BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042415
(151 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALKW 123
+ Y+HGGG + S + +H++ ++ A V++ S+DYRLAPEH + AAY+D+ AL+W
Sbjct: 86 VVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQW 145
Query: 124 VASHFKISAHGYETWLNTRANFTCVF 149
+ + WL A+F+ F
Sbjct: 146 IKD-------SRDEWLTNFADFSNCF 164
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 63 SLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALK 122
++ YYHGGG GS T+ + LS ++ +VVS+DYRLAPE+ A ED++AALK
Sbjct: 75 AVLYYHGGGFVFGS--IETHDHICRRLSRLSDSVVVSVDYRLAPEYKFPTAVEDAYAALK 132
Query: 123 WVASH 127
WVA
Sbjct: 133 WVADR 137
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 63 SLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALK 122
++ YYHGGG +GS T+ + L+ + +VVS+DYRLAPEH AA ED++ A K
Sbjct: 78 AVVYYHGGGFVLGS--VETHDHVCRRLANLSGAVVVSVDYRLAPEHKFPAAVEDAYDAAK 135
Query: 123 WVASHF 128
WVA ++
Sbjct: 136 WVADNY 141
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 63 SLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALK 122
+L YYHGGG +G T+ L+ +V S+DYRLAPEH AA ED++ AL+
Sbjct: 76 ALVYYHGGGWVVGD--LETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQ 133
Query: 123 WVASH 127
W+A
Sbjct: 134 WIAER 138
>pdb|3FAK|A Chain A, Structural And Functional Analysis Of A Hormone-Sensitive
Lipase Like Este5 From A Metagenome Library
pdb|3G9T|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Butyrate For 5sec
pdb|3G9U|A Chain A, Crystal Structure Of Este5, Was Soaked By P-nitrophenyl
Butyrate For 5min
pdb|3G9Z|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Caprylate
pdb|3H17|A Chain A, Crystal Structure Of Este5-Pmsf (I)
pdb|3H18|A Chain A, Crystal Structure Of Este5-pmsf (ii)
pdb|3H19|A Chain A, Crystal Structure Of Este5, Was Soaked By Methyl Alcohol
pdb|3H1A|A Chain A, Crystal Structure Of Este5, Was Soaked By Ethyl Alcohol
pdb|3H1B|A Chain A, Crystal Structure Of Este5, Was Soaked By Isopropyl
Alcohol
pdb|3L1H|A Chain A, Crystal Structure Of Este5, Was Soaked By Fecl3
pdb|3L1I|A Chain A, Crystal Structure Of Este5, Was Soaked By Cuso4
pdb|3L1J|A Chain A, Crystal Structure Of Este5, Was Soaked By Znso4
Length = 322
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 56 PLKQTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYE 115
P Q ++ Y HGGG MGS +T+ + +G +S + + +DYRLAPEH AA E
Sbjct: 75 PGCQAGKAILYLHGGGYVMGS--INTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVE 132
Query: 116 DSWAALKWV 124
D AA +W+
Sbjct: 133 DGVAAYRWL 141
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 63 SLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALK 122
+L YYHGGG +G T+ L+ +V S+DYRLAPEH AA ED++ AL+
Sbjct: 76 ALVYYHGGGWVVGD--LETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQ 133
Query: 123 WVASH 127
W+A
Sbjct: 134 WIAER 138
>pdb|3V9A|A Chain A, Crystal Structure Of EsteraseLIPASE FROM UNCULTURED
BACTERIUM
Length = 309
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 56 PLKQTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYE 115
P Q ++ Y HGGG MGS +T+ + +G +S + + +DYRLAPEH AA E
Sbjct: 62 PGCQAGKAILYLHGGGYVMGS--INTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVE 119
Query: 116 DSWAALKWV 124
D AA +W+
Sbjct: 120 DGVAAYRWL 128
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 63 SLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALK 122
+L YYHGG +G T+ L+ +V S+DYRLAPEH AA ED++ AL+
Sbjct: 76 ALVYYHGGSWVVGD--LETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQ 133
Query: 123 WVASH 127
W+A
Sbjct: 134 WIAER 138
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%)
Query: 54 DPPLKQTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAA 113
D P + + ++HGG S + Y + + +VVS++YR APEH A
Sbjct: 105 DAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCA 164
Query: 114 YEDSWAALKWVASH 127
Y+D W ALKWV S
Sbjct: 165 YDDGWTALKWVMSQ 178
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALKW 123
L YYHGGG +G +Y +++ + +S+DYRLAPE+ AA DS+ ALKW
Sbjct: 93 LVYYHGGGFVLGD--IESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKW 150
Query: 124 V 124
V
Sbjct: 151 V 151
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALKW 123
L YYHGGG +G +Y +++ + +S+DYRLAPE+ AA DS+ ALKW
Sbjct: 93 LVYYHGGGFVLGD--IESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKW 150
Query: 124 V 124
V
Sbjct: 151 V 151
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALKW 123
L YYHGGG +G +Y +++ + +S+DYRLAPE+ AA DS+ ALKW
Sbjct: 93 LVYYHGGGFVLGD--IESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKW 150
Query: 124 V 124
V
Sbjct: 151 V 151
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALKW 123
L YYHGGG +G +Y +++ + +S+DYRLAPE+ AA DS+ ALKW
Sbjct: 93 LVYYHGGGFVLGD--IESYDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKW 150
Query: 124 V 124
V
Sbjct: 151 V 151
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 58 KQTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDS 117
K L YYHGGG + S ++ ++ +N VVS+DYRLAPEH AA D
Sbjct: 76 KPDSPVLVYYHGGGFVICS--IESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDC 133
Query: 118 WAALKWVASH 127
+ A KWVA +
Sbjct: 134 YDATKWVAEN 143
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALKW 123
+ ++HGG S + Y L +VVS++YR APE+ AY+D W AL W
Sbjct: 116 ILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNW 175
Query: 124 VASH 127
V S
Sbjct: 176 VNSR 179
>pdb|3QH4|A Chain A, Crystal Structure Of Esterase Lipw From Mycobacterium
Marinum
Length = 317
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAALKW 123
+ Y H GG +G+ T H L+ +A VVS+DYRLAPEH AA D+ L W
Sbjct: 88 VVYCHAGGFALGN--LDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIEVLTW 145
Query: 124 V 124
V
Sbjct: 146 V 146
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAA--- 120
+ Y+HGGG GSP ST+ L+ +++ + S+DYRLAPE+ AA +D AA
Sbjct: 83 ILYFHGGGYISGSP--STHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRA 140
Query: 121 -LKWVASHFKISAHG 134
LK S +I G
Sbjct: 141 LLKTAGSADRIIIAG 155
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSWAA--- 120
+ Y+HGGG GSP ST+ L+ +++ + S+DYRLAPE+ AA +D AA
Sbjct: 97 ILYFHGGGYISGSP--STHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYRA 154
Query: 121 -LKWVASHFKISAHG 134
LK S +I G
Sbjct: 155 LLKTAGSADRIIIAG 169
>pdb|3GA7|A Chain A, 1.55 Angstrom Crystal Structure Of An Acetyl Esterase From
Salmonella Typhimurium
Length = 326
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 26 FFGTEKVSASMDSPNVVFSKDVVIVPEKD------PPLKQTKSSLFYYHGGGLFMGSPFC 79
++ E+ + D+P+ V P D P ++++L+Y HGGG +G+
Sbjct: 46 YYLLERRFWNADAPSXTTRTCAVPTPYGDVTTRLYSPQPTSQATLYYLHGGGFILGN--- 102
Query: 80 STYHNYIGSLSAK-ANVIVVSIDYRLAPEHLVAAAYEDSWAALKWVASH 127
H+ I L A+ V+ IDY L+P+ A E++ A + + H
Sbjct: 103 LDTHDRIXRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCSYFSQH 151
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 15/87 (17%)
Query: 59 QTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAP---EHLVA--AA 113
Q + + HGG ++G+ Y L+A+ VIVV+++YRL P HL + A
Sbjct: 95 QNLPVMVWIHGGAFYLGAGSEPLYDG--SKLAAQGEVIVVTLNYRLGPFGFMHLSSFDEA 152
Query: 114 YEDSW------AALKWVASHFKISAHG 134
Y D+ AALKWV + ISA G
Sbjct: 153 YSDNLGLLDQAAALKWVREN--ISAFG 177
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 13/74 (17%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYE-------- 115
+ + HGGGL +G STY +LSA NV+VV+I YRL + E
Sbjct: 114 MVWIHGGGLMVGG--ASTYDGL--ALSAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 169
Query: 116 -DSWAALKWVASHF 128
D AAL+WV +
Sbjct: 170 LDQVAALRWVQDNI 183
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 24/104 (23%)
Query: 42 VFSKDVVIVPEKDPPLKQTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSID 101
VF+ D P ++ P+ + + HGG ++G+ Y L+A+ VIVV+++
Sbjct: 87 VFAPDT---PSQNLPV------MVWIHGGAFYLGAGSEPLYDG--SKLAAQGEVIVVTLN 135
Query: 102 YRLAP---EHLVA--AAYEDSW------AALKWVASHFKISAHG 134
YRL P HL + AY D+ AALKWV + ISA G
Sbjct: 136 YRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVREN--ISAFG 177
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 12/69 (17%)
Query: 64 LFYYHGGGLFMGS-----PFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSW 118
L + HGGG +G+ PFC +G V +++YRLAPE D +
Sbjct: 82 LLWIHGGGFAIGTAESSDPFCVEVARELG-------FAVANVEYRLAPETTFPGPVNDCY 134
Query: 119 AALKWVASH 127
AAL ++ +H
Sbjct: 135 AALLYIHAH 143
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 12/69 (17%)
Query: 64 LFYYHGGGLFMGS-----PFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYEDSW 118
L + HGGG +G+ PFC +G V +++YRLAPE D +
Sbjct: 82 LLWIHGGGFAIGTAESSDPFCVEVARELG-------FAVANVEYRLAPETTFPGPVNDCY 134
Query: 119 AALKWVASH 127
AAL ++ +H
Sbjct: 135 AALLYIHAH 143
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYE-------- 115
+ + HGGGL +G+ STY +L+A NV+VV+I YRL + E
Sbjct: 113 MVWIHGGGLMVGA--ASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 168
Query: 116 -DSWAALKWVASHF 128
D AAL+WV +
Sbjct: 169 LDQVAALRWVQDNI 182
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYE-------- 115
+ + HGGGL +G+ STY +L+A NV+VV+I YRL + E
Sbjct: 118 MVWIHGGGLMVGA--ASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 173
Query: 116 -DSWAALKWVASHF 128
D AAL+WV +
Sbjct: 174 LDQVAALRWVQDNI 187
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYE-------- 115
+ + HGGGL +G+ STY +L+A NV+VV+I YRL + E
Sbjct: 118 MVWIHGGGLMVGA--ASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 173
Query: 116 -DSWAALKWVASHF 128
D AAL+WV +
Sbjct: 174 LDQVAALRWVQDNI 187
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 64 LFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLAPEHLVAAAYE-------- 115
+ + HGGGL +G+ STY +L+A NV+VV+I YRL + E
Sbjct: 116 MVWIHGGGLMVGA--ASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDEHSRGNