidence 6899999999865322 2233457899999999888887643 332348999999887642
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++..............+....+ .
T Consensus 165 ----~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------------~ 228 (266)
T 4egf_A 165 ----LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIP------------L 228 (266)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCT------------T
T ss_pred ----CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCC------------C
Confidence 1445789999999999999998874 89999999999988632100000112222322221 1
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
..+.+++|+|++++.++...... ..|+++++.+|..+
T Consensus 229 ~r~~~p~dva~~v~~L~s~~~~~----------itG~~i~vdGG~~~ 265 (266)
T 4egf_A 229 GRFAVPHEVSDAVVWLASDAASM----------INGVDIPVDGGYTM 265 (266)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGG
T ss_pred CCCcCHHHHHHHHHHHhCchhcC----------ccCcEEEECCCccC
Confidence 23778999999999988765432 44589999987543
No 119
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=99.95 E-value=9.4e-27 Score=217.71 Aligned_cols=232 Identities=14% Similarity=0.057 Sum_probs=167.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|+.+........ . ..++.++.+|++|.++++++++.+
T Consensus 25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATK-----I-GCGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-----H-CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----c-CCcceEEEecCCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999965433322211 1 457899999999999999988865
Q ss_pred ----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.. .+. .+||++||...+..
T Consensus 99 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-g~Iv~isS~~~~~~--------- 168 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGG-GAIVNLSSLAGQVA--------- 168 (277)
T ss_dssp HHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-EEEEEECCGGGTSC---------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-cEEEEEcchhhccC---------
Confidence 789999999986542 22334467999999999888887643 443 38999999776542
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCC---Cc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDG---AS 295 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 295 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||.|++|.. ........-........ ..
T Consensus 169 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~----------~~~~~~~~~~~~~~~~~~~~~~ 235 (277)
T 3gvc_A 169 ---VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQ----------QTAMAMFDGALGAGGARSMIAR 235 (277)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH----------HHHHTCC------CCHHHHHHH
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchH----------HHhhhcchhhHHHHhhhhhhhc
Confidence 144578999999999999999877 489999999999998721 11111000000000000 01
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
....+.+++|+|++++.++...... ..|+++++.+|...+
T Consensus 236 ~~~r~~~pedvA~~v~~L~s~~a~~----------itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 236 LQGRMAAPEEMAGIVVFLLSDDASM----------ITGTTQIADGGTIAA 275 (277)
T ss_dssp HHSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGS
T ss_pred cccCCCCHHHHHHHHHHHcCCccCC----------ccCcEEEECCcchhc
Confidence 1234788999999999998765432 445899999886554
No 120
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.95 E-value=6.8e-27 Score=219.90 Aligned_cols=257 Identities=12% Similarity=0.084 Sum_probs=175.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch--------hhhHHHHHhh-hhccCCeEEEEccCCCHH
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--------ETSLKKARKG-LLERAGVFVIDADINDKS 144 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~ 144 (424)
+.++++|++|||||+|+||++++++|+++|++|++++|+.+.. .......... .....++.++.+|++|.+
T Consensus 5 m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 5 MGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRA 84 (287)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHH
T ss_pred ccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHH
Confidence 4467899999999999999999999999999999999973211 1111111111 112467899999999999
Q ss_pred HHHHHhhcc-----CccEEEEcccccCch--hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCC
Q 042406 145 LLDKIFNVV-----AFTHVMHLAAQAGVR--YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKV 216 (424)
Q Consensus 145 ~v~~~~~~~-----~~d~vi~~Ag~~~~~--~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~ 216 (424)
+++++++.+ ++|+||||||..... ...++.+..+++|+.|+.++++++..... ..+||++||...+......
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~ 164 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQP 164 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccccccc
Confidence 999988865 689999999986543 22334568999999999999999987532 2489999997776432222
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEE-----
Q 042406 217 PFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVY----- 288 (424)
Q Consensus 217 ~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~----- 288 (424)
+..+.. +..+...|++||.+.+.+++.++.++ |+++++|+||.|.++...... ..............
T Consensus 165 ~~~~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~~~~~~~~~ 239 (287)
T 3pxx_A 165 PGAGGP-QGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAP----MYRQFRPDLEAPSRADALL 239 (287)
T ss_dssp C------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHH----HHHHHCTTSSSCCHHHHHH
T ss_pred cccccc-CCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc----hhhhhccccccchhHHHHh
Confidence 222222 11345789999999999999999886 899999999999998553210 00111000000000
Q ss_pred ecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 289 EAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 289 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
..+........+.+++|+|++++.++...... ..|+++++.+|..++
T Consensus 240 ~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~----------itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 240 AFPAMQAMPTPYVEASDISNAVCFLASDESRY----------VTGLQFKVDAGAMLK 286 (287)
T ss_dssp HGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGG
T ss_pred hhhhhcccCCCCCCHHHHHhhHheecchhhcC----------CCCceEeECchhhhc
Confidence 00000011145899999999999988765432 445899999886543
No 121
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=99.95 E-value=6.1e-27 Score=208.79 Aligned_cols=203 Identities=14% Similarity=0.049 Sum_probs=155.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|+|+||||+|+||++++++|+++|++|++++|+.+... .....+++++.+|++|.+++.++++++ |+|
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~---------~~~~~~~~~~~~D~~~~~~~~~~~~~~--d~v 71 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP---------SEGPRPAHVVVGDVLQAADVDKTVAGQ--DAV 71 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSC---------SSSCCCSEEEESCTTSHHHHHHHHTTC--SEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcc---------cccCCceEEEEecCCCHHHHHHHHcCC--CEE
Confidence 479999999999999999999999999999999654221 112457899999999999999999976 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHH
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
||+||.... .++ .++|+.++.++++++++.+.+ +||++||.++|+.....+ .+...|+.+|.++
T Consensus 72 i~~a~~~~~----~~~---~~~n~~~~~~~~~~~~~~~~~-~~v~~Ss~~~~~~~~~~~--------~~~~~y~~~K~~~ 135 (206)
T 1hdo_A 72 IVLLGTRND----LSP---TTVMSEGARNIVAAMKAHGVD-KVVACTSAFLLWDPTKVP--------PRLQAVTDDHIRM 135 (206)
T ss_dssp EECCCCTTC----CSC---CCHHHHHHHHHHHHHHHHTCC-EEEEECCGGGTSCTTCSC--------GGGHHHHHHHHHH
T ss_pred EECccCCCC----CCc---cchHHHHHHHHHHHHHHhCCC-eEEEEeeeeeccCccccc--------ccchhHHHHHHHH
Confidence 999997543 111 248999999999999998875 999999999997533211 1457899999999
Q ss_pred HHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 239 EAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 239 e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
|.+++. .+++++++||+.+ +++.....+ ...+. +.+. .++++++|+|++++.+++++.
T Consensus 136 e~~~~~----~~i~~~~lrp~~~-~~~~~~~~~-------------~~~~~--~~~~--~~~i~~~Dva~~~~~~~~~~~ 193 (206)
T 1hdo_A 136 HKVLRE----SGLKYVAVMPPHI-GDQPLTGAY-------------TVTLD--GRGP--SRVISKHDLGHFMLRCLTTDE 193 (206)
T ss_dssp HHHHHH----TCSEEEEECCSEE-ECCCCCSCC-------------EEESS--SCSS--CSEEEHHHHHHHHHHTTSCST
T ss_pred HHHHHh----CCCCEEEEeCCcc-cCCCCCcce-------------Eeccc--CCCC--CCccCHHHHHHHHHHHhcCcc
Confidence 998853 5999999999998 332221110 01110 1111 479999999999999998753
Q ss_pred ccCCCCCCCCCCCCcceEEcCCCC
Q 042406 319 KSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+++|+++++.
T Consensus 194 ------------~~g~~~~i~~g~ 205 (206)
T 1hdo_A 194 ------------YDGHSTYPSHQY 205 (206)
T ss_dssp ------------TTTCEEEEECCC
T ss_pred ------------ccccceeeeccc
Confidence 233899999864
No 122
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=99.95 E-value=3e-26 Score=213.14 Aligned_cols=232 Identities=13% Similarity=0.074 Sum_probs=168.4
Q ss_pred CCCCCCCeEEEEcCCC-hhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 74 PRSTRGLTVLVTGAAG-FVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
...+++|+++||||+| +||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++.
T Consensus 17 ~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (266)
T 3o38_A 17 HGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLAD--LGLGRVEAVVCDVTSTEAVDALITQ 94 (266)
T ss_dssp CSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT--TCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHh--cCCCceEEEEeCCCCHHHHHHHHHH
Confidence 3457899999999987 799999999999999999999976554443333221 2345799999999999999999886
Q ss_pred c-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
+ ++|+||||||...... ..++.+..+++|+.++.++++++... +...+||++||...+..
T Consensus 95 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~------- 167 (266)
T 3o38_A 95 TVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRA------- 167 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCC-------
T ss_pred HHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCC-------
Confidence 6 7899999999865322 22334678999999999998887653 22348999999777542
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||.|.++...... .......+ .....
T Consensus 168 -----~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~------------~~~~~ 229 (266)
T 3o38_A 168 -----QHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS-SSELLDRL------------ASDEA 229 (266)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------------------CCT
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC-cHHHHHHH------------HhcCC
Confidence 145688999999999999999877 4899999999999987432110 00111111 11223
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 230 ~~r~~~~~dva~~i~~l~s~~~~~----------~tG~~i~vdgG~ 265 (266)
T 3o38_A 230 FGRAAEPWEVAATIAFLASDYSSY----------MTGEVVSVSSQR 265 (266)
T ss_dssp TSSCCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESSCC
T ss_pred cCCCCCHHHHHHHHHHHcCccccC----------ccCCEEEEcCCc
Confidence 345889999999999988765432 445899998864
No 123
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=99.95 E-value=8.2e-27 Score=216.88 Aligned_cols=231 Identities=13% Similarity=0.090 Sum_probs=170.1
Q ss_pred CCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 77 TRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 77 ~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+++|+++||||+ |+||++++++|+++|++|++++|+. ............ .....++.+|++|.++++++++.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~ 82 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ---LGSDIVLQCDVAEDASIDTMFAELG 82 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHh---cCCcEEEEccCCCHHHHHHHHHHHH
Confidence 678999999999 9999999999999999999999976 222222222211 123478999999999999988755
Q ss_pred ----CccEEEEcccccCc-----h----hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV-----R----YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~-----~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||.... . ...++.+..+++|+.|+.++++++.+... ..+||++||.+.+...
T Consensus 83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~------ 156 (265)
T 1qsg_A 83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI------ 156 (265)
T ss_dssp TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC------
T ss_pred HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC------
Confidence 67999999998642 1 22334567999999999999999977531 1389999997776421
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|+++..........+...+....++
T Consensus 157 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~----------- 219 (265)
T 1qsg_A 157 ------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI----------- 219 (265)
T ss_dssp ------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT-----------
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC-----------
Confidence 345789999999999999998875 899999999999998543211122333333322221
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
..+.+++|+|++++.++...... ..|++|++.+|..++
T Consensus 220 -~~~~~~~dva~~v~~l~s~~~~~----------~tG~~~~vdgG~~~~ 257 (265)
T 1qsg_A 220 -RRTVTIEDVGNSAAFLCSDLSAG----------ISGEVVHVDGGFSIA 257 (265)
T ss_dssp -SSCCCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTGGGB
T ss_pred -CCCCCHHHHHHHHHHHhCchhcC----------ccCCEEEECCCcCCC
Confidence 13678999999999988754322 344899999886544
No 124
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=99.95 E-value=2.9e-26 Score=210.85 Aligned_cols=229 Identities=14% Similarity=0.054 Sum_probs=171.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKE---KGFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999976544333222221 2357899999999999999988865
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.. .+.+ +||++||...+...
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~~--------- 148 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWG-RIISIGSVVGSAGN--------- 148 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCTHHHHCC---------
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe-EEEEEcchhhccCC---------
Confidence 6899999999865422 2334467999999999988887643 3433 89999997765421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|++||.+.+.+++.++.++ |+++++|+||.|.++....- .......+.... ....
T Consensus 149 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~------------~~~~ 211 (247)
T 3lyl_A 149 ---PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL--TDEQKSFIATKI------------PSGQ 211 (247)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--CHHHHHHHHTTS------------TTCC
T ss_pred ---CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc--cHHHHHHHhhcC------------CCCC
Confidence 346789999999999999998764 89999999999998754321 122222222221 2234
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
+.+++|+|++++.++...... ..|++|++.+|..+
T Consensus 212 ~~~~~dva~~i~~l~s~~~~~----------~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 212 IGEPKDIAAAVAFLASEEAKY----------ITGQTLHVNGGMYM 246 (247)
T ss_dssp CBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTSSC
T ss_pred CcCHHHHHHHHHHHhCCCcCC----------ccCCEEEECCCEec
Confidence 889999999999988765432 34589999987644
No 125
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=99.95 E-value=2.4e-26 Score=213.00 Aligned_cols=223 Identities=16% Similarity=0.135 Sum_probs=159.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++++|++|||||+|+||+++++.|+++|++|++++|+.+....... ..++.++.+|++|.++++++++.+
T Consensus 22 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~ 93 (260)
T 3gem_A 22 HMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR--------QAGAVALYGDFSCETGIMAFIDLL 93 (260)
T ss_dssp -----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH--------HHTCEEEECCTTSHHHHHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH--------hcCCeEEECCCCCHHHHHHHHHHH
Confidence 456789999999999999999999999999999999998764322111 124789999999999999988765
Q ss_pred -----CccEEEEcccccCchh---hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY---AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~---~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.. .+. .+||++||...+..
T Consensus 94 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~-g~iv~isS~~~~~~--------- 163 (260)
T 3gem_A 94 KTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEV-ADIVHISDDVTRKG--------- 163 (260)
T ss_dssp HHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSS-CEEEEECCGGGGTC---------
T ss_pred HHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-cEEEEECChhhcCC---------
Confidence 6899999999864332 1223357999999999998887743 343 38999999877642
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|++||++.+.+++.++.++ ++++++|+||.|.++..... .....+....+. .-
T Consensus 164 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~----~~~~~~~~~~p~------------~r 224 (260)
T 3gem_A 164 ---SSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA----AYRANALAKSAL------------GI 224 (260)
T ss_dssp ---CSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------CCS------------CC
T ss_pred ---CCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH----HHHHHHHhcCCC------------CC
Confidence 1445789999999999999999876 59999999999988743211 112222222211 12
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
+..++|+|++++.+++... ..|+++++.+|..++
T Consensus 225 ~~~~edva~~v~~L~~~~~------------itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 225 EPGAEVIYQSLRYLLDSTY------------VTGTTLTVNGGRHVK 258 (260)
T ss_dssp CCCTHHHHHHHHHHHHCSS------------CCSCEEEESTTTTTC
T ss_pred CCCHHHHHHHHHHHhhCCC------------CCCCEEEECCCcccC
Confidence 5568999999999984322 445899999987654
No 126
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=99.95 E-value=6.7e-27 Score=221.90 Aligned_cols=235 Identities=17% Similarity=0.229 Sum_probs=171.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC-Cchhh-hHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN-NYYET-SLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+|+|+||||||+||++++++|+++|++|++++|+. ....+ ..... ...+...+++++.+|++|.+++.++++++ |
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~l~~~~v~~v~~D~~d~~~l~~~~~~~--d 78 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEEL-IDNYQSLGVILLEGDINDHETLVKAIKQV--D 78 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHH-HHHHHHTTCEEEECCTTCHHHHHHHHTTC--S
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHH-HHHHHhCCCEEEEeCCCCHHHHHHHHhCC--C
Confidence 57899999999999999999999999999999976 11111 11111 11122357899999999999999999976 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCC-CChHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQP-ASLYAAT 234 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~-~~~Y~~s 234 (424)
+|||+|+... +.++.+++++|++.+ ++ +||+ | +||... ++..+. .| ...| .+
T Consensus 79 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~-~~v~-S---~~g~~~----~~~~~~-~p~~~~y-~s 132 (307)
T 2gas_A 79 IVICAAGRLL---------------IEDQVKIIKAIKEAGNVK-KFFP-S---EFGLDV----DRHDAV-EPVRQVF-EE 132 (307)
T ss_dssp EEEECSSSSC---------------GGGHHHHHHHHHHHCCCS-EEEC-S---CCSSCT----TSCCCC-TTHHHHH-HH
T ss_pred EEEECCcccc---------------cccHHHHHHHHHhcCCce-EEee-c---ccccCc----ccccCC-CcchhHH-HH
Confidence 9999998643 346788999999998 75 8873 3 455321 122222 23 4578 99
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHH---HHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRD---IIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
|.++|.+++. .+++++++||+.++++.... +... ...++.+.++ ++++..+++++++|+|++++
T Consensus 133 K~~~e~~~~~----~~i~~~~lrp~~~~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~Dva~~~~ 199 (307)
T 2gas_A 133 KASIRRVIEA----EGVPYTYLCCHAFTGYFLRN------LAQLDATDPPRDKVVIL---GDGNVKGAYVTEADVGTFTI 199 (307)
T ss_dssp HHHHHHHHHH----HTCCBEEEECCEETTTTGGG------TTCTTCSSCCSSEEEEE---TTSCSEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCCeEEEEcceeecccccc------ccccccccCCCCeEEEe---cCCCcceEEeeHHHHHHHHH
Confidence 9999988764 38999999999998863211 1100 1133344444 56788899999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCC-CCcccHHHHHHHHHHHhCccccccccc
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGN-TTPVPVSRLVSLLEKILKVKAETKVLP 367 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 367 (424)
.++..+.. .+++|++.+ ++.+|+.|+++.+++.+|.+.+....|
T Consensus 200 ~~l~~~~~------------~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 244 (307)
T 2gas_A 200 RAANDPNT------------LNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVS 244 (307)
T ss_dssp HHHTCGGG------------TTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEEC
T ss_pred HHHcCccc------------cCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecC
Confidence 99987542 127788876 468999999999999999887655443
No 127
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=99.95 E-value=2.9e-26 Score=214.11 Aligned_cols=230 Identities=15% Similarity=0.080 Sum_probs=164.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc---
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV--- 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~--- 152 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 94 (273)
T 1ae1_A 18 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE---KGLNVEGSVCDLLSRTERDKLMQTVAH 94 (273)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999976443332222211 135789999999999999888864
Q ss_pred ---cCccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 153 ---VAFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 153 ---~~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
-++|+||||||...... ..++.+..+++|+.|+.++++++. +.+.+ +||++||...+...
T Consensus 95 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g-~iv~isS~~~~~~~-------- 165 (273)
T 1ae1_A 95 VFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNG-NVIFLSSIAGFSAL-------- 165 (273)
T ss_dssp HTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSE-EEEEECCGGGTSCC--------
T ss_pred HcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEcCHhhcCCC--------
Confidence 26799999999854321 223446789999999999988773 34443 99999998887531
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCc----HHHHHHHHHcCCceeEEecCCCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMA----YFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|++|....... .......+....+
T Consensus 166 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p---------- 231 (273)
T 1ae1_A 166 ----PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTP---------- 231 (273)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHST----------
T ss_pred ----CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCC----------
Confidence 345789999999999999998775 8999999999999985321100 0111222221111
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
...+.+++|+|++++.++...... ..|+++++.+|..
T Consensus 232 --~~r~~~p~dvA~~v~~l~s~~~~~----------~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 232 --MGRAGKPQEVSALIAFLCFPAASY----------ITGQIIWADGGFT 268 (273)
T ss_dssp --TCSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGG
T ss_pred --CCCCcCHHHHHHHHHHHhCccccC----------cCCCEEEECCCcc
Confidence 113788999999999888654322 3448999988753
No 128
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=99.95 E-value=3.2e-26 Score=210.84 Aligned_cols=227 Identities=12% Similarity=0.038 Sum_probs=163.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
....++|+||||||+|+||+++++.|+++|++|++++|+.+........ ...++.++.+|++|.+++.+++++.
T Consensus 9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA------LKDNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HCSSEEEEECCTTSHHHHHHHHHTC
T ss_pred cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH------hccCccEEEcCCCCHHHHHHHHHhc
Confidence 4567899999999999999999999999999999999965433222111 1247899999999999999999876
Q ss_pred -CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++. +.+.+ +||++||...+...
T Consensus 83 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~~----------- 150 (249)
T 3f9i_A 83 SNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYG-RIINISSIVGIAGN----------- 150 (249)
T ss_dssp SCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCCCC--CC-----------
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc-EEEEEccHHhccCC-----------
Confidence 689999999986532 3345668899999999988877764 34433 89999998776421
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.+...|+.||++.+.+++.++.++ |+++++|+||.|.++..... .......+..+. ....+.
T Consensus 151 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~------------~~~~~~ 215 (249)
T 3f9i_A 151 -PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKI------------PLGTYG 215 (249)
T ss_dssp -SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C--CHHHHHHHHHHC------------TTCSCB
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc--CHHHHHHHHhcC------------CCCCCc
Confidence 345789999999999999998764 89999999999998754321 122222222221 123488
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+++|+|++++.++...... ..|++|++.+|..
T Consensus 216 ~~~dva~~~~~l~s~~~~~----------~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 216 IPEDVAYAVAFLASNNASY----------ITGQTLHVNGGML 247 (249)
T ss_dssp CHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTSS
T ss_pred CHHHHHHHHHHHcCCccCC----------ccCcEEEECCCEe
Confidence 8999999999998765432 3458999998753
No 129
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.95 E-value=1.5e-26 Score=214.92 Aligned_cols=229 Identities=12% Similarity=0.111 Sum_probs=170.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|++|||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++.+|++|.++++++++.+
T Consensus 8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD---TGRRALSVGTDITDDAQVAHLVDETMK 84 (264)
T ss_dssp TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999976544443333222 2457899999999999999988865
Q ss_pred ---CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++.. .+ .+||++||...+..
T Consensus 85 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~--------- 153 (264)
T 3ucx_A 85 AYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVRHS--------- 153 (264)
T ss_dssp HTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGGCC---------
T ss_pred HcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhccC---------
Confidence 78999999987532 112234467899999999999887643 33 39999999877642
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCC---------CcHHHHHHHHHcCCceeEEe
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPD---------MAYFFFTRDIIRGKRITVYE 289 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 289 (424)
..+...|+.||++.+.+++.++.+ .|+++++|+||.|++|..... .....+...+..+.
T Consensus 154 ---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 224 (264)
T 3ucx_A 154 ---QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS------ 224 (264)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS------
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC------
Confidence 144578999999999999999887 489999999999998732100 00111222222221
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
....+.+++|+|++++.++...... ..|+++++.+|..
T Consensus 225 ------p~~r~~~p~dvA~~v~~L~s~~~~~----------itG~~i~vdGG~~ 262 (264)
T 3ucx_A 225 ------DLKRLPTEDEVASAILFMASDLASG----------ITGQALDVNCGEY 262 (264)
T ss_dssp ------SSSSCCBHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTSS
T ss_pred ------CcccCCCHHHHHHHHHHHcCccccC----------CCCCEEEECCCcc
Confidence 2234789999999999988765432 4458999998863
No 130
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=99.95 E-value=8e-27 Score=215.64 Aligned_cols=232 Identities=14% Similarity=0.036 Sum_probs=173.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||++++++|+++|++|++++|+.+........ . ..++.++.+|++|.++++++++.+
T Consensus 5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (255)
T 4eso_A 5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREE-----F-GPRVHALRSDIADLNEIAVLGAAAGQ 78 (255)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----H-GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----h-CCcceEEEccCCCHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999975433222211 1 357899999999999999888765
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++..... ..+||++||...+...
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 146 (255)
T 4eso_A 79 TLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH------------ 146 (255)
T ss_dssp HHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC------------
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC------------
Confidence 6899999999865322 2334467899999999999999876421 2389999998776531
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcH----HHHHHHHHcCCceeEEecCCCCcccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAY----FFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|.+|........ ..+........+ ..
T Consensus 147 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p------------~~ 214 (255)
T 4eso_A 147 PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITP------------MK 214 (255)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHST------------TS
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCC------------CC
Confidence 346789999999999999999875 89999999999999854321111 112222222111 12
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHH
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSR 348 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e 348 (424)
.+.+++|+|++++.++.. ... ..|+++++.+|...++.+
T Consensus 215 r~~~pedvA~~v~~L~s~-~~~----------itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 215 RNGTADEVARAVLFLAFE-ATF----------TTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp SCBCHHHHHHHHHHHHHT-CTT----------CCSCEEEESTTTTTTBCC
T ss_pred CCcCHHHHHHHHHHHcCc-CcC----------ccCCEEEECCCccccCcC
Confidence 367899999999988875 221 345899999987766544
No 131
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=99.95 E-value=4.9e-26 Score=213.89 Aligned_cols=229 Identities=13% Similarity=0.078 Sum_probs=167.9
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++|+++||||+ |+||+++++.|+++|++|++++|+.+ ........... ..++.++.+|++|.++++++++.+
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~ 93 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKG---FGSDLVVKCDVSLDEDIKNLKKFL 93 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHHHH
Confidence 3678999999999 99999999999999999999999763 22222222211 124789999999999999988765
Q ss_pred -----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEecCCcccCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSDP--QPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~--~~~~v~~SS~~vyg~~~~~~~ 218 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++..... .++||++||.+.+...
T Consensus 94 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~----- 168 (285)
T 2p91_A 94 EENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV----- 168 (285)
T ss_dssp HHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC-----
T ss_pred HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC-----
Confidence 68999999998643 112233467999999999999999876532 2499999997765421
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|+++..........+...+....+.
T Consensus 169 -------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~---------- 231 (285)
T 2p91_A 169 -------PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF---------- 231 (285)
T ss_dssp -------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT----------
T ss_pred -------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC----------
Confidence 345789999999999999998775 899999999999998643211122333333222211
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+.+++|+|++++.++...... ..|++|++.+|.
T Consensus 232 --~~~~~~~dva~~~~~l~s~~~~~----------~tG~~~~vdgg~ 266 (285)
T 2p91_A 232 --GKPITIEDVGDTAVFLCSDWARA----------ITGEVVHVDNGY 266 (285)
T ss_dssp --SSCCCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTG
T ss_pred --CCCcCHHHHHHHHHHHcCCcccC----------CCCCEEEECCCc
Confidence 12678999999999988654321 334899998874
No 132
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=99.95 E-value=1.7e-26 Score=216.33 Aligned_cols=235 Identities=13% Similarity=0.072 Sum_probs=173.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|++|||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (280)
T 3tox_A 5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG---GGGEAAALAGDVGDEALHEALVELAVR 81 (280)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT---TTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999976544333322211 2457899999999999999988865
Q ss_pred ---CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||+... ....++.+..+++|+.|+.++++++.. .+. .+||++||...+..
T Consensus 82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~--------- 151 (280)
T 3tox_A 82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGG-GSLTFTSSFVGHTA--------- 151 (280)
T ss_dssp HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-EEEEEECCSBTTTB---------
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-CEEEEEcChhhCcC---------
Confidence 68999999997532 122334567999999999998887643 343 39999999877621
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC--CcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD--MAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
...+...|++||++.+.+++.++.++ |+++++|+||.|.+|..... ...+.....+....+
T Consensus 152 --~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------------ 217 (280)
T 3tox_A 152 --GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA------------ 217 (280)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST------------
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc------------
Confidence 11446789999999999999999875 89999999999999854210 001122222322221
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHH
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVS 347 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~ 347 (424)
...+.+++|+|++++.++...... ..|+++++.+|..++..
T Consensus 218 ~~r~~~pedvA~~v~~L~s~~a~~----------itG~~i~vdGG~~~~~~ 258 (280)
T 3tox_A 218 LKRIARPEEIAEAALYLASDGASF----------VTGAALLADGGASVTKA 258 (280)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGCC-
T ss_pred cCCCcCHHHHHHHHHHHhCccccC----------CcCcEEEECCCcccccc
Confidence 223788999999999998765432 44589999998766543
No 133
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=99.95 E-value=2.1e-26 Score=213.96 Aligned_cols=232 Identities=14% Similarity=0.064 Sum_probs=167.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
..+|+++||||+|+||++++++|+++|++|++++|+............. ....++.++.+|++|.++++++++.+
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYK--DVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTG--GGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH--hcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999998876543332222211 12357999999999999999998865
Q ss_pred --CccEEEEccccc--Cc----hhhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQA--GV----RYAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 --~~d~vi~~Ag~~--~~----~~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.. .. ....++.+..+++|+.|+.++++++ ++.+.+ +||++||.+.++..
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~iss~~~~~~~-------- 153 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFG-RIINYGFQGADSAP-------- 153 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCTTGGGCC--------
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCC-eEEEEeechhcccC--------
Confidence 789999999942 11 1122334678999999999998887 555544 89999998655321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
...+...|++||++.+.+++.++.+ .|+++++|+||.|+++..... ........... ....
T Consensus 154 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~------------~p~~ 217 (264)
T 3i4f_A 154 --GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT--IQEARQLKEHN------------TPIG 217 (264)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC--HHHHHHC--------------------
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc--cHHHHHHHhhc------------CCCC
Confidence 1145578999999999999999877 489999999999999854321 22221111111 1122
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
.+.+++|+|++++.++...... ..|+++++.+|-...
T Consensus 218 r~~~~~dva~~v~~l~s~~~~~----------itG~~i~vdGG~~~~ 254 (264)
T 3i4f_A 218 RSGTGEDIARTISFLCEDDSDM----------ITGTIIEVTGAVDVI 254 (264)
T ss_dssp CCCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESCSCCCC
T ss_pred CCcCHHHHHHHHHHHcCcccCC----------CCCcEEEEcCceeec
Confidence 3788999999999998765432 345899999876543
No 134
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=99.95 E-value=3.4e-26 Score=213.07 Aligned_cols=229 Identities=13% Similarity=0.084 Sum_probs=168.6
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|.............. ....++.++.+|++|.++++++++.+
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~d~~~v~~~~~~~~ 101 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIA--AAGGEAFAVKADVSQESEVEALFAAVI 101 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--HTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH--hcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999854322221111111 12457899999999999999988865
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+.+ +||++||...+...
T Consensus 102 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~~-------- 172 (269)
T 4dmm_A 102 ERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSG-RIINIASVVGEMGN-------- 172 (269)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCHHHHHCC--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECchhhcCCC--------
Confidence 7899999999865322 233446799999999998888763 34443 99999997665321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.....|++||++.+.+++.++.++ |+++++|+||.|.++.... .....+....+ ..
T Consensus 173 ----~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-----~~~~~~~~~~p------------~~ 231 (269)
T 4dmm_A 173 ----PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE-----LAAEKLLEVIP------------LG 231 (269)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH-----HHHHHHGGGCT------------TS
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc-----ccHHHHHhcCC------------CC
Confidence 345789999999999999998764 8999999999999885431 11122222211 22
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
.+.+++|+|++++.++..+.... ..|+++++.+|..+
T Consensus 232 r~~~~~dvA~~v~~l~s~~~~~~---------itG~~i~vdGG~~~ 268 (269)
T 4dmm_A 232 RYGEAAEVAGVVRFLAADPAAAY---------ITGQVINIDGGLVM 268 (269)
T ss_dssp SCBCHHHHHHHHHHHHHCGGGGG---------CCSCEEEESTTSCC
T ss_pred CCCCHHHHHHHHHHHhCCcccCC---------CcCCEEEECCCeec
Confidence 37889999999999988643211 34589999988654
No 135
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=99.95 E-value=2.5e-26 Score=211.08 Aligned_cols=225 Identities=10% Similarity=0.096 Sum_probs=155.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-eCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+++|+|+||||+|+||++++++|+++|++|+++ .|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA---AGINVVVAKGDVKNPEDVENMVKTAMD 79 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHH---TTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999 5554433322222111 2357899999999999999988854
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCc-ccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSS-VYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~-vyg~~~~~~~~e~ 221 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.+ .+.+ +||++||.. .|+.
T Consensus 80 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~~~~~--------- 149 (247)
T 2hq1_A 80 AFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSG-KIINITSIAGIIGN--------- 149 (247)
T ss_dssp HHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCE-EEEEECC----------------
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCc-EEEEEcChhhccCC---------
Confidence 679999999986432 23445678999999998888777653 4444 999999964 4442
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.+...|+.||++.|.+++.++.++ |+++++++||.+.++.... ....+...+..+. ...
T Consensus 150 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~------------~~~ 211 (247)
T 2hq1_A 150 ----AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV--LPDKVKEMYLNNI------------PLK 211 (247)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--SCHHHHHHHHTTS------------TTS
T ss_pred ----CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh--cchHHHHHHHhhC------------CCC
Confidence 345789999999999999998775 8999999999998763211 1112222222221 123
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+++++|+|++++.++..+... ..|++|++.+|.
T Consensus 212 ~~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gG~ 245 (247)
T 2hq1_A 212 RFGTPEEVANVVGFLASDDSNY----------ITGQVINIDGGL 245 (247)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTC
T ss_pred CCCCHHHHHHHHHHHcCccccc----------ccCcEEEeCCCc
Confidence 4889999999999888764321 234899998874
No 136
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=99.95 E-value=1.5e-26 Score=214.60 Aligned_cols=234 Identities=14% Similarity=0.070 Sum_probs=161.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+++++|+++||||+|+||++++++|+++|++|++++|+.+..+..... ....+.++.+|++|.++++++++.+
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGE------IGDAALAVAADISKEADVDAAVEAAL 78 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HCTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH------hCCceEEEEecCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999975443332221 1357899999999999999988865
Q ss_pred ----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHHhcC-------CCCeEEEecCCcccCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCKSSD-------PQPAIVWASSSSVYGVNKKVP 217 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~~~-------~~~~~v~~SS~~vyg~~~~~~ 217 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.... ...+||++||...+..
T Consensus 79 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~----- 153 (261)
T 3n74_A 79 SKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRP----- 153 (261)
T ss_dssp HHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSC-----
T ss_pred HhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCC-----
Confidence 789999999986421 1223346789999999888877764321 1236999999877642
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
......|++||++.+.+++.++.++ |+++++|+||.+.++.... +...... .....+ ...
T Consensus 154 -------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~~~~~~~-~~~~~~---~~~ 216 (261)
T 3n74_A 154 -------RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTT------FMGEDSE-EIRKKF---RDS 216 (261)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhh------hcccCcH-HHHHHH---hhc
Confidence 1345779999999999999998874 8999999999999874321 1000000 000001 112
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccH
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPV 346 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~ 346 (424)
.....+++++|+|++++.++...... ..|+++++.+|..++.
T Consensus 217 ~~~~~~~~~~dva~~~~~l~s~~~~~----------itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 217 IPMGRLLKPDDLAEAAAFLCSPQASM----------ITGVALDVDGGRSIGG 258 (261)
T ss_dssp CTTSSCCCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTTTC--
T ss_pred CCcCCCcCHHHHHHHHHHHcCCcccC----------cCCcEEEecCCcccCC
Confidence 22345899999999999988654432 4458999999876654
No 137
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=99.95 E-value=5.5e-27 Score=224.02 Aligned_cols=236 Identities=14% Similarity=0.156 Sum_probs=172.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC-CchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN-NYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
.+|+|+||||+|+||++++++|+++|++|++++|+. +......... ...+...+++++.+|++|.+++.++++++ |
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-l~~~~~~~v~~v~~D~~d~~~l~~a~~~~--d 79 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQL-REEFRSMGVTIIEGEMEEHEKMVSVLKQV--D 79 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHH-HHHHHHTTCEEEECCTTCHHHHHHHHTTC--S
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHH-HHHhhcCCcEEEEecCCCHHHHHHHHcCC--C
Confidence 357899999999999999999999999999999976 2211111111 11112357999999999999999999976 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCC-CChHHHH
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQP-ASLYAAT 234 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~-~~~Y~~s 234 (424)
+|||+|+... +.++.+++++|++.+ ++ +||+ | +||... ++..+. .| .+.| .+
T Consensus 80 ~vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~-~~v~-S---~~g~~~----~~~~~~-~p~~~~y-~s 133 (321)
T 3c1o_A 80 IVISALPFPM---------------ISSQIHIINAIKAAGNIK-RFLP-S---DFGCEE----DRIKPL-PPFESVL-EK 133 (321)
T ss_dssp EEEECCCGGG---------------SGGGHHHHHHHHHHCCCC-EEEC-S---CCSSCG----GGCCCC-HHHHHHH-HH
T ss_pred EEEECCCccc---------------hhhHHHHHHHHHHhCCcc-EEec-c---ccccCc----cccccC-CCcchHH-HH
Confidence 9999998632 456789999999998 75 8872 3 455321 222221 22 4579 99
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHH---HHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 235 KKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTR---DIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 235 K~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
|.++|.+++. .++++++|||+.++++. ...+.. ....++.+.++ ++++..++++|++|+|++++
T Consensus 134 K~~~e~~~~~----~~~~~~~lrp~~~~~~~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~Dva~~~~ 200 (321)
T 3c1o_A 134 KRIIRRAIEA----AALPYTYVSANCFGAYF------VNYLLHPSPHPNRNDDIVIY---GTGETKFVLNYEEDIAKYTI 200 (321)
T ss_dssp HHHHHHHHHH----HTCCBEEEECCEEHHHH------HHHHHCCCSSCCTTSCEEEE---TTSCCEEEEECHHHHHHHHH
T ss_pred HHHHHHHHHH----cCCCeEEEEeceecccc------ccccccccccccccCceEEe---cCCCcceeEeeHHHHHHHHH
Confidence 9999988864 38999999999988751 111111 01233445555 56788999999999999999
Q ss_pred HHhhhccccCCCCCCCCCCCCcceEEcCC-CCcccHHHHHHHHHHHhCccccccccc
Q 042406 312 AGLDTAKKSTGSGGKKKGPAEFRIFNLGN-TTPVPVSRLVSLLEKILKVKAETKVLP 367 (424)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 367 (424)
.++..+.. .+++|++.+ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 201 ~~l~~~~~------------~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~ 245 (321)
T 3c1o_A 201 KVACDPRC------------CNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMP 245 (321)
T ss_dssp HHHHCGGG------------TTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEEC
T ss_pred HHHhCccc------------cCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCC
Confidence 99987542 127888876 578999999999999999887655443
No 138
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=99.95 E-value=5.9e-26 Score=209.20 Aligned_cols=227 Identities=16% Similarity=0.089 Sum_probs=155.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+. ...++.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-------------~~~~~~~~~~D~~d~~~~~~~~~~~~~ 70 (250)
T 2fwm_X 4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-------------EQYPFATEVMDVADAAQVAQVCQRLLA 70 (250)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-------------SCCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-------------hcCCceEEEcCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999996541 0113789999999999999988754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+..
T Consensus 71 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g-~iv~isS~~~~~~---------- 139 (250)
T 2fwm_X 71 ETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGG-AIVTVASDAAHTP---------- 139 (250)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCGGGTSC----------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCC-EEEEECchhhCCC----------
Confidence 6799999999854321 23345679999999999988877 444544 9999999877642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHH-HHHcCCceeEEecCCCCcccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTR-DIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..+...|++||.+.+.+++.++.++ |+++++|+||.++++............. .+.... ..+ .......
T Consensus 140 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~p~~ 212 (250)
T 2fwm_X 140 --RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFG--EQF---KLGIPLG 212 (250)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------------------
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhh--hcc---cccCCCC
Confidence 1345789999999999999998774 8999999999999985321100000000 000000 000 0001112
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.+.+.+|+|++++.++...... ..|+++++.+|..
T Consensus 213 ~~~~p~dvA~~v~~l~s~~~~~----------~tG~~i~vdGG~~ 247 (250)
T 2fwm_X 213 KIARPQEIANTILFLASDLASH----------ITLQDIVVDGGST 247 (250)
T ss_dssp ---CHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTTT
T ss_pred CCcCHHHHHHHHHHHhCccccC----------CCCCEEEECCCcc
Confidence 3789999999999988765422 3448999988754
No 139
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=99.95 E-value=1.9e-26 Score=215.92 Aligned_cols=230 Identities=14% Similarity=0.071 Sum_probs=166.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (279)
T 3sju_A 20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA---AGHDVDGSSCDVTSTDEVHAAVAAAV 96 (279)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999976544443332222 2457899999999999999988765
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh------cCCCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS------SDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~------~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.. .+.+ +||++||...+..
T Consensus 97 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g-~iV~isS~~~~~~------- 168 (279)
T 3sju_A 97 ERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWG-RIVNIASTGGKQG------- 168 (279)
T ss_dssp HHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCE-EEEEECCGGGTSC-------
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCc-EEEEECChhhccC-------
Confidence 6899999999865322 2223457899999999999887654 3433 8999999877642
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCC---------CCcHHHHHHHHHcCCceeE
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRP---------DMAYFFFTRDIIRGKRITV 287 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~ 287 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||.|.++.... ..........+....
T Consensus 169 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 239 (279)
T 3sju_A 169 -----VMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI---- 239 (279)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC----
T ss_pred -----CCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC----
Confidence 144578999999999999999987 48999999999998762110 000112222222221
Q ss_pred EecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 288 YEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 288 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
....+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 240 --------p~~r~~~pedvA~~v~~L~s~~a~~----------itG~~i~vdGG~ 276 (279)
T 3sju_A 240 --------PLGRYSTPEEVAGLVGYLVTDAAAS----------ITAQALNVCGGL 276 (279)
T ss_dssp --------TTSSCBCHHHHHHHHHHHTSSGGGG----------CCSCEEEESTTC
T ss_pred --------CCCCCCCHHHHHHHHHHHhCccccC----------cCCcEEEECCCc
Confidence 1234788999999999888765432 445899998875
No 140
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=99.95 E-value=1.2e-26 Score=216.24 Aligned_cols=240 Identities=11% Similarity=0.058 Sum_probs=174.8
Q ss_pred CCCCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 74 PRSTRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 74 ~~~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
....++|+||||||+ |+||++++++|+++|++|++++|+... ......... ....+.++.+|++|.++++++++
T Consensus 9 ~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~ 84 (271)
T 3ek2_A 9 MGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAA---EFGSELVFPCDVADDAQIDALFA 84 (271)
T ss_dssp CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHH---HTTCCCEEECCTTCHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHH---HcCCcEEEECCCCCHHHHHHHHH
Confidence 456789999999999 999999999999999999999997432 222222211 12358899999999999999988
Q ss_pred cc-----CccEEEEcccccCch---------hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCC
Q 042406 152 VV-----AFTHVMHLAAQAGVR---------YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKV 216 (424)
Q Consensus 152 ~~-----~~d~vi~~Ag~~~~~---------~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~ 216 (424)
.+ ++|+||||||..... ...++.+..+++|+.++.++++++..... ..+||++||.+.+..
T Consensus 85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~---- 160 (271)
T 3ek2_A 85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERA---- 160 (271)
T ss_dssp HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSB----
T ss_pred HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccC----
Confidence 66 789999999986531 22334467999999999999999876521 238999999877642
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCC
Q 042406 217 PFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 217 ~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++..........+...+....+.
T Consensus 161 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-------- 224 (271)
T 3ek2_A 161 --------IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL-------- 224 (271)
T ss_dssp --------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT--------
T ss_pred --------CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc--------
Confidence 1456889999999999999998775 899999999999987544321122333333332221
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHH
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVS 351 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~ 351 (424)
..+..++|+|++++.++...... ..|+++++.+|..+++.++.+
T Consensus 225 ----~~~~~pedva~~i~~l~s~~~~~----------~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 225 ----KRNVTIEQVGNAGAFLLSDLASG----------VTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp ----SSCCCHHHHHHHHHHHHSGGGTT----------CCSEEEEESTTGGGBCCCC--
T ss_pred ----CCCCCHHHHHHHHHHHcCcccCC----------eeeeEEEECCCeeeehhhhhh
Confidence 23678999999999998765432 445999999998888776654
No 141
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=99.95 E-value=3.6e-26 Score=212.76 Aligned_cols=234 Identities=15% Similarity=0.132 Sum_probs=166.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... .....++.++.+|++|.++++++++.+
T Consensus 10 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 88 (267)
T 1iy8_A 10 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLE-TAPDAEVLTTVADVSDEAQVEAYVTATTE 88 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-hcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999976543332222211 111457899999999999999988765
Q ss_pred ---CccEEEEcccccCc-h----hhccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-R----YAMQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-~----~~~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.... . ...++.+..+++|+.|+.++++ .+++.+.+ +||++||...+...
T Consensus 89 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~-------- 159 (267)
T 1iy8_A 89 RFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSG-MVVNTASVGGIRGI-------- 159 (267)
T ss_dssp HHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCGGGTSBC--------
T ss_pred HcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEEcchhhccCC--------
Confidence 67999999997543 1 1223346789999999876555 44555544 99999998765421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC------CCcHHHHHHHHHcCCceeEEecCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP------DMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
.+...|++||.+.+.+++.++.++ |+++++|+||.|+++.... ..........+....
T Consensus 160 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 226 (267)
T 1iy8_A 160 ----GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN--------- 226 (267)
T ss_dssp ----SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC---------
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccC---------
Confidence 345789999999999999998764 8999999999999863110 000000000111111
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
....+.+++|+|++++.++..+... ..|+++++.+|...+
T Consensus 227 ---p~~r~~~~~dvA~~v~~l~s~~~~~----------~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 227 ---PSKRYGEAPEIAAVVAFLLSDDASY----------VNATVVPIDGGQSAA 266 (267)
T ss_dssp ---TTCSCBCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTTTTB
T ss_pred ---CCCCCcCHHHHHHHHHHHcCccccC----------CCCCEEEECCCcccC
Confidence 1123789999999999988655322 344899999886543
No 142
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=99.95 E-value=2.9e-27 Score=224.51 Aligned_cols=238 Identities=18% Similarity=0.207 Sum_probs=172.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch-hhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY-ETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
+|+|+||||||+||+++++.|+++|++|++++|+.+.. ...... ....+...+++++.+|++|.+++.++++++ |+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~--d~ 80 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQ-LLESFKASGANIVHGSIDDHASLVEAVKNV--DV 80 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHH-HHHHHHTTTCEEECCCTTCHHHHHHHHHTC--SE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHH-HHHHHHhCCCEEEEeccCCHHHHHHHHcCC--CE
Confidence 57899999999999999999999999999999976432 111111 111223468999999999999999999976 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCC-CChHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQP-ASLYAATK 235 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~-~~~Y~~sK 235 (424)
|||+|+... +.++.+++++|++.+ ++ +||+ |+ ||... .+..+. .| ...| .+|
T Consensus 81 vi~~a~~~~---------------~~~~~~l~~aa~~~g~v~-~~v~-S~---~g~~~----~~~~~~-~p~~~~y-~sK 134 (308)
T 1qyc_A 81 VISTVGSLQ---------------IESQVNIIKAIKEVGTVK-RFFP-SE---FGNDV----DNVHAV-EPAKSVF-EVK 134 (308)
T ss_dssp EEECCCGGG---------------SGGGHHHHHHHHHHCCCS-EEEC-SC---CSSCT----TSCCCC-TTHHHHH-HHH
T ss_pred EEECCcchh---------------hhhHHHHHHHHHhcCCCc-eEee-cc---cccCc----cccccC-CcchhHH-HHH
Confidence 999998632 345789999999998 75 8873 43 55321 122222 23 3568 999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhh
Q 042406 236 KAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315 (424)
Q Consensus 236 ~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 315 (424)
.++|.++++ .+++++++||+.++|+....- .. .......++.+.++ ++++..++|+|++|+|++++.++.
T Consensus 135 ~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~---~~~~~~~~~i~~~Dva~~~~~~l~ 204 (308)
T 1qyc_A 135 AKVRRAIEA----EGIPYTYVSSNCFAGYFLRSL--AQ-AGLTAPPRDKVVIL---GDGNARVVFVKEEDIGTFTIKAVD 204 (308)
T ss_dssp HHHHHHHHH----HTCCBEEEECCEEHHHHTTTT--TC-TTCSSCCSSEEEEE---TTSCCEEEEECHHHHHHHHHTTSS
T ss_pred HHHHHHHHh----cCCCeEEEEeceecccccccc--cc-ccccCCCCCceEEe---cCCCceEEEecHHHHHHHHHHHHh
Confidence 999988865 389999999999988532210 00 00001133445554 577889999999999999999987
Q ss_pred hccccCCCCCCCCCCCCcceEEcCC-CCcccHHHHHHHHHHHhCccccccccc
Q 042406 316 TAKKSTGSGGKKKGPAEFRIFNLGN-TTPVPVSRLVSLLEKILKVKAETKVLP 367 (424)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 367 (424)
.+.. .+++|++.+ ++.+|+.|+++.+.+.+|.+.+....|
T Consensus 205 ~~~~------------~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 245 (308)
T 1qyc_A 205 DPRT------------LNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVP 245 (308)
T ss_dssp CGGG------------TTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEEC
T ss_pred Cccc------------cCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCC
Confidence 6542 237888876 478999999999999999887655443
No 143
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.95 E-value=3.9e-26 Score=211.18 Aligned_cols=230 Identities=14% Similarity=0.062 Sum_probs=164.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+. ...... .. . .++.+|++|.++++++++.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~-----~~--~-~~~~~D~~~~~~~~~~~~~~~~ 73 (256)
T 2d1y_A 3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEA-----IG--G-AFFQVDLEDERERVRFVEEAAY 73 (256)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHH-----HT--C-EEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHH-----hh--C-CEEEeeCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999997654 221111 11 4 78999999999999888765
Q ss_pred ---CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||....... .++.+..+++|+.|+.++++++.. .+. ++||++||...+...
T Consensus 74 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~-g~iv~isS~~~~~~~--------- 143 (256)
T 2d1y_A 74 ALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGG-GAIVNVASVQGLFAE--------- 143 (256)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSBC---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC-cEEEEEccccccCCC---------
Confidence 68999999998643221 223467999999999999887643 343 399999998765321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHH-cCCceeEEecCCCCcccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDII-RGKRITVYEAPDGASVAR 298 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 298 (424)
.+...|+.||++.+.+++.++.++ |+++++|+||.+.++.. ..+..... .......+ .......
T Consensus 144 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~------~~~~~~~~~~~~~~~~~---~~~~~~~ 211 (256)
T 2d1y_A 144 ---QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAV------LEAIALSPDPERTRRDW---EDLHALR 211 (256)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH------HHHHC--------CHHH---HTTSTTS
T ss_pred ---CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchh------hhccccccCCHHHHHHH---HhcCCCC
Confidence 345789999999999999998775 89999999999987521 01100000 00000000 0112234
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccH
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPV 346 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~ 346 (424)
.+++++|+|++++.++...... ..|++|++.+|...++
T Consensus 212 ~~~~~~dvA~~~~~l~s~~~~~----------~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 212 RLGKPEEVAEAVLFLASEKASF----------ITGAILPVDGGMTASF 249 (256)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGBC
T ss_pred CCcCHHHHHHHHHHHhCchhcC----------CCCCEEEECCCccccc
Confidence 5899999999999988765322 3348999999876554
No 144
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=99.95 E-value=1.6e-26 Score=217.83 Aligned_cols=234 Identities=16% Similarity=0.053 Sum_probs=169.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|+++||||+|+||++++++|+++|++|++++|+.+..+.. ... . ..++.++.+|++|.++++++++.+
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~----~~~-~-~~~~~~~~~Dl~d~~~v~~~~~~~~ 85 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAA----ART-M-AGQVEVRELDLQDLSSVRRFADGVS 85 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HTT-S-SSEEEEEECCTTCHHHHHHHHHTCC
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHH-h-cCCeeEEEcCCCCHHHHHHHHHhcC
Confidence 457899999999999999999999999999999999965432221 111 1 357899999999999999999977
Q ss_pred CccEEEEcccccCch--hhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCC-CCCCCCCCCCCCCCCCh
Q 042406 154 AFTHVMHLAAQAGVR--YAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVN-KKVPFSEKDRTDQPASL 230 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~--~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~-~~~~~~e~~~~~~~~~~ 230 (424)
++|+||||||+.... ...++.+..+++|+.|+.++++++.....+ +||++||...+... ...+..++..+..+...
T Consensus 86 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (291)
T 3rd5_A 86 GADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-RVVTVSSMAHWPGRINLEDLNWRSRRYSPWLA 164 (291)
T ss_dssp CEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-EEEEECCGGGTTCCCCSSCTTCSSSCCCHHHH
T ss_pred CCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-heeEeechhhccCCCCcccccccccCCCCcch
Confidence 789999999986532 234566789999999999999999988765 99999998877432 22222222223355678
Q ss_pred HHHHHHHHHHHHHHHHHHh---C--CcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHH
Q 042406 231 YAATKKAGEAIAHAYNHIY---G--LSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~---~--i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 305 (424)
|++||++.+.+++.++.++ | +++++|+||.|.++..... ...+...+. ..+ ..+-..+.+|
T Consensus 165 Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~--~~~~~~~~~-~~~-----------~~~~~~~~~~ 230 (291)
T 3rd5_A 165 YSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGAS--GRKLGDALM-SAA-----------TRVVATDADF 230 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC----------------------------------CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCcccccccc--chHHHHHHH-HHH-----------HHHHhCCHHH
Confidence 9999999999999998775 5 9999999999988754321 001111111 000 1112345899
Q ss_pred HHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 306 IVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 306 va~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
+|++++.++..+. ..|+.|++.+|
T Consensus 231 ~A~~~~~l~~~~~------------~~G~~~~vdgG 254 (291)
T 3rd5_A 231 GARQTLYAASQDL------------PGDSFVGPRFG 254 (291)
T ss_dssp HHHHHHHHHHSCC------------CTTCEEEETTS
T ss_pred HHHHHHHHHcCCC------------CCCceeCCccc
Confidence 9999999988742 23478887654
No 145
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=99.95 E-value=8.9e-27 Score=217.10 Aligned_cols=231 Identities=13% Similarity=0.061 Sum_probs=170.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
...+++|++|||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++.+|++|.++++++++.+
T Consensus 23 ~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 23 DKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQ---AGLEGRGAVLNVNDATAVDALVEST 99 (270)
T ss_dssp CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH---HTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999976544333222221 2357889999999999999988865
Q ss_pred -----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||+..... ..++.+..+++|+.|+.++++++.. .+. .+||++||...+..
T Consensus 100 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~-------- 170 (270)
T 3ftp_A 100 LKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARG-GRIVNITSVVGSAG-------- 170 (270)
T ss_dssp HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCHHHHHC--------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-CEEEEECchhhCCC--------
Confidence 6899999999865422 2334467999999999999887743 333 38999999766532
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++.... ........+.... ..
T Consensus 171 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~------------p~ 232 (270)
T 3ftp_A 171 ----NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG--LPQEQQTALKTQI------------PL 232 (270)
T ss_dssp ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH--SCHHHHHHHHTTC------------TT
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh--cCHHHHHHHHhcC------------CC
Confidence 1345789999999999999998874 8999999999998763210 0011222222221 12
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
..+.+++|+|++++.++...... ..|+++++.+|..+
T Consensus 233 ~r~~~pedvA~~v~~L~s~~~~~----------itG~~i~vdGG~~~ 269 (270)
T 3ftp_A 233 GRLGSPEDIAHAVAFLASPQAGY----------ITGTTLHVNGGMFM 269 (270)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTSSC
T ss_pred CCCCCHHHHHHHHHHHhCCCcCC----------ccCcEEEECCCccc
Confidence 34788999999999888654432 44589999988654
No 146
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=99.95 E-value=6.3e-27 Score=219.05 Aligned_cols=236 Identities=10% Similarity=0.034 Sum_probs=173.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+..+++|++|||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++.+
T Consensus 22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~ 99 (277)
T 4fc7_A 22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG--ATGRRCLPLSMDVRAPPAVMAAVDQA 99 (277)
T ss_dssp TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH--HHSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--hcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4457899999999999999999999999999999999976544433332221 12457899999999999999988865
Q ss_pred -----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.. .+. .+||++||...+...
T Consensus 100 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~~------- 171 (277)
T 4fc7_A 100 LKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHG-GVIVNITATLGNRGQ------- 171 (277)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC-EEEEEECCSHHHHTC-------
T ss_pred HHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-CEEEEECchhhCCCC-------
Confidence 789999999975432 12334467999999999999888743 333 389999998765321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC-CcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD-MAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.....|++||++.+.+++.++.++ |+++++|+||.|.++..... ..............++
T Consensus 172 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~----------- 235 (277)
T 4fc7_A 172 -----ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL----------- 235 (277)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT-----------
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC-----------
Confidence 345789999999999999998875 89999999999998731100 0001122223332221
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccH
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPV 346 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~ 346 (424)
..+.+++|+|++++.++...... ..|+++++.+|..+++
T Consensus 236 -~r~~~p~dvA~~v~fL~s~~~~~----------itG~~i~vdGG~~~~~ 274 (277)
T 4fc7_A 236 -QRLGNKTEIAHSVLYLASPLASY----------VTGAVLVADGGAWLTF 274 (277)
T ss_dssp -SSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTHHHHC
T ss_pred -CCCcCHHHHHHHHHHHcCCccCC----------cCCCEEEECCCcccCC
Confidence 23778999999999988765432 4458999998865543
No 147
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=99.95 E-value=3.6e-26 Score=213.79 Aligned_cols=228 Identities=9% Similarity=0.003 Sum_probs=166.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeC-CCCchhhhHHHHHhhhhccCCeEEEEccCCCH----HHHHHHh
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDN-FNNYYETSLKKARKGLLERAGVFVIDADINDK----SLLDKIF 150 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~----~~v~~~~ 150 (424)
.+++|+++||||+|+||++++++|+++|++|++++| +.+........... ....++.++.+|++|. +++++++
T Consensus 8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 85 (276)
T 1mxh_A 8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNA--ARAGSAVLCKGDLSLSSSLLDCCEDII 85 (276)
T ss_dssp ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSSSTTHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHH--hcCCceEEEeccCCCccccHHHHHHHH
Confidence 357899999999999999999999999999999999 54433322222211 1135789999999999 9998888
Q ss_pred hcc-----CccEEEEcccccCchh----hc-----------cChHHHHHHHHHHHHHHHHHHHhcCC--C------CeEE
Q 042406 151 NVV-----AFTHVMHLAAQAGVRY----AM-----------QNPNSYVESNIAGFVNLLETCKSSDP--Q------PAIV 202 (424)
Q Consensus 151 ~~~-----~~d~vi~~Ag~~~~~~----~~-----------~~~~~~~~~N~~g~~~ll~a~~~~~~--~------~~~v 202 (424)
+.+ ++|+||||||...... .. ++.+..+++|+.|+.++++++.+... . ++||
T Consensus 86 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv 165 (276)
T 1mxh_A 86 DCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV 165 (276)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred HHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence 754 6799999999754321 11 33457899999999999999877431 1 4899
Q ss_pred EecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHH
Q 042406 203 WASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDI 279 (424)
Q Consensus 203 ~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~ 279 (424)
++||...+.. ..+...|++||++.+.+++.++.++ |+++++|+||.|++| .. ....+...+
T Consensus 166 ~isS~~~~~~------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~---~~~~~~~~~ 229 (276)
T 1mxh_A 166 NLCDAMTDLP------------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PA---MPQETQEEY 229 (276)
T ss_dssp EECCGGGGSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SS---SCHHHHHHH
T ss_pred EECchhhcCC------------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-cc---CCHHHHHHH
Confidence 9999887642 1345789999999999999998775 899999999999998 21 112233333
Q ss_pred HcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 280 IRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
....+. .+++.+++|+|++++.++...... ..|++|++.+|.
T Consensus 230 ~~~~p~-----------~r~~~~~~dva~~v~~l~s~~~~~----------~tG~~~~vdgG~ 271 (276)
T 1mxh_A 230 RRKVPL-----------GQSEASAAQIADAIAFLVSKDAGY----------ITGTTLKVDGGL 271 (276)
T ss_dssp HTTCTT-----------TSCCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred HhcCCC-----------CCCCCCHHHHHHHHHHHhCccccC----------ccCcEEEECCch
Confidence 322111 123789999999999988754322 344899998874
No 148
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=99.95 E-value=2.1e-26 Score=213.45 Aligned_cols=231 Identities=12% Similarity=0.054 Sum_probs=165.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeC-CCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDN-FNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
++++|+|+||||+|+||++++++|+++|++|++++| +.+........... ...++.++.+|++|.+++.++++.+
T Consensus 4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKK---VGGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999 43322222111111 1346889999999999999888754
Q ss_pred ----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.+ .+..++||++||...+..
T Consensus 81 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~--------- 151 (261)
T 1gee_A 81 KEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP--------- 151 (261)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC---------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC---------
Confidence 679999999986432 12234467899999999888777644 331249999999776532
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..+...|+.||++.+.+++.++.++ |+++++||||.|+++........+.....+....+ ..
T Consensus 152 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------~~ 216 (261)
T 1gee_A 152 ---WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIP------------MG 216 (261)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCT------------TS
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCC------------CC
Confidence 1456789999999999999998775 89999999999999843210000111222222111 12
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.+++++|+|++++.++...... ..|+++++.+|..
T Consensus 217 ~~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gg~~ 251 (261)
T 1gee_A 217 YIGEPEEIAAVAAWLASSEASY----------VTGITLFADGGMT 251 (261)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGG
T ss_pred CCcCHHHHHHHHHHHhCccccC----------CCCcEEEEcCCcc
Confidence 4789999999999988754321 3348999998754
No 149
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=99.95 E-value=9.5e-26 Score=213.03 Aligned_cols=233 Identities=13% Similarity=0.068 Sum_probs=172.8
Q ss_pred CCCCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 75 RSTRGLTVLVTGAAG--FVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 75 ~~~~~~~vlItGg~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
..+++|++|||||+| +||+++++.|+++|++|++++|+.+..+. ...... ....+.++.+|++|.++++++++.
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~-~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKR-VDPLAE---SLGVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHH---HHTCCEEEECCTTCHHHHHHHHHH
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHHH---hcCCeEEEEcCCCCHHHHHHHHHH
Confidence 457899999999997 99999999999999999999997543222 111111 123578999999999999999886
Q ss_pred c-----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~ 218 (424)
+ ++|+||||||+... ....++.+..+++|+.|+.++++++..... ..+||++||.+.+..
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~------ 175 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKV------ 175 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC------
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccC------
Confidence 5 78999999998653 122334467999999999999999876532 248999999877642
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
......|++||++.+.+++.++.++ |+++++|+||.|.++..............+....++
T Consensus 176 ------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~---------- 239 (296)
T 3k31_A 176 ------VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL---------- 239 (296)
T ss_dssp ------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT----------
T ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC----------
Confidence 1445789999999999999998875 899999999999998543221112222333222221
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
..+...+|+|++++.++...... ..|+++++.+|..+.
T Consensus 240 --~r~~~pedvA~~v~fL~s~~a~~----------itG~~i~vdGG~~~~ 277 (296)
T 3k31_A 240 --RRNTTLDDVGGAALYLLSDLGRG----------TTGETVHVDCGYHVV 277 (296)
T ss_dssp --SSCCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGC
T ss_pred --CCCCCHHHHHHHHHHHcCCccCC----------ccCCEEEECCCcccc
Confidence 12677899999999998765432 445899999886543
No 150
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=99.95 E-value=1.5e-26 Score=215.03 Aligned_cols=226 Identities=13% Similarity=0.050 Sum_probs=163.8
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+.++++|++|||||+|+||++++++|+++|++|++++|+.+....... . ...++.++.+|++|.++++++++.+
T Consensus 22 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-----~-~~~~~~~~~~Dv~d~~~v~~~~~~~ 95 (266)
T 3grp_A 22 MFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAA-----D-LGKDVFVFSANLSDRKSIKQLAEVA 95 (266)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-----H-HCSSEEEEECCTTSHHHHHHHHHHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-----H-hCCceEEEEeecCCHHHHHHHHHHH
Confidence 456789999999999999999999999999999999996543322211 1 1357899999999999999988854
Q ss_pred -----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||..... ...++.+..+++|+.|+.++.+++ ++.+.+ +||++||...+...
T Consensus 96 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~Iv~isS~~~~~~~------- 167 (266)
T 3grp_A 96 EREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYG-RIINITSIVGVVGN------- 167 (266)
T ss_dssp HHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCC-------------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-EEEEECCHHHcCCC-------
Confidence 679999999986532 223345678999999976665554 445544 99999997665321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.+...|+.||++.+.+++.++.++ |+++++|+||.|.++.... ........+....+ .
T Consensus 168 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~p------------~ 228 (266)
T 3grp_A 168 -----PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDK--LNEKQKEAIMAMIP------------M 228 (266)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHT--CCHHHHHHHHTTCT------------T
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhc--cCHHHHHHHHhcCC------------C
Confidence 345789999999999999998774 8999999999998863221 11123333333322 2
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 229 ~r~~~~edvA~~v~~L~s~~~~~----------itG~~i~vdGG~ 263 (266)
T 3grp_A 229 KRMGIGEEIAFATVYLASDEAAY----------LTGQTLHINGGM 263 (266)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTC
T ss_pred CCCcCHHHHHHHHHHHhCccccC----------ccCCEEEECCCe
Confidence 23778999999999988765432 345899998874
No 151
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=99.95 E-value=8.1e-27 Score=222.63 Aligned_cols=230 Identities=18% Similarity=0.210 Sum_probs=170.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|+||||+|+||++++++|+++|++|++++|+.+........ +...+++++.+|++|.+++.++++++ |+||
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~-----l~~~~v~~v~~Dl~d~~~l~~a~~~~--d~vi 84 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDE-----FQSLGAIIVKGELDEHEKLVELMKKV--DVVI 84 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHH-----HHHTTCEEEECCTTCHHHHHHHHTTC--SEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHH-----hhcCCCEEEEecCCCHHHHHHHHcCC--CEEE
Confidence 5899999999999999999999999999999976421111111 12357899999999999999999976 9999
Q ss_pred EcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCC-CChHHHHHHH
Q 042406 160 HLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQP-ASLYAATKKA 237 (424)
Q Consensus 160 ~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~-~~~Y~~sK~~ 237 (424)
|+|+... +.++.+++++|++.+ ++ +||+ | +||... ++..+. .| ...| .+|.+
T Consensus 85 ~~a~~~~---------------~~~~~~l~~aa~~~g~v~-~~v~-S---~~g~~~----~~~~~~-~p~~~~y-~sK~~ 138 (318)
T 2r6j_A 85 SALAFPQ---------------ILDQFKILEAIKVAGNIK-RFLP-S---DFGVEE----DRINAL-PPFEALI-ERKRM 138 (318)
T ss_dssp ECCCGGG---------------STTHHHHHHHHHHHCCCC-EEEC-S---CCSSCT----TTCCCC-HHHHHHH-HHHHH
T ss_pred ECCchhh---------------hHHHHHHHHHHHhcCCCC-EEEe-e---ccccCc----ccccCC-CCcchhH-HHHHH
Confidence 9998632 346789999999988 75 8874 4 355321 121211 22 3568 99999
Q ss_pred HHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 238 GEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 238 ~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
+|.++++ .+++++++||+.+++. +.+.+......+..+.++ ++++..++++|++|+|++++.++..+
T Consensus 139 ~e~~~~~----~~~~~~~lr~~~~~~~------~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~Dva~~~~~~l~~~ 205 (318)
T 2r6j_A 139 IRRAIEE----ANIPYTYVSANCFASY------FINYLLRPYDPKDEITVY---GTGEAKFAMNYEQDIGLYTIKVATDP 205 (318)
T ss_dssp HHHHHHH----TTCCBEEEECCEEHHH------HHHHHHCTTCCCSEEEEE---TTSCCEEEEECHHHHHHHHHHHTTCG
T ss_pred HHHHHHh----cCCCeEEEEcceehhh------hhhhhccccCCCCceEEe---cCCCceeeEeeHHHHHHHHHHHhcCc
Confidence 9988764 4899999999988764 122222222234445554 56788999999999999999999875
Q ss_pred cccCCCCCCCCCCCCcceEEcCC-CCcccHHHHHHHHHHHhCccccccccc
Q 042406 318 KKSTGSGGKKKGPAEFRIFNLGN-TTPVPVSRLVSLLEKILKVKAETKVLP 367 (424)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~el~~~i~~~~g~~~~~~~~~ 367 (424)
.. .+++|++.+ ++.+|+.|+++.+.+.+|.+.++...+
T Consensus 206 ~~------------~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~ 244 (318)
T 2r6j_A 206 RA------------LNRVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVP 244 (318)
T ss_dssp GG------------TTEEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEEC
T ss_pred cc------------cCeEEEecCCCCccCHHHHHHHHHHHhCCCCceeecC
Confidence 42 127788875 578999999999999999887655443
No 152
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=99.95 E-value=1.5e-26 Score=215.84 Aligned_cols=231 Identities=15% Similarity=0.065 Sum_probs=167.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|... ......... ....++.++.+|++|.++++++.+..
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 102 (273)
T 3uf0_A 27 FSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIA---DGGGSAEAVVADLADLEGAANVAEELA 102 (273)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHH---TTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHH---hcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999997532 222211111 12357899999999999998875533
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+..
T Consensus 103 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~IV~isS~~~~~~---------- 171 (273)
T 3uf0_A 103 ATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSG-RIVTIASMLSFQG---------- 171 (273)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSC----------
T ss_pred hcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEEcchHhcCC----------
Confidence 6799999999865422 22334679999999999988876 344544 8999999877642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||.|+++..............+....+ ...
T Consensus 172 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------------~~r 237 (273)
T 3uf0_A 172 --GRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIP------------AGR 237 (273)
T ss_dssp --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHST------------TSS
T ss_pred --CCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCC------------CCC
Confidence 144578999999999999999987 489999999999998743210000112222222221 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
+.+++|+|++++.++...... ..|+++++.+|...
T Consensus 238 ~~~pedva~~v~~L~s~~a~~----------itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 238 WATPEDMVGPAVFLASDAASY----------VHGQVLAVDGGWLA 272 (273)
T ss_dssp CBCGGGGHHHHHHHHSGGGTT----------CCSCEEEESTTGGG
T ss_pred CCCHHHHHHHHHHHhCchhcC----------CcCCEEEECcCccC
Confidence 778999999999988765432 44589999988644
No 153
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=99.94 E-value=4.1e-26 Score=210.78 Aligned_cols=224 Identities=14% Similarity=0.071 Sum_probs=162.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||++++++|+++|++|++++|+.+..... ..+ . ..++.++.+|++|.++++++++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~----~~~-~-~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT----ARE-L-GDAARYQHLDVTIEEDWQRVVAYAREE 76 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHT-T-GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHH-h-CCceeEEEecCCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999965332221 111 1 246889999999999999888754
Q ss_pred --CccEEEEcccccCch----hhccChHHHHHHHHHHHHH----HHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVN----LLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~----ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||..... ...++.+..+++|+.|+.+ +++.+++.+.+ +||++||...+...
T Consensus 77 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~---------- 145 (254)
T 1hdc_A 77 FGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGG-SIVNISSAAGLMGL---------- 145 (254)
T ss_dssp HSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEECchhhccCC----------
Confidence 679999999976432 1223446789999999874 45556665544 99999998776421
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.+...|++||.+.+.+++.++.++ |+++++||||.|+++. .... .......+ ........+
T Consensus 146 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~----------~~~~-~~~~~~~~---~~~~p~~~~ 209 (254)
T 1hdc_A 146 --ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM----------TAET-GIRQGEGN---YPNTPMGRV 209 (254)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH----------HHHH-TCCCSTTS---CTTSTTSSC
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCcc----------cccc-chhHHHHH---HhcCCCCCC
Confidence 345789999999999999998774 8999999999999872 1111 11000000 011111236
Q ss_pred c-cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 301 T-YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 301 i-~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
. +++|+|++++.++...... ..|+++++.+|..
T Consensus 210 ~~~~~dvA~~v~~l~s~~~~~----------~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 210 GNEPGEIAGAVVKLLSDTSSY----------VTGAELAVDGGWT 243 (254)
T ss_dssp B-CHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTTT
T ss_pred CCCHHHHHHHHHHHhCchhcC----------CCCCEEEECCCcc
Confidence 7 9999999999988765322 3448999988753
No 154
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=99.94 E-value=4.8e-26 Score=209.54 Aligned_cols=225 Identities=11% Similarity=0.052 Sum_probs=168.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|+++||||+|+||++++++|+++|++|++++|+.+..+...... ...+.++.+|++|.++++++++.+
T Consensus 5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~ 78 (248)
T 3op4_A 5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYL------GDNGKGMALNVTNPESIEAVLKAIT 78 (248)
T ss_dssp TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cccceEEEEeCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999999754433222211 235788999999999999998865
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||+..... ..++.+..+++|+.|+.++++++.. .+.+ +||++||...+..
T Consensus 79 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g-~iv~isS~~~~~~--------- 148 (248)
T 3op4_A 79 DEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQG-RIINVGSVVGTMG--------- 148 (248)
T ss_dssp HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHHHHHC---------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEEcchhhcCC---------
Confidence 6899999999865422 2334467999999999998887643 4443 8999999766532
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++..... ............+ ..
T Consensus 149 ---~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p------------~~ 211 (248)
T 3op4_A 149 ---NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQVP------------AG 211 (248)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS--CHHHHHHHHHTCT------------TC
T ss_pred ---CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc--CHHHHHHHHhcCC------------CC
Confidence 1456789999999999999998774 89999999999998754321 1122222222221 12
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 212 r~~~p~dva~~v~~L~s~~~~~----------itG~~i~vdgG~ 245 (248)
T 3op4_A 212 RLGDPREIASAVAFLASPEAAY----------ITGETLHVNGGM 245 (248)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTS
T ss_pred CCcCHHHHHHHHHHHcCCccCC----------ccCcEEEECCCe
Confidence 3788999999999888765432 345899998875
No 155
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=99.94 E-value=5e-26 Score=211.92 Aligned_cols=222 Identities=11% Similarity=0.018 Sum_probs=166.0
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
....++|+||||||+|+||++++++|+++|++|++++|+.+.. ...+.++++|++|.++++++++.+
T Consensus 9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~~Dv~~~~~v~~~~~~~ 75 (269)
T 3vtz_A 9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD-------------VNVSDHFKIDVTNEEEVKEAVEKT 75 (269)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C-------------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc-------------cCceeEEEecCCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999999999965421 125678999999999999988865
Q ss_pred -----CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||....... .++.+..+++|+.|+.++++++.. .+.+ +||++||...+...
T Consensus 76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~~------- 147 (269)
T 3vtz_A 76 TKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHG-SIINIASVQSYAAT------- 147 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSBC-------
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCC-EEEEECchhhccCC-------
Confidence 78999999998654322 223356899999999888887643 4443 99999998887531
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCC---------CCcHHHHHHHHHcCCceeEEe
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRP---------DMAYFFFTRDIIRGKRITVYE 289 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 289 (424)
.+...|++||++.+.+++.++.++ ++++++|+||.|.++.... ..........+....
T Consensus 148 -----~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 216 (269)
T 3vtz_A 148 -----KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH------ 216 (269)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS------
T ss_pred -----CCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcC------
Confidence 345789999999999999999887 8999999999999863110 000111122222111
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
....+.+++|+|++++.++...... ..|+++++.+|..
T Consensus 217 ------p~~r~~~pedvA~~v~~L~s~~~~~----------itG~~i~vdGG~~ 254 (269)
T 3vtz_A 217 ------PMGRIGRPEEVAEVVAFLASDRSSF----------ITGACLTVDGGLL 254 (269)
T ss_dssp ------TTSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGG
T ss_pred ------CCCCCcCHHHHHHHHHHHhCCccCC----------CcCcEEEECCCcc
Confidence 1234788999999999988765432 4458999998753
No 156
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=99.94 E-value=3.5e-27 Score=219.94 Aligned_cols=233 Identities=12% Similarity=0.048 Sum_probs=171.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRN---VGHDAEAVAFDVTSESEIIEAFARLD 98 (271)
T ss_dssp GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH---TTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999976544443333221 2357899999999999999998865
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||+..... ..++.+..+++|+.|+.++++++.. .+.+ +||++||...+..
T Consensus 99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iV~isS~~~~~~--------- 168 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYG-KIVNIGSLTSELA--------- 168 (271)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSB---------
T ss_pred HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEccHHhCCC---------
Confidence 6899999999864322 2334467899999999988776543 3443 8999999766532
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++........+.+...+....+. .
T Consensus 169 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------------~ 233 (271)
T 4ibo_A 169 ---RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA------------K 233 (271)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT------------C
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC------------C
Confidence 1456789999999999999998774 899999999999987432100001122222222221 2
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
.+.+++|+|.+++.++...... ..|+++++.+|...+
T Consensus 234 r~~~pedva~~v~~L~s~~~~~----------itG~~i~vdGG~~~~ 270 (271)
T 4ibo_A 234 RWGKPQELVGTAVFLSASASDY----------VNGQIIYVDGGMLSV 270 (271)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTT----------CCSCEEEESTTGGGB
T ss_pred CCcCHHHHHHHHHHHhCccccC----------CCCcEEEECCCeecc
Confidence 3677899999999888765432 445899999886543
No 157
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=99.94 E-value=2.2e-26 Score=211.62 Aligned_cols=228 Identities=11% Similarity=0.048 Sum_probs=164.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++.+
T Consensus 4 ~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 4 KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIAN--KYGVKAHGVEMNLLSEESINKAFEEIYN 81 (248)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHh--hcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999965433222211111 02357899999999999999998754
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~~~~~--------- 151 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWG-RIVNISSVVGFTGN--------- 151 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCE-EEEEECCHHHHHCC---------
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc-EEEEEccHHhcCCC---------
Confidence 679999999976432 122334678999999997766654 445544 99999997554211
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|+.+|.+.+.+++.++.++ +++++++|||.++++.... ....+...+....+ ...
T Consensus 152 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~------------~~~ 214 (248)
T 2pnf_A 152 ---VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV--LSEEIKQKYKEQIP------------LGR 214 (248)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG--SCHHHHHHHHHTCT------------TSS
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh--ccHHHHHHHHhcCC------------CCC
Confidence 345789999999999999998764 8999999999999885431 11122222222211 124
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+++++|+|++++.++...... ..|++|++.+|.
T Consensus 215 ~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gg~ 247 (248)
T 2pnf_A 215 FGSPEEVANVVLFLCSELASY----------ITGEVIHVNGGM 247 (248)
T ss_dssp CBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTC
T ss_pred ccCHHHHHHHHHHHhCchhhc----------CCCcEEEeCCCc
Confidence 889999999999998764321 234899998763
No 158
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=99.94 E-value=4.3e-26 Score=211.76 Aligned_cols=228 Identities=15% Similarity=0.086 Sum_probs=164.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|++|||||+|+||++++++|+++|++|++++|+.+.... .... . ..++.++.+|++|.++++++++.+
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----~~~~-~-~~~~~~~~~D~~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQA----VVAG-L-ENGGFAVEVDVTKRASVDAAMQKAID 82 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHT-C-TTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHH-H-hcCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999996532221 1111 1 126889999999999999988854
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.+ .+...+||++||...+...
T Consensus 83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 153 (263)
T 3ak4_A 83 ALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA--------- 153 (263)
T ss_dssp HHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC---------
T ss_pred HcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC---------
Confidence 6799999999764321 2233467899999999988887654 3312499999998775421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC---------cHHHHHHHHHcCCceeEEec
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM---------AYFFFTRDIIRGKRITVYEA 290 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 290 (424)
.+...|+.||++.+.+++.++.++ |+++++||||.|+++...... ........+...
T Consensus 154 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 222 (263)
T 3ak4_A 154 ---PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSL-------- 222 (263)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHT--------
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhc--------
Confidence 345789999999999999998775 899999999999987321000 000111111111
Q ss_pred CCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 291 PDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 291 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.....+++++|+|++++.++...... ..|++|++.+|..
T Consensus 223 ----~p~~~~~~~~dvA~~v~~l~s~~~~~----------~tG~~~~vdgG~~ 261 (263)
T 3ak4_A 223 ----TPLGRIEEPEDVADVVVFLASDAARF----------MTGQGINVTGGVR 261 (263)
T ss_dssp ----CTTCSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESSSSS
T ss_pred ----CCCCCCcCHHHHHHHHHHHhCccccC----------CCCCEEEECcCEe
Confidence 11234889999999999988765322 3448999998754
No 159
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.94 E-value=3.5e-26 Score=212.75 Aligned_cols=234 Identities=15% Similarity=0.079 Sum_probs=165.6
Q ss_pred CCCCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 72 TRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 72 ~~~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
.+...+++|++|||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++
T Consensus 14 ~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~v~~~~~ 91 (267)
T 1vl8_A 14 KEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTE--KYGVETMAFRCDVSNYEEVKKLLE 91 (267)
T ss_dssp ---CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHHH
T ss_pred CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--hcCCeEEEEEcCCCCHHHHHHHHH
Confidence 334567899999999999999999999999999999999975443332222111 113568899999999999998887
Q ss_pred cc-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCc-ccCCCCCCC
Q 042406 152 VV-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSS-VYGVNKKVP 217 (424)
Q Consensus 152 ~~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~-vyg~~~~~~ 217 (424)
.+ ++|+||||||...... ..++.+..+++|+.|+.++++++. +.+. ++||++||.. .+.
T Consensus 92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~-g~iv~isS~~~~~~------ 164 (267)
T 1vl8_A 92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDN-PSIINIGSLTVEEV------ 164 (267)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSS-CEEEEECCGGGTCC------
T ss_pred HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-cEEEEECCcchhcc------
Confidence 54 6799999999864321 122345789999999998887763 3444 4999999976 321
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
...+...|++||++.+.+++.++.++ |+++++|+||.|.++..............+....+
T Consensus 165 ------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p---------- 228 (267)
T 1vl8_A 165 ------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIP---------- 228 (267)
T ss_dssp ------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCT----------
T ss_pred ------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCC----------
Confidence 11345789999999999999998774 89999999999988742210000111222222211
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+.+.+|+|++++.++...... ..|+++.+.+|.
T Consensus 229 --~~~~~~p~dvA~~v~~l~s~~~~~----------itG~~i~vdGG~ 264 (267)
T 1vl8_A 229 --LGRTGVPEDLKGVAVFLASEEAKY----------VTGQIIFVDGGW 264 (267)
T ss_dssp --TSSCBCGGGGHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred --CCCCcCHHHHHHHHHHHcCccccC----------CcCCeEEECCCC
Confidence 113778999999999988764322 344899998774
No 160
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=99.94 E-value=6.1e-26 Score=205.50 Aligned_cols=221 Identities=14% Similarity=0.140 Sum_probs=166.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-Cc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-AF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~~ 155 (424)
.+||+++||||+++||+++++.|+++|++|++.+|+.+.... ....++..+++|++|+++++++++.. ++
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~---------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~i 79 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA---------PRHPRIRREELDITDSQRLQRLFEALPRL 79 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS---------CCCTTEEEEECCTTCHHHHHHHHHHCSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh---------hhcCCeEEEEecCCCHHHHHHHHHhcCCC
Confidence 489999999999999999999999999999999997654322 23457899999999999999999887 78
Q ss_pred cEEEEcccccCch--hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCC
Q 042406 156 THVMHLAAQAGVR--YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPAS 229 (424)
Q Consensus 156 d~vi~~Ag~~~~~--~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~ 229 (424)
|++|||||+.... ...++.+..+++|+.|+..+.+++. +.+ .+||++||...... .....
T Consensus 80 DiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~------------~~~~~ 145 (242)
T 4b79_A 80 DVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRG--GSILNIASMYSTFG------------SADRP 145 (242)
T ss_dssp SEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEEECCGGGTSC------------CSSCH
T ss_pred CEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeeccccCC------------CCCCH
Confidence 9999999986532 1233446799999999887776653 333 38999999765432 13457
Q ss_pred hHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHH
Q 042406 230 LYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDI 306 (424)
Q Consensus 230 ~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv 306 (424)
.|++||.+...+.+.++.++ ||++++|.||.|..|.......-....+.+....|+.. +...+|+
T Consensus 146 ~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR------------~g~peei 213 (242)
T 4b79_A 146 AYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR------------WGEAPEV 213 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS------------CBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC------------CcCHHHH
Confidence 89999999999999999875 89999999999988743321111234444555444322 5568999
Q ss_pred HHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 307 VKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 307 a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
|.+++.++...... ..|+++.|.+|-
T Consensus 214 A~~v~fLaSd~a~~----------iTG~~l~VDGG~ 239 (242)
T 4b79_A 214 ASAAAFLCGPGASF----------VTGAVLAVDGGY 239 (242)
T ss_dssp HHHHHHHTSGGGTT----------CCSCEEEESTTG
T ss_pred HHHHHHHhCchhcC----------ccCceEEECccH
Confidence 99999888665433 455899998763
No 161
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=99.94 E-value=2.4e-26 Score=212.52 Aligned_cols=229 Identities=13% Similarity=0.113 Sum_probs=168.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCC-CCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNF-NNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+ .+........... ...++.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (258)
T 3afn_B 4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA---DGGDAAFFAADLATSEACQQLVDEFV 80 (258)
T ss_dssp GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999998 5443332222221 1346899999999999999988854
Q ss_pred ----CccEEEEcccc-cCch----hhccChHHHHHHHHHHHHHHHHHHHh----cC----CCCeEEEecCCcccCCCCCC
Q 042406 154 ----AFTHVMHLAAQ-AGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SD----PQPAIVWASSSSVYGVNKKV 216 (424)
Q Consensus 154 ----~~d~vi~~Ag~-~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~----~~~~~v~~SS~~vyg~~~~~ 216 (424)
++|+||||||. .... ...++.+..+++|+.|+.++++++.+ .+ ...+||++||...+..
T Consensus 81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~---- 156 (258)
T 3afn_B 81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTG---- 156 (258)
T ss_dssp HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHC----
T ss_pred HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccC----
Confidence 67999999997 3221 11223456899999999988886643 11 1148999999876541
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCC
Q 042406 217 PFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 217 ~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
...+...|+.||++.|.+++.++.++ |+++++||||.++++..... ...+...+..+.+
T Consensus 157 -------~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~--------- 218 (258)
T 3afn_B 157 -------GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIP--------- 218 (258)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTTCT---------
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHHHHHHHhccCC---------
Confidence 01346789999999999999998775 89999999999999854321 2233344443322
Q ss_pred CccccccccHHHHHHHHHHHhhhccc-cCCCCCCCCCCCCcceEEcCCCC
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKK-STGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+++++|+|++++.++..... . ..|++|++.+|.
T Consensus 219 ---~~~~~~~~dva~~~~~l~~~~~~~~----------~~G~~~~v~gg~ 255 (258)
T 3afn_B 219 ---MGRFGTAEEMAPAFLFFASHLASGY----------ITGQVLDINGGQ 255 (258)
T ss_dssp ---TCSCBCGGGTHHHHHHHHCHHHHTT----------CCSEEEEESTTS
T ss_pred ---CCcCCCHHHHHHHHHHHhCcchhcc----------ccCCEEeECCCc
Confidence 23588999999999999876532 1 234899998875
No 162
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=99.94 E-value=5.2e-26 Score=212.86 Aligned_cols=241 Identities=15% Similarity=0.124 Sum_probs=168.6
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc---------hhhhHHHHHh-hhhccCCeEEEEccCCCHH
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY---------YETSLKKARK-GLLERAGVFVIDADINDKS 144 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~~-~~~~~~~v~~~~~Dl~d~~ 144 (424)
.++++|++|||||+|+||++++++|+++|++|++++|+.+. .......... .......+.++.+|++|.+
T Consensus 7 ~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 86 (277)
T 3tsc_A 7 GKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFD 86 (277)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred cccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 45789999999999999999999999999999999984221 1111111111 1113467899999999999
Q ss_pred HHHHHhhcc-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccC
Q 042406 145 LLDKIFNVV-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 145 ~v~~~~~~~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg 211 (424)
+++++++.+ ++|+||||||...... ..++.+..+++|+.|+.++++++. +.+...+||++||...+.
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~ 166 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK 166 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC
Confidence 999988864 6899999999865422 233446789999999998888753 333234899999987764
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCce-eE
Q 042406 212 VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRI-TV 287 (424)
Q Consensus 212 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~ 287 (424)
.. .....|++||++.+.+++.++.++ |+++++|+||.|.++...... .............. ..
T Consensus 167 ~~------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~ 233 (277)
T 3tsc_A 167 MQ------------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDM-VTAVGQAMETNPQLSHV 233 (277)
T ss_dssp CC------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHH-HHHHHHHHHTCGGGTTT
T ss_pred CC------------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchh-hhhhhhcccccHHHHHH
Confidence 21 345789999999999999999875 899999999999987433110 00111111111110 00
Q ss_pred EecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 288 YEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 288 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+ ...... -+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 234 ~---~~~~p~-r~~~pedvA~~v~~L~s~~~~~----------itG~~i~vdGG~ 274 (277)
T 3tsc_A 234 L---TPFLPD-WVAEPEDIADTVCWLASDESRK----------VTAAQIPVDQGS 274 (277)
T ss_dssp T---CCSSSC-SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred h---hhccCC-CCCCHHHHHHHHHHHhCccccC----------CcCCEEeeCCCc
Confidence 0 011111 3889999999999998765432 445899998875
No 163
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=99.94 E-value=1.4e-25 Score=211.48 Aligned_cols=233 Identities=11% Similarity=0.049 Sum_probs=168.7
Q ss_pred CCCCCCCeEEEEcCCCh--hHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 74 PRSTRGLTVLVTGAAGF--VGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
+..+++|++|||||+|+ ||+++++.|+++|++|++++|+... .+....... ...++.++.+|++|.++++++++
T Consensus 26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~-~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~ 101 (293)
T 3grk_A 26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDAL-KKRVEPLAE---ELGAFVAGHCDVADAASIDAVFE 101 (293)
T ss_dssp -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHH-HHHHHHHHH---HHTCEEEEECCTTCHHHHHHHHH
T ss_pred cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHH-HHHHHHHHH---hcCCceEEECCCCCHHHHHHHHH
Confidence 44678999999999977 9999999999999999999996321 111111111 12468899999999999999988
Q ss_pred cc-----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCC
Q 042406 152 VV-----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVP 217 (424)
Q Consensus 152 ~~-----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~ 217 (424)
.+ ++|+||||||+... ....++.+..+++|+.++.++++++..... ..+||++||...+...
T Consensus 102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~---- 177 (293)
T 3grk_A 102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM---- 177 (293)
T ss_dssp HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC----
T ss_pred HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC----
Confidence 65 68999999998652 112334467999999999999998876432 2489999998776421
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
.....|++||++.+.+++.++.++ |+++++|+||.|.++..............+....+.
T Consensus 178 --------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~--------- 240 (293)
T 3grk_A 178 --------PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL--------- 240 (293)
T ss_dssp --------TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT---------
T ss_pred --------CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC---------
Confidence 345889999999999999998775 899999999999987543221122233333332221
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
..+...+|+|++++.++...... ..|+++++.+|..+
T Consensus 241 ---~r~~~pedvA~~v~~L~s~~~~~----------itG~~i~vdGG~~~ 277 (293)
T 3grk_A 241 ---RRTVTIDEVGDVGLYFLSDLSRS----------VTGEVHHADSGYHV 277 (293)
T ss_dssp ---SSCCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGG
T ss_pred ---CCCCCHHHHHHHHHHHcCccccC----------CcceEEEECCCccc
Confidence 22677999999999988765432 44589999987643
No 164
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=99.94 E-value=3.4e-26 Score=214.64 Aligned_cols=237 Identities=16% Similarity=0.068 Sum_probs=168.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+.+++|++|||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++.+|++|.++++++++.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~ 100 (283)
T 3v8b_A 24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG---AGGQAIALEADVSDELQMRNAVRDLV 100 (283)
T ss_dssp ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT---TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999976544333222211 2357899999999999999998865
Q ss_pred ----CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||+... ....++.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 101 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~Iv~isS~~~~~~~------- 172 (283)
T 3v8b_A 101 LKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGG-AIVVVSSINGTRTF------- 172 (283)
T ss_dssp HHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCSBTTTBC-------
T ss_pred HHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-eEEEEcChhhccCC-------
Confidence 78999999998543 1122334678999999999988887 445544 99999997765321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
...+...|++||++.+.+++.++.++ |+++++|+||.|.++.......... .....+.... ......
T Consensus 173 ---~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~----~~~~~~~~~~---~~~~p~ 242 (283)
T 3v8b_A 173 ---TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHE----EETAIPVEWP---KGQVPI 242 (283)
T ss_dssp ---CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCH----HHHSCCCBCT---TCSCGG
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccc----hhhhhhhhhh---hhcCcc
Confidence 11346789999999999999999874 7999999999999885432111000 0001111100 011111
Q ss_pred --cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 --RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 --~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+...+|+|++++.++...... ..|+++++.+|.
T Consensus 243 ~~~r~~~pedvA~~v~fL~s~~a~~----------itG~~i~vdGG~ 279 (283)
T 3v8b_A 243 TDGQPGRSEDVAELIRFLVSERARH----------VTGSPVWIDGGQ 279 (283)
T ss_dssp GTTCCBCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTH
T ss_pred ccCCCCCHHHHHHHHHHHcCccccC----------CcCCEEEECcCc
Confidence 34678999999999988765432 445899998874
No 165
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.94 E-value=8.2e-27 Score=220.38 Aligned_cols=247 Identities=13% Similarity=0.060 Sum_probs=173.6
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+++++|+++||||+|+||+++++.|+++|++|++++|+.+.................++.++.+|++|.++++++++.+
T Consensus 22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 3478899999999999999999999999999999999765443332222111000116899999999999999988754
Q ss_pred ----CccEEEEcccccCchh------hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY------AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~------~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.. .+ ++||++||...+...
T Consensus 102 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~~~~------ 173 (297)
T 1xhl_A 102 AKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQA------ 173 (297)
T ss_dssp HHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSSSC------
T ss_pred HhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhccCC------
Confidence 6799999999754321 2233467999999999988887654 33 499999998776431
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCC-cH------HHHHHHHHcCCceeEEe
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDM-AY------FFFTRDIIRGKRITVYE 289 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~-~~------~~~~~~~~~~~~~~~~~ 289 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||.|.++...... .. ..+...+.. .
T Consensus 174 -----~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--~----- 241 (297)
T 1xhl_A 174 -----HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKE--C----- 241 (297)
T ss_dssp -----CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTT--T-----
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHh--c-----
Confidence 023578999999999999999865 4899999999999987321100 00 001111100 0
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhc-cccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHH
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTA-KKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKI 356 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~ 356 (424)
.....+.+++|+|++++.++... ... ..|+++++.+|..+.+.+....+.+.
T Consensus 242 -----~p~~r~~~pedvA~~v~~l~s~~~~~~----------itG~~i~vdGG~~~~~~~~~~~~~~~ 294 (297)
T 1xhl_A 242 -----IPVGHCGKPEEIANIIVFLADRNLSSY----------IIGQSIVADGGSTLVMGMQTHDLMSV 294 (297)
T ss_dssp -----CTTSSCBCHHHHHHHHHHHHCHHHHTT----------CCSCEEEESTTGGGCCGGGGSCHHHH
T ss_pred -----CCCCCCcCHHHHHHHHHHHhCCcccCC----------ccCcEEEECCCccccccccccchhhh
Confidence 11224789999999999988764 321 34489999998777666655444443
No 166
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=99.94 E-value=1e-25 Score=210.78 Aligned_cols=230 Identities=13% Similarity=0.088 Sum_probs=169.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|+.+........ ...++.++++|++|.++++++++.+
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~Dv~d~~~v~~~~~~~~ 96 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE------IGSKAFGVRVDVSSAKDAESMVEKTT 96 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH------HCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------hCCceEEEEecCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999965433222211 2357899999999999999988865
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+. .+||++||...+..
T Consensus 97 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--------- 166 (277)
T 4dqx_A 97 AKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGG-GSIINTTSYTATSA--------- 166 (277)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTC-EEEEEECCGGGTSC---------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-cEEEEECchhhCcC---------
Confidence 6899999999864422 223345789999999988887764 3333 39999999877642
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC----CCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP----DMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++.... ..........+...
T Consensus 167 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~------------ 231 (277)
T 4dqx_A 167 ---IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNAR------------ 231 (277)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTT------------
T ss_pred ---CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhc------------
Confidence 1445789999999999999998775 8999999999998762100 00011111112221
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
.....+.+++|+|++++.++...... ..|+++++.+|..++
T Consensus 232 ~~~~r~~~pedvA~~v~~L~s~~~~~----------itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 232 AVMDRMGTAEEIAEAMLFLASDRSRF----------ATGSILTVDGGSSIG 272 (277)
T ss_dssp STTCSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESSSSSSC
T ss_pred CcccCCcCHHHHHHHHHHHhCCccCC----------CcCCEEEECCchhhh
Confidence 12234778999999999988765432 345899999887554
No 167
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=99.94 E-value=2.7e-25 Score=208.92 Aligned_cols=243 Identities=12% Similarity=0.050 Sum_probs=169.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch------------hhhHHHHHhh-hhccCCeEEEEccCC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY------------ETSLKKARKG-LLERAGVFVIDADIN 141 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~~~~~~~~-~~~~~~v~~~~~Dl~ 141 (424)
..+++|+++||||+|+||+++++.|+++|++|++++|+.... .+........ .....++.++.+|++
T Consensus 7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~ 86 (286)
T 3uve_A 7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR 86 (286)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence 457899999999999999999999999999999999973211 1111111111 112457899999999
Q ss_pred CHHHHHHHhhcc-----CccEEEEcccccCchh-----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCC
Q 042406 142 DKSLLDKIFNVV-----AFTHVMHLAAQAGVRY-----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSS 207 (424)
Q Consensus 142 d~~~v~~~~~~~-----~~d~vi~~Ag~~~~~~-----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~ 207 (424)
|.++++++++.+ ++|+||||||+..... ..++.+..+++|+.|+.++++++... +...+||++||.
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~ 166 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSV 166 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECch
Confidence 999999988754 6899999999854321 23344679999999999988876542 322489999998
Q ss_pred cccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCc
Q 042406 208 SVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKR 284 (424)
Q Consensus 208 ~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~ 284 (424)
..+.. ......|++||++.+.+++.++.++ |+++++|+||.|.++...... ..........
T Consensus 167 ~~~~~------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~ 230 (286)
T 3uve_A 167 GGLKA------------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEG----TFKMFRPDLE 230 (286)
T ss_dssp GGTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHH----HHHHHCTTSS
T ss_pred hhccC------------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccc----hhhhcccccc
Confidence 77642 1345789999999999999998874 899999999999988543210 0000000000
Q ss_pred eeEE------ecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 285 ITVY------EAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 285 ~~~~------~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
.... ........ ..+.+.+|+|++++.++...... ..|+++++.+|..+
T Consensus 231 ~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~----------itG~~i~vdGG~~l 285 (286)
T 3uve_A 231 NPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARY----------ITGVTLPIDAGSCL 285 (286)
T ss_dssp SCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGG
T ss_pred ccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccC----------CcCCEEeECCcccc
Confidence 0000 00000111 35789999999999988765432 45589999987643
No 168
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=99.94 E-value=7.2e-26 Score=207.28 Aligned_cols=230 Identities=12% Similarity=0.051 Sum_probs=168.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+++||+++||||+++||+++++.|+++|++|++.+|+.+..++...+.+. ...++.++++|++|+++++++++.+
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~---~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG---MGKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999999987655554443332 2467899999999999999988766
Q ss_pred ---CccEEEEcccccCc-h----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-R----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|++|||||+... . ...++.+..+++|+.|+.++.+++ ++.+.+ +||++||...+...
T Consensus 81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G-~IVnisS~~g~~~~-------- 151 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKG-VIVNTASIAGIRGG-------- 151 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTCSS--------
T ss_pred HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEEechhhcCCC--------
Confidence 78999999997542 1 223345679999999987776654 444544 99999997664321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCc-HHHHHHHHHcCCceeEEecCCCCccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMA-YFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.....|++||.+...+.+.++.++ ||++++|.||.|-.|....... .....+......+ ++ +
T Consensus 152 ----~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~------~--- 217 (254)
T 4fn4_A 152 ----FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMS-LS------S--- 217 (254)
T ss_dssp ----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHT-TC------C---
T ss_pred ----CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCC-CC------C---
Confidence 345789999999999999999875 8999999999998774322111 1111111111110 00 0
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
-+...+|+|.+++.++...... ..|+++.|.+|-
T Consensus 218 -R~g~pediA~~v~fLaSd~a~~----------iTG~~i~VDGG~ 251 (254)
T 4fn4_A 218 -RLAEPEDIANVIVFLASDEASF----------VNGDAVVVDGGL 251 (254)
T ss_dssp -CCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred -CCcCHHHHHHHHHHHhCchhcC----------CcCCEEEeCCCc
Confidence 1456899999999888765533 455899998764
No 169
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=99.94 E-value=1.2e-26 Score=221.79 Aligned_cols=245 Identities=12% Similarity=0.083 Sum_probs=178.9
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCC----------CCchhhhHHHHHhhhhccCCeEEEEccCCCH
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNF----------NNYYETSLKKARKGLLERAGVFVIDADINDK 143 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~ 143 (424)
+..+++|++|||||+|+||+++++.|+++|++|++++|+ .+........... ...++.++.+|++|.
T Consensus 22 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~d~ 98 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA---AGGEAVADGSNVADW 98 (322)
T ss_dssp CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHH---TTCEEEEECCCTTSH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHh---cCCcEEEEECCCCCH
Confidence 456789999999999999999999999999999999987 2222222222211 235688999999999
Q ss_pred HHHHHHhhcc-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCC---------CCeEEEec
Q 042406 144 SLLDKIFNVV-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDP---------QPAIVWAS 205 (424)
Q Consensus 144 ~~v~~~~~~~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~---------~~~~v~~S 205 (424)
++++++++.+ ++|+||||||...... ..++.+..+++|+.|+.++++++..... ..+||++|
T Consensus 99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~is 178 (322)
T 3qlj_A 99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTS 178 (322)
T ss_dssp HHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEc
Confidence 9999988865 6899999999865321 2334467999999999999887743211 13899999
Q ss_pred CCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcC
Q 042406 206 SSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRG 282 (424)
Q Consensus 206 S~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~ 282 (424)
|...+... .+...|++||++.+.+++.++.+ .|+++++|+|| +..+...... . ....
T Consensus 179 S~~~~~~~------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~-~-~~~~----- 238 (322)
T 3qlj_A 179 SGAGLQGS------------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVF-A-EMMA----- 238 (322)
T ss_dssp CHHHHHCB------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSC-C-C--------
T ss_pred CHHHccCC------------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhh-h-hhhh-----
Confidence 97665321 34578999999999999999987 48999999999 7665332110 0 0000
Q ss_pred CceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc-----------------c
Q 042406 283 KRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV-----------------P 345 (424)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----------------s 345 (424)
.......++.++|+|.+++.++...... ..|++|++.+|... +
T Consensus 239 ----------~~~~~~~~~~pedva~~v~~L~s~~~~~----------itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~ 298 (322)
T 3qlj_A 239 ----------TQDQDFDAMAPENVSPLVVWLGSAEARD----------VTGKVFEVEGGKIRVAEGWAHGPQIDKGARWD 298 (322)
T ss_dssp ---------------CCTTCGGGTHHHHHHHTSGGGGG----------CCSCEEEEETTEEEEEECCEEEEEEECSSCCC
T ss_pred ----------ccccccCCCCHHHHHHHHHHHhCccccC----------CCCCEEEECCCccccCCCcccccccCccCCCC
Confidence 1112234678999999999988665432 34489999887654 7
Q ss_pred HHHHHHHHHHHhCccc
Q 042406 346 VSRLVSLLEKILKVKA 361 (424)
Q Consensus 346 ~~el~~~i~~~~g~~~ 361 (424)
+.|+++.+.+.++.+.
T Consensus 299 ~~el~~~~~~~~~~~~ 314 (322)
T 3qlj_A 299 PAELGPVVADLLGKAR 314 (322)
T ss_dssp GGGHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhhccC
Confidence 7999999999998653
No 170
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=99.94 E-value=1.4e-26 Score=218.50 Aligned_cols=234 Identities=11% Similarity=0.047 Sum_probs=170.1
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchh-hhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYE-TSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|+.+... ....... . ....++.++.+|++|.++++++++.+
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~Dv~d~~~v~~~~~~~ 122 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALI-E-ECGRKAVLLPGDLSDESFARSLVHKA 122 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHH-H-HTTCCEEECCCCTTSHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHH-H-HcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 3568999999999999999999999999999999998633211 1111111 1 12457899999999999999888754
Q ss_pred -----CccEEEEcccccCc-h----hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV-R----YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~-~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||.... . ...++.+..+++|+.|+.++++++..... ..+||++||...+...
T Consensus 123 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~--------- 193 (294)
T 3r3s_A 123 REALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS--------- 193 (294)
T ss_dssp HHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC---------
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC---------
Confidence 68999999997542 1 12334467999999999999999877542 2389999998887631
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|+.||++.+.+++.++.++ |+++++|+||.|+++..............+ ........
T Consensus 194 ---~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~------------~~~~p~~r 258 (294)
T 3r3s_A 194 ---PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQF------------GQQTPMKR 258 (294)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTT------------TTTSTTSS
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHH------------HhcCCCCC
Confidence 345789999999999999999876 899999999999986311000000000000 11222334
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
+..++|+|++++.++...... ..|+++++.+|..+
T Consensus 259 ~~~p~dvA~~v~~L~s~~~~~----------itG~~i~vdGG~~l 293 (294)
T 3r3s_A 259 AGQPAELAPVYVYLASQESSY----------VTAEVHGVCGGEHL 293 (294)
T ss_dssp CBCGGGGHHHHHHHHSGGGTT----------CCSCEEEESTTCCC
T ss_pred CcCHHHHHHHHHHHhCccccC----------CCCCEEEECCCccC
Confidence 778999999999988765432 44589999988654
No 171
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=99.94 E-value=1.1e-25 Score=209.93 Aligned_cols=234 Identities=13% Similarity=0.080 Sum_probs=169.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+.++++|++|||||+|+||++++++|+++|++|++++++............. ....++.++.+|++|.++++++++.+
T Consensus 13 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 13 PGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIK--ALGSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--HTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--hcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3467899999999999999999999999999999988765332221111111 12467899999999999999998865
Q ss_pred -----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++..... ..+||++||......
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------- 159 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDF----------- 159 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTC-----------
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccC-----------
Confidence 7899999999865422 2334467899999999999998876542 238999999763211
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC----------CCcHHHHHHHHHcCCceeEEec
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP----------DMAYFFFTRDIIRGKRITVYEA 290 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 290 (424)
...+...|++||++.+.+++.++.++ |+++++|+||.|.++.... ..........+....+
T Consensus 160 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------ 233 (270)
T 3is3_A 160 SVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASP------ 233 (270)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHST------
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCC------
Confidence 11456789999999999999999874 8999999999999874210 0011112222222111
Q ss_pred CCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 291 PDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 291 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 234 ------~~r~~~p~dvA~~v~~L~s~~~~~----------itG~~i~vdGG~ 269 (270)
T 3is3_A 234 ------LHRNGWPQDVANVVGFLVSKEGEW----------VNGKVLTLDGGA 269 (270)
T ss_dssp ------TCSCBCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTC
T ss_pred ------CCCCCCHHHHHHHHHHHcCCccCC----------ccCcEEEeCCCC
Confidence 123678999999999988765432 445899998874
No 172
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=99.94 E-value=6.2e-26 Score=208.58 Aligned_cols=226 Identities=13% Similarity=0.099 Sum_probs=162.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeC-CCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDN-FNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+++|+++||||+|+||++++++|+++|++|++++| +.+........... ...++.++.+|++|.++++++++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK---LGSDAIAVRADVANAEDVTNMVKQTVD 78 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999 43332222221111 1356889999999999999988854
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 79 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~--------- 148 (246)
T 2uvd_A 79 VFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHG-RIVNIASVVGVTGN--------- 148 (246)
T ss_dssp HHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCTHHHHCC---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECCHHhcCCC---------
Confidence 679999999986432 122334679999999977666554 444544 99999997664321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|++||.+.+.+++.++.++ |+++++|+||.|.++...... ......+....+ ...
T Consensus 149 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p------------~~~ 211 (246)
T 2uvd_A 149 ---PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKLIP------------AAQ 211 (246)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHTCT------------TCS
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhcCC------------CCC
Confidence 345789999999999999988764 899999999999987533210 111122222211 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+++++|+|++++.++...... ..|+++++.+|.
T Consensus 212 ~~~~~dvA~~~~~l~s~~~~~----------~tG~~~~vdgG~ 244 (246)
T 2uvd_A 212 FGEAQDIANAVTFFASDQSKY----------ITGQTLNVDGGM 244 (246)
T ss_dssp CBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTS
T ss_pred CcCHHHHHHHHHHHcCchhcC----------CCCCEEEECcCc
Confidence 789999999999988654322 344899998874
No 173
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=99.94 E-value=3.6e-26 Score=212.29 Aligned_cols=237 Identities=14% Similarity=0.083 Sum_probs=170.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+.+............ ...++.++.+|++|.++++++++++
T Consensus 11 ~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 88 (265)
T 1h5q_A 11 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE--FGVKTKAYQCDVSNTDIVTKTIQQIDA 88 (265)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH--HTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHh--cCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999765443332222211 2357899999999999999888764
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.++.++++++.+. +..++||++||...+..... ...
T Consensus 89 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~----~~~ 164 (265)
T 1h5q_A 89 DLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS----SLN 164 (265)
T ss_dssp HSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE----ETT
T ss_pred hcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc----ccc
Confidence 4799999999864321 22334678999999999998887543 32248999999877543210 001
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
...+...|+.||++.+.+++.++.++ |+++++||||.|+++..... ...+...+....+ ...
T Consensus 165 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~------------~~~ 229 (265)
T 1h5q_A 165 -GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIP------------LNR 229 (265)
T ss_dssp -EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCT------------TSS
T ss_pred -ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc--chhHHHHHHhcCc------------ccC
Confidence 11346789999999999999998774 89999999999998854321 1122222222211 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+++++|+|++++.++...... ..|++|++.+|..
T Consensus 230 ~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 230 FAQPEEMTGQAILLLSDHATY----------MTGGEYFIDGGQL 263 (265)
T ss_dssp CBCGGGGHHHHHHHHSGGGTT----------CCSCEEEECTTGG
T ss_pred CCCHHHHHHHHHhhccCchhc----------CcCcEEEecCCEe
Confidence 788999999999998765322 3448999998753
No 174
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=99.94 E-value=1.2e-25 Score=208.32 Aligned_cols=220 Identities=15% Similarity=0.086 Sum_probs=162.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........ . ...+.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~~D~~~~~~v~~~~~~~~~ 77 (260)
T 1nff_A 4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE-----L-ADAARYVHLDVTQPAQWKAAVDTAVT 77 (260)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----T-GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----h-hcCceEEEecCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999965432221111 1 124889999999999999988854
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||..... ...++.+..+++|+.|+.+++++ +++.+.+ +||++||...+...
T Consensus 78 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~--------- 147 (260)
T 1nff_A 78 AFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRG-SIINISSIEGLAGT--------- 147 (260)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC---------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEeehhhcCCC---------
Confidence 679999999986432 12234467999999998665554 4555544 99999998876421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|+.||.+.+.+++.++.+ .|+++++||||.|+++..... ...+. ......
T Consensus 148 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------------~~~~~-------~~~~~~ 205 (260)
T 1nff_A 148 ---VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV------------PEDIF-------QTALGR 205 (260)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS------------CTTCS-------CCSSSS
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccc------------hhhHH-------hCccCC
Confidence 34578999999999999999877 489999999999999843200 00000 011224
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+.+++|+|++++.++...... ..|++|++.+|..
T Consensus 206 ~~~~~dvA~~v~~l~s~~~~~----------~~G~~~~v~gG~~ 239 (260)
T 1nff_A 206 AAEPVEVSNLVVYLASDESSY----------STGAEFVVDGGTV 239 (260)
T ss_dssp CBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGG
T ss_pred CCCHHHHHHHHHHHhCccccC----------CcCCEEEECCCee
Confidence 789999999999988764322 3348999998754
No 175
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=99.94 E-value=1.1e-25 Score=209.18 Aligned_cols=226 Identities=14% Similarity=0.112 Sum_probs=165.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+++++|+|+||||+|+||++++++|+++|++|++++|+.+......... ..++.++.+|++|.++++++++.+
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------GNNCVFAPADVTSEKDVQTALALAK 81 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh------CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 3578899999999999999999999999999999999876543322211 357899999999999999998854
Q ss_pred ----CccEEEEcccccCch----------hhccChHHHHHHHHHHHHHHHHHHHhc----------CCCCeEEEecCCcc
Q 042406 154 ----AFTHVMHLAAQAGVR----------YAMQNPNSYVESNIAGFVNLLETCKSS----------DPQPAIVWASSSSV 209 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~----------~~~~~~~~~~~~N~~g~~~ll~a~~~~----------~~~~~~v~~SS~~v 209 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.+. +. .+||++||...
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~-~~iv~isS~~~ 160 (265)
T 2o23_A 82 GKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQR-GVIINTASVAA 160 (265)
T ss_dssp HHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCC-EEEEEECCTHH
T ss_pred HHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCC-cEEEEeCChhh
Confidence 679999999986432 122334678999999999999887654 33 38999999877
Q ss_pred cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCcee
Q 042406 210 YGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRIT 286 (424)
Q Consensus 210 yg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 286 (424)
+... .+...|+.||++.+.+++.++.++ |+++++|+||.|.++.... ........+....+.
T Consensus 161 ~~~~------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~- 225 (265)
T 2o23_A 161 FEGQ------------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTS--LPEKVCNFLASQVPF- 225 (265)
T ss_dssp HHCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSS-
T ss_pred cCCC------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccc--cCHHHHHHHHHcCCC-
Confidence 6421 345789999999999999998764 8999999999998874321 000011111111110
Q ss_pred EEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 287 VYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 287 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
...+++++|+|++++.+++... ..|+++++.+|..+
T Consensus 226 ----------~~~~~~~~dva~~~~~l~~~~~------------~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 226 ----------PSRLGDPAEYAHLVQAIIENPF------------LNGEVIRLDGAIRM 261 (265)
T ss_dssp ----------SCSCBCHHHHHHHHHHHHHCTT------------CCSCEEEESTTCCC
T ss_pred ----------cCCCCCHHHHHHHHHHHhhcCc------------cCceEEEECCCEec
Confidence 0237899999999999886432 34489999887544
No 176
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=99.94 E-value=6e-26 Score=212.68 Aligned_cols=232 Identities=15% Similarity=0.051 Sum_probs=157.3
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc-hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
+..+++|++|||||+|+||+++++.|+++|++|++++|.... ......... ....++.++++|++|.++++++++.
T Consensus 24 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~d~~~v~~~~~~ 100 (280)
T 4da9_A 24 MTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELS---GLGARVIFLRADLADLSSHQATVDA 100 (280)
T ss_dssp CSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH---HTTCCEEEEECCTTSGGGHHHHHHH
T ss_pred hhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH---hcCCcEEEEEecCCCHHHHHHHHHH
Confidence 445788999999999999999999999999999999974432 222212111 1245799999999999999998886
Q ss_pred c-----CccEEEEcccccCc------hhhccChHHHHHHHHHHHHHHHHHHHhc----CC--CCeEEEecCCcccCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGV------RYAMQNPNSYVESNIAGFVNLLETCKSS----DP--QPAIVWASSSSVYGVNKK 215 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~--~~~~v~~SS~~vyg~~~~ 215 (424)
+ ++|+||||||.... ....++.+..+++|+.|+.++++++... +. ..+||++||...+..
T Consensus 101 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~--- 177 (280)
T 4da9_A 101 VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMT--- 177 (280)
T ss_dssp HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------
T ss_pred HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccC---
Confidence 5 68999999998321 1123344678999999998887776443 21 238999999776532
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCC
Q 042406 216 VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 216 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||.|.++..... .......+.. .
T Consensus 178 ---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~-~--------- 236 (280)
T 4da9_A 178 ---------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAV--SGKYDGLIES-G--------- 236 (280)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------
T ss_pred ---------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhc--chhHHHHHhh-c---------
Confidence 134578999999999999999987 489999999999998743210 0011111110 0
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
......+.+++|+|++++.++...... ..|+++++.+|..
T Consensus 237 -~~p~~r~~~pedvA~~v~~L~s~~~~~----------itG~~i~vdGG~~ 276 (280)
T 4da9_A 237 -LVPMRRWGEPEDIGNIVAGLAGGQFGF----------ATGSVIQADGGLS 276 (280)
T ss_dssp ------CCBCHHHHHHHHHHHHTSTTGG----------GTTCEEEESTTCC
T ss_pred -CCCcCCcCCHHHHHHHHHHHhCccccC----------CCCCEEEECCCcc
Confidence 111234788999999999988765432 3458999998754
No 177
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=99.94 E-value=1.1e-25 Score=210.32 Aligned_cols=231 Identities=13% Similarity=0.062 Sum_probs=171.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++++|++|.++++++++.+
T Consensus 28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG---VGGKALPIRCDVTQPDQVRGMLDQMT 104 (276)
T ss_dssp GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 357899999999999999999999999999999999987655444333322 2357899999999999999998865
Q ss_pred ----CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||....... .++.+..+++|+.|+.++++++.. .+...+||++||.+.+....
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~------- 177 (276)
T 3r1i_A 105 GELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI------- 177 (276)
T ss_dssp HHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC-------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC-------
Confidence 68999999998654322 223456889999999988887644 33224899999977654211
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||.|.++..... ......+....+ ..
T Consensus 178 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~---~~~~~~~~~~~p------------~~ 239 (276)
T 3r1i_A 178 ---PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL---ADYHALWEPKIP------------LG 239 (276)
T ss_dssp ---SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG---GGGHHHHGGGST------------TS
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc---hHHHHHHHhcCC------------CC
Confidence 134578999999999999999987 489999999999998754321 111222222111 12
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.+..++|+|++++.++...... ..|+++++.+|..
T Consensus 240 r~~~pedvA~~v~fL~s~~~~~----------itG~~i~vdGG~~ 274 (276)
T 3r1i_A 240 RMGRPEELTGLYLYLASAASSY----------MTGSDIVIDGGYT 274 (276)
T ss_dssp SCBCGGGSHHHHHHHHSGGGTT----------CCSCEEEESTTTT
T ss_pred CCcCHHHHHHHHHHHcCccccC----------ccCcEEEECcCcc
Confidence 3778899999999988765432 4458999988753
No 178
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=99.94 E-value=1.1e-25 Score=207.60 Aligned_cols=226 Identities=16% Similarity=0.097 Sum_probs=166.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccC--CCHHHHHHHhhc
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI--NDKSLLDKIFNV 152 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~~~v~~~~~~ 152 (424)
..+++|+++||||+|+||++++++|+++|++|++++|+.+........... .....+.++.+|+ +|.++++++++.
T Consensus 8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~ 85 (252)
T 3f1l_A 8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINE--ETGRQPQWFILDLLTCTSENCQQLAQR 85 (252)
T ss_dssp TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--hcCCCceEEEEecccCCHHHHHHHHHH
Confidence 357899999999999999999999999999999999976554443332222 1234788999999 999999888876
Q ss_pred c-----CccEEEEcccccCc--h---hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGV--R---YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~--~---~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
+ ++|+||||||.... . ...++.+..+++|+.|+.++++++ ++.+. .+||++||...+..
T Consensus 86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~-g~iv~isS~~~~~~------ 158 (252)
T 3f1l_A 86 IAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDA-GSLVFTSSSVGRQG------ 158 (252)
T ss_dssp HHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSS-CEEEEECCGGGTSC------
T ss_pred HHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCC-CEEEEECChhhccC------
Confidence 5 68999999998532 1 122233578999999999988887 44444 39999999776542
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHhC--CcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIYG--LSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
..+...|++||++.+.+++.++.+++ +++++|+||.|..+ +....... ..
T Consensus 159 ------~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~----------~~~~~~~~------------~~ 210 (252)
T 3f1l_A 159 ------RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTA----------MRASAFPT------------ED 210 (252)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSH----------HHHHHCTT------------CC
T ss_pred ------CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCc----------hhhhhCCc------------cc
Confidence 14457899999999999999998863 99999999999765 22111111 11
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHH
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVS 347 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~ 347 (424)
...+...+|+|.+++.++...... ..|+++++.+|...++.
T Consensus 211 ~~~~~~p~dva~~~~~L~s~~~~~----------itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 211 PQKLKTPADIMPLYLWLMGDDSRR----------KTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp GGGSBCTGGGHHHHHHHHSGGGTT----------CCSCEEESSCC------
T ss_pred hhccCCHHHHHHHHHHHcCccccC----------CCCCEEEeCCCcCCCCC
Confidence 224778899999999988765432 44589999998876654
No 179
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=99.94 E-value=4.3e-26 Score=216.16 Aligned_cols=235 Identities=13% Similarity=0.111 Sum_probs=168.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhh--hccCCeEEEEccCCCHHHHHHHhhc
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGL--LERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
..+++|+|+||||+|+||++++++|+++|++|++++|+.+............. ....++.++.+|++|.++++++++.
T Consensus 14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 35788999999999999999999999999999999997654333322222110 1245789999999999999998886
Q ss_pred c-----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
+ ++|+||||||..... ...++.+..+++|+.|+.++++++... +. ++||++||.+.++.
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~------- 165 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHG-GSIVNIIVPTKAGF------- 165 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHC-EEEEEECCCCTTCC-------
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CeEEEEEeecccCC-------
Confidence 4 579999999965322 122334678999999999999987552 22 38999999873321
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC--cHHHHHHHHHcCCceeEEecCCCC
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM--AYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
.....|+.+|.+.+.+++.++.++ |+++++||||.|+|+...... ....+...+...
T Consensus 166 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------------ 227 (303)
T 1yxm_A 166 ------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK------------ 227 (303)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG------------
T ss_pred ------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc------------
Confidence 345789999999999999998875 899999999999998321110 000111111110
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
.....+.+++|+|++++.++...... ..|+++++.+|...+
T Consensus 228 ~p~~~~~~~~dvA~~i~~l~~~~~~~----------~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 228 IPAKRIGVPEEVSSVVCFLLSPAASF----------ITGQSVDVDGGRSLY 268 (303)
T ss_dssp STTSSCBCTHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGGC
T ss_pred CcccCCCCHHHHHHHHHHHhCccccc----------CCCcEEEECCCeecc
Confidence 01123789999999999998654321 344899999886543
No 180
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=99.94 E-value=3.2e-25 Score=209.71 Aligned_cols=238 Identities=13% Similarity=0.068 Sum_probs=169.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch--------hhhHHHHHhh-hhccCCeEEEEccCCCHH
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--------ETSLKKARKG-LLERAGVFVIDADINDKS 144 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~ 144 (424)
..++++|++|||||+|+||+++++.|+++|++|++++|+.... .+.......+ .....++.++.+|++|.+
T Consensus 23 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 102 (299)
T 3t7c_A 23 AGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFD 102 (299)
T ss_dssp CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHH
Confidence 3457899999999999999999999999999999999973210 1111111111 112457899999999999
Q ss_pred HHHHHhhcc-----CccEEEEcccccCchh-----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCccc
Q 042406 145 LLDKIFNVV-----AFTHVMHLAAQAGVRY-----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVY 210 (424)
Q Consensus 145 ~v~~~~~~~-----~~d~vi~~Ag~~~~~~-----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vy 210 (424)
+++++++.+ ++|+||||||...... ..++.+..+++|+.|+.++++++... +...+||++||...+
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~ 182 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGL 182 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc
Confidence 999988754 6899999999865322 22334679999999999988876442 323489999998776
Q ss_pred CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCc------------HHHH
Q 042406 211 GVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMA------------YFFF 275 (424)
Q Consensus 211 g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~------------~~~~ 275 (424)
... .....|++||++.+.+++.++.++ |+++++|+||.|.++....... ...+
T Consensus 183 ~~~------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 250 (299)
T 3t7c_A 183 RGA------------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDF 250 (299)
T ss_dssp SCC------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred cCC------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHH
Confidence 421 345789999999999999999875 8999999999999985432100 0000
Q ss_pred HHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 276 TRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
......... .. ..+...+|+|++++.++...... ..|+++++.+|..+
T Consensus 251 ~~~~~~~~~----------~p-~r~~~pedvA~~v~fL~s~~a~~----------itG~~i~vdGG~~l 298 (299)
T 3t7c_A 251 QVASRQMHV----------LP-IPYVEPADISNAILFLVSDDARY----------ITGVSLPVDGGALL 298 (299)
T ss_dssp HHHHHHHSS----------SS-CSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGG
T ss_pred HHHhhhhcc----------cC-cCCCCHHHHHHHHHHHhCccccc----------CcCCEEeeCCCccc
Confidence 000000000 00 23788999999999998765432 44589999987643
No 181
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=99.94 E-value=4.6e-26 Score=212.65 Aligned_cols=228 Identities=14% Similarity=0.100 Sum_probs=159.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-eCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.++|+||||||+|+||++++++|+++|++|+++ .|+.+..+....... ....++.++.+|++|.++++++++.+
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 100 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAIT---ESGGEAVAIPGDVGNAADIAAMFSAVDR 100 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHH---hcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999999999887 444332222222111 12357899999999999999998866
Q ss_pred ---CccEEEEcccccCc-h----hhccChHHHHHHHHHHHHHHHHHHHhc------CCCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV-R----YAMQNPNSYVESNIAGFVNLLETCKSS------DPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~-~----~~~~~~~~~~~~N~~g~~~ll~a~~~~------~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||.... . ...++.+..+++|+.|+.++++++... +...+||++||...+....
T Consensus 101 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~----- 175 (272)
T 4e3z_A 101 QFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA----- 175 (272)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT-----
T ss_pred hCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC-----
Confidence 78999999998653 1 123344679999999999988877543 1224899999977653210
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.....|++||++.+.+++.++.++ |+++++|+||.|.++...... .+.....+.. ...
T Consensus 176 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~------------~~~ 236 (272)
T 4e3z_A 176 ------TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG-LPDRAREMAP------------SVP 236 (272)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------------------CCT
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC-ChHHHHHHhh------------cCC
Confidence 234679999999999999998876 899999999999988543210 1111111111 122
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
...+.+++|+|++++.++...... ..|++|++.+|
T Consensus 237 ~~~~~~~edvA~~i~~l~s~~~~~----------~tG~~i~vdgG 271 (272)
T 4e3z_A 237 MQRAGMPEEVADAILYLLSPSASY----------VTGSILNVSGG 271 (272)
T ss_dssp TSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTT
T ss_pred cCCCcCHHHHHHHHHHHhCCcccc----------ccCCEEeecCC
Confidence 234678999999999998765432 34589999876
No 182
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=99.94 E-value=1.3e-25 Score=209.88 Aligned_cols=229 Identities=11% Similarity=0.059 Sum_probs=167.8
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++|+++||||+ |+||+++++.|+++|++|++++|+.+ ........... ...+.++.+|++|.++++++++.+
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~ 78 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE---LNSPYVYELDVSKEEHFKSLYNSV 78 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHh---cCCcEEEEcCCCCHHHHHHHHHHH
Confidence 3678999999999 99999999999999999999999764 22222222221 124789999999999999988765
Q ss_pred -----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++..... ..+||++||.+.+..
T Consensus 79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------- 151 (275)
T 2pd4_A 79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY------- 151 (275)
T ss_dssp HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-------
T ss_pred HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCC-------
Confidence 68999999998643 122334467999999999999999877521 138999999766532
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++..........+...+....++
T Consensus 152 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~----------- 215 (275)
T 2pd4_A 152 -----MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL----------- 215 (275)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT-----------
T ss_pred -----CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc-----------
Confidence 1345789999999999999998876 899999999999987532211122223333222211
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+.+.+|+|++++.++...... ..|+++++.+|.
T Consensus 216 -~~~~~p~dva~~~~~l~s~~~~~----------~tG~~~~vdgg~ 250 (275)
T 2pd4_A 216 -RKNVSLEEVGNAGMYLLSSLSSG----------VSGEVHFVDAGY 250 (275)
T ss_dssp -SSCCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred -CCCCCHHHHHHHHHHHhCccccC----------CCCCEEEECCCc
Confidence 12668999999999988654321 344889998774
No 183
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=99.94 E-value=3.2e-26 Score=214.28 Aligned_cols=227 Identities=16% Similarity=0.097 Sum_probs=166.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||+++++.|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 95 (277)
T 2rhc_B 19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE---AGVEADGRTCDVRSVPEIEALVAAVVE 95 (277)
T ss_dssp CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCceEEEECCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999976443332222211 1356899999999999999888754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc------CCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS------DPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~------~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.+. +. ++||++||...+..
T Consensus 96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~-g~iv~isS~~~~~~-------- 166 (277)
T 2rhc_B 96 RYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGT-GRIVNIASTGGKQG-------- 166 (277)
T ss_dssp HTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTE-EEEEEECCGGGTSC--------
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCC-eEEEEECccccccC--------
Confidence 6799999999754321 12234679999999999999987654 33 39999999766532
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcH-----------HHHHHHHHcCCcee
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAY-----------FFFTRDIIRGKRIT 286 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~-----------~~~~~~~~~~~~~~ 286 (424)
..+...|++||.+.+.+++.++.++ |+++++|+||.|+++.... .. ......+...
T Consensus 167 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---- 236 (277)
T 2rhc_B 167 ----VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAAS--VREHYSDIWEVSTEEAFDRITAR---- 236 (277)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHH--HHHHHHHHHTCCHHHHHHHHHHH----
T ss_pred ----CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhh--hhhhcccccccchHHHHHHHHhc----
Confidence 1345789999999999999998774 7999999999999873210 00 0001111111
Q ss_pred EEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 287 VYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 287 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.....+++++|+|++++.++..+... ..|++|++.+|.
T Consensus 237 --------~p~~r~~~~~dvA~~v~~l~s~~~~~----------~tG~~~~vdGG~ 274 (277)
T 2rhc_B 237 --------VPIGRYVQPSEVAEMVAYLIGPGAAA----------VTAQALNVCGGL 274 (277)
T ss_dssp --------STTSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTC
T ss_pred --------CCCCCCcCHHHHHHHHHHHhCchhcC----------CCCcEEEECCCc
Confidence 11234889999999999988765322 344899998874
No 184
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.94 E-value=3.3e-26 Score=214.55 Aligned_cols=235 Identities=14% Similarity=0.052 Sum_probs=166.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||++++++|+++|++|++++|+.+.................++.++.+|++|.++++++++.+
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK 82 (280)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999765433322222111000116899999999999999888764
Q ss_pred ---CccEEEEcccccCchh--------hccChHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY--------AMQNPNSYVESNIAGFVNLLETCKSSDP--QPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~--------~~~~~~~~~~~N~~g~~~ll~a~~~~~~--~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++..... +++||++||...+...
T Consensus 83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------- 155 (280)
T 1xkq_A 83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA------- 155 (280)
T ss_dssp HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC-------
T ss_pred hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC-------
Confidence 6799999999754321 2233467899999999998887754211 1499999998776431
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCC-cH------HHHHHHHHcCCceeEEec
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDM-AY------FFFTRDIIRGKRITVYEA 290 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~-~~------~~~~~~~~~~~~~~~~~~ 290 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||.|+++...... .. ..+...+...
T Consensus 156 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 223 (280)
T 1xkq_A 156 ----QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKEC-------- 223 (280)
T ss_dssp ----CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTT--------
T ss_pred ----CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcC--------
Confidence 034578999999999999999866 4899999999999987421100 00 0011111110
Q ss_pred CCCCccccccccHHHHHHHHHHHhhhc-cccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 291 PDGASVARDFTYIDDIVKGCLAGLDTA-KKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 291 ~~~~~~~~~~i~v~Dva~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.....+.+++|+|++++.++... ... ..|+++++.+|..
T Consensus 224 ----~p~~~~~~pedvA~~v~~l~s~~~~~~----------~tG~~i~vdgG~~ 263 (280)
T 1xkq_A 224 ----IPIGAAGKPEHIANIILFLADRNLSFY----------ILGQSIVADGGTS 263 (280)
T ss_dssp ----CTTSSCBCHHHHHHHHHHHHCHHHHTT----------CCSCEEEESTTGG
T ss_pred ----CCCCCCCCHHHHHHHHHHhcCcccccC----------ccCCeEEECCCcc
Confidence 11224889999999999988754 321 3448999988754
No 185
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=99.94 E-value=8.3e-26 Score=209.46 Aligned_cols=237 Identities=11% Similarity=0.048 Sum_probs=162.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc-hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY-YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+++|+++||||+|+||+++++.|+++|++|++++|+.+. .......... ....++.++.+|++|.++++++++.+
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 79 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAA--QHGVKVLYDGADLSKGEAVRGLVDNAVR 79 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHH--HHTSCEEEECCCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHh--ccCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 568999999999999999999999999999999997654 3322222111 11346889999999999999988754
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++. +.+.+ +||++||...+...
T Consensus 80 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~--------- 149 (260)
T 1x1t_A 80 QMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFG-RIINIASAHGLVAS--------- 149 (260)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC---------
T ss_pred hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEECcHHhCcCC---------
Confidence 679999999975432 1223346799999999988887764 34443 99999998776421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCc-eeEEecC-CCCccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKR-ITVYEAP-DGASVA 297 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~ 297 (424)
.+...|+.||.+.+.+++.++.++ |+++++|+||.|.+|..... ....... .+.. -...... ......
T Consensus 150 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~p~ 222 (260)
T 1x1t_A 150 ---ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQ--ISALAEK--NGVDQETAARELLSEKQPS 222 (260)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------------CHHHHCTT
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHh--hhhhccc--cCCchHHHHHHHhhccCCC
Confidence 345789999999999999998775 89999999999998853211 0000000 0000 0000000 000112
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+.+++|+|++++.++...... ..|++|++.+|.
T Consensus 223 ~~~~~p~dva~~~~~l~s~~~~~----------~tG~~~~vdgG~ 257 (260)
T 1x1t_A 223 LQFVTPEQLGGTAVFLASDAAAQ----------ITGTTVSVDGGW 257 (260)
T ss_dssp CCCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred CCCcCHHHHHHHHHHHhChhhcC----------CCCCEEEECCCc
Confidence 34889999999999988754322 344899998874
No 186
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=99.94 E-value=1.1e-25 Score=211.62 Aligned_cols=228 Identities=11% Similarity=0.074 Sum_probs=164.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|+|+||||+|+||+++++.|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 40 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~d~~~v~~~~~~~~ 116 (285)
T 2c07_A 40 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS---FGYESSGYAGDVSKKEEISEVINKIL 116 (285)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh---cCCceeEEECCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999999998865433322222111 1356889999999999999988754
Q ss_pred ----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++. +.+.+ +||++||...+...
T Consensus 117 ~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~iv~isS~~~~~~~-------- 187 (285)
T 2c07_A 117 TEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYG-RIINISSIVGLTGN-------- 187 (285)
T ss_dssp HHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCE-EEEEECCTHHHHCC--------
T ss_pred HhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC-EEEEECChhhccCC--------
Confidence 679999999986432 1233446789999999877777664 44544 99999998665321
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.+...|++||.+.+.+++.++.++ |+++++|+||.+.++.... ....+...+....+ ..
T Consensus 188 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~------------~~ 249 (285)
T 2c07_A 188 ----VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK--ISEQIKKNIISNIP------------AG 249 (285)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-------CCHHHHHHHHTTCT------------TS
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh--cCHHHHHHHHhhCC------------CC
Confidence 345789999999999999998775 8999999999999875332 11222233322211 12
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+++++|+|++++.++...... ..|++|++.+|.
T Consensus 250 ~~~~~~dvA~~~~~l~~~~~~~----------~~G~~i~v~gG~ 283 (285)
T 2c07_A 250 RMGTPEEVANLACFLSSDKSGY----------INGRVFVIDGGL 283 (285)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTS
T ss_pred CCCCHHHHHHHHHHHhCCCcCC----------CCCCEEEeCCCc
Confidence 3889999999999988765421 334899998874
No 187
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=99.94 E-value=3.5e-25 Score=205.89 Aligned_cols=233 Identities=11% Similarity=0.075 Sum_probs=172.1
Q ss_pred CCCCCeEEEEcCCCh--hHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGF--VGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
++++|+++||||+|+ ||++++++|+++|++|++++|+.+..+ ...... ......++.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 81 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEK-SVHELA-GTLDRNDSIILPCDVTNDAEIETCFASI 81 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHH-HTSSSCCCEEEECCCSSSHHHHHHHHHH
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHH-HHHHHH-HhcCCCCceEEeCCCCCHHHHHHHHHHH
Confidence 578899999999976 999999999999999999999743222 222221 1223347999999999999999998865
Q ss_pred -----CccEEEEcccccCc--------hhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV--------RYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~--------~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||.... ....++.+..+++|+.++.++++++..... ..+||++||.+.+..
T Consensus 82 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~------- 154 (266)
T 3oig_A 82 KEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELV------- 154 (266)
T ss_dssp HHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSC-------
T ss_pred HHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccccc-------
Confidence 68999999998652 112223457899999999999999877543 238999999777642
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
......|++||++.+.+++.++.++ |+++++|+||.|.++..............+....+.
T Consensus 155 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----------- 218 (266)
T 3oig_A 155 -----MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL----------- 218 (266)
T ss_dssp -----CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT-----------
T ss_pred -----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC-----------
Confidence 1345789999999999999998775 899999999999987543322222333333332221
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
..+.+.+|+|++++.++...... ..|+++++.+|-..
T Consensus 219 -~~~~~p~dva~~v~~l~s~~~~~----------~tG~~i~vdGG~~~ 255 (266)
T 3oig_A 219 -RRTTTPEEVGDTAAFLFSDMSRG----------ITGENLHVDSGFHI 255 (266)
T ss_dssp -SSCCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGGG
T ss_pred -CCCCCHHHHHHHHHHHcCCchhc----------CcCCEEEECCCeEE
Confidence 23678999999999998765432 34589999887543
No 188
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=99.94 E-value=2e-25 Score=211.27 Aligned_cols=221 Identities=12% Similarity=0.084 Sum_probs=158.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+..+++|+||||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 26 m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 26 LSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG---QGFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp CCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred HhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCceEEEEccCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999976554443333222 2457899999999999999988865
Q ss_pred -----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++. +.+...+||++||...+..
T Consensus 103 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~-------- 174 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP-------- 174 (301)
T ss_dssp HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC--------
T ss_pred HHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC--------
Confidence 689999999986432 1233446799999999999888764 3342348999999877642
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHH-----HHcCCceeEEecCC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRD-----IIRGKRITVYEAPD 292 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 292 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++... ..... .....+...+ +
T Consensus 175 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~------~~~~~~~~~~~~~~~~~~~~---~ 241 (301)
T 3tjr_A 175 ----NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVS------NSERIRGADYGMSATPEGAF---G 241 (301)
T ss_dssp ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHH------HHHHHC------------------
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccc------ccccccchhhccccChhhhc---c
Confidence 1445789999999999999998775 899999999999876211 00000 0001111111 1
Q ss_pred CCccccccccHHHHHHHHHHHhhhcc
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
.......+++++|+|++++.+++...
T Consensus 242 ~~~~~~~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 242 PLPTQDESVSADDVARLTADAILANR 267 (301)
T ss_dssp -------CCCHHHHHHHHHHHHHHTC
T ss_pred ccccccCCCCHHHHHHHHHHHHhcCC
Confidence 22234468999999999999998764
No 189
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=99.94 E-value=8e-26 Score=208.28 Aligned_cols=229 Identities=14% Similarity=0.074 Sum_probs=163.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+.+......... ....++.++.+|++|.+++.++++.+
T Consensus 3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (251)
T 1zk4_A 3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSV----GTPDQIQFFQHDSSDEDGWTKLFDATEK 78 (251)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH----CCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----hccCceEEEECCCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999654322221111 11257899999999999999988864
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++.++ +++.+..++||++||...+...
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~--------- 149 (251)
T 1zk4_A 79 AFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD--------- 149 (251)
T ss_dssp HHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC---------
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC---------
Confidence 5799999999754321 2223467899999987766555 4455542489999998876531
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH-----hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI-----YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.+...|+.||++.+.+++.++.+ .|+++++||||.++++..... .. ...... .. .....
T Consensus 150 ---~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~-~~~~~~-~~----------~~~~~ 213 (251)
T 1zk4_A 150 ---PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PG-AEEAMS-QR----------TKTPM 213 (251)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TT-HHHHHT-ST----------TTCTT
T ss_pred ---CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-Cc-hhhhHH-Hh----------hcCCC
Confidence 34578999999999999988763 479999999999998743210 00 000000 00 11112
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
..+++++|+|++++.++...... ..|++|++.+|..
T Consensus 214 ~~~~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 214 GHIGEPNDIAYICVYLASNESKF----------ATGSEFVVDGGYT 249 (251)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGG
T ss_pred CCCcCHHHHHHHHHHHcCccccc----------ccCcEEEECCCcc
Confidence 34889999999999998765321 2348999998753
No 190
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=99.94 E-value=2e-25 Score=206.26 Aligned_cols=231 Identities=13% Similarity=0.070 Sum_probs=163.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||++++++|+++|++|++++|+.+ ......... ...++.++.+|++|.++++++++.+
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 76 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIAR---HGVKAVHHPADLSDVAQIEALFALAERE 76 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHT---TSCCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHh---cCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence 56899999999999999999999999999999999765 221111111 1346889999999999999998854
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.|+.++.++ +++.+.+ +||++||.+.+...
T Consensus 77 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~---------- 145 (255)
T 2q2v_A 77 FGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWG-RIINIASVHGLVGS---------- 145 (255)
T ss_dssp HSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCGGGTSCC----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEEcCchhccCC----------
Confidence 6799999999754321 2233467999999987666554 4555544 99999998776421
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHH--HHHcCCc---eeEEecCCCCc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTR--DIIRGKR---ITVYEAPDGAS 295 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~ 295 (424)
.+...|+.||.+.+.+++.++.++ |+++++|+||.|++|... .+.. .-..+.. ...+. ....
T Consensus 146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~~ 215 (255)
T 2q2v_A 146 --TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQ------KQIDDRAANGGDPLQAQHDLL--AEKQ 215 (255)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHH------HHHHHHHHHTCCHHHHHHHHH--TTTC
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchh------hhcccccccccchHHHHHHHH--hccC
Confidence 345789999999999999999875 799999999999987321 1110 0000000 00000 0111
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
....+++++|+|++++.++...... ..|++|++.+|..
T Consensus 216 p~~~~~~~~dvA~~~~~l~s~~~~~----------~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 216 PSLAFVTPEHLGELVLFLCSEAGSQ----------VRGAAWNVDGGWL 253 (255)
T ss_dssp TTCCCBCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTGG
T ss_pred CCCCCcCHHHHHHHHHHHhCCccCC----------CCCCEEEECCCcc
Confidence 2235899999999999888754322 3348999988753
No 191
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=99.94 E-value=1.3e-25 Score=208.08 Aligned_cols=240 Identities=10% Similarity=0.037 Sum_probs=163.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... .....++.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (260)
T 2z1n_A 4 GIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIAS-LVSGAQVDIVAGDIREPGDIDRLFEKARD 82 (260)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-cCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999975443332222211 001237899999999999999888743
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 83 ~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~---------- 151 (260)
T 2z1n_A 83 LGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWG-RMVYIGSVTLLRPW---------- 151 (260)
T ss_dssp TTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC----------
T ss_pred hcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEECchhhcCCC----------
Confidence 3799999999754321 22344679999999986666554 445544 99999998877531
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.+...|+.||++.+.+++.++.++ |+++++|+||.|+++.......................+ ........+
T Consensus 152 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~r~ 226 (260)
T 2z1n_A 152 --QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSM---ASRIPMGRV 226 (260)
T ss_dssp --TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------CCTTSSC
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHH---HhcCCCCCc
Confidence 345789999999999999998775 899999999999998543100000000000000000000 011112347
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+++|+|++++.++...... ..|+++++.+|.
T Consensus 227 ~~~~dva~~v~~l~s~~~~~----------~tG~~i~vdGG~ 258 (260)
T 2z1n_A 227 GKPEELASVVAFLASEKASF----------ITGAVIPVDGGA 258 (260)
T ss_dssp CCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTT
T ss_pred cCHHHHHHHHHHHhCccccC----------CCCCEEEeCCCc
Confidence 89999999999998765422 345899998764
No 192
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.94 E-value=5.4e-26 Score=208.94 Aligned_cols=225 Identities=15% Similarity=0.122 Sum_probs=163.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-C
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-A 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~ 154 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+..... . ...++.++.+|++|.++++++++.. +
T Consensus 3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~----~----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (246)
T 2ag5_A 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL----E----KYPGIQTRVLDVTKKKQIDQFANEVER 74 (246)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG----G----GSTTEEEEECCTTCHHHHHHHHHHCSC
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----H----hccCceEEEeeCCCHHHHHHHHHHhCC
Confidence 36789999999999999999999999999999999964322111 1 1137899999999999999887755 6
Q ss_pred ccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|+||||||...... ..++.+..+++|+.|+.++++++. +.+.+ +||++||...+.... .
T Consensus 75 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~~-----------~ 142 (246)
T 2ag5_A 75 LDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG-NIINMSSVASSVKGV-----------V 142 (246)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCSBTTTBCC-----------T
T ss_pred CCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEechHhCcCCC-----------C
Confidence 799999999865321 223345789999999998888764 33443 999999987654210 1
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC----CcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD----MAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
+...|++||++.+.+++.++.++ |+++++||||.|++|..... .........+....+ ...
T Consensus 143 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 210 (246)
T 2ag5_A 143 NRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQK------------TGR 210 (246)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCT------------TSS
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCC------------CCC
Confidence 45789999999999999998775 89999999999998732100 000111122222111 123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 211 ~~~~~dvA~~v~~l~s~~~~~----------~tG~~i~vdgG~ 243 (246)
T 2ag5_A 211 FATAEEIAMLCVYLASDESAY----------VTGNPVIIDGGW 243 (246)
T ss_dssp CEEHHHHHHHHHHHHSGGGTT----------CCSCEEEECTTG
T ss_pred CCCHHHHHHHHHHHhCccccC----------CCCCEEEECCCc
Confidence 788999999999988754432 344899998774
No 193
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=1.5e-25 Score=207.55 Aligned_cols=233 Identities=13% Similarity=0.069 Sum_probs=163.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC-chhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN-YYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
++++|++|||||+|+||++++++|+++|++|+++++... .......... ....++.++.+|++|.++++++++.+
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE---KLGRSALAIKADLTNAAEVEAAISAAA 81 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHH---TTTSCCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH---hcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence 578999999999999999999999999999999955443 2222222221 12357899999999999999998865
Q ss_pred ----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCccc-CCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVY-GVNKKVPFSEKD 222 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vy-g~~~~~~~~e~~ 222 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++..... ..+||++||...+ ..
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------- 151 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG---------- 151 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC----------
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC----------
Confidence 689999999975221 12223367899999999999999876532 2389999998776 31
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
..+...|++||++.+.+++.++.++ ++++++|+||.|.++...... .......+. .......+
T Consensus 152 --~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~-~~~~~~~~~------------~~~p~~r~ 216 (259)
T 3edm_A 152 --GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFT-KPEVRERVA------------GATSLKRE 216 (259)
T ss_dssp --STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------------------CC
T ss_pred --CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCccccccc-ChHHHHHHH------------hcCCCCCC
Confidence 1345789999999999999999886 399999999999887432110 001111111 11223347
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccH
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPV 346 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~ 346 (424)
.+++|+|++++.++...... ..|++|++.+|...+.
T Consensus 217 ~~pedva~~v~~L~s~~~~~----------itG~~i~vdGg~~~~~ 252 (259)
T 3edm_A 217 GSSEDVAGLVAFLASDDAAY----------VTGACYDINGGVLFSE 252 (259)
T ss_dssp BCHHHHHHHHHHHHSGGGTT----------CCSCEEEESBCSSBC-
T ss_pred cCHHHHHHHHHHHcCccccC----------ccCCEEEECCCcCCCC
Confidence 78999999999988765432 4458999998865443
No 194
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=99.94 E-value=3.9e-25 Score=206.11 Aligned_cols=229 Identities=13% Similarity=0.034 Sum_probs=167.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|++|||||+|+||++++++|+++|++|++++++............. ....++.++.+|++|.++++++++.+
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE--QAGGRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--hcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999998765322221111111 12457899999999999999988865
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.... ...+||++||...... +.
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~-----------~~ 174 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELV-----------PW 174 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCC-----------CS
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccC-----------CC
Confidence 6899999999864322 233446799999999999999887652 1248999998544221 11
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|.++....... .........+. ..+..
T Consensus 175 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~------------~r~~~ 239 (271)
T 3v2g_A 175 PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD---HAEAQRERIAT------------GSYGE 239 (271)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS---SHHHHHHTCTT------------SSCBC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch---hHHHHHhcCCC------------CCCCC
Confidence 456789999999999999998875 8999999999999986432211 11222222211 12678
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+|+|++++.++...... ..|+++++.+|.
T Consensus 240 pedvA~~v~fL~s~~~~~----------itG~~i~vdGG~ 269 (271)
T 3v2g_A 240 PQDIAGLVAWLAGPQGKF----------VTGASLTIDGGA 269 (271)
T ss_dssp HHHHHHHHHHHHSGGGTT----------CCSCEEEESTTT
T ss_pred HHHHHHHHHHHhCcccCC----------ccCCEEEeCcCc
Confidence 999999999888655432 445899998874
No 195
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.94 E-value=4.9e-26 Score=211.31 Aligned_cols=226 Identities=16% Similarity=0.154 Sum_probs=168.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+..... ..+ . ..++.++.+|++|.++++++++++
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----~~~-~-~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEA----VAA-L-EAEAIAVVADVSDPKAVEAVFAEALE 76 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHT-C-CSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHH-h-cCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999965332221 111 1 147889999999999999988765
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++..... ..+||++||...++.
T Consensus 77 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------- 143 (263)
T 2a4k_A 77 EFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA------------- 143 (263)
T ss_dssp HHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCCH-------------
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcCC-------------
Confidence 6899999999864321 1223357899999999999998876531 249999999887731
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.+...|+.||.+.+.+++.++.++ |+++++|+||.|.++..... .......+....+. ..+.+
T Consensus 144 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~------------~~~~~ 209 (263)
T 2a4k_A 144 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPL------------GRAGR 209 (263)
T ss_dssp HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTT------------CSCBC
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--CHHHHHHHHhcCCC------------CCCcC
Confidence 234789999999999999998764 89999999999998753321 12222223222211 13788
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
.+|+|++++.++...... ..|+++++.+|..+
T Consensus 210 p~dvA~~v~~l~s~~~~~----------~tG~~i~vdgG~~~ 241 (263)
T 2a4k_A 210 PEEVAQAALFLLSEESAY----------ITGQALYVDGGRSI 241 (263)
T ss_dssp HHHHHHHHHHHHSGGGTT----------CCSCEEEESTTTTT
T ss_pred HHHHHHHHHHHhCccccC----------CcCCEEEECCCccc
Confidence 999999999988764422 34489999887644
No 196
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=99.94 E-value=7.6e-26 Score=208.88 Aligned_cols=228 Identities=15% Similarity=0.078 Sum_probs=161.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+...... .+ . ..++.++.+|++|.++++++++.+
T Consensus 3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~----~~-~-~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (253)
T 1hxh_A 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLA----AE-L-GERSMFVRHDVSSEADWTLVMAAVQR 76 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HH-H-CTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HH-c-CCceEEEEccCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999654322211 11 1 357899999999999999888765
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++.+ .+++.+ ++||++||...+...
T Consensus 77 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~--------- 145 (253)
T 1hxh_A 77 RLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPI--------- 145 (253)
T ss_dssp HHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCC---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCC---------
Confidence 6799999999864321 223346789999998766655 445555 499999998876421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh-----CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY-----GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.+...|++||.+.+.+++.++.++ |+++++||||.|++|...... ............. .....
T Consensus 146 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~--------~~~p~ 213 (253)
T 1hxh_A 146 ---EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL-PKGVSKEMVLHDP--------KLNRA 213 (253)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHS-CTTCCHHHHBCBT--------TTBTT
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhcc-chhhhHHHHhhhh--------ccCcc
Confidence 345789999999999999998763 899999999999987311000 0000000011000 01112
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+.+++|+|++++.++..+... ..|+++++.+|.
T Consensus 214 ~~~~~~~dvA~~~~~l~s~~~~~----------~tG~~~~vdgG~ 248 (253)
T 1hxh_A 214 GRAYMPERIAQLVLFLASDESSV----------MSGSELHADNSI 248 (253)
T ss_dssp CCEECHHHHHHHHHHHHSGGGTT----------CCSCEEEESSSC
T ss_pred CCCCCHHHHHHHHHHHcCccccC----------CCCcEEEECCCc
Confidence 24789999999999998765422 344899998874
No 197
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.94 E-value=3e-25 Score=203.82 Aligned_cols=221 Identities=15% Similarity=0.143 Sum_probs=162.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||++++++|+++|++|++++|+.+.... ...+ . ++.++.+|++|.++++++++++
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~----~~~~-~---~~~~~~~D~~~~~~~~~~~~~~~~~ 74 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLRE----AAEA-V---GAHPVVMDVADPASVERGFAEALAH 74 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHHT-T---TCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHHH-c---CCEEEEecCCCHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999999996432221 1111 1 3789999999999999988764
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.+. +. ++||++||...++.
T Consensus 75 ~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~-g~iv~isS~~~~~~----------- 142 (245)
T 1uls_A 75 LGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNP-GSIVLTASRVYLGN----------- 142 (245)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC-EEEEEECCGGGGCC-----------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CEEEEEccchhcCC-----------
Confidence 5799999999754321 12334578999999999988877543 33 38999999874432
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.+...|+.||.+.+.+++.++.++ |+++++|+||.|.++.... ........+....+. ..+
T Consensus 143 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~p~------------~~~ 206 (245)
T 1uls_A 143 --LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK--VPEKVREKAIAATPL------------GRA 206 (245)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS--SCHHHHHHHHHTCTT------------CSC
T ss_pred --CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh--cCHHHHHHHHhhCCC------------CCC
Confidence 345789999999999999998764 8999999999998875331 111222222222111 127
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.+.+|+|++++.++...... ..|+++++.+|..
T Consensus 207 ~~~~dvA~~v~~l~s~~~~~----------~tG~~~~vdgG~~ 239 (245)
T 1uls_A 207 GKPLEVAYAALFLLSDESSF----------ITGQVLFVDGGRT 239 (245)
T ss_dssp BCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTTT
T ss_pred cCHHHHHHHHHHHhCchhcC----------CcCCEEEECCCcc
Confidence 88999999999988764322 3448999988753
No 198
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=99.94 E-value=1.6e-25 Score=210.86 Aligned_cols=229 Identities=14% Similarity=0.093 Sum_probs=163.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|++|||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 31 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 107 (291)
T 3cxt_A 31 SLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKA---AGINAHGYVCDVTDEDGIQAMVAQIES 107 (291)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999965433322222211 1356889999999999999988764
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+.+ +||++||...+..
T Consensus 108 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iV~isS~~~~~~---------- 176 (291)
T 3cxt_A 108 EVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHG-KIINICSMMSELG---------- 176 (291)
T ss_dssp HTCCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTCC----------
T ss_pred HcCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECccccccC----------
Confidence 5799999999754321 223346799999999988877664 34444 9999999765432
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHH------HHHHHHcCCceeEEecCCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFF------FTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 293 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++.......... +...+....
T Consensus 177 --~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 244 (291)
T 3cxt_A 177 --RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKT---------- 244 (291)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------------CHHHHHHHHHC----------
T ss_pred --CCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCcCcchhhhccchhhhhhhhHHhhhhccC----------
Confidence 1345789999999999999998764 8999999999999885431100000 000000000
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
....+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 245 --p~~r~~~pedvA~~v~~l~s~~~~~----------itG~~i~vdGG~ 281 (291)
T 3cxt_A 245 --PAARWGEAEDLMGPAVFLASDASNF----------VNGHILYVDGGI 281 (291)
T ss_dssp --TTCSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred --CCCCCCCHHHHHHHHHHHhCccccC----------CcCCeEEECCCc
Confidence 0123789999999999988754322 344899998874
No 199
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.94 E-value=7e-26 Score=207.36 Aligned_cols=215 Identities=17% Similarity=0.129 Sum_probs=164.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----C
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----A 154 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----~ 154 (424)
+|+|+||||+|+||++++++|+++|++|++++|+.+ ...+.++.+|++|.++++++++.+ +
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~---------------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 66 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE---------------GEDLIYVEGDVTREEDVRRAVARAQEEAP 66 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC---------------SSSSEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc---------------ccceEEEeCCCCCHHHHHHHHHHHHhhCC
Confidence 578999999999999999999999999999999643 134589999999999999998854 6
Q ss_pred ccEEEEcccccCchhhc----c----ChHHHHHHHHHHHHHHHHHHHhcCC---------CCeEEEecCCcccCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRYAM----Q----NPNSYVESNIAGFVNLLETCKSSDP---------QPAIVWASSSSVYGVNKKVP 217 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~----~----~~~~~~~~N~~g~~~ll~a~~~~~~---------~~~~v~~SS~~vyg~~~~~~ 217 (424)
+|+||||||........ + +.+..+++|+.++.++++++.+... ..+||++||...+...
T Consensus 67 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 142 (242)
T 1uay_A 67 LFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ---- 142 (242)
T ss_dssp EEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC----
T ss_pred ceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC----
Confidence 79999999985432111 1 4567899999999999998865421 1289999998887531
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
.+...|+.||++.+.+++.++.++ |+++++||||.|+++.... ....+...+....+.
T Consensus 143 --------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~~--------- 203 (242)
T 1uay_A 143 --------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG--LPEKAKASLAAQVPF--------- 203 (242)
T ss_dssp --------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT--SCHHHHHHHHTTCCS---------
T ss_pred --------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc--cchhHHHHHHhhCCC---------
Confidence 346789999999999999998775 8999999999999974321 112223333333221
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
...+++++|+|++++.++... . ..|++|++.+|..++
T Consensus 204 --~~~~~~~~dva~~~~~l~~~~-~-----------~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 204 --PPRLGRPEEYAALVLHILENP-M-----------LNGEVVRLDGALRMA 240 (242)
T ss_dssp --SCSCCCHHHHHHHHHHHHHCT-T-----------CCSCEEEESTTCCCC
T ss_pred --cccCCCHHHHHHHHHHHhcCC-C-----------CCCcEEEEcCCeecC
Confidence 023789999999999998762 1 334899999886544
No 200
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=99.94 E-value=4.9e-26 Score=208.86 Aligned_cols=224 Identities=12% Similarity=0.078 Sum_probs=159.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-eCCCCchhhhHHHHHhhhhccCCeEE-EEccCCCHHHHHHHhhcc---
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLLERAGVFV-IDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~v~~-~~~Dl~d~~~v~~~~~~~--- 153 (424)
+|+|+||||+|+||++++++|+++|++|+++ +|+.+........... ...++.+ +.+|++|.++++++++..
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 77 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARR---RGSPLVAVLGANLLEAEAATALVHQAAEV 77 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHH---TTCSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCceEEEEeccCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999998 7764433222221111 1235666 999999999999887753
Q ss_pred --CccEEEEcccccCch----hhccChHHHHHHHHHHHHHH----HHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNL----LETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~l----l~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||..... ...++.+..+++|+.|+.++ ++.+++.+.+ +||++||...+...
T Consensus 78 ~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~-~iv~~sS~~~~~~~---------- 146 (245)
T 2ph3_A 78 LGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFG-RIVNITSVVGILGN---------- 146 (245)
T ss_dssp HTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCTHHHHCC----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCC-EEEEEeChhhccCC----------
Confidence 679999999986432 12234467899999995555 4555555654 99999997654311
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.+...|+.||.+.+.+++.++.++ |+++++||||.++++.... ....+...+....+ ...+
T Consensus 147 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~------------~~~~ 210 (245)
T 2ph3_A 147 --PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER--LPQEVKEAYLKQIP------------AGRF 210 (245)
T ss_dssp --SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--SCHHHHHHHHHTCT------------TCSC
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh--cCHHHHHHHHhcCC------------CCCC
Confidence 345789999999999999998775 8999999999999874321 11122223322211 1248
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
++++|+|++++.++..+... ..|++|++.+|.
T Consensus 211 ~~~~dva~~~~~l~~~~~~~----------~~G~~~~v~gg~ 242 (245)
T 2ph3_A 211 GRPEEVAEAVAFLVSEKAGY----------ITGQTLCVDGGL 242 (245)
T ss_dssp BCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTC
T ss_pred cCHHHHHHHHHHHhCccccc----------ccCCEEEECCCC
Confidence 89999999999998764321 234899998864
No 201
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=99.94 E-value=9.8e-26 Score=207.62 Aligned_cols=226 Identities=12% Similarity=0.058 Sum_probs=159.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC-CchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN-NYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+. +.... ... . ...++.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~--~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (249)
T 2ew8_A 4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIR--N-LGRRVLTVKCDVSQPGDVEAFGKQVI 77 (249)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHH--H-TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHH--h-cCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999976 33222 111 1 1357899999999999999887654
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++.+..+++|+.|+.+++++ +++.+.+ +||++||...+...
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~-------- 148 (249)
T 2ew8_A 78 STFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWG-RIINLTSTTYWLKI-------- 148 (249)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGGSCC--------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCe-EEEEEcchhhccCC--------
Confidence 6799999999864321 2233467899999998877776 5555544 99999998877531
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.+...|++||.+.+.+++.++.++ |+++++|+||.|.++...... .... ...... .. ....
T Consensus 149 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~-~~~~~~--~~--------~~~~ 212 (249)
T 2ew8_A 149 ----EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASA-LSAM-FDVLPN--ML--------QAIP 212 (249)
T ss_dssp ----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------C--TT--------SSSC
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcc-ccch-hhHHHH--hh--------CccC
Confidence 345789999999999999998775 899999999999987432000 0000 000000 00 0112
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 213 ~~~~p~dva~~~~~l~s~~~~~----------~tG~~~~vdGG~ 246 (249)
T 2ew8_A 213 RLQVPLDLTGAAAFLASDDASF----------ITGQTLAVDGGM 246 (249)
T ss_dssp SCCCTHHHHHHHHHHTSGGGTT----------CCSCEEEESSSC
T ss_pred CCCCHHHHHHHHHHHcCcccCC----------CCCcEEEECCCc
Confidence 4789999999999998754322 344899998874
No 202
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=99.94 E-value=7.3e-26 Score=210.43 Aligned_cols=223 Identities=19% Similarity=0.115 Sum_probs=164.2
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+.++++|++|||||+|+||++++++|+++|++|++++|+.+.. .....+.+|++|.+++.++++.+
T Consensus 23 m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~--------------~~~~~~~~Dv~~~~~~~~~~~~~ 88 (266)
T 3uxy_A 23 MQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI--------------AADLHLPGDLREAAYADGLPGAV 88 (266)
T ss_dssp ---CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS--------------CCSEECCCCTTSHHHHHHHHHHH
T ss_pred hhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--------------HhhhccCcCCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999965422 12244578999999998888754
Q ss_pred -----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+..
T Consensus 89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~~~~~-------- 159 (266)
T 3uxy_A 89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGG-AIVNVASCWGLRP-------- 159 (266)
T ss_dssp HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCSBTTBC--------
T ss_pred HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEECCHHhCCC--------
Confidence 6899999999865422 22334678999999999998887 444544 9999999877642
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC-----CCcHHHHHHHHHcCCceeEEecCC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP-----DMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|+++.... ..........+...
T Consensus 160 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~---------- 225 (266)
T 3uxy_A 160 ----GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT---------- 225 (266)
T ss_dssp ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT----------
T ss_pred ----CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc----------
Confidence 1455789999999999999998775 8999999999999873110 00011111222222
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
.....+.+++|+|++++.++...... ..|+++++.+|..++
T Consensus 226 --~p~~r~~~pedvA~~v~~L~s~~~~~----------itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 226 --VPLGRIAEPEDIADVVLFLASDAARY----------LCGSLVEVNGGKAVA 266 (266)
T ss_dssp --STTSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTCCCC
T ss_pred --CCCCCCcCHHHHHHHHHHHhCchhcC----------CcCCEEEECcCEeCC
Confidence 12234789999999999988765432 445899999887543
No 203
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=99.94 E-value=1.6e-25 Score=207.26 Aligned_cols=229 Identities=13% Similarity=0.031 Sum_probs=163.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc--hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY--YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+|+++||||+|+||++++++|+++|++|++++|+.+. .......... ...++.++.+|++|.++++++++.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA---ADQKAVFVGLDVTDKANFDSAIDEAAEK 78 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHT---TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHh---cCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999997543 2222211111 1357899999999999999888754
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.+ .+..++||++||...+..
T Consensus 79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~----------- 147 (258)
T 3a28_C 79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG----------- 147 (258)
T ss_dssp HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-----------
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-----------
Confidence 6799999999864321 2234467899999999988887754 344249999999877542
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC---------CcHHHHHHHHHcCCceeEEecC
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD---------MAYFFFTRDIIRGKRITVYEAP 291 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 291 (424)
..+...|+.||++.+.+++.++.++ |+++++|+||.|.++..... .........+...
T Consensus 148 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 217 (258)
T 3a28_C 148 -FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSS--------- 217 (258)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTT---------
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhc---------
Confidence 1345789999999999999998764 89999999999987621100 0000011111111
Q ss_pred CCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 292 DGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 292 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
.....+.+++|+|++++.++...... ..|+++++.+|..+
T Consensus 218 ---~p~~r~~~p~dvA~~v~~l~s~~~~~----------~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 218 ---IALGRPSVPEDVAGLVSFLASENSNY----------VTGQVMLVDGGMLY 257 (258)
T ss_dssp ---CTTSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESSSSCC
T ss_pred ---CCCCCccCHHHHHHHHHHHhCcccCC----------CCCCEEEECCCEec
Confidence 01123789999999999988765322 34489999887543
No 204
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=99.94 E-value=4e-25 Score=207.14 Aligned_cols=232 Identities=10% Similarity=0.013 Sum_probs=171.0
Q ss_pred CCCCCCCeEEEEcCCCh--hHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 74 PRSTRGLTVLVTGAAGF--VGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
+..+++|+|+||||+|+ ||++++++|+++|++|++++|+. ..+....... ...++.++.+|++|.++++++++
T Consensus 21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~ 95 (280)
T 3nrc_A 21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCA---EFNPAAVLPCDVISDQEIKDLFV 95 (280)
T ss_dssp -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHG---GGCCSEEEECCTTCHHHHHHHHH
T ss_pred ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHH---hcCCceEEEeecCCHHHHHHHHH
Confidence 44678999999999955 99999999999999999999976 2222222222 12458999999999999999988
Q ss_pred cc-----CccEEEEcccccCch---------hhccChHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEecCCcccCCCCC
Q 042406 152 VV-----AFTHVMHLAAQAGVR---------YAMQNPNSYVESNIAGFVNLLETCKSSDP--QPAIVWASSSSVYGVNKK 215 (424)
Q Consensus 152 ~~-----~~d~vi~~Ag~~~~~---------~~~~~~~~~~~~N~~g~~~ll~a~~~~~~--~~~~v~~SS~~vyg~~~~ 215 (424)
.+ ++|+||||||..... ...++.+..+++|+.++.++++++..... ..+||++||.+.+..
T Consensus 96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~--- 172 (280)
T 3nrc_A 96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKA--- 172 (280)
T ss_dssp HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSC---
T ss_pred HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccC---
Confidence 76 689999999986531 22334467899999999999988765311 349999999877642
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCC
Q 042406 216 VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 216 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++..........+........+.
T Consensus 173 ---------~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------- 236 (280)
T 3nrc_A 173 ---------MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL------- 236 (280)
T ss_dssp ---------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT-------
T ss_pred ---------CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC-------
Confidence 1455789999999999999998774 899999999999987543222222333333332221
Q ss_pred CCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
..+..++|+|++++.++...... ..|+++++.+|..+
T Consensus 237 -----~~~~~pedvA~~v~~l~s~~~~~----------~tG~~i~vdgG~~~ 273 (280)
T 3nrc_A 237 -----KKNVDIMEVGNTVAFLCSDMATG----------ITGEVVHVDAGYHC 273 (280)
T ss_dssp -----CSCCCHHHHHHHHHHTTSGGGTT----------CCSCEEEESTTGGG
T ss_pred -----CCCCCHHHHHHHHHHHhCcccCC----------cCCcEEEECCCccc
Confidence 12678999999999988765432 34589999987643
No 205
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=99.94 E-value=1e-25 Score=208.38 Aligned_cols=231 Identities=12% Similarity=0.047 Sum_probs=166.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEe-CCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLD-NFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
....++|+||||||+|+||++++++|+++|++|++++ |+.+........... ...++.++.+|++|.++++++++.
T Consensus 8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~ 84 (256)
T 3ezl_A 8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKA---LGFDFYASEGNVGDWDSTKQAFDK 84 (256)
T ss_dssp -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh---cCCeeEEEecCCCCHHHHHHHHHH
Confidence 4457889999999999999999999999999999998 444433332222221 235789999999999999998886
Q ss_pred c-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
+ ++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+..
T Consensus 85 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~------- 156 (256)
T 3ezl_A 85 VKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWG-RIINISSVNGQKG------- 156 (256)
T ss_dssp HHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCCCGGGS-------
T ss_pred HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEEcchhhccC-------
Confidence 5 6899999999865321 22344679999999987776665 445544 8999999776542
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++.... ..+.....+....+.
T Consensus 157 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~----------- 218 (256)
T 3ezl_A 157 -----QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKA--IRPDVLEKIVATIPV----------- 218 (256)
T ss_dssp -----CSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--SCHHHHHHHHHHSTT-----------
T ss_pred -----CCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccc--cCHHHHHHHHhcCCC-----------
Confidence 1456889999999999999998774 8999999999998863321 112333333332221
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
..+.+++|+|++++.++...... ..|+++++.+|..+
T Consensus 219 -~~~~~~~dva~~~~~l~s~~~~~----------~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 219 -RRLGSPDEIGSIVAWLASEESGF----------STGADFSLNGGLHM 255 (256)
T ss_dssp -SSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTSCC
T ss_pred -CCCcCHHHHHHHHHHHhCCcccC----------CcCcEEEECCCEeC
Confidence 23778999999999888655432 44589999987643
No 206
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=99.94 E-value=4.6e-25 Score=205.06 Aligned_cols=234 Identities=12% Similarity=0.081 Sum_probs=169.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|+.+............ ....++.++.+|++|.++++++++.+
T Consensus 4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR-FPGARLFASVCDVLDALQVRAFAEACE 82 (265)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-STTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-cCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999765544433332221 22345899999999999999988765
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.. .+. .+||++||...+..
T Consensus 83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~--------- 152 (265)
T 3lf2_A 83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRAD-AAIVCVNSLLASQP--------- 152 (265)
T ss_dssp HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTT-EEEEEEEEGGGTSC---------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-eEEEEECCcccCCC---------
Confidence 7899999999864422 2333467899999999999888754 332 38999999777542
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC--------CCcHHHHHHHHHcCCceeEEec
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP--------DMAYFFFTRDIIRGKRITVYEA 290 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ 290 (424)
......|++||.+.+.+++.++.++ |+++++|+||.|.+|.... ......+...+......+
T Consensus 153 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---- 225 (265)
T 3lf2_A 153 ---EPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIP---- 225 (265)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCT----
T ss_pred ---CCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCC----
Confidence 1345789999999999999999875 8999999999998762110 000111111111111111
Q ss_pred CCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 291 PDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 291 ~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+..++|+|++++.++...... ..|+++++.+|.
T Consensus 226 ------~~r~~~pedvA~~v~fL~s~~~~~----------itG~~i~vdGG~ 261 (265)
T 3lf2_A 226 ------LGRLGKPIEAARAILFLASPLSAY----------TTGSHIDVSGGL 261 (265)
T ss_dssp ------TCSCBCHHHHHHHHHHHHSGGGTT----------CCSEEEEESSSC
T ss_pred ------cCCCcCHHHHHHHHHHHhCchhcC----------cCCCEEEECCCC
Confidence 123778999999999988765432 445899998875
No 207
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=99.94 E-value=3.2e-26 Score=210.60 Aligned_cols=224 Identities=14% Similarity=0.131 Sum_probs=165.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||+++++.|+++|++|++++|+.+........ . ..++.++.+|++|.++++++++.+
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~~Dv~~~~~v~~~~~~~~~ 76 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAAS-----I-GKKARAIAADISDPGSVKALFAEIQA 76 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH-----H-CTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-----h-CCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999999999999999975433322211 1 457899999999999999998865
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHH----HHhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLET----CKSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a----~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.+++++ +++.+...+||++||...+...
T Consensus 77 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 147 (247)
T 3rwb_A 77 LTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT--------- 147 (247)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC---------
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC---------
Confidence 6899999999864322 2233467999999999888887 5555533499999997766421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCC--CCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRP--DMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.+...|++||++.+.+++.++.+ .|+++++|+||.|.++.... ......+.... .+ .
T Consensus 148 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~---~~------------~ 209 (247)
T 3rwb_A 148 ---PNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML---QA------------M 209 (247)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH---SS------------S
T ss_pred ---CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc---cc------------c
Confidence 34578999999999999999887 48999999999998763211 00000111100 11 1
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+...+|+|++++.++...... ..|+++++.+|.
T Consensus 210 ~r~~~pedva~~v~~L~s~~~~~----------itG~~i~vdGG~ 244 (247)
T 3rwb_A 210 KGKGQPEHIADVVSFLASDDARW----------ITGQTLNVDAGM 244 (247)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTS
T ss_pred CCCcCHHHHHHHHHHHhCccccC----------CCCCEEEECCCc
Confidence 22567999999999988765432 445899998874
No 208
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=99.94 E-value=5.1e-25 Score=209.99 Aligned_cols=242 Identities=11% Similarity=0.093 Sum_probs=168.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch--------hhhHHHHHhh-hhccCCeEEEEccCCCHH
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY--------ETSLKKARKG-LLERAGVFVIDADINDKS 144 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~ 144 (424)
+.++++|++|||||+|+||+++++.|+++|++|++++|+.+.. .......... .....++.++.+|++|.+
T Consensus 41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~ 120 (317)
T 3oec_A 41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA 120 (317)
T ss_dssp -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence 3457899999999999999999999999999999999863211 1111111111 112457899999999999
Q ss_pred HHHHHhhcc-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccC
Q 042406 145 LLDKIFNVV-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYG 211 (424)
Q Consensus 145 ~v~~~~~~~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg 211 (424)
+++++++.+ ++|+||||||+..... ..++.+..+++|+.|+.++++++.. .+...+||++||...+.
T Consensus 121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~ 200 (317)
T 3oec_A 121 SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR 200 (317)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC
Confidence 999998865 7899999999865322 2334467899999999998887743 33234899999987764
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCc----
Q 042406 212 VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKR---- 284 (424)
Q Consensus 212 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~---- 284 (424)
.. .....|++||++.+.+++.++.++ |+++++|+||.|+++..... .+...+.....
T Consensus 201 ~~------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~~~~~~~~ 264 (317)
T 3oec_A 201 GA------------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE----KLLKMFLPHLENPTR 264 (317)
T ss_dssp CC------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH----HHHHHHCTTCSSCCH
T ss_pred CC------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch----hhhhhhhhhccccch
Confidence 21 345789999999999999999875 89999999999998732110 01111100000
Q ss_pred ---eeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 285 ---ITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 285 ---~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
...+. ........+++++|+|++++.++...... ..|+++++.+|..
T Consensus 265 ~~~~~~~~--~~~~~p~~~~~pedvA~av~fL~s~~a~~----------itG~~i~vdGG~~ 314 (317)
T 3oec_A 265 EDAAELFS--QLTLLPIPWVEPEDVSNAVAWLASDEARY----------IHGAAIPVDGGQL 314 (317)
T ss_dssp HHHHHHHT--TTCSSSSSSBCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTGG
T ss_pred hHHHHHHh--hhccCCCCCCCHHHHHHHHHHHcCCcccC----------CCCCEEEECcchh
Confidence 00000 00111145889999999999888665432 4458999998753
No 209
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=99.94 E-value=1e-25 Score=209.34 Aligned_cols=216 Identities=16% Similarity=0.116 Sum_probs=162.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|++|||||+|+||++++++|+++|++|++++|+.+. ..++.++.+|++|.++++++++.+
T Consensus 5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------------~~~~~~~~~Dl~~~~~v~~~~~~~~~ 70 (264)
T 2dtx_A 5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------------EAKYDHIECDVTNPDQVKASIDHIFK 70 (264)
T ss_dssp GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------------SCSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------------CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999996542 246889999999999999988754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.+ .+. ++||++||...+...
T Consensus 71 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------- 140 (264)
T 2dtx_A 71 EYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRD-PSIVNISSVQASIIT--------- 140 (264)
T ss_dssp HHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS-CEEEEECCGGGTSCC---------
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC-cEEEEECCchhccCC---------
Confidence 6799999999854321 2334567999999998888887754 333 499999998876421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHhC--CcEEEEEeccccCCCCCCCCcH-------H----HHHHHHHcCCceeEEe
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIYG--LSITGLRFFTVYGPWGRPDMAY-------F----FFTRDIIRGKRITVYE 289 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--i~~~~vrp~~v~G~~~~~~~~~-------~----~~~~~~~~~~~~~~~~ 289 (424)
.+...|+.||++.+.+++.++.+++ +++++|+||.+.++.... .. . .....+...
T Consensus 141 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~------- 208 (264)
T 2dtx_A 141 ---KNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRK--AAELEVGSDPMRIEKKISEWGHE------- 208 (264)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHH--HHHHHHCSCHHHHHHHHHHHHHH-------
T ss_pred ---CCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhh--hhhcccccCchhhHHHHHHHHhc-------
Confidence 3457899999999999999998765 999999999998762110 00 0 001111110
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.....+++++|+|++++.++...... ..|+++++.+|.
T Consensus 209 -----~p~~~~~~p~dvA~~v~~l~s~~~~~----------~tG~~i~vdGG~ 246 (264)
T 2dtx_A 209 -----HPMQRIGKPQEVASAVAFLASREASF----------ITGTCLYVDGGL 246 (264)
T ss_dssp -----STTSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred -----CCCCCCcCHHHHHHHHHHHhCchhcC----------CCCcEEEECCCc
Confidence 11234889999999999988764322 344899998874
No 210
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=99.94 E-value=3.9e-25 Score=205.73 Aligned_cols=226 Identities=12% Similarity=0.076 Sum_probs=166.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC-CchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN-NYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.+.+|+|+||||+|+||++++++|+++|++|+++++.. +.......... ....++.++.+|++|.++++++++.+
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~---~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 99 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIV---ANGGNGRLLSFDVANREQCREVLEHEI 99 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---hcCCceEEEEecCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999999998776543 22222222211 12467899999999999999988865
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH-----hcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK-----SSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~-----~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+. .+||++||...+...
T Consensus 100 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-g~iv~isS~~~~~~~------- 171 (267)
T 4iiu_A 100 AQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQG-GRIITLSSVSGVMGN------- 171 (267)
T ss_dssp HHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSC-EEEEEECCHHHHHCC-------
T ss_pred HHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-cEEEEEcchHhccCC-------
Confidence 6899999999865322 233456799999999999988763 3333 499999997665321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.+...|+.||++.+.+++.++.++ |+++++|+||.|.++..... ......+....+.
T Consensus 172 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~------------ 231 (267)
T 4iiu_A 172 -----RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPM------------ 231 (267)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTT------------
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCC------------
Confidence 456789999999999999998775 89999999999999865432 2333444433322
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 232 ~~~~~~edva~~~~~L~s~~~~~----------itG~~i~vdGG~ 266 (267)
T 4iiu_A 232 KRMGQAEEVAGLASYLMSDIAGY----------VTRQVISINGGM 266 (267)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTC
T ss_pred CCCcCHHHHHHHHHHHhCCcccC----------ccCCEEEeCCCc
Confidence 23778999999999988765432 445899998763
No 211
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=99.94 E-value=3.2e-25 Score=204.47 Aligned_cols=213 Identities=10% Similarity=0.047 Sum_probs=150.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+..+......... ..++.++.+|++|.++++++++.+
T Consensus 4 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 4 TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA---GGRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp -CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEECcCCCHHHHHHHHHHHHh
Confidence 467899999999999999999999999999999999877665544433322 457899999999999999998865
Q ss_pred --CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++ ++.+.+ +||++||...+..
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~----------- 148 (252)
T 3h7a_A 81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQG-KIFFTGATASLRG----------- 148 (252)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEEEEGGGTCC-----------
T ss_pred hCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEECCHHHcCC-----------
Confidence 789999999986532 122334678999999998887766 444443 8999999776532
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcE-EEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSI-TGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~-~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
......|++||++.+.+++.++.++ |+++ ++|+||.|.++..... ..... ..+ .......
T Consensus 149 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~------~~~~~-----~~~---~~~~~~~- 212 (252)
T 3h7a_A 149 -GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER------REQMF-----GKD---ALANPDL- 212 (252)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------------
T ss_pred -CCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc------chhhh-----hhh---hhcCCcc-
Confidence 1345789999999999999998775 8999 8999999987743211 00000 000 0111223
Q ss_pred cccHHHHHHHHHHHhhhccc
Q 042406 300 FTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~ 319 (424)
+.+.+|+|++++.++..+..
T Consensus 213 ~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 213 LMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp -CCHHHHHHHHHHHHHCCGG
T ss_pred CCCHHHHHHHHHHHHhCchh
Confidence 88999999999999986553
No 212
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=99.94 E-value=1.1e-25 Score=208.38 Aligned_cols=225 Identities=13% Similarity=0.091 Sum_probs=160.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+++++|++|||||+|+||++++++|+++|++|++++|..+.. ... ...++.++.+|++|.++++++++..
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV-------VAD--LGDRARFAAADVTDEAAVASALDLAE 75 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH-------HHH--TCTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH-------HHh--cCCceEEEECCCCCHHHHHHHHHHHH
Confidence 357889999999999999999999999999999999943211 111 1457899999999999999888754
Q ss_pred ---CccEEEEcccccCch--------hhccChHHHHHHHHHHHHHHHHHHHhcC-----------CCCeEEEecCCcccC
Q 042406 154 ---AFTHVMHLAAQAGVR--------YAMQNPNSYVESNIAGFVNLLETCKSSD-----------PQPAIVWASSSSVYG 211 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~--------~~~~~~~~~~~~N~~g~~~ll~a~~~~~-----------~~~~~v~~SS~~vyg 211 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.... ...+||++||...+.
T Consensus 76 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 155 (257)
T 3tl3_A 76 TMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD 155 (257)
T ss_dssp HHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred HhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence 679999999985432 2233456799999999999988876531 223899999987763
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEE
Q 042406 212 VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVY 288 (424)
Q Consensus 212 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (424)
.. .+...|++||++.+.+++.++.++ |+++++|+||.|.++.... ........+....+.
T Consensus 156 ~~------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~--- 218 (257)
T 3tl3_A 156 GQ------------IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS--LPEEARASLGKQVPH--- 218 (257)
T ss_dssp CH------------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSS---
T ss_pred CC------------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh--ccHHHHHHHHhcCCC---
Confidence 21 234789999999999999998774 8999999999999875432 112222223222211
Q ss_pred ecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 289 EAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 289 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
...+.+++|+|++++.++.... ..|+++++.+|..++
T Consensus 219 --------~~r~~~p~dva~~v~~l~s~~~------------itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 219 --------PSRLGNPDEYGALAVHIIENPM------------LNGEVIRLDGAIRMA 255 (257)
T ss_dssp --------SCSCBCHHHHHHHHHHHHHCTT------------CCSCEEEESTTC---
T ss_pred --------CCCccCHHHHHHHHHHHhcCCC------------CCCCEEEECCCccCC
Confidence 0237889999999999987522 445899999886544
No 213
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=99.94 E-value=3.8e-26 Score=209.21 Aligned_cols=231 Identities=12% Similarity=0.085 Sum_probs=169.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.+++||+++||||+++||+++++.|+++|++|++.+|+.+...+...+... ...++.++++|++|+++++++++.+
T Consensus 5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR---KGYDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH---TTCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 368999999999999999999999999999999999977655554443332 2457899999999999999888766
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|++|||||+..... ..++.+..+++|+.|+..+.+++. +.+...+||++||...+...
T Consensus 82 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~-------- 153 (255)
T 4g81_D 82 AEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR-------- 153 (255)
T ss_dssp HTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC--------
T ss_pred HHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC--------
Confidence 6899999999865432 233446799999999888776553 32223499999997765421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.....|++||.+...+.+.++.++ ||++++|.||.|..|.......-..+...+....|+..
T Consensus 154 ----~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R----------- 218 (255)
T 4g81_D 154 ----PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQR----------- 218 (255)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCS-----------
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCC-----------
Confidence 345789999999999999999875 89999999999987632110000122222333222211
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+...+|+|.+++.++...... ..|+++.|.+|-
T Consensus 219 -~g~pediA~~v~fL~S~~a~~----------iTG~~i~VDGG~ 251 (255)
T 4g81_D 219 -WGRPEELIGTAIFLSSKASDY----------INGQIIYVDGGW 251 (255)
T ss_dssp -CBCGGGGHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred -CcCHHHHHHHHHHHhCchhCC----------CcCCEEEECCCe
Confidence 456789999999888655432 455899998763
No 214
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=99.94 E-value=2.4e-25 Score=207.64 Aligned_cols=230 Identities=12% Similarity=0.055 Sum_probs=166.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++++|+|+||||+|+||++++++|+++|++|++++|+............. ....++.++.+|++|.+++.++++..
T Consensus 24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~ 101 (271)
T 4iin_A 24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELE--EKGYKAAVIKFDAASESDFIEAIQTI 101 (271)
T ss_dssp CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--hcCCceEEEECCCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999965433222222111 12357899999999999999988865
Q ss_pred -----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+.+ +||++||...+..
T Consensus 102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~-------- 172 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFG-SVVNVASIIGERG-------- 172 (271)
T ss_dssp HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHHHHHC--------
T ss_pred HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCC-EEEEEechhhcCC--------
Confidence 6899999999865422 223446789999999988777664 33443 8999999766532
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||.|.++.... +..... ..+ ......
T Consensus 173 ----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~------~~~~~~-----~~~---~~~~~~ 234 (271)
T 4iin_A 173 ----NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNAN------LKDELK-----ADY---VKNIPL 234 (271)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----------------------C---GGGCTT
T ss_pred ----CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhh------hcHHHH-----HHH---HhcCCc
Confidence 145688999999999999999877 48999999999998874321 110000 000 011223
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+.+++|+|++++.++...... ..|+++++.+|-
T Consensus 235 ~~~~~p~dvA~~i~~l~s~~~~~----------itG~~i~vdGG~ 269 (271)
T 4iin_A 235 NRLGSAKEVAEAVAFLLSDHSSY----------ITGETLKVNGGL 269 (271)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTS
T ss_pred CCCcCHHHHHHHHHHHhCCCcCC----------CcCCEEEeCCCe
Confidence 35889999999999998765432 345899998874
No 215
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=99.94 E-value=1.3e-25 Score=205.98 Aligned_cols=225 Identities=13% Similarity=0.033 Sum_probs=161.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-eCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
+|+|+||||+|+||++++++|+++|++|+++ +|+.+........... ...++.++.+|++|.++++++++..
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA---YGGQAITFGGDVSKEADVEAMMKTAIDAW 77 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH---HTCEEEEEECCTTSHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh---cCCcEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999995 6754333222211111 1346889999999999999988754
Q ss_pred -CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.+ .+.+ +||++||...+...
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~~sS~~~~~~~----------- 145 (244)
T 1edo_A 78 GTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKG-RIINIASVVGLIGN----------- 145 (244)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCTHHHHCC-----------
T ss_pred CCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCC-EEEEECChhhcCCC-----------
Confidence 679999999986532 12234467899999999998887755 3443 99999997654321
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.+...|+.||.+.+.+++.++.++ |++++++|||.++++..... ...+...+....+ ...++
T Consensus 146 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~------------~~~~~ 210 (244)
T 1edo_A 146 -IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIP------------LGRTG 210 (244)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCT------------TCSCB
T ss_pred -CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc--ChHHHHHHhhcCC------------CCCCC
Confidence 345789999999999999998774 89999999999998743211 1122222222211 12488
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+++|+|++++.++..+.... ..|++|++.+|.
T Consensus 211 ~~~dva~~~~~l~~~~~~~~---------~~G~~~~v~gG~ 242 (244)
T 1edo_A 211 QPENVAGLVEFLALSPAASY---------ITGQAFTIDGGI 242 (244)
T ss_dssp CHHHHHHHHHHHHHCSGGGG---------CCSCEEEESTTT
T ss_pred CHHHHHHHHHHHhCCCccCC---------cCCCEEEeCCCc
Confidence 99999999999885432211 334899998874
No 216
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=99.94 E-value=2.6e-25 Score=206.94 Aligned_cols=239 Identities=13% Similarity=0.087 Sum_probs=170.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|++|||||+|+||++++++|+++|++|++++|+.+............ .....+.++.+|++|.++++++++..
T Consensus 6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~g 84 (267)
T 3t4x_A 6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ-YPDAILQPVVADLGTEQGCQDVIEKYP 84 (267)
T ss_dssp CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-CTTCEEEEEECCTTSHHHHHHHHHHCC
T ss_pred cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-CCCceEEEEecCCCCHHHHHHHHHhcC
Confidence 3578999999999999999999999999999999999765544433333221 12346789999999999999999876
Q ss_pred CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||....... .++.+..+++|+.|+.++++++ ++.+.+ +||++||...+.. .
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~------------~ 151 (267)
T 3t4x_A 85 KVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEG-RVIFIASEAAIMP------------S 151 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEE-EEEEECCGGGTSC------------C
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-EEEEEcchhhccC------------C
Confidence 68999999998654322 2233567999999977776655 444443 9999999877642 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCC---------CCCcHHHHHHHHHcCCceeEEecCCC
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGR---------PDMAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.+.++... ................. .
T Consensus 152 ~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~ 223 (267)
T 3t4x_A 152 QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR--------P 223 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC--------T
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC--------C
Confidence 456889999999999999999875 699999999999876210 00000111111111000 0
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
......+.+++|+|++++.++...... ..|+++++.+|...+
T Consensus 224 ~~~~~r~~~pedvA~~v~fL~s~~~~~----------itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 224 TSIIQRLIRPEEIAHLVTFLSSPLSSA----------INGSALRIDGGLVRS 265 (267)
T ss_dssp TCSSCSCBCTHHHHHHHHHHHSGGGTT----------CCSCEEEESTTCSCS
T ss_pred cccccCccCHHHHHHHHHHHcCccccC----------ccCCeEEECCCcccc
Confidence 011235889999999999988765432 455899999987554
No 217
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=99.94 E-value=3e-25 Score=207.83 Aligned_cols=229 Identities=15% Similarity=0.041 Sum_probs=167.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+|+||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 107 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKT---YGVHSKAYKCNISDPKSVEETISQQEK 107 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHH---HCSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcceEEEeecCCHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999987654332222111 1357899999999999999988763
Q ss_pred ---CccEEEEcccccCc------hhhccChHHHHHHHHHH----HHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV------RYAMQNPNSYVESNIAG----FVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~------~~~~~~~~~~~~~N~~g----~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||.... ....++.+..+++|+.| +.++++.+++.+.+ +||++||...+...
T Consensus 108 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~-~iv~isS~~~~~~~------- 179 (279)
T 3ctm_A 108 DFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKG-SLIITSSISGKIVN------- 179 (279)
T ss_dssp HHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCCTTSCC--------
T ss_pred HhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-eEEEECchHhccCC-------
Confidence 47999999998644 22223346789999999 55677777776654 99999998765321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
...+...|+.||++.|.+++.++.++ + ++++|+||.+.++..... .......+....+ .
T Consensus 180 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~p------------~ 241 (279)
T 3ctm_A 180 ---IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--SKDMKAKWWQLTP------------L 241 (279)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--CHHHHHHHHHHST------------T
T ss_pred ---CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--ChHHHHHHHHhCC------------c
Confidence 01345789999999999999998874 6 999999999998754311 1122222221111 1
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
..+++++|+|++++.++...... ..|+++++.+|..
T Consensus 242 ~~~~~~~dvA~~~~~l~s~~~~~----------~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 242 GREGLTQELVGGYLYLASNASTF----------TTGSDVVIDGGYT 277 (279)
T ss_dssp CSCBCGGGTHHHHHHHHSGGGTT----------CCSCEEEESTTCC
T ss_pred cCCcCHHHHHHHHHHHhCccccC----------ccCCEEEECCCee
Confidence 23788999999999998765322 3448999998753
No 218
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=99.94 E-value=3.2e-25 Score=207.31 Aligned_cols=227 Identities=11% Similarity=0.048 Sum_probs=163.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|.++++++++.+
T Consensus 26 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 101 (276)
T 2b4q_A 26 SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLS----AYGDCQAIPADLSSEAGARRLAQALGE 101 (276)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHT----TSSCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH----hcCceEEEEeeCCCHHHHHHHHHHHHH
Confidence 4688999999999999999999999999999999997543332222111 1127889999999999999888754
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH----hcCC---CCeEEEecCCcccCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK----SSDP---QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~---~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++. +.+. .++||++||...+...
T Consensus 102 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~------ 175 (276)
T 2b4q_A 102 LSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM------ 175 (276)
T ss_dssp HCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC------
T ss_pred hcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC------
Confidence 679999999975432 1223346799999999987777654 3333 1389999998776431
Q ss_pred CCCCCCCCCC-hHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHc--CCceeEEecCCC
Q 042406 220 EKDRTDQPAS-LYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIR--GKRITVYEAPDG 293 (424)
Q Consensus 220 e~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 293 (424)
.... .|++||++.+.+++.++.++ |+++++|+||.|.++.... ........+.. ..+
T Consensus 176 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~p--------- 238 (276)
T 2b4q_A 176 ------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH--IANDPQALEADSASIP--------- 238 (276)
T ss_dssp ------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH--HHHCHHHHHHHHHTST---------
T ss_pred ------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh--cchhHHHHHHhhcCCC---------
Confidence 2234 89999999999999998774 8999999999999874321 00001111111 111
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 239 ---~~r~~~p~dvA~~v~~l~s~~~~~----------~tG~~i~vdGG~ 274 (276)
T 2b4q_A 239 ---MGRWGRPEEMAALAISLAGTAGAY----------MTGNVIPIDGGF 274 (276)
T ss_dssp ---TSSCCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTT
T ss_pred ---CCCcCCHHHHHHHHHHHhCccccC----------CCCCEEEeCCCc
Confidence 123789999999999998765322 344899998874
No 219
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=99.94 E-value=7.4e-25 Score=205.63 Aligned_cols=231 Identities=11% Similarity=0.026 Sum_probs=166.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhh-HHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
..+++|+++||||+|+||++++++|+++|++|++++|+.+..... ..... ....++.++.+|++|.+++.++++.+
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~ 101 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK---KNGSDAACVKANVGVVEDIVRMFEEA 101 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---HhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence 346889999999999999999999999999999999976432111 11111 12357899999999999998888754
Q ss_pred -----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc--CCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS--DPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~--~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.+. +. .+||++||...+...
T Consensus 102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-g~iv~isS~~~~~~~--------- 171 (283)
T 1g0o_A 102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIG-GRLILMGSITGQAKA--------- 171 (283)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTT-CEEEEECCGGGTCSS---------
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcC-CeEEEEechhhccCC---------
Confidence 6799999999864321 23344678999999999999998876 33 499999997765321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC-------C--CcHHHHHHHHHc--CCceeEE
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP-------D--MAYFFFTRDIIR--GKRITVY 288 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~-------~--~~~~~~~~~~~~--~~~~~~~ 288 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++.... . .........+.. ..+
T Consensus 172 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---- 245 (283)
T 1g0o_A 172 --VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSP---- 245 (283)
T ss_dssp --CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCT----
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCC----
Confidence 0235789999999999999998764 8999999999998862110 0 000111111111 111
Q ss_pred ecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 289 EAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 289 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+.+.+|+|++++.++...... ..|+++++.+|.
T Consensus 246 --------~~r~~~p~dvA~~v~~l~s~~~~~----------itG~~i~vdgG~ 281 (283)
T 1g0o_A 246 --------LRRVGLPIDIARVVCFLASNDGGW----------VTGKVIGIDGGA 281 (283)
T ss_dssp --------TCSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTC
T ss_pred --------CCCCcCHHHHHHHHHHHhCccccC----------cCCCEEEeCCCc
Confidence 123788999999999998765422 344899998874
No 220
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=99.94 E-value=2.1e-25 Score=207.74 Aligned_cols=232 Identities=11% Similarity=-0.001 Sum_probs=166.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|+++++............ ......++.++.+|++|.++++++++.+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 99 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMH--ERDAGRDFKAYAVDVADFESCERCAEKVLA 99 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHH--HHTTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHH--HHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999996443221111111 1113457999999999999999988865
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.. .+.+ +||++||...+..
T Consensus 100 ~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~---------- 168 (269)
T 3gk3_A 100 DFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFG-RIVNIGSVNGSRG---------- 168 (269)
T ss_dssp HHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHHHHHC----------
T ss_pred HcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEeCChhhccC----------
Confidence 6899999999865322 2233467899999999888887643 4433 8999999766532
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++..... ......... ........
T Consensus 169 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~------~~~~~~~~~-------~~~~~~~~ 233 (269)
T 3gk3_A 169 --AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAV------PQDVLEAKI-------LPQIPVGR 233 (269)
T ss_dssp --CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------------CCS-------GGGCTTSS
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhh------chhHHHHHh-------hhcCCcCC
Confidence 1345789999999999999998775 89999999999998754321 011111000 01112234
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
+.+++|+|++++.++...... ..|+++++.+|..++
T Consensus 234 ~~~p~dvA~~v~~L~s~~~~~----------itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 234 LGRPDEVAALIAFLCSDDAGF----------VTGADLAINGGMHMS 269 (269)
T ss_dssp CBCHHHHHHHHHHHTSTTCTT----------CCSCEEEESTTSCCC
T ss_pred ccCHHHHHHHHHHHhCCCcCC----------eeCcEEEECCCEeCc
Confidence 778999999999988765432 445899999986543
No 221
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=99.94 E-value=2.4e-25 Score=212.47 Aligned_cols=229 Identities=16% Similarity=0.063 Sum_probs=154.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|+||||||+||||++++++|+++|++|++++|+.+..+......... .....+.++.+|++|.+++.++++.+
T Consensus 4 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 4 KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE-GSGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp CCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred cCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999766544443333221 12237899999999999999998865
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC---------CCCeEEEecCCcccCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD---------PQPAIVWASSSSVYGVNKKV 216 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~---------~~~~~v~~SS~~vyg~~~~~ 216 (424)
++|+||||||+..... ..++.+..+++|+.|+.++++++.... ...+||++||...+...
T Consensus 83 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~--- 159 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAA--- 159 (319)
T ss_dssp HHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCC---
T ss_pred HhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCC---
Confidence 6899999999854322 223346799999999999888775432 12389999998776531
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCC
Q 042406 217 PFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 217 ~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
.....|++||.+.+.+++.++.++ |+++++|+||.|.++...........+............. .-
T Consensus 160 ---------~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 228 (319)
T 3ioy_A 160 ---------GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVE--RL 228 (319)
T ss_dssp ---------SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------------------------------
T ss_pred ---------CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHH--HH
Confidence 345789999999988888887654 8999999999999875432111111111111000000000 00
Q ss_pred CccccccccHHHHHHHHHHHhhhcc
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
.......++++|+|++++.+++...
T Consensus 229 ~~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 229 AGVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred HHhhhcCCCHHHHHHHHHHHHHcCC
Confidence 1111123899999999999998753
No 222
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=99.93 E-value=7.7e-25 Score=206.05 Aligned_cols=229 Identities=14% Similarity=0.058 Sum_probs=166.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC-CchhhhHHHHHhhhhccCCeEEEEccCCC----HHHHHHH
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN-NYYETSLKKARKGLLERAGVFVIDADIND----KSLLDKI 149 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d----~~~v~~~ 149 (424)
.++++|+++||||+|+||++++++|+++|++|++++|+. +........... ....++.++.+|++| .++++++
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~--~~~~~~~~~~~Dv~~~~~~~~~v~~~ 96 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK--ERSNTAVVCQADLTNSNVLPASCEEI 96 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSCSTTHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh--hcCCceEEEEeecCCccCCHHHHHHH
Confidence 457889999999999999999999999999999999976 443332222211 123578999999999 9999888
Q ss_pred hhcc-----CccEEEEcccccCch--------------hhccChHHHHHHHHHHHHHHHHHHHhcCC---------CCeE
Q 042406 150 FNVV-----AFTHVMHLAAQAGVR--------------YAMQNPNSYVESNIAGFVNLLETCKSSDP---------QPAI 201 (424)
Q Consensus 150 ~~~~-----~~d~vi~~Ag~~~~~--------------~~~~~~~~~~~~N~~g~~~ll~a~~~~~~---------~~~~ 201 (424)
++.+ ++|+||||||..... ...++.+..+++|+.|+.++++++..... ..+|
T Consensus 97 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i 176 (288)
T 2x9g_A 97 INSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI 176 (288)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence 8754 679999999985432 12223457899999999999888754321 2389
Q ss_pred EEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHH
Q 042406 202 VWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRD 278 (424)
Q Consensus 202 v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~ 278 (424)
|++||...+.. ..+...|++||++.+.+++.++.++ |+++++|+||.|+++. . . . ......
T Consensus 177 v~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~-~~~~~~ 240 (288)
T 2x9g_A 177 VNLCDAMVDQP------------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-G-EEEKDK 240 (288)
T ss_dssp EEECCTTTTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-C-HHHHHH
T ss_pred EEEecccccCC------------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-C-hHHHHH
Confidence 99999877642 1345789999999999999998775 8999999999999986 2 1 1 122222
Q ss_pred HHcCCceeEEecCCCCcccccc-ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 279 IIRGKRITVYEAPDGASVARDF-TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~-i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+....+. ..+ ...+|+|++++.++...... ..|+++++.+|..
T Consensus 241 ~~~~~p~------------~r~~~~pedvA~~v~~l~s~~~~~----------itG~~i~vdGG~~ 284 (288)
T 2x9g_A 241 WRRKVPL------------GRREASAEQIADAVIFLVSGSAQY----------ITGSIIKVDGGLS 284 (288)
T ss_dssp HHHTCTT------------TSSCCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGG
T ss_pred HHhhCCC------------CCCCCCHHHHHHHHHHHhCccccC----------ccCCEEEECcchh
Confidence 3222111 114 68999999999998764322 3458999988753
No 223
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=99.93 E-value=3.1e-26 Score=204.73 Aligned_cols=192 Identities=18% Similarity=0.147 Sum_probs=149.0
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc-cCccEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV-VAFTHV 158 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~-~~~d~v 158 (424)
|+++||||+|+||++++++|+++ +|++++|+.+...... .. .. . .++.+|++|.++++++++. .++|+|
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~----~~-~~--~-~~~~~D~~~~~~~~~~~~~~~~id~v 70 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELA----RE-VG--A-RALPADLADELEAKALLEEAGPLDLL 70 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHH----HH-HT--C-EECCCCTTSHHHHHHHHHHHCSEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHH----Hh-cc--C-cEEEeeCCCHHHHHHHHHhcCCCCEE
Confidence 67999999999999999999999 9999999643322211 11 11 2 8899999999999999983 145999
Q ss_pred EEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHH
Q 042406 159 MHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAAT 234 (424)
Q Consensus 159 i~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~s 234 (424)
|||||..... ...++.+..+++|+.++.++++++++.+.+ +||++||...|... .+...|+.+
T Consensus 71 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~iv~~sS~~~~~~~------------~~~~~Y~~s 137 (207)
T 2yut_A 71 VHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGA-RAVFFGAYPRYVQV------------PGFAAYAAA 137 (207)
T ss_dssp EECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEE-EEEEECCCHHHHSS------------TTBHHHHHH
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCc-EEEEEcChhhccCC------------CCcchHHHH
Confidence 9999976432 233445779999999999999999766554 99999998887521 456789999
Q ss_pred HHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 235 KKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 235 K~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
|.+.|.+++.++.+ .|++++++|||.++++... +.+...+.+++++|+|++++
T Consensus 138 K~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~------------------------~~~~~~~~~~~~~dva~~~~ 193 (207)
T 2yut_A 138 KGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA------------------------PLGGPPKGALSPEEAARKVL 193 (207)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG------------------------GGTSCCTTCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc------------------------ccCCCCCCCCCHHHHHHHHH
Confidence 99999999999877 4899999999999987310 01123367999999999999
Q ss_pred HHhhhcc
Q 042406 312 AGLDTAK 318 (424)
Q Consensus 312 ~~~~~~~ 318 (424)
.+++++.
T Consensus 194 ~~~~~~~ 200 (207)
T 2yut_A 194 EGLFREP 200 (207)
T ss_dssp HHHC--C
T ss_pred HHHhCCC
Confidence 9998765
No 224
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=99.93 E-value=9e-26 Score=209.42 Aligned_cols=235 Identities=10% Similarity=0.019 Sum_probs=161.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|.....+........-.....++.++.+|++|.++++++++.+
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999988643322211111111112457899999999999999998865
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.... ...+||++||...+...
T Consensus 87 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~----------- 155 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT----------- 155 (262)
T ss_dssp HHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH-----------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC-----------
Confidence 6899999999865432 223345789999999999999987642 12389999998776531
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.....|++||++.+.+++.++.++ |+++++|+||.|..+..... ........+ ........+.
T Consensus 156 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~----------~~~~~~~~~---~~~~~~~r~~ 221 (262)
T 3ksu_A 156 -GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQ----------ETKESTAFH---KSQAMGNQLT 221 (262)
T ss_dssp -CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTC----------C---------------CCCCSC
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc----------CchHHHHHH---HhcCcccCCC
Confidence 335789999999999999999886 89999999999976521100 000000000 0111223477
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
..+|+|++++.++.. ... ..|+++++.+|....
T Consensus 222 ~pedvA~~v~~L~s~-~~~----------itG~~i~vdGg~~~~ 254 (262)
T 3ksu_A 222 KIEDIAPIIKFLTTD-GWW----------INGQTIFANGGYTTR 254 (262)
T ss_dssp CGGGTHHHHHHHHTT-TTT----------CCSCEEEESTTCCCC
T ss_pred CHHHHHHHHHHHcCC-CCC----------ccCCEEEECCCccCC
Confidence 889999999998876 321 345899999876444
No 225
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=99.93 E-value=2.1e-25 Score=207.91 Aligned_cols=212 Identities=15% Similarity=0.123 Sum_probs=148.5
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+.+|++|||||+|+||++++++|+++|++|++++|+.+......... ..++.++.+|++|.++++++++.+
T Consensus 24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~ 97 (272)
T 4dyv_A 24 SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI------GDDALCVPTDVTDPDSVRALFTATV 97 (272)
T ss_dssp ----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------TSCCEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------CCCeEEEEecCCCHHHHHHHHHHHH
Confidence 3467899999999999999999999999999999999754333222211 257899999999999999998865
Q ss_pred ----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHHh----cCC-CCeEEEecCCcccCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCKS----SDP-QPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~-~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.. .+. ..+||++||...+..
T Consensus 98 ~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~------- 170 (272)
T 4dyv_A 98 EKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSP------- 170 (272)
T ss_dssp HHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSC-------
T ss_pred HHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCC-------
Confidence 789999999985431 12233467999999998887776643 321 238999999877642
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++.... + ..+..... ....
T Consensus 171 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~------~----~~~~~~~~-----~~~~ 230 (272)
T 4dyv_A 171 -----RPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK------M----KAGVPQAD-----LSIK 230 (272)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----------------------------------
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhh------h----cccchhhh-----hccc
Confidence 1456789999999999999998774 8999999999999874321 1 01000000 0111
Q ss_pred ccccccHHHHHHHHHHHhhhccc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
...+.+++|+|++++.++..+..
T Consensus 231 ~~~~~~pedvA~~v~fL~s~~~~ 253 (272)
T 4dyv_A 231 VEPVMDVAHVASAVVYMASLPLD 253 (272)
T ss_dssp -----CHHHHHHHHHHHHHSCTT
T ss_pred ccCCCCHHHHHHHHHHHhCCCCc
Confidence 22378999999999999987764
No 226
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=99.93 E-value=4.9e-25 Score=203.70 Aligned_cols=228 Identities=13% Similarity=0.083 Sum_probs=167.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.+++||++|||||+++||+++++.|+++|++|++.+|+.+..+....+ . ..++.++++|++|+++++++++.+
T Consensus 25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~-----~-g~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE-----I-GGGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----H-CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-----c-CCCeEEEEecCCCHHHHHHHHHHHH
Confidence 358999999999999999999999999999999999976544433222 1 357889999999999999988776
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|++|||||...... ..++.+..+++|+.|+.++.+++..... ..+||++||...+...
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~----------- 167 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT----------- 167 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC-----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC-----------
Confidence 7899999999854422 2334467999999999999888765421 1389999997664321
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC---C--cHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD---M--AYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.....|++||.+...+.+.++.++ ||++++|.||.|..|..... . ....+.+.+...-|+..
T Consensus 168 -~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR--------- 237 (273)
T 4fgs_A 168 -PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGR--------- 237 (273)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSS---------
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCC---------
Confidence 345789999999999999999886 79999999999988743211 0 01123333333333211
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+...+|+|.+++.++...... ..|+++.|.+|.
T Consensus 238 ---~g~peeiA~~v~FLaSd~a~~----------iTG~~i~VDGG~ 270 (273)
T 4fgs_A 238 ---VGRAEEVAAAALFLASDDSSF----------VTGAELFVDGGS 270 (273)
T ss_dssp ---CBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTT
T ss_pred ---CcCHHHHHHHHHHHhCchhcC----------ccCCeEeECcCh
Confidence 556899999999888765533 455899998764
No 227
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=99.93 E-value=2e-24 Score=199.57 Aligned_cols=232 Identities=11% Similarity=-0.021 Sum_probs=170.7
Q ss_pred CCCCCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 75 RSTRGLTVLVTGAAG--FVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 75 ~~~~~~~vlItGg~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
.+++||+++||||+| +||+++++.|+++|++|++.+|+.+..++..... +.....++.++++|++|+++++++++.
T Consensus 2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~--~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLL--EQLNQPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH--GGGTCSSCEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH--HhcCCCcEEEEEccCCCHHHHHHHHHH
Confidence 468999999999876 9999999999999999999999866544433222 223445789999999999999888876
Q ss_pred c-----CccEEEEcccccCchhh-----cc---ChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGVRYA-----MQ---NPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~~~-----~~---~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~ 218 (424)
+ ++|++|||||....... +. +....+++|+.++..+.+++..... ..+||++||.+....
T Consensus 80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~------ 153 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFA------ 153 (256)
T ss_dssp HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSC------
T ss_pred HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccC------
Confidence 5 68999999998653211 11 2235678999998888877765422 238999999665421
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
......|++||.+.+.+++.++.++ ||++++|.||.|-.|..........+.+.+....|+..
T Consensus 154 ------~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R-------- 219 (256)
T 4fs3_A 154 ------VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKR-------- 219 (256)
T ss_dssp ------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSS--------
T ss_pred ------cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCC--------
Confidence 1345789999999999999999775 89999999999988754332223445555554433321
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+...+|+|.+++.++...... ..|+++.|.+|-
T Consensus 220 ----~g~peevA~~v~fL~Sd~a~~----------iTG~~i~VDGG~ 252 (256)
T 4fs3_A 220 ----NVDQVEVGKTAAYLLSDLSSG----------VTGENIHVDSGF 252 (256)
T ss_dssp ----CCCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred ----CcCHHHHHHHHHHHhCchhcC----------ccCCEEEECcCH
Confidence 556899999999888665432 455899988763
No 228
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=99.93 E-value=3.7e-25 Score=205.28 Aligned_cols=212 Identities=16% Similarity=0.145 Sum_probs=152.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+.+|++|||||+|+||+++++.|+++|++|++++|+.+..+........ ....+.++.+|++|.++++++++.+
T Consensus 2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 78 (264)
T 3tfo_A 2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRD---AGGTALAQVLDVTDRHSVAAFAQAAVDT 78 (264)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999976544443332222 2356889999999999999988765
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++. +.+.+ +||++||...+...
T Consensus 79 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~IV~isS~~~~~~~---------- 147 (264)
T 3tfo_A 79 WGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSG-QIINIGSIGALSVV---------- 147 (264)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTCCC----------
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCe-EEEEEcCHHHcccC----------
Confidence 6899999999865322 223346789999999988777654 34443 89999998776421
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh-CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~-~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.....|++||++.+.+++.++.++ |+++++|+||.|.++.... .......... ......+..
T Consensus 148 --~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~----------~~~~~~~~~~-----~~~~~~~~~ 210 (264)
T 3tfo_A 148 --PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGT----------ITHEETMAAM-----DTYRAIALQ 210 (264)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC--------------------------------------CCC
T ss_pred --CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccc----------ccchhHHHHH-----HhhhccCCC
Confidence 345789999999999999998876 8999999999998773321 0000000000 001112578
Q ss_pred HHHHHHHHHHHhhhccc
Q 042406 303 IDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~ 319 (424)
.+|+|++++.++..+..
T Consensus 211 pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 211 PADIARAVRQVIEAPQS 227 (264)
T ss_dssp HHHHHHHHHHHHHSCTT
T ss_pred HHHHHHHHHHHhcCCcc
Confidence 99999999999987754
No 229
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=99.93 E-value=5.9e-25 Score=202.77 Aligned_cols=218 Identities=15% Similarity=0.106 Sum_probs=159.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+.+|+++||||+|+||++++++|+++|++|++++|+.+.. ..+.++.+|++|.++++++++++
T Consensus 17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--------------~~~~~~~~Dl~d~~~v~~~~~~~~ 82 (253)
T 2nm0_A 17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP--------------EGFLAVKCDITDTEQVEQAYKEIE 82 (253)
T ss_dssp ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC--------------TTSEEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh--------------ccceEEEecCCCHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999965421 23789999999999999888764
Q ss_pred ----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.+ .+.+ +||++||...+...
T Consensus 83 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~~~~~~-------- 153 (253)
T 2nm0_A 83 ETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKG-RVVLISSVVGLLGS-------- 153 (253)
T ss_dssp HHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEEECCCCCCCCH--------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-EEEEECchhhCCCC--------
Confidence 579999999985432 23456678999999999988886643 3443 99999997665311
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
.+...|++||.+.+.+++.++.++ |+++++|+||.|.++.... ........+....+ ..
T Consensus 154 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~--~~~~~~~~~~~~~p------------~~ 215 (253)
T 2nm0_A 154 ----AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV--LTDEQRANIVSQVP------------LG 215 (253)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCT------------TC
T ss_pred ----CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh--cCHHHHHHHHhcCC------------CC
Confidence 234689999999999999998775 7999999999998764321 00001111111111 12
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
.+++.+|+|++++.++..+... ..|+++.+.+|..
T Consensus 216 ~~~~p~dvA~~i~~l~s~~~~~----------~tG~~i~vdGG~~ 250 (253)
T 2nm0_A 216 RYARPEEIAATVRFLASDDASY----------ITGAVIPVDGGLG 250 (253)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTTT
T ss_pred CCcCHHHHHHHHHHHhCccccC----------CcCcEEEECCccc
Confidence 3789999999999988765422 3448999988754
No 230
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=99.93 E-value=9e-25 Score=202.00 Aligned_cols=231 Identities=14% Similarity=0.089 Sum_probs=161.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++.+|++|.++++++++.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ---AGGHAVAVKVDVSDRDQVFAAVEQARKTLG 78 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 57899999999999999999999999999999975443332222211 1346889999999999999988754
Q ss_pred CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.+ .+..++||++||...+...
T Consensus 79 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 146 (256)
T 1geg_A 79 GFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN------------ 146 (256)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC------------
Confidence 6799999999754321 2233457899999999887776643 3312389999997665321
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHc-----CCc-eeEEecCCCCcc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIR-----GKR-ITVYEAPDGASV 296 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~ 296 (424)
.+...|++||.+.+.+++.++.++ |+++++|+||.|.++... .+...+.. ... ...+. ....
T Consensus 147 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~------~~~~~~~~~~~~~~~~~~~~~~---~~~p 217 (256)
T 1geg_A 147 PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWA------EIDRQVSEAAGKPLGYGTAEFA---KRIT 217 (256)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHH------HHHHHHHHHHTCCTTHHHHHHH---TTCT
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhh------hhhhhccccccCChHHHHHHHH---hcCC
Confidence 345789999999999999998764 899999999999986311 11000000 000 00000 0011
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
...+.+.+|+|++++.++...... ..|+++++.+|..
T Consensus 218 ~~r~~~p~dvA~~v~~l~s~~~~~----------~tG~~i~vdGG~~ 254 (256)
T 1geg_A 218 LGRLSEPEDVAACVSYLASPDSDY----------MTGQSLLIDGGMV 254 (256)
T ss_dssp TCSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESSSSS
T ss_pred CCCCcCHHHHHHHHHHHhCccccC----------CCCCEEEeCCCcc
Confidence 123789999999999988765322 3448999988753
No 231
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=99.93 E-value=9.6e-25 Score=208.98 Aligned_cols=230 Identities=10% Similarity=-0.030 Sum_probs=166.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEe-CCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH----------
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLD-NFNNYYETSLKKARKGLLERAGVFVIDADINDKS---------- 144 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---------- 144 (424)
.+++|++|||||+|+||+++++.|+++|++|++++ |+.+........... ....++.++.+|++|.+
T Consensus 43 ~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 120 (328)
T 2qhx_A 43 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGADGS 120 (328)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCC-------
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh--hcCCeEEEEEeeCCCchhccccccccc
Confidence 47889999999999999999999999999999999 865443332222211 12357899999999999
Q ss_pred -------HHHHHhhcc-----CccEEEEcccccCchh----h--------------ccChHHHHHHHHHHHHHHHHHHHh
Q 042406 145 -------LLDKIFNVV-----AFTHVMHLAAQAGVRY----A--------------MQNPNSYVESNIAGFVNLLETCKS 194 (424)
Q Consensus 145 -------~v~~~~~~~-----~~d~vi~~Ag~~~~~~----~--------------~~~~~~~~~~N~~g~~~ll~a~~~ 194 (424)
+++++++.+ ++|+||||||...... . .++.+..+++|+.|+.++++++..
T Consensus 121 ~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 200 (328)
T 2qhx_A 121 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH 200 (328)
T ss_dssp CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888765 6899999999854321 1 233457899999999888887653
Q ss_pred ----cCC-----CCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEecccc
Q 042406 195 ----SDP-----QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVY 262 (424)
Q Consensus 195 ----~~~-----~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~ 262 (424)
.+. ..+||++||...+.. ..+...|++||++.+.+++.++.++ |+++++|+||.|.
T Consensus 201 ~m~~~~~~~~~~~g~IV~isS~~~~~~------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~ 268 (328)
T 2qhx_A 201 RVAGTPAKHRGTNYSIINMVDAMTNQP------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSV 268 (328)
T ss_dssp HHHHSCGGGSCSCEEEEEECCTTTTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBS
T ss_pred HHHhcCCcCCCCCcEEEEECchhhccC------------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccc
Confidence 330 238999999877642 1345789999999999999998875 8999999999999
Q ss_pred CCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 263 GPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 263 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
++. . . . +.....+....++ . .-+...+|+|++++.++...... ..|+++++.+|.
T Consensus 269 T~~-~-~-~-~~~~~~~~~~~p~-------~----~r~~~pedvA~~v~~l~s~~~~~----------itG~~i~vdGG~ 323 (328)
T 2qhx_A 269 LVD-D-M-P-PAVWEGHRSKVPL-------Y----QRDSSAAEVSDVVIFLCSSKAKY----------ITGTCVKVDGGY 323 (328)
T ss_dssp CCC-C-S-C-HHHHHHHHTTCTT-------T----TSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTG
T ss_pred CCc-c-c-c-HHHHHHHHhhCCC-------C----CCCCCHHHHHHHHHHHhCccccC----------ccCcEEEECCCc
Confidence 986 2 1 1 2333333322211 0 02678999999999998754322 345899998875
Q ss_pred cc
Q 042406 343 PV 344 (424)
Q Consensus 343 ~~ 344 (424)
.+
T Consensus 324 ~~ 325 (328)
T 2qhx_A 324 SL 325 (328)
T ss_dssp GG
T ss_pred cc
Confidence 43
No 232
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=99.93 E-value=1.2e-24 Score=200.16 Aligned_cols=215 Identities=16% Similarity=0.131 Sum_probs=159.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|++|||||+|+||++++++|+++|++|++++|+.+.... ... ...++.++++|++|.++++++++.+
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~----~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 74 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSAD----FAK---ERPNLFYFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HHT---TCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHH---hcccCCeEEeeCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999996432211 111 2246779999999999999988864
Q ss_pred CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS---DPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++... + ..+||++||...+... .
T Consensus 75 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~------------~ 141 (247)
T 3dii_A 75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSE------------P 141 (247)
T ss_dssp CCCEEEECCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCC------------T
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEcchhhcCCC------------C
Confidence 6899999999865422 22344678999999999998887653 2 2499999998876531 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYID 304 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 304 (424)
+...|++||++.+.+++.++.++ ++++++|+||.|.++..... ........+ ...+..++
T Consensus 142 ~~~~Y~asKaa~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~------~~~~~~~~p------------~~r~~~p~ 203 (247)
T 3dii_A 142 DSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF------TQEDCAAIP------------AGKVGTPK 203 (247)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C------CHHHHHTST------------TSSCBCHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEEeCccCCcchhhH------HHHHHhcCC------------CCCCcCHH
Confidence 45789999999999999999876 49999999999988744321 111222211 12377899
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 305 Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
|+|++++.++.... ..|+.+++.+|..
T Consensus 204 dva~~v~~l~~~~~------------itG~~i~vdGG~~ 230 (247)
T 3dii_A 204 DISNMVLFLCQQDF------------ITGETIIVDGGMS 230 (247)
T ss_dssp HHHHHHHHHHTCSS------------CCSCEEEESTTGG
T ss_pred HHHHHHHHHHcCCC------------CCCcEEEECCCcc
Confidence 99999999884321 3458999987753
No 233
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.5e-25 Score=203.22 Aligned_cols=224 Identities=13% Similarity=0.042 Sum_probs=162.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+|+++||||+|+||++++++|+++| +.|++.+|+.+....... . . ..++.++.+|++|.++++++++.+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~----~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 75 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKE----K-Y-GDRFFYVVGDITEDSVLKQLVNAAVKG 75 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHH----H-H-GGGEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHH----H-h-CCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 5899999999999999999999985 788889986543322211 1 1 357899999999999999998865
Q ss_pred --CccEEEEcccccCc-h----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGV-R----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~-~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||.... . ...++.+..+++|+.|+.++++++ ++.+ .+||++||...+..
T Consensus 76 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~---------- 143 (254)
T 3kzv_A 76 HGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMY---------- 143 (254)
T ss_dssp HSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCS----------
T ss_pred cCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccC----------
Confidence 78999999998543 1 122334679999999999988877 4444 39999999877642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh-CCcEEEEEeccccCCCCCCC-------CcHHHHHHHHHcCCceeEEecCCCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLRFFTVYGPWGRPD-------MAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~i~~~~vrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
..+...|++||++.+.+++.++.++ ++++++|+||.|.++..... .........+....+
T Consensus 144 --~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 211 (254)
T 3kzv_A 144 --FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKE---------- 211 (254)
T ss_dssp --SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHT----------
T ss_pred --CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHh----------
Confidence 1456789999999999999999876 89999999999998754321 001222222222111
Q ss_pred ccccccccHHHHHHHHHHHhhhcc-ccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAK-KSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
...+.+.+|+|++++.++.... .. ..|+.+++.+++..
T Consensus 212 --~~r~~~p~dva~~v~~L~s~~~~~~----------itG~~i~vdg~~~~ 250 (254)
T 3kzv_A 212 --NNQLLDSSVPATVYAKLALHGIPDG----------VNGQYLSYNDPALA 250 (254)
T ss_dssp --TC----CHHHHHHHHHHHHHCCCGG----------GTTCEEETTCGGGG
T ss_pred --cCCcCCcccHHHHHHHHHhhcccCC----------CCccEEEecCcccc
Confidence 1236778999999999887662 32 34489999887643
No 234
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=99.93 E-value=1.1e-24 Score=202.19 Aligned_cols=207 Identities=14% Similarity=0.039 Sum_probs=152.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+..+++|+||||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++.+
T Consensus 24 m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 24 MSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA---AGGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH---hCCceeEEEecCCCHHHHHHHHHHH
Confidence 4457899999999999999999999999999999999976544333322221 2357899999999999999988875
Q ss_pred -----CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++.. .+.+ +||++||...+..
T Consensus 101 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~------- 172 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRG-HIINISSLAGKNP------- 172 (262)
T ss_dssp HHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCC-EEEEECSSCSSCC-------
T ss_pred HHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc-eEEEEechhhcCC-------
Confidence 68999999997321 112333467999999999888887643 4443 9999999877642
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
..+...|+.||++.+.+++.++.+ .|+++++|+||.|.++.... ... ...
T Consensus 173 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----------~~~------------~~~ 225 (262)
T 3rkr_A 173 -----VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG----------LSA------------KKS 225 (262)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------------
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccc----------ccc------------ccc
Confidence 145678999999999999999877 48999999999998763221 000 011
Q ss_pred ccccccHHHHHHHHHHHhhhcc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
...++..+|+|++++.++....
T Consensus 226 ~~~~~~p~dvA~~v~~l~s~~~ 247 (262)
T 3rkr_A 226 ALGAIEPDDIADVVALLATQAD 247 (262)
T ss_dssp ---CCCHHHHHHHHHHHHTCCT
T ss_pred cccCCCHHHHHHHHHHHhcCcc
Confidence 2236789999999999987755
No 235
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=99.93 E-value=2.1e-25 Score=202.37 Aligned_cols=228 Identities=14% Similarity=0.089 Sum_probs=168.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
.+++||+++||||+++||+++++.|+++|++|++.+|+... +....... ...++.++.+|++|+++++++++..+
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~--~~~~~~~~---~g~~~~~~~~Dv~d~~~v~~~~~~g~ 79 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD--ETLDIIAK---DGGNASALLIDFADPLAAKDSFTDAG 79 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHH---TTCCEEEEECCTTSTTTTTTSSTTTC
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH--HHHHHHHH---hCCcEEEEEccCCCHHHHHHHHHhCC
Confidence 46899999999999999999999999999999999997542 22222221 24578999999999999999888778
Q ss_pred ccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
+|++|||||+..... ..++.+..+++|+.|+..+.+++ ++.+...+||++||...+... .
T Consensus 80 iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~------------~ 147 (247)
T 4hp8_A 80 FDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG------------I 147 (247)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------S
T ss_pred CCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC------------C
Confidence 999999999865422 23345679999999988877764 333433489999997664321 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
....|++||.+...+.+.++.++ ||++++|.||.|..|.......-....+.+...-|+.. +-..
T Consensus 148 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR------------~g~p 215 (247)
T 4hp8_A 148 RVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGR------------WGHS 215 (247)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSS------------CBCT
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCC------------CcCH
Confidence 45789999999999999999875 89999999999987632110000122333444333222 4557
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
+|+|.+++.++...... ..|+++.|.+|
T Consensus 216 eeiA~~v~fLaSd~a~~----------iTG~~i~VDGG 243 (247)
T 4hp8_A 216 EDIAGAAVFLSSAAADY----------VHGAILNVDGG 243 (247)
T ss_dssp HHHHHHHHHHTSGGGTT----------CCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcC----------CcCCeEEECcc
Confidence 99999999888665433 45589999876
No 236
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=99.93 E-value=6.1e-25 Score=204.21 Aligned_cols=210 Identities=15% Similarity=0.123 Sum_probs=155.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+.+|++|||||+|+||++++++|+++|++|++++|+.+. .+.....++.++.+|++|.++++++++.+
T Consensus 13 ~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 83 (266)
T 3p19_A 13 GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVER---------LKALNLPNTLCAQVDVTDKYTFDTAITRAEK 83 (266)
T ss_dssp --CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHH---------HHTTCCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH---------HHHhhcCCceEEEecCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999995322 11223347899999999999999988855
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+..
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g-~IV~isS~~~~~~---------- 152 (266)
T 3p19_A 84 IYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCG-TIINISSIAGKKT---------- 152 (266)
T ss_dssp HHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCGGGTSC----------
T ss_pred HCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEEcChhhCCC----------
Confidence 6799999999864322 22234578999999998866655 455544 9999999877642
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++....... .......... .. ....
T Consensus 153 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~-~~----------~~~r 218 (266)
T 3p19_A 153 --FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS-QQIKDGYDAW-RV----------DMGG 218 (266)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC-HHHHHHHHHH-HH----------HTTC
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc-hhhhHHHHhh-cc----------cccC
Confidence 1345789999999999999998774 8999999999999875322110 1111111100 00 1123
Q ss_pred cccHHHHHHHHHHHhhhccc
Q 042406 300 FTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~ 319 (424)
+++++|+|++++.++..+..
T Consensus 219 ~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 219 VLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp CBCHHHHHHHHHHHHHSCTT
T ss_pred CCCHHHHHHHHHHHHcCCCC
Confidence 78899999999999987653
No 237
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=99.93 E-value=1.1e-24 Score=202.57 Aligned_cols=229 Identities=13% Similarity=0.060 Sum_probs=160.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
..++|++|||||+|+||++++++|+++|++|++.++......+....... ....++.++.+|++|.++++++++.+
T Consensus 24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 101 (267)
T 3u5t_A 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE--AAGGKALTAQADVSDPAAVRRLFATAEE 101 (267)
T ss_dssp ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHH--hcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999986654432222211111 12357899999999999999998865
Q ss_pred ---CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||+...... .++.+..+++|+.|+.++++++..... ..+||++||...+...
T Consensus 102 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------------ 169 (267)
T 3u5t_A 102 AFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH------------ 169 (267)
T ss_dssp HHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC------------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC------------
Confidence 68999999998654322 222356889999999999988765421 2389999997765421
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.....|++||++.+.+++.++.++ |+++++|+||.|.++..... ........+.... ....+..
T Consensus 170 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~------------p~~r~~~ 236 (267)
T 3u5t_A 170 PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEG-KSDEVRDRFAKLA------------PLERLGT 236 (267)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSS------------TTCSCBC
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCcccccc-CCHHHHHHHHhcC------------CCCCCcC
Confidence 345789999999999999999885 89999999999988743210 0011112222221 1224778
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
++|+|++++.++...... ..|+++++.+|
T Consensus 237 pedvA~~v~~L~s~~~~~----------itG~~i~vdGG 265 (267)
T 3u5t_A 237 PQDIAGAVAFLAGPDGAW----------VNGQVLRANGG 265 (267)
T ss_dssp HHHHHHHHHHHHSTTTTT----------CCSEEEEESSS
T ss_pred HHHHHHHHHHHhCccccC----------ccCCEEEeCCC
Confidence 999999999988755432 44589999876
No 238
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=99.93 E-value=9.9e-25 Score=200.12 Aligned_cols=201 Identities=15% Similarity=0.139 Sum_probs=153.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-------GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
+|+|+||||+|+||++++++|+++|+ +|++++|+.+........... ...++.++.+|++|.++++++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~ 78 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA---EGALTDTITADISDMADVRRLTT 78 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT---TTCEEEEEECCTTSHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc---cCCeeeEEEecCCCHHHHHHHHH
Confidence 57899999999999999999999999 999999965433222211111 13468999999999999998887
Q ss_pred cc-----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCC
Q 042406 152 VV-----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 152 ~~-----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
.+ ++|+||||||..... ...++.+..+++|+.|+.++++++.. .+.+ +||++||...+..
T Consensus 79 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~iv~isS~~~~~~------ 151 (244)
T 2bd0_A 79 HIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSG-HIFFITSVAATKA------ 151 (244)
T ss_dssp HHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSC------
T ss_pred HHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCC-EEEEEecchhcCC------
Confidence 53 579999999986432 12234567899999999998888743 3443 9999999888752
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
..+...|+.||++.+.+++.++.+ .|+++++||||.|++|...... . ..
T Consensus 152 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~---------~~- 203 (244)
T 2bd0_A 152 ------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVD------------D---------EM- 203 (244)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCC------------S---------TT-
T ss_pred ------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhcc------------c---------cc-
Confidence 144578999999999999988765 4899999999999998543210 0 00
Q ss_pred cccccccHHHHHHHHHHHhhhcc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
...+++++|+|++++.++..+.
T Consensus 204 -~~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 204 -QALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp -GGGSBCHHHHHHHHHHHHTSCT
T ss_pred -cccCCCHHHHHHHHHHHHhCCc
Confidence 1258999999999999997654
No 239
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=99.93 E-value=7.8e-26 Score=210.46 Aligned_cols=239 Identities=15% Similarity=0.093 Sum_probs=164.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... .....++.++.+|++|.++++++++.+
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHE-QFEPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT-TSCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh-hcCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999965433222211111 111346889999999999999988765
Q ss_pred ---CccEEEEcccccCchhhccChHHHHHHHHHHHHH----HHHHHHhcC--CCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVN----LLETCKSSD--PQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~----ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||... .++.+..+++|+.++.+ +++.+++.+ ..++||++||...+...
T Consensus 83 ~~g~id~lv~~Ag~~~----~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------- 147 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNN----EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV----------- 147 (267)
T ss_dssp HHSCCCEEEECCCCCC----SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----------
T ss_pred HcCCCCEEEECCCCCC----hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC-----------
Confidence 6799999999753 35678899999997654 455555543 12489999998877531
Q ss_pred CCCCChHHHHHHHHHHHHHHHH--HH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYN--HI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~--~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|+.||.+.+.+++.++ .+ .|+++++|+||.|.++.... ...... . +.................
T Consensus 148 -~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~----~-~~~~~~~~~~~~~~~~~~ 220 (267)
T 2gdz_A 148 -AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILES-IEKEEN----M-GQYIEYKDHIKDMIKYYG 220 (267)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHG-GGCHHH----H-GGGGGGHHHHHHHHHHHC
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhc-cccccc----c-chhhhHHHHHHHHhcccc
Confidence 345689999999999999852 32 48999999999998762110 000000 0 000000000000011234
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHH
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRL 349 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el 349 (424)
+++++|+|++++.++.... ..|++|++.+++.+++.|+
T Consensus 221 ~~~~~dvA~~v~~l~s~~~------------~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 221 ILDPPLIANGLITLIEDDA------------LNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp CBCHHHHHHHHHHHHHCTT------------CSSCEEEEETTTEEEECCC
T ss_pred CCCHHHHHHHHHHHhcCcC------------CCCcEEEecCCCcccccCc
Confidence 7899999999999987643 3348999999887776553
No 240
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=99.93 E-value=3e-24 Score=198.19 Aligned_cols=230 Identities=13% Similarity=0.096 Sum_probs=167.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCC-CCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNF-NNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
++++|+++||||+|+||++++++|+++|++|+++++. .+........... ....+.++.+|++|.++++++++..
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQS---NGGSAFSIGANLESLHGVEALYSSLD 80 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHH---TTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh---cCCceEEEecCcCCHHHHHHHHHHHH
Confidence 4678999999999999999999999999999987544 3333222222221 2457889999999999988887754
Q ss_pred ----------CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCC
Q 042406 154 ----------AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 154 ----------~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
++|+||||||....... .++.+..+++|+.|+.++++++.... ...+||++||...+...
T Consensus 81 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~----- 155 (255)
T 3icc_A 81 NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL----- 155 (255)
T ss_dssp HHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC-----
T ss_pred HHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC-----
Confidence 27999999998644322 22335689999999999999987652 11389999998776421
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
.....|++||++.+.+++.++.++ |+++++|+||.|.++..........+........+
T Consensus 156 -------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~----------- 217 (255)
T 3icc_A 156 -------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISA----------- 217 (255)
T ss_dssp -------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTST-----------
T ss_pred -------CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCC-----------
Confidence 345789999999999999998775 89999999999998754322111122222222221
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 218 -~~~~~~~~dva~~~~~l~s~~~~~----------~tG~~i~vdgG~ 253 (255)
T 3icc_A 218 -FNRLGEVEDIADTAAFLASPDSRW----------VTGQLIDVSGGS 253 (255)
T ss_dssp -TSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESSST
T ss_pred -cCCCCCHHHHHHHHHHHhCcccCC----------ccCCEEEecCCe
Confidence 223778999999999888655432 445899998875
No 241
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=99.93 E-value=3e-25 Score=204.46 Aligned_cols=209 Identities=18% Similarity=0.131 Sum_probs=155.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|++|||||+|+||++++++|+++|++|++++|+.+..+..............++.++.+|++|.++++++++.+
T Consensus 4 ~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 4 EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp -CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999766554443333222112267899999999999999988765
Q ss_pred ---CccEEEEcccccCchh---hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY---AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~---~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+..
T Consensus 84 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~----------- 151 (250)
T 3nyw_A 84 KYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNG-YIFNVASRAAKYG----------- 151 (250)
T ss_dssp HHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECC-----------------
T ss_pred hcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EEEEEccHHhcCC-----------
Confidence 6899999999854321 22334679999999998888876 334443 8999999766431
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++ +.... ... .....+
T Consensus 152 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~----------~~~~~--~~~----------~~~~~~ 208 (250)
T 3nyw_A 152 -FADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTD----------MAKKA--GTP----------FKDEEM 208 (250)
T ss_dssp --CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSH----------HHHHT--TCC----------SCGGGS
T ss_pred -CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCc----------hhhhc--CCC----------cccccC
Confidence 1346889999999999999998875 899999999999775 21111 111 112348
Q ss_pred ccHHHHHHHHHHHhhhccc
Q 042406 301 TYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~ 319 (424)
++.+|+|++++.++..+..
T Consensus 209 ~~p~dva~~v~~l~s~~~~ 227 (250)
T 3nyw_A 209 IQPDDLLNTIRCLLNLSEN 227 (250)
T ss_dssp BCHHHHHHHHHHHHTSCTT
T ss_pred CCHHHHHHHHHHHHcCCCc
Confidence 8999999999999986653
No 242
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=99.93 E-value=7.1e-25 Score=202.41 Aligned_cols=219 Identities=14% Similarity=0.103 Sum_probs=160.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCH-HHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDG-VLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDK-SLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~v~~~~~~~ 153 (424)
++++|+++||||+|+||++++++|+++|++ |++++|+.+. ........ .....++.++.+|++|. ++++++++.+
T Consensus 2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T 1sby_A 2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKA-INPKVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHH-HCTTSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHH-hCCCceEEEEEEecCCChHHHHHHHHHH
Confidence 367899999999999999999999999997 9999997642 11121211 11234689999999998 8888888754
Q ss_pred -----CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCC------CCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDP------QPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~------~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||... .++.+..+++|+.|+.++++++..... ..+||++||...+...
T Consensus 79 ~~~~g~id~lv~~Ag~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 145 (254)
T 1sby_A 79 FDQLKTVDILINGAGILD----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI--------- 145 (254)
T ss_dssp HHHHSCCCEEEECCCCCC----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---------
T ss_pred HHhcCCCCEEEECCccCC----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC---------
Confidence 6799999999753 456789999999999999888764321 2379999998887531
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCC-cH--HHHHHHHHcCCceeEEecCCCCcc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDM-AY--FFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
.+...|+.||++.+.+++.++.+ .|+++++|+||.|.++...... .. ..........
T Consensus 146 ---~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-------------- 208 (254)
T 1sby_A 146 ---HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLS-------------- 208 (254)
T ss_dssp ---TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTT--------------
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhc--------------
Confidence 34578999999999999998876 5899999999999987321100 00 0000111111
Q ss_pred ccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
..+.+++|+|++++.+++.. ..|++|++.+|
T Consensus 209 -~~~~~~~dvA~~i~~~~~~~-------------~~G~~~~v~gG 239 (254)
T 1sby_A 209 -HPTQTSEQCGQNFVKAIEAN-------------KNGAIWKLDLG 239 (254)
T ss_dssp -SCCEEHHHHHHHHHHHHHHC-------------CTTCEEEEETT
T ss_pred -CCCCCHHHHHHHHHHHHHcC-------------CCCCEEEEeCC
Confidence 12347999999999888632 22389999887
No 243
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=99.93 E-value=1.7e-25 Score=208.92 Aligned_cols=228 Identities=14% Similarity=0.036 Sum_probs=167.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++..
T Consensus 30 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 106 (275)
T 4imr_A 30 GLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA---SGGTAQELAGDLSEAGAGTDLIERAEA 106 (275)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH---TTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh---cCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999999999999987765554443322 2467899999999999998888754
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+..
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~Iv~isS~~~~~~----------- 174 (275)
T 4imr_A 107 IAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWG-RVVSIGSINQLRP----------- 174 (275)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSC-----------
T ss_pred hCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-EEEEECCHHhCCC-----------
Confidence 6899999999754322 22334678999999999988876 334443 9999999877641
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC-cHHHHHHHHHcCC-ceeEEecCCCCcccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM-AYFFFTRDIIRGK-RITVYEAPDGASVAR 298 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 298 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++...... ..+.....+.... + ..
T Consensus 175 -~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------------~~ 241 (275)
T 4imr_A 175 -KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNW------------MG 241 (275)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHST------------TC
T ss_pred -CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCc------------cC
Confidence 1345679999999999999998875 899999999999876211000 0001111111111 1 11
Q ss_pred ccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 299 DFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
-+...+|+|++++.++...... ..|+++++.+|
T Consensus 242 r~~~pedvA~~v~fL~s~~a~~----------itG~~i~vdGG 274 (275)
T 4imr_A 242 RAGRPEEMVGAALFLASEACSF----------MTGETIFLTGG 274 (275)
T ss_dssp SCBCGGGGHHHHHHHHSGGGTT----------CCSCEEEESSC
T ss_pred CCcCHHHHHHHHHHHcCcccCC----------CCCCEEEeCCC
Confidence 2567899999999988765432 44589999876
No 244
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=99.93 E-value=2.7e-24 Score=196.13 Aligned_cols=219 Identities=16% Similarity=0.110 Sum_probs=161.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
++|+++||||+|+||++++++|+++|++|++++|+.+..+........ ....++.++.+|++|.++++++++.+
T Consensus 1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ--EQGVEVFYHHLDVSKAESVEEFSKKVLERF 78 (235)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHCCCEEEEECCTTCHHHHHHHCC-HHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--hcCCeEEEEEeccCCHHHHHHHHHHHHHhc
Confidence 468999999999999999999999999999999976554443333221 12468999999999999999998865
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS---DPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++... +.+ ++|++||...+.. .
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~ii~~sS~~~~~~------------~ 145 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGG-LALVTTSDVSARL------------I 145 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEECCGGGSSC------------C
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-cEEEEecchhccc------------C
Confidence 6899999999865432 23344679999999999998887542 222 6777777554421 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh-CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHH
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY-GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYID 304 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~-~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 304 (424)
.....|+.||++.+.+++.+..+. ++++++|+||.|.++...... .......++..+
T Consensus 146 ~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~----------------------~~~~~~~~~~p~ 203 (235)
T 3l77_A 146 PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP----------------------GKPKEKGYLKPD 203 (235)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS----------------------CCCGGGTCBCHH
T ss_pred CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC----------------------CcccccCCCCHH
Confidence 334789999999999999985443 899999999999876432100 011122578899
Q ss_pred HHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 305 DIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 305 Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
|+|++++.++..+... ..+++....++..
T Consensus 204 dva~~v~~l~~~~~~~----------~~~~~~~~~~~~~ 232 (235)
T 3l77_A 204 EIAEAVRCLLKLPKDV----------RVEELMLRSVYQR 232 (235)
T ss_dssp HHHHHHHHHHTSCTTC----------CCCEEEECCTTSC
T ss_pred HHHHHHHHHHcCCCCC----------ccceEEEeecccC
Confidence 9999999999887643 2336666655553
No 245
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=99.93 E-value=5.3e-25 Score=201.42 Aligned_cols=219 Identities=14% Similarity=0.085 Sum_probs=158.7
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||++++++|+++|++|++++|+.+. ...+ . ++.++.+|++| +++.++++..
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~-------~~~~-~---~~~~~~~D~~~-~~~~~~~~~~~~~~g 69 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE-------AAQS-L---GAVPLPTDLEK-DDPKGLVKRALEALG 69 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH-------HHHH-H---TCEEEECCTTT-SCHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-------HHHh-h---CcEEEecCCch-HHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999997643 1111 1 27889999999 8777776543
Q ss_pred CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||...... ..++.+..+++|+.++.++++++. +.+.+ +||++||...+.... .
T Consensus 70 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~~----------~ 138 (239)
T 2ekp_A 70 GLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWG-RVLFIGSVTTFTAGG----------P 138 (239)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCCT----------T
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECchhhccCCC----------C
Confidence 6799999999754321 223446799999999988887763 44544 999999988875321 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTY 302 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 302 (424)
.+...|+.||++.+.+++.++.++ |+++++||||.+.++........+.+...+....+ ...+.+
T Consensus 139 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p------------~~~~~~ 206 (239)
T 2ekp_A 139 VPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIP------------MGRWAR 206 (239)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCT------------TSSCBC
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCC------------CCCCcC
Confidence 345789999999999999998775 89999999999998742110000112222222111 123789
Q ss_pred HHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 303 IDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 303 v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+|+|++++.++...... ..|+.+++.+|.
T Consensus 207 ~~dvA~~~~~l~s~~~~~----------~tG~~~~vdgG~ 236 (239)
T 2ekp_A 207 PEEIARVAAVLCGDEAEY----------LTGQAVAVDGGF 236 (239)
T ss_dssp HHHHHHHHHHHTSGGGTT----------CCSCEEEESTTT
T ss_pred HHHHHHHHHHHcCchhcC----------CCCCEEEECCCc
Confidence 999999999988654322 344899998774
No 246
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.93 E-value=9.3e-25 Score=200.70 Aligned_cols=201 Identities=13% Similarity=0.075 Sum_probs=147.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++|+|+||||+|+||++++++|+++| ++|++++|+.+..... . +. ...++.++.+|++|.++++++++.+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l----~-~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL----K-SI-KDSRVHVLPLTVTCDKSLDTFVSKVGE 75 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH----H-TC-CCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH----H-hc-cCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 57899999999999999999999999 9999999976543221 1 11 2457899999999999999988854
Q ss_pred -----CccEEEEcccccC-ch----hhccChHHHHHHHHHHHHHHHHHHHhc----------CC----CCeEEEecCCcc
Q 042406 154 -----AFTHVMHLAAQAG-VR----YAMQNPNSYVESNIAGFVNLLETCKSS----------DP----QPAIVWASSSSV 209 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~-~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~----------~~----~~~~v~~SS~~v 209 (424)
++|+||||||... .. ...++.+..+++|+.++.++++++... +. .++||++||...
T Consensus 76 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 155 (250)
T 1yo6_A 76 IVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG 155 (250)
T ss_dssp HHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG
T ss_pred hcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc
Confidence 6799999999865 21 122334678999999999988876543 30 249999999877
Q ss_pred cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCcee
Q 042406 210 YGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRIT 286 (424)
Q Consensus 210 yg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 286 (424)
+..... + ..+..+...|+.||++.+.+++.++.++ |+++++|+||.|.++....
T Consensus 156 ~~~~~~----~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------------ 212 (250)
T 1yo6_A 156 SITDNT----S-GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------------ 212 (250)
T ss_dssp CSTTCC----S-TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-------------------------
T ss_pred ccCCcc----c-ccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC------------------
Confidence 643211 0 1111456789999999999999998875 8999999999998763210
Q ss_pred EEecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 287 VYEAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 287 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
..+++.+|+|++++.++....
T Consensus 213 -----------~~~~~~~~~a~~~~~~~~~~~ 233 (250)
T 1yo6_A 213 -----------NAALTVEQSTAELISSFNKLD 233 (250)
T ss_dssp -----------------HHHHHHHHHHHTTCC
T ss_pred -----------CCCCCHHHHHHHHHHHHhccc
Confidence 025778999999999998764
No 247
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=99.93 E-value=4.4e-25 Score=199.80 Aligned_cols=210 Identities=13% Similarity=0.048 Sum_probs=159.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-C
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-A 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~ 154 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+ +|++|.++++++++.. +
T Consensus 3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-----------------------~D~~~~~~v~~~~~~~g~ 59 (223)
T 3uce_A 3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-----------------------LDISDEKSVYHYFETIGA 59 (223)
T ss_dssp --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-----------------------CCTTCHHHHHHHHHHHCS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-----------------------cCCCCHHHHHHHHHHhCC
Confidence 467899999999999999999999999999999998321 7999999999999875 6
Q ss_pred ccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTDQPA 228 (424)
Q Consensus 155 ~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~ 228 (424)
+|+||||||.... ....++.+..+++|+.|+.++++++.+... ..+||++||...+.. ..+.
T Consensus 60 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~~~ 127 (223)
T 3uce_A 60 FDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV------------VANT 127 (223)
T ss_dssp EEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC------------CTTC
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC------------CCCc
Confidence 7999999997632 122333467899999999999999876521 238999999877653 1455
Q ss_pred ChHHHHHHHHHHHHHHHHHHhC-CcEEEEEeccccCCCCCCCCc--HHHHHHHHHcCCceeEEecCCCCccccccccHHH
Q 042406 229 SLYAATKKAGEAIAHAYNHIYG-LSITGLRFFTVYGPWGRPDMA--YFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~-i~~~~vrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 305 (424)
..|++||++.+.+++.++.+++ +++++|+||.|.++....... ...+........+ ...+.+++|
T Consensus 128 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~d 195 (223)
T 3uce_A 128 YVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLP------------VGKVGEASD 195 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHST------------TCSCBCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCC------------CCCccCHHH
Confidence 7899999999999999998875 999999999999875432110 1112222222222 123778999
Q ss_pred HHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 306 IVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 306 va~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
+|++++.++.... ..|+++++.+|..+
T Consensus 196 vA~~~~~l~~~~~------------~tG~~i~vdgG~~~ 222 (223)
T 3uce_A 196 IAMAYLFAIQNSY------------MTGTVIDVDGGALL 222 (223)
T ss_dssp HHHHHHHHHHCTT------------CCSCEEEESTTGGG
T ss_pred HHHHHHHHccCCC------------CCCcEEEecCCeec
Confidence 9999999887422 34589999988654
No 248
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=99.93 E-value=8.1e-25 Score=201.22 Aligned_cols=217 Identities=13% Similarity=0.078 Sum_probs=157.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||++++++|+++|++|++++|+.+... .+..+.+|++|.++++++++.+
T Consensus 12 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~~D~~~~~~~~~~~~~~~~ 77 (247)
T 1uzm_A 12 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK--------------GLFGVEVDVTDSDAVDRAFTAVEE 77 (247)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT--------------TSEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH--------------HhcCeeccCCCHHHHHHHHHHHHH
Confidence 467899999999999999999999999999999999654321 1224889999999999888764
Q ss_pred ---CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.+ .+. ++||++||...+...
T Consensus 78 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~~--------- 147 (247)
T 1uzm_A 78 HQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKF-GRMIFIGSVSGLWGI--------- 147 (247)
T ss_dssp HHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-EEEEEECCCCC-------------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCC-CEEEEECCHhhccCC---------
Confidence 679999999986432 12334467999999999998887653 444 399999997654321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
.+...|+.||.+.+.+++.++.++ |+++++|+||.|.++.... ........+.... ....
T Consensus 148 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~------------p~~~ 210 (247)
T 1uzm_A 148 ---GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA--LDERIQQGALQFI------------PAKR 210 (247)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH--SCHHHHHHHGGGC------------TTCS
T ss_pred ---CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh--cCHHHHHHHHhcC------------CCCC
Confidence 345789999999999999998774 8999999999998762110 0011111111110 1123
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
+.+++|+|++++.++...... ..|+++++.+|..
T Consensus 211 ~~~~~dvA~~~~~l~s~~~~~----------~~G~~i~vdgG~~ 244 (247)
T 1uzm_A 211 VGTPAEVAGVVSFLASEDASY----------ISGAVIPVDGGMG 244 (247)
T ss_dssp CBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTTT
T ss_pred CcCHHHHHHHHHHHcCccccC----------CcCCEEEECCCcc
Confidence 789999999999988754322 3448999988754
No 249
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=99.93 E-value=3.8e-25 Score=203.03 Aligned_cols=220 Identities=13% Similarity=0.122 Sum_probs=162.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKK-RGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.++|++|||||+|+||++++++|++ .|+.|++.+|+.+. ....+.++.+|++|.++++++++..
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-------------~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 68 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-------------SAENLKFIKADLTKQQDITNVLDIIKN 68 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-------------CCTTEEEEECCTTCHHHHHHHHHHTTT
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-------------ccccceEEecCcCCHHHHHHHHHHHHh
Confidence 4678999999999999999999999 78999999985431 1246789999999999999988644
Q ss_pred -CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHHhcCCC-CeEEEecCCcccCCCCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCKSSDPQ-PAIVWASSSSVYGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~ 227 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++...... .+||++||...+.. ..+
T Consensus 69 ~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------------~~~ 136 (244)
T 4e4y_A 69 VSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIA------------KPN 136 (244)
T ss_dssp CCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCC------------CTT
T ss_pred CCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccC------------CCC
Confidence 679999999986432 123334678999999999999998765321 38999999877642 134
Q ss_pred CChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCC---------cHHHHHHHHHcCCceeEEecCCCCc
Q 042406 228 ASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDM---------AYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
...|++||++.+.+++.++.+ .|+++++|+||.|.+|...... ............ .
T Consensus 137 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 204 (244)
T 4e4y_A 137 SFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKE------------F 204 (244)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTT------------S
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhc------------C
Confidence 578999999999999999875 4899999999999886321000 000011111111 1
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
....+.+++|+|++++.++...... ..|+++++.+|..
T Consensus 205 p~~r~~~p~dvA~~v~~l~s~~~~~----------itG~~i~vdGG~~ 242 (244)
T 4e4y_A 205 PLNRIAQPQEIAELVIFLLSDKSKF----------MTGGLIPIDGGYT 242 (244)
T ss_dssp TTSSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTGG
T ss_pred CCCCCcCHHHHHHHHHHHhcCcccc----------ccCCeEeECCCcc
Confidence 2234788999999999998765432 3458999988753
No 250
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=99.93 E-value=1.1e-24 Score=203.05 Aligned_cols=232 Identities=16% Similarity=0.089 Sum_probs=163.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+..... ..+ ..++.++.+|++|.++++++++.+
T Consensus 6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~ 78 (270)
T 1yde_A 6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRAL----EQE---LPGAVFILCDVTQEDDVKTLVSETIR 78 (270)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHH---CTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHH---hcCCeEEEcCCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999965332211 111 135889999999999999988765
Q ss_pred ---CccEEEEcccccCc--hh---hccChHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEecCCccc-CCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV--RY---AMQNPNSYVESNIAGFVNLLETCKSS---DPQPAIVWASSSSVY-GVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~--~~---~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~~v~~SS~~vy-g~~~~~~~~e~ 221 (424)
++|+||||||.... .. ..++.+..+++|+.|+.++++++... .. ++||++||...+ +.
T Consensus 79 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~--------- 148 (270)
T 1yde_A 79 RFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQ-GNVINISSLVGAIGQ--------- 148 (270)
T ss_dssp HHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCHHHHHCC---------
T ss_pred HcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEcCccccCCC---------
Confidence 68999999997542 11 12234678999999999998887532 22 499999997543 32
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCC----CCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRP----DMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
.....|+.||++.+.+++.++.+ .|+++++|+||.|+++.... ...............+
T Consensus 149 ----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p---------- 214 (270)
T 1yde_A 149 ----AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQP---------- 214 (270)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTST----------
T ss_pred ----CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCC----------
Confidence 33578999999999999999876 48999999999999873110 0000000111111111
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHH
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVS 351 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~ 351 (424)
...+...+|+|++++.++..... ..|+++++.+|..+...+...
T Consensus 215 --~~r~~~p~dva~~v~~L~s~~~~-----------itG~~i~vdGG~~~~~~~~~~ 258 (270)
T 1yde_A 215 --LGRMGQPAEVGAAAVFLASEANF-----------CTGIELLVTGGAELGYGCKAS 258 (270)
T ss_dssp --TSSCBCHHHHHHHHHHHHHHCTT-----------CCSCEEEESTTTTSCC-----
T ss_pred --CCCCcCHHHHHHHHHHHcccCCC-----------cCCCEEEECCCeecccCcCcc
Confidence 11267899999999988875221 344899999987666544443
No 251
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=99.93 E-value=4.9e-25 Score=206.54 Aligned_cols=216 Identities=17% Similarity=0.130 Sum_probs=153.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.++++|++|||||+|+||++++++|+++|++|++++|+.+..+........ .....+.++.+|++|.++++++++.+
T Consensus 29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 106 (281)
T 4dry_A 29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG--RTGNIVRAVVCDVGDPDQVAALFAAVR 106 (281)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999976554443333222 12334689999999999999998866
Q ss_pred ----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHHh----cC-CCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCKS----SD-PQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~-~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.. .+ ...+||++||...+..
T Consensus 107 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~------- 179 (281)
T 4dry_A 107 AEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTP------- 179 (281)
T ss_dssp HHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCC-------
T ss_pred HHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCC-------
Confidence 789999999985431 12334467999999998877776543 32 1238999999776532
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||.|.++... .+... ... ......
T Consensus 180 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~----------~~~~~----~~~-~~~~~~ 239 (281)
T 4dry_A 180 -----RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTA----------RMSTG----VLQ-ANGEVA 239 (281)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-----------------CE----EEC-TTSCEE
T ss_pred -----CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhh----------hhcch----hhh-hhhccc
Confidence 145688999999999999999877 4899999999999876321 11110 000 001112
Q ss_pred ccccccHHHHHHHHHHHhhhccc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
...++.++|+|++++.++..+..
T Consensus 240 ~~~~~~pedvA~~v~fL~s~~~~ 262 (281)
T 4dry_A 240 AEPTIPIEHIAEAVVYMASLPLS 262 (281)
T ss_dssp ECCCBCHHHHHHHHHHHHHSCTT
T ss_pred ccCCCCHHHHHHHHHHHhCCCcc
Confidence 22378999999999999987653
No 252
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=99.93 E-value=2.9e-25 Score=197.72 Aligned_cols=180 Identities=14% Similarity=0.140 Sum_probs=143.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-CccEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-AFTHV 158 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-~~d~v 158 (424)
|+|+||||+|+||++++++|+ +|++|++++|+.+ ++.+|++|.+++++++++. ++|+|
T Consensus 4 M~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~--------------------~~~~D~~~~~~~~~~~~~~~~~d~v 62 (202)
T 3d7l_A 4 MKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG--------------------DVTVDITNIDSIKKMYEQVGKVDAI 62 (202)
T ss_dssp CEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS--------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred cEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc--------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence 589999999999999999999 9999999999532 4789999999999999875 57999
Q ss_pred EEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHH
Q 042406 159 MHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAA 233 (424)
Q Consensus 159 i~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~ 233 (424)
|||||....... .++.+..+++|+.++.++++++.+... +++||++||...+.. ..+...|+.
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~------------~~~~~~Y~~ 130 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDP------------IVQGASAAM 130 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSC------------CTTCHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCC------------CCccHHHHH
Confidence 999997543221 222356889999999999999987611 138999999876542 144578999
Q ss_pred HHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHH
Q 042406 234 TKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCL 311 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~ 311 (424)
+|.+.|.+++.++.++ |++++++|||.++++.. .. + .....+++++++|+|++++
T Consensus 131 sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~-----------~~--~----------~~~~~~~~~~~~dva~~~~ 187 (202)
T 3d7l_A 131 ANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWD-----------KL--E----------PFFEGFLPVPAAKVARAFE 187 (202)
T ss_dssp HHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHH-----------HH--G----------GGSTTCCCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCeEEEEEecCccCCchh-----------hh--h----------hhccccCCCCHHHHHHHHH
Confidence 9999999999998764 89999999999998721 00 0 1122456899999999998
Q ss_pred HHhh
Q 042406 312 AGLD 315 (424)
Q Consensus 312 ~~~~ 315 (424)
.++.
T Consensus 188 ~~~~ 191 (202)
T 3d7l_A 188 KSVF 191 (202)
T ss_dssp HHHH
T ss_pred Hhhh
Confidence 8873
No 253
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=99.93 E-value=7.5e-25 Score=203.25 Aligned_cols=228 Identities=15% Similarity=0.111 Sum_probs=161.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~ 80 (262)
T 1zem_A 4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVRE---KGVEARSYVCDVTSEEAVIGTVDSVVR 80 (262)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT---TTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---cCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999975443332222211 1346889999999999998888755
Q ss_pred ---CccEEEEccccc-Cch----hhccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQA-GVR----YAMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~-~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.. ... ...++.+..+++|+.|+.++++++.. .+. ++||++||...+...
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-------- 151 (262)
T 1zem_A 81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNY-GRIVNTASMAGVKGP-------- 151 (262)
T ss_dssp HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC-EEEEEECCHHHHSCC--------
T ss_pred HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-cEEEEEcchhhccCC--------
Confidence 689999999975 221 12233467899999999988887654 343 399999997766421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCC------------Cc-HHH-HHHHHHcCCc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPD------------MA-YFF-FTRDIIRGKR 284 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~------------~~-~~~-~~~~~~~~~~ 284 (424)
.....|+.||.+.+.+++.++.++ |+++++|+||.|..+..... .. ... ....+....+
T Consensus 152 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 227 (262)
T 1zem_A 152 ----PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVP 227 (262)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTST
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCC
Confidence 335789999999999999998764 89999999999977621100 00 000 1111111111
Q ss_pred eeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 285 ITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 285 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
..-+...+|+|++++.++...... ..|+++.+.+|
T Consensus 228 ------------~~r~~~p~dvA~~v~~l~s~~~~~----------itG~~i~vdGG 262 (262)
T 1zem_A 228 ------------MRRYGDINEIPGVVAFLLGDDSSF----------MTGVNLPIAGG 262 (262)
T ss_dssp ------------TSSCBCGGGSHHHHHHHHSGGGTT----------CCSCEEEESCC
T ss_pred ------------CCCCcCHHHHHHHHHHHcCchhcC----------cCCcEEecCCC
Confidence 112677899999999888754322 34478888764
No 254
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.7e-25 Score=207.17 Aligned_cols=228 Identities=14% Similarity=0.116 Sum_probs=167.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD---GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
.+++|++|||||+|+||++++++|+++|+ +|++++|+.+..+......... ....++.++.+|++|.++++++++.
T Consensus 30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~d~~~v~~~~~~ 108 (287)
T 3rku_A 30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQE-FPNAKVHVAQLDITQAEKIKPFIEN 108 (287)
T ss_dssp HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH-CTTCEEEEEECCTTCGGGHHHHHHT
T ss_pred hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhh-CCCCeEEEEECCCCCHHHHHHHHHH
Confidence 46889999999999999999999999998 9999999765544433332221 1245789999999999999999987
Q ss_pred c-----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
+ ++|+||||||..... ...++.+..+++|+.|+.++++++ ++.+.+ +||++||...+..
T Consensus 109 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-~IV~isS~~~~~~------ 181 (287)
T 3rku_A 109 LPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSG-DIVNLGSIAGRDA------ 181 (287)
T ss_dssp SCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCGGGTSC------
T ss_pred HHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEECChhhcCC------
Confidence 6 689999999975421 123345679999999999988877 444444 9999999776542
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCC--CCCcHHHHHHHHHcCCceeEEecCCC
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGR--PDMAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
......|++||++.+.+++.++.++ |+++++|+||.|.++... ..... .........
T Consensus 182 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~----------- 243 (287)
T 3rku_A 182 ------YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNE-EQAKNVYKD----------- 243 (287)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCH-HHHHHHHTT-----------
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcH-HHHHHhhcc-----------
Confidence 1445789999999999999999884 899999999999887210 00000 011111111
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
...+.++|+|++++.++...... ..++++.+.++++
T Consensus 244 ----~~p~~pedvA~~v~~l~s~~~~~----------i~g~~i~v~~g~~ 279 (287)
T 3rku_A 244 ----TTPLMADDVADLIVYATSRKQNT----------VIADTLIFPTNQA 279 (287)
T ss_dssp ----SCCEEHHHHHHHHHHHHTSCTTE----------EEEEEEEEETTEE
T ss_pred ----cCCCCHHHHHHHHHHHhCCCCCe----------EecceEEeeCCCC
Confidence 11347899999999998876532 3347888887764
No 255
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=99.93 E-value=6.9e-24 Score=197.18 Aligned_cols=204 Identities=16% Similarity=0.112 Sum_probs=154.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCC---CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHh
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRG---DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIF 150 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~ 150 (424)
...+++|+|+||||+|+||++++++|+++| ++|++++|+.+..... ..... ...++.++.+|++|.+++++++
T Consensus 16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~---~~~~~~~~~~Dl~~~~~v~~~~ 91 (267)
T 1sny_A 16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAK---NHSNIHILEIDLRNFDAYDKLV 91 (267)
T ss_dssp ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHH---HCTTEEEEECCTTCGGGHHHHH
T ss_pred ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhc---cCCceEEEEecCCChHHHHHHH
Confidence 445788999999999999999999999999 9999999987654321 11111 1357999999999999999988
Q ss_pred hcc-------CccEEEEcccccC-c----hhhccChHHHHHHHHHHHHHHHHHHHhc----------CC----CCeEEEe
Q 042406 151 NVV-------AFTHVMHLAAQAG-V----RYAMQNPNSYVESNIAGFVNLLETCKSS----------DP----QPAIVWA 204 (424)
Q Consensus 151 ~~~-------~~d~vi~~Ag~~~-~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~----------~~----~~~~v~~ 204 (424)
+.+ ++|+||||||... . ....++.+..+++|+.++.++++++... +. .++||++
T Consensus 92 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i 171 (267)
T 1sny_A 92 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM 171 (267)
T ss_dssp HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred HHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence 754 5799999999865 1 1223344678999999999998887543 10 2489999
Q ss_pred cCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHc
Q 042406 205 SSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIR 281 (424)
Q Consensus 205 SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~ 281 (424)
||...+.... ...+...|+.||++.+.+++.++.+ .|+++++||||.|.++....
T Consensus 172 sS~~~~~~~~---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------- 229 (267)
T 1sny_A 172 SSILGSIQGN---------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS------------- 229 (267)
T ss_dssp CCGGGCSTTC---------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-------------
T ss_pred ecccccccCC---------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-------------
Confidence 9988765321 1135578999999999999999877 48999999999998763321
Q ss_pred CCceeEEecCCCCccccccccHHHHHHHHHHHhhhccc
Q 042406 282 GKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKK 319 (424)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~ 319 (424)
..++..+|+|+.++.++.....
T Consensus 230 ----------------~~~~~~~~~a~~~~~~~~~~~~ 251 (267)
T 1sny_A 230 ----------------SAPLDVPTSTGQIVQTISKLGE 251 (267)
T ss_dssp ----------------TCSBCHHHHHHHHHHHHHHCCG
T ss_pred ----------------CCCCCHHHHHHHHHHHHHhcCc
Confidence 0246789999999999987543
No 256
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=99.93 E-value=2.3e-24 Score=205.91 Aligned_cols=177 Identities=16% Similarity=0.134 Sum_probs=133.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCch-hhhHHHHHhh-hhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYY-ETSLKKARKG-LLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
+++|+++||||+|+||++++++|+++|++|++.+|+.... .......... .....++.++.+|++|.+++.++++.+
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999964222 1111211111 112457999999999999999998865
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||+..... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||.+.+...
T Consensus 83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g-~iV~isS~~~~~~~-------- 153 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHG-LLIWISSSSSAGGT-------- 153 (324)
T ss_dssp HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC--------
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEEecchhccCC--------
Confidence 6899999999754321 22334578999999999998887 555554 89999998776421
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCC
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPW 265 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~ 265 (424)
......|++||++.|.+++.++.+ .|+++++|+||.|.++.
T Consensus 154 ---~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 154 ---PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp ---CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC----
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCc
Confidence 123478999999999999999887 48999999999998764
No 257
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=99.93 E-value=6.4e-24 Score=195.24 Aligned_cols=229 Identities=16% Similarity=0.107 Sum_probs=166.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.+++||+++||||+++||+++++.|+++|++|++.+|+.+.... ..... ....++.++.+|++|+++++++++++
T Consensus 3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~-~~~~~---~~~~~~~~~~~Dv~~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAF-LDALA---QRQPRATYLPVELQDDAQCRDAVAQTI 78 (258)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHH-HHHHH---HHCTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHH-HHHHH---hcCCCEEEEEeecCCHHHHHHHHHHHH
Confidence 35899999999999999999999999999999999998765322 11111 13467899999999999998888765
Q ss_pred ----CccEEEEcccccCchh---hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY---AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~---~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|++|||||+..... ..++.+..+++|+.|+.++.+++. +.+ .+||++||...+...
T Consensus 79 ~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~--------- 147 (258)
T 4gkb_A 79 ATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNISSKTAVTGQ--------- 147 (258)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTHHHHCC---------
T ss_pred HHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEeehhhccCC---------
Confidence 7899999999854322 233346789999999887766653 333 389999997665321
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCC----cHHHHHHHHHcCCceeEEecCCCCc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDM----AYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
.....|++||.+.+.+.+.++.++ ||++++|.||.|..|...... ........+....|+ +
T Consensus 148 ---~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl------g--- 215 (258)
T 4gkb_A 148 ---GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPL------G--- 215 (258)
T ss_dssp ---SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTT------T---
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCC------C---
Confidence 345789999999999999999775 899999999999887432110 001122223332221 0
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+-+...+|+|.+++.++...... ..|+++.|.+|-
T Consensus 216 --~R~g~peeiA~~v~fLaS~~a~~----------iTG~~i~VDGG~ 250 (258)
T 4gkb_A 216 --RRFTTPDEIADTAVFLLSPRASH----------TTGEWLFVDGGY 250 (258)
T ss_dssp --TSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTT
T ss_pred --CCCcCHHHHHHHHHHHhCchhcC----------ccCCeEEECCCc
Confidence 12567899999999888665433 455899998874
No 258
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=99.92 E-value=5.9e-24 Score=193.73 Aligned_cols=213 Identities=16% Similarity=0.140 Sum_probs=158.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
.|+||||||+++||+++++.|+++|++|++.+|+.+... .... ...++.++++|++|+++++++++.+
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~----~~~~---~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g 74 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSA----DFAK---ERPNLFYFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHT---TCTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHH---hcCCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 378999999999999999999999999999999643221 1111 2457899999999999999888765
Q ss_pred CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
++|+||||||...... ..++.+..+++|+.|+..+.+++. +.+ .++|++||...+...
T Consensus 75 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~--G~IInisS~~~~~~~------------ 140 (247)
T 3ged_A 75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNK--GRIINIASTRAFQSE------------ 140 (247)
T ss_dssp CCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGTSCC------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CcEEEEeecccccCC------------
Confidence 7899999999865422 233446799999999888777654 333 389999997765321
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
.....|++||.+...+.+.++.++ |+++++|.||.|-.+.... +.......-|+. -+...
T Consensus 141 ~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~------~~~~~~~~~Pl~------------R~g~p 202 (247)
T 3ged_A 141 PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE------FTQEDCAAIPAG------------KVGTP 202 (247)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---------CCHHHHHTSTTS------------SCBCH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH------HHHHHHhcCCCC------------CCcCH
Confidence 335789999999999999999876 7999999999997764321 122233322221 15678
Q ss_pred HHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 304 DDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+|+|.+++.++... . ..|+++.|.+|-
T Consensus 203 ediA~~v~fL~s~~-~-----------iTG~~i~VDGG~ 229 (247)
T 3ged_A 203 KDISNMVLFLCQQD-F-----------ITGETIIVDGGM 229 (247)
T ss_dssp HHHHHHHHHHHHCS-S-----------CCSCEEEESTTG
T ss_pred HHHHHHHHHHHhCC-C-----------CCCCeEEECcCH
Confidence 99999999988632 1 455899998874
No 259
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=99.92 E-value=9.5e-25 Score=204.68 Aligned_cols=228 Identities=14% Similarity=0.100 Sum_probs=167.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|++|||||+|+||++++++|+++|++|++++|+.+........ . ..++.++.+|++|.++++++++.+
T Consensus 26 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~-----~-~~~~~~~~~Dl~~~~~v~~~~~~~~ 99 (281)
T 3ppi_A 26 KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADE-----L-GNRAEFVSTNVTSEDSVLAAIEAAN 99 (281)
T ss_dssp GGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-----H-CTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred hccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-----h-CCceEEEEcCCCCHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999965433322211 1 357899999999999999988754
Q ss_pred ---CccEEEEc-ccccCch---------hhccChHHHHHHHHHHHHHHHHHHHhc---------CCCCeEEEecCCcccC
Q 042406 154 ---AFTHVMHL-AAQAGVR---------YAMQNPNSYVESNIAGFVNLLETCKSS---------DPQPAIVWASSSSVYG 211 (424)
Q Consensus 154 ---~~d~vi~~-Ag~~~~~---------~~~~~~~~~~~~N~~g~~~ll~a~~~~---------~~~~~~v~~SS~~vyg 211 (424)
++|+|||| |+..... ...++.+..+++|+.++.++++++... +...+||++||...+.
T Consensus 100 ~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~ 179 (281)
T 3ppi_A 100 QLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE 179 (281)
T ss_dssp TSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS
T ss_pred HhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC
Confidence 57999999 5543221 112224679999999999998877532 1223899999987764
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEE
Q 042406 212 VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVY 288 (424)
Q Consensus 212 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (424)
. ..+...|++||++.+.+++.++.++ |+++++|+||.|.++.... ........+....+.
T Consensus 180 ~------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~--- 242 (281)
T 3ppi_A 180 G------------QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES--VGEEALAKFAANIPF--- 242 (281)
T ss_dssp C------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT--TCHHHHHHHHHTCCS---
T ss_pred C------------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhc--ccHHHHHHHHhcCCC---
Confidence 2 1346789999999999999998775 8999999999998763211 011222333333221
Q ss_pred ecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCccc
Q 042406 289 EAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVP 345 (424)
Q Consensus 289 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s 345 (424)
...+.+++|+|++++.++.... ..|+++++.+|..++
T Consensus 243 --------~~~~~~pedvA~~v~~l~s~~~------------~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 243 --------PKRLGTPDEFADAAAFLLTNGY------------INGEVMRLDGAQRFT 279 (281)
T ss_dssp --------SSSCBCHHHHHHHHHHHHHCSS------------CCSCEEEESTTCCCC
T ss_pred --------CCCCCCHHHHHHHHHHHHcCCC------------cCCcEEEECCCcccC
Confidence 1247899999999999987532 445899999987654
No 260
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=99.92 E-value=3.2e-24 Score=199.50 Aligned_cols=231 Identities=13% Similarity=0.007 Sum_probs=170.5
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCch-hhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYY-ETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
++++|+++||||+ |+||++++++|+++|++|++++|+.... .......... ...++.++.+|++|.++++++++.
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT--YGIKAKAYKCQVDSYESCEKLVKD 94 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH--HCCCEECCBCCTTCHHHHHHHHHH
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh--cCCceeEEecCCCCHHHHHHHHHH
Confidence 5789999999999 9999999999999999999999977654 2222222211 246799999999999999998887
Q ss_pred c-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCC
Q 042406 153 V-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
+ ++|+||||||...... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+....
T Consensus 95 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g-~iv~isS~~~~~~~~----- 168 (267)
T 3gdg_A 95 VVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTG-SLVITASMSGHIANF----- 168 (267)
T ss_dssp HHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCGGGTSCCS-----
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCc-eEEEEccccccccCC-----
Confidence 6 7899999999865422 23334679999999999888877 444444 899999976653211
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHhC--CcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIYG--LSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
..+...|++||++.+.+++.++.+++ +++++|+||.|..+.... ........+....+ .
T Consensus 169 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~--~~~~~~~~~~~~~~------------~ 229 (267)
T 3gdg_A 169 -----PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF--VPKETQQLWHSMIP------------M 229 (267)
T ss_dssp -----SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG--SCHHHHHHHHTTST------------T
T ss_pred -----CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh--CCHHHHHHHHhcCC------------C
Confidence 13457899999999999999998863 899999999998764321 11222222322221 2
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
..+.+++|+|++++.++...... ..|+++++.+|..
T Consensus 230 ~r~~~~~dva~~~~~l~s~~~~~----------itG~~i~vdgG~~ 265 (267)
T 3gdg_A 230 GRDGLAKELKGAYVYFASDASTY----------TTGADLLIDGGYT 265 (267)
T ss_dssp SSCEETHHHHHHHHHHHSTTCTT----------CCSCEEEESTTGG
T ss_pred CCCcCHHHHHhHhheeecCcccc----------ccCCEEEECCcee
Confidence 34778899999999988754332 4458999988753
No 261
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=99.92 E-value=2.9e-24 Score=202.35 Aligned_cols=231 Identities=10% Similarity=-0.022 Sum_probs=166.0
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEe-CCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---------
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLD-NFNNYYETSLKKARKGLLERAGVFVIDADINDKS--------- 144 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~--------- 144 (424)
.++++|+++||||+|+||+++++.|+++|++|++++ |+.+........... ....++.++.+|++|.+
T Consensus 5 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (291)
T 1e7w_A 5 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA--RRPNSAITVQADLSNVATAPVSGADG 82 (291)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--HSTTCEEEEECCCSSSCBCCCC----
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhh--hcCCeeEEEEeecCCccccccccccc
Confidence 346789999999999999999999999999999999 865443332222211 12357899999999999
Q ss_pred --------HHHHHhhcc-----CccEEEEcccccCchh----h--------------ccChHHHHHHHHHHHHHHHHHHH
Q 042406 145 --------LLDKIFNVV-----AFTHVMHLAAQAGVRY----A--------------MQNPNSYVESNIAGFVNLLETCK 193 (424)
Q Consensus 145 --------~v~~~~~~~-----~~d~vi~~Ag~~~~~~----~--------------~~~~~~~~~~N~~g~~~ll~a~~ 193 (424)
++.++++.+ ++|+||||||...... . .++.+..+++|+.|+.++++++.
T Consensus 83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 162 (291)
T 1e7w_A 83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA 162 (291)
T ss_dssp CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence 998888765 6899999999854321 1 23345789999999998888765
Q ss_pred h----cCC-----CCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccc
Q 042406 194 S----SDP-----QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTV 261 (424)
Q Consensus 194 ~----~~~-----~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v 261 (424)
. .+. ..+||++||...+.. ..+...|++||++.+.+++.++.++ |+++++|+||.|
T Consensus 163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v 230 (291)
T 1e7w_A 163 HRVAGTPAKHRGTNYSIINMVDAMTNQP------------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLS 230 (291)
T ss_dssp HHHHTSCGGGSCSCEEEEEECCTTTTSC------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSB
T ss_pred HHHHhcCCCCCCCCcEEEEEechhhcCC------------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCc
Confidence 3 330 248999999877642 1345789999999999999998774 899999999999
Q ss_pred cCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 262 YGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 262 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
..+. . . .+.....+....++ + .-+...+|+|++++.++...... ..|+++++.+|
T Consensus 231 ~T~~-~--~-~~~~~~~~~~~~p~--------~---~r~~~pedvA~~v~~l~s~~~~~----------itG~~i~vdGG 285 (291)
T 1e7w_A 231 VLVD-D--M-PPAVWEGHRSKVPL--------Y---QRDSSAAEVSDVVIFLCSSKAKY----------ITGTCVKVDGG 285 (291)
T ss_dssp CCGG-G--S-CHHHHHHHHTTCTT--------T---TSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTT
T ss_pred cCCc-c--C-CHHHHHHHHhhCCC--------C---CCCCCHHHHHHHHHHHhCCcccC----------ccCcEEEECCC
Confidence 8775 2 1 12222333322111 0 02678999999999998754322 34589999887
Q ss_pred Ccc
Q 042406 342 TPV 344 (424)
Q Consensus 342 ~~~ 344 (424)
..+
T Consensus 286 ~~~ 288 (291)
T 1e7w_A 286 YSL 288 (291)
T ss_dssp GGG
T ss_pred ccc
Confidence 543
No 262
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.92 E-value=1.9e-24 Score=199.05 Aligned_cols=218 Identities=14% Similarity=0.061 Sum_probs=156.1
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
...+++|+|+||||+|+||++++++|+++|++|++++|+.+ . . +.. ..+.++ +|+ .++++++++..
T Consensus 14 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----~---~--~~~--~~~~~~-~D~--~~~~~~~~~~~ 79 (249)
T 1o5i_A 14 ELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEE----L---L--KRS--GHRYVV-CDL--RKDLDLLFEKV 79 (249)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHH----H---H--HHT--CSEEEE-CCT--TTCHHHHHHHS
T ss_pred HhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH----H---H--Hhh--CCeEEE-eeH--HHHHHHHHHHh
Confidence 44678999999999999999999999999999999999541 1 1 111 256777 999 45666666655
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHH----HHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNL----LETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~l----l~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+++|+.|+.++ ++.+++.+.+ +||++||...+...
T Consensus 80 ~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~----------- 147 (249)
T 1o5i_A 80 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWG-RIVAITSFSVISPI----------- 147 (249)
T ss_dssp CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC-----------
T ss_pred cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEEcchHhcCCC-----------
Confidence 6799999999754321 1233467899999997665 4455555654 99999998887531
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHH-HHHcCCceeEEecCCCCcccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTR-DIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.+...|+.||.+.+.+++.++.+ .|+++++|+||.|+++.... ....... .+....+ ...+
T Consensus 148 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~~~~~~~~~~~~p------------~~~~ 212 (249)
T 1o5i_A 148 -ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKE--LLSEEKKKQVESQIP------------MRRM 212 (249)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHH--HSCHHHHHHHHTTST------------TSSC
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccc--cchhhHHHHHHhcCC------------CCCC
Confidence 34578999999999999999876 48999999999999884210 0001111 2222111 1247
Q ss_pred ccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 301 TYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+++|+|++++.++...... ..|++|++.+|.
T Consensus 213 ~~~~dvA~~i~~l~s~~~~~----------~tG~~~~vdgG~ 244 (249)
T 1o5i_A 213 AKPEEIASVVAFLCSEKASY----------LTGQTIVVDGGL 244 (249)
T ss_dssp BCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTC
T ss_pred cCHHHHHHHHHHHcCccccC----------CCCCEEEECCCc
Confidence 89999999999888754322 334899998875
No 263
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=99.92 E-value=6.3e-24 Score=195.37 Aligned_cols=206 Identities=15% Similarity=0.182 Sum_probs=147.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----C
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-----A 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-----~ 154 (424)
|+++||||+|+||+++++.|+++|++|++++|+.+....... + . ..++.++.+|++|.++++++++.+ +
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~----~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 74 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKD----E-L-GDNLYIAQLDVRNRAAIEEMLASLPAEWCN 74 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----H-H-CTTEEEEECCTTCHHHHHHHHHTSCTTTCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----H-h-cCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 679999999999999999999999999999996543222111 1 1 247899999999999999999865 6
Q ss_pred ccEEEEcccccC-c----hhhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAG-V----RYAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRTD 225 (424)
Q Consensus 155 ~d~vi~~Ag~~~-~----~~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~ 225 (424)
+|+||||||... . ....++.+..+++|+.|+.++++++. +.+.+ +||++||...+.. .
T Consensus 75 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g-~iv~isS~~~~~~------------~ 141 (248)
T 3asu_A 75 IDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHG-HIINIGSTAGSWP------------Y 141 (248)
T ss_dssp CCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCGGGTSC------------C
T ss_pred CCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCc-eEEEEccchhccC------------C
Confidence 899999999752 1 11233446799999999988877765 34444 9999999877542 1
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEecccc-CCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVY-GPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|. .+..... +... .......+ ....++
T Consensus 142 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~-----~~~~--~~~~~~~~-------~~~~~~ 207 (248)
T 3asu_A 142 AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR-----FKGD--DGKAEKTY-------QNTVAL 207 (248)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------------------CCB
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc-----ccCc--hHHHHHHH-------hccCCC
Confidence 345789999999999999998775 8999999999999 4532110 0000 00000000 011246
Q ss_pred cHHHHHHHHHHHhhhcc
Q 042406 302 YIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~ 318 (424)
+.+|+|++++.++....
T Consensus 208 ~p~dvA~~v~~l~s~~~ 224 (248)
T 3asu_A 208 TPEDVSEAVWWVSTLPA 224 (248)
T ss_dssp CHHHHHHHHHHHHHSCT
T ss_pred CHHHHHHHHHHHhcCCc
Confidence 89999999999988644
No 264
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=99.92 E-value=2.7e-24 Score=195.96 Aligned_cols=196 Identities=13% Similarity=0.071 Sum_probs=142.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
.+|+|+||||+|+||++++++|+++|++|++++|+.+..... ..+ ..++.++.+|++|.++++++++.+
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~----~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 76 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQAL----AAE---LEGALPLPGDVREEGDWARAVAAMEEAF 76 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHH---STTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHH---hhhceEEEecCCCHHHHHHHHHHHHHHc
Confidence 467899999999999999999999999999999964322211 111 127889999999999999888754
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHH----HHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLE----TCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~----a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||...... ..++.+..+++|+.|+.++++ .+++.+.+ +||++||...+..
T Consensus 77 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~-~iv~isS~~~~~~------------ 143 (234)
T 2ehd_A 77 GELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGG-TIVNVGSLAGKNP------------ 143 (234)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCE-EEEEECCTTTTSC------------
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCc-EEEEECCchhcCC------------
Confidence 6799999999754321 223346799999999875554 45555544 9999999877642
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
..+...|+.+|.+.+.+++.++.++ |+++++||||.+.++.... . . . . + .++
T Consensus 144 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------~-~-~--~-~----------~~~ 198 (234)
T 2ehd_A 144 FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN----------T-P-G--Q-A----------WKL 198 (234)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC-----------------------------------------C
T ss_pred CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc----------c-c-c--c-c----------CCC
Confidence 1345789999999999999988763 8999999999998762210 0 0 0 0 0 157
Q ss_pred cHHHHHHHHHHHhhhcc
Q 042406 302 YIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~ 318 (424)
+.+|+|++++.++..+.
T Consensus 199 ~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 199 KPEDVAQAVLFALEMPG 215 (234)
T ss_dssp CHHHHHHHHHHHHHSCC
T ss_pred CHHHHHHHHHHHhCCCc
Confidence 89999999999987654
No 265
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=99.92 E-value=1.3e-24 Score=202.78 Aligned_cols=205 Identities=16% Similarity=0.068 Sum_probs=155.7
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+..+++|+|+||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~v~~~~~~~ 102 (272)
T 1yb1_A 26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG---LGAKVHTFVVDCSNREDIYSSAKKV 102 (272)
T ss_dssp CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh---cCCeEEEEEeeCCCHHHHHHHHHHH
Confidence 4457899999999999999999999999999999999975443332222211 1357899999999999999888754
Q ss_pred -----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++. +.+.+ +||++||...+...
T Consensus 103 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~iv~isS~~~~~~~------- 174 (272)
T 1yb1_A 103 KAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHG-HIVTVASAAGHVSV------- 174 (272)
T ss_dssp HHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCE-EEEEECCCC-CCCH-------
T ss_pred HHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCC-EEEEEechhhcCCC-------
Confidence 679999999986432 1223446799999999877766653 44544 99999998876421
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh------CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY------GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~------~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
.+...|+.||++.+.+++.++.++ |+++++|+||.|.++..... .
T Consensus 175 -----~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~~-----~------------------- 225 (272)
T 1yb1_A 175 -----PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP-----S------------------- 225 (272)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT-----H-------------------
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCccccc-----c-------------------
Confidence 234789999999999999998764 79999999999998743210 0
Q ss_pred ccccccccHHHHHHHHHHHhhhcc
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
.....+++++|+|++++.++....
T Consensus 226 ~~~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 226 TSLGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp HHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred ccccCCCCHHHHHHHHHHHHHcCC
Confidence 011247889999999999998764
No 266
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=99.92 E-value=2e-24 Score=197.05 Aligned_cols=200 Identities=17% Similarity=0.117 Sum_probs=149.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
++|++|||||+|+||++++++|+++|++|++++|+.+..+...... ..++.++.+|++|.++++++++.+
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 75 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL------GNAVIGIVADLAHHEDVDVAFAAAVEWG 75 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------GGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------cCCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 5789999999999999999999999999999999765433322211 125899999999999999988865
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDP--QPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~--~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++..... +.+||++||...+... .
T Consensus 76 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~------------~ 143 (235)
T 3l6e_A 76 GLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK------------A 143 (235)
T ss_dssp CSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC------------S
T ss_pred CCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC------------C
Confidence 6899999999854322 2334467999999999888887754211 1289999997665421 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccH
Q 042406 227 PASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYI 303 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 303 (424)
....|++||++.+.+++.++.++ |+++++|+||.|..+..... .. .. ...+...
T Consensus 144 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~----------~~---~~----------~~~~~~p 200 (235)
T 3l6e_A 144 NESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT----------DH---VD----------PSGFMTP 200 (235)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------------------CBCH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc----------CC---CC----------CcCCCCH
Confidence 45789999999999999999875 79999999999987632210 00 00 1137889
Q ss_pred HHHHHHHHHHhhhcc
Q 042406 304 DDIVKGCLAGLDTAK 318 (424)
Q Consensus 304 ~Dva~a~~~~~~~~~ 318 (424)
+|+|++++.++..+.
T Consensus 201 edvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 201 EDAAAYMLDALEARS 215 (235)
T ss_dssp HHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHhCCC
Confidence 999999999997654
No 267
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=99.92 E-value=1.6e-24 Score=202.85 Aligned_cols=219 Identities=16% Similarity=0.114 Sum_probs=155.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|++|||||+|+||++++++|+++|++|++++|+.+............ .....+.++.+|++|.++++++++.+
T Consensus 28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~ 106 (279)
T 1xg5_A 28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA-GYPGTLIPYRCDLSNEEDILSMFSAIR 106 (279)
T ss_dssp GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT-TCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhc-CCCceEEEEEecCCCHHHHHHHHHHHH
Confidence 3478899999999999999999999999999999999754433322222111 11245889999999999999888754
Q ss_pred ----CccEEEEcccccCchh----hccChHHHHHHHHHH----HHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAG----FVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g----~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||...... ..++.+..+++|+.+ +.++++.+++.+. .++||++||...+...
T Consensus 107 ~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~------- 179 (279)
T 1xg5_A 107 SQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL------- 179 (279)
T ss_dssp HHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC-------
T ss_pred HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccC-------
Confidence 6799999999754321 223346789999999 6677777777764 2499999998876421
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHH-----hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHI-----YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-----~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
+..+...|+++|++.+.+++.++.+ .++++++|+||.|.++... ........... ...
T Consensus 180 ---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~----------~~~~~~~~~~~----~~~ 242 (279)
T 1xg5_A 180 ---PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAF----------KLHDKDPEKAA----ATY 242 (279)
T ss_dssp ---SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHH----------HHTTTCHHHHH----HHH
T ss_pred ---CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhh----------hhcccChhHHh----hhc
Confidence 1134578999999999999988765 3799999999999886310 00000000000 000
Q ss_pred cccccccHHHHHHHHHHHhhhcc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
....+++++|+|++++.++..+.
T Consensus 243 ~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 243 EQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp C---CBCHHHHHHHHHHHHHSCT
T ss_pred ccccCCCHHHHHHHHHHHhcCCc
Confidence 11237889999999999998654
No 268
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=99.92 E-value=1.4e-24 Score=200.04 Aligned_cols=208 Identities=13% Similarity=0.122 Sum_probs=160.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
.+|+|+||||+|+||++++++|+++|++|++++|+.+.. ....+.+|++|.++++++++.+
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~---------------~~~~~~~d~~d~~~v~~~~~~~~~~~ 85 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN---------------ADHSFTIKDSGEEEIKSVIEKINSKS 85 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------SSEEEECSCSSHHHHHHHHHHHHTTT
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------------cccceEEEeCCHHHHHHHHHHHHHHc
Confidence 368999999999999999999999999999999976432 1235789999999999988876
Q ss_pred -CccEEEEcccccCc-----hhhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGV-----RYAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~-----~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 226 (424)
++|+||||||.... ....++.+..+++|+.|+.++++++..... ..+||++||...+.. ..
T Consensus 86 g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------~~ 153 (251)
T 3orf_A 86 IKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR------------TS 153 (251)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------CT
T ss_pred CCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC------------CC
Confidence 68999999997532 222344567999999999999998876421 238999999877642 14
Q ss_pred CCChHHHHHHHHHHHHHHHHHH-----hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 227 PASLYAATKKAGEAIAHAYNHI-----YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~-----~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
+...|+.||++.+.+++.++.+ .|+++++|+||.|.++ +...... ......++
T Consensus 154 ~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~----------~~~~~~~------------~~~~~~~~ 211 (251)
T 3orf_A 154 GMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTP----------TNRKYMS------------DANFDDWT 211 (251)
T ss_dssp TBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCH----------HHHHHCT------------TSCGGGSB
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCc----------chhhhcc------------cccccccC
Confidence 4578999999999999999877 4799999999999875 2222211 12234588
Q ss_pred cHHHHHHHHHHHhhh-ccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 302 YIDDIVKGCLAGLDT-AKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
+++|+|++++.++.. .... ..|+.+++.+++..
T Consensus 212 ~~~dva~~i~~l~~~~~~~~----------~tG~~i~v~~g~~~ 245 (251)
T 3orf_A 212 PLSEVAEKLFEWSTNSDSRP----------TNGSLVKFETKSKV 245 (251)
T ss_dssp CHHHHHHHHHHHHHCGGGCC----------CTTCEEEEEEETTE
T ss_pred CHHHHHHHHHHHhcCccccC----------CcceEEEEecCCcc
Confidence 999999999999987 3321 34588998876543
No 269
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=99.92 E-value=4.1e-24 Score=199.28 Aligned_cols=209 Identities=13% Similarity=0.025 Sum_probs=155.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKK-RGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.++|+|+||||+|+||++++++|++ +|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQA---EGLSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHH---TTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHh---cCCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 4678999999999999999999999 999999999975443332222221 1357899999999999999988855
Q ss_pred ---CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCC-CC----------
Q 042406 154 ---AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGV-NK---------- 214 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~-~~---------- 214 (424)
++|+||||||....... .++.+..+++|+.|+.++++++.+... .++||++||...+.. ..
T Consensus 79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~ 158 (276)
T 1wma_A 79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR 158 (276)
T ss_dssp HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcc
Confidence 67999999998643322 233467899999999999999987531 138999999777632 00
Q ss_pred CCCCCCCC------------------CCCCCCChHHHHHHHHHHHHHHHHHH-------hCCcEEEEEeccccCCCCCCC
Q 042406 215 KVPFSEKD------------------RTDQPASLYAATKKAGEAIAHAYNHI-------YGLSITGLRFFTVYGPWGRPD 269 (424)
Q Consensus 215 ~~~~~e~~------------------~~~~~~~~Y~~sK~~~e~~~~~~~~~-------~~i~~~~vrp~~v~G~~~~~~ 269 (424)
..++.|++ ....|...|+.||++.+.+++.++.+ .|+++++|+||.|.++....
T Consensus 159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~- 237 (276)
T 1wma_A 159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP- 237 (276)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-
T ss_pred ccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-
Confidence 00111111 01134589999999999999998866 48999999999998874321
Q ss_pred CcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 270 MAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
..+.+++|+|++++.++..+
T Consensus 238 ----------------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 ----------------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp ----------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred ----------------------------cccCChhHhhhhHhhhhcCc
Confidence 12678999999999998755
No 270
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=99.92 E-value=4.4e-24 Score=199.04 Aligned_cols=212 Identities=14% Similarity=0.134 Sum_probs=147.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.++ |++|||||+|+||++++++|+++|++|++++|+.+.......... ...++.++.+|++|.++++++++.+
T Consensus 19 ~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 93 (272)
T 2nwq_A 19 HMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELS----AKTRVLPLTLDVRDRAAMSAAVDNLPE 93 (272)
T ss_dssp --C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT----TTSCEEEEECCTTCHHHHHHHHHTCCG
T ss_pred CcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 345 899999999999999999999999999999997543332222111 1147899999999999999999876
Q ss_pred ---CccEEEEcccccCc--h---hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGV--R---YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~--~---~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+||||||.... . ...++.+..+++|+.|+.++++++ ++.+.+++||++||...+..
T Consensus 94 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~--------- 164 (272)
T 2nwq_A 94 EFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP--------- 164 (272)
T ss_dssp GGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC---------
T ss_pred HhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC---------
Confidence 68999999998542 1 122334678999999987776655 34443238999999877642
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVAR 298 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++..... +... .......+ . ..
T Consensus 165 ---~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~-----~~~~--~~~~~~~~----~---~~ 227 (272)
T 2nwq_A 165 ---YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR-----FGGD--QARYDKTY----A---GA 227 (272)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------------------CC
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc-----cccc--hHHHHHhh----c---cC
Confidence 1345789999999999999998764 89999999999998743210 0000 00000000 0 01
Q ss_pred ccccHHHHHHHHHHHhhhcc
Q 042406 299 DFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 299 ~~i~v~Dva~a~~~~~~~~~ 318 (424)
.++..+|+|++++.++....
T Consensus 228 ~~~~pedvA~~v~~l~s~~~ 247 (272)
T 2nwq_A 228 HPIQPEDIAETIFWIMNQPA 247 (272)
T ss_dssp CCBCHHHHHHHHHHHHTSCT
T ss_pred CCCCHHHHHHHHHHHhCCCc
Confidence 25789999999999987644
No 271
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.92 E-value=1.3e-24 Score=198.36 Aligned_cols=209 Identities=14% Similarity=0.112 Sum_probs=156.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
++|+++||||+|+||++++++|+++|++|++++|+.+... ..+.++.+|++|.++++++++.+
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~ 68 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-------------DSNILVDGNKNWTEQEQSILEQTASSL 68 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-------------SEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-------------cccEEEeCCCCCHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999764321 13567899999999998887742
Q ss_pred ---CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||..... ...++.+..+++|+.|+.++++++.+... ..+||++||...+..
T Consensus 69 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~------------ 136 (236)
T 1ooe_A 69 QGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP------------ 136 (236)
T ss_dssp TTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC------------
T ss_pred CCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC------------
Confidence 679999999975422 22334467899999999999998876421 238999999877642
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh-----CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY-----GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~-----~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|+.||.+.+.+++.++.++ |+++++|+||.|.++ +....... .....
T Consensus 137 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~----------~~~~~~~~------------~~~~~ 194 (236)
T 1ooe_A 137 TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP----------MNRKWMPN------------ADHSS 194 (236)
T ss_dssp CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH----------HHHHHSTT------------CCGGG
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCc----------chhhcCCC------------ccccc
Confidence 1445789999999999999998765 499999999999886 11111111 11234
Q ss_pred cccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 300 FTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
++..+|+|++++.++..+.... ..|+.+++.++.
T Consensus 195 ~~~~~dvA~~i~~~l~s~~~~~---------~~G~~~~v~gg~ 228 (236)
T 1ooe_A 195 WTPLSFISEHLLKWTTETSSRP---------SSGALLKITTEN 228 (236)
T ss_dssp CBCHHHHHHHHHHHHHCGGGCC---------CTTCEEEEEEET
T ss_pred cCCHHHHHHHHHHHHcCCCccc---------ccccEEEEecCC
Confidence 6788999999997764433211 334788887654
No 272
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=99.92 E-value=4e-24 Score=194.43 Aligned_cols=200 Identities=14% Similarity=0.109 Sum_probs=147.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--Ccc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--AFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--~~d 156 (424)
+|+||||||+|+||++++++|+++|++|++++|+.+..... ... . ..++.++.+|++|.++++++++++ .+|
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~----~~~-~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~d 74 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTV----TNC-L-SNNVGYRARDLASHQEVEQLFEQLDSIPS 74 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH----HHT-C-SSCCCEEECCTTCHHHHHHHHHSCSSCCS
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHH-H-hhccCeEeecCCCHHHHHHHHHHHhhcCC
Confidence 46799999999999999999999999999999965432221 111 1 457889999999999999999876 369
Q ss_pred EEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEecCCcccCCCCCCCCCCCCCCCCCCCh
Q 042406 157 HVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDP--QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASL 230 (424)
Q Consensus 157 ~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~--~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~ 230 (424)
+||||||...... ..++.+..+++|+.|+.++++++..... +.+||++||...+.. ..+...
T Consensus 75 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~------------~~~~~~ 142 (230)
T 3guy_A 75 TVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP------------KAQEST 142 (230)
T ss_dssp EEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC------------CTTCHH
T ss_pred EEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC------------CCCCch
Confidence 9999999764322 2233467899999999999888765421 128999999877642 145578
Q ss_pred HHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHH
Q 042406 231 YAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIV 307 (424)
Q Consensus 231 Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 307 (424)
|++||++.+.+++.++.++ |+++++|+||.|..+.... ... . .....+.+++|+|
T Consensus 143 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~----------~~~--~----------~~~~~~~~~~dvA 200 (230)
T 3guy_A 143 YCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWET----------SGK--S----------LDTSSFMSAEDAA 200 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------------------CCCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHh----------cCC--C----------CCcccCCCHHHHH
Confidence 9999999999999999886 8999999999998763211 100 0 1123478999999
Q ss_pred HHHHHHhhhcc
Q 042406 308 KGCLAGLDTAK 318 (424)
Q Consensus 308 ~a~~~~~~~~~ 318 (424)
++++.++..+.
T Consensus 201 ~~i~~l~~~~~ 211 (230)
T 3guy_A 201 LMIHGALANIG 211 (230)
T ss_dssp HHHHHHCCEET
T ss_pred HHHHHHHhCcC
Confidence 99999887654
No 273
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=99.92 E-value=1.7e-23 Score=189.03 Aligned_cols=201 Identities=13% Similarity=0.148 Sum_probs=146.8
Q ss_pred CeEEEEcCCChhHHHHHHHHH-hCCCeEEEEeCCCC-chhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALK-KRGDGVLGLDNFNN-YYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+|+||||+|+||++++++|+ ++|++|++++|+.+ ...... ....++.++.+|++|.+++.++++++ |+
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~~D~~d~~~~~~~~~~~--d~ 76 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-------IDHERVTVIEGSFQNPGXLEQAVTNA--EV 76 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-------HTSTTEEEEECCTTCHHHHHHHHTTC--SE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-------cCCCceEEEECCCCCHHHHHHHHcCC--CE
Confidence 569999999999999999999 89999999999643 221110 13468999999999999999999966 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCC-hHHHHHH
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPAS-LYAATKK 236 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~-~Y~~sK~ 236 (424)
||||||.. |+. +.++++++++.+.+ +||++||.++|+.... +..+.. ..... .|+.+|.
T Consensus 77 vv~~ag~~---------------n~~-~~~~~~~~~~~~~~-~iv~iSs~~~~~~~~~-~~~~~~--~~~~~~~y~~~K~ 136 (221)
T 3r6d_A 77 VFVGAMES---------------GSD-MASIVKALSRXNIR-RVIGVSMAGLSGEFPV-ALEKWT--FDNLPISYVQGER 136 (221)
T ss_dssp EEESCCCC---------------HHH-HHHHHHHHHHTTCC-EEEEEEETTTTSCSCH-HHHHHH--HHTSCHHHHHHHH
T ss_pred EEEcCCCC---------------Chh-HHHHHHHHHhcCCC-eEEEEeeceecCCCCc-cccccc--ccccccHHHHHHH
Confidence 99999852 444 89999999998876 9999999999874221 000000 01123 7999999
Q ss_pred HHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHh--
Q 042406 237 AGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGL-- 314 (424)
Q Consensus 237 ~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~-- 314 (424)
++|.+++. .++++++||||.++++..... ..... ........+++.+|+|++++.++
T Consensus 137 ~~e~~~~~----~~i~~~~vrpg~v~~~~~~~~---------------~~~~~--~~~~~~~~~~~~~dvA~~~~~l~~~ 195 (221)
T 3r6d_A 137 QARNVLRE----SNLNYTILRLTWLYNDPEXTD---------------YELIP--EGAQFNDAQVSREAVVKAIFDILHA 195 (221)
T ss_dssp HHHHHHHH----SCSEEEEEEECEEECCTTCCC---------------CEEEC--TTSCCCCCEEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHh----CCCCEEEEechhhcCCCCCcc---------------eeecc--CCccCCCceeeHHHHHHHHHHHHHh
Confidence 99988764 599999999999999732211 11110 11111224899999999999999
Q ss_pred hhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 315 DTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
.++... .++.+.+.++
T Consensus 196 ~~~~~~-----------~~~~~~i~~~ 211 (221)
T 3r6d_A 196 ADETPF-----------HRTSIGVGEP 211 (221)
T ss_dssp SCCGGG-----------TTEEEEEECT
T ss_pred cChhhh-----------hcceeeecCC
Confidence 665532 2267777754
No 274
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=99.92 E-value=6e-24 Score=199.15 Aligned_cols=229 Identities=13% Similarity=0.097 Sum_probs=162.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
++++|++|||||+|+||++++++|+++|++|++++|+.+...... .. ...++.++.+|++|.++++++++.+
T Consensus 2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 75 (281)
T 3zv4_A 2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELE----VA--HGGNAVGVVGDVRSLQDQKRAAERCLA 75 (281)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HH--TBTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHH----HH--cCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 367899999999999999999999999999999999654332211 11 2457899999999999999888766
Q ss_pred ---CccEEEEcccccCchhh---------ccChHHHHHHHHHHHHHHHHHHHhcC--CCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRYA---------MQNPNSYVESNIAGFVNLLETCKSSD--PQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~~---------~~~~~~~~~~N~~g~~~ll~a~~~~~--~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|+||||||+...... .++.+..+++|+.|+.++++++.... .+.+||++||...+...
T Consensus 76 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------ 149 (281)
T 3zv4_A 76 AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN------ 149 (281)
T ss_dssp HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS------
T ss_pred hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC------
Confidence 78999999998542111 11245689999999998888764321 11389999997765421
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCc-H-----H--HHHHHHHcCCceeEEe
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMA-Y-----F--FFTRDIIRGKRITVYE 289 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~-~-----~--~~~~~~~~~~~~~~~~ 289 (424)
.....|++||++.+.+++.++.++ ++++++|+||.|..+....... . . .+...+....+
T Consensus 150 ------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----- 218 (281)
T 3zv4_A 150 ------GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLP----- 218 (281)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCT-----
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCC-----
Confidence 345789999999999999999875 4999999999998874321100 0 0 01122222211
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
...+...+|+|.+++.++..+.... ..|+++++.+|..
T Consensus 219 -------~~r~~~pedvA~~v~fL~s~~~~~~---------itG~~i~vdGG~~ 256 (281)
T 3zv4_A 219 -------IGRMPALEEYTGAYVFFATRGDSLP---------ATGALLNYDGGMG 256 (281)
T ss_dssp -------TSSCCCGGGGSHHHHHHHSTTTSTT---------CSSCEEEESSSGG
T ss_pred -------CCCCCCHHHHHHHHHHhhccccccc---------ccCcEEEECCCCc
Confidence 1236778999999999887333211 3458999988753
No 275
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=99.92 E-value=7.1e-25 Score=202.70 Aligned_cols=225 Identities=12% Similarity=0.039 Sum_probs=153.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--Ccc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--AFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--~~d 156 (424)
+|+|+||||+|+||++++++|+++|++|++++|+.+.... . +.+|++|.+++++++++. ++|
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------------~-~~~Dl~~~~~v~~~~~~~~~~id 64 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------------D-LSTAEGRKQAIADVLAKCSKGMD 64 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------------C-TTSHHHHHHHHHHHHTTCTTCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------------c-cccCCCCHHHHHHHHHHhCCCCC
Confidence 3689999999999999999999999999999996543211 1 568999999999999875 679
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCC-----C------
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSE-----K------ 221 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e-----~------ 221 (424)
+||||||.... ....+..+++|+.|+.++++++. +.+. ++||++||...+......+..+ .
T Consensus 65 ~lv~~Ag~~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (257)
T 1fjh_A 65 GLVLCAGLGPQ---TKVLGNVVSVNYFGATELMDAFLPALKKGHQ-PAAVVISSVASAHLAFDKNPLALALEAGEEAKAR 140 (257)
T ss_dssp EEEECCCCCTT---CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSS-CEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHH
T ss_pred EEEECCCCCCC---cccHHHHHHHhhHHHHHHHHHHHHHHhhcCC-cEEEEECChhhhccccccchhhhhhcccchhhhh
Confidence 99999997541 23478899999999999888875 3343 4999999988873211000000 0
Q ss_pred -----CCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCC
Q 042406 222 -----DRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 222 -----~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
..+..+...|+.||++.+.+++.++.+ .|+++++|+||.|.++..... ............ +
T Consensus 141 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~~-----~----- 209 (257)
T 1fjh_A 141 AIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG-LQDPRYGESIAK-----F----- 209 (257)
T ss_dssp HHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------------C-----
T ss_pred hhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh-ccchhHHHHHHh-----c-----
Confidence 011124578999999999999998876 489999999999998743211 000000000000 0
Q ss_pred CccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcc
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPV 344 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 344 (424)
......+++++|+|++++.++..+... ..|+.|++.+|...
T Consensus 210 ~~~~~~~~~~~dvA~~~~~l~~~~~~~----------~tG~~~~vdgG~~~ 250 (257)
T 1fjh_A 210 VPPMGRRAEPSEMASVIAFLMSPAASY----------VHGAQIVIDGGIDA 250 (257)
T ss_dssp CCSTTSCCCTHHHHHHHHHHTSGGGTT----------CCSCEEEESTTHHH
T ss_pred ccccCCCCCHHHHHHHHHHHhCchhcC----------CcCCEEEECCCccc
Confidence 011124789999999999998765321 34589999887543
No 276
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=99.92 E-value=8.5e-24 Score=193.02 Aligned_cols=204 Identities=11% Similarity=-0.000 Sum_probs=140.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
+.+|+||||||+|+||++|+++|+++| ++|++++|+.+... .....++.++.+|++|.+++.++++++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~---------~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 89 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH---------KPYPTNSQIIMGDVLNHAALKQAMQGQ-- 89 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSC---------SSCCTTEEEEECCTTCHHHHHHHHTTC--
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhc---------ccccCCcEEEEecCCCHHHHHHHhcCC--
Confidence 456889999999999999999999999 89999999654321 123357999999999999999999977
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHH
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATK 235 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK 235 (424)
|+|||||+.... ...+.+++++|++.+.+ +||++||.++|+............ ....+...+
T Consensus 90 D~vv~~a~~~~~--------------~~~~~~~~~~~~~~~~~-~iV~iSS~~~~~~~~~~~~~~~~~---~~~~~~~~~ 151 (236)
T 3qvo_A 90 DIVYANLTGEDL--------------DIQANSVIAAMKACDVK-RLIFVLSLGIYDEVPGKFVEWNNA---VIGEPLKPF 151 (236)
T ss_dssp SEEEEECCSTTH--------------HHHHHHHHHHHHHTTCC-EEEEECCCCC-------------------CGGGHHH
T ss_pred CEEEEcCCCCch--------------hHHHHHHHHHHHHcCCC-EEEEEecceecCCCCcccccchhh---cccchHHHH
Confidence 999999985221 13467899999999876 999999999998643322111110 111222334
Q ss_pred HHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhh
Q 042406 236 KAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLD 315 (424)
Q Consensus 236 ~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 315 (424)
..+|..+ +..|+++++||||.++++.... ..... ........+++++|+|++++.++.
T Consensus 152 ~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~----------------~~~~~--~~~~~~~~~i~~~DvA~~i~~ll~ 209 (236)
T 3qvo_A 152 RRAADAI----EASGLEYTILRPAWLTDEDIID----------------YELTS--RNEPFKGTIVSRKSVAALITDIID 209 (236)
T ss_dssp HHHHHHH----HTSCSEEEEEEECEEECCSCCC----------------CEEEC--TTSCCSCSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHH----HHCCCCEEEEeCCcccCCCCcc----------------eEEec--cCCCCCCcEECHHHHHHHHHHHHc
Confidence 4444433 2459999999999999874321 11110 111112358999999999999998
Q ss_pred hccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 316 TAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
++... .+++|+++++.
T Consensus 210 ~~~~~-----------~g~~~~i~~~~ 225 (236)
T 3qvo_A 210 KPEKH-----------IGENIGINQPG 225 (236)
T ss_dssp STTTT-----------TTEEEEEECSS
T ss_pred Ccccc-----------cCeeEEecCCC
Confidence 87632 23899999865
No 277
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=99.92 E-value=1.3e-23 Score=193.75 Aligned_cols=221 Identities=13% Similarity=0.046 Sum_probs=158.7
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
.+++||++|||||+++||+++++.|+++|++|++.+|+... ......++++|++|+++++++++.+
T Consensus 7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~-------------~~~~~~~~~~Dv~~~~~v~~~~~~~~ 73 (261)
T 4h15_A 7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPE-------------GLPEELFVEADLTTKEGCAIVAEATR 73 (261)
T ss_dssp CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCT-------------TSCTTTEEECCTTSHHHHHHHHHHHH
T ss_pred cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchh-------------CCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 36799999999999999999999999999999999996431 1123457899999999998888765
Q ss_pred ----CccEEEEcccccCc------hhhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCC
Q 042406 154 ----AFTHVMHLAAQAGV------RYAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFS 219 (424)
Q Consensus 154 ----~~d~vi~~Ag~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~ 219 (424)
++|++|||||.... ....++.+..+++|+.|+.++.+++ ++.+.+ +||++||...+-..
T Consensus 74 ~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G-~Iv~isS~~~~~~~------ 146 (261)
T 4h15_A 74 QRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSG-VVVHVTSIQRVLPL------ 146 (261)
T ss_dssp HHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCGGGTSCC------
T ss_pred HHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCc-eEEEEEehhhccCC------
Confidence 68999999997432 1123344679999999987776654 444544 89999997654311
Q ss_pred CCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC-----------C-CcHHHHHHHHHcCCc
Q 042406 220 EKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP-----------D-MAYFFFTRDIIRGKR 284 (424)
Q Consensus 220 e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~-----------~-~~~~~~~~~~~~~~~ 284 (424)
......|++||.+.+.+++.++.++ ||++++|.||.|-.|.... + .....+.......-|
T Consensus 147 -----~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 221 (261)
T 4h15_A 147 -----PESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIP 221 (261)
T ss_dssp -----TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCT
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCC
Confidence 0234789999999999999999875 8999999999997752110 0 000011111111111
Q ss_pred eeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 285 ITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 285 ~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
+ .-+...+|+|.+++.++...... ..|+++.|.+|-
T Consensus 222 l------------gR~g~peevA~~v~fLaS~~a~~----------itG~~i~VDGG~ 257 (261)
T 4h15_A 222 L------------GRPAKPEEVANLIAFLASDRAAS----------ITGAEYTIDGGT 257 (261)
T ss_dssp T------------SSCBCHHHHHHHHHHHHSGGGTT----------CCSCEEEESTTC
T ss_pred C------------CCCcCHHHHHHHHHHHhCchhcC----------ccCcEEEECCcC
Confidence 1 11667899999999888655432 455899998875
No 278
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=99.92 E-value=7.2e-24 Score=194.75 Aligned_cols=208 Identities=16% Similarity=0.143 Sum_probs=155.6
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccC--CCHHHHHHHhh
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI--NDKSLLDKIFN 151 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~~~v~~~~~ 151 (424)
+..+++|+++||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|+ +|.+++.++++
T Consensus 9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~d~d~~~~~~~~~~~~ 86 (247)
T 3i1j_A 9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKS--AGQPQPLIIALNLENATAQQYRELAA 86 (247)
T ss_dssp TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHh--cCCCCceEEEeccccCCHHHHHHHHH
Confidence 3457899999999999999999999999999999999976554443333222 2235677888887 99999988887
Q ss_pred cc-----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCC
Q 042406 152 VV-----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVP 217 (424)
Q Consensus 152 ~~-----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~ 217 (424)
.+ ++|+||||||..... ...++.+..+++|+.|+.++++++. +.+. .+||++||...+..
T Consensus 87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~~iv~isS~~~~~~----- 160 (247)
T 3i1j_A 87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSED-ASIAFTSSSVGRKG----- 160 (247)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSS-EEEEEECCGGGTSC-----
T ss_pred HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCC-CeEEEEcchhhcCC-----
Confidence 65 689999999985321 1223446789999999999988873 3443 38999999776542
Q ss_pred CCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCC
Q 042406 218 FSEKDRTDQPASLYAATKKAGEAIAHAYNHIY----GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDG 293 (424)
Q Consensus 218 ~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (424)
..+...|+.||++.+.+++.++.++ ++++++|+||.|..+ +.......
T Consensus 161 -------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~----------~~~~~~~~----------- 212 (247)
T 3i1j_A 161 -------RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTG----------MRAQAYPD----------- 212 (247)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSH----------HHHHHSTT-----------
T ss_pred -------CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCc----------cchhcccc-----------
Confidence 1445789999999999999998774 799999999998765 22221111
Q ss_pred CccccccccHHHHHHHHHHHhhhcc
Q 042406 294 ASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 294 ~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
.....+...+|+|++++.++....
T Consensus 213 -~~~~~~~~p~dva~~~~~l~s~~~ 236 (247)
T 3i1j_A 213 -ENPLNNPAPEDIMPVYLYLMGPDS 236 (247)
T ss_dssp -SCGGGSCCGGGGTHHHHHHHSGGG
T ss_pred -cCccCCCCHHHHHHHHHHHhCchh
Confidence 112236678999999999887654
No 279
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=99.92 E-value=1.5e-23 Score=196.84 Aligned_cols=212 Identities=14% Similarity=0.102 Sum_probs=155.9
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhh---hHHHHHhh-hhccCCeEEEEccCCCHHHHHHHh
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET---SLKKARKG-LLERAGVFVIDADINDKSLLDKIF 150 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~ 150 (424)
+++++|+++||||+|+||++++++|+++|++|++++|+.+..+. .......+ .....++.++++|++|.+++++++
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 35789999999999999999999999999999999998764222 11111111 112457899999999999999998
Q ss_pred hcc-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC---CCCeEEEecCCcccCCCCCCCC
Q 042406 151 NVV-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD---PQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 151 ~~~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~---~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
+.+ ++|+||||||...... ..++.+..+++|+.|+.++++++.... ...+||++||...+...
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~----- 159 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK----- 159 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-----
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-----
Confidence 865 7899999999865422 222345788999999999999886552 12499999997665421
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEecc-ccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFT-VYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
..+...|++||++.+.+++.++.+ .|+++++|+||. +-.+ +.........
T Consensus 160 ------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~----------~~~~~~~~~~---------- 213 (285)
T 3sc4_A 160 ------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA----------AVQNLLGGDE---------- 213 (285)
T ss_dssp ------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH----------HHHHHHTSCC----------
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH----------HHHhhccccc----------
Confidence 023478999999999999999987 489999999994 4332 2333332211
Q ss_pred ccccccccHHHHHHHHHHHhhhcc
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
....+...+|+|++++.++....
T Consensus 214 -~~~r~~~pedvA~~~~~l~s~~~ 236 (285)
T 3sc4_A 214 -AMARSRKPEVYADAAYVVLNKPS 236 (285)
T ss_dssp -CCTTCBCTHHHHHHHHHHHTSCT
T ss_pred -cccCCCCHHHHHHHHHHHhCCcc
Confidence 11236788999999999987664
No 280
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=99.91 E-value=3e-24 Score=196.71 Aligned_cols=210 Identities=14% Similarity=0.087 Sum_probs=156.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
+.++|+++||||+|+||++++++|+++|++|++++|+.+... ....++.+|++|.++++++++.+
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~~D~~~~~~v~~~~~~~~~ 70 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------------SASVIVKMTDSFTEQADQVTAEVGK 70 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-------------SEEEECCCCSCHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-------------CCcEEEEcCCCCHHHHHHHHHHHHH
Confidence 356889999999999999999999999999999999764321 13577899999999998888742
Q ss_pred -----CccEEEEcccccCch-----hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVR-----YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~-----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||..... ...++.+..+++|+.++.++++++.+... ..+||++||...+...
T Consensus 71 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------- 141 (241)
T 1dhr_A 71 LLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT--------- 141 (241)
T ss_dssp HHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---------
T ss_pred HhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC---------
Confidence 679999999975422 22334467899999999999998876421 1389999998776421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh-----CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY-----GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.+...|+.||.+.+.+++.++.++ |+++++|+||.|-++ +....... ...
T Consensus 142 ---~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~----------~~~~~~~~------------~~~ 196 (241)
T 1dhr_A 142 ---PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP----------MNRKSMPE------------ADF 196 (241)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH----------HHHHHSTT------------SCG
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCc----------cccccCcc------------hhh
Confidence 345789999999999999998764 599999999998765 11111111 112
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..++..+|+|++++.++...... ..|+.+.+.++.
T Consensus 197 ~~~~~~~~vA~~v~~l~~~~~~~----------~~G~~~~v~g~~ 231 (241)
T 1dhr_A 197 SSWTPLEFLVETFHDWITGNKRP----------NSGSLIQVVTTD 231 (241)
T ss_dssp GGSEEHHHHHHHHHHHHTTTTCC----------CTTCEEEEEEET
T ss_pred ccCCCHHHHHHHHHHHhcCCCcC----------ccceEEEEeCCC
Confidence 34677899999999888654322 344788887644
No 281
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=99.91 E-value=2.2e-23 Score=200.57 Aligned_cols=211 Identities=13% Similarity=0.101 Sum_probs=155.8
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhh---HHHHHhh-hhccCCeEEEEccCCCHHHHHHH
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS---LKKARKG-LLERAGVFVIDADINDKSLLDKI 149 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~ 149 (424)
..++++|++|||||+|+||++++++|+++|++|++++|+.+..... ......+ .....++.++.+|++|.++++++
T Consensus 40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~ 119 (346)
T 3kvo_A 40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA 119 (346)
T ss_dssp CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence 3467899999999999999999999999999999999987653210 1111111 11235789999999999999999
Q ss_pred hhcc-----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCC
Q 042406 150 FNVV-----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKV 216 (424)
Q Consensus 150 ~~~~-----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~ 216 (424)
++.+ ++|+||||||...... ..++.+..+++|+.|+.++++++.. .+. .+||++||...+...
T Consensus 120 ~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~-g~IV~iSS~~~~~~~--- 195 (346)
T 3kvo_A 120 VEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKV-AHILNISPPLNLNPV--- 195 (346)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSS-CEEEEECCCCCCCGG---
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCC-CEEEEECCHHHcCCC---
Confidence 8865 7899999999865322 1233467899999999999888743 343 399999997766421
Q ss_pred CCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 217 PFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 217 ~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
...+...|+.||++.+.+++.++.++ |+++++|+||.+... .+.+.+ .+.
T Consensus 196 -------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T---------~~~~~~-~~~----------- 247 (346)
T 3kvo_A 196 -------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHT---------AAMDML-GGP----------- 247 (346)
T ss_dssp -------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCC---------HHHHHH-CC------------
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCcccc---------HHHHhh-ccc-----------
Confidence 01345789999999999999999875 799999999964332 122222 111
Q ss_pred ccccccccHHHHHHHHHHHhhh
Q 042406 295 SVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
.....+..++|+|++++.++..
T Consensus 248 ~~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 248 GIESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp -CGGGCBCTHHHHHHHHHHHTS
T ss_pred cccccCCCHHHHHHHHHHHHhc
Confidence 1123467889999999999987
No 282
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=99.91 E-value=3.1e-23 Score=194.83 Aligned_cols=208 Identities=16% Similarity=0.153 Sum_probs=154.5
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+..+++|+|+||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|.++++++++.+
T Consensus 23 ~~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~v~~~~~~~ 100 (286)
T 1xu9_A 23 PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLE--LGAASAHYIAGTMEDMTFAEQFVAQA 100 (286)
T ss_dssp GGGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HTCSEEEEEECCTTCHHHHHHHHHHH
T ss_pred hhhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH--hCCCceEEEeCCCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999999976544332222111 12246899999999999999888754
Q ss_pred -----CccEEEEc-ccccCchhh---ccChHHHHHHHHHHHHHHHHHHHhc---CCCCeEEEecCCcccCCCCCCCCCCC
Q 042406 154 -----AFTHVMHL-AAQAGVRYA---MQNPNSYVESNIAGFVNLLETCKSS---DPQPAIVWASSSSVYGVNKKVPFSEK 221 (424)
Q Consensus 154 -----~~d~vi~~-Ag~~~~~~~---~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~e~ 221 (424)
++|+|||| ||....... .++.+..+++|+.|+.++++++... +. ++||++||.+.+..
T Consensus 101 ~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~--------- 170 (286)
T 1xu9_A 101 GKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN-GSIVVVSSLAGKVA--------- 170 (286)
T ss_dssp HHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEGGGTSC---------
T ss_pred HHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCC-CEEEEECCcccccC---------
Confidence 67999999 566433211 2233578999999999988877442 22 39999999877642
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHh-----CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcc
Q 042406 222 DRTDQPASLYAATKKAGEAIAHAYNHIY-----GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASV 296 (424)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-----~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (424)
..+...|+.||++.+.+++.++.++ ++++++++||.|.++ +...... +..
T Consensus 171 ---~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~----------~~~~~~~------------~~~ 225 (286)
T 1xu9_A 171 ---YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE----------TAMKAVS------------GIV 225 (286)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH----------HHHHHSC------------GGG
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCCh----------hHHHhcc------------ccc
Confidence 1346789999999999999988765 899999999999765 1111111 112
Q ss_pred ccccccHHHHHHHHHHHhhhcc
Q 042406 297 ARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 297 ~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
...+++.+|+|++++.+++...
T Consensus 226 ~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 226 HMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp GGGCBCHHHHHHHHHHHHHTTC
T ss_pred cCCCCCHHHHHHHHHHHHhcCC
Confidence 2357899999999999887654
No 283
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=99.91 E-value=2e-23 Score=191.96 Aligned_cols=213 Identities=15% Similarity=0.115 Sum_probs=155.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc--
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV-- 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~-- 153 (424)
.+++|+++||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 80 (247)
T 2jah_A 4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA---AGAKVHVLELDVADRQGVDAAVASTVE 80 (247)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh---cCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 36789999999999999999999999999999999975443332222211 1357899999999999999888754
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||...... ..++.+..+++|+.|+.++++++.. .+ .+||++||...+..
T Consensus 81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~---------- 148 (247)
T 2jah_A 81 ALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVN---------- 148 (247)
T ss_dssp HHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTCC----------
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcCC----------
Confidence 6799999999754321 2223467899999999988887643 34 39999999876542
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccc
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARD 299 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (424)
..+...|++||++.+.+++.++.++ |+++++|+||.|.++....... ... ....... + ....
T Consensus 149 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~-~~~~~~~-------~----~~~~ 213 (247)
T 2jah_A 149 --VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TAT-KEMYEQR-------I----SQIR 213 (247)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHH-HHHHHHH-------T----TTSC
T ss_pred --CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhh-HHHHHhc-------c----cccC
Confidence 1345789999999999999998764 8999999999998874321100 111 1111100 0 0111
Q ss_pred cccHHHHHHHHHHHhhhcc
Q 042406 300 FTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 300 ~i~v~Dva~a~~~~~~~~~ 318 (424)
+++.+|+|++++.++..+.
T Consensus 214 ~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 214 KLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp CBCHHHHHHHHHHHHHSCT
T ss_pred CCCHHHHHHHHHHHhCCCc
Confidence 5889999999999987654
No 284
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=99.91 E-value=1e-23 Score=196.36 Aligned_cols=228 Identities=11% Similarity=0.037 Sum_probs=161.0
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGA--AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg--~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
.+++|+++|||| +|+||++++++|+++|++|++++|+.+.. ....... . ..++.++.+|++|.++++++++.+
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~---~~~~~~~-~-~~~~~~~~~Dv~~~~~v~~~~~~~ 78 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRL---IQRITDR-L-PAKAPLLELDVQNEEHLASLAGRV 78 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHH---HHHHHTT-S-SSCCCEEECCTTCHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHH---HHHHHHh-c-CCCceEEEccCCCHHHHHHHHHHH
Confidence 467899999999 99999999999999999999999965421 1111111 1 246889999999999999988854
Q ss_pred --------CccEEEEcccccCc------h---hhccChHHHHHHHHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCC
Q 042406 154 --------AFTHVMHLAAQAGV------R---YAMQNPNSYVESNIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKK 215 (424)
Q Consensus 154 --------~~d~vi~~Ag~~~~------~---~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~ 215 (424)
++|+||||||.... . ...++.+..+++|+.|+.++++++..... ..+||++||.+.++.
T Consensus 79 ~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~~--- 155 (269)
T 2h7i_A 79 TEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM--- 155 (269)
T ss_dssp HHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC---
T ss_pred HHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccccc---
Confidence 67999999997641 1 12233456899999999999999876421 138999999765431
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCC------CCcH----HHHHHHHHcC
Q 042406 216 VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRP------DMAY----FFFTRDIIRG 282 (424)
Q Consensus 216 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~------~~~~----~~~~~~~~~~ 282 (424)
.....|++||++.+.+++.++.++ |+++++|+||.|..+.... .... ..+...+...
T Consensus 156 ----------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (269)
T 2h7i_A 156 ----------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR 225 (269)
T ss_dssp ----------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHH
T ss_pred ----------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhcc
Confidence 345789999999999999998775 8999999999997752100 0000 0001111111
Q ss_pred CceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 283 KRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.+. + +.+...+|+|++++.++...... ..|+++++.+|.
T Consensus 226 ~p~--------~---rr~~~p~dvA~~v~~L~s~~~~~----------itG~~i~vdGG~ 264 (269)
T 2h7i_A 226 API--------G---WNMKDATPVAKTVCALLSDWLPA----------TTGDIIYADGGA 264 (269)
T ss_dssp CTT--------C---CCTTCCHHHHHHHHHHHSSSCTT----------CCSEEEEESTTG
T ss_pred CCc--------c---cCCCCHHHHHHHHHHHhCchhcc----------CcceEEEecCCe
Confidence 111 0 02567899999999988654322 445899998774
No 285
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=99.91 E-value=6.2e-23 Score=194.77 Aligned_cols=213 Identities=15% Similarity=0.069 Sum_probs=151.4
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCH-HHHHHHhhc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDK-SLLDKIFNV 152 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~v~~~~~~ 152 (424)
+.+.++|+||||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|. ++++++++.
T Consensus 7 ~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~Dl~~~~~~v~~~~~~ 84 (311)
T 3o26_A 7 NTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKN--SNHENVVFHQLDVTDPIATMSSLADF 84 (311)
T ss_dssp -----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT--TTCCSEEEEECCTTSCHHHHHHHHHH
T ss_pred CccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCCceEEEEccCCCcHHHHHHHHHH
Confidence 3456789999999999999999999999999999999987655444333322 2335799999999998 888887774
Q ss_pred c-----CccEEEEcccccCch----------------------------------hhccChHHHHHHHHHHHHHHHHHHH
Q 042406 153 V-----AFTHVMHLAAQAGVR----------------------------------YAMQNPNSYVESNIAGFVNLLETCK 193 (424)
Q Consensus 153 ~-----~~d~vi~~Ag~~~~~----------------------------------~~~~~~~~~~~~N~~g~~~ll~a~~ 193 (424)
+ ++|+||||||+.... ...++.+..+++|+.|+.++++++.
T Consensus 85 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 164 (311)
T 3o26_A 85 IKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLI 164 (311)
T ss_dssp HHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred HHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhh
Confidence 4 689999999986421 1122335679999999888887764
Q ss_pred h----cCCCCeEEEecCCcccCCCCCC-------------------------------CCCCCCCCCCCCChHHHHHHHH
Q 042406 194 S----SDPQPAIVWASSSSVYGVNKKV-------------------------------PFSEKDRTDQPASLYAATKKAG 238 (424)
Q Consensus 194 ~----~~~~~~~v~~SS~~vyg~~~~~-------------------------------~~~e~~~~~~~~~~Y~~sK~~~ 238 (424)
. .+. .+||++||...+...... ...+......+...|++||++.
T Consensus 165 ~~l~~~~~-~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~ 243 (311)
T 3o26_A 165 PLLQLSDS-PRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACL 243 (311)
T ss_dssp HHHTTSSS-CEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHH
T ss_pred HhhccCCC-CeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHH
Confidence 3 333 499999997664321100 0001111113457899999999
Q ss_pred HHHHHHHHHHh-CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 239 EAIAHAYNHIY-GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 239 e~~~~~~~~~~-~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
+.+++.++.++ ++++++|+||.|.++.... ......++.++.++.++..+
T Consensus 244 ~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~-----------------------------~~~~~~~~~a~~~~~~~~~~ 294 (311)
T 3o26_A 244 NAYTRVLANKIPKFQVNCVCPGLVKTEMNYG-----------------------------IGNYTAEEGAEHVVRIALFP 294 (311)
T ss_dssp HHHHHHHHHHCTTSEEEEECCCSBCSGGGTT-----------------------------CCSBCHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHhhcCCceEEEecCCceecCCcCC-----------------------------CCCCCHHHHHHHHHHHHhCC
Confidence 99999999886 7999999999998762211 01246789999999887765
Q ss_pred c
Q 042406 318 K 318 (424)
Q Consensus 318 ~ 318 (424)
.
T Consensus 295 ~ 295 (311)
T 3o26_A 295 D 295 (311)
T ss_dssp S
T ss_pred C
Confidence 4
No 286
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=99.91 E-value=7.4e-23 Score=191.04 Aligned_cols=209 Identities=14% Similarity=0.122 Sum_probs=152.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhh---HHHHHhh-hhccCCeEEEEccCCCHHHHHHHhh
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS---LKKARKG-LLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
++++|+++||||+|+||++++++|+++|++|++++|+.+..+.. ....... .....++.++.+|++|.++++++++
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 46889999999999999999999999999999999987642211 1111111 1124578999999999999999888
Q ss_pred cc-----CccEEEEcccccCchhh----ccChHHHHHHHHHHHHHHHHHHHh----cCCCCeEEEecCCcccCCCCCCCC
Q 042406 152 VV-----AFTHVMHLAAQAGVRYA----MQNPNSYVESNIAGFVNLLETCKS----SDPQPAIVWASSSSVYGVNKKVPF 218 (424)
Q Consensus 152 ~~-----~~d~vi~~Ag~~~~~~~----~~~~~~~~~~N~~g~~~ll~a~~~----~~~~~~~v~~SS~~vyg~~~~~~~ 218 (424)
.+ ++|+||||||....... .++.+..+++|+.|+.++++++.. .+. .+||++||...+....
T Consensus 83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~-g~iv~isS~~~~~~~~---- 157 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPN-PHILTLAPPPSLNPAW---- 157 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSS-CEEEECCCCCCCCHHH----
T ss_pred HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCC-ceEEEECChHhcCCCC----
Confidence 65 68999999998643222 223457899999999988887643 333 4999999977654210
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEecc-ccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCC
Q 042406 219 SEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFT-VYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGA 294 (424)
Q Consensus 219 ~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (424)
..+...|++||++.+.+++.++.++ |+++++|+||. +-.+.. ....+
T Consensus 158 ------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~-----------~~~~~------------ 208 (274)
T 3e03_A 158 ------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI-----------NMLPG------------ 208 (274)
T ss_dssp ------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------C------------
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh-----------hhccc------------
Confidence 1235679999999999999998775 89999999995 443311 11111
Q ss_pred ccccccccHHHHHHHHHHHhhhcc
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
.....+...+|+|++++.++....
T Consensus 209 ~~~~~~~~pedvA~~v~~l~s~~~ 232 (274)
T 3e03_A 209 VDAAACRRPEIMADAAHAVLTREA 232 (274)
T ss_dssp CCGGGSBCTHHHHHHHHHHHTSCC
T ss_pred ccccccCCHHHHHHHHHHHhCccc
Confidence 112237789999999999987654
No 287
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=99.90 E-value=7e-23 Score=189.07 Aligned_cols=221 Identities=12% Similarity=0.066 Sum_probs=150.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV----- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~----- 153 (424)
+|+++||||+|+||++++++|+++|++|++++|+.+..+.... ... ...++.++ |..+ ++++++.+
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~---~~~~~~~~--d~~~---v~~~~~~~~~~~g 71 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAE---TYPQLKPM--SEQE---PAELIEAVTSAYG 71 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHH---HCTTSEEC--CCCS---HHHHHHHHHHHHS
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHh---cCCcEEEE--CHHH---HHHHHHHHHHHhC
Confidence 3689999999999999999999999999999997654433221 111 12334443 4444 44444432
Q ss_pred CccEEEEccccc-Cch----hhccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQA-GVR----YAMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 ~~d~vi~~Ag~~-~~~----~~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||.. ... ...++.+..+++|+.|+.++++++. +.+.+ +||++||...+...
T Consensus 72 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~~----------- 139 (254)
T 1zmt_A 72 QVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSG-HIIFITSATPFGPW----------- 139 (254)
T ss_dssp CCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCC-EEEEECCSTTTSCC-----------
T ss_pred CCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCc-EEEEECCcccccCC-----------
Confidence 679999999986 321 1223346799999999998888764 34433 99999998776421
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHH------HHHHHHHcCCceeEEecCCCCc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYF------FFTRDIIRGKRITVYEAPDGAS 295 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 295 (424)
.+...|+.||.+.+.+++.++.++ |+++++|+||.|+||........+ .....+....+
T Consensus 140 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p----------- 207 (254)
T 1zmt_A 140 -KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTA----------- 207 (254)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSS-----------
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCC-----------
Confidence 345789999999999999998775 899999999999887543211111 11111111111
Q ss_pred cccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCc
Q 042406 296 VARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTP 343 (424)
Q Consensus 296 ~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 343 (424)
...+.+.+|+|++++.++...... ..|+++++.+|..
T Consensus 208 -~~~~~~p~dvA~~v~~l~s~~~~~----------~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 208 -LQRLGTQKELGELVAFLASGSCDY----------LTGQVFWLAGGFP 244 (254)
T ss_dssp -SSSCBCHHHHHHHHHHHHTTSCGG----------GTTCEEEESTTCC
T ss_pred -CCCCcCHHHHHHHHHHHhCcccCC----------ccCCEEEECCCch
Confidence 112678999999999988765432 3448999988753
No 288
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=99.90 E-value=3.7e-23 Score=191.49 Aligned_cols=216 Identities=13% Similarity=0.081 Sum_probs=153.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHh---CCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKK---RGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
++++|+++||||+|+||++++++|++ +|++|++++|+.+............ ....++.++.+|++|.++++++++.
T Consensus 3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (259)
T 1oaa_A 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ-QPDLKVVLAAADLGTEAGVQRLLSA 81 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHH-CTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhh-CCCCeEEEEecCCCCHHHHHHHHHH
Confidence 46789999999999999999999999 8999999999765433332222111 1134689999999999999888765
Q ss_pred c-------Ccc--EEEEcccccCc--h-----hhccChHHHHHHHHHHHHHHHHHHHhcCC-----CCeEEEecCCcccC
Q 042406 153 V-------AFT--HVMHLAAQAGV--R-----YAMQNPNSYVESNIAGFVNLLETCKSSDP-----QPAIVWASSSSVYG 211 (424)
Q Consensus 153 ~-------~~d--~vi~~Ag~~~~--~-----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~-----~~~~v~~SS~~vyg 211 (424)
+ ++| +||||||.... . ...++.+..+++|+.|+.++++++..... ..+||++||...+.
T Consensus 82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~ 161 (259)
T 1oaa_A 82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ 161 (259)
T ss_dssp HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC
Confidence 4 457 99999998532 1 12234467999999999999998865432 13799999987764
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCcEEEEEeccccCCCCCCCC---cHHHHHHHHHcCCceeE
Q 042406 212 VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLRFFTVYGPWGRPDM---AYFFFTRDIIRGKRITV 287 (424)
Q Consensus 212 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~i~~~~vrp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~ 287 (424)
. ..+...|++||++.+.+++.++.++ ++++++|+||.|-.+...... ........+...
T Consensus 162 ~------------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----- 224 (259)
T 1oaa_A 162 P------------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL----- 224 (259)
T ss_dssp C------------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH-----
T ss_pred C------------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHh-----
Confidence 2 1345789999999999999999886 599999999998765210000 000000001000
Q ss_pred EecCCCCccccccccHHHHHHHHHHHhhh
Q 042406 288 YEAPDGASVARDFTYIDDIVKGCLAGLDT 316 (424)
Q Consensus 288 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~ 316 (424)
.....+.+++|+|++++.++..
T Consensus 225 -------~p~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 225 -------KSDGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp -------HHTTCSBCHHHHHHHHHHHHHH
T ss_pred -------hhcCCcCCHHHHHHHHHHHHhh
Confidence 0012377899999999998875
No 289
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=99.89 E-value=6.1e-23 Score=188.42 Aligned_cols=202 Identities=18% Similarity=0.187 Sum_probs=130.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHH---HHhhc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLD---KIFNV 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~---~~~~~ 152 (424)
++++|++|||||+|+||++++++|++ |+.|++++|+.+.... .. ...++.++.+|+++.+..+ +.++.
T Consensus 2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~----~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (245)
T 3e9n_A 2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAA----LA----EIEGVEPIESDIVKEVLEEGGVDKLKN 72 (245)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHH----HH----TSTTEEEEECCHHHHHHTSSSCGGGTT
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHH----HH----hhcCCcceecccchHHHHHHHHHHHHh
Confidence 35789999999999999999999987 9999999996432211 11 1356899999999876522 22222
Q ss_pred c-CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 153 V-AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 153 ~-~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
. ++|+||||||...... ..++.+..+++|+.|+.++++++. +.+ .+||++||...+...
T Consensus 73 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~---------- 140 (245)
T 3e9n_A 73 LDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPH---------- 140 (245)
T ss_dssp CSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC------------------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCC----------
Confidence 2 6799999999865432 223346789999999877777653 333 389999998877531
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCcccccc
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDF 300 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|.++.... +. .... .......+
T Consensus 141 --~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~------~~----~~~~--------~~~~~~~~ 200 (245)
T 3e9n_A 141 --PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQG------LM----DSQG--------TNFRPEIY 200 (245)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------------CCGGG
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhh------hh----hhhh--------cccccccC
Confidence 345789999999999999998764 8999999999999873321 11 0000 11112348
Q ss_pred ccHHHHHHHHHHHhhhcc
Q 042406 301 TYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 301 i~v~Dva~a~~~~~~~~~ 318 (424)
++++|+|++++.+++.+.
T Consensus 201 ~~p~dvA~~i~~l~~~~~ 218 (245)
T 3e9n_A 201 IEPKEIANAIRFVIDAGE 218 (245)
T ss_dssp SCHHHHHHHHHHHHTSCT
T ss_pred CCHHHHHHHHHHHHcCCC
Confidence 899999999999998765
No 290
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=99.89 E-value=2e-22 Score=200.52 Aligned_cols=225 Identities=17% Similarity=0.135 Sum_probs=160.3
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++|++|||||+|+||.++++.|+++|++|++++|+... ....... ...++.++.+|++|.++++++++.+
T Consensus 209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~--~~l~~~~----~~~~~~~~~~Dvtd~~~v~~~~~~~~ 282 (454)
T 3u0b_A 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA--EDLKRVA----DKVGGTALTLDVTADDAVDKITAHVT 282 (454)
T ss_dssp STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH--HHHHHHH----HHHTCEEEECCTTSTTHHHHHHHHHH
T ss_pred cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH--HHHHHHH----HHcCCeEEEEecCCHHHHHHHHHHHH
Confidence 34589999999999999999999999999999999985321 1111111 1125679999999999999888754
Q ss_pred -----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc----CCCCeEEEecCCcccCCCCCCCCCC
Q 042406 154 -----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS----DPQPAIVWASSSSVYGVNKKVPFSE 220 (424)
Q Consensus 154 -----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~----~~~~~~v~~SS~~vyg~~~~~~~~e 220 (424)
++|+||||||+..... ..++.+..+++|+.|+.++.+++... +. .+||++||.+.+...
T Consensus 283 ~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~-g~iV~iSS~a~~~g~------- 354 (454)
T 3u0b_A 283 EHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEG-GRVIGLSSMAGIAGN------- 354 (454)
T ss_dssp HHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTT-CEEEEECCHHHHHCC-------
T ss_pred HHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCC-CEEEEEeChHhCCCC-------
Confidence 3899999999865422 22334578999999999999998765 33 389999997654321
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccc
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVA 297 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (424)
.....|+++|.+.+.+++.++.++ |+++++|+||.|.++..... .......... ....
T Consensus 355 -----~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~-----------~~~l 415 (454)
T 3u0b_A 355 -----RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI---PLATREVGRR-----------LNSL 415 (454)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-------------CHHHHH-----------SBTT
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc---chhhHHHHHh-----------hccc
Confidence 346889999999999999988764 89999999999988743210 0000000000 0111
Q ss_pred cccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 298 RDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 298 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
..+...+|+|++++.++...... ..|+++++.++.
T Consensus 416 ~r~g~pedvA~~v~fL~s~~a~~----------itG~~i~vdGG~ 450 (454)
T 3u0b_A 416 FQGGQPVDVAELIAYFASPASNA----------VTGNTIRVCGQA 450 (454)
T ss_dssp SSCBCHHHHHHHHHHHHCGGGTT----------CCSCEEEESSSB
T ss_pred cCCCCHHHHHHHHHHHhCCccCC----------CCCcEEEECCcc
Confidence 22567899999999888755432 455899998865
No 291
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=99.88 E-value=9.2e-22 Score=185.81 Aligned_cols=233 Identities=13% Similarity=0.024 Sum_probs=153.3
Q ss_pred CCCCCeEEEEcCC--ChhHHHHHHHHHhCCCeEEEEeCCCCch--hhhHHHHHh---hhhccC----CeEEEEcc-----
Q 042406 76 STRGLTVLVTGAA--GFVGSHVSLALKKRGDGVLGLDNFNNYY--ETSLKKARK---GLLERA----GVFVIDAD----- 139 (424)
Q Consensus 76 ~~~~~~vlItGg~--G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~---~~~~~~----~v~~~~~D----- 139 (424)
++++|+++||||+ |+||++++++|+++|++|++++|+.... ...+..... ...... ....+.+|
T Consensus 5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T 1d7o_A 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence 4678999999999 9999999999999999999998742100 000000000 000001 12344443
Q ss_pred ---CC----C--------HHHHHHHhhcc-----CccEEEEcccccC---c---hhhccChHHHHHHHHHHHHHHHHHHH
Q 042406 140 ---IN----D--------KSLLDKIFNVV-----AFTHVMHLAAQAG---V---RYAMQNPNSYVESNIAGFVNLLETCK 193 (424)
Q Consensus 140 ---l~----d--------~~~v~~~~~~~-----~~d~vi~~Ag~~~---~---~~~~~~~~~~~~~N~~g~~~ll~a~~ 193 (424)
+. | .++++++++.+ ++|+||||||... . ....++.+..+++|+.|+.++++++.
T Consensus 85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 164 (297)
T 1d7o_A 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 22 2 44566665543 6799999999642 1 11233446799999999999999987
Q ss_pred hcCC-CCeEEEecCCcccCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHH----hCCcEEEEEeccccCCCCC
Q 042406 194 SSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTDQPA-SLYAATKKAGEAIAHAYNHI----YGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 194 ~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~~i~~~~vrp~~v~G~~~~ 267 (424)
.... ..+||++||...+... ... ..|++||++.+.+++.++.+ .|+++++|+||.|.+|...
T Consensus 165 ~~m~~~g~iv~isS~~~~~~~------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~ 232 (297)
T 1d7o_A 165 PIMNPGGASISLTYIASERII------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK 232 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSCC------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS
T ss_pred HHhccCceEEEEeccccccCC------------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhh
Confidence 6421 1389999997665321 223 57999999999999998765 4899999999999998654
Q ss_pred CCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 268 PDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
.......+...+....+. ..+.+++|+|++++.++...... ..|+++++.+|.
T Consensus 233 ~~~~~~~~~~~~~~~~p~------------~r~~~pedvA~~v~~l~s~~~~~----------itG~~i~vdgG~ 285 (297)
T 1d7o_A 233 AIGFIDTMIEYSYNNAPI------------QKTLTADEVGNAAAFLVSPLASA----------ITGATIYVDNGL 285 (297)
T ss_dssp CCSHHHHHHHHHHHHSSS------------CCCBCHHHHHHHHHHHTSGGGTT----------CCSCEEEESTTG
T ss_pred hccccHHHHHHhhccCCC------------CCCCCHHHHHHHHHHHhCccccC----------CCCCEEEECCCc
Confidence 322222333333222221 12568999999999888654322 344899998874
No 292
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=99.88 E-value=5.3e-22 Score=183.79 Aligned_cols=215 Identities=16% Similarity=0.084 Sum_probs=147.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
+++|+++||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.++++++++.+
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS---LGGQCVPVVCDSSQESEVRSLFEQVDRE 79 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH---HSSEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH---cCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999975443332222211 1346889999999999998887653
Q ss_pred ---CccEEEEccc--cc------Cc---hhhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCC
Q 042406 154 ---AFTHVMHLAA--QA------GV---RYAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKK 215 (424)
Q Consensus 154 ---~~d~vi~~Ag--~~------~~---~~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~ 215 (424)
++|+|||||| .. .. ....++.+..+++|+.++.++.+++ ++.+.+ +||++||...+..
T Consensus 80 ~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g-~iv~isS~~~~~~--- 155 (260)
T 2qq5_A 80 QQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQG-LIVVISSPGSLQY--- 155 (260)
T ss_dssp HTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCC-EEEEECCGGGTSC---
T ss_pred cCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCc-EEEEEcChhhcCC---
Confidence 5799999994 32 11 1112234578889999987766554 344444 9999999877642
Q ss_pred CCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCC
Q 042406 216 VPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPD 292 (424)
Q Consensus 216 ~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|.++..... ... ............
T Consensus 156 ----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~--~~~~~~~~~~~~---- 217 (260)
T 2qq5_A 156 ----------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEH--MAK--EEVLQDPVLKQF---- 217 (260)
T ss_dssp ----------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC--------------------------
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHh--hcc--ccccchhHHHHH----
Confidence 234789999999999999998764 89999999999988743210 000 000000000000
Q ss_pred CCccccccccHHHHHHHHHHHhhhc
Q 042406 293 GASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 293 ~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
.....-+...+|+|++++.++...
T Consensus 218 -~~~~~~~~~pe~va~~v~~l~s~~ 241 (260)
T 2qq5_A 218 -KSAFSSAETTELSGKCVVALATDP 241 (260)
T ss_dssp -----CHHHHHHHHHHHHHHHHTCT
T ss_pred -HhhhccCCCHHHHHHHHHHHhcCc
Confidence 000112467899999999988764
No 293
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=99.88 E-value=7.3e-22 Score=188.09 Aligned_cols=266 Identities=14% Similarity=0.063 Sum_probs=173.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCC---------CCchhhhHHHHHhhhhccCCeEEEEccCCCHHHH
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNF---------NNYYETSLKKARKGLLERAGVFVIDADINDKSLL 146 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~---------~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v 146 (424)
++++|+++||||+|+||+++++.|+++|++|++.+|. .+..+........ ... ...+|++|.+++
T Consensus 6 ~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~-----~~~-~~~~D~~~~~~~ 79 (319)
T 1gz6_A 6 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-----RGG-KAVANYDSVEAG 79 (319)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-----TTC-EEEEECCCGGGH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHh-----hCC-eEEEeCCCHHHH
Confidence 4688999999999999999999999999999998763 2222221111111 111 235899999887
Q ss_pred HHHhhcc-----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCc-ccCC
Q 042406 147 DKIFNVV-----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSS-VYGV 212 (424)
Q Consensus 147 ~~~~~~~-----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~-vyg~ 212 (424)
+++++.. ++|+||||||+.... ...++.+..+++|+.|+.++++++ ++.+.+ +||++||.+ .++.
T Consensus 80 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g-rIV~vsS~~~~~~~ 158 (319)
T 1gz6_A 80 EKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG-RIIMTASASGIYGN 158 (319)
T ss_dssp HHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE-EEEEECCHHHHHCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEECChhhccCC
Confidence 7776543 679999999986532 123345679999999988887776 444444 999999964 4542
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEe
Q 042406 213 NKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYE 289 (424)
Q Consensus 213 ~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.+ .+... . ..
T Consensus 159 -------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~-~-~~----------------- 205 (319)
T 1gz6_A 159 -------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE-T-VM----------------- 205 (319)
T ss_dssp -------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG-G-GS-----------------
T ss_pred -------------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc-c-cC-----------------
Confidence 345789999999999999998774 899999999987 33111 0 00
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHHhCcccccccccCC
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKILKVKAETKVLPLP 369 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~ 369 (424)
......+++.+|+|.+++.++..+.. ..|++|++.+|...... ..... -...+
T Consensus 206 ----~~~~~~~~~p~dvA~~~~~l~s~~~~-----------~tG~~~~v~GG~~~~~~---------~~~~~-~~~~~-- 258 (319)
T 1gz6_A 206 ----PEDLVEALKPEYVAPLVLWLCHESCE-----------ENGGLFEVGAGWIGKLR---------WERTL-GAIVR-- 258 (319)
T ss_dssp ----CHHHHHHSCGGGTHHHHHHHTSTTCC-----------CCSCEEEEETTEEEEEE---------EEECC-CEECC--
T ss_pred ----ChhhhccCCHHHHHHHHHHHhCchhh-----------cCCCEEEECCCeEEEEe---------eeecc-ceecc--
Confidence 01122356789999999988865322 23488998876421110 00000 00000
Q ss_pred CCCCcccccCChHHH-------HhHcCCcccCCHHHHHHHHHHHHHHHhc
Q 042406 370 RNGDVQFTHANISLA-------QRELGYMPTTDLETGLKKFVRWYLSYYN 412 (424)
Q Consensus 370 ~~~~~~~~~~d~s~~-------~~~LG~~p~~~l~~~l~~~v~~~~~~~~ 412 (424)
......|...+ .+..|+....++++.++..+++..+...
T Consensus 259 ----~~~~~~~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (319)
T 1gz6_A 259 ----KRNQPMTPEAVRDNWVKICDFSNASKPKSIQESTGGIIEVLHKIDS 304 (319)
T ss_dssp ----BTTBCCCHHHHHHTHHHHTCCTTCBCCCCHHHHHHHHHHHHHHHC-
T ss_pred ----CCCCCCCHHHHHHHHHHhhccccccCCCchHHHHHHHHHHHhhccc
Confidence 00112233332 2335776556899999999887766543
No 294
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=99.88 E-value=8.4e-22 Score=188.45 Aligned_cols=175 Identities=15% Similarity=0.136 Sum_probs=134.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhh---hhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKG---LLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
++|+|+||||+|+||++++++|+++|++|++++|+.+............ .....++.++.+|++|.++++++++.+
T Consensus 1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 3678999999999999999999999999999888655443322221110 011357899999999999999999875
Q ss_pred --CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCcccCCCCCCCCCCCCC
Q 042406 154 --AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVYGVNKKVPFSEKDR 223 (424)
Q Consensus 154 --~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~ 223 (424)
++|+||||||+..... ..++.+..+++|+.|+.++++++ ++.+.+ +||++||...+...
T Consensus 81 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g-~IV~isS~~~~~~~---------- 149 (327)
T 1jtv_A 81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSG-RVLVTGSVGGLMGL---------- 149 (327)
T ss_dssp TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEEEEGGGTSCC----------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-EEEEECCcccccCC----------
Confidence 5799999999754321 22334679999999999998875 444444 99999998765421
Q ss_pred CCCCCChHHHHHHHHHHHHHHHHHH---hCCcEEEEEeccccCCC
Q 042406 224 TDQPASLYAATKKAGEAIAHAYNHI---YGLSITGLRFFTVYGPW 265 (424)
Q Consensus 224 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~i~~~~vrp~~v~G~~ 265 (424)
.....|++||++.+.+++.++.+ .|+++++|+||.|.++.
T Consensus 150 --~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 150 --PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC--
T ss_pred --CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChH
Confidence 33578999999999999999876 48999999999998874
No 295
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=99.87 E-value=3.4e-21 Score=176.60 Aligned_cols=218 Identities=12% Similarity=0.011 Sum_probs=145.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEE-e--CCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHH-HHHHhhcc-
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGL-D--NFNNYYETSLKKARKGLLERAGVFVIDADINDKSL-LDKIFNVV- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~-v~~~~~~~- 153 (424)
+|+++||||+|+||++++++|+++|++|+++ + |+.+..... ..+ . .+..+. |..+.+. ++++.+..
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~----~~~-~--~~~~~~--~~~~v~~~~~~~~~~~g 71 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRF----ESE-N--PGTIAL--AEQKPERLVDATLQHGE 71 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHH----HHH-S--TTEEEC--CCCCGGGHHHHHGGGSS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHH----HHH-h--CCCccc--CHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999 5 864332221 111 1 122222 4443332 22333322
Q ss_pred CccEEEEcccccCc---hh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQAGV---RY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKD 222 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~---~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~ 222 (424)
++|+||||||.... .. ..++.+..+++|+.|+.++++++. +.+. .+||++||...+...
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~-g~iv~isS~~~~~~~--------- 141 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGG-ASVIFITSSVGKKPL--------- 141 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-EEEEEECCGGGTSCC---------
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-cEEEEECChhhCCCC---------
Confidence 67999999997543 11 123346799999999998888764 3443 389999998776421
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCC---CCCCcH-HHHHHHHHc-CCceeEEecCCCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWG---RPDMAY-FFFTRDIIR-GKRITVYEAPDGA 294 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~---~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~ 294 (424)
.+...|++||++.+.+++.++.++ |+++++|+||.|..+.. .. .. ......+.. ..+
T Consensus 142 ---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~~~p---------- 206 (244)
T 1zmo_A 142 ---AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSD--WENNPELRERVDRDVP---------- 206 (244)
T ss_dssp ---TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHH--HHHCHHHHHHHHHHCT----------
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccccc--ccchHHHHHHHhcCCC----------
Confidence 345789999999999999998774 89999999999987743 10 00 001111111 111
Q ss_pred ccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC
Q 042406 295 SVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT 342 (424)
Q Consensus 295 ~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 342 (424)
...+...+|+|++++.++...... ..|+.+.+.+|.
T Consensus 207 --~~r~~~pe~vA~~v~~l~s~~~~~----------~tG~~i~vdgG~ 242 (244)
T 1zmo_A 207 --LGRLGRPDEMGALITFLASRRAAP----------IVGQFFAFTGGY 242 (244)
T ss_dssp --TCSCBCHHHHHHHHHHHHTTTTGG----------GTTCEEEESTTC
T ss_pred --CCCCcCHHHHHHHHHHHcCccccC----------ccCCEEEeCCCC
Confidence 112678999999999988764432 334888888763
No 296
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=99.87 E-value=6.9e-21 Score=191.22 Aligned_cols=208 Identities=20% Similarity=0.166 Sum_probs=151.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEeCCCCchhhhHHHHHhh-hhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDG-VLGLDNFNNYYETSLKKARKG-LLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++||||||+|+||.+++++|+++|++ |++++|+....... .....+ .....++.++.+|++|.+++.++++++
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~-~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~ 302 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGA-GELVAELEALGARTTVAACDVTDRESVRELLGGIG 302 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTH-HHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHH-HHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 46789999999999999999999999995 99999975422111 111111 112357899999999999999999876
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc-cCCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV-YGVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v-yg~~~~~~~~e~~~~~ 225 (424)
++|+||||||+..... ..++.+..+++|+.|+.++.++++..+.+ +||++||.+. +|.
T Consensus 303 ~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~-~~V~~SS~a~~~g~------------- 368 (486)
T 2fr1_A 303 DDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLT-AFVLFSSFASAFGA------------- 368 (486)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCS-EEEEEEEHHHHTCC-------------
T ss_pred hcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCC-EEEEEcChHhcCCC-------------
Confidence 6799999999865321 22334568899999999999999887765 9999999644 442
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHH
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDD 305 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 305 (424)
.....|+++|...+.+.+++.. .|+++++|+||.+++++.... .. ...+ ...-..+++.+|
T Consensus 369 ~g~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~gm~~~---------~~----~~~~-----~~~g~~~i~~e~ 429 (486)
T 2fr1_A 369 PGLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG---------PV----ADRF-----RRHGVIEMPPET 429 (486)
T ss_dssp TTCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC-------------------------C-----TTTTEECBCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCcccch---------hH----HHHH-----HhcCCCCCCHHH
Confidence 3457899999999999887754 499999999999987632111 00 0001 011235799999
Q ss_pred HHHHHHHHhhhcc
Q 042406 306 IVKGCLAGLDTAK 318 (424)
Q Consensus 306 va~a~~~~~~~~~ 318 (424)
+++++..++....
T Consensus 430 ~a~~l~~~l~~~~ 442 (486)
T 2fr1_A 430 ACRALQNALDRAE 442 (486)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCC
Confidence 9999999998654
No 297
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=99.86 E-value=5.5e-20 Score=185.39 Aligned_cols=228 Identities=18% Similarity=0.137 Sum_probs=161.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..+++||||||+|+||.+++++|+++|+ +|++++|+....... .....+. ....++.++.||++|.+++.+++++.+
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~-~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ 335 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGA-AELAEELRGHGCEVVHAACDVAERDALAALVTAYP 335 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTH-HHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHH-HHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCC
Confidence 4678999999999999999999999999 588999975322111 1111111 123468999999999999999998756
Q ss_pred ccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCc-ccCCCCCCCCCCCCCCCCCC
Q 042406 155 FTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSS-DPQPAIVWASSSS-VYGVNKKVPFSEKDRTDQPA 228 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~-vyg~~~~~~~~e~~~~~~~~ 228 (424)
+|+||||||+..... ..++.+..+++|+.|+.++.+++... +.+ +||++||.+ ++|. ...
T Consensus 336 ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~-~~V~~SS~a~~~g~-------------~g~ 401 (511)
T 2z5l_A 336 PNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLD-AFVLFSSVTGTWGN-------------AGQ 401 (511)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCC-CEEEEEEGGGTTCC-------------TTB
T ss_pred CcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCC-EEEEEeCHHhcCCC-------------CCC
Confidence 799999999865421 12233568899999999999998876 544 899999964 4553 345
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHH
Q 042406 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVK 308 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 308 (424)
..|+++|...+.+++.+.. .|+++++|+||.+.+.+.... . ....+.. .-..+++.+|+++
T Consensus 402 ~~YaaaKa~ld~la~~~~~-~gi~v~sv~pG~~~~tgm~~~-~---~~~~~~~--------------~g~~~l~~e~~a~ 462 (511)
T 2z5l_A 402 GAYAAANAALDALAERRRA-AGLPATSVAWGLWGGGGMAAG-A---GEESLSR--------------RGLRAMDPDAAVD 462 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TTCCCEEEEECCBCSTTCCCC-H---HHHHHHH--------------HTBCCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCcEEEEECCcccCCccccc-c---cHHHHHh--------------cCCCCCCHHHHHH
Confidence 7899999999999988753 499999999998843322211 1 1111111 0123788999999
Q ss_pred HHHHHhhhccccCCCCCCCCCCCCcceEEcCCCCcccHHHHHHHHHHH
Q 042406 309 GCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTTPVPVSRLVSLLEKI 356 (424)
Q Consensus 309 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~el~~~i~~~ 356 (424)
++..++.... ..+.+. .+.+..+...+...
T Consensus 463 ~l~~al~~~~---------------~~v~v~---~~d~~~~~~~~~~~ 492 (511)
T 2z5l_A 463 ALLGAMGRND---------------VCVTVV---DVDWERFAPATNAI 492 (511)
T ss_dssp HHHHHHHHTC---------------SEEEEC---CBCHHHHHHHHHHH
T ss_pred HHHHHHhCCC---------------CEEEEE---eCCHHHHHhhhccc
Confidence 9999998764 234444 25677776655443
No 298
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=99.84 E-value=7.2e-20 Score=174.24 Aligned_cols=232 Identities=15% Similarity=0.040 Sum_probs=148.9
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEeCCCCc------hh-hhHHHHHhhhhccC---CeEEEEccC---
Q 042406 76 STRGLTVLVTGA--AGFVGSHVSLALKKRGDGVLGLDNFNNY------YE-TSLKKARKGLLERA---GVFVIDADI--- 140 (424)
Q Consensus 76 ~~~~~~vlItGg--~G~iG~~l~~~L~~~g~~V~~~~r~~~~------~~-~~~~~~~~~~~~~~---~v~~~~~Dl--- 140 (424)
++++|+++|||| +|+||++++++|+++|++|++++|+... .. ...... .+..... .+.++.+|+
T Consensus 6 ~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~~ 84 (315)
T 2o2s_A 6 DLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDAAFD 84 (315)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCTTCS
T ss_pred cCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhcccccccccccccccccc
Confidence 367899999999 8999999999999999999999974210 00 000001 1110011 134544443
Q ss_pred ---------CC--------HHHHHHHhhcc-----CccEEEEcccccC---ch---hhccChHHHHHHHHHHHHHHHHHH
Q 042406 141 ---------ND--------KSLLDKIFNVV-----AFTHVMHLAAQAG---VR---YAMQNPNSYVESNIAGFVNLLETC 192 (424)
Q Consensus 141 ---------~d--------~~~v~~~~~~~-----~~d~vi~~Ag~~~---~~---~~~~~~~~~~~~N~~g~~~ll~a~ 192 (424)
+| .++++++++.+ ++|+||||||... .. ...++.+..+++|+.|+.++++++
T Consensus 85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 164 (315)
T 2o2s_A 85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHF 164 (315)
T ss_dssp STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 32 44666666543 6799999999642 11 122334678999999999999998
Q ss_pred HhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHH----hCCcEEEEEeccccCCCC
Q 042406 193 KSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTDQPA-SLYAATKKAGEAIAHAYNHI----YGLSITGLRFFTVYGPWG 266 (424)
Q Consensus 193 ~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~~i~~~~vrp~~v~G~~~ 266 (424)
..... ..+||++||...+... ... ..|++||++.+.+++.++.+ .|+++++|+||.|..+..
T Consensus 165 ~~~m~~~g~Iv~isS~~~~~~~------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~ 232 (315)
T 2o2s_A 165 GPIMNEGGSAVTLSYLAAERVV------------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAA 232 (315)
T ss_dssp STTEEEEEEEEEEEEGGGTSCC------------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHH
T ss_pred HHHHhcCCEEEEEecccccccC------------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhh
Confidence 65421 1389999997765321 222 47999999999999998765 489999999999976521
Q ss_pred C------CCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCC
Q 042406 267 R------PDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGN 340 (424)
Q Consensus 267 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 340 (424)
. ...+...+...+....+. .-+...+|+|++++.++...... ..|+++.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~p~------------~r~~~pedvA~~v~~L~s~~~~~----------itG~~i~vdG 290 (315)
T 2o2s_A 233 SAIGKSGEKSFIDYAIDYSYNNAPL------------RRDLHSDDVGGAALFLLSPLARA----------VSGVTLYVDN 290 (315)
T ss_dssp HHTTCSSSSCHHHHHHHHHHHHSSS------------CCCCCHHHHHHHHHHHTSGGGTT----------CCSCEEEEST
T ss_pred hhccccccchhHHHHHHHHhccCCC------------CCCCCHHHHHHHHHHHhCchhcc----------CcCCEEEECC
Confidence 0 000111111111111111 12567899999999988754322 3458899887
Q ss_pred CC
Q 042406 341 TT 342 (424)
Q Consensus 341 ~~ 342 (424)
|.
T Consensus 291 G~ 292 (315)
T 2o2s_A 291 GL 292 (315)
T ss_dssp TG
T ss_pred Ce
Confidence 74
No 299
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=99.84 E-value=1.2e-20 Score=180.62 Aligned_cols=175 Identities=11% Similarity=-0.011 Sum_probs=125.0
Q ss_pred CCCeEEEEcCCC--hhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHh------h---hhccCCeEEEEccCCCH--H
Q 042406 78 RGLTVLVTGAAG--FVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARK------G---LLERAGVFVIDADINDK--S 144 (424)
Q Consensus 78 ~~~~vlItGg~G--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------~---~~~~~~v~~~~~Dl~d~--~ 144 (424)
++|+++||||++ +||++++++|+++|++|++.+|+....-..+...+. . ......+.++.+|+++. +
T Consensus 1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 368999999975 999999999999999999888743100000000000 0 11123478899999887 7
Q ss_pred ------------------HHHHHhhcc-----CccEEEEcccccC---ch---hhccChHHHHHHHHHHHHHHHHHHHhc
Q 042406 145 ------------------LLDKIFNVV-----AFTHVMHLAAQAG---VR---YAMQNPNSYVESNIAGFVNLLETCKSS 195 (424)
Q Consensus 145 ------------------~v~~~~~~~-----~~d~vi~~Ag~~~---~~---~~~~~~~~~~~~N~~g~~~ll~a~~~~ 195 (424)
++.++++.+ ++|+||||||+.. .. ...++.+..+++|+.|+.++.+++...
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 160 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 777777654 6899999999742 11 122334679999999999999987654
Q ss_pred CCC-CeEEEecCCcccCCCCCCCCCCCCCCCCCCC-hHHHHHHHHHHHHHHHHHH----hCCcEEEEEeccccCC
Q 042406 196 DPQ-PAIVWASSSSVYGVNKKVPFSEKDRTDQPAS-LYAATKKAGEAIAHAYNHI----YGLSITGLRFFTVYGP 264 (424)
Q Consensus 196 ~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~-~Y~~sK~~~e~~~~~~~~~----~~i~~~~vrp~~v~G~ 264 (424)
... .+||++||...+... .... .|++||++.+.+++.++.+ .|+++++|+||.|..+
T Consensus 161 m~~~g~Iv~isS~~~~~~~------------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 161 MKPQSSIISLTYHASQKVV------------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp EEEEEEEEEEECGGGTSCC------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred HhhCCeEEEEeCccccCCC------------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 211 389999997665321 2233 8999999999999988755 4899999999999765
No 300
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=99.83 E-value=1.6e-19 Score=180.66 Aligned_cols=208 Identities=18% Similarity=0.146 Sum_probs=150.3
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc----
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV---- 153 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~---- 153 (424)
++++|||||+|+||.+++++|+++|+ .|++++|+.............-.....++.++.||++|.+++.++++.+
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 48999999999999999999999998 7888888643222111111111112457899999999999999999875
Q ss_pred CccEEEEccccc-Cch----hhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc-cCCCCCCCCCCCCCCCCC
Q 042406 154 AFTHVMHLAAQA-GVR----YAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV-YGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 154 ~~d~vi~~Ag~~-~~~----~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v-yg~~~~~~~~e~~~~~~~ 227 (424)
++|+||||||+. ... ...++.+..+++|+.|+.++.+++...+.+ +||++||.+. +|. ..
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~-~iV~~SS~a~~~g~-------------~g 384 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLD-AFVLFSSGAAVWGS-------------GG 384 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCS-EEEEEEEHHHHTTC-------------TT
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCC-EEEEEeChHhcCCC-------------CC
Confidence 589999999986 221 122234578999999999999999988765 8999999554 442 34
Q ss_pred CChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccccHHHHH
Q 042406 228 ASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIV 307 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 307 (424)
...|+++|...+.+++++.. .|+++++|+||.+.+++...+. .....+.... + ..+..++.+
T Consensus 385 ~~~YaAaKa~ldala~~~~~-~Gi~v~sV~pG~w~~~gm~~~~---~~~~~l~~~g-~-------------~~l~pe~~~ 446 (496)
T 3mje_A 385 QPGYAAANAYLDALAEHRRS-LGLTASSVAWGTWGEVGMATDP---EVHDRLVRQG-V-------------LAMEPEHAL 446 (496)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-TTCCCEEEEECEESSSCC---------CHHHHHTT-E-------------EEECHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCcccCCccccCh---HHHHHHHhcC-C-------------CCCCHHHHH
Confidence 57899999999999987754 5999999999998776443211 1111122211 1 135678999
Q ss_pred HHHHHHhhhcc
Q 042406 308 KGCLAGLDTAK 318 (424)
Q Consensus 308 ~a~~~~~~~~~ 318 (424)
+++..++....
T Consensus 447 ~~l~~~l~~~~ 457 (496)
T 3mje_A 447 GALDQMLENDD 457 (496)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHcCCC
Confidence 99999888764
No 301
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=99.83 E-value=3.1e-20 Score=191.78 Aligned_cols=204 Identities=18% Similarity=0.055 Sum_probs=137.0
Q ss_pred CCCCCCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeC---------CCCchhhhHHHHHhhhhccCCeEEEEccC
Q 042406 70 KSTRPRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDN---------FNNYYETSLKKARKGLLERAGVFVIDADI 140 (424)
Q Consensus 70 ~~~~~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl 140 (424)
+.....++++|+++||||+|+||+++++.|+++|++|++++| +.+..+........ .+.. +.+|+
T Consensus 10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~-----~~~~-~~~D~ 83 (613)
T 3oml_A 10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRK-----AGGE-AVADY 83 (613)
T ss_dssp -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHH-----TTCC-EEECC
T ss_pred CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHH-----hCCe-EEEEe
Confidence 334455789999999999999999999999999999999988 33332222222221 1112 34899
Q ss_pred CCHHHHHHHhhcc-----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCC
Q 042406 141 NDKSLLDKIFNVV-----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSS 207 (424)
Q Consensus 141 ~d~~~v~~~~~~~-----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~ 207 (424)
+|.++++++++.+ ++|+||||||+.... ...++.+..+++|+.|+.++++++ ++.+.+ +||++||.
T Consensus 84 ~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g-~IV~isS~ 162 (613)
T 3oml_A 84 NSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG-RIIMTSSN 162 (613)
T ss_dssp CCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCE-EEEEECCH
T ss_pred CCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-EEEEECCH
Confidence 9999988888765 689999999986542 223345679999999999888877 444443 89999996
Q ss_pred ccc-CCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCC
Q 042406 208 SVY-GVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGK 283 (424)
Q Consensus 208 ~vy-g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~ 283 (424)
+.+ +. .....|++||++.+.+++.++.++ |+++++|+||.+- +.. .+.
T Consensus 163 a~~~~~-------------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~~--------------~~~ 214 (613)
T 3oml_A 163 SGIYGN-------------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RMT--------------EGI 214 (613)
T ss_dssp HHHHCC-------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------CCC
T ss_pred HHcCCC-------------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hhh--------------hhc
Confidence 554 32 345789999999999999998775 8999999998641 110 000
Q ss_pred ceeEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 284 RITVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 284 ~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
........+..+|+|.+++.++...
T Consensus 215 ---------~~~~~~~~~~pedvA~~v~~L~s~~ 239 (613)
T 3oml_A 215 ---------LPDILFNELKPKLIAPVVAYLCHES 239 (613)
T ss_dssp ---------CCHHHHTTCCGGGTHHHHHHTTSTT
T ss_pred ---------cchhhhhcCCHHHHHHHHHHhcCCC
Confidence 0112233557899999999888665
No 302
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=99.83 E-value=6.5e-20 Score=174.89 Aligned_cols=238 Identities=14% Similarity=0.006 Sum_probs=132.5
Q ss_pred CCCCCeEEEEcC--CChhHHHHHHHHHhCCCeEEEEeCCC-----------CchhhhHHH------HHhhhhccC-----
Q 042406 76 STRGLTVLVTGA--AGFVGSHVSLALKKRGDGVLGLDNFN-----------NYYETSLKK------ARKGLLERA----- 131 (424)
Q Consensus 76 ~~~~~~vlItGg--~G~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~~------~~~~~~~~~----- 131 (424)
.+++|++||||| +|+||+++++.|+++|++|++++|+. +........ .........
T Consensus 6 ~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (319)
T 2ptg_A 6 DLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLV 85 (319)
T ss_dssp CCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------C
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccc
Confidence 367899999999 89999999999999999999998742 111100000 000000000
Q ss_pred CeEEEEccC------------CC--------HHHHHHHhhcc-----CccEEEEcccccC---c---hhhccChHHHHHH
Q 042406 132 GVFVIDADI------------ND--------KSLLDKIFNVV-----AFTHVMHLAAQAG---V---RYAMQNPNSYVES 180 (424)
Q Consensus 132 ~v~~~~~Dl------------~d--------~~~v~~~~~~~-----~~d~vi~~Ag~~~---~---~~~~~~~~~~~~~ 180 (424)
.+.++.+|+ +| .++++++++.+ ++|+||||||... . ....++.+..+++
T Consensus 86 ~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~v 165 (319)
T 2ptg_A 86 FDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSS 165 (319)
T ss_dssp CSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHH
T ss_pred ccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhH
Confidence 134444442 22 33566665543 6799999999642 1 1122334678999
Q ss_pred HHHHHHHHHHHHHhcCC-CCeEEEecCCcccCCCCCCCCCCCCCCCCCC-ChHHHHHHHHHHHHHHHHHH----hCCcEE
Q 042406 181 NIAGFVNLLETCKSSDP-QPAIVWASSSSVYGVNKKVPFSEKDRTDQPA-SLYAATKKAGEAIAHAYNHI----YGLSIT 254 (424)
Q Consensus 181 N~~g~~~ll~a~~~~~~-~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~-~~Y~~sK~~~e~~~~~~~~~----~~i~~~ 254 (424)
|+.|+.++++++..... ..+||++||...+... ... ..|++||++.+.+++.++.+ .|++++
T Consensus 166 N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn 233 (319)
T 2ptg_A 166 SSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI------------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVN 233 (319)
T ss_dssp HTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------------THHHHHHHHHHHHHHHCCEEE
T ss_pred hhHHHHHHHHHHHHHHhcCceEEEEecccccccc------------CccchhhHHHHHHHHHHHHHHHHHhccccCeeEE
Confidence 99999999999876421 1389999997665321 222 57999999999999998765 489999
Q ss_pred EEEeccccCCCCCCCCc--HHHHHHHHHcCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCC
Q 042406 255 GLRFFTVYGPWGRPDMA--YFFFTRDIIRGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAE 332 (424)
Q Consensus 255 ~vrp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~ 332 (424)
+|+||.|..+....... ...+...... .+ .......-+...+|+|++++.++...... ..
T Consensus 234 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~---~~~~p~~r~~~peevA~~v~~L~s~~~~~----------it 295 (319)
T 2ptg_A 234 CISAGPLKSRAASAIGKAGDKTFIDLAID-----YS---EANAPLQKELESDDVGRAALFLLSPLARA----------VT 295 (319)
T ss_dssp EEEECCCC---------------------------------------CCCHHHHHHHHHHHTSGGGTT----------CC
T ss_pred EEeeCCccChhhhhcccccchhhHHHHHH-----HH---hccCCCCCCCCHHHHHHHHHHHhCcccCC----------cc
Confidence 99999998763221000 0000000000 00 00001112668999999999988754322 34
Q ss_pred cceEEcCCCCc
Q 042406 333 FRIFNLGNTTP 343 (424)
Q Consensus 333 ~~~~~i~~~~~ 343 (424)
|+++.+.+|..
T Consensus 296 G~~i~vdGG~~ 306 (319)
T 2ptg_A 296 GATLYVDNGLH 306 (319)
T ss_dssp SCEEEESTTCT
T ss_pred CCEEEECCCce
Confidence 58999988753
No 303
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=99.80 E-value=9.7e-19 Score=176.98 Aligned_cols=207 Identities=17% Similarity=0.111 Sum_probs=148.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEE-eCCCCc-------------hhhhHHHHHhhhhccCCeEEEEccCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDG-VLGL-DNFNNY-------------YETSLKKARKGLLERAGVFVIDADIN 141 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~~~~~~~~~~~~~~~~~v~~~~~Dl~ 141 (424)
.+++++|||||+|+||.++++.|+++|++ |+++ +|+... ......... ....++.++.+|++
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~---~~g~~v~~~~~Dvt 325 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA---DLGATATVVTCDLT 325 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH---HHTCEEEEEECCTT
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH---hcCCEEEEEECCCC
Confidence 46899999999999999999999999997 5555 776421 111111111 12457999999999
Q ss_pred CHHHHHHHhhcc----CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEEecCCc
Q 042406 142 DKSLLDKIFNVV----AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSD-----PQPAIVWASSSS 208 (424)
Q Consensus 142 d~~~v~~~~~~~----~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~-----~~~~~v~~SS~~ 208 (424)
|.+++.++++.+ ++|+||||||+..... ..++.+..+++|+.|+.++.+++.... .+ +||++||.+
T Consensus 326 d~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~-~iV~~SS~a 404 (525)
T 3qp9_A 326 DAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP-VLVLFSSVA 404 (525)
T ss_dssp SHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC-EEEEEEEGG
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC-EEEEECCHH
Confidence 999999999875 6899999999865422 222346789999999999999998765 44 899999966
Q ss_pred ccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEE
Q 042406 209 VYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVY 288 (424)
Q Consensus 209 vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (424)
.+-.. .....|+++|...+.+..++.. .|+++++|+||.+-++... +. .....+....
T Consensus 405 ~~~g~------------~g~~~YaaaKa~l~~lA~~~~~-~gi~v~sI~pG~~~tgm~~-~~---~~~~~~~~~g----- 462 (525)
T 3qp9_A 405 AIWGG------------AGQGAYAAGTAFLDALAGQHRA-DGPTVTSVAWSPWEGSRVT-EG---ATGERLRRLG----- 462 (525)
T ss_dssp GTTCC------------TTCHHHHHHHHHHHHHHTSCCS-SCCEEEEEEECCBTTSGGG-SS---HHHHHHHHTT-----
T ss_pred HcCCC------------CCCHHHHHHHHHHHHHHHHHHh-CCCCEEEEECCcccccccc-ch---hhHHHHHhcC-----
Confidence 54321 3468899999999998776644 4999999999999332111 11 1111111111
Q ss_pred ecCCCCccccccccHHHHHHHHHHHhhhcc
Q 042406 289 EAPDGASVARDFTYIDDIVKGCLAGLDTAK 318 (424)
Q Consensus 289 ~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~ 318 (424)
...+..+++++++..++....
T Consensus 463 ---------~~~l~pee~a~~l~~~l~~~~ 483 (525)
T 3qp9_A 463 ---------LRPLAPATALTALDTALGHGD 483 (525)
T ss_dssp ---------BCCBCHHHHHHHHHHHHHHTC
T ss_pred ---------CCCCCHHHHHHHHHHHHhCCC
Confidence 125678999999999998765
No 304
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=99.76 E-value=1.2e-17 Score=171.76 Aligned_cols=213 Identities=15% Similarity=0.101 Sum_probs=142.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccC-CCHHH-HHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI-NDKSL-LDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl-~d~~~-v~~~~~~~ 153 (424)
++++|+++||||+++||+++++.|+++|++|++.+|.. .+........ ....+..+.+|+ .+.+. ++++.+..
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~---~g~~~~~~~~Dv~~~~~~~~~~~~~~~ 393 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKA---AGGEAWPDQHDVAKDSEAIIKNVIDKY 393 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHH---TTCEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHh---cCCeEEEEEcChHHHHHHHHHHHHHhc
Confidence 57889999999999999999999999999999998732 2222222211 123566778888 55443 23333332
Q ss_pred -CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHH----hcCCCCeEEEecCCcccCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCK----SSDPQPAIVWASSSSVYGVNKKVPFSEKDRT 224 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~----~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~ 224 (424)
++|+||||||+..... ..++.+..+++|+.|+.++.+++. +.+. .+||++||.+.+-..
T Consensus 394 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~-G~IVnisS~ag~~~~----------- 461 (604)
T 2et6_A 394 GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQF-GRIINITSTSGIYGN----------- 461 (604)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTC-EEEEEECCHHHHSCC-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC-CEEEEECChhhccCC-----------
Confidence 6799999999864321 223346799999999888776653 3333 389999996553211
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEecCCCCccccccc
Q 042406 225 DQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYEAPDGASVARDFT 301 (424)
Q Consensus 225 ~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 301 (424)
.....|++||++...+.+.++.++ |+++++|.||. -.+... ..... . .....
T Consensus 462 -~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~----------~~~~~---~----------~~~~~ 516 (604)
T 2et6_A 462 -FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTL----------SIMRE---Q----------DKNLY 516 (604)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------------------CCSS
T ss_pred -CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccc----------ccCch---h----------hccCC
Confidence 334789999999999999998774 89999999983 222110 00000 0 01234
Q ss_pred cHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC
Q 042406 302 YIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT 341 (424)
Q Consensus 302 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (424)
..+|+|.+++.++..... ..|+++.+.+|
T Consensus 517 ~pe~vA~~v~~L~s~~~~-----------itG~~~~vdGG 545 (604)
T 2et6_A 517 HADQVAPLLVYLGTDDVP-----------VTGETFEIGGG 545 (604)
T ss_dssp CGGGTHHHHHHTTSTTCC-----------CCSCEEEEETT
T ss_pred CHHHHHHHHHHHhCCccC-----------CCCcEEEECCC
Confidence 679999999887765432 23377777665
No 305
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=99.76 E-value=1.8e-19 Score=172.28 Aligned_cols=176 Identities=15% Similarity=0.116 Sum_probs=128.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-------GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
.|+|+||||+||||++++..|+++|+ +|+++|+.... ........+ +....+.++ .|+.+.+.+.++++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~--~~~~g~~~d-l~~~~~~~~-~di~~~~~~~~a~~ 79 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAM--KALEGVVME-LEDCAFPLL-AGLEATDDPKVAFK 79 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGH--HHHHHHHHH-HHTTTCTTE-EEEEEESCHHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCch--hhccchhhh-hhccccccc-CCeEeccChHHHhC
Confidence 46899999999999999999999996 89999985310 000111111 111122233 57777677788888
Q ss_pred ccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcc-cCCCCCCCCCCCCC-CCCCC
Q 042406 152 VVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSV-YGVNKKVPFSEKDR-TDQPA 228 (424)
Q Consensus 152 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~v-yg~~~~~~~~e~~~-~~~~~ 228 (424)
++ |+|||+||..... ..++...+.+|+.++.++++++++.+ ...+++++|+..- .. +..++.. ...|.
T Consensus 80 ~~--D~Vih~Ag~~~~~--~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~-----~~~~~~~~~~~p~ 150 (327)
T 1y7t_A 80 DA--DYALLVGAAPRKA--GMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNA-----LIAYKNAPGLNPR 150 (327)
T ss_dssp TC--SEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCTTSCGG
T ss_pred CC--CEEEECCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhH-----HHHHHHcCCCChh
Confidence 66 9999999986533 35667899999999999999999986 5557888877431 11 1111111 12456
Q ss_pred ChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 229 SLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 229 ~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
..|+.+|+.+|++...+++.+|++.+++||++||||++.
T Consensus 151 ~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 151 NFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp GEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred heeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 789999999999999999888999999999999999763
No 306
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=99.76 E-value=1.8e-17 Score=170.54 Aligned_cols=228 Identities=17% Similarity=0.124 Sum_probs=151.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC---------CchhhhHHHHHhhhhccCCeEEEEccCCCHHHH
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN---------NYYETSLKKARKGLLERAGVFVIDADINDKSLL 146 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v 146 (424)
++++|+++||||+++||+++++.|+++|++|++.+|+. +..+....+... .+.. ..+|++|.+++
T Consensus 5 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~-----~g~~-~~~d~~d~~~~ 78 (604)
T 2et6_A 5 DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVK-----NGGV-AVADYNNVLDG 78 (604)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHH-----TTCE-EEEECCCTTCH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHh-----cCCe-EEEEcCCHHHH
Confidence 46789999999999999999999999999999998864 222222222211 1112 23577776555
Q ss_pred HHHhhcc-----CccEEEEcccccCch----hhccChHHHHHHHHHHHHHHHHHH----HhcCCCCeEEEecCCccc-CC
Q 042406 147 DKIFNVV-----AFTHVMHLAAQAGVR----YAMQNPNSYVESNIAGFVNLLETC----KSSDPQPAIVWASSSSVY-GV 212 (424)
Q Consensus 147 ~~~~~~~-----~~d~vi~~Ag~~~~~----~~~~~~~~~~~~N~~g~~~ll~a~----~~~~~~~~~v~~SS~~vy-g~ 212 (424)
+++++.+ ++|+||||||+.... ...++.+..+++|+.|+.++.+++ ++.+.+ +||++||.+.+ +.
T Consensus 79 ~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G-~IVnisS~ag~~~~ 157 (604)
T 2et6_A 79 DKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYG-RIVNTSSPAGLYGN 157 (604)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE-EEEEECCHHHHHCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCC-EEEEECCHHHcCCC
Confidence 4444332 689999999985432 123344679999999988776665 344433 89999996543 32
Q ss_pred CCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCceeEEe
Q 042406 213 NKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRITVYE 289 (424)
Q Consensus 213 ~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (424)
.....|++||++.+.+.+.++.++ ||++++|.|+ +..+ +.... .+
T Consensus 158 -------------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~----------m~~~~---~~----- 205 (604)
T 2et6_A 158 -------------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSR----------MTESI---MP----- 205 (604)
T ss_dssp -------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCH----------HHHTT---SC-----
T ss_pred -------------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCc----------ccccc---CC-----
Confidence 234789999999999999998774 8999999996 2211 11100 00
Q ss_pred cCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCC------------------CcccHHHHHH
Q 042406 290 APDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNT------------------TPVPVSRLVS 351 (424)
Q Consensus 290 ~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------------------~~~s~~el~~ 351 (424)
.........+|+|.+++.++..... ..|+++.+.+| ..++..++.+
T Consensus 206 -----~~~~~~~~pe~vA~~v~~L~s~~~~-----------itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 269 (604)
T 2et6_A 206 -----PPMLEKLGPEKVAPLVLYLSSAENE-----------LTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAK 269 (604)
T ss_dssp -----HHHHTTCSHHHHHHHHHHHTSSSCC-----------CCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHH
T ss_pred -----hhhhccCCHHHHHHHHHHHhCCccc-----------CCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHH
Confidence 0111235789999999988876521 22356665443 3467788888
Q ss_pred HHHHHhC
Q 042406 352 LLEKILK 358 (424)
Q Consensus 352 ~i~~~~g 358 (424)
.+.+...
T Consensus 270 ~~~~~~~ 276 (604)
T 2et6_A 270 RFSEILD 276 (604)
T ss_dssp HHHHHTC
T ss_pred HHHHhhc
Confidence 8877653
No 307
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.75 E-value=4.3e-17 Score=181.01 Aligned_cols=211 Identities=14% Similarity=0.113 Sum_probs=146.0
Q ss_pred CCCCCeEEEEcCCCh-hHHHHHHHHHhCCCeEEEEe-CCCCchhhhHHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhc
Q 042406 76 STRGLTVLVTGAAGF-VGSHVSLALKKRGDGVLGLD-NFNNYYETSLKKARKGLL-ERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
++++|++|||||+|+ ||+++++.|+++|++|++++ |+.+.............. ...++.++.+|++|.++++++++.
T Consensus 672 ~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~ 751 (1887)
T 2uv8_A 672 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 751 (1887)
T ss_dssp CCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHH
Confidence 478899999999998 99999999999999999994 554433332222222111 134689999999999999888763
Q ss_pred c-----------CccEEEEcccccCch-h-h-----ccChHHHHHHHHHHHHHHHHHHHhcCC-----CCeEEEecCCcc
Q 042406 153 V-----------AFTHVMHLAAQAGVR-Y-A-----MQNPNSYVESNIAGFVNLLETCKSSDP-----QPAIVWASSSSV 209 (424)
Q Consensus 153 ~-----------~~d~vi~~Ag~~~~~-~-~-----~~~~~~~~~~N~~g~~~ll~a~~~~~~-----~~~~v~~SS~~v 209 (424)
+ ++|+||||||+.... . . .++.+..+++|+.|+.+++++++.... ..+||++||...
T Consensus 752 i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag 831 (1887)
T 2uv8_A 752 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 831 (1887)
T ss_dssp HHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHh
Confidence 1 479999999986432 1 1 223467999999999999988743211 138999999755
Q ss_pred cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHHHHHhC--CcEEEEEeccccC-CCCCCCCcHHHHHHHHHcCCce
Q 042406 210 YGVNKKVPFSEKDRTDQPASLYAATKKAGEAI-AHAYNHIYG--LSITGLRFFTVYG-PWGRPDMAYFFFTRDIIRGKRI 285 (424)
Q Consensus 210 yg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~~--i~~~~vrp~~v~G-~~~~~~~~~~~~~~~~~~~~~~ 285 (424)
+.. ....|++||++.+.+ .+.++.+++ |++++|+||.|.| +-....... .......++
T Consensus 832 ~~g--------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~----~~~~~~~pl 893 (1887)
T 2uv8_A 832 TFG--------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNII----AEGIEKMGV 893 (1887)
T ss_dssp CSS--------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTT----HHHHHTTSC
T ss_pred ccC--------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhH----HHHHHhcCC
Confidence 421 236799999999998 677766543 9999999999984 321111111 111111111
Q ss_pred eEEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 286 TVYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 286 ~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
-+...+|+|.+++.++...
T Consensus 894 -------------r~~sPEEVA~avlfLaSd~ 912 (1887)
T 2uv8_A 894 -------------RTFSQKEMAFNLLGLLTPE 912 (1887)
T ss_dssp -------------CCEEHHHHHHHHHGGGSHH
T ss_pred -------------CCCCHHHHHHHHHHHhCCC
Confidence 1347899999999888665
No 308
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=99.74 E-value=4.4e-17 Score=156.35 Aligned_cols=177 Identities=13% Similarity=-0.037 Sum_probs=127.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEeCCCCchhhh-----------HHHHHhhhhccCCeEEEEccCCCH
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKK-RGDGVLGLDNFNNYYETS-----------LKKARKGLLERAGVFVIDADINDK 143 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~Dl~d~ 143 (424)
...+|++|||||+++||+++++.|++ +|++|++++|+.+..... ...... .....+..+.+|++|.
T Consensus 44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~--~~G~~a~~i~~Dvtd~ 121 (405)
T 3zu3_A 44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA--QKGLYAKSINGDAFSD 121 (405)
T ss_dssp TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH--HTTCCEEEEESCTTSH
T ss_pred CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH--hcCCceEEEECCCCCH
Confidence 35689999999999999999999999 999999999876543321 111111 1235688999999999
Q ss_pred HHHHHHhhcc-----CccEEEEcccccC-------------c-h------------------------hhccChHHHHHH
Q 042406 144 SLLDKIFNVV-----AFTHVMHLAAQAG-------------V-R------------------------YAMQNPNSYVES 180 (424)
Q Consensus 144 ~~v~~~~~~~-----~~d~vi~~Ag~~~-------------~-~------------------------~~~~~~~~~~~~ 180 (424)
++++++++.+ ++|+||||||... . + ...++.+..+++
T Consensus 122 ~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~V 201 (405)
T 3zu3_A 122 EIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAV 201 (405)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHh
Confidence 9998888765 6899999999741 0 0 112233567888
Q ss_pred HHHHHH-HHHHHHHhcCC---CCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh----CCc
Q 042406 181 NIAGFV-NLLETCKSSDP---QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY----GLS 252 (424)
Q Consensus 181 N~~g~~-~ll~a~~~~~~---~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~----~i~ 252 (424)
|..+.. .+++++..... ..++|++||.+..-.. +......|++||.+.+.+++.++.++ |++
T Consensus 202 n~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~----------p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIR 271 (405)
T 3zu3_A 202 MGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH----------DIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGD 271 (405)
T ss_dssp HSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT----------TTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCE
T ss_pred hchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC----------CCccchHHHHHHHHHHHHHHHHHHHhCcccCeE
Confidence 887765 55555432211 1389999996553210 10122789999999999999998773 899
Q ss_pred EEEEEeccccCC
Q 042406 253 ITGLRFFTVYGP 264 (424)
Q Consensus 253 ~~~vrp~~v~G~ 264 (424)
+++|.||.|-.+
T Consensus 272 VNaVaPG~i~T~ 283 (405)
T 3zu3_A 272 ARVSVLKAVVSQ 283 (405)
T ss_dssp EEEEECCCCCCH
T ss_pred EEEEEeCCCcCc
Confidence 999999999876
No 309
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.73 E-value=1.3e-16 Score=176.86 Aligned_cols=211 Identities=16% Similarity=0.107 Sum_probs=144.3
Q ss_pred CCCCCeEEEEcCCCh-hHHHHHHHHHhCCCeEEEEe-CCCCchhhhHHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhc
Q 042406 76 STRGLTVLVTGAAGF-VGSHVSLALKKRGDGVLGLD-NFNNYYETSLKKARKGLL-ERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
++++|++|||||+|+ ||.++++.|+++|++|++++ |+.+...........+.. ....+.++.+|++|.++++++++.
T Consensus 649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 468899999999999 99999999999999999996 444333222222211111 134688999999999999988864
Q ss_pred c---------CccEEEEcccccCch-h-h-----ccChHHHHHHHHHHHHHHHHHHH--hcC---CCCeEEEecCCcccC
Q 042406 153 V---------AFTHVMHLAAQAGVR-Y-A-----MQNPNSYVESNIAGFVNLLETCK--SSD---PQPAIVWASSSSVYG 211 (424)
Q Consensus 153 ~---------~~d~vi~~Ag~~~~~-~-~-----~~~~~~~~~~N~~g~~~ll~a~~--~~~---~~~~~v~~SS~~vyg 211 (424)
+ ++|+||||||+.... . . .++.+..+++|+.|+.+++++++ ... ...+||++||...+.
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 2 479999999986432 1 1 12346799999999998887632 221 113899999965532
Q ss_pred CCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH-h--CCcEEEEEecccc-CCCCCCCCcHHHHHHHHHcCCceeE
Q 042406 212 VNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI-Y--GLSITGLRFFTVY-GPWGRPDMAYFFFTRDIIRGKRITV 287 (424)
Q Consensus 212 ~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~-~--~i~~~~vrp~~v~-G~~~~~~~~~~~~~~~~~~~~~~~~ 287 (424)
. ....|++||++.+.+++.+..+ + ++++++|+||.+- ++.... ...........++
T Consensus 809 g--------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~----~~~~~~~~~~~pl-- 868 (1878)
T 2uv9_A 809 G--------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA----NNLVAEGVEKLGV-- 868 (1878)
T ss_dssp S--------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH----HHHTHHHHHTTTC--
T ss_pred C--------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc----chhhHHHHHhcCC--
Confidence 1 2367999999999998776543 2 3999999999987 442211 0111122221111
Q ss_pred EecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 288 YEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 288 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
-+...+|+|.+++.++...
T Consensus 869 -----------r~~sPeEVA~avlfLaSd~ 887 (1878)
T 2uv9_A 869 -----------RTFSQQEMAFNLLGLMAPA 887 (1878)
T ss_dssp -----------CCBCHHHHHHHHHHHHSHH
T ss_pred -----------CCCCHHHHHHHHHHHhCCc
Confidence 1347899999999887654
No 310
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=99.73 E-value=3.7e-17 Score=158.34 Aligned_cols=177 Identities=12% Similarity=-0.044 Sum_probs=125.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEeCCCCchhhh-----------HHHHHhhhhccCCeEEEEccCCCHHH
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKK-RGDGVLGLDNFNNYYETS-----------LKKARKGLLERAGVFVIDADINDKSL 145 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~-----------~~~~~~~~~~~~~v~~~~~Dl~d~~~ 145 (424)
.+|++|||||+++||+++++.|++ +|++|++++|+.+..... ..... . .....+..+.+|++|.++
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~-~-~~G~~a~~i~~Dvtd~~~ 137 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHA-K-AAGLYSKSINGDAFSDAA 137 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHH-H-HTTCCEEEEESCTTSHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHH-H-hcCCcEEEEEecCCCHHH
Confidence 488999999999999999999999 999999999987654321 11111 1 123568899999999999
Q ss_pred HHHHhhcc------CccEEEEccccc-------------Cc-h------------------------hhccChHHHHHHH
Q 042406 146 LDKIFNVV------AFTHVMHLAAQA-------------GV-R------------------------YAMQNPNSYVESN 181 (424)
Q Consensus 146 v~~~~~~~------~~d~vi~~Ag~~-------------~~-~------------------------~~~~~~~~~~~~N 181 (424)
++++++.+ ++|+||||||.. .. + ...++.+..+++|
T Consensus 138 v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn 217 (422)
T 3s8m_A 138 RAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVM 217 (422)
T ss_dssp HHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhh
Confidence 88777543 579999999862 10 0 1122234567777
Q ss_pred HHHHH-HHHHHHHhcCC---CCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCcEE
Q 042406 182 IAGFV-NLLETCKSSDP---QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY---GLSIT 254 (424)
Q Consensus 182 ~~g~~-~ll~a~~~~~~---~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~i~~~ 254 (424)
..+.. .+++++..... ..++|++||.+..-.. +......|++||.+.+.+.+.++.++ |++++
T Consensus 218 ~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~----------p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVN 287 (422)
T 3s8m_A 218 GGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW----------PIYWHGALGKAKVDLDRTAQRLNARLAKHGGGAN 287 (422)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH----------HHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred chhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC----------CCccchHHHHHHHHHHHHHHHHHHHhCccCEEEE
Confidence 66654 55665543221 1389999996553210 00112689999999999999999775 89999
Q ss_pred EEEeccccCCCC
Q 042406 255 GLRFFTVYGPWG 266 (424)
Q Consensus 255 ~vrp~~v~G~~~ 266 (424)
+|.||.|-.+..
T Consensus 288 aVaPG~i~T~~~ 299 (422)
T 3s8m_A 288 VAVLKSVVTQAS 299 (422)
T ss_dssp EEEECCCCCTTG
T ss_pred EEEcCCCcChhh
Confidence 999999988744
No 311
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=99.69 E-value=9e-17 Score=170.12 Aligned_cols=171 Identities=24% Similarity=0.234 Sum_probs=130.8
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHH-hCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc-
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALK-KRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV- 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~- 153 (424)
..+++++||||+|+||+.+++.|+ ++|+ .|++++|+....+........-.....++.++.||++|.++++++++.+
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~ 607 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIP 607 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSC
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 468999999999999999999999 7998 5999999743222211111111112457899999999999999999876
Q ss_pred ---CccEEEEcccccCchh----hccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCccc-CCCCCCCCCCCCCCC
Q 042406 154 ---AFTHVMHLAAQAGVRY----AMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVY-GVNKKVPFSEKDRTD 225 (424)
Q Consensus 154 ---~~d~vi~~Ag~~~~~~----~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vy-g~~~~~~~~e~~~~~ 225 (424)
++|+||||||+..... ..++.+..+++|+.|+.++.+++.... +||++||.+.+ |.
T Consensus 608 ~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l---~iV~~SS~ag~~g~------------- 671 (795)
T 3slk_A 608 DEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDV---ALVLFSSVSGVLGS------------- 671 (795)
T ss_dssp TTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS---EEEEEEETHHHHTC-------------
T ss_pred HhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC---EEEEEccHHhcCCC-------------
Confidence 5899999999865322 223346789999999999999884432 79999996554 32
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCC
Q 042406 226 QPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGP 264 (424)
Q Consensus 226 ~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~ 264 (424)
.....|+++|...+.+.+++... |+++++|.||.+-++
T Consensus 672 ~g~~~YaAaka~~~alA~~~~~~-Gi~v~sI~pG~v~t~ 709 (795)
T 3slk_A 672 GGQGNYAAANSFLDALAQQRQSR-GLPTRSLAWGPWAEH 709 (795)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHT-TCCEEEEEECCCSCC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHc-CCeEEEEECCeECcc
Confidence 44688999999888888877654 999999999988755
No 312
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=99.69 E-value=4.7e-16 Score=151.82 Aligned_cols=176 Identities=13% Similarity=-0.025 Sum_probs=124.3
Q ss_pred CCCCeEEEEcCCChhHHH--HHHHHHhCCCeEEEEeCCCCchh-----------hhHHHHHhhhhccCCeEEEEccCCCH
Q 042406 77 TRGLTVLVTGAAGFVGSH--VSLALKKRGDGVLGLDNFNNYYE-----------TSLKKARKGLLERAGVFVIDADINDK 143 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~--l~~~L~~~g~~V~~~~r~~~~~~-----------~~~~~~~~~~~~~~~v~~~~~Dl~d~ 143 (424)
..+|++|||||+++||.+ +++.|+++|++|++++|+..... ........ .....+.++.+|++|.
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~Dvtd~ 135 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK--KKGLVAKNFIEDAFSN 135 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH--HTTCCEEEEESCTTCH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH--HcCCcEEEEEeeCCCH
Confidence 578999999999999999 99999999999999999765432 11111111 1235688999999999
Q ss_pred HHHHHHhhcc-----CccEEEEccccc-------------Cc-h------------------------hhccChHHHHHH
Q 042406 144 SLLDKIFNVV-----AFTHVMHLAAQA-------------GV-R------------------------YAMQNPNSYVES 180 (424)
Q Consensus 144 ~~v~~~~~~~-----~~d~vi~~Ag~~-------------~~-~------------------------~~~~~~~~~~~~ 180 (424)
++++++++.+ ++|+||||||.. .. + ...++.+..+++
T Consensus 136 ~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~v 215 (418)
T 4eue_A 136 ETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKV 215 (418)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHH
Confidence 9998888765 689999999973 00 0 011222456666
Q ss_pred HHHHHH-HHHHHHHhcCC---CCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH----hCCc
Q 042406 181 NIAGFV-NLLETCKSSDP---QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI----YGLS 252 (424)
Q Consensus 181 N~~g~~-~ll~a~~~~~~---~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~----~~i~ 252 (424)
|..+.. .+++++..... ..++|++||.+..-.. +......|++||.+.+.+++.++.+ .|++
T Consensus 216 n~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~----------p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIr 285 (418)
T 4eue_A 216 MGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY----------KIYREGTIGIAKKDLEDKAKLINEKLNRVIGGR 285 (418)
T ss_dssp HSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT----------TTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCE
T ss_pred hhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC----------CccccHHHHHHHHHHHHHHHHHHHHhCCccCeE
Confidence 666554 45555443221 1379999986543210 1122378999999999999998865 5899
Q ss_pred EEEEEeccccCC
Q 042406 253 ITGLRFFTVYGP 264 (424)
Q Consensus 253 ~~~vrp~~v~G~ 264 (424)
+++|.||.|-.+
T Consensus 286 VN~V~PG~v~T~ 297 (418)
T 4eue_A 286 AFVSVNKALVTK 297 (418)
T ss_dssp EEEEECCCCCCH
T ss_pred EEEEECCcCcCh
Confidence 999999999875
No 313
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.67 E-value=7.5e-17 Score=173.61 Aligned_cols=212 Identities=14% Similarity=0.093 Sum_probs=142.8
Q ss_pred CCCCCeEEEEcCCCh-hHHHHHHHHHhCCCeEEEE-eCCCCchhhhHHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhc
Q 042406 76 STRGLTVLVTGAAGF-VGSHVSLALKKRGDGVLGL-DNFNNYYETSLKKARKGLL-ERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
++++|++|||||+|+ ||+++++.|+++|++|+++ +|+.+.............. ...++.++.+|++|.++++++++.
T Consensus 473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~ 552 (1688)
T 2pff_A 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEF 552 (1688)
T ss_dssp CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHH
T ss_pred ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHH
Confidence 467899999999998 9999999999999999998 4655444333322221111 134688999999999999888763
Q ss_pred c-----------CccEEEEcccccCch-hh------ccChHHHHHHHHHHHHHHHHHHHh--cCC---CCeEEEecCCcc
Q 042406 153 V-----------AFTHVMHLAAQAGVR-YA------MQNPNSYVESNIAGFVNLLETCKS--SDP---QPAIVWASSSSV 209 (424)
Q Consensus 153 ~-----------~~d~vi~~Ag~~~~~-~~------~~~~~~~~~~N~~g~~~ll~a~~~--~~~---~~~~v~~SS~~v 209 (424)
+ ++|+||||||+.... .. .++.+..+++|+.|+.+++++++. ... ..+||++||.+.
T Consensus 553 I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG 632 (1688)
T 2pff_A 553 IYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHG 632 (1688)
T ss_dssp HHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTT
T ss_pred HHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHh
Confidence 2 479999999985432 11 223367899999999999888732 211 138999999655
Q ss_pred cCCCCCCCCCCCCCCCCCCChHHHHHHHHHHH-HHHHHHHh--CCcEEEEEeccccCCCCCCCCcHHHHHHHHHcCCcee
Q 042406 210 YGVNKKVPFSEKDRTDQPASLYAATKKAGEAI-AHAYNHIY--GLSITGLRFFTVYGPWGRPDMAYFFFTRDIIRGKRIT 286 (424)
Q Consensus 210 yg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~-~~~~~~~~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 286 (424)
+.. ....|++||++.+.+ .+.++.++ .+++++|+||.|.|.+..... ......... .
T Consensus 633 ~~G--------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~---e~~~~~l~~--i- 692 (1688)
T 2pff_A 633 TFG--------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN---NIIAEGIEK--M- 692 (1688)
T ss_dssp TSS--------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT---TTCSTTTSS--S-
T ss_pred ccC--------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc---hHHHHHHHh--C-
Confidence 321 236799999999998 44444443 389999999999853211100 000000000 0
Q ss_pred EEecCCCCccccccccHHHHHHHHHHHhhhc
Q 042406 287 VYEAPDGASVARDFTYIDDIVKGCLAGLDTA 317 (424)
Q Consensus 287 ~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 317 (424)
+ .-+...+|+|.+++.++...
T Consensus 693 -------p---lR~~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 693 -------G---VRTFSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp -------S---CCCCCCCTTHHHHHHHTSTT
T ss_pred -------C---CCCCCHHHHHHHHHHHhCCC
Confidence 0 01346789999999888655
No 314
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.50 E-value=1.1e-13 Score=161.52 Aligned_cols=173 Identities=16% Similarity=0.084 Sum_probs=124.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc---
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDG-VLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV--- 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~--- 153 (424)
.+|+++||||+|+||+.+++.|+++|++ |++++|+.............-.....++.++.+|++|.++++++++.+
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 6899999999999999999999999997 788888765433221111111112356889999999999999888754
Q ss_pred -CccEEEEcccccCc----hhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcccCCCCCCCCCCCCCCCCC
Q 042406 154 -AFTHVMHLAAQAGV----RYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSVYGVNKKVPFSEKDRTDQP 227 (424)
Q Consensus 154 -~~d~vi~~Ag~~~~----~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~ 227 (424)
++|+||||||+... ....++.+..+++|+.|+.++.+++.... ...+||++||.+..-.. ..
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~------------~g 2030 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN------------AG 2030 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC------------TT
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC------------CC
Confidence 68999999997542 12334456789999999999988776532 11389999996554211 34
Q ss_pred CChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccC
Q 042406 228 ASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYG 263 (424)
Q Consensus 228 ~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G 263 (424)
...|+++|.+.+.+++....+ |++...+..|.+-+
T Consensus 2031 ~~~Y~aaKaal~~l~~~rr~~-Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2031 QANYGFANSAMERICEKRRHD-GLPGLAVQWGAIGD 2065 (2512)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT-TSCCCEEEECCBCT
T ss_pred cHHHHHHHHHHHHHHHHHHHC-CCcEEEEEccCcCC
Confidence 578999999999999977655 89999998887643
No 315
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.44 E-value=6.3e-13 Score=154.97 Aligned_cols=244 Identities=14% Similarity=0.069 Sum_probs=150.6
Q ss_pred CCCCCeEEEEcCCCh-hHHHHHHHHHhCCCeEEEEeCCCCchhhh-HHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhc
Q 042406 76 STRGLTVLVTGAAGF-VGSHVSLALKKRGDGVLGLDNFNNYYETS-LKKARKGLL-ERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
.+++|++|||||+++ ||+++++.|+++|++|++.+|+.+..... ......+.. ....+..+.+|++|.++++++++.
T Consensus 2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 478999999999999 99999999999999999999987641111 111111111 234578899999999999888653
Q ss_pred c---------CccEEEEccccc----Cc-----hhhccCh----HHHHHHHHHHHHHHHHHHHh----cCCCC--eEEEe
Q 042406 153 V---------AFTHVMHLAAQA----GV-----RYAMQNP----NSYVESNIAGFVNLLETCKS----SDPQP--AIVWA 204 (424)
Q Consensus 153 ~---------~~d~vi~~Ag~~----~~-----~~~~~~~----~~~~~~N~~g~~~ll~a~~~----~~~~~--~~v~~ 204 (424)
+ ++|+||||||+. .. .....+. +..+++|+.++..+++++.. .+... .+|..
T Consensus 2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D 2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence 2 579999999971 11 0112222 34588999998877766543 33211 22222
Q ss_pred cCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH--h--CCcEEEEEeccccCCCCCCCCcHHHHHHHHH
Q 042406 205 SSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHI--Y--GLSITGLRFFTVYGPWGRPDMAYFFFTRDII 280 (424)
Q Consensus 205 SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~--~--~i~~~~vrp~~v~G~~~~~~~~~~~~~~~~~ 280 (424)
+| ...+.. .....|++||++.+.+++.++.+ + +++++.+.||.|-+....... .......
T Consensus 2293 ~s-s~~g~~------------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~---~~~~~~~ 2356 (3089)
T 3zen_D 2293 GS-PNRGMF------------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQN---DAIVSAV 2356 (3089)
T ss_dssp EC-SSTTSC------------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTT---TTTHHHH
T ss_pred CC-cccccC------------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccc---hhHHHHH
Confidence 22 111110 12357999999999999999988 4 689999999998753221110 0011111
Q ss_pred cCCceeEEecCCCCccccccccHHHHHHHHHHHhhhccccCCCCCCCCCCCCcceEEcCCCC---cccHHHHHHHHHH
Q 042406 281 RGKRITVYEAPDGASVARDFTYIDDIVKGCLAGLDTAKKSTGSGGKKKGPAEFRIFNLGNTT---PVPVSRLVSLLEK 355 (424)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~s~~el~~~i~~ 355 (424)
..... .....+|+|.+++.++......-. + ...-...+.+|- ...+.++.+.+.+
T Consensus 2357 ~~~~~-------------r~~~PeEIA~avlfLaS~~a~~~~-~------~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D 2357 EEAGV-------------TTYTTDEMAAMLLDLCTVETKVAA-A------GAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp GGGSC-------------BCEEHHHHHHHHHHTTSHHHHHHH-H------HSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred HhcCC-------------CCCCHHHHHHHHHHHhChhhhhHh-c------CCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence 11110 122689999999988765432100 0 000233444543 3678888876643
No 316
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=99.15 E-value=1.9e-10 Score=91.93 Aligned_cols=91 Identities=22% Similarity=0.195 Sum_probs=72.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
.+|+|+|+|+ |++|+.+++.|++.| ++|++++|+.+.... ....++.++.+|+.+.+.+.+++++. |
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~---------~~~~~~~~~~~d~~~~~~~~~~~~~~--d 71 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAV---------LNRMGVATKQVDAKDEAGLAKALGGF--D 71 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHH---------HHTTTCEEEECCTTCHHHHHHHTTTC--S
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHH---------HHhCCCcEEEecCCCHHHHHHHHcCC--C
Confidence 4578999999 999999999999999 899999995432111 11357888999999999999999865 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCC
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQ 198 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~ 198 (424)
+|||+++.. .+.++++++.+.+..
T Consensus 72 ~vi~~~~~~------------------~~~~~~~~~~~~g~~ 95 (118)
T 3ic5_A 72 AVISAAPFF------------------LTPIIAKAAKAAGAH 95 (118)
T ss_dssp EEEECSCGG------------------GHHHHHHHHHHTTCE
T ss_pred EEEECCCch------------------hhHHHHHHHHHhCCC
Confidence 999998631 135788889888863
No 317
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=99.14 E-value=5.7e-11 Score=113.09 Aligned_cols=173 Identities=11% Similarity=0.057 Sum_probs=116.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEeCC----CCchhhhHHHHHhhhhccCCeEEEEccCCCHHHH
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-------GVLGLDNF----NNYYETSLKKARKGLLERAGVFVIDADINDKSLL 146 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v 146 (424)
+.|+|+||||+|+||.+++..|+.+|. +|+++|++ .++......... .....+ ..|+......
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~-----~~~~~~-~~~i~~~~~~ 77 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEID-----DCAFPL-LAGMTAHADP 77 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHH-----TTTCTT-EEEEEEESSH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHh-----hhcccc-cCcEEEecCc
Confidence 347899999999999999999999885 79999885 211111111111 110011 1355555567
Q ss_pred HHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCCcc---cCCCCCCCCCCCC
Q 042406 147 DKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSSSV---YGVNKKVPFSEKD 222 (424)
Q Consensus 147 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~~v---yg~~~~~~~~e~~ 222 (424)
.++++++ |+|||+||.... ...+....+..|+.++.++++++.+.+ ...+||++|...- |-.. +..
T Consensus 78 ~~al~~a--D~Vi~~ag~~~~--~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~------~~~ 147 (329)
T 1b8p_A 78 MTAFKDA--DVALLVGARPRG--PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAM------KSA 147 (329)
T ss_dssp HHHTTTC--SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH------HTC
T ss_pred HHHhCCC--CEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHH------HHc
Confidence 7888887 999999997432 223456789999999999999999985 6668999987220 0000 000
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWG 266 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~ 266 (424)
+-.++...|+.+++...++...+++..|++...|+..+|+|..+
T Consensus 148 ~~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~Hg 191 (329)
T 1b8p_A 148 PSLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNHS 191 (329)
T ss_dssp TTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCSS
T ss_pred CCCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEeccC
Confidence 00022235777888888888888888898877888777888544
No 318
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=99.13 E-value=1.1e-09 Score=104.27 Aligned_cols=179 Identities=14% Similarity=0.024 Sum_probs=112.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHH-hCCCeEEEEeCCCCchhhh---------HHHHHhhhhccCCeEEEEccCCCHHH
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALK-KRGDGVLGLDNFNNYYETS---------LKKARKGLLERAGVFVIDADINDKSL 145 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~~~~~v~~~~~Dl~d~~~ 145 (424)
...+|++|||||+++||.+.+..|+ +.|+.|+++.+..+..+.. ..-...-.........+.||++|.+.
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~ 126 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI 126 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence 4567999999999999999999998 6799999999876543221 00011111234678899999999999
Q ss_pred HHHHhhcc-----CccEEEEcccccCchhh------------------------cc-----------ChHHH-HHHHHHH
Q 042406 146 LDKIFNVV-----AFTHVMHLAAQAGVRYA------------------------MQ-----------NPNSY-VESNIAG 184 (424)
Q Consensus 146 v~~~~~~~-----~~d~vi~~Ag~~~~~~~------------------------~~-----------~~~~~-~~~N~~g 184 (424)
++++++.+ ++|+|||++|...-... .. ..++. .-+.++|
T Consensus 127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg 206 (401)
T 4ggo_A 127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG 206 (401)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence 99988876 78999999997421000 00 00111 1112222
Q ss_pred H---HHHHHHHHhcCC---CCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh-CCcEEEEE
Q 042406 185 F---VNLLETCKSSDP---QPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAATKKAGEAIAHAYNHIY-GLSITGLR 257 (424)
Q Consensus 185 ~---~~ll~a~~~~~~---~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-~i~~~~vr 257 (424)
. ...+.+....+. +.++|-+|+.+.- . ..+......+|.+|.+.|..++.++.+. ++++.++.
T Consensus 207 ~s~~s~w~~al~~a~lla~G~siva~SYiGse---~-------t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~~~a~v~v 276 (401)
T 4ggo_A 207 GEDWERWIKQLSKEGLLEEGCITLAYSYIGPE---A-------TQALYRKGTIGKAKEHLEATAHRLNKENPSIRAFVSV 276 (401)
T ss_dssp SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCG---G-------GHHHHTTSHHHHHHHHHHHHHHHHHHHCTTEEEEEEE
T ss_pred hhHHHHHHHHHHhhhcccCCceEEEEeccCcc---e-------eecCCCccHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 112222222221 2267777763221 0 0010123578999999999999999876 67888888
Q ss_pred eccccCC
Q 042406 258 FFTVYGP 264 (424)
Q Consensus 258 p~~v~G~ 264 (424)
++.+..+
T Consensus 277 ~~a~vT~ 283 (401)
T 4ggo_A 277 NKGLVTR 283 (401)
T ss_dssp CCCCCCT
T ss_pred cCccccc
Confidence 8777654
No 319
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=98.98 E-value=8.9e-10 Score=102.87 Aligned_cols=84 Identities=20% Similarity=0.175 Sum_probs=67.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+++|+++||||+|++|++++..|+++|++|++++|+.++.+........ ..++.++.+|++|.+++.++++++
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~-- 189 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNK----RFKVNVTAAETADDASRAEAVKGA-- 189 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH----HHTCCCEEEECCSHHHHHHHTTTC--
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHh----cCCcEEEEecCCCHHHHHHHHHhC--
Confidence 35789999999999999999999999999999999975443332222211 124678889999999999999876
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||||||..
T Consensus 190 DvlVn~ag~g 199 (287)
T 1lu9_A 190 HFVFTAGAIG 199 (287)
T ss_dssp SEEEECCCTT
T ss_pred CEEEECCCcc
Confidence 9999999863
No 320
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=98.91 E-value=8.7e-09 Score=97.72 Aligned_cols=117 Identities=19% Similarity=0.180 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
..|+|+||||+|++|..++..|+.+| ++|+++|++.+ ........ .. . ....+ .. +.+..++++++++.
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~-~~-~-~~~~v-~~-~~~t~d~~~al~ga-- 77 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADIS-HM-D-TGAVV-RG-FLGQQQLEAALTGM-- 77 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHH-TS-C-SSCEE-EE-EESHHHHHHHHTTC--
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhh-cc-c-ccceE-EE-EeCCCCHHHHcCCC--
Confidence 44789999999999999999999999 79999998653 11111111 10 1 11111 11 33456677888877
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+|||+||..... .......+..|+.++.++++++.+.++. .+|+++|
T Consensus 78 DvVi~~ag~~~~~--g~~r~dl~~~N~~~~~~i~~~i~~~~p~-~~viv~S 125 (326)
T 1smk_A 78 DLIIVPAGVPRKP--GMTRDDLFKINAGIVKTLCEGIAKCCPR-AIVNLIS 125 (326)
T ss_dssp SEEEECCCCCCCS--SCCCSHHHHHHHHHHHHHHHHHHHHCTT-SEEEECC
T ss_pred CEEEEcCCcCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEEEC
Confidence 9999999964321 2234578999999999999999998876 5666666
No 321
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=98.85 E-value=1.4e-08 Score=95.73 Aligned_cols=172 Identities=13% Similarity=0.100 Sum_probs=103.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeC--CCCchhhhHHHHHhh-hhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDN--FNNYYETSLKKARKG-LLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
|+|+||||+|++|.+++..|+.+|. ++.++|+ +.+............ ......+.+...| +++.++++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~al~ga- 75 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRIIDES- 75 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGGGTTC-
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHHhCCC-
Confidence 5899999999999999999999885 6888887 332121111111111 1111233333221 2245667777
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCCCCCCCCCCCCCCCCCCChHHH-
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGVNKKVPFSEKDRTDQPASLYAA- 233 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~~~Y~~- 233 (424)
|+|||+||..... .......+..|+.++.++++++++.+ . .+|+++|--+.-... .-... ...++...+|.
T Consensus 76 -D~Vi~~Ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~-~-~~vlv~SNPv~~~t~-~~~k~--~~~p~~rviG~g 147 (313)
T 1hye_A 76 -DVVIITSGVPRKE--GMSRMDLAKTNAKIVGKYAKKIAEIC-D-TKIFVITNPVDVMTY-KALVD--SKFERNQVFGLG 147 (313)
T ss_dssp -SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHC-C-CEEEECSSSHHHHHH-HHHHH--HCCCTTSEEECT
T ss_pred -CEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEEecCcHHHHHH-HHHHh--hCcChhcEEEeC
Confidence 9999999974321 23456789999999999999999998 6 566666521100000 00000 00133455665
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEEeccccCCC
Q 042406 234 TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPW 265 (424)
Q Consensus 234 sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~ 265 (424)
+.+...++...+++..|++...|+. .++|..
T Consensus 148 t~LD~~r~~~~la~~lgv~~~~v~~-~v~G~H 178 (313)
T 1hye_A 148 THLDSLRFKVAIAKFFGVHIDEVRT-RIIGEH 178 (313)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGEEC-CEEECS
T ss_pred ccHHHHHHHHHHHHHhCcCHHHeEE-EEeecc
Confidence 6666677777777777876666664 566643
No 322
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=98.80 E-value=3e-08 Score=96.96 Aligned_cols=104 Identities=15% Similarity=0.127 Sum_probs=77.5
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD---GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
+|+|+|+|| |+||+.+++.|+++|. .|++.+|+.++.......... ....++..+.+|++|.+++.+++++.++
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~--~~~~~~~~~~~D~~d~~~l~~~l~~~~~ 77 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKA--KGYGEIDITTVDADSIEELVALINEVKP 77 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHH--TTCCCCEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhh--hcCCceEEEEecCCCHHHHHHHHHhhCC
Confidence 368999999 9999999999999983 899999976544333222211 1124688999999999999999998667
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
|+||||++... ...++++|.+.+. +++-+|
T Consensus 78 DvVin~ag~~~------------------~~~v~~a~l~~g~--~vvD~a 107 (405)
T 4ina_A 78 QIVLNIALPYQ------------------DLTIMEACLRTGV--PYLDTA 107 (405)
T ss_dssp SEEEECSCGGG------------------HHHHHHHHHHHTC--CEEESS
T ss_pred CEEEECCCccc------------------ChHHHHHHHHhCC--CEEEec
Confidence 99999997521 1357788888876 455443
No 323
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=98.80 E-value=4.4e-08 Score=91.91 Aligned_cols=166 Identities=13% Similarity=0.073 Sum_probs=98.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeC--CCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDN--FNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
|+|+||||+|++|..++..|+..|. +++++|+ +.++.+...............+.+.. | + .+++++.
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~a-- 71 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTAGS-- 71 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGTTC--
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhCCC--
Confidence 6899999999999999999999885 6888887 43322211111111111123344443 2 2 3456766
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc----cCCCCCCCCCCCCCCCCCCChH
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV----YGVNKKVPFSEKDRTDQPASLY 231 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v----yg~~~~~~~~e~~~~~~~~~~Y 231 (424)
|+|||+||..... .......+..|+.++.++++++.+.+.. .+|+++|--+ |-... .. ..++....
T Consensus 72 DvVi~~ag~~~~~--g~~r~dl~~~N~~i~~~i~~~i~~~~p~-~~viv~SNPv~~~~~~~~~-----~~--~~p~~rvi 141 (303)
T 1o6z_A 72 DVVVITAGIPRQP--GQTRIDLAGDNAPIMEDIQSSLDEHNDD-YISLTTSNPVDLLNRHLYE-----AG--DRSREQVI 141 (303)
T ss_dssp SEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHTTCSC-CEEEECCSSHHHHHHHHHH-----HS--SSCGGGEE
T ss_pred CEEEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHHCCC-cEEEEeCChHHHHHHHHHH-----Hc--CCCHHHee
Confidence 9999999974321 2244678999999999999999999876 5666666211 00000 00 00112223
Q ss_pred HH-HHHHHHHHHHHHHHHhCCcEEEEEeccccCCC
Q 042406 232 AA-TKKAGEAIAHAYNHIYGLSITGLRFFTVYGPW 265 (424)
Q Consensus 232 ~~-sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~ 265 (424)
|. +-+..-++...+++..|+...-|+ +.|+|..
T Consensus 142 G~gt~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~H 175 (303)
T 1o6z_A 142 GFGGRLDSARFRYVLSEEFDAPVQNVE-GTILGEH 175 (303)
T ss_dssp ECCHHHHHHHHHHHHHHHHTCCGGGEE-CCEEECS
T ss_pred ecccchhHHHHHHHHHHHhCcCHHHeE-EEEEeCC
Confidence 33 333334455555566677656666 7788854
No 324
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.73 E-value=8.1e-08 Score=79.27 Aligned_cols=102 Identities=15% Similarity=0.132 Sum_probs=71.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~ 155 (424)
.++++|+|+|+ |.+|..+++.|.+.|++|++++++.+.. +.....+..++.+|.++.+.+.++ +.+.
T Consensus 4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~---------~~~~~~~~~~~~~d~~~~~~l~~~~~~~~-- 71 (144)
T 2hmt_A 4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV---------NAYASYATHAVIANATEENELLSLGIRNF-- 71 (144)
T ss_dssp --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH---------HTTTTTCSEEEECCTTCHHHHHTTTGGGC--
T ss_pred CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH---------HHHHHhCCEEEEeCCCCHHHHHhcCCCCC--
Confidence 45678999998 9999999999999999999999853211 111223457788999998887765 5555
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCC
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSS 207 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~ 207 (424)
|+||++++.. ...|. .+++.+++.++. ++|..++.
T Consensus 72 d~vi~~~~~~------------~~~~~----~~~~~~~~~~~~-~ii~~~~~ 106 (144)
T 2hmt_A 72 EYVIVAIGAN------------IQAST----LTTLLLKELDIP-NIWVKAQN 106 (144)
T ss_dssp SEEEECCCSC------------HHHHH----HHHHHHHHTTCS-EEEEECCS
T ss_pred CEEEECCCCc------------hHHHH----HHHHHHHHcCCC-eEEEEeCC
Confidence 9999998641 01222 356667777765 77766653
No 325
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=98.65 E-value=8.4e-08 Score=85.15 Aligned_cols=78 Identities=19% Similarity=0.195 Sum_probs=58.1
Q ss_pred CCCCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEcc
Q 042406 76 STRGLTVLVTGA----------------AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD 139 (424)
Q Consensus 76 ~~~~~~vlItGg----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D 139 (424)
.+.||+|||||| +|++|.++++.|+++|++|+++++...- . ...++. .+|
T Consensus 5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~-----------~~~g~~--~~d 70 (226)
T 1u7z_A 5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P-----------TPPFVK--RVD 70 (226)
T ss_dssp TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C-----------CCTTEE--EEE
T ss_pred CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c-----------cCCCCe--EEc
Confidence 468999999999 6999999999999999999999885421 0 012333 468
Q ss_pred CCCHHHHHHHhhc-c-CccEEEEcccccCc
Q 042406 140 INDKSLLDKIFNV-V-AFTHVMHLAAQAGV 167 (424)
Q Consensus 140 l~d~~~v~~~~~~-~-~~d~vi~~Ag~~~~ 167 (424)
+.+.+++.+.+.. . ++|++|||||+...
T Consensus 71 v~~~~~~~~~v~~~~~~~Dili~~Aav~d~ 100 (226)
T 1u7z_A 71 VMTALEMEAAVNASVQQQNIFIGCAAVADY 100 (226)
T ss_dssp CCSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred cCcHHHHHHHHHHhcCCCCEEEECCcccCC
Confidence 8887765544322 2 46999999998654
No 326
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.60 E-value=3.5e-07 Score=75.44 Aligned_cols=74 Identities=23% Similarity=0.306 Sum_probs=57.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d 156 (424)
.+++|+|+|+ |.+|+.+++.|.++|++|++++++.+..+. ....++.++.+|.+|++.++++ ++ +.|
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~---------~~~~~~~~~~gd~~~~~~l~~~~~~--~~d 72 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIEL---------LEDEGFDAVIADPTDESFYRSLDLE--GVS 72 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH---------HHHTTCEEEECCTTCHHHHHHSCCT--TCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHH---------HHHCCCcEEECCCCCHHHHHhCCcc--cCC
Confidence 4678999998 999999999999999999999995432111 1124678899999999988876 23 459
Q ss_pred EEEEccc
Q 042406 157 HVMHLAA 163 (424)
Q Consensus 157 ~vi~~Ag 163 (424)
+||.+.+
T Consensus 73 ~vi~~~~ 79 (141)
T 3llv_A 73 AVLITGS 79 (141)
T ss_dssp EEEECCS
T ss_pred EEEEecC
Confidence 9998765
No 327
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=98.59 E-value=1.5e-07 Score=83.80 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=55.2
Q ss_pred CCCeEEEEcC----------------CChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCC
Q 042406 78 RGLTVLVTGA----------------AGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN 141 (424)
Q Consensus 78 ~~~~vlItGg----------------~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~ 141 (424)
.||+|||||| +|++|.++++.|+++|++|++++|..+... ....++.++ |+.
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~----------~~~~~~~~~--~v~ 69 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP----------EPHPNLSIR--EIT 69 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC----------CCCTTEEEE--ECC
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------cCCCCeEEE--EHh
Confidence 5899999999 899999999999999999999999543110 001345554 555
Q ss_pred CHHHHHHHhhc-c-CccEEEEcccccCch
Q 042406 142 DKSLLDKIFNV-V-AFTHVMHLAAQAGVR 168 (424)
Q Consensus 142 d~~~v~~~~~~-~-~~d~vi~~Ag~~~~~ 168 (424)
+.+++.+.+.. . +.|++||+||+....
T Consensus 70 s~~em~~~v~~~~~~~Dili~aAAvsD~~ 98 (232)
T 2gk4_A 70 NTKDLLIEMQERVQDYQVLIHSMAVSDYT 98 (232)
T ss_dssp SHHHHHHHHHHHGGGCSEEEECSBCCSEE
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCcccccc
Confidence 65443333221 1 359999999986643
No 328
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.48 E-value=9.1e-07 Score=72.48 Aligned_cols=99 Identities=18% Similarity=0.262 Sum_probs=67.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d 156 (424)
.+|+|+|+|+ |.+|..+++.|.+.|++|++++|+.+... ... ...++.++.+|..+.+.+.+. +++ .|
T Consensus 3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~----~~~----~~~~~~~~~~d~~~~~~l~~~~~~~--~d 71 (140)
T 1lss_A 3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICK----KAS----AEIDALVINGDCTKIKTLEDAGIED--AD 71 (140)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHH----HHCSSEEEESCTTSHHHHHHTTTTT--CS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH----HHH----HhcCcEEEEcCCCCHHHHHHcCccc--CC
Confidence 3578999987 99999999999999999999998543211 111 112567888999998877654 454 49
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
+||++.+. . ..|. .+.+.++..+.. ++|..+
T Consensus 72 ~vi~~~~~---------~----~~~~----~~~~~~~~~~~~-~ii~~~ 102 (140)
T 1lss_A 72 MYIAVTGK---------E----EVNL----MSSLLAKSYGIN-KTIARI 102 (140)
T ss_dssp EEEECCSC---------H----HHHH----HHHHHHHHTTCC-CEEEEC
T ss_pred EEEEeeCC---------c----hHHH----HHHHHHHHcCCC-EEEEEe
Confidence 99998642 0 1222 355566666665 666543
No 329
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.46 E-value=6.4e-07 Score=88.60 Aligned_cols=107 Identities=19% Similarity=0.104 Sum_probs=74.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
++|+|+|+| +|++|+++++.|++.|++|++++|+.++... . .. ...++..+.+|++|.+++.++++++ |+
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~----l-a~--~~~~~~~~~~Dv~d~~~l~~~l~~~--Dv 71 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKK----L-SA--GVQHSTPISLDVNDDAALDAEVAKH--DL 71 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHH----T-TT--TCTTEEEEECCTTCHHHHHHHHTTS--SE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHH----H-HH--hcCCceEEEeecCCHHHHHHHHcCC--cE
Confidence 468899998 7999999999999999999999995422111 1 11 1124778999999999999999855 99
Q ss_pred EEEcccccCchhhccChHHHHHH--H-------HHHHHHHHHHHHhcCC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVES--N-------IAGFVNLLETCKSSDP 197 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~--N-------~~g~~~ll~a~~~~~~ 197 (424)
||||++...... -....+.. | ...+.+++++|++.++
T Consensus 72 VIn~a~~~~~~~---i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv 117 (450)
T 1ff9_A 72 VISLIPYTFHAT---VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGI 117 (450)
T ss_dssp EEECCC--CHHH---HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTC
T ss_pred EEECCccccchH---HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCC
Confidence 999998643210 01122221 1 1356788999999875
No 330
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.42 E-value=9.4e-07 Score=85.19 Aligned_cols=95 Identities=20% Similarity=0.136 Sum_probs=71.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
-+.|+|+|.|| |++|+.+++.|.+ .++|.+.+|+.+..+. ....+..+.+|+.|.+++.+++++. |
T Consensus 14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~----------~~~~~~~~~~d~~d~~~l~~~~~~~--D 79 (365)
T 3abi_A 14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEK----------VKEFATPLKVDASNFDKLVEVMKEF--E 79 (365)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHH----------HTTTSEEEECCTTCHHHHHHHHTTC--S
T ss_pred CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHH----------HhccCCcEEEecCCHHHHHHHHhCC--C
Confidence 34578999998 9999999998855 5899999985432211 1245678899999999999999987 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
+|||+++... ...++++|.+++. ++|=+|
T Consensus 80 vVi~~~p~~~------------------~~~v~~~~~~~g~--~yvD~s 108 (365)
T 3abi_A 80 LVIGALPGFL------------------GFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp EEEECCCGGG------------------HHHHHHHHHHHTC--EEEECC
T ss_pred EEEEecCCcc------------------cchHHHHHHhcCc--ceEeee
Confidence 9999986521 1357888988885 676555
No 331
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.40 E-value=2.9e-06 Score=79.85 Aligned_cols=116 Identities=20% Similarity=0.122 Sum_probs=79.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+|.|+||+|++|..++..|+..| .+|+++|++. ...... ..........+..+. ...+.++++++. |+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~-dL~~~~~~~~l~~~~----~t~d~~~a~~~a--Dv 71 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAA-DLSHIETRATVKGYL----GPEQLPDCLKGC--DV 71 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHH-HHTTSSSSCEEEEEE----SGGGHHHHHTTC--SE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHH-HHhccCcCceEEEec----CCCCHHHHhCCC--CE
Confidence 689999999999999999999998 7899999965 111111 111111111122211 113466678877 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
||++||..... .......+..|+..+..+++.+.+.....+||++|-
T Consensus 72 Vvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN 118 (314)
T 1mld_A 72 VVIPAGVPRKP--GMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (314)
T ss_dssp EEECCSCCCCT--TCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred EEECCCcCCCC--CCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 99999974322 223356789999999999999998876667887764
No 332
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=98.34 E-value=7.8e-07 Score=84.20 Aligned_cols=171 Identities=12% Similarity=0.124 Sum_probs=101.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--e-----EEEEeCCCC--chhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHh
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD--G-----VLGLDNFNN--YYETSLKKARKGLLERAGVFVIDADINDKSLLDKIF 150 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~ 150 (424)
++|+||||+|+||.+++..|+..|. + ++++|++.. .......... . ...+-+. ++...+...+.+
T Consensus 4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~-~-~~~~~~~----~~~~~~~~~~~~ 77 (333)
T 5mdh_A 4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQ-D-CALPLLK----DVIATDKEEIAF 77 (333)
T ss_dssp EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHH-H-TCCTTEE----EEEEESCHHHHT
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhH-h-hhhcccC----CEEEcCCcHHHh
Confidence 6899999999999999999998875 5 899988432 1111111111 1 0111121 222223356678
Q ss_pred hccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCC-eEEEecCCc---ccCCCCCCCCCCCCCCCC
Q 042406 151 NVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQP-AIVWASSSS---VYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 151 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~-~~v~~SS~~---vyg~~~~~~~~e~~~~~~ 226 (424)
++. |+||++||.... .-.+..+.++.|...+.++++++.+++... +++.+|... .|-... .. ...
T Consensus 78 ~da--DvVvitAg~prk--pG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd~~t~~~~~------~~-~~~ 146 (333)
T 5mdh_A 78 KDL--DVAILVGSMPRR--DGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPANTNCLTASK------SA-PSI 146 (333)
T ss_dssp TTC--SEEEECCSCCCC--TTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHH------TC-TTS
T ss_pred CCC--CEEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchHHHHHHHHH------Hc-CCC
Confidence 877 999999986432 223456789999999999999999998754 477777521 110000 00 001
Q ss_pred CCChH-HHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 227 PASLY-AATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 227 ~~~~Y-~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
|.... +.+-+..-++-..+++..|+....|+-..|+|..++
T Consensus 147 p~~~ig~~t~LDs~R~~~~la~~l~v~~~~v~~~vV~GeHgd 188 (333)
T 5mdh_A 147 PKENFSCLTRLDHNRAKAQIALKLGVTSDDVKNVIIWGNHSS 188 (333)
T ss_dssp CGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred CcCEEEEEEhHHHHHHHHHHHHHhCcCHHHeeecEEEEcCCC
Confidence 11112 233444445555566666877777775556886554
No 333
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.32 E-value=1e-05 Score=67.70 Aligned_cols=77 Identities=16% Similarity=0.271 Sum_probs=58.8
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhc-cCCeEEEEccCCCHHHHHHH-hhc
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLE-RAGVFVIDADINDKSLLDKI-FNV 152 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~v~~~~~Dl~d~~~v~~~-~~~ 152 (424)
....+++|+|+|+ |.+|..+++.|.+.|++|++++|+.+.... .. ..++.++.+|..+.+.+.++ +++
T Consensus 15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~---------~~~~~g~~~~~~d~~~~~~l~~~~~~~ 84 (155)
T 2g1u_A 15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR---------LNSEFSGFTVVGDAAEFETLKECGMEK 84 (155)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG---------SCTTCCSEEEESCTTSHHHHHTTTGGG
T ss_pred cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH---------HHhcCCCcEEEecCCCHHHHHHcCccc
Confidence 4567789999996 999999999999999999999996543211 12 24567788999998877765 555
Q ss_pred cCccEEEEccc
Q 042406 153 VAFTHVMHLAA 163 (424)
Q Consensus 153 ~~~d~vi~~Ag 163 (424)
. |+||.+.+
T Consensus 85 a--d~Vi~~~~ 93 (155)
T 2g1u_A 85 A--DMVFAFTN 93 (155)
T ss_dssp C--SEEEECSS
T ss_pred C--CEEEEEeC
Confidence 5 99999875
No 334
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.29 E-value=4.1e-06 Score=83.03 Aligned_cols=79 Identities=27% Similarity=0.255 Sum_probs=60.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
.+++|+|+|+|+ |++|+.++..|++. |++|++++|+.++... .... .++.++.+|+.|.+++.++++++
T Consensus 20 ~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~----la~~----~~~~~~~~D~~d~~~l~~~l~~~- 89 (467)
T 2axq_A 20 RHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQA----LAKP----SGSKAISLDVTDDSALDKVLADN- 89 (467)
T ss_dssp ---CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHH----HHGG----GTCEEEECCTTCHHHHHHHHHTS-
T ss_pred CCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHH----HHHh----cCCcEEEEecCCHHHHHHHHcCC-
Confidence 456789999997 99999999999998 7899999996432211 1111 24677889999999999998866
Q ss_pred ccEEEEccccc
Q 042406 155 FTHVMHLAAQA 165 (424)
Q Consensus 155 ~d~vi~~Ag~~ 165 (424)
|+|||+++..
T Consensus 90 -DvVIn~tp~~ 99 (467)
T 2axq_A 90 -DVVISLIPYT 99 (467)
T ss_dssp -SEEEECSCGG
T ss_pred -CEEEECCchh
Confidence 9999999864
No 335
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.29 E-value=6e-06 Score=78.29 Aligned_cols=119 Identities=14% Similarity=0.102 Sum_probs=78.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
+++++|.|+|++|++|..++..++..| .+|+++|++.++................++.+ .....+++++.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-------t~d~~~al~dA- 77 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-------TSDIKEALTDA- 77 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-------ESCHHHHHTTE-
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-------cCCHHHHhCCC-
Confidence 456899999999999999999999998 58999998654333222111111111112221 12345667777
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCe-EEEecC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPA-IVWASS 206 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~-~v~~SS 206 (424)
|+||.+||.... .-....+.+..|......+++.+.+...... ++.+|.
T Consensus 78 -DvVvitaG~p~k--pG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN 127 (343)
T 3fi9_A 78 -KYIVSSGGAPRK--EGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN 127 (343)
T ss_dssp -EEEEECCC---------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred -CEEEEccCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence 999999996321 2234567899999999999999998887654 566664
No 336
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.24 E-value=6.3e-06 Score=68.88 Aligned_cols=78 Identities=23% Similarity=0.266 Sum_probs=58.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d 156 (424)
..++|+|+|+ |.+|+.+++.|.+.|++|++++++....... .. .....++.++.+|.+|++.+.++ +++. |
T Consensus 2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~---~~--~~~~~~~~~i~gd~~~~~~l~~a~i~~a--d 73 (153)
T 1id1_A 2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQ---LE--QRLGDNADVIPGDSNDSSVLKKAGIDRC--R 73 (153)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHH---HH--HHHCTTCEEEESCTTSHHHHHHHTTTTC--S
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHH---HH--HhhcCCCeEEEcCCCCHHHHHHcChhhC--C
Confidence 3467999996 9999999999999999999999853210001 11 11124689999999999998887 7766 9
Q ss_pred EEEEccc
Q 042406 157 HVMHLAA 163 (424)
Q Consensus 157 ~vi~~Ag 163 (424)
+||.+.+
T Consensus 74 ~vi~~~~ 80 (153)
T 1id1_A 74 AILALSD 80 (153)
T ss_dssp EEEECSS
T ss_pred EEEEecC
Confidence 9998764
No 337
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=98.16 E-value=2.8e-06 Score=74.26 Aligned_cols=101 Identities=19% Similarity=0.148 Sum_probs=65.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh---ccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN---VVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~---~~~ 154 (424)
.+++|+|+||+|+||..+++.+...|++|++++|+.+..+ ..+ + . +... ..|..+.+..+.+.+ +.+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~----~~~-~-~---g~~~-~~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLS-R-L---GVEY-VGDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHH-T-T---CCSE-EEETTCSTHHHHHHHHTTTCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHH-H-c---CCCE-EeeCCcHHHHHHHHHHhCCCC
Confidence 5788999999999999999999999999999998543211 111 1 1 2222 247766554444433 225
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV 209 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v 209 (424)
+|+||+|+|. . .....++.++..| ++|.+++...
T Consensus 108 ~D~vi~~~g~---~---------------~~~~~~~~l~~~G---~~v~~g~~~~ 141 (198)
T 1pqw_A 108 VDVVLNSLAG---E---------------AIQRGVQILAPGG---RFIELGKKDV 141 (198)
T ss_dssp EEEEEECCCT---H---------------HHHHHHHTEEEEE---EEEECSCGGG
T ss_pred CeEEEECCch---H---------------HHHHHHHHhccCC---EEEEEcCCCC
Confidence 7999999873 1 1233445555433 8888887543
No 338
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.15 E-value=1.2e-05 Score=69.37 Aligned_cols=76 Identities=24% Similarity=0.309 Sum_probs=58.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH--hhc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI--FNV 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~--~~~ 152 (424)
...+++|+|+|+ |.+|..+++.|.+. |++|++++++.+.... ....++.++.+|.++.+.+.++ +++
T Consensus 36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~---------~~~~g~~~~~gd~~~~~~l~~~~~~~~ 105 (183)
T 3c85_A 36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQ---------HRSEGRNVISGDATDPDFWERILDTGH 105 (183)
T ss_dssp CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHH---------HHHTTCCEEECCTTCHHHHHTBCSCCC
T ss_pred CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHH---------HHHCCCCEEEcCCCCHHHHHhccCCCC
Confidence 355778999985 99999999999999 9999999995432111 1124677888999998887776 555
Q ss_pred cCccEEEEccc
Q 042406 153 VAFTHVMHLAA 163 (424)
Q Consensus 153 ~~~d~vi~~Ag 163 (424)
. |+||.+.+
T Consensus 106 a--d~vi~~~~ 114 (183)
T 3c85_A 106 V--KLVLLAMP 114 (183)
T ss_dssp C--CEEEECCS
T ss_pred C--CEEEEeCC
Confidence 4 99998764
No 339
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.05 E-value=4.5e-05 Score=71.81 Aligned_cols=117 Identities=19% Similarity=0.135 Sum_probs=80.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhh-hhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKG-LLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..|+|.|+|+ |.+|..++..|+..|. +|+++|++.+..+......... .....++.....| . +.+++.
T Consensus 4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~----~a~~~a- 74 (326)
T 3pqe_A 4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y----EDCKDA- 74 (326)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G----GGGTTC-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H----HHhCCC-
Confidence 4678999996 9999999999999986 8999999654333222112211 1111344544333 2 356666
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||.+||.... .-.+..+.+..|..-...+++.+.+......++.+|-
T Consensus 75 -DvVvi~ag~p~k--pG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 75 -DIVCICAGANQK--PGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp -SEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred -CEEEEecccCCC--CCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 999999986321 1234567899999999999999998877656776664
No 340
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.00 E-value=7.6e-05 Score=61.22 Aligned_cols=73 Identities=14% Similarity=0.183 Sum_probs=57.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d~ 157 (424)
.++|+|.|+ |.+|..+++.|.+.|++|++++++.+..+. ....++.++.+|.++.+.+.++ +++. |+
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~---------~~~~g~~~i~gd~~~~~~l~~a~i~~a--d~ 74 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDE---------LRERGVRAVLGNAANEEIMQLAHLECA--KW 74 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHH---------HHHTTCEEEESCTTSHHHHHHTTGGGC--SE
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH---------HHHcCCCEEECCCCCHHHHHhcCcccC--CE
Confidence 357999997 999999999999999999999996432211 1225788999999999988775 4444 99
Q ss_pred EEEccc
Q 042406 158 VMHLAA 163 (424)
Q Consensus 158 vi~~Ag 163 (424)
||-+.+
T Consensus 75 vi~~~~ 80 (140)
T 3fwz_A 75 LILTIP 80 (140)
T ss_dssp EEECCS
T ss_pred EEEECC
Confidence 987754
No 341
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=97.97 E-value=3.2e-05 Score=72.79 Aligned_cols=119 Identities=15% Similarity=0.098 Sum_probs=70.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
...+++|.|+|+ |.+|..++..|+..|. +|+++|++.+..+...............+.....| . +.+++.
T Consensus 6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~---~----~a~~~a 77 (326)
T 3vku_A 6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE---Y----SDAKDA 77 (326)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC---G----GGGTTC
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc---H----HHhcCC
Confidence 346789999997 9999999999999986 89999986543332222221111111244444332 2 356666
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||.+||.... .-.+..+.+..|..-...+.+.+.+......++.+|-
T Consensus 78 --DiVvi~ag~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 78 --DLVVITAGAPQK--PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp --SEEEECCCCC------------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred --CEEEECCCCCCC--CCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 999999996321 1223456788899989999999998877656776664
No 342
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.90 E-value=5e-05 Score=71.05 Aligned_cols=82 Identities=15% Similarity=0.146 Sum_probs=59.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCC---chhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNN---YYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
.+++|+++|+|+ |++|+.++..|++.|. +|++++|+.+ +.+....... ...++.+...++.+.+.+.+.+.
T Consensus 151 ~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~----~~~~~~~~~~~~~~~~~l~~~l~ 225 (315)
T 3tnl_A 151 DIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKIN----SKTDCKAQLFDIEDHEQLRKEIA 225 (315)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHH----HHSSCEEEEEETTCHHHHHHHHH
T ss_pred CccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhh----hhcCCceEEeccchHHHHHhhhc
Confidence 467999999997 8999999999999998 8999999732 2222211111 11234455567888788888888
Q ss_pred ccCccEEEEcccc
Q 042406 152 VVAFTHVMHLAAQ 164 (424)
Q Consensus 152 ~~~~d~vi~~Ag~ 164 (424)
+. |+|||+...
T Consensus 226 ~a--DiIINaTp~ 236 (315)
T 3tnl_A 226 ES--VIFTNATGV 236 (315)
T ss_dssp TC--SEEEECSST
T ss_pred CC--CEEEECccC
Confidence 66 999998764
No 343
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=97.83 E-value=3.2e-05 Score=68.58 Aligned_cols=73 Identities=16% Similarity=0.215 Sum_probs=56.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCccEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFTHV 158 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d~v 158 (424)
|+|+|+|+ |.+|+.+++.|.++|++|++++++.+.... .. ...++.++.+|.+|.+.+.++ +++. |+|
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~----l~----~~~~~~~i~gd~~~~~~l~~a~i~~a--d~v 69 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEE----FA----KKLKATIIHGDGSHKEILRDAEVSKN--DVV 69 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHH----HH----HHSSSEEEESCTTSHHHHHHHTCCTT--CEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH----HH----HHcCCeEEEcCCCCHHHHHhcCcccC--CEE
Confidence 67999997 999999999999999999999985432211 11 123678999999999998876 5555 999
Q ss_pred EEccc
Q 042406 159 MHLAA 163 (424)
Q Consensus 159 i~~Ag 163 (424)
|-+.+
T Consensus 70 i~~~~ 74 (218)
T 3l4b_C 70 VILTP 74 (218)
T ss_dssp EECCS
T ss_pred EEecC
Confidence 97653
No 344
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=97.83 E-value=0.00019 Score=67.48 Aligned_cols=119 Identities=10% Similarity=0.052 Sum_probs=78.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhh-hccCCeEEE-EccCCCHHHHHHHhhc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGL-LERAGVFVI-DADINDKSLLDKIFNV 152 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~-~~Dl~d~~~v~~~~~~ 152 (424)
++++++|.|+|+ |.+|..++..|+..|. +|+++|++.+..+.......... .......+. ..| . +++++
T Consensus 4 ~m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d---~----~a~~~ 75 (324)
T 3gvi_A 4 SMARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND---Y----AAIEG 75 (324)
T ss_dssp --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS---G----GGGTT
T ss_pred CCcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC---H----HHHCC
Confidence 356789999998 9999999999999998 99999998766442222211111 111122222 223 2 45676
Q ss_pred cCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 153 VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 153 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
. |+||.+||..... -....+.+..|..-...+++.+.+......++.+|-
T Consensus 76 a--DiVIiaag~p~k~--G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 76 A--DVVIVTAGVPRKP--GMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp C--SEEEECCSCCCC-------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred C--CEEEEccCcCCCC--CCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 6 9999999863211 123346788899999999999988876657776664
No 345
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.82 E-value=5.9e-05 Score=72.36 Aligned_cols=94 Identities=20% Similarity=0.179 Sum_probs=68.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.+++|+|.|+ |++|+.+++.|++. ++|++.+|+.++.+. .. .....+.+|+.|.+++.+++++. |+
T Consensus 15 ~~~~v~IiGa-G~iG~~ia~~L~~~-~~V~V~~R~~~~a~~---------la-~~~~~~~~d~~~~~~l~~ll~~~--Dv 80 (365)
T 2z2v_A 15 RHMKVLILGA-GNIGRAIAWDLKDE-FDVYIGDVNNENLEK---------VK-EFATPLKVDASNFDKLVEVMKEF--EL 80 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTTT-SEEEEEESCHHHHHH---------HT-TTSEEEECCTTCHHHHHHHHTTC--SC
T ss_pred CCCeEEEEcC-CHHHHHHHHHHHcC-CeEEEEECCHHHHHH---------HH-hhCCeEEEecCCHHHHHHHHhCC--CE
Confidence 5678999997 99999999999999 999999996432211 11 23355778999999999999976 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
|||+.... . ...++++|.+.+. +++-+|
T Consensus 81 VIn~~P~~-----~-------------~~~v~~a~l~~G~--~~vD~s 108 (365)
T 2z2v_A 81 VIGALPGF-----L-------------GFKSIKAAIKSKV--DMVDVS 108 (365)
T ss_dssp EEECCCHH-----H-------------HHHHHHHHHHTTC--CEEECC
T ss_pred EEECCChh-----h-------------hHHHHHHHHHhCC--eEEEcc
Confidence 99985320 0 0135677877775 566554
No 346
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.81 E-value=7.4e-05 Score=71.90 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=58.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...+++|+|+|+ |.||..+++.|...|++|++++|+.++.+.. . +... .. +.+|..+.+.+.+++.+.
T Consensus 163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~----~-~~~g-~~---~~~~~~~~~~l~~~~~~~-- 230 (369)
T 2eez_A 163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYL----D-DVFG-GR---VITLTATEANIKKSVQHA-- 230 (369)
T ss_dssp BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----H-HHTT-TS---EEEEECCHHHHHHHHHHC--
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----H-HhcC-ce---EEEecCCHHHHHHHHhCC--
Confidence 366799999999 9999999999999999999999964322111 1 1111 11 456888888999998877
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||++++..
T Consensus 231 DvVi~~~g~~ 240 (369)
T 2eez_A 231 DLLIGAVLVP 240 (369)
T ss_dssp SEEEECCC--
T ss_pred CEEEECCCCC
Confidence 9999999863
No 347
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=97.79 E-value=2.8e-05 Score=73.72 Aligned_cols=78 Identities=23% Similarity=0.234 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc---c
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV---V 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~---~ 153 (424)
..+++|+||||+|+||..+++.+...|++|++++++.++.+. . ... +.. ..+|..+.+.+.+.+.+ -
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~----~--~~~---g~~-~~~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----L--KQI---GFD-AAFNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH----H--HHT---TCS-EEEETTSCSCHHHHHHHHCTT
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH----H--Hhc---CCc-EEEecCCHHHHHHHHHHHhCC
Confidence 357899999999999999999999999999999985432211 1 111 111 23477663333333321 2
Q ss_pred CccEEEEcccc
Q 042406 154 AFTHVMHLAAQ 164 (424)
Q Consensus 154 ~~d~vi~~Ag~ 164 (424)
++|+||+|+|.
T Consensus 214 ~~d~vi~~~g~ 224 (333)
T 1v3u_A 214 GYDCYFDNVGG 224 (333)
T ss_dssp CEEEEEESSCH
T ss_pred CCeEEEECCCh
Confidence 57999999983
No 348
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=97.78 E-value=0.00018 Score=66.63 Aligned_cols=116 Identities=12% Similarity=0.062 Sum_probs=78.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhh-ccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLL-ERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+|.|+|+ |.+|..++..|+..|. +|+++|++.+..+........... ......+... +| .+++++. |
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~a~~~a--D 71 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YSLLKGS--E 71 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GGGGTTC--S
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HHHhCCC--C
Confidence 68999999 9999999999999997 899999976543321111111110 1122222211 12 3456766 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
+||.+||.... .-.+..+.+..|..-...+.+.+.+.+....++.+|.
T Consensus 72 iVViaag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 72 IIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EEEECCCCCCC--SSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEEECCCCCCC--CCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 99999987421 1234567889999999999999999877667777775
No 349
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.76 E-value=0.00037 Score=65.44 Aligned_cols=119 Identities=15% Similarity=0.089 Sum_probs=80.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
++.|+|.|+|+ |.+|..++..|+..|. +|+++|++.+..+.......... .......+... .|. +++++.
T Consensus 3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a~~~a- 74 (321)
T 3p7m_A 3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDY----KDLENS- 74 (321)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGTTC-
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCH----HHHCCC-
Confidence 34678999995 9999999999999988 99999998765433222221111 11122233211 122 466766
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||.+||.... .-....+.+..|..-...+++.+.+......++.+|-
T Consensus 75 -DvVIi~ag~p~k--~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 123 (321)
T 3p7m_A 75 -DVVIVTAGVPRK--PGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICITN 123 (321)
T ss_dssp -SEEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred -CEEEEcCCcCCC--CCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 999999986432 1224467888999999999999988876656776653
No 350
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.71 E-value=0.00038 Score=65.55 Aligned_cols=120 Identities=15% Similarity=0.154 Sum_probs=79.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
....++|.|+|+ |.+|..++..|+.+|. +|+++|++.+..+..................+.. .|++ .+++.
T Consensus 16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----~~~~a 88 (331)
T 4aj2_A 16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----VTANS 88 (331)
T ss_dssp -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----GGTTE
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----HhCCC
Confidence 456789999998 9999999999999986 8999998654333222222111101111122222 2332 46666
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||.+||.... .-....+.+..|..-...+.+.+.+......++.+|-
T Consensus 89 --DiVvi~aG~~~k--pG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 89 --KLVIITAGARQQ--EGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp --EEEEECCSCCCC--TTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred --CEEEEccCCCCC--CCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999999997432 2234567899999999999999988876657777764
No 351
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.70 E-value=3.2e-05 Score=73.13 Aligned_cols=76 Identities=14% Similarity=0.104 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh---ccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN---VVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~---~~~ 154 (424)
.+++|+|+||+|+||..+++.+...|++|++++|+.++.+.. + + .. .. ...|..+.+..+++.+ +.+
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~----~-~-~g---~~-~~~~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA----L-K-AG---AW-QVINYREEDLVERLKEITGGKK 209 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----H-H-HT---CS-EEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----H-H-cC---CC-EEEECCCccHHHHHHHHhCCCC
Confidence 578999999999999999999999999999999854322111 1 1 11 11 1246666544444433 335
Q ss_pred ccEEEEccc
Q 042406 155 FTHVMHLAA 163 (424)
Q Consensus 155 ~d~vi~~Ag 163 (424)
+|+||+|+|
T Consensus 210 ~D~vi~~~g 218 (327)
T 1qor_A 210 VRVVYDSVG 218 (327)
T ss_dssp EEEEEECSC
T ss_pred ceEEEECCc
Confidence 799999998
No 352
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.69 E-value=4.2e-05 Score=72.95 Aligned_cols=76 Identities=26% Similarity=0.232 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHH----HHHHhhcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSL----LDKIFNVV 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~----v~~~~~~~ 153 (424)
.+++|+|+||+|.||..+++.+...|++|++++|+.++.+.. + + . +.. ...|+.+.++ +.++..+
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~----~-~-~---g~~-~~~d~~~~~~~~~~~~~~~~~- 237 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF----R-S-I---GGE-VFIDFTKEKDIVGAVLKATDG- 237 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH----H-H-T---TCC-EEEETTTCSCHHHHHHHHHTS-
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH----H-H-c---CCc-eEEecCccHhHHHHHHHHhCC-
Confidence 578999999999999999999999999999999876543211 1 1 1 111 2247764333 3333334
Q ss_pred CccEEEEcccc
Q 042406 154 AFTHVMHLAAQ 164 (424)
Q Consensus 154 ~~d~vi~~Ag~ 164 (424)
++|+||+++|.
T Consensus 238 ~~D~vi~~~g~ 248 (347)
T 2hcy_A 238 GAHGVINVSVS 248 (347)
T ss_dssp CEEEEEECSSC
T ss_pred CCCEEEECCCc
Confidence 67999999974
No 353
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.68 E-value=0.00011 Score=65.88 Aligned_cols=72 Identities=15% Similarity=0.074 Sum_probs=56.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d 156 (424)
..++|+|+|+ |.+|+.+++.|.+.|+ |++++++.+... ... .++.++.+|.+|.+.++++ +++. |
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~---------~~~-~~~~~i~gd~~~~~~l~~a~i~~a--d 73 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK---------VLR-SGANFVHGDPTRVSDLEKANVRGA--R 73 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHH---------HHH-TTCEEEESCTTCHHHHHHTTCTTC--S
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHH---------HHh-cCCeEEEcCCCCHHHHHhcCcchh--c
Confidence 3468999998 9999999999999999 999998543211 111 4688999999999998877 6666 9
Q ss_pred EEEEccc
Q 042406 157 HVMHLAA 163 (424)
Q Consensus 157 ~vi~~Ag 163 (424)
.||.+.+
T Consensus 74 ~vi~~~~ 80 (234)
T 2aef_A 74 AVIVDLE 80 (234)
T ss_dssp EEEECCS
T ss_pred EEEEcCC
Confidence 9997753
No 354
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=97.67 E-value=0.00031 Score=65.79 Aligned_cols=119 Identities=18% Similarity=0.129 Sum_probs=78.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCC--CchhhhHHHHHhh-hhccCCeEEEEccCCCHHHHHHHhhc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFN--NYYETSLKKARKG-LLERAGVFVIDADINDKSLLDKIFNV 152 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~~~ 152 (424)
++.++|.|+|+ |.+|..++..|+..|+ +|+++|++. ............. ........+... .|. +.+++
T Consensus 6 ~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~----~a~~~ 78 (315)
T 3tl2_A 6 IKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDY----ADTAD 78 (315)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGTT
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCH----HHhCC
Confidence 45689999997 9999999999999999 999999962 2221111111110 011112222211 122 35666
Q ss_pred cCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 153 VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 153 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
. |+||.+||....+ -.+..+.+..|..-...+.+.+.+......++.+|.
T Consensus 79 a--DvVIiaag~p~kp--g~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 79 S--DVVVITAGIARKP--GMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp C--SEEEECCSCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred C--CEEEEeCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 6 9999999874321 234567899999999999999988876657777664
No 355
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.67 E-value=0.00046 Score=64.78 Aligned_cols=117 Identities=17% Similarity=0.145 Sum_probs=77.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhh-hhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKG-LLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
+..|+|.|+|| |.+|..++..|+..| .+|.++|++.+..+......... ......+.+.. | + .+++++.
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~~a 75 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCHDA 75 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGTTC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhCCC
Confidence 35579999999 999999999999988 48999998654333211111111 11113334432 2 3 3446766
Q ss_pred CccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 154 AFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
|+||.++|..... -......+..|..-...+.+.+.+......++.+|
T Consensus 76 --DvVvi~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 76 --DLVVICAGAAQKP--GETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp --SEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred --CEEEECCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 9999999874321 23345678889999999999998887665666544
No 356
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=97.67 E-value=6.8e-05 Score=71.68 Aligned_cols=77 Identities=21% Similarity=0.211 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHH---HhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDK---IFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~---~~~~~~ 154 (424)
.+++|+|+||+|+||..+++.+...|++|++++++.++.+. . ..+ +.. ...|..+.+..++ ...+.+
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~--~~~---ga~-~~~d~~~~~~~~~~~~~~~~~~ 239 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI----V--LQN---GAH-EVFNHREVNYIDKIKKYVGEKG 239 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----H--HHT---TCS-EEEETTSTTHHHHHHHHHCTTC
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHH----H--HHc---CCC-EEEeCCCchHHHHHHHHcCCCC
Confidence 57899999999999999999999999999999986432221 1 111 111 2246666443333 333335
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+|+|.
T Consensus 240 ~D~vi~~~G~ 249 (351)
T 1yb5_A 240 IDIIIEMLAN 249 (351)
T ss_dssp EEEEEESCHH
T ss_pred cEEEEECCCh
Confidence 7999999973
No 357
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=97.66 E-value=7.9e-05 Score=70.95 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=64.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---HHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS---LLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~v~~~~~~~~ 154 (424)
.+++|||+||+|.||..+++.+...|++|++++++.++.+.. + ... ... ..|..+.+ .+.+.....+
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~----~--~~g---a~~-~~d~~~~~~~~~~~~~~~~~~ 235 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA----K--ALG---ADE-TVNYTHPDWPKEVRRLTGGKG 235 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH----H--HHT---CSE-EEETTSTTHHHHHHHHTTTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----H--hcC---CCE-EEcCCcccHHHHHHHHhCCCC
Confidence 578899999999999999999999999999999864332211 1 111 111 24666543 3334333336
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSS 207 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~ 207 (424)
+|+||+++|. .. ....++.++..+ ++|.+++.
T Consensus 236 ~d~vi~~~g~-~~-----------------~~~~~~~l~~~G---~~v~~g~~ 267 (343)
T 2eih_A 236 ADKVVDHTGA-LY-----------------FEGVIKATANGG---RIAIAGAS 267 (343)
T ss_dssp EEEEEESSCS-SS-----------------HHHHHHHEEEEE---EEEESSCC
T ss_pred ceEEEECCCH-HH-----------------HHHHHHhhccCC---EEEEEecC
Confidence 7999999982 21 233455555443 78877764
No 358
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.66 E-value=0.0005 Score=64.74 Aligned_cols=117 Identities=15% Similarity=0.087 Sum_probs=78.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
+.++|.|+|| |.+|..++..|+..+. +|+++|++.++.+...............+.+.. | + .+++++.
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~~a~~~a-- 77 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A--E----YSDAKDA-- 77 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGGGC--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCC--
Confidence 4578999999 9999999999998885 899999965444332222211111113444443 2 2 3447777
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||..++.... .-......+..|..-...+.+.+.+......++.+|-
T Consensus 78 DvVii~ag~~~k--~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 126 (326)
T 2zqz_A 78 DLVVITAGAPQK--PGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp SEEEECCCCC-------CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CEEEEcCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 999999987332 1233456788899999999999988876657777654
No 359
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=97.66 E-value=0.0004 Score=65.27 Aligned_cols=116 Identities=15% Similarity=0.112 Sum_probs=73.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
+.++|.|+|+ |++|..++..|+..|. +|+++|++.++.+...............+.+.. .+ .+++++.
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~---~~----~~a~~~a-- 75 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA---GD----YSDVKDC-- 75 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----C----GGGGTTC--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE---CC----HHHhCCC--
Confidence 3478999998 9999999999999987 899999987655432222211110112333321 23 3347766
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
|+||.+++.... ......+.+..|+.....+++.+.+......++.+|
T Consensus 76 DvVii~~g~p~k--~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (318)
T 1y6j_A 76 DVIVVTAGANRK--PGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 123 (318)
T ss_dssp SEEEECCCC--------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred CEEEEcCCCCCC--CCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence 999999986321 122345678899999999999998876654555543
No 360
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.65 E-value=0.00051 Score=64.20 Aligned_cols=116 Identities=16% Similarity=0.132 Sum_probs=77.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhh-hhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKG-LLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+|.|+|+ |.+|..++..|+..|. +|+++|++.+............ ......+.+...| + .+.+++. |
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~----~~a~~~a--D 71 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--D----YGPTEDS--D 71 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--S----SGGGTTC--S
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--C----HHHhCCC--C
Confidence 68999997 9999999999999986 8999999876543322222111 1111233333222 2 2356666 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
+||.+||.... .-.+..+.+..|..-...+.+.+.+......++.+|-
T Consensus 72 vVii~ag~~~k--pG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 72 VCIITAGLPRS--PGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp EEEECCCC---------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred EEEECCCCCCC--CCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 99999987321 1233467889999999999999998876656776664
No 361
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=97.63 E-value=9.1e-05 Score=70.18 Aligned_cols=77 Identities=21% Similarity=0.199 Sum_probs=53.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHH---HHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSL---LDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---v~~~~~~~~ 154 (424)
.+++|+|+||+|+||..+++.+...|++|++++|+.++.+.. + + .. .. ...|..+.+. +.+.....+
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~----~-~-~g---~~-~~~d~~~~~~~~~i~~~~~~~~ 214 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA----R-K-LG---CH-HTINYSTQDFAEVVREITGGKG 214 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH----H-H-HT---CS-EEEETTTSCHHHHHHHHHTTCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----H-H-cC---CC-EEEECCCHHHHHHHHHHhCCCC
Confidence 578899999999999999999999999999999964322211 1 1 11 11 1236665443 333333336
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+|+|.
T Consensus 215 ~d~vi~~~g~ 224 (333)
T 1wly_A 215 VDVVYDSIGK 224 (333)
T ss_dssp EEEEEECSCT
T ss_pred CeEEEECCcH
Confidence 7999999985
No 362
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=97.63 E-value=4.5e-05 Score=63.97 Aligned_cols=73 Identities=15% Similarity=0.098 Sum_probs=52.3
Q ss_pred ChhHHHHHHHHHhCCCeEEEEeCCCCchhh---hHHHHHhhhhccCCeEEEEccCCCH--HHHHHHhhcc----CccEEE
Q 042406 89 GFVGSHVSLALKKRGDGVLGLDNFNNYYET---SLKKARKGLLERAGVFVIDADINDK--SLLDKIFNVV----AFTHVM 159 (424)
Q Consensus 89 G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~~v~~~~~Dl~d~--~~v~~~~~~~----~~d~vi 159 (424)
|.++..+++.|++.|++|++..|....... ....... .+..+..+.+|++++ +++.++++.+ +-|++|
T Consensus 26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~---~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dVLV 102 (157)
T 3gxh_A 26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ---AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDVLV 102 (157)
T ss_dssp BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH---TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH---cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 578999999999999999998886543221 1111111 134567788999999 8888877644 239999
Q ss_pred Ecccc
Q 042406 160 HLAAQ 164 (424)
Q Consensus 160 ~~Ag~ 164 (424)
||||.
T Consensus 103 nnAgg 107 (157)
T 3gxh_A 103 HCLAN 107 (157)
T ss_dssp ECSBS
T ss_pred ECCCC
Confidence 99986
No 363
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.59 E-value=0.00047 Score=64.70 Aligned_cols=116 Identities=14% Similarity=0.094 Sum_probs=75.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
.++|.|+|| |.+|..++..|+..+. +|+++|++.++.+...............+.+.. | + .+++++. |
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~a~~~a--D 74 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G--E----YSDCKDA--D 74 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C--C----GGGGTTC--S
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C--C----HHHhCCC--C
Confidence 378999999 9999999999999885 899999965444332222221111113444443 2 2 3447766 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
+||..++..... -....+.+..|..-...+.+.+.+......++.+|-
T Consensus 75 vVii~ag~~~~~--g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 75 LVVITAGAPQKP--GESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp EEEECCCC------------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 999999874321 122345778899999999999998877667776654
No 364
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=97.59 E-value=0.0004 Score=64.90 Aligned_cols=116 Identities=17% Similarity=0.099 Sum_probs=76.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-C--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR-G--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+|.|+||+|.+|..++..|+.+ + .+++++|++. ....... .... . ...+.+... .+ +...+.+++. |
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~-Dl~~-~-~~~~~v~~~-~~--~~~~~~~~~a--D 71 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAV-DLSH-I-PTAVKIKGF-SG--EDATPALEGA--D 71 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHH-HHHT-S-CSSEEEEEE-CS--SCCHHHHTTC--S
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHH-HhhC-C-CCCceEEEe-cC--CCcHHHhCCC--C
Confidence 68999999999999999999876 5 5899999865 2221111 1111 1 112222211 01 1124566766 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
+||-+||.... .-.+..+.+..|..-...+.+.+.+......++.+|-
T Consensus 72 ivii~ag~~rk--pG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN 119 (312)
T 3hhp_A 72 VVLISAGVARK--PGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (312)
T ss_dssp EEEECCSCSCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred EEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 99999987431 2234578999999999999999988876656777664
No 365
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=97.58 E-value=0.00011 Score=69.64 Aligned_cols=79 Identities=22% Similarity=0.209 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh--ccC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN--VVA 154 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~--~~~ 154 (424)
..+++|||+||+|.||..+++.+...|++|++++++.++.+. .. ..+ +.. ...|..+.+..+.+.+ ..+
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~-~~~---g~~-~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRF----LV-EEL---GFD-GAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HH-HTT---CCS-EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HH-HHc---CCC-EEEECCCHHHHHHHHHhcCCC
Confidence 357899999999999999999999999999999985432111 10 111 221 1235655443333332 125
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+|+|.
T Consensus 219 ~d~vi~~~g~ 228 (336)
T 4b7c_A 219 IDVFFDNVGG 228 (336)
T ss_dssp EEEEEESSCH
T ss_pred ceEEEECCCc
Confidence 7999999974
No 366
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.56 E-value=7e-05 Score=65.99 Aligned_cols=73 Identities=15% Similarity=0.167 Sum_probs=48.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEEE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHVM 159 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~vi 159 (424)
|+|+|+||+|.+|+.+++.|++.|++|++++|+.+..+........ .... .|+. .+++.+++++. |+||
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~-------~~~~-~~~~~~~~~~~--D~Vi 69 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGD-------ASIT-GMKNEDAAEAC--DIAV 69 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSS-------CCEE-EEEHHHHHHHC--SEEE
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-cccc-------CCCC-hhhHHHHHhcC--CEEE
Confidence 5799999999999999999999999999999965433221111000 0000 1121 12345566766 9999
Q ss_pred Eccc
Q 042406 160 HLAA 163 (424)
Q Consensus 160 ~~Ag 163 (424)
++..
T Consensus 70 ~~~~ 73 (212)
T 1jay_A 70 LTIP 73 (212)
T ss_dssp ECSC
T ss_pred EeCC
Confidence 9874
No 367
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.56 E-value=0.00037 Score=65.85 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=75.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhh--hhc-cCCeEEEEccCCCHHHHHHHhhcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKG--LLE-RAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~~-~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
..|+|.|+|| |.+|..++..|+..|+ +|+++|++.+..+......... ... ..++... +| +++++++.
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d---~~ea~~~a 79 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE----YS---YEAALTGA 79 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE----CS---HHHHHTTC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe----CC---HHHHhCCC
Confidence 3478999998 9999999999999998 9999999876555422221111 111 1122211 23 34467777
Q ss_pred CccEEEEcccccCchhhcc----ChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 154 AFTHVMHLAAQAGVRYAMQ----NPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 154 ~~d~vi~~Ag~~~~~~~~~----~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
|+||-++|..... ... ........|..-...+.+.+.+......++.+|
T Consensus 80 --DiVi~a~g~p~~~-g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 132 (331)
T 1pzg_A 80 --DCVIVTAGLTKVP-GKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 132 (331)
T ss_dssp --SEEEECCSCSSCT-TCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred --CEEEEccCCCCCC-CcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 9999999863211 110 234567788888888888888876543444433
No 368
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=97.55 E-value=0.00015 Score=69.41 Aligned_cols=77 Identities=10% Similarity=0.039 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH---hhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI---FNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~---~~~~~ 154 (424)
.+++|+|+||+|.||..+++.+...|++|++++|+.++.+.. .... .. ..+|..+.+..+++ ..+.+
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~------~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~ 231 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA------EKLG---AA-AGFNYKKEDFSEATLKFTKGAG 231 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHHT---CS-EEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH------HHcC---Cc-EEEecCChHHHHHHHHHhcCCC
Confidence 578999999999999999999999999999999864332211 1111 11 22466654443333 33335
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+|+|.
T Consensus 232 ~d~vi~~~G~ 241 (354)
T 2j8z_A 232 VNLILDCIGG 241 (354)
T ss_dssp EEEEEESSCG
T ss_pred ceEEEECCCc
Confidence 7999999985
No 369
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.55 E-value=0.0001 Score=67.65 Aligned_cols=76 Identities=18% Similarity=0.170 Sum_probs=50.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+++|+++|+|+ |++|+.++..|++.|++|++++|+.++......... ....+. ..|+ +++.+ . +.
T Consensus 116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~----~~~~~~--~~~~---~~~~~--~--~~ 181 (271)
T 1nyt_A 116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFA----HTGSIQ--ALSM---DELEG--H--EF 181 (271)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTG----GGSSEE--ECCS---GGGTT--C--CC
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhh----ccCCee--EecH---HHhcc--C--CC
Confidence 357899999998 889999999999999999999996543322221111 111221 2333 22222 2 45
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+|||+++..
T Consensus 182 DivVn~t~~~ 191 (271)
T 1nyt_A 182 DLIINATSSG 191 (271)
T ss_dssp SEEEECCSCG
T ss_pred CEEEECCCCC
Confidence 9999999864
No 370
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.54 E-value=0.00031 Score=68.44 Aligned_cols=74 Identities=23% Similarity=0.296 Sum_probs=58.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d 156 (424)
.+++|+|+|. |-+|+.+++.|.+.|++|++++++.+.... ....++.++.+|.++.+.++++ +++. |
T Consensus 3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~---------~~~~g~~vi~GDat~~~~L~~agi~~A--~ 70 (413)
T 3l9w_A 3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIET---------LRKFGMKVFYGDATRMDLLESAGAAKA--E 70 (413)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHH---------HHHTTCCCEESCTTCHHHHHHTTTTTC--S
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH---------HHhCCCeEEEcCCCCHHHHHhcCCCcc--C
Confidence 3467999997 999999999999999999999996532211 1224678999999999998887 5555 9
Q ss_pred EEEEccc
Q 042406 157 HVMHLAA 163 (424)
Q Consensus 157 ~vi~~Ag 163 (424)
+||-+.+
T Consensus 71 ~viv~~~ 77 (413)
T 3l9w_A 71 VLINAID 77 (413)
T ss_dssp EEEECCS
T ss_pred EEEECCC
Confidence 9987653
No 371
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=97.54 E-value=0.0009 Score=62.58 Aligned_cols=115 Identities=15% Similarity=0.112 Sum_probs=71.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+|.|+|| |.+|..++..|+..|+ +|+++|++.+..+.......... .......+... +|. +.+++. |+
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~~a--D~ 73 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNY----ADTANS--DV 73 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGTTC--SE
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCH----HHHCCC--CE
Confidence 68999999 9999999999999997 89999998765543222111110 01112222210 222 346666 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
||.++|..... ..........|......+.+.+.+.... .+|.+.|
T Consensus 74 Vi~a~g~p~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~-a~vi~~t 119 (309)
T 1ur5_A 74 IVVTSGAPRKP--GMSREDLIKVNADITRACISQAAPLSPN-AVIIMVN 119 (309)
T ss_dssp EEECCCC----------CHHHHHHHHHHHHHHHHHGGGCTT-CEEEECC
T ss_pred EEEcCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCC-eEEEEcC
Confidence 99999863311 1122456788888889999999888755 4444444
No 372
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=97.54 E-value=2.5e-05 Score=71.71 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=28.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHh-CCCeEE-EEeCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKK-RGDGVL-GLDNF 112 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~-~g~~V~-~~~r~ 112 (424)
+.|+|+|+|++|.+|+.+++.+.+ .|++++ +++++
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~ 40 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALERE 40 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence 457899999999999999999885 477877 44553
No 373
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.53 E-value=0.00071 Score=62.55 Aligned_cols=116 Identities=13% Similarity=0.060 Sum_probs=78.1
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+|.|+|+ |+||..++..|+.++ .++.++|.+.+............. ........... .|++ .+++. |
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~----~~~~a--D 71 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLKGS--E 71 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGG----GGTTC--S
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHH----HhCCC--C
Confidence 78999996 999999999999887 479999986543322211111111 11122222222 1232 46666 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
+||-.||.... .-.+..+.+..|..-.+.+.+.+.++.....++.+|-
T Consensus 72 vVvitAG~prk--pGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 72 IIVVTAGLARK--PGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EEEECCCCCCC--SSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEEEecCCCCC--CCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 99999997432 2345678999999999999999999887756776665
No 374
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.52 E-value=0.00092 Score=62.49 Aligned_cols=115 Identities=17% Similarity=0.167 Sum_probs=77.9
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+|.|+|+ |.+|..++..|+..+ .+|+++|++.++.+...............+.+.. | +. +++++. |+
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~----~a~~~a--D~ 70 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SY----GDLEGA--RA 70 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----GGGTTE--EE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CH----HHhCCC--CE
Confidence 68999998 999999999999987 6899999975444332222211111113444443 2 33 347766 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
||..++..... -......+..|..-...+.+.+.+......++.+|-
T Consensus 71 Vii~ag~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 71 VVLAAGVAQRP--GETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp EEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEECCCCCCCC--CcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 99999874321 223456788899999999999988877667777654
No 375
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=97.52 E-value=9.5e-05 Score=70.38 Aligned_cols=78 Identities=21% Similarity=0.207 Sum_probs=51.6
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCH----HHHHHHhhc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDK----SLLDKIFNV 152 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~----~~v~~~~~~ 152 (424)
..+++|||+||+|.||..+++.+...|++|++++++.++.+. .+. .+ +.. ...|..+. +.+.+...
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~----~~~-~~---g~~-~~~d~~~~~~~~~~~~~~~~- 223 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL----LKT-KF---GFD-DAFNYKEESDLTAALKRCFP- 223 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHH-TS---CCS-EEEETTSCSCSHHHHHHHCT-
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----HHH-Hc---CCc-eEEecCCHHHHHHHHHHHhC-
Confidence 367899999999999999999999999999999985432111 110 11 221 12366543 23333322
Q ss_pred cCccEEEEcccc
Q 042406 153 VAFTHVMHLAAQ 164 (424)
Q Consensus 153 ~~~d~vi~~Ag~ 164 (424)
.++|+||+++|.
T Consensus 224 ~~~d~vi~~~g~ 235 (345)
T 2j3h_A 224 NGIDIYFENVGG 235 (345)
T ss_dssp TCEEEEEESSCH
T ss_pred CCCcEEEECCCH
Confidence 257999999973
No 376
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.51 E-value=0.00045 Score=64.51 Aligned_cols=82 Identities=15% Similarity=0.201 Sum_probs=57.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCc---hhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNY---YETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
...+++++|+|+ |++|+.++..|++.|. +|+++.|+.+. .+....... ...+..+...+..+.+.+.+.+.
T Consensus 145 ~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~----~~~~~~v~~~~~~~l~~~~~~l~ 219 (312)
T 3t4e_A 145 DMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVN----ENTDCVVTVTDLADQHAFTEALA 219 (312)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHH----HHSSCEEEEEETTCHHHHHHHHH
T ss_pred CcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhh----hccCcceEEechHhhhhhHhhcc
Confidence 467899999997 9999999999999998 89999997432 222111111 11233444456667555566677
Q ss_pred ccCccEEEEcccc
Q 042406 152 VVAFTHVMHLAAQ 164 (424)
Q Consensus 152 ~~~~d~vi~~Ag~ 164 (424)
+. |+|||+...
T Consensus 220 ~~--DiIINaTp~ 230 (312)
T 3t4e_A 220 SA--DILTNGTKV 230 (312)
T ss_dssp HC--SEEEECSST
T ss_pred Cc--eEEEECCcC
Confidence 66 999998765
No 377
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.49 E-value=0.00046 Score=62.43 Aligned_cols=111 Identities=17% Similarity=0.155 Sum_probs=70.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCC-------------------CchhhhHHHHHhhhhccCCeEEE
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFN-------------------NYYETSLKKARKGLLERAGVFVI 136 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~~~~~~~~~~~~v~~~ 136 (424)
+.+++|+|.|+ |++|..+++.|++.|. +|+++|++. .+.+....... .......+..+
T Consensus 29 l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~-~~np~~~v~~~ 106 (249)
T 1jw9_B 29 LKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALT-RINPHIAITPV 106 (249)
T ss_dssp HHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHH-HHCTTSEEEEE
T ss_pred HhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHH-HHCCCcEEEEE
Confidence 45678999997 8999999999999997 899999876 22222211111 11122345566
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
..++.+ +.+.+++++. |+||.+... ++ .-..+.++|++.+. .+|+.+..+.+|
T Consensus 107 ~~~~~~-~~~~~~~~~~--DvVi~~~d~---------~~--------~~~~l~~~~~~~~~--p~i~~~~~g~~g 159 (249)
T 1jw9_B 107 NALLDD-AELAALIAEH--DLVLDCTDN---------VA--------VRNQLNAGCFAAKV--PLVSGAAIRMEG 159 (249)
T ss_dssp CSCCCH-HHHHHHHHTS--SEEEECCSS---------HH--------HHHHHHHHHHHHTC--CEEEEEEEBTEE
T ss_pred eccCCH-hHHHHHHhCC--CEEEEeCCC---------HH--------HHHHHHHHHHHcCC--CEEEeeeccceE
Confidence 666653 5667778766 999988632 11 12345566777665 477765544433
No 378
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=97.48 E-value=0.00014 Score=69.51 Aligned_cols=74 Identities=19% Similarity=0.148 Sum_probs=50.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHH---HHHHhhccCc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSL---LDKIFNVVAF 155 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---v~~~~~~~~~ 155 (424)
++|+|+||+|+||..+++.+...|+ +|++++++.++.+. ... .+ +.. ..+|..+.+. +.+...+ ++
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~----~~~-~~---g~~-~~~d~~~~~~~~~~~~~~~~-~~ 231 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCIL----LTS-EL---GFD-AAINYKKDNVAEQLRESCPA-GV 231 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----HHH-TS---CCS-EEEETTTSCHHHHHHHHCTT-CE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHH----HHH-Hc---CCc-eEEecCchHHHHHHHHhcCC-CC
Confidence 7899999999999999999999999 99999985432111 111 11 111 2346665433 3333333 57
Q ss_pred cEEEEccc
Q 042406 156 THVMHLAA 163 (424)
Q Consensus 156 d~vi~~Ag 163 (424)
|+||+|+|
T Consensus 232 d~vi~~~G 239 (357)
T 2zb4_A 232 DVYFDNVG 239 (357)
T ss_dssp EEEEESCC
T ss_pred CEEEECCC
Confidence 99999998
No 379
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.47 E-value=0.00062 Score=63.52 Aligned_cols=114 Identities=20% Similarity=0.230 Sum_probs=67.5
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+|.|+|+ |.+|..++..|+..|+ +|+++|++.+..................+.+.. .+. +.+++. |+
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~a--Dv 70 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADA--QV 70 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTC--SE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCC--CE
Confidence 58999998 9999999999999998 999999975433221111111100011223322 232 346666 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
||.+++..... -....+.+..|......+++.+.+......+|.+|
T Consensus 71 VIi~~~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t 116 (304)
T 2v6b_A 71 VILTAGANQKP--GESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS 116 (304)
T ss_dssp EEECC--------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred EEEcCCCCCCC--CCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 99999763211 12234567788888888888888776543555544
No 380
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.46 E-value=0.0013 Score=61.79 Aligned_cols=117 Identities=13% Similarity=0.063 Sum_probs=77.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEE-EccCCCHHHHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVI-DADINDKSLLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~-~~Dl~d~~~v~~~~~~~~ 154 (424)
..++|.|+|+ |.+|..++..|+..|. +|+++|++.+...................... ..|+.+ +++.
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~-------~~da- 90 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV-------SAGS- 90 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS-------CSSC-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH-------hCCC-
Confidence 5688999999 9999999999999996 89999996554333222221111111112222 334322 5655
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||-+||....+ -.+..+.+..|..-...+.+.+.+......++.+|-
T Consensus 91 -DiVIitaG~p~kp--G~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 91 -KLVVITAGARQQE--GESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp -SEEEECCSCCCCS--SCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred -CEEEEeCCCCCCC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 9999999974321 233456788898888999999888876656776664
No 381
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.45 E-value=0.0026 Score=60.15 Aligned_cols=175 Identities=16% Similarity=0.101 Sum_probs=101.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-------eEEEEeCCCCchh-hhHHHHHhhhhccCCe-EEEEccCCCHHHH
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-------GVLGLDNFNNYYE-TSLKKARKGLLERAGV-FVIDADINDKSLL 146 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~-~~~~~~~~~~~~~~~v-~~~~~Dl~d~~~v 146 (424)
+++.-+|.|+||+|.||+.|+..|+.... ++.++|....... +..... ......+.. ..+..+ | .
T Consensus 21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~D-L~~~~~~~~~~~~~~~--~---~ 94 (345)
T 4h7p_A 21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAE-LEDCAFPLLDKVVVTA--D---P 94 (345)
T ss_dssp -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH-HHHTTCTTEEEEEEES--C---H
T ss_pred CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhh-hhhcCccCCCcEEEcC--C---h
Confidence 44556899999999999999998887642 6888887432110 000111 111111221 222211 2 3
Q ss_pred HHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcC-CCCeEEEecCC---ccc--CCCCCCCCCC
Q 042406 147 DKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSD-PQPAIVWASSS---SVY--GVNKKVPFSE 220 (424)
Q Consensus 147 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~-~~~~~v~~SS~---~vy--g~~~~~~~~e 220 (424)
.+++++. |+||-+||...- .-...++.++.|..-.+.+.+...+.. ...+++.+|-. .+| -....
T Consensus 95 ~~a~~~a--dvVvi~aG~prk--pGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i~~~~~~----- 165 (345)
T 4h7p_A 95 RVAFDGV--AIAIMCGAFPRK--AGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALILLKSAQ----- 165 (345)
T ss_dssp HHHTTTC--SEEEECCCCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHHTT-----
T ss_pred HHHhCCC--CEEEECCCCCCC--CCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHHHHHHcc-----
Confidence 5678877 999999997432 234557899999999999999987754 33245566642 111 00000
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 221 KDRTDQPASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
. ..++...-+.+-+..-++-..+++..|+....|+-..|.|..+.
T Consensus 166 -g-~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~ 210 (345)
T 4h7p_A 166 -G-KLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSS 210 (345)
T ss_dssp -T-CSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSST
T ss_pred -C-CCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCC
Confidence 0 00222233344455555566666777887777776677787554
No 382
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.44 E-value=7.8e-05 Score=69.12 Aligned_cols=81 Identities=10% Similarity=0.086 Sum_probs=51.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+++|+++|||++ ++|+.++..|++.| +|++++|+.++.+......... ..... .+.+|+.+. .+.+. +.
T Consensus 125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~--~~~~~-~~~~d~~~~---~~~~~--~~ 194 (287)
T 1nvt_A 125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK--LNKKF-GEEVKFSGL---DVDLD--GV 194 (287)
T ss_dssp CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH--HTCCH-HHHEEEECT---TCCCT--TC
T ss_pred CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhh--ccccc-ceeEEEeeH---HHhhC--CC
Confidence 4578999999985 99999999999999 9999999654433322221110 00000 112333331 22333 45
Q ss_pred cEEEEcccccC
Q 042406 156 THVMHLAAQAG 166 (424)
Q Consensus 156 d~vi~~Ag~~~ 166 (424)
|+||||++...
T Consensus 195 DilVn~ag~~~ 205 (287)
T 1nvt_A 195 DIIINATPIGM 205 (287)
T ss_dssp CEEEECSCTTC
T ss_pred CEEEECCCCCC
Confidence 99999998743
No 383
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=97.40 E-value=0.0005 Score=65.34 Aligned_cols=78 Identities=22% Similarity=0.188 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-HHHHHHHhhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-KSLLDKIFNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~v~~~~~~~~~d 156 (424)
.|++|||+||+|.||..+++.+...|++|++++++.++.+.... +. .-.++..+ .+ .+.+.+...+.++|
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~------~g--a~~v~~~~-~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS------VG--ADIVLPLE-EGWAKAVREATGGAGVD 229 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------HT--CSEEEESS-TTHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh------cC--CcEEecCc-hhHHHHHHHHhCCCCce
Confidence 57889999999999999999999999999999986654322111 11 11233333 22 23344444444679
Q ss_pred EEEEcccc
Q 042406 157 HVMHLAAQ 164 (424)
Q Consensus 157 ~vi~~Ag~ 164 (424)
+||+++|.
T Consensus 230 vvid~~g~ 237 (342)
T 4eye_A 230 MVVDPIGG 237 (342)
T ss_dssp EEEESCC-
T ss_pred EEEECCch
Confidence 99999985
No 384
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.38 E-value=0.00043 Score=63.82 Aligned_cols=80 Identities=18% Similarity=0.151 Sum_probs=55.1
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..++++++|+|+ |++|+.++..|++.|. +|++++|+.++.+......... ...+.+...+. +++.+.+.+.
T Consensus 124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~---~~~~~i~~~~~---~~l~~~l~~~- 195 (283)
T 3jyo_A 124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA---VGREAVVGVDA---RGIEDVIAAA- 195 (283)
T ss_dssp TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH---HTSCCEEEECS---TTHHHHHHHS-
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhh---cCCceEEEcCH---HHHHHHHhcC-
Confidence 467899999998 8999999999999998 7999999765544333322211 11233333343 3455666666
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
|+|||+...
T Consensus 196 -DiVInaTp~ 204 (283)
T 3jyo_A 196 -DGVVNATPM 204 (283)
T ss_dssp -SEEEECSST
T ss_pred -CEEEECCCC
Confidence 999998764
No 385
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=97.36 E-value=0.00047 Score=65.21 Aligned_cols=77 Identities=18% Similarity=0.201 Sum_probs=52.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---HHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS---LLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~v~~~~~~~~ 154 (424)
.+++|+|+||+|.||..+++.+...|++|++++++.++.+. . ..+. .-.+ .|..+.+ .+.+...+.+
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~--~~~g--a~~~--~~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKI----A--KEYG--AEYL--INASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHH----H--HHTT--CSEE--EETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----H--HHcC--CcEE--EeCCCchHHHHHHHHhCCCC
Confidence 57889999999999999999999999999999985432221 1 1111 1122 3444433 3444444446
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+++|.
T Consensus 218 ~D~vid~~g~ 227 (334)
T 3qwb_A 218 VDASFDSVGK 227 (334)
T ss_dssp EEEEEECCGG
T ss_pred ceEEEECCCh
Confidence 8999999984
No 386
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=97.35 E-value=0.00045 Score=65.53 Aligned_cols=77 Identities=14% Similarity=0.151 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---HHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS---LLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~v~~~~~~~~ 154 (424)
.|++|+|+||+|.||..+++.+...|++|++++++.++.+.... +.. -.+ .|..+.+ .+.+...+.+
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~------lga--~~~--~~~~~~~~~~~~~~~~~~~g 213 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR------LGA--AYV--IDTSTAPLYETVMELTNGIG 213 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH------HTC--SEE--EETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh------CCC--cEE--EeCCcccHHHHHHHHhCCCC
Confidence 57899999999999999999999999999999997764433211 111 122 2454433 3444444446
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+|+|.
T Consensus 214 ~Dvvid~~g~ 223 (340)
T 3gms_A 214 ADAAIDSIGG 223 (340)
T ss_dssp EEEEEESSCH
T ss_pred CcEEEECCCC
Confidence 7999999984
No 387
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=97.29 E-value=0.00045 Score=65.78 Aligned_cols=77 Identities=22% Similarity=0.298 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHH---HHHHhhcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSL---LDKIFNVV 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~---v~~~~~~~ 153 (424)
.+++|+|+||+|.||..+++.+... |++|++++++.++.+.. + ... .. .+ .|..+.+. +.+....-
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~----~--~~g-~~-~~--~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA----K--RAG-AD-YV--INASMQDPLAEIRRITESK 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH----H--HHT-CS-EE--EETTTSCHHHHHHHHTTTS
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----H--HhC-CC-EE--ecCCCccHHHHHHHHhcCC
Confidence 5789999999999999999999999 99999999864332211 1 111 11 12 35555443 44444312
Q ss_pred CccEEEEcccc
Q 042406 154 AFTHVMHLAAQ 164 (424)
Q Consensus 154 ~~d~vi~~Ag~ 164 (424)
++|+||+++|.
T Consensus 240 ~~d~vi~~~g~ 250 (347)
T 1jvb_A 240 GVDAVIDLNNS 250 (347)
T ss_dssp CEEEEEESCCC
T ss_pred CceEEEECCCC
Confidence 57999999984
No 388
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.28 E-value=0.0028 Score=60.37 Aligned_cols=176 Identities=11% Similarity=0.050 Sum_probs=100.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-----eEEEEeCCCCchhhhHHHHHhhhhcc--CCeEEEEccCCCHHHHHHHh
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-----GVLGLDNFNNYYETSLKKARKGLLER--AGVFVIDADINDKSLLDKIF 150 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~~~~~~~~~~~~--~~v~~~~~Dl~d~~~v~~~~ 150 (424)
+.++|.|+||+|.||.+++-.|+..+. .|.+.+.+.+...........+.... +-..-+. +.+ .-.+.+
T Consensus 31 ~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~--~~y~~~ 106 (375)
T 7mdh_A 31 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGI--DPYEVF 106 (375)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EES--CHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--Eec--CCHHHh
Confidence 457899999999999999999999863 27666554433222222222221111 1111121 111 235677
Q ss_pred hccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCC---cccCCCCCCCCCCCCCCCC
Q 042406 151 NVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS-DPQPAIVWASSS---SVYGVNKKVPFSEKDRTDQ 226 (424)
Q Consensus 151 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~---~vyg~~~~~~~~e~~~~~~ 226 (424)
++. |+||-.||... ..-....+.+..|..-...+.+++.+. .....++.+|.. ..|-.. .. ....+
T Consensus 107 ~da--DvVVitag~pr--kpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia~-----k~-sg~~~ 176 (375)
T 7mdh_A 107 EDV--DWALLIGAKPR--GPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALICL-----KN-APDIP 176 (375)
T ss_dssp TTC--SEEEECCCCCC--CTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHH-----HT-CTTSC
T ss_pred CCC--CEEEEcCCCCC--CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHHH-----HH-cCCCC
Confidence 777 99999998632 122345789999999999999988875 555477777651 011000 00 00001
Q ss_pred CCChHHHHHHHHHHHHHHHHHHhCCcEEEEEeccccCCCCC
Q 042406 227 PASLYAATKKAGEAIAHAYNHIYGLSITGLRFFTVYGPWGR 267 (424)
Q Consensus 227 ~~~~Y~~sK~~~e~~~~~~~~~~~i~~~~vrp~~v~G~~~~ 267 (424)
+...-+.+-+..-++-..+++..|+....|+-.+|+|..+.
T Consensus 177 ~rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHgd 217 (375)
T 7mdh_A 177 AKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST 217 (375)
T ss_dssp GGGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST
T ss_pred ccEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCCC
Confidence 11112234444455555666777876666664468887553
No 389
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.27 E-value=0.002 Score=60.46 Aligned_cols=116 Identities=23% Similarity=0.215 Sum_probs=73.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..++|.|+|+ |.+|..++..|+..|. +|+++|++.+............. .....+.+.. .+. +.+++.
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~---~~~----~al~~a- 75 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH---GDY----DDCRDA- 75 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE---CCG----GGTTTC-
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc---CcH----HHhCCC-
Confidence 4578999999 9999999999998874 89999997543222111111111 1111344442 222 346666
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
|+||.+++..... .+ .....+..|..-...+++.+.+......++.+|
T Consensus 76 -DvViia~~~~~~~-g~-~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t 123 (316)
T 1ldn_A 76 -DLVVICAGANQKP-GE-TRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (316)
T ss_dssp -SEEEECCSCCCCT-TT-CSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred -CEEEEcCCCCCCC-CC-CHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence 9999999874422 11 224557778888888888888876554555554
No 390
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.26 E-value=0.00055 Score=64.47 Aligned_cols=77 Identities=19% Similarity=0.116 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---HHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS---LLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~v~~~~~~~~ 154 (424)
.+++|+|+||+|.||..+++.+...|++|++++++.++.+.. + .+. .-.+ .|..+.+ .+.+...+.+
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~--~~G--a~~~--~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA----K--ALG--AWET--IDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----H--HHT--CSEE--EETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----H--HcC--CCEE--EeCCCccHHHHHHHHhCCCC
Confidence 578899999999999999999999999999999854432211 1 111 1122 3454433 3444444446
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+++|.
T Consensus 210 ~Dvvid~~g~ 219 (325)
T 3jyn_A 210 CPVVYDGVGQ 219 (325)
T ss_dssp EEEEEESSCG
T ss_pred ceEEEECCCh
Confidence 7999999985
No 391
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=97.22 E-value=0.00083 Score=64.07 Aligned_cols=76 Identities=12% Similarity=0.134 Sum_probs=52.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---HHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS---LLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~v~~~~~~~~ 154 (424)
.+++|+|+||+|.||..+++.+...|++|++++++.++.+.. + .+. .-.+ .|..+.+ .+.+.. ..+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~--~lG--a~~~--~~~~~~~~~~~~~~~~-~~g 235 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC----E--RLG--AKRG--INYRSEDFAAVIKAET-GQG 235 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----H--HHT--CSEE--EETTTSCHHHHHHHHH-SSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----H--hcC--CCEE--EeCCchHHHHHHHHHh-CCC
Confidence 578899999999999999999999999999999865432211 1 111 1122 3444433 333333 336
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+|+|.
T Consensus 236 ~Dvvid~~g~ 245 (353)
T 4dup_A 236 VDIILDMIGA 245 (353)
T ss_dssp EEEEEESCCG
T ss_pred ceEEEECCCH
Confidence 7999999984
No 392
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=97.22 E-value=0.0016 Score=61.87 Aligned_cols=76 Identities=8% Similarity=-0.031 Sum_probs=51.8
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---HHHHHhhccCc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS---LLDKIFNVVAF 155 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~v~~~~~~~~~ 155 (424)
+++|+|+||+|.||..+++.+...|++|++++++.++.+... .++ .-.+ .|..+.+ .+.+...+.++
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~------~~G--a~~~--~~~~~~~~~~~v~~~~~~~g~ 234 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK------DIG--AAHV--LNEKAPDFEATLREVMKAEQP 234 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH------HHT--CSEE--EETTSTTHHHHHHHHHHHHCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH------HcC--CCEE--EECCcHHHHHHHHHHhcCCCC
Confidence 378999999999999999999999999999998665432221 111 1122 2444433 34444443467
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||+++|.
T Consensus 235 D~vid~~g~ 243 (349)
T 3pi7_A 235 RIFLDAVTG 243 (349)
T ss_dssp CEEEESSCH
T ss_pred cEEEECCCC
Confidence 999999974
No 393
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.20 E-value=0.0035 Score=58.84 Aligned_cols=118 Identities=13% Similarity=0.123 Sum_probs=73.2
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
.|+|.|+|| |.+|..++..|+..|+ +|+++|++.+..+.......... .......+... +|. +++++. |
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t--~d~----~al~~a--D 74 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS--NTY----DDLAGA--D 74 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE--CCG----GGGTTC--S
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC--CCH----HHhCCC--C
Confidence 468999998 9999999999999998 89999998765543222221110 01112222210 222 346666 9
Q ss_pred EEEEcccccCchhhcc----ChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 157 HVMHLAAQAGVRYAMQ----NPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~----~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
+||.++|.... .... ........|..-...+.+.+.+......+|.+|-
T Consensus 75 ~Vi~a~g~p~k-~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 127 (322)
T 1t2d_A 75 VVIVTAGFTKA-PGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN 127 (322)
T ss_dssp EEEECCSCSSC-TTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred EEEEeCCCCCC-CCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 99999986321 1111 0245577787778888888877765435555543
No 394
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=97.20 E-value=0.0015 Score=64.45 Aligned_cols=37 Identities=27% Similarity=0.264 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
..|++|+|+||+|.||..+++.+...|++|++++++.
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~ 255 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA 255 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH
Confidence 3678999999999999999999999999999998744
No 395
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.20 E-value=0.00015 Score=59.70 Aligned_cols=71 Identities=13% Similarity=0.098 Sum_probs=48.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+++|+|.|+ |.+|+.+++.|.+.|++|++++|+.++...... .. ++... +.. ++.+++++. |+|
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~-----~~---~~~~~--~~~---~~~~~~~~~--Div 84 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAE-----KY---EYEYV--LIN---DIDSLIKNN--DVI 84 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHH-----HH---TCEEE--ECS---CHHHHHHTC--SEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHH-----Hh---CCceE--eec---CHHHHhcCC--CEE
Confidence 789999997 999999999999999999999996543222111 11 12221 222 345566666 999
Q ss_pred EEccccc
Q 042406 159 MHLAAQA 165 (424)
Q Consensus 159 i~~Ag~~ 165 (424)
|.+.+..
T Consensus 85 i~at~~~ 91 (144)
T 3oj0_A 85 ITATSSK 91 (144)
T ss_dssp EECSCCS
T ss_pred EEeCCCC
Confidence 9988753
No 396
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=97.19 E-value=0.00075 Score=64.74 Aligned_cols=75 Identities=15% Similarity=0.091 Sum_probs=54.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.+.+|+|+|+ |.||..+++.+...|++|++++++.++.+.. .. .+ +.. ...|..+.+.+.++.. ++|+
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~----~~-~l---Ga~-~v~~~~~~~~~~~~~~--~~D~ 254 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEA----LK-NF---GAD-SFLVSRDQEQMQAAAG--TLDG 254 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHH----HH-TS---CCS-EEEETTCHHHHHHTTT--CEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HH-hc---CCc-eEEeccCHHHHHHhhC--CCCE
Confidence 6789999996 9999999999999999999999865432211 10 11 121 1246777777776665 4699
Q ss_pred EEEcccc
Q 042406 158 VMHLAAQ 164 (424)
Q Consensus 158 vi~~Ag~ 164 (424)
||+++|.
T Consensus 255 vid~~g~ 261 (366)
T 1yqd_A 255 IIDTVSA 261 (366)
T ss_dssp EEECCSS
T ss_pred EEECCCc
Confidence 9999985
No 397
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.17 E-value=0.00036 Score=66.88 Aligned_cols=77 Identities=12% Similarity=0.033 Sum_probs=54.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
..+++|+|+|+ |.+|+.+++.|...|++|++++|+.++.+..... ....+.. +..+.+.+.+.+.+. |
T Consensus 165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~------~~~~~~~---~~~~~~~~~~~~~~~--D 232 (361)
T 1pjc_A 165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETL------FGSRVEL---LYSNSAEIETAVAEA--D 232 (361)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------HGGGSEE---EECCHHHHHHHHHTC--S
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHh------hCceeEe---eeCCHHHHHHHHcCC--C
Confidence 45689999999 9999999999999999999999965433222111 1112222 223456677777765 9
Q ss_pred EEEEccccc
Q 042406 157 HVMHLAAQA 165 (424)
Q Consensus 157 ~vi~~Ag~~ 165 (424)
+||++++..
T Consensus 233 vVI~~~~~~ 241 (361)
T 1pjc_A 233 LLIGAVLVP 241 (361)
T ss_dssp EEEECCCCT
T ss_pred EEEECCCcC
Confidence 999999863
No 398
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=97.17 E-value=0.00068 Score=64.27 Aligned_cols=74 Identities=19% Similarity=0.154 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---HHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS---LLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~v~~~~~~~~ 154 (424)
.+++|+|+|| |.||..+++.+...|++|++++++.++.+. .+ .+ +... ..|..+.+ .+.+... +
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~----~~--~l---Ga~~-~~d~~~~~~~~~~~~~~~--~ 230 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLEL----AK--EL---GADL-VVNPLKEDAAKFMKEKVG--G 230 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHH----HH--HT---TCSE-EECTTTSCHHHHHHHHHS--S
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHH----HH--HC---CCCE-EecCCCccHHHHHHHHhC--C
Confidence 5789999999 779999999999999999999985432221 11 11 2221 24665432 3333332 5
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+++|.
T Consensus 231 ~d~vid~~g~ 240 (339)
T 1rjw_A 231 VHAAVVTAVS 240 (339)
T ss_dssp EEEEEESSCC
T ss_pred CCEEEECCCC
Confidence 6999999974
No 399
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=97.16 E-value=0.0032 Score=57.97 Aligned_cols=110 Identities=14% Similarity=0.143 Sum_probs=70.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCC------------------CchhhhHHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFN------------------NYYETSLKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~------------------~~~~~~~~~~~~~~~~~~~v~~~ 136 (424)
.+...+|+|.|+ |++|..+++.|+..|. +++++|.+. .+.+.... .....+..-.++.+
T Consensus 33 kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~-~L~~iNP~v~v~~~ 110 (292)
T 3h8v_A 33 KIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEH-TLRNINPDVLFEVH 110 (292)
T ss_dssp GGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHH-HHHHHCTTSEEEEE
T ss_pred HHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHH-HHHhhCCCcEEEEe
Confidence 456778999997 9999999999999995 788888765 11111111 11122334467777
Q ss_pred EccCCCHHHHHHHhhc---------cCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 137 DADINDKSLLDKIFNV---------VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~---------~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
..++++.+.+.++++. .++|+||++... ...-..+-++|.+.+. -+|+.+.
T Consensus 111 ~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn-----------------~~~R~~in~~c~~~~~--Pli~~gv 170 (292)
T 3h8v_A 111 NYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDN-----------------FEARMTINTACNELGQ--TWMESGV 170 (292)
T ss_dssp CCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSS-----------------HHHHHHHHHHHHHHTC--CEEEEEE
T ss_pred cccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcc-----------------hhhhhHHHHHHHHhCC--CEEEeee
Confidence 7888877777776631 256999987532 1112345567777775 3666543
No 400
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.16 E-value=0.0013 Score=61.00 Aligned_cols=77 Identities=10% Similarity=0.041 Sum_probs=53.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
.+.+|+++|+|+ |++|+.++..|++.|. +|++++|+.++.+..... ... ... ++.+.+.+.+.+.+.
T Consensus 138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~-----~~~-~~~----~~~~~~~~~~~~~~a- 205 (297)
T 2egg_A 138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVRE-----GDE-RRS----AYFSLAEAETRLAEY- 205 (297)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHH-----SCS-SSC----CEECHHHHHHTGGGC-
T ss_pred CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH-----hhh-ccC----ceeeHHHHHhhhccC-
Confidence 457899999998 8899999999999997 999999965432221111 111 000 122335666777766
Q ss_pred ccEEEEccccc
Q 042406 155 FTHVMHLAAQA 165 (424)
Q Consensus 155 ~d~vi~~Ag~~ 165 (424)
|+|||+.+..
T Consensus 206 -DivIn~t~~~ 215 (297)
T 2egg_A 206 -DIIINTTSVG 215 (297)
T ss_dssp -SEEEECSCTT
T ss_pred -CEEEECCCCC
Confidence 9999998764
No 401
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=97.15 E-value=0.0011 Score=61.41 Aligned_cols=92 Identities=20% Similarity=0.161 Sum_probs=58.5
Q ss_pred CCCCe-EEEEcCC------------------ChhHHHHHHHHHhCCCeEEEEeCCCCchhhhH---HH--HH---hhhhc
Q 042406 77 TRGLT-VLVTGAA------------------GFVGSHVSLALKKRGDGVLGLDNFNNYYETSL---KK--AR---KGLLE 129 (424)
Q Consensus 77 ~~~~~-vlItGg~------------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~--~~---~~~~~ 129 (424)
+.|++ ||||+|. |-.|.++|+.++++|+.|+++.+..+-....+ .. .. .....
T Consensus 34 l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~~ 113 (313)
T 1p9o_A 34 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGPA 113 (313)
T ss_dssp HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC-
T ss_pred hcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhcccccc
Confidence 46777 8998664 66999999999999999999998543111000 00 00 00001
Q ss_pred cCCeEEEEccCCCHHHHHHHhhc-----------------------------------cCccEEEEcccccCch
Q 042406 130 RAGVFVIDADINDKSLLDKIFNV-----------------------------------VAFTHVMHLAAQAGVR 168 (424)
Q Consensus 130 ~~~v~~~~~Dl~d~~~v~~~~~~-----------------------------------~~~d~vi~~Ag~~~~~ 168 (424)
..++..+.+|+...+.+.+++.. .+.|++|++|++.+..
T Consensus 114 ~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~ 187 (313)
T 1p9o_A 114 LSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFY 187 (313)
T ss_dssp CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEE
T ss_pred ccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhcc
Confidence 24566777787776655554421 1359999999997654
No 402
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.15 E-value=0.0038 Score=58.53 Aligned_cols=115 Identities=14% Similarity=0.102 Sum_probs=72.3
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
|+|.|+|+ |.+|..++..|++.|+ +|+++|++.+..+.................+.. +|.+ .+++. |+
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~d~~----~~~~a--Dv 70 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA---GDYA----DLKGS--DV 70 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE---CCGG----GGTTC--SE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe---CCHH----HhCCC--CE
Confidence 57999998 9999999999999998 999999975433322111111100011222222 2332 35655 99
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
||-+++..... .....+....|......+++.+.+......+|.+|.
T Consensus 71 Viiav~~~~~~--g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tN 117 (319)
T 1a5z_A 71 VIVAAGVPQKP--GETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTN 117 (319)
T ss_dssp EEECCCCCCCS--SCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEEccCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 99998763311 122356777888888888888877654435555543
No 403
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.14 E-value=0.00051 Score=68.00 Aligned_cols=73 Identities=12% Similarity=0.263 Sum_probs=57.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d 156 (424)
+.|+|+|.|+ |-+|++|++.|.++|++|++++++.+.... .. ..-++.++.+|-++++.++++ +++. |
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~----~~----~~~~~~~i~Gd~~~~~~L~~Agi~~a--d 70 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRE----LQ----DKYDLRVVNGHASHPDVLHEAGAQDA--D 70 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHH----HH----HHSSCEEEESCTTCHHHHHHHTTTTC--S
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHH----HH----HhcCcEEEEEcCCCHHHHHhcCCCcC--C
Confidence 4689999998 999999999999999999999986432211 11 123688999999999999887 4444 9
Q ss_pred EEEEc
Q 042406 157 HVMHL 161 (424)
Q Consensus 157 ~vi~~ 161 (424)
++|-+
T Consensus 71 ~~ia~ 75 (461)
T 4g65_A 71 MLVAV 75 (461)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 88854
No 404
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.14 E-value=0.0016 Score=60.83 Aligned_cols=116 Identities=16% Similarity=0.126 Sum_probs=73.7
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC--CCeEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+|.|+|+ |.+|..++..|++. |++|+++|++.+..+.......... .......+.. .+|.+ + +++. |
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~--t~d~~---~-l~~a--D 71 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG--SNDYA---D-TANS--D 71 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE--ESCGG---G-GTTC--S
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE--CCCHH---H-HCCC--C
Confidence 58999998 99999999999985 7999999998765443211111110 0011212211 12332 2 5555 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
+||-+++.... ........+..|..-...+++.+.+......+|.+|.
T Consensus 72 vViiav~~p~~--~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN 119 (310)
T 1guz_A 72 IVIITAGLPRK--PGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN 119 (310)
T ss_dssp EEEECCSCCCC--TTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred EEEEeCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 99999975321 1122456788899988899998888765546666643
No 405
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=97.10 E-value=0.00097 Score=64.19 Aligned_cols=77 Identities=16% Similarity=0.095 Sum_probs=55.7
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
...+++|+|+|+ |.||..+++.+...|++|++.+|+.++.+.. . +.. ...+ ..+..+.+.+.+.+.+.
T Consensus 165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~----~-~~~-g~~~---~~~~~~~~~l~~~l~~a-- 232 (377)
T 2vhw_A 165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQL----D-AEF-CGRI---HTRYSSAYELEGAVKRA-- 232 (377)
T ss_dssp TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----H-HHT-TTSS---EEEECCHHHHHHHHHHC--
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH----H-Hhc-CCee---EeccCCHHHHHHHHcCC--
Confidence 467899999998 9999999999999999999999964322111 1 101 1111 23445667788888877
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||++++.
T Consensus 233 DvVi~~~~~ 241 (377)
T 2vhw_A 233 DLVIGAVLV 241 (377)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999998875
No 406
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.09 E-value=0.001 Score=62.90 Aligned_cols=70 Identities=16% Similarity=0.051 Sum_probs=56.4
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHH-hhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKI-FNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~-~~~~~~d~ 157 (424)
.++++|.|+ |.+|+.+++.|.++|+ |++++++.+..+ ....++.++.+|.+|++.++++ +++. |.
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~----------~~~~~~~~i~gd~~~~~~L~~a~i~~a--~~ 180 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK----------VLRSGANFVHGDPTRVSDLEKANVRGA--RA 180 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH----------HHHTTCEEEESCTTSHHHHHHTCSTTE--EE
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh----------HHhCCcEEEEeCCCCHHHHHhcChhhc--cE
Confidence 568999997 9999999999999999 999988554221 1125789999999999999887 6655 98
Q ss_pred EEEcc
Q 042406 158 VMHLA 162 (424)
Q Consensus 158 vi~~A 162 (424)
|+-+.
T Consensus 181 vi~~~ 185 (336)
T 1lnq_A 181 VIVDL 185 (336)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 88765
No 407
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.07 E-value=0.0053 Score=57.78 Aligned_cols=114 Identities=16% Similarity=0.175 Sum_probs=72.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhh--hh-ccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKG--LL-ERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~-~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
|+|.|+|| |.+|..++..|+..|+ +|+++|++.+..+......... .. ...++... .| . +++++.
T Consensus 15 ~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t-~d---~----~al~~a-- 83 (328)
T 2hjr_A 15 KKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE-NN---Y----EYLQNS-- 83 (328)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE-SC---G----GGGTTC--
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC-CC---H----HHHCCC--
Confidence 68999998 9999999999999998 9999999876555322111111 11 11223221 23 2 346666
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||-++|... .... ...+....|..-...+++.+.+......++.+|-
T Consensus 84 D~VI~avg~p~-k~g~-tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 84 DVVIITAGVPR-KPNM-TRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp SEEEECCSCCC-CTTC-CSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CEEEEcCCCCC-CCCC-chhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 99999998632 1111 1234567788778888888777655435555543
No 408
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=97.07 E-value=0.0014 Score=62.74 Aligned_cols=100 Identities=20% Similarity=0.130 Sum_probs=62.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---HHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS---LLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~v~~~~~~~~ 154 (424)
.+++|+|+||+|.||..+++.+...|++|++++++.++.+. .+ + +. .-.++ |..+.+ .+.+.. ..+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~----~~-~-~G--a~~~~--~~~~~~~~~~~~~~~-~~g 231 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAF----LK-S-LG--CDRPI--NYKTEPVGTVLKQEY-PEG 231 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHH----HH-H-TT--CSEEE--ETTTSCHHHHHHHHC-TTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHH----HH-H-cC--CcEEE--ecCChhHHHHHHHhc-CCC
Confidence 57899999999999999999999999999999985432211 11 1 11 11222 444322 222222 225
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcc
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSV 209 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~v 209 (424)
+|+||+++|.. .....++.++..| ++|.+++...
T Consensus 232 ~D~vid~~g~~------------------~~~~~~~~l~~~G---~iv~~g~~~~ 265 (362)
T 2c0c_A 232 VDVVYESVGGA------------------MFDLAVDALATKG---RLIVIGFISG 265 (362)
T ss_dssp EEEEEECSCTH------------------HHHHHHHHEEEEE---EEEECCCGGG
T ss_pred CCEEEECCCHH------------------HHHHHHHHHhcCC---EEEEEeCCCC
Confidence 79999998730 1233455555543 7888887543
No 409
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.06 E-value=0.0069 Score=56.68 Aligned_cols=116 Identities=18% Similarity=0.159 Sum_probs=70.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
..|+|.|.|+ |.+|..++..|++.|+ +|++++|+.+..+.................+... .+.+ .+++.
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~----~~~~a-- 76 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----ICRDA-- 76 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----GGTTC--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHH----HhCCC--
Confidence 3478999998 9999999999999998 9999999653332111111111101112222221 1322 34545
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEe
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWA 204 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~ 204 (424)
|+||-+++..... ..+....+..|......+++.+.+......+|.+
T Consensus 77 D~Vii~v~~~~~~--g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~ 123 (319)
T 1lld_A 77 DMVVITAGPRQKP--GQSRLELVGATVNILKAIMPNLVKVAPNAIYMLI 123 (319)
T ss_dssp SEEEECCCCCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred CEEEECCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEe
Confidence 9999998753321 2334567788888888888887776544244433
No 410
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=97.04 E-value=0.0053 Score=55.45 Aligned_cols=111 Identities=16% Similarity=0.161 Sum_probs=68.0
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCc-------------------hhhhHHHHHhhhhccCCeEEE
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNY-------------------YETSLKKARKGLLERAGVFVI 136 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~-------------------~~~~~~~~~~~~~~~~~v~~~ 136 (424)
+.+++|+|.|+ |++|.++++.|+..|. +++++|++.-. .+..... -......-.++.+
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~-l~~~np~~~v~~~ 103 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQR-LTQLNPDIQLTAL 103 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHH-HHHHCTTSEEEEE
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHH-HHHHCCCCEEEEE
Confidence 45678999998 7899999999999996 78888765311 1111111 1111122334555
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYG 211 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg 211 (424)
..+++ .+.+.+++++. |+||++... . ..-..+.++|.+.+. .+|..+..+.+|
T Consensus 104 ~~~~~-~~~~~~~~~~~--DvVi~~~d~---------~--------~~r~~l~~~~~~~~~--p~i~~~~~g~~G 156 (251)
T 1zud_1 104 QQRLT-GEALKDAVARA--DVVLDCTDN---------M--------ATRQEINAACVALNT--PLITASAVGFGG 156 (251)
T ss_dssp CSCCC-HHHHHHHHHHC--SEEEECCSS---------H--------HHHHHHHHHHHHTTC--CEEEEEEEBTEE
T ss_pred eccCC-HHHHHHHHhcC--CEEEECCCC---------H--------HHHHHHHHHHHHhCC--CEEEEeccccce
Confidence 54554 45677888876 999987531 1 112345566777664 477776655544
No 411
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=97.03 E-value=0.0012 Score=62.74 Aligned_cols=76 Identities=24% Similarity=0.224 Sum_probs=49.6
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-HHHHHHHhhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-KSLLDKIFNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~v~~~~~~~~~d 156 (424)
.+++|||+||+|.||..+++.+...|++|+++ ++.++. ...+ .+ +...+. +-.+ .+.+.+...+.++|
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~----~~~~--~l---Ga~~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL----EYVR--DL---GATPID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH----HHHH--HH---TSEEEE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH----HHHH--Hc---CCCEec-cCCCHHHHHHHHhcCCCce
Confidence 57889999999999999999999999999988 433211 1111 11 233332 2222 23344444444689
Q ss_pred EEEEcccc
Q 042406 157 HVMHLAAQ 164 (424)
Q Consensus 157 ~vi~~Ag~ 164 (424)
+||+++|.
T Consensus 219 ~vid~~g~ 226 (343)
T 3gaz_A 219 LVYDTLGG 226 (343)
T ss_dssp EEEESSCT
T ss_pred EEEECCCc
Confidence 99999973
No 412
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.02 E-value=0.0012 Score=62.90 Aligned_cols=76 Identities=20% Similarity=0.186 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH---HHHHHhhcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS---LLDKIFNVV 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~---~v~~~~~~~ 153 (424)
.|.+|+|+|+ |.||..+++.+...|+ +|++++++.++.+. .+ .+.. -.+ .|..+.+ .+.++..+.
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~----~~--~~Ga--~~~--~~~~~~~~~~~v~~~~~g~ 235 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRREL----AK--KVGA--DYV--INPFEEDVVKEVMDITDGN 235 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHH----HH--HHTC--SEE--ECTTTSCHHHHHHHHTTTS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH----HH--HhCC--CEE--ECCCCcCHHHHHHHHcCCC
Confidence 5778999999 9999999999999999 99999985432211 11 1111 112 3554433 333333333
Q ss_pred CccEEEEcccc
Q 042406 154 AFTHVMHLAAQ 164 (424)
Q Consensus 154 ~~d~vi~~Ag~ 164 (424)
++|+||+++|.
T Consensus 236 g~D~vid~~g~ 246 (348)
T 2d8a_A 236 GVDVFLEFSGA 246 (348)
T ss_dssp CEEEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 57999999874
No 413
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=96.99 E-value=0.00037 Score=70.16 Aligned_cols=39 Identities=26% Similarity=0.307 Sum_probs=30.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY 115 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 115 (424)
.+++|+++|||| |++|+.++..|++.|++|++++|+.++
T Consensus 361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~ 399 (523)
T 2o7s_A 361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYER 399 (523)
T ss_dssp -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHH
T ss_pred ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 356889999999 799999999999999999999996543
No 414
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=96.97 E-value=0.0008 Score=62.64 Aligned_cols=73 Identities=21% Similarity=0.204 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-HHHHHHHhhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-KSLLDKIFNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~v~~~~~~~~~d 156 (424)
.|++|+|+||+|.+|..+++.+...|++|++++++.++.+.. +. + +... ..|..+ .+..++ +. ++|
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~--~---ga~~-~~~~~~~~~~~~~-~~--~~d 191 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP----LA--L---GAEE-AATYAEVPERAKA-WG--GLD 191 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH----HH--T---TCSE-EEEGGGHHHHHHH-TT--SEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----Hh--c---CCCE-EEECCcchhHHHH-hc--Cce
Confidence 467899999999999999999999999999999965543221 11 1 1111 135555 333333 34 459
Q ss_pred EEEEcccc
Q 042406 157 HVMHLAAQ 164 (424)
Q Consensus 157 ~vi~~Ag~ 164 (424)
+||+ +|.
T Consensus 192 ~vid-~g~ 198 (302)
T 1iz0_A 192 LVLE-VRG 198 (302)
T ss_dssp EEEE-CSC
T ss_pred EEEE-CCH
Confidence 9999 874
No 415
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.95 E-value=0.0075 Score=56.46 Aligned_cols=115 Identities=14% Similarity=0.134 Sum_probs=70.9
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhh--hh-ccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKG--LL-ERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~--~~-~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
.|+|.|+|+ |.+|..++..|++.|+ +|+++|++.+..+......... .. ...++... . |. +.+++.
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d~----~a~~~a- 73 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT-D---DY----ADISGS- 73 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE-S---CG----GGGTTC-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC-C---CH----HHhCCC-
Confidence 478999998 9999999999999998 9999999876544321111110 00 01122211 2 22 245655
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||-+++..... .....+....|......+++.+.+......+|.+|.
T Consensus 74 -DiVi~avg~p~~~--g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN 122 (317)
T 2ewd_A 74 -DVVIITASIPGRP--KDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122 (317)
T ss_dssp -SEEEECCCCSSCC--SSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred -CEEEEeCCCCCCC--CCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 9999999863321 112234456677777777777776654435665554
No 416
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.94 E-value=0.0022 Score=58.79 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=49.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
..++|+++|+|+ |++|+.++..|++.|++|++++|+.++.+........ ...+.. .|+ +++ .+ .+.
T Consensus 116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~----~~~~~~--~~~---~~~---~~-~~~ 181 (272)
T 1p77_A 116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP----YGNIQA--VSM---DSI---PL-QTY 181 (272)
T ss_dssp CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----GSCEEE--EEG---GGC---CC-SCC
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc----cCCeEE--eeH---HHh---cc-CCC
Confidence 457899999998 8899999999999999999999975543332222111 112222 233 111 12 145
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+|||+++..
T Consensus 182 DivIn~t~~~ 191 (272)
T 1p77_A 182 DLVINATSAG 191 (272)
T ss_dssp SEEEECCCC-
T ss_pred CEEEECCCCC
Confidence 9999999864
No 417
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=96.91 E-value=0.00098 Score=63.90 Aligned_cols=74 Identities=15% Similarity=0.097 Sum_probs=50.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC---CchhhhHHHHHhhhhccCCeEEEEccCCC--HHHHHHHh
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN---NYYETSLKKARKGLLERAGVFVIDADIND--KSLLDKIF 150 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~v~~~~ 150 (424)
..++++|+|+|| |.||..+++.+...|++|++++++. ++.+. .+ .+ +...+ | .+ .+.+.+ .
T Consensus 178 ~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~~--~~---ga~~v--~-~~~~~~~~~~-~ 243 (366)
T 2cdc_A 178 TLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV----IE--ET---KTNYY--N-SSNGYDKLKD-S 243 (366)
T ss_dssp SSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH----HH--HH---TCEEE--E-CTTCSHHHHH-H
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH----HH--Hh---CCcee--c-hHHHHHHHHH-h
Confidence 356899999999 9999999999999999999999865 32211 11 11 23333 5 44 223433 2
Q ss_pred hccCccEEEEcccc
Q 042406 151 NVVAFTHVMHLAAQ 164 (424)
Q Consensus 151 ~~~~~d~vi~~Ag~ 164 (424)
. .++|+||+++|.
T Consensus 244 ~-~~~d~vid~~g~ 256 (366)
T 2cdc_A 244 V-GKFDVIIDATGA 256 (366)
T ss_dssp H-CCEEEEEECCCC
T ss_pred C-CCCCEEEECCCC
Confidence 2 357999999985
No 418
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.88 E-value=0.0022 Score=61.60 Aligned_cols=76 Identities=21% Similarity=0.256 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.|.+|+|+||+|.||..+++.+...|++|++.++ +++. ...+ .+ +... ..|..+.+..+++.+..++|+
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~----~~~~--~l---Ga~~-v~~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDAS----ELVR--KL---GADD-VIDYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGH----HHHH--HT---TCSE-EEETTSSCHHHHHHTSCCBSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHH----HHHH--Hc---CCCE-EEECCchHHHHHHhhcCCCCE
Confidence 5789999999999999999999999999998884 2211 1111 11 1211 135555444444443336799
Q ss_pred EEEcccc
Q 042406 158 VMHLAAQ 164 (424)
Q Consensus 158 vi~~Ag~ 164 (424)
||+++|.
T Consensus 252 vid~~g~ 258 (375)
T 2vn8_A 252 ILDNVGG 258 (375)
T ss_dssp EEESSCT
T ss_pred EEECCCC
Confidence 9999984
No 419
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=96.86 E-value=0.0074 Score=56.30 Aligned_cols=116 Identities=14% Similarity=0.053 Sum_probs=69.4
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC--CeEEEEeCCCCchhhhHHHHHhh-hhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG--DGVLGLDNFNNYYETSLKKARKG-LLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
|+|.|.| +|.+|..++..|++.| ++|++++|+.+..+......... ......+..... |. +.+++. |
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---d~----~~~~~a--D 71 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN---DW----AALADA--D 71 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES---CG----GGGTTC--S
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC---CH----HHhCCC--C
Confidence 6899999 5999999999999999 79999999754433322111100 011122333322 32 245555 9
Q ss_pred EEEEcccccCch--hhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEec
Q 042406 157 HVMHLAAQAGVR--YAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWAS 205 (424)
Q Consensus 157 ~vi~~Ag~~~~~--~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~S 205 (424)
+||-+++..... ............|..-...+++.+.+......+|.+|
T Consensus 72 vViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~t 122 (309)
T 1hyh_A 72 VVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVIS 122 (309)
T ss_dssp EEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred EEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 999998753210 0011123456678877888888887765543555544
No 420
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=96.79 E-value=0.0019 Score=63.80 Aligned_cols=37 Identities=24% Similarity=0.240 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
..|.+|+|+||+|.||...++.+...|++|++++++.
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~ 263 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSP 263 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCH
Confidence 3578899999999999999999999999999998744
No 421
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.79 E-value=0.0029 Score=60.01 Aligned_cols=76 Identities=20% Similarity=0.190 Sum_probs=50.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC--HHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND--KSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~v~~~~~~~~~ 155 (424)
.+.+|+|+||+|.||...++.+...|++|++++++.++.+.. + .++ .-.++ |..+ .+.+.+. ...++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~--~lG--a~~vi--~~~~~~~~~~~~~-~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT----K--KMG--ADIVL--NHKESLLNQFKTQ-GIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH----H--HHT--CSEEE--CTTSCHHHHHHHH-TCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----H--hcC--CcEEE--ECCccHHHHHHHh-CCCCc
Confidence 578899999999999999999999999999999854322111 1 111 11222 3332 2334443 33367
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||+++|.
T Consensus 219 Dvv~d~~g~ 227 (346)
T 3fbg_A 219 DYVFCTFNT 227 (346)
T ss_dssp EEEEESSCH
T ss_pred cEEEECCCc
Confidence 999999874
No 422
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=96.78 E-value=0.00091 Score=61.34 Aligned_cols=71 Identities=10% Similarity=0.061 Sum_probs=50.8
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..++|+++|+|+ |++|+.++..|++.|. +|++++|+.++.... . ..+.. ...+++.+++.+.
T Consensus 114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l---------a-~~~~~-----~~~~~~~~~~~~a- 176 (277)
T 3don_A 114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW---------S-LNINK-----INLSHAESHLDEF- 176 (277)
T ss_dssp TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC---------C-SCCEE-----ECHHHHHHTGGGC-
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH---------H-Hhccc-----ccHhhHHHHhcCC-
Confidence 357899999997 8999999999999998 899999965432221 1 11221 1345566667766
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
|+|||+...
T Consensus 177 -DiVInaTp~ 185 (277)
T 3don_A 177 -DIIINTTPA 185 (277)
T ss_dssp -SEEEECCC-
T ss_pred -CEEEECccC
Confidence 999998654
No 423
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=96.76 E-value=0.013 Score=54.67 Aligned_cols=115 Identities=16% Similarity=0.125 Sum_probs=76.0
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhh-hccCCeEEEEccCCCHHHHHHHhhccCccEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGL-LERAGVFVIDADINDKSLLDKIFNVVAFTHV 158 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~v 158 (424)
+|.|+|| |.+|..++..|+..|. +|+++|++.+..+.......... .....+.+... .|. +.+++. |+|
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~a~~~a--D~V 71 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSY----EDMRGS--DIV 71 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCG----GGGTTC--SEE
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCH----HHhCCC--CEE
Confidence 4899998 9999999999998887 79999998765543222221110 11123233321 232 256766 999
Q ss_pred EEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 159 MHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 159 i~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|..+|..... -......+..|..-...+++.+.+......+|.+|-
T Consensus 72 i~~ag~~~k~--G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 72 LVTAGIGRKP--GMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp EECCSCCCCS--SCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEeCCCCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 9999874321 223457788899989999999888765546776654
No 424
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.74 E-value=0.013 Score=55.70 Aligned_cols=76 Identities=22% Similarity=0.150 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC----HHHHHHHhh--
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND----KSLLDKIFN-- 151 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d----~~~v~~~~~-- 151 (424)
.+.+|||+|+ |.+|...++.+...|++|++++++.++.+. .+ .+... .++ |..+ .+.+.+...
T Consensus 168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~----~~--~lGa~--~~~--~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEV----AK--NCGAD--VTL--VVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHH----HH--HTTCS--EEE--ECCTTTSCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHH----HH--HhCCC--EEE--cCcccccHHHHHHHHhccc
Confidence 5778999997 999999999998999999999885432211 11 11111 222 4332 345555554
Q ss_pred -ccCccEEEEcccc
Q 042406 152 -VVAFTHVMHLAAQ 164 (424)
Q Consensus 152 -~~~~d~vi~~Ag~ 164 (424)
+.++|+||+++|.
T Consensus 237 ~g~g~D~vid~~g~ 250 (352)
T 1e3j_A 237 IGDLPNVTIDCSGN 250 (352)
T ss_dssp SSSCCSEEEECSCC
T ss_pred cCCCCCEEEECCCC
Confidence 3357999999874
No 425
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.72 E-value=0.024 Score=54.01 Aligned_cols=79 Identities=18% Similarity=0.106 Sum_probs=52.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCe-EEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHH----Hhhc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDG-VLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDK----IFNV 152 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~----~~~~ 152 (424)
.|.+|||+|+ |.+|...++.+...|++ |++++++.++.+. . ..+ ...+..+..|-.+.+.+.+ ...+
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~-----a-~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g 250 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKF-----A-KEI-CPEVVTHKVERLSAEESAKKIVESFGG 250 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHH-----H-HHH-CTTCEEEECCSCCHHHHHHHHHHHTSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH-----H-HHh-chhcccccccccchHHHHHHHHHHhCC
Confidence 5678999998 99999999999999997 8888875432221 1 112 2344444555444444333 3333
Q ss_pred cCccEEEEcccc
Q 042406 153 VAFTHVMHLAAQ 164 (424)
Q Consensus 153 ~~~d~vi~~Ag~ 164 (424)
.++|+||+++|.
T Consensus 251 ~g~Dvvid~~g~ 262 (363)
T 3m6i_A 251 IEPAVALECTGV 262 (363)
T ss_dssp CCCSEEEECSCC
T ss_pred CCCCEEEECCCC
Confidence 368999999874
No 426
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.72 E-value=0.022 Score=52.84 Aligned_cols=112 Identities=18% Similarity=0.137 Sum_probs=73.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC--eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD--GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
++++|.|+|| |.+|..++..|+.+|. +|+++|++.+.......... ....++... . |. +.+++.
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~---~~~~~i~~t-~---d~----~~l~~a-- 78 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEI---FNLPNVEIS-K---DL----SASAHS-- 78 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHH---HTCTTEEEE-S---CG----GGGTTC--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhh---hcCCCeEEe-C---CH----HHHCCC--
Confidence 4578999997 9999999999999998 99999997652112221111 222344442 3 32 346666
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
|+||-.+|.. .. -......+..|..-...+++.+.+......++.+|-
T Consensus 79 D~Vi~aag~~--~p-G~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 79 KVVIFTVNSL--GS-SQSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp SEEEECCCC-------CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred CEEEEcCCCC--CC-CCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 9999999873 22 234456788888888889998888765546666664
No 427
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=96.70 E-value=0.0038 Score=54.97 Aligned_cols=66 Identities=12% Similarity=0.011 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.+|+|.|+| +|.+|+.+++.|++.|++|++++|+.+..+ .....++... +..+++++. |+
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~---------~~~~~g~~~~--------~~~~~~~~~--Dv 86 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTA---------RLFPSAAQVT--------FQEEAVSSP--EV 86 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHH---------HHSBTTSEEE--------EHHHHTTSC--SE
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------HHHHcCCcee--------cHHHHHhCC--CE
Confidence 457899999 699999999999999999999998543211 1111244332 244566655 99
Q ss_pred EEEccc
Q 042406 158 VMHLAA 163 (424)
Q Consensus 158 vi~~Ag 163 (424)
||.+..
T Consensus 87 Vi~av~ 92 (215)
T 2vns_A 87 IFVAVF 92 (215)
T ss_dssp EEECSC
T ss_pred EEECCC
Confidence 998865
No 428
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.68 E-value=0.0075 Score=57.61 Aligned_cols=78 Identities=18% Similarity=0.102 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-HHHHHHHhhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-KSLLDKIFNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~v~~~~~~~~~d 156 (424)
.|.+|||+| +|.+|...++.+...|++|++++++.++.+.. ..++. -.++.-+-.+ .+.+.+...+.++|
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~------~~lGa--~~vi~~~~~~~~~~v~~~~~g~g~D 259 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA------FALGA--DHGINRLEEDWVERVYALTGDRGAD 259 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------HHHTC--SEEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH------HHcCC--CEEEcCCcccHHHHHHHHhCCCCce
Confidence 578899999 89999999999999999999999854322211 11111 1233211112 23455555554689
Q ss_pred EEEEcccc
Q 042406 157 HVMHLAAQ 164 (424)
Q Consensus 157 ~vi~~Ag~ 164 (424)
+||+++|.
T Consensus 260 ~vid~~g~ 267 (363)
T 3uog_A 260 HILEIAGG 267 (363)
T ss_dssp EEEEETTS
T ss_pred EEEECCCh
Confidence 99999983
No 429
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.66 E-value=0.0072 Score=58.98 Aligned_cols=71 Identities=18% Similarity=0.134 Sum_probs=55.4
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+.+++|+|.|+ |.+|+.+++.+.+.|++|++++.+.+.... . -.-.++..|..|.+.+.++++++
T Consensus 32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~-----~------~ad~~~~~~~~d~~~l~~~a~~~-- 97 (419)
T 4e4t_A 32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAG-----A------VADRHLRAAYDDEAALAELAGLC-- 97 (419)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHH-----H------HSSEEECCCTTCHHHHHHHHHHC--
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchh-----h------hCCEEEECCcCCHHHHHHHHhcC--
Confidence 467899999997 899999999999999999999875432111 0 01145668999999999999765
Q ss_pred cEEEE
Q 042406 156 THVMH 160 (424)
Q Consensus 156 d~vi~ 160 (424)
|+|+.
T Consensus 98 D~V~~ 102 (419)
T 4e4t_A 98 EAVST 102 (419)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99884
No 430
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.65 E-value=0.0065 Score=58.40 Aligned_cols=70 Identities=20% Similarity=0.211 Sum_probs=55.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+.+|+|+|.|+ |.+|+.+++.+.+.|++|++++.+.+.... .-.-.++..|..|.+.+.++++++ |
T Consensus 10 ~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~-----------~~ad~~~~~~~~d~~~l~~~~~~~--d 75 (377)
T 3orq_A 10 KFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCR-----------YVAHEFIQAKYDDEKALNQLGQKC--D 75 (377)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTG-----------GGSSEEEECCTTCHHHHHHHHHHC--S
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh-----------hhCCEEEECCCCCHHHHHHHHHhC--C
Confidence 56899999997 899999999999999999999975432111 012246779999999999999876 8
Q ss_pred EEEE
Q 042406 157 HVMH 160 (424)
Q Consensus 157 ~vi~ 160 (424)
+|..
T Consensus 76 vi~~ 79 (377)
T 3orq_A 76 VITY 79 (377)
T ss_dssp EEEE
T ss_pred ccee
Confidence 8754
No 431
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.65 E-value=0.0082 Score=53.76 Aligned_cols=83 Identities=16% Similarity=0.273 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEE-EeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhh-ccCc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLG-LDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFN-VVAF 155 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~-~~~~ 155 (424)
++|+|.|+|+ |.+|+.+++.+.+++++++. ++|+.+...........+... +..+ ..|.+.++.+.+.++ +.+.
T Consensus 2 ~MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~~~~gv~v~~dl~~l~--~~DV-vIDft~p~a~~~~~~l~~g~ 77 (243)
T 3qy9_A 2 ASMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPKATTPYQQYQHIADVK--GADV-AIDFSNPNLLFPLLDEDFHL 77 (243)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC--CCSCBCSCTTTCT--TCSE-EEECSCHHHHHHHHTSCCCC
T ss_pred CceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCccccCCCceeCCHHHHh--CCCE-EEEeCChHHHHHHHHHhcCC
Confidence 3689999999 99999999999999777665 466433100000000000000 2232 358888888777664 2256
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
.+|+.+.|.
T Consensus 78 ~vVigTTG~ 86 (243)
T 3qy9_A 78 PLVVATTGE 86 (243)
T ss_dssp CEEECCCSS
T ss_pred ceEeCCCCC
Confidence 777766653
No 432
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=96.64 E-value=0.0064 Score=55.81 Aligned_cols=74 Identities=15% Similarity=0.118 Sum_probs=49.5
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
...+++++|+|+ |++|+.++..|++.|. +|++++|+.++.+........ ...+..+. +.+ + .. +
T Consensus 123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~----~~~~~~~~--~~~---l---~~--~ 187 (281)
T 3o8q_A 123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAA----YGEVKAQA--FEQ---L---KQ--S 187 (281)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGG----GSCEEEEE--GGG---C---CS--C
T ss_pred CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhc----cCCeeEee--HHH---h---cC--C
Confidence 467899999998 8999999999999996 999999975543332222211 11334332 221 1 13 4
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
.|+|||+...
T Consensus 188 aDiIInaTp~ 197 (281)
T 3o8q_A 188 YDVIINSTSA 197 (281)
T ss_dssp EEEEEECSCC
T ss_pred CCEEEEcCcC
Confidence 5999998765
No 433
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.60 E-value=0.022 Score=53.39 Aligned_cols=37 Identities=35% Similarity=0.340 Sum_probs=31.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFN 113 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~ 113 (424)
.+.+++|+|.|+ |++|..+++.|+..|. +++++|+..
T Consensus 31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 356778999998 9999999999999996 788888754
No 434
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=96.59 E-value=0.013 Score=55.75 Aligned_cols=110 Identities=21% Similarity=0.172 Sum_probs=69.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchh------------------hhHHHHHhhhhccCCeEEE
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYE------------------TSLKKARKGLLERAGVFVI 136 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~------------------~~~~~~~~~~~~~~~v~~~ 136 (424)
.+.+++|+|.|+ |++|..+++.|+..|. +++++|++.-... ......-......-.++.+
T Consensus 115 ~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~ 193 (353)
T 3h5n_A 115 KLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEI 193 (353)
T ss_dssp HHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred HHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEEe
Confidence 356788999998 9999999999999996 7899988642110 0111111122234467778
Q ss_pred EccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCC
Q 042406 137 DADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSS 207 (424)
Q Consensus 137 ~~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~ 207 (424)
..++.+...+.+ +++. |+||.+..... + .-..+-++|.+.+. .+|+.+..
T Consensus 194 ~~~i~~~~~~~~-~~~~--DlVvd~~Dn~~--------~--------~r~~ln~~c~~~~~--p~i~~~~~ 243 (353)
T 3h5n_A 194 ALNINDYTDLHK-VPEA--DIWVVSADHPF--------N--------LINWVNKYCVRANQ--PYINAGYV 243 (353)
T ss_dssp ECCCCSGGGGGG-SCCC--SEEEECCCCST--------T--------HHHHHHHHHHHTTC--CEEEEEEE
T ss_pred ecccCchhhhhH-hccC--CEEEEecCChH--------H--------HHHHHHHHHHHhCC--CEEEEEEe
Confidence 888877654555 6655 99999763211 0 11234567788776 46766543
No 435
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=96.56 E-value=0.0025 Score=62.64 Aligned_cols=38 Identities=26% Similarity=0.229 Sum_probs=34.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN 114 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~ 114 (424)
.+.||+++|||++ .||+.+++.|++.|++|++.+++..
T Consensus 262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~ 299 (488)
T 3ond_A 262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPI 299 (488)
T ss_dssp CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 4789999999984 9999999999999999999998643
No 436
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=96.55 E-value=0.0041 Score=56.64 Aligned_cols=58 Identities=17% Similarity=0.138 Sum_probs=48.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+.||+++|+|+++.+|+.++..|+++|+.|+++.+.. ..+.+.+++.
T Consensus 157 ~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t------------------------------~~L~~~~~~A-- 204 (285)
T 3p2o_A 157 DLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT------------------------------KDLSLYTRQA-- 204 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------------------------SCHHHHHTTC--
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc------------------------------hhHHHHhhcC--
Confidence 57899999999999999999999999999999997632 1245667766
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||...|..
T Consensus 205 DIVI~Avg~p 214 (285)
T 3p2o_A 205 DLIIVAAGCV 214 (285)
T ss_dssp SEEEECSSCT
T ss_pred CEEEECCCCC
Confidence 9999988753
No 437
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.55 E-value=0.0047 Score=56.42 Aligned_cols=74 Identities=14% Similarity=0.103 Sum_probs=49.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..++|+++|+|+ |++|+.++..|++.|. +|++++|+.++.+...... ....+..+ ++.+. .. . +
T Consensus 117 ~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~-----~~~~~~~~--~~~~l---~~--~--~ 181 (272)
T 3pwz_A 117 PLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNEL-----DHSRLRIS--RYEAL---EG--Q--S 181 (272)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHH-----CCTTEEEE--CSGGG---TT--C--C
T ss_pred CccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHh-----ccCCeeEe--eHHHh---cc--c--C
Confidence 467999999998 8999999999999995 9999999654433322211 11223333 22221 11 3 4
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
.|+|||+...
T Consensus 182 ~DivInaTp~ 191 (272)
T 3pwz_A 182 FDIVVNATSA 191 (272)
T ss_dssp CSEEEECSSG
T ss_pred CCEEEECCCC
Confidence 5999998654
No 438
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.55 E-value=0.0037 Score=60.73 Aligned_cols=72 Identities=26% Similarity=0.160 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
..+++|+|.|+ |.+|..+++.|...|. +|++++|+.++..... ... +..+ .+ .+.+.+.+.+.
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la-----~~~---g~~~--~~---~~~l~~~l~~a-- 228 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELA-----RDL---GGEA--VR---FDELVDHLARS-- 228 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-----HHH---TCEE--CC---GGGHHHHHHTC--
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH-----HHc---CCce--ec---HHhHHHHhcCC--
Confidence 57899999998 9999999999999998 8999998543221111 111 1222 12 23466666665
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+||++.+.
T Consensus 229 DvVi~at~~ 237 (404)
T 1gpj_A 229 DVVVSATAA 237 (404)
T ss_dssp SEEEECCSS
T ss_pred CEEEEccCC
Confidence 999999764
No 439
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=96.54 E-value=0.0045 Score=58.74 Aligned_cols=99 Identities=17% Similarity=0.135 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-----C-eEEEEeCCCCchhhhHHHHHhhhhcc-CCeEEEEccCCCHHHHHHHh
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRG-----D-GVLGLDNFNNYYETSLKKARKGLLER-AGVFVIDADINDKSLLDKIF 150 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~v~~~~ 150 (424)
++++|.|.||||.+|+.|++.|++++ + +|+.+.+..+.... .... ...+.. ..+.+. |+ +.+ .+
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~-~~~~-~~~l~~~~~~~~~--~~-~~~----~~ 78 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGST-LGEH-HPHLTPLAHRVVE--PT-EAA----VL 78 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSB-GGGT-CTTCGGGTTCBCE--EC-CHH----HH
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCc-hhhh-cccccccceeeec--cC-CHH----Hh
Confidence 35789999999999999999999988 4 67776532211000 0000 000000 122222 22 222 24
Q ss_pred hccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc
Q 042406 151 NVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS 208 (424)
Q Consensus 151 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~ 208 (424)
.++ |+||.+.+... +..+++.+ +.|. ++|-.|+..
T Consensus 79 ~~~--DvVf~alg~~~------------------s~~~~~~~-~~G~--~vIDlSa~~ 113 (352)
T 2nqt_A 79 GGH--DAVFLALPHGH------------------SAVLAQQL-SPET--LIIDCGADF 113 (352)
T ss_dssp TTC--SEEEECCTTSC------------------CHHHHHHS-CTTS--EEEECSSTT
T ss_pred cCC--CEEEECCCCcc------------------hHHHHHHH-hCCC--EEEEECCCc
Confidence 445 99999987532 24566777 6663 788889864
No 440
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=96.51 E-value=0.003 Score=61.80 Aligned_cols=94 Identities=11% Similarity=0.123 Sum_probs=61.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-C---eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccC--CCHH-HHHHHhhc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG-D---GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI--NDKS-LLDKIFNV 152 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl--~d~~-~v~~~~~~ 152 (424)
++|+|.| .|.||+.++..|++++ . +|++++......+. . +. .++.+...++ .|.+ .+.+++++
T Consensus 14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~--~----~~---~g~~~~~~~Vdadnv~~~l~aLl~~ 83 (480)
T 2ph5_A 14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDV--A----QQ---YGVSFKLQQITPQNYLEVIGSTLEE 83 (480)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCH--H----HH---HTCEEEECCCCTTTHHHHTGGGCCT
T ss_pred CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhH--H----hh---cCCceeEEeccchhHHHHHHHHhcC
Confidence 4699999 5999999999999975 3 68888875433111 1 11 1345555555 4443 35667776
Q ss_pred cCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCC
Q 042406 153 VAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSS 207 (424)
Q Consensus 153 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~ 207 (424)
. |+|||++-... ...++++|.++|+ + |++++
T Consensus 84 ~--DvVIN~s~~~~------------------~l~Im~acleaGv--~--YlDTa 114 (480)
T 2ph5_A 84 N--DFLIDVSIGIS------------------SLALIILCNQKGA--L--YINAA 114 (480)
T ss_dssp T--CEEEECCSSSC------------------HHHHHHHHHHHTC--E--EEESS
T ss_pred C--CEEEECCcccc------------------CHHHHHHHHHcCC--C--EEECC
Confidence 3 99998663321 3568999999986 3 44554
No 441
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=96.50 E-value=0.0045 Score=59.04 Aligned_cols=76 Identities=20% Similarity=0.171 Sum_probs=50.5
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCH--HHHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDK--SLLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~~v~~~~~~~~ 154 (424)
.|.+|||+|| |.+|...++.+... |++|++++++.++.+. .+ .++ .-.+ .|..+. +.+.++..+.+
T Consensus 186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~----~~--~lG--a~~v--i~~~~~~~~~v~~~~~g~g 254 (359)
T 1h2b_A 186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKL----AE--RLG--ADHV--VDARRDPVKQVMELTRGRG 254 (359)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHH----HH--HTT--CSEE--EETTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHH----HH--HhC--CCEE--EeccchHHHHHHHHhCCCC
Confidence 5778999999 89999999988888 9999999985432211 11 111 1122 355553 34444443336
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+++|.
T Consensus 255 ~Dvvid~~G~ 264 (359)
T 1h2b_A 255 VNVAMDFVGS 264 (359)
T ss_dssp EEEEEESSCC
T ss_pred CcEEEECCCC
Confidence 7999999874
No 442
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.50 E-value=0.0036 Score=58.88 Aligned_cols=73 Identities=26% Similarity=0.201 Sum_probs=46.6
Q ss_pred eEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHH--HHHHHhhccCccEE
Q 042406 81 TVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKS--LLDKIFNVVAFTHV 158 (424)
Q Consensus 81 ~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~--~v~~~~~~~~~d~v 158 (424)
+|+|+||+|.+|..+++.+...|++|++++++.++.+.. + .++. -.+ .|..+.+ .+.++ ...++|+|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~----~--~lGa--~~~--i~~~~~~~~~~~~~-~~~~~d~v 220 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----R--VLGA--KEV--LAREDVMAERIRPL-DKQRWAAA 220 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----H--HTTC--SEE--EECC---------C-CSCCEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----H--HcCC--cEE--EecCCcHHHHHHHh-cCCcccEE
Confidence 699999999999999999999999999999976543222 1 1111 122 2444431 22222 22257999
Q ss_pred EEcccc
Q 042406 159 MHLAAQ 164 (424)
Q Consensus 159 i~~Ag~ 164 (424)
|+++|.
T Consensus 221 id~~g~ 226 (328)
T 1xa0_A 221 VDPVGG 226 (328)
T ss_dssp EECSTT
T ss_pred EECCcH
Confidence 999974
No 443
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=96.49 E-value=0.0076 Score=57.97 Aligned_cols=76 Identities=16% Similarity=0.210 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCC---CHH---HHHHHh
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIN---DKS---LLDKIF 150 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~---d~~---~v~~~~ 150 (424)
.|.+|||+| +|.+|...++.+...| .+|++++++.++.+. .+ .++ .-.++ |.. +.+ .+.++.
T Consensus 195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----~~--~lG--a~~vi--~~~~~~~~~~~~~v~~~~ 263 (380)
T 1vj0_A 195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKL----AE--EIG--ADLTL--NRRETSVEERRKAIMDIT 263 (380)
T ss_dssp BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHH----HH--HTT--CSEEE--ETTTSCHHHHHHHHHHHT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHH----HH--HcC--CcEEE--eccccCcchHHHHHHHHh
Confidence 467899999 8999999999999999 599999985432211 11 111 11233 443 322 233333
Q ss_pred hccCccEEEEcccc
Q 042406 151 NVVAFTHVMHLAAQ 164 (424)
Q Consensus 151 ~~~~~d~vi~~Ag~ 164 (424)
.+.++|+||+++|.
T Consensus 264 ~g~g~Dvvid~~g~ 277 (380)
T 1vj0_A 264 HGRGADFILEATGD 277 (380)
T ss_dssp TTSCEEEEEECSSC
T ss_pred CCCCCcEEEECCCC
Confidence 33357999999974
No 444
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=96.47 E-value=0.008 Score=55.18 Aligned_cols=58 Identities=21% Similarity=0.216 Sum_probs=48.2
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHH--HHhhcc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLD--KIFNVV 153 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~--~~~~~~ 153 (424)
.+.|++++|.|+++.+|+.++..|++.|+.|+++.|... .+. +.+++.
T Consensus 162 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~------------------------------~l~l~~~~~~A 211 (300)
T 4a26_A 162 EMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS------------------------------TEDMIDYLRTA 211 (300)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC------------------------------HHHHHHHHHTC
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC------------------------------CchhhhhhccC
Confidence 578999999999999999999999999999999987321 223 667766
Q ss_pred CccEEEEccccc
Q 042406 154 AFTHVMHLAAQA 165 (424)
Q Consensus 154 ~~d~vi~~Ag~~ 165 (424)
|+||...|..
T Consensus 212 --DIVI~Avg~p 221 (300)
T 4a26_A 212 --DIVIAAMGQP 221 (300)
T ss_dssp --SEEEECSCCT
T ss_pred --CEEEECCCCC
Confidence 9999998863
No 445
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=96.41 E-value=0.0093 Score=56.79 Aligned_cols=100 Identities=14% Similarity=0.136 Sum_probs=58.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+.++|.|.||+|.+|+.+++.|.+++. +++.+.+..+.... .... ...... .+ ..|+...+ ++.++++ |
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~-~~~~-~~~~~~-~v---~~dl~~~~--~~~~~~v--D 84 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQS-MESV-FPHLRA-QK---LPTLVSVK--DADFSTV--D 84 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSC-HHHH-CGGGTT-SC---CCCCBCGG--GCCGGGC--S
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCC-HHHh-CchhcC-cc---cccceecc--hhHhcCC--C
Confidence 446899999999999999999999874 77777653322111 1110 000111 11 12433222 3344544 9
Q ss_pred EEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc
Q 042406 157 HVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS 208 (424)
Q Consensus 157 ~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~ 208 (424)
+||.+++... +...+..+ +.|. ++|-.|+..
T Consensus 85 vVf~atp~~~------------------s~~~a~~~-~aG~--~VId~sa~~ 115 (359)
T 1xyg_A 85 AVFCCLPHGT------------------TQEIIKEL-PTAL--KIVDLSADF 115 (359)
T ss_dssp EEEECCCTTT------------------HHHHHHTS-CTTC--EEEECSSTT
T ss_pred EEEEcCCchh------------------HHHHHHHH-hCCC--EEEECCccc
Confidence 9999987532 23455555 5554 688888743
No 446
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.41 E-value=0.0098 Score=57.55 Aligned_cols=75 Identities=21% Similarity=0.256 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC----HHHHHHHhhc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND----KSLLDKIFNV 152 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d----~~~v~~~~~~ 152 (424)
.|.+|||+|+ |.||...++.+...|+ +|++++++.++.+. . ..-+..++ |..+ .+.+.+...+
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~----a-----~~lGa~~i--~~~~~~~~~~~~~~~~~g 252 (398)
T 2dph_A 185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKL----L-----SDAGFETI--DLRNSAPLRDQIDQILGK 252 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH----H-----HTTTCEEE--ETTSSSCHHHHHHHHHSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHH----H-----HHcCCcEE--cCCCcchHHHHHHHHhCC
Confidence 5788999997 9999999998888898 89999985432111 1 11233433 5443 3445555544
Q ss_pred cCccEEEEcccc
Q 042406 153 VAFTHVMHLAAQ 164 (424)
Q Consensus 153 ~~~d~vi~~Ag~ 164 (424)
.++|+||+++|.
T Consensus 253 ~g~Dvvid~~g~ 264 (398)
T 2dph_A 253 PEVDCGVDAVGF 264 (398)
T ss_dssp SCEEEEEECSCT
T ss_pred CCCCEEEECCCC
Confidence 467999999985
No 447
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=96.39 E-value=0.027 Score=53.65 Aligned_cols=38 Identities=16% Similarity=-0.011 Sum_probs=33.1
Q ss_pred CC-CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc
Q 042406 78 RG-LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY 115 (424)
Q Consensus 78 ~~-~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 115 (424)
.| .+|+|+||+|.+|...++.+...|++|++++++.+.
T Consensus 166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~ 204 (364)
T 1gu7_A 166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN 204 (364)
T ss_dssp TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 46 789999999999999999888899999999876543
No 448
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=96.38 E-value=0.012 Score=56.64 Aligned_cols=74 Identities=14% Similarity=0.214 Sum_probs=56.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
..+|+|+|+|+ |.+|+.+++.+.+.|++|++++........ ...-.++.+|..|.+.+.+++++.++|
T Consensus 9 ~~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~-----------~~~d~~~~~~~~d~~~l~~~~~~~~~d 76 (391)
T 1kjq_A 9 PAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAM-----------HVAHRSHVINMLDGDALRRVVELEKPH 76 (391)
T ss_dssp TTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGG-----------GGSSEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchh-----------hhccceEECCCCCHHHHHHHHHHcCCC
Confidence 45689999987 789999999999999999999875432100 011245678899999999998877789
Q ss_pred EEEEcc
Q 042406 157 HVMHLA 162 (424)
Q Consensus 157 ~vi~~A 162 (424)
.|+...
T Consensus 77 ~v~~~~ 82 (391)
T 1kjq_A 77 YIVPEI 82 (391)
T ss_dssp EEEECS
T ss_pred EEEECC
Confidence 998744
No 449
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=96.36 E-value=0.028 Score=52.04 Aligned_cols=35 Identities=20% Similarity=0.246 Sum_probs=32.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCC
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFN 113 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~ 113 (424)
+++|.|.||.|.+|..++..|.+.|++|++++|+.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 46899999889999999999999999999999854
No 450
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=96.35 E-value=0.0045 Score=57.61 Aligned_cols=83 Identities=22% Similarity=0.125 Sum_probs=56.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+.+++++|.|++..+|+.+++.|+..|..|++++|+..+... +................++.+.+.+.+++.
T Consensus 174 ~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~-----ra~~la~~~~~~t~~~~t~~~~L~e~l~~A-- 246 (320)
T 1edz_A 174 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT-----RGESLKLNKHHVEDLGEYSEDLLKKCSLDS-- 246 (320)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE-----SCCCSSCCCCEEEEEEECCHHHHHHHHHHC--
T ss_pred CCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHh-----HHHHHhhhcccccccccccHhHHHHHhccC--
Confidence 4789999999998889999999999999999999885321111 001111111111111124457889999988
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||...|..
T Consensus 247 DIVIsAtg~p 256 (320)
T 1edz_A 247 DVVITGVPSE 256 (320)
T ss_dssp SEEEECCCCT
T ss_pred CEEEECCCCC
Confidence 9999988864
No 451
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.34 E-value=0.0094 Score=55.12 Aligned_cols=71 Identities=18% Similarity=0.133 Sum_probs=51.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+.+++|+|.|+ |.||+.+++.|...|.+|++.+|+.++... .. ..++.++ +.+++.+++++.
T Consensus 152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~----~~-----~~g~~~~-----~~~~l~~~l~~a-- 214 (293)
T 3d4o_A 152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLAR----IA-----EMGMEPF-----HISKAAQELRDV-- 214 (293)
T ss_dssp CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HH-----HTTSEEE-----EGGGHHHHTTTC--
T ss_pred CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHH----HH-----HCCCeec-----ChhhHHHHhcCC--
Confidence 468899999996 999999999999999999999985432110 11 1133332 224567777766
Q ss_pred cEEEEccc
Q 042406 156 THVMHLAA 163 (424)
Q Consensus 156 d~vi~~Ag 163 (424)
|+|+++..
T Consensus 215 DvVi~~~p 222 (293)
T 3d4o_A 215 DVCINTIP 222 (293)
T ss_dssp SEEEECCS
T ss_pred CEEEECCC
Confidence 99999874
No 452
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=96.31 E-value=0.011 Score=55.85 Aligned_cols=93 Identities=24% Similarity=0.179 Sum_probs=55.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC---eEEEEe-CCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD---GVLGLD-NFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~---~V~~~~-r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
.|+|+|.||+|.+|+.+++.|.++++ +++.+. +.... . ... .....+.+. |. +++ .++++
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g--~-----~~~-~~g~~i~~~--~~-~~~----~~~~~- 69 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG--Q-----RMG-FAESSLRVG--DV-DSF----DFSSV- 69 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTT--C-----EEE-ETTEEEECE--EG-GGC----CGGGC-
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCC--C-----ccc-cCCcceEEe--cC-CHH----HhcCC-
Confidence 36899999999999999999997765 445553 31110 0 000 111112222 22 121 14555
Q ss_pred ccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc
Q 042406 155 FTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS 208 (424)
Q Consensus 155 ~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~ 208 (424)
|+||-+.+.. .+..+++.+.+.|. ++|.+|+..
T Consensus 70 -DvV~~a~g~~------------------~s~~~a~~~~~aG~--kvId~Sa~~ 102 (340)
T 2hjs_A 70 -GLAFFAAAAE------------------VSRAHAERARAAGC--SVIDLSGAL 102 (340)
T ss_dssp -SEEEECSCHH------------------HHHHHHHHHHHTTC--EEEETTCTT
T ss_pred -CEEEEcCCcH------------------HHHHHHHHHHHCCC--EEEEeCCCC
Confidence 9999988641 13456677777775 578888764
No 453
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.29 E-value=0.01 Score=55.14 Aligned_cols=72 Identities=14% Similarity=0.137 Sum_probs=51.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+.+++|+|.|+ |.||+.+++.|...|.+|++.+|+.++... .. + .++..+ +.+++.+++++.
T Consensus 154 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~----~~-~----~g~~~~-----~~~~l~~~l~~a-- 216 (300)
T 2rir_A 154 TIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLAR----IT-E----MGLVPF-----HTDELKEHVKDI-- 216 (300)
T ss_dssp CSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HH-H----TTCEEE-----EGGGHHHHSTTC--
T ss_pred CCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HH-H----CCCeEE-----chhhHHHHhhCC--
Confidence 578999999997 999999999999999999999995422111 10 1 133332 124567777766
Q ss_pred cEEEEcccc
Q 042406 156 THVMHLAAQ 164 (424)
Q Consensus 156 d~vi~~Ag~ 164 (424)
|+|+++...
T Consensus 217 DvVi~~~p~ 225 (300)
T 2rir_A 217 DICINTIPS 225 (300)
T ss_dssp SEEEECCSS
T ss_pred CEEEECCCh
Confidence 999998764
No 454
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=96.29 E-value=0.0034 Score=59.50 Aligned_cols=76 Identities=20% Similarity=0.258 Sum_probs=50.2
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhC--CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-HHHHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKR--GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-KSLLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-~~~v~~~~~~~~ 154 (424)
.+.+|||+|+ |.||...++.+... |++|++++++.++.+. .+ .++. -.+ .|..+ .+.+.++.++.+
T Consensus 170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~----~~--~lGa--~~v--i~~~~~~~~~~~~~~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDF----AL--ELGA--DYV--SEMKDAESLINKLTDGLG 238 (344)
T ss_dssp SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH----HH--HHTC--SEE--ECHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH----HH--HhCC--CEE--eccccchHHHHHhhcCCC
Confidence 5788999999 99999999999888 9999999985432211 11 1111 122 24433 344444444335
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+++|.
T Consensus 239 ~D~vid~~g~ 248 (344)
T 2h6e_A 239 ASIAIDLVGT 248 (344)
T ss_dssp EEEEEESSCC
T ss_pred ccEEEECCCC
Confidence 7999999874
No 455
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.29 E-value=0.023 Score=50.84 Aligned_cols=157 Identities=11% Similarity=0.110 Sum_probs=87.6
Q ss_pred CeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhc---cCc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNV---VAF 155 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~---~~~ 155 (424)
|+|+|.|++|.+|+.+++.+.+. |++++.+....+..+.. . . .+.. +.+|.+.++.+.+.+.. .+.
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~----~----~-~~~D-vvIDfT~p~a~~~~~~~a~~~g~ 70 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLL----T----D-GNTE-VVIDFTHPDVVMGNLEFLIDNGI 70 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHH----H----H-TTCC-EEEECSCTTTHHHHHHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHH----h----c-cCCc-EEEEccChHHHHHHHHHHHHcCC
Confidence 57999999999999999999876 88888665433221111 1 1 1223 55788888877655533 366
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEecCCccc-----------CC-CCCCCCCCCC
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSS-DPQPAIVWASSSSVY-----------GV-NKKVPFSEKD 222 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~~v~~SS~~vy-----------g~-~~~~~~~e~~ 222 (424)
++|+-..|... + -...+.++|++. +. .+++.+..+.= .. .+...+.|.+
T Consensus 71 ~~VigTTG~~~--------e--------~~~~l~~aa~~~~~~--~vv~a~N~siGv~ll~~l~~~aa~~~~dieIiE~H 132 (245)
T 1p9l_A 71 HAVVGTTGFTA--------E--------RFQQVESWLVAKPNT--SVLIAPNFAIGAVLSMHFAKQAARFFDSAEVIELH 132 (245)
T ss_dssp EEEECCCCCCH--------H--------HHHHHHHHHHTSTTC--EEEECSCCCHHHHHHHHHHHHHGGGCSEEEEEEEE
T ss_pred CEEEcCCCCCH--------H--------HHHHHHHHHHhCCCC--CEEEECCccHHHHHHHHHHHHHHhhcCCEEEEECc
Confidence 88887665311 1 012345555654 43 46666664440 00 0111122221
Q ss_pred CCCCCCChHHHHHHHHHHHHHHHHH-------------------HhCCcEEEEEeccccCC
Q 042406 223 RTDQPASLYAATKKAGEAIAHAYNH-------------------IYGLSITGLRFFTVYGP 264 (424)
Q Consensus 223 ~~~~~~~~Y~~sK~~~e~~~~~~~~-------------------~~~i~~~~vrp~~v~G~ 264 (424)
....--.+=|.++..+|.+...... ..++.+..+|-|.|.|.
T Consensus 133 H~~K~DaPSGTA~~lae~i~~~~~~~~~~~~~~~~~~~g~r~~~~~~i~i~s~R~g~ivg~ 193 (245)
T 1p9l_A 133 HPHKADAPSGTAARTAKLIAEARKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAH 193 (245)
T ss_dssp CTTCCSSSCHHHHHHHHHHHHHTTTSCCCCCCCCSCCTTTTCEEETTEEEEEEECTTCCEE
T ss_pred ccCCCCCCCHHHHHHHHHHHHhhcccccccccccccccCCCCCCCCcceEEEEECCCCCeE
Confidence 1111112236677777776543210 01577889999988875
No 456
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=96.29 E-value=0.0074 Score=54.97 Aligned_cols=58 Identities=22% Similarity=0.228 Sum_probs=48.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+.|++++|.|+++.+|+.++..|+.+|+.|+++.+.. ..+.+.+++.
T Consensus 158 ~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t------------------------------~~L~~~~~~A-- 205 (285)
T 3l07_A 158 KTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT------------------------------TDLKSHTTKA-- 205 (285)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------------------------SSHHHHHTTC--
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc------------------------------hhHHHhcccC--
Confidence 57899999999999999999999999999999987621 1345667766
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||...|..
T Consensus 206 DIVI~Avg~p 215 (285)
T 3l07_A 206 DILIVAVGKP 215 (285)
T ss_dssp SEEEECCCCT
T ss_pred CEEEECCCCC
Confidence 9999988753
No 457
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.28 E-value=0.023 Score=54.42 Aligned_cols=75 Identities=21% Similarity=0.313 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-----HHHHHHHhh
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-----KSLLDKIFN 151 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-----~~~v~~~~~ 151 (424)
.+.+|||+|+ |.+|...++.+...|+ +|++++++.++.+.. + .+ +... ..|..+ .+.+.++..
T Consensus 192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~--~l---Ga~~-vi~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----K--VF---GATD-FVNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----H--HT---TCCE-EECGGGCSSCHHHHHHHHHT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----H--Hh---CCce-EEeccccchhHHHHHHHHhC
Confidence 5778999996 9999999999999998 799998865433221 1 11 2211 124432 223444444
Q ss_pred ccCccEEEEcccc
Q 042406 152 VVAFTHVMHLAAQ 164 (424)
Q Consensus 152 ~~~~d~vi~~Ag~ 164 (424)
+ ++|+||+++|.
T Consensus 261 ~-g~D~vid~~g~ 272 (374)
T 1cdo_A 261 G-GVDFSLECVGN 272 (374)
T ss_dssp S-CBSEEEECSCC
T ss_pred C-CCCEEEECCCC
Confidence 4 67999999874
No 458
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=96.27 E-value=0.0069 Score=54.84 Aligned_cols=56 Identities=16% Similarity=0.093 Sum_probs=47.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+.|++++|.|+++.+|+.++..|+++|+.|+++.+.. ..+.+.+++. |
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t------------------------------~~L~~~~~~A--D 195 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT------------------------------KDIGSMTRSS--K 195 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC------------------------------SCHHHHHHHS--S
T ss_pred cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc------------------------------ccHHHhhccC--C
Confidence 7899999999999999999999999999999997621 2345667766 9
Q ss_pred EEEEcccc
Q 042406 157 HVMHLAAQ 164 (424)
Q Consensus 157 ~vi~~Ag~ 164 (424)
+||...|.
T Consensus 196 IVI~Avg~ 203 (276)
T 3ngx_A 196 IVVVAVGR 203 (276)
T ss_dssp EEEECSSC
T ss_pred EEEECCCC
Confidence 99998875
No 459
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.26 E-value=0.0054 Score=56.46 Aligned_cols=41 Identities=22% Similarity=0.279 Sum_probs=34.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhh
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS 119 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 119 (424)
+.++|.|.|+ |.+|..++..|++.|++|++.+|+.+..+..
T Consensus 3 ~~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 43 (283)
T 4e12_A 3 GITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAA 43 (283)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 3578999986 9999999999999999999999976654443
No 460
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.26 E-value=0.015 Score=56.00 Aligned_cols=70 Identities=23% Similarity=0.242 Sum_probs=54.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+.+|+|+|.|+ |.+|+.+++.+.+.|++|++++.+.+.... ...-..+..|..|.+.+.++++.. |
T Consensus 12 ~~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~~~~~-----------~~ad~~~~~~~~d~~~l~~~~~~~--d 77 (389)
T 3q2o_A 12 LPGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKNSPCA-----------QVADIEIVASYDDLKAIQHLAEIS--D 77 (389)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTTCTTT-----------TTCSEEEECCTTCHHHHHHHHHTC--S
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchH-----------HhCCceEecCcCCHHHHHHHHHhC--C
Confidence 57899999997 889999999999999999999875432100 111245668999999999999876 8
Q ss_pred EEEE
Q 042406 157 HVMH 160 (424)
Q Consensus 157 ~vi~ 160 (424)
+|..
T Consensus 78 vI~~ 81 (389)
T 3q2o_A 78 VVTY 81 (389)
T ss_dssp EEEE
T ss_pred Eeee
Confidence 8743
No 461
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=96.26 E-value=0.0077 Score=54.83 Aligned_cols=58 Identities=24% Similarity=0.273 Sum_probs=47.9
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
.+.||+++|.|.++.+|+.++..|+..|+.|+++.+.. ..+.+.+++.
T Consensus 158 ~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T------------------------------~~L~~~~~~A-- 205 (286)
T 4a5o_A 158 DLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT------------------------------RDLADHVSRA-- 205 (286)
T ss_dssp CCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC------------------------------SCHHHHHHTC--
T ss_pred CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC------------------------------cCHHHHhccC--
Confidence 47899999999999999999999999999999997622 1245667766
Q ss_pred cEEEEccccc
Q 042406 156 THVMHLAAQA 165 (424)
Q Consensus 156 d~vi~~Ag~~ 165 (424)
|+||...|..
T Consensus 206 DIVI~Avg~p 215 (286)
T 4a5o_A 206 DLVVVAAGKP 215 (286)
T ss_dssp SEEEECCCCT
T ss_pred CEEEECCCCC
Confidence 9999988753
No 462
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.25 E-value=0.0078 Score=56.37 Aligned_cols=74 Identities=20% Similarity=0.203 Sum_probs=49.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.|.+|+|+||+|.+|...++.+...|++|+++++.. ..... ..++. -.+ .|..+.+.+.+..+ ++|+
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-----~~~~~--~~lGa--~~~--i~~~~~~~~~~~~~--g~D~ 218 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-----NHAFL--KALGA--EQC--INYHEEDFLLAIST--PVDA 218 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-----HHHHH--HHHTC--SEE--EETTTSCHHHHCCS--CEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-----hHHHH--HHcCC--CEE--EeCCCcchhhhhcc--CCCE
Confidence 578899999999999999999999999999887521 11111 11111 122 35555443455555 4599
Q ss_pred EEEcccc
Q 042406 158 VMHLAAQ 164 (424)
Q Consensus 158 vi~~Ag~ 164 (424)
||++.|.
T Consensus 219 v~d~~g~ 225 (321)
T 3tqh_A 219 VIDLVGG 225 (321)
T ss_dssp EEESSCH
T ss_pred EEECCCc
Confidence 9999874
No 463
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.24 E-value=0.019 Score=53.67 Aligned_cols=67 Identities=10% Similarity=0.051 Sum_probs=47.1
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
..+|+|.|.|. |.+|..+++.|++.|++|++++|+.+..+. . ...++... .+..+++++. |
T Consensus 29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~----l-----~~~g~~~~-------~~~~e~~~~a--D 89 (320)
T 4dll_A 29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAAS----L-----AALGATIH-------EQARAAARDA--D 89 (320)
T ss_dssp CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHH----H-----HTTTCEEE-------SSHHHHHTTC--S
T ss_pred cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHH----H-----HHCCCEee-------CCHHHHHhcC--C
Confidence 46789999986 999999999999999999999996432211 1 11233221 2345666766 9
Q ss_pred EEEEcc
Q 042406 157 HVMHLA 162 (424)
Q Consensus 157 ~vi~~A 162 (424)
+||-+.
T Consensus 90 vVi~~v 95 (320)
T 4dll_A 90 IVVSML 95 (320)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 998765
No 464
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=96.23 E-value=0.011 Score=55.99 Aligned_cols=74 Identities=15% Similarity=0.224 Sum_probs=48.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCH---HHHHHHhhcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDK---SLLDKIFNVV 153 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~v~~~~~~~ 153 (424)
.+.+|+|+|| |.+|..+++.+...|+ +|++++++.++.+. ...+ .-.+ .|..+. +.+.++. ..
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~------~~~l---a~~v--~~~~~~~~~~~~~~~~-~~ 230 (343)
T 2dq4_A 164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAF------ARPY---ADRL--VNPLEEDLLEVVRRVT-GS 230 (343)
T ss_dssp TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGG------GTTT---CSEE--ECTTTSCHHHHHHHHH-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHH------HHHh---HHhc--cCcCccCHHHHHHHhc-CC
Confidence 5678999999 9999999999999999 99999985432111 1111 1112 355442 2333333 33
Q ss_pred CccEEEEcccc
Q 042406 154 AFTHVMHLAAQ 164 (424)
Q Consensus 154 ~~d~vi~~Ag~ 164 (424)
++|+||+++|.
T Consensus 231 g~D~vid~~g~ 241 (343)
T 2dq4_A 231 GVEVLLEFSGN 241 (343)
T ss_dssp CEEEEEECSCC
T ss_pred CCCEEEECCCC
Confidence 67999999874
No 465
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=96.21 E-value=0.01 Score=56.89 Aligned_cols=74 Identities=18% Similarity=0.174 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.|.+|||+|+ |.+|...++.+...|++|++++++.++.+... + ++. -.+ .|..+.+.++++.. ++|+
T Consensus 194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-----~-lGa--~~v--i~~~~~~~~~~~~~--g~Dv 260 (369)
T 1uuf_A 194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-----A-LGA--DEV--VNSRNADEMAAHLK--SFDF 260 (369)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-----H-HTC--SEE--EETTCHHHHHTTTT--CEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-----H-cCC--cEE--eccccHHHHHHhhc--CCCE
Confidence 5778999998 88999999999899999999998655432211 1 111 122 36666655555443 5699
Q ss_pred EEEcccc
Q 042406 158 VMHLAAQ 164 (424)
Q Consensus 158 vi~~Ag~ 164 (424)
||+++|.
T Consensus 261 vid~~g~ 267 (369)
T 1uuf_A 261 ILNTVAA 267 (369)
T ss_dssp EEECCSS
T ss_pred EEECCCC
Confidence 9999985
No 466
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=96.20 E-value=0.037 Score=52.27 Aligned_cols=69 Identities=13% Similarity=0.121 Sum_probs=51.2
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..+.||+|.|.|- |-||+.+++.|...|.+|++.+|+...... . .++.++ +++++++++.
T Consensus 169 ~~l~gktvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~-----~g~~~~-------~~l~ell~~s- 228 (345)
T 4g2n_A 169 MGLTGRRLGIFGM-GRIGRAIATRARGFGLAIHYHNRTRLSHAL------E-----EGAIYH-------DTLDSLLGAS- 228 (345)
T ss_dssp CCCTTCEEEEESC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHH------H-----TTCEEC-------SSHHHHHHTC-
T ss_pred cccCCCEEEEEEe-ChhHHHHHHHHHHCCCEEEEECCCCcchhh------h-----cCCeEe-------CCHHHHHhhC-
Confidence 4688999999996 999999999999999999999986432111 0 022221 3567788877
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
|+|+.+.-.
T Consensus 229 -DvV~l~~Pl 237 (345)
T 4g2n_A 229 -DIFLIAAPG 237 (345)
T ss_dssp -SEEEECSCC
T ss_pred -CEEEEecCC
Confidence 999887653
No 467
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=96.18 E-value=0.0075 Score=57.15 Aligned_cols=97 Identities=14% Similarity=0.102 Sum_probs=57.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
+++|.|.||+|.+|+.+++.|.+++. +++.+.+..+..... ... ...+. +. ....+.+.+ + +++ +|+
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~-~~~-~~~~~--g~--~~~~~~~~~---~-~~~--vDv 71 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPV-HFV-HPNLR--GR--TNLKFVPPE---K-LEP--ADI 71 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBG-GGT-CGGGT--TT--CCCBCBCGG---G-CCC--CSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchh-HHh-Cchhc--Cc--ccccccchh---H-hcC--CCE
Confidence 47899999999999999999998865 777776533211100 000 00010 10 011222322 2 344 499
Q ss_pred EEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCC
Q 042406 158 VMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSS 207 (424)
Q Consensus 158 vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~ 207 (424)
||.+++... +..+++.+.+.|. ++|-.|+.
T Consensus 72 V~~a~g~~~------------------s~~~a~~~~~aG~--~VId~Sa~ 101 (345)
T 2ozp_A 72 LVLALPHGV------------------FAREFDRYSALAP--VLVDLSAD 101 (345)
T ss_dssp EEECCCTTH------------------HHHTHHHHHTTCS--EEEECSST
T ss_pred EEEcCCcHH------------------HHHHHHHHHHCCC--EEEEcCcc
Confidence 999987521 3445666667765 68888885
No 468
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=96.18 E-value=0.02 Score=54.26 Aligned_cols=112 Identities=18% Similarity=0.148 Sum_probs=68.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCc--------------hhhhHHH----HHhhhhccCCeEEEE
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNY--------------YETSLKK----ARKGLLERAGVFVID 137 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~--------------~~~~~~~----~~~~~~~~~~v~~~~ 137 (424)
+...+|+|.|+ |++|.++++.|+..|. +++++|...-. ....+.. .-.+.+..-.+..+.
T Consensus 34 L~~~~VlivG~-GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~lnp~v~v~~~~ 112 (346)
T 1y8q_A 34 LRASRVLLVGL-KGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNLNPMVDVKVDT 112 (346)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHTCTTSEEEEEC
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhHCCCeEEEEEe
Confidence 45668999997 8999999999999997 78888654210 0001111 111122233456666
Q ss_pred ccCCCHHHHHHHhhccCccEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCcccCC
Q 042406 138 ADINDKSLLDKIFNVVAFTHVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSSVYGV 212 (424)
Q Consensus 138 ~Dl~d~~~v~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~vyg~ 212 (424)
.++.+ ...+++++. |+||.+... ...-..+-++|.+.+. .+|..++.+.+|.
T Consensus 113 ~~~~~--~~~~~~~~~--dvVv~~~d~-----------------~~~r~~ln~~~~~~~i--p~i~~~~~G~~G~ 164 (346)
T 1y8q_A 113 EDIEK--KPESFFTQF--DAVCLTCCS-----------------RDVIVKVDQICHKNSI--KFFTGDVFGYHGY 164 (346)
T ss_dssp SCGGG--CCHHHHTTC--SEEEEESCC-----------------HHHHHHHHHHHHHTTC--EEEEEEEEBTEEE
T ss_pred cccCc--chHHHhcCC--CEEEEcCCC-----------------HHHHHHHHHHHHHcCC--CEEEEeecccEEE
Confidence 55543 234567755 999986421 1122345667777775 6888877776663
No 469
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.16 E-value=0.013 Score=53.25 Aligned_cols=39 Identities=26% Similarity=0.210 Sum_probs=35.1
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhh
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET 118 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 118 (424)
+++++|+|+ |+.|+.++..|++.|.+|++++|+.++.+.
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~ 156 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDF 156 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 899999997 999999999999999999999998765444
No 470
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.15 E-value=0.0074 Score=56.30 Aligned_cols=68 Identities=16% Similarity=0.168 Sum_probs=48.0
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
..++|+|.|.|. |.+|..+++.|++.|++|++++|+.+..+... ..++.. ..+..+++++.
T Consensus 18 ~~~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~---------~~g~~~-------~~~~~~~~~~a-- 78 (310)
T 3doj_A 18 GSHMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV---------EHGASV-------CESPAEVIKKC-- 78 (310)
T ss_dssp CCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH---------HTTCEE-------CSSHHHHHHHC--
T ss_pred cccCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH---------HCCCeE-------cCCHHHHHHhC--
Confidence 456789999985 99999999999999999999999765433221 112221 12344566666
Q ss_pred cEEEEcc
Q 042406 156 THVMHLA 162 (424)
Q Consensus 156 d~vi~~A 162 (424)
|+||-+.
T Consensus 79 Dvvi~~v 85 (310)
T 3doj_A 79 KYTIAML 85 (310)
T ss_dssp SEEEECC
T ss_pred CEEEEEc
Confidence 9888765
No 471
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=96.14 E-value=0.028 Score=53.79 Aligned_cols=75 Identities=20% Similarity=0.309 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-----HHHHHHHhh
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-----KSLLDKIFN 151 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-----~~~v~~~~~ 151 (424)
.+.+|||+|+ |.||..+++.+...|+ +|++++++.++.+.. + .+.. -.+ .|..+ .+.+.++..
T Consensus 191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~--~lGa--~~v--i~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA----K--EVGA--TEC--VNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----H--HTTC--SEE--ECGGGCSSCHHHHHHHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----H--HhCC--ceE--ecccccchhHHHHHHHHhC
Confidence 5778999995 9999999999999998 799998865433221 1 1111 122 24432 223444433
Q ss_pred ccCccEEEEcccc
Q 042406 152 VVAFTHVMHLAAQ 164 (424)
Q Consensus 152 ~~~~d~vi~~Ag~ 164 (424)
+ ++|+||+++|.
T Consensus 260 ~-g~D~vid~~g~ 271 (374)
T 2jhf_A 260 G-GVDFSFEVIGR 271 (374)
T ss_dssp S-CBSEEEECSCC
T ss_pred C-CCcEEEECCCC
Confidence 3 67999999874
No 472
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=96.13 E-value=0.036 Score=55.88 Aligned_cols=36 Identities=36% Similarity=0.366 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFN 113 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~ 113 (424)
+.+.+|+|.|+ |++|..+++.|+..|. +++++|++.
T Consensus 324 L~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 324 IKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 46789999998 9999999999999996 788888864
No 473
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.10 E-value=0.029 Score=53.74 Aligned_cols=75 Identities=17% Similarity=0.251 Sum_probs=49.3
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-----HHHHHHHhh
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-----KSLLDKIFN 151 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-----~~~v~~~~~ 151 (424)
.|.+|+|+|+ |.||...++.+...|+ +|++++++.++.+.. + .+ +... ..|..+ .+.+.++..
T Consensus 195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~--~l---Ga~~-vi~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA----K--AL---GATD-CLNPRELDKPVQDVITELTA 263 (376)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----H--HT---TCSE-EECGGGCSSCHHHHHHHHHT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----H--Hh---CCcE-EEccccccchHHHHHHHHhC
Confidence 5778999996 9999999999999998 799998865432221 1 11 1111 124432 233444444
Q ss_pred ccCccEEEEcccc
Q 042406 152 VVAFTHVMHLAAQ 164 (424)
Q Consensus 152 ~~~~d~vi~~Ag~ 164 (424)
+ ++|+||+++|.
T Consensus 264 ~-g~Dvvid~~G~ 275 (376)
T 1e3i_A 264 G-GVDYSLDCAGT 275 (376)
T ss_dssp S-CBSEEEESSCC
T ss_pred C-CccEEEECCCC
Confidence 4 67999999874
No 474
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.07 E-value=0.024 Score=55.83 Aligned_cols=120 Identities=14% Similarity=0.147 Sum_probs=74.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-----CCeEEEEeCCCCchhhhHHHHHhhh--hccCCeEEEEccCCCHHHHHHHhh
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKR-----GDGVLGLDNFNNYYETSLKKARKGL--LERAGVFVIDADINDKSLLDKIFN 151 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~v~~~~~Dl~d~~~v~~~~~ 151 (424)
.++|.|.||++..|..++..|+++ +.+|+++|++.+..+.... ..... .......+... +| .+++++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~-~~~~~l~~~~~~~~I~~t--~D---~~eal~ 101 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAG-ACDVFIREKAPDIEFAAT--TD---PEEAFT 101 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHH-HHHHHHHHHCTTSEEEEE--SC---HHHHHS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHH-HHHHHhccCCCCCEEEEE--CC---HHHHHc
Confidence 468999999777688898889888 6789999998765444221 11111 11112222221 23 445677
Q ss_pred ccCccEEEEcccccCchhhccCh------------------HHHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 152 VVAFTHVMHLAAQAGVRYAMQNP------------------NSYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 152 ~~~~d~vi~~Ag~~~~~~~~~~~------------------~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
+. |+||..++....+....+. -.....|+.....+++.+++..+...+|.+|-
T Consensus 102 ~A--D~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TN 172 (472)
T 1u8x_X 102 DV--DFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSN 172 (472)
T ss_dssp SC--SEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CC--CEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 77 9999999874322111111 11245567778888999988887756665554
No 475
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.05 E-value=0.011 Score=53.79 Aligned_cols=36 Identities=22% Similarity=0.393 Sum_probs=28.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhC-CCeEEE-EeCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKR-GDGVLG-LDNF 112 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~-~~r~ 112 (424)
+++++|.|+|++|.+|+.+++.+.+. +.+++. ++|+
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~ 42 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRT 42 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCT
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEec
Confidence 45689999999999999999999876 567666 4664
No 476
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=96.04 E-value=0.013 Score=57.39 Aligned_cols=35 Identities=29% Similarity=0.535 Sum_probs=31.2
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY 115 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 115 (424)
|+|.|.| .|.+|..++..|++.|++|++++|+.+.
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~ 35 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTK 35 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence 5799998 5999999999999999999999996543
No 477
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.04 E-value=0.022 Score=54.99 Aligned_cols=75 Identities=21% Similarity=0.185 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC----HHHHHHHhhc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND----KSLLDKIFNV 152 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d----~~~v~~~~~~ 152 (424)
.|.+|||+|+ |.||...++.+...|+ +|++++++.++.+. . . .-+..+ .|..+ .+.+.+...+
T Consensus 185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~----a--~---~lGa~~--i~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAH----A--K---AQGFEI--ADLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----H--H---HTTCEE--EETTSSSCHHHHHHHHHSS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHH----H--H---HcCCcE--EccCCcchHHHHHHHHhCC
Confidence 5778999995 9999999998888998 68888875432111 1 1 123343 34443 2345555444
Q ss_pred cCccEEEEcccc
Q 042406 153 VAFTHVMHLAAQ 164 (424)
Q Consensus 153 ~~~d~vi~~Ag~ 164 (424)
.++|+||.++|.
T Consensus 253 ~g~Dvvid~~G~ 264 (398)
T 1kol_A 253 PEVDCAVDAVGF 264 (398)
T ss_dssp SCEEEEEECCCT
T ss_pred CCCCEEEECCCC
Confidence 357999999985
No 478
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.02 E-value=0.039 Score=51.09 Aligned_cols=41 Identities=20% Similarity=0.282 Sum_probs=35.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhh
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYET 118 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 118 (424)
...++|.|.|+ |.+|..++..|++.|++|++++|+.+..+.
T Consensus 13 ~~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~ 53 (302)
T 1f0y_A 13 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAK 53 (302)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred ccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 34578999998 999999999999999999999997655443
No 479
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.02 E-value=0.0075 Score=57.51 Aligned_cols=74 Identities=20% Similarity=0.239 Sum_probs=50.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCH-HHHHHHhhccCcc
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDK-SLLDKIFNVVAFT 156 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~-~~v~~~~~~~~~d 156 (424)
.+.+|||+|+ |.+|..+++.+...|++|++++++.++.+.... ++ .-.+ .|..+. +..+++.. ++|
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~------lG--a~~v--~~~~~~~~~~~~~~~--~~D 245 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK------MG--ADHY--IATLEEGDWGEKYFD--TFD 245 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH------HT--CSEE--EEGGGTSCHHHHSCS--CEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH------cC--CCEE--EcCcCchHHHHHhhc--CCC
Confidence 5788999999 999999999988899999999987654332211 11 1122 244433 33333332 569
Q ss_pred EEEEcccc
Q 042406 157 HVMHLAAQ 164 (424)
Q Consensus 157 ~vi~~Ag~ 164 (424)
+||+++|.
T Consensus 246 ~vid~~g~ 253 (360)
T 1piw_A 246 LIVVCASS 253 (360)
T ss_dssp EEEECCSC
T ss_pred EEEECCCC
Confidence 99999985
No 480
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=95.98 E-value=0.022 Score=54.20 Aligned_cols=73 Identities=10% Similarity=0.130 Sum_probs=49.4
Q ss_pred CCCeEEEEcCCChhHHHH-HHHH-HhCCCe-EEEEeCCCC---chhhhHHHHHhhhhccCCeEEEEccCCCH--HHHHHH
Q 042406 78 RGLTVLVTGAAGFVGSHV-SLAL-KKRGDG-VLGLDNFNN---YYETSLKKARKGLLERAGVFVIDADINDK--SLLDKI 149 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l-~~~L-~~~g~~-V~~~~r~~~---~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~--~~v~~~ 149 (424)
++.+|+|+|| |.+|... ++.+ ...|++ |++++++.+ +.+.. + .-+...+ |..+. ..+.++
T Consensus 172 ~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~----~-----~lGa~~v--~~~~~~~~~i~~~ 239 (357)
T 2b5w_A 172 DPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII----E-----ELDATYV--DSRQTPVEDVPDV 239 (357)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH----H-----HTTCEEE--ETTTSCGGGHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH----H-----HcCCccc--CCCccCHHHHHHh
Confidence 4478999999 9999999 8877 678987 999998664 32211 1 1233444 55432 225555
Q ss_pred hhccCccEEEEcccc
Q 042406 150 FNVVAFTHVMHLAAQ 164 (424)
Q Consensus 150 ~~~~~~d~vi~~Ag~ 164 (424)
.+ ++|+||+++|.
T Consensus 240 -~g-g~Dvvid~~g~ 252 (357)
T 2b5w_A 240 -YE-QMDFIYEATGF 252 (357)
T ss_dssp -SC-CEEEEEECSCC
T ss_pred -CC-CCCEEEECCCC
Confidence 44 67999999874
No 481
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.98 E-value=0.0076 Score=57.49 Aligned_cols=76 Identities=21% Similarity=0.246 Sum_probs=53.2
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccC----------------
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADI---------------- 140 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl---------------- 140 (424)
..+.+|+|+|+ |-+|..+++.+...|++|++++|+....+... .-+..++..|+
T Consensus 182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~---------~lGa~~~~l~~~~~~~~gya~~~~~~~ 251 (381)
T 3p2y_A 182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR---------SVGAQWLDLGIDAAGEGGYARELSEAE 251 (381)
T ss_dssp ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH---------HTTCEECCCC-------------CHHH
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---------HcCCeEEeccccccccccchhhhhHHH
Confidence 46678999998 99999999999999999999999754332211 11333333221
Q ss_pred --CCHHHHHHHhhccCccEEEEcccc
Q 042406 141 --NDKSLLDKIFNVVAFTHVMHLAAQ 164 (424)
Q Consensus 141 --~d~~~v~~~~~~~~~d~vi~~Ag~ 164 (424)
.+.+.+.+++++. |+||.++..
T Consensus 252 ~~~~~~~l~e~l~~a--DIVI~tv~i 275 (381)
T 3p2y_A 252 RAQQQQALEDAITKF--DIVITTALV 275 (381)
T ss_dssp HHHHHHHHHHHHTTC--SEEEECCCC
T ss_pred HhhhHHHHHHHHhcC--CEEEECCCC
Confidence 1234677778877 999998754
No 482
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.97 E-value=0.041 Score=52.51 Aligned_cols=75 Identities=17% Similarity=0.204 Sum_probs=49.1
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-----HHHHHHHhh
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-----KSLLDKIFN 151 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-----~~~v~~~~~ 151 (424)
.|.+|||+|+ |.+|...++.+...|+ +|++++++.++.+... .++. -.+ .|..+ .+.+.++..
T Consensus 190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~------~lGa--~~v--i~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK------EFGA--TEC--INPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH------HHTC--SEE--ECGGGCSSCHHHHHHHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH------HcCC--ceE--eccccccccHHHHHHHHhC
Confidence 5778999996 9999999998888998 7999988655432211 1111 122 24332 233444443
Q ss_pred ccCccEEEEcccc
Q 042406 152 VVAFTHVMHLAAQ 164 (424)
Q Consensus 152 ~~~~d~vi~~Ag~ 164 (424)
+ ++|+||+++|.
T Consensus 259 ~-g~D~vid~~g~ 270 (373)
T 2fzw_A 259 G-GVDYSFECIGN 270 (373)
T ss_dssp S-CBSEEEECSCC
T ss_pred C-CCCEEEECCCc
Confidence 3 67999999874
No 483
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.97 E-value=0.0071 Score=56.63 Aligned_cols=42 Identities=21% Similarity=0.206 Sum_probs=34.4
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhh
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETS 119 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 119 (424)
+..++|.|.|+ |.+|..++..|++.|++|++.+++.+..+..
T Consensus 4 ~~~~kI~vIGa-G~MG~~iA~~la~~G~~V~l~d~~~~~~~~~ 45 (319)
T 2dpo_A 4 PAAGDVLIVGS-GLVGRSWAMLFASGGFRVKLYDIEPRQITGA 45 (319)
T ss_dssp ---CEEEEECC-SHHHHHHHHHHHHTTCCEEEECSCHHHHHHH
T ss_pred CCCceEEEEee-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 34578999997 9999999999999999999999987654443
No 484
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.96 E-value=0.049 Score=51.69 Aligned_cols=35 Identities=37% Similarity=0.358 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFN 113 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~ 113 (424)
.|.+|||+|+ |.+|...++.+...|+ +|++++++.
T Consensus 171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~ 206 (356)
T 1pl8_A 171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSA 206 (356)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 5778999996 9999999998888998 899999854
No 485
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=95.95 E-value=0.023 Score=53.41 Aligned_cols=103 Identities=15% Similarity=0.083 Sum_probs=58.0
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-CCeEEEEeCCCC--chhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCc
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKR-GDGVLGLDNFNN--YYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAF 155 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~ 155 (424)
+++|.|.||+|++|+.|++.|.++ +.++..+...++ .........-........+.+... .+.+ ++++++
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~~~~---~~~~~~-- 76 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--SDIS---EFSPGV-- 76 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--SSGG---GTCTTC--
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--CCHH---HHhcCC--
Confidence 478999999999999999999985 457777754331 111111111000111112333322 0222 222445
Q ss_pred cEEEEcccccCchhhccChHHHHHHHHHHHHHHHHHHHhcCCCCeEEEecCCc
Q 042406 156 THVMHLAAQAGVRYAMQNPNSYVESNIAGFVNLLETCKSSDPQPAIVWASSSS 208 (424)
Q Consensus 156 d~vi~~Ag~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS~~ 208 (424)
|+||-+.+.. -+..+++.+.+.|. ++|-.|+..
T Consensus 77 Dvvf~a~p~~------------------~s~~~~~~~~~~g~--~vIDlSa~f 109 (337)
T 3dr3_A 77 DVVFLATAHE------------------VSHDLAPQFLEAGC--VVFDLSGAF 109 (337)
T ss_dssp SEEEECSCHH------------------HHHHHHHHHHHTTC--EEEECSSTT
T ss_pred CEEEECCChH------------------HHHHHHHHHHHCCC--EEEEcCCcc
Confidence 9999887531 12345555666665 788888863
No 486
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=95.95 E-value=0.019 Score=54.55 Aligned_cols=75 Identities=20% Similarity=0.106 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
.|.+|+|+|+ |.||...++.+...|++|++++++.++.+. .. ..++.. .+ .|..+.+.+.++.. ++|+
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~----~~-~~lGa~--~v--i~~~~~~~~~~~~~--g~D~ 247 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREE----AL-QDLGAD--DY--VIGSDQAKMSELAD--SLDY 247 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHH----HH-TTSCCS--CE--EETTCHHHHHHSTT--TEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHH----HH-HHcCCc--ee--eccccHHHHHHhcC--CCCE
Confidence 5788999996 999999999988899999999986543211 11 111111 12 35556666666554 4699
Q ss_pred EEEcccc
Q 042406 158 VMHLAAQ 164 (424)
Q Consensus 158 vi~~Ag~ 164 (424)
||+++|.
T Consensus 248 vid~~g~ 254 (357)
T 2cf5_A 248 VIDTVPV 254 (357)
T ss_dssp EEECCCS
T ss_pred EEECCCC
Confidence 9999985
No 487
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.93 E-value=0.025 Score=54.34 Aligned_cols=39 Identities=26% Similarity=0.265 Sum_probs=34.6
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY 115 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 115 (424)
...+++|+|+|+ |.+|..+++.+...|++|++.+|+..+
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~ 207 (384)
T 1l7d_A 169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAAT 207 (384)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 357889999996 999999999999999999999997654
No 488
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.93 E-value=0.015 Score=54.01 Aligned_cols=67 Identities=16% Similarity=0.199 Sum_probs=46.5
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
..+|+|.|.|. |.+|..+++.|++.|++|++++|+.+..+... . .++.. . .+..+++++. |
T Consensus 7 ~~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~----~-----~g~~~----~---~~~~e~~~~a--D 67 (306)
T 3l6d_A 7 SFEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSPGKAAALV----A-----AGAHL----C---ESVKAALSAS--P 67 (306)
T ss_dssp CCSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH----H-----HTCEE----C---SSHHHHHHHS--S
T ss_pred cCCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----H-----CCCee----c---CCHHHHHhcC--C
Confidence 34678999985 99999999999999999999999654322211 1 12211 1 2345566666 9
Q ss_pred EEEEcc
Q 042406 157 HVMHLA 162 (424)
Q Consensus 157 ~vi~~A 162 (424)
+||-+.
T Consensus 68 vVi~~v 73 (306)
T 3l6d_A 68 ATIFVL 73 (306)
T ss_dssp EEEECC
T ss_pred EEEEEe
Confidence 999775
No 489
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=95.92 E-value=0.02 Score=55.89 Aligned_cols=74 Identities=15% Similarity=0.229 Sum_probs=56.8
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCccE
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFTH 157 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d~ 157 (424)
..|+|+|+|+ |.+|+.+++.+.+.|++|++++....... ... .-.++.+|..|.+.+.++++..++|.
T Consensus 18 ~~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~-----~~~------ad~~~~~~~~d~~~l~~~~~~~~~d~ 85 (433)
T 2dwc_A 18 SAQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPA-----MQV------AHRSYVGNMMDKDFLWSVVEREKPDA 85 (433)
T ss_dssp TCCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHH-----HHH------SSEEEESCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh-----hhh------cceEEECCCCCHHHHHHHHHHcCCCE
Confidence 4578999987 78999999999999999999987543210 000 11456789999999999988667899
Q ss_pred EEEccc
Q 042406 158 VMHLAA 163 (424)
Q Consensus 158 vi~~Ag 163 (424)
|+....
T Consensus 86 V~~~~e 91 (433)
T 2dwc_A 86 IIPEIE 91 (433)
T ss_dssp EEECSS
T ss_pred EEECcc
Confidence 987554
No 490
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=95.91 E-value=0.035 Score=54.45 Aligned_cols=120 Identities=11% Similarity=0.039 Sum_probs=74.6
Q ss_pred CCeEEEEcCCChhHHHHHHHHHhC-----CCeEEEEeCCC--CchhhhHHHHHhhh--hccCCeEEEEccCCCHHHHHHH
Q 042406 79 GLTVLVTGAAGFVGSHVSLALKKR-----GDGVLGLDNFN--NYYETSLKKARKGL--LERAGVFVIDADINDKSLLDKI 149 (424)
Q Consensus 79 ~~~vlItGg~G~iG~~l~~~L~~~-----g~~V~~~~r~~--~~~~~~~~~~~~~~--~~~~~v~~~~~Dl~d~~~v~~~ 149 (424)
.|+|.|.||++..|..++..|+++ +.+|+++|++. +..+.... ..... .......+... +| .+++
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~~~~~~~-~~~~~~~~~~~~~~i~~t--~D---~~ea 80 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGA-LAKRMVEKAGVPIEIHLT--LD---RRRA 80 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHH-HHHHHHHHTTCCCEEEEE--SC---HHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHHHHHHHH-HHHHHHhhcCCCcEEEEe--CC---HHHH
Confidence 468999999887799999999984 57899999977 55443211 11111 11122333221 23 4457
Q ss_pred hhccCccEEEEcccccCchhhccChH------------------HHHHHHHHHHHHHHHHHHhcCCCCeEEEecC
Q 042406 150 FNVVAFTHVMHLAAQAGVRYAMQNPN------------------SYVESNIAGFVNLLETCKSSDPQPAIVWASS 206 (424)
Q Consensus 150 ~~~~~~d~vi~~Ag~~~~~~~~~~~~------------------~~~~~N~~g~~~ll~a~~~~~~~~~~v~~SS 206 (424)
+++. |+||..++....+....+.. .....|+.....+++.+++..+...+|.+|-
T Consensus 81 l~gA--D~VVitagv~~~~~~~rd~~ip~~~g~~~~et~G~ggi~~~~rni~i~~~i~~~i~~~~P~a~ii~~tN 153 (450)
T 1s6y_A 81 LDGA--DFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINFTN 153 (450)
T ss_dssp HTTC--SEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred hCCC--CEEEEcCCCCCCcchhhhhhhhhhcCcccccccccchHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 7777 99999998743221111100 1345677778889999998887756665554
No 491
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.91 E-value=0.012 Score=56.91 Aligned_cols=39 Identities=26% Similarity=0.217 Sum_probs=34.3
Q ss_pred CCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCc
Q 042406 76 STRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNY 115 (424)
Q Consensus 76 ~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~ 115 (424)
...+++|+|+|+ |.+|..+++.+...|++|++++++...
T Consensus 169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~ 207 (401)
T 1x13_A 169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEV 207 (401)
T ss_dssp EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGG
T ss_pred CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHH
Confidence 356889999997 999999999999999999999996543
No 492
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=95.91 E-value=0.051 Score=50.83 Aligned_cols=70 Identities=11% Similarity=0.181 Sum_probs=51.3
Q ss_pred CCCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhcc
Q 042406 74 PRSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVV 153 (424)
Q Consensus 74 ~~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~ 153 (424)
...+.||+|.|.|- |-||+.+++.|...|.+|++.+|+...... -...+. .+++.+++++.
T Consensus 132 ~~~l~gktvGIiGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-------------~~~~~~-----~~~l~ell~~a 192 (324)
T 3evt_A 132 TSTLTGQQLLIYGT-GQIGQSLAAKASALGMHVIGVNTTGHPADH-------------FHETVA-----FTATADALATA 192 (324)
T ss_dssp CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSCCCCTT-------------CSEEEE-----GGGCHHHHHHC
T ss_pred CccccCCeEEEECc-CHHHHHHHHHHHhCCCEEEEECCCcchhHh-------------Hhhccc-----cCCHHHHHhhC
Confidence 34688999999996 999999999999999999999996532110 001111 23566778877
Q ss_pred CccEEEEcccc
Q 042406 154 AFTHVMHLAAQ 164 (424)
Q Consensus 154 ~~d~vi~~Ag~ 164 (424)
|+|+.+.-.
T Consensus 193 --DvV~l~lPl 201 (324)
T 3evt_A 193 --NFIVNALPL 201 (324)
T ss_dssp --SEEEECCCC
T ss_pred --CEEEEcCCC
Confidence 999887643
No 493
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=95.90 E-value=0.022 Score=53.72 Aligned_cols=65 Identities=14% Similarity=0.028 Sum_probs=49.4
Q ss_pred CCCCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccC
Q 042406 75 RSTRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVA 154 (424)
Q Consensus 75 ~~~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~ 154 (424)
..+.||+|.|.|. |-||+.+++.|...|.+|++.+|+.... ..... ..++.+++++.
T Consensus 167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~--------------~~~~~-------~~sl~ell~~a- 223 (340)
T 4dgs_A 167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTLSG--------------VDWIA-------HQSPVDLARDS- 223 (340)
T ss_dssp CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCTT--------------SCCEE-------CSSHHHHHHTC-
T ss_pred ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcccc--------------cCcee-------cCCHHHHHhcC-
Confidence 4688999999997 9999999999999999999999864320 11111 13567788877
Q ss_pred ccEEEEccc
Q 042406 155 FTHVMHLAA 163 (424)
Q Consensus 155 ~d~vi~~Ag 163 (424)
|+|+.+.-
T Consensus 224 -DvVil~vP 231 (340)
T 4dgs_A 224 -DVLAVCVA 231 (340)
T ss_dssp -SEEEECC-
T ss_pred -CEEEEeCC
Confidence 99998764
No 494
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.90 E-value=0.012 Score=55.84 Aligned_cols=71 Identities=18% Similarity=0.147 Sum_probs=48.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
..|.+|||+|+ |.||...++.+...|++|++++++.++.+.. + .+ +...+. .+.+.+.+ ++|
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~--~l---Ga~~v~---~~~~~~~~-----~~D 236 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA----L--SM---GVKHFY---TDPKQCKE-----ELD 236 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH----H--HT---TCSEEE---SSGGGCCS-----CEE
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----H--hc---CCCeec---CCHHHHhc-----CCC
Confidence 35788999997 9999999999999999999999876543321 1 11 122221 34433322 569
Q ss_pred EEEEccccc
Q 042406 157 HVMHLAAQA 165 (424)
Q Consensus 157 ~vi~~Ag~~ 165 (424)
+||+++|..
T Consensus 237 ~vid~~g~~ 245 (348)
T 3two_A 237 FIISTIPTH 245 (348)
T ss_dssp EEEECCCSC
T ss_pred EEEECCCcH
Confidence 999999853
No 495
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.88 E-value=0.033 Score=53.21 Aligned_cols=75 Identities=19% Similarity=0.223 Sum_probs=48.9
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHhCCC-eEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC-----HHHHHHHhh
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKKRGD-GVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND-----KSLLDKIFN 151 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d-----~~~v~~~~~ 151 (424)
.+.+|||+|+ |.||...++.+...|+ +|++++++.++.+.. + .++. -.++ |..+ .+.+.++..
T Consensus 191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~--~lGa--~~vi--~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA----I--ELGA--TECL--NPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH----H--HTTC--SEEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----H--HcCC--cEEE--ecccccchHHHHHHHHhC
Confidence 5788999996 9999999998888898 799998865433221 1 1111 1222 3332 233444444
Q ss_pred ccCccEEEEcccc
Q 042406 152 VVAFTHVMHLAAQ 164 (424)
Q Consensus 152 ~~~~d~vi~~Ag~ 164 (424)
+ ++|+||+++|.
T Consensus 260 g-g~Dvvid~~g~ 271 (373)
T 1p0f_A 260 G-GVDYAVECAGR 271 (373)
T ss_dssp S-CBSEEEECSCC
T ss_pred C-CCCEEEECCCC
Confidence 4 67999999874
No 496
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.87 E-value=0.017 Score=55.55 Aligned_cols=77 Identities=18% Similarity=0.189 Sum_probs=53.9
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEcc----------------C
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDAD----------------I 140 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~D----------------l 140 (424)
..+.+|+|+|+ |-+|..+++.+...|++|++.|++....+.... -+..++..+ +
T Consensus 188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~---------~G~~~~~~~~~~~~d~~~~~~ya~e~ 257 (405)
T 4dio_A 188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS---------LGAKFIAVEDEEFKAAETAGGYAKEM 257 (405)
T ss_dssp ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH---------TTCEECCCCC----------------
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH---------cCCceeecccccccccccccchhhhc
Confidence 35678999998 999999999999999999999997654322111 122232222 2
Q ss_pred CC------HHHHHHHhhccCccEEEEccccc
Q 042406 141 ND------KSLLDKIFNVVAFTHVMHLAAQA 165 (424)
Q Consensus 141 ~d------~~~v~~~~~~~~~d~vi~~Ag~~ 165 (424)
++ .+.+.+++++. |+||+++.+.
T Consensus 258 s~~~~~~~~~~l~e~l~~a--DVVI~tvlip 286 (405)
T 4dio_A 258 SGEYQVKQAALVAEHIAKQ--DIVITTALIP 286 (405)
T ss_dssp -CHHHHHHHHHHHHHHHTC--SEEEECCCCS
T ss_pred chhhhhhhHhHHHHHhcCC--CEEEECCcCC
Confidence 23 34778888877 9999987653
No 497
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.87 E-value=0.016 Score=55.25 Aligned_cols=76 Identities=18% Similarity=0.168 Sum_probs=47.4
Q ss_pred CCCeEEEEcCCChhHHHHHHHHHh-CCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCC--HHHHHHHhhccC
Q 042406 78 RGLTVLVTGAAGFVGSHVSLALKK-RGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADIND--KSLLDKIFNVVA 154 (424)
Q Consensus 78 ~~~~vlItGg~G~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d--~~~v~~~~~~~~ 154 (424)
.+.+|||+||+|.+|...++.+.. .|.+|++++++.++.+. . ..+ +...+ .|..+ .+.+.+. ...+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~----~--~~l---Gad~v-i~~~~~~~~~v~~~-~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEW----V--KSL---GAHHV-IDHSKPLAAEVAAL-GLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHH----H--HHT---TCSEE-ECTTSCHHHHHHTT-CSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHH----H--HHc---CCCEE-EeCCCCHHHHHHHh-cCCC
Confidence 577899999999999988887766 58999999985432211 1 111 22211 24333 1222222 2236
Q ss_pred ccEEEEcccc
Q 042406 155 FTHVMHLAAQ 164 (424)
Q Consensus 155 ~d~vi~~Ag~ 164 (424)
+|+||+++|.
T Consensus 240 ~Dvvid~~g~ 249 (363)
T 4dvj_A 240 PAFVFSTTHT 249 (363)
T ss_dssp EEEEEECSCH
T ss_pred ceEEEECCCc
Confidence 7999999874
No 498
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.87 E-value=0.065 Score=52.22 Aligned_cols=37 Identities=24% Similarity=0.368 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCC
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNN 114 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~ 114 (424)
..+.+|.|.|. |++|..++..|++.|++|+++|.+.+
T Consensus 19 ~~m~~IaViGl-GYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 19 SHMASLSVLGL-GYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CCCCEEEEEcc-CHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 45678999985 99999999999999999999998654
No 499
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.86 E-value=0.019 Score=55.63 Aligned_cols=71 Identities=15% Similarity=0.107 Sum_probs=54.3
Q ss_pred CCCCeEEEEcCCChhHHHHHHHHHhCCCeEEEEeCCCCchhhhHHHHHhhhhccCCeEEEEccCCCHHHHHHHhhccCcc
Q 042406 77 TRGLTVLVTGAAGFVGSHVSLALKKRGDGVLGLDNFNNYYETSLKKARKGLLERAGVFVIDADINDKSLLDKIFNVVAFT 156 (424)
Q Consensus 77 ~~~~~vlItGg~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~v~~~~~~~~~d 156 (424)
+.+++|+|.|| |.+|+.+++.+.+.|++|++++ +.+..... .. .....+..|..|.+.+.++++.+ |
T Consensus 22 m~~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~~p~~~--------~a-d~~~~~~~~~~d~~~l~~~a~~~--d 88 (403)
T 3k5i_A 22 WNSRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADNSPAKQ--------IS-AHDGHVTGSFKEREAVRQLAKTC--D 88 (403)
T ss_dssp CSCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STTCTTGG--------GC-CSSCCEESCTTCHHHHHHHHTTC--S
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCCCcHHH--------hc-cccceeecCCCCHHHHHHHHHhC--C
Confidence 46789999998 8999999999999999999999 54321110 01 11245778999999999999876 8
Q ss_pred EEEE
Q 042406 157 HVMH 160 (424)
Q Consensus 157 ~vi~ 160 (424)
+|+-
T Consensus 89 ~i~~ 92 (403)
T 3k5i_A 89 VVTA 92 (403)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 500
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.86 E-value=0.018 Score=54.69 Aligned_cols=32 Identities=28% Similarity=0.280 Sum_probs=27.8
Q ss_pred CeEEEEcCCChhHHHHHHHHHhCC-CeEEEEeC
Q 042406 80 LTVLVTGAAGFVGSHVSLALKKRG-DGVLGLDN 111 (424)
Q Consensus 80 ~~vlItGg~G~iG~~l~~~L~~~g-~~V~~~~r 111 (424)
++|.|.||+|.+|+.+++.|.+++ .+|+.+.+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~ 41 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAA 41 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEc
Confidence 589999999999999999998875 47877764
Done!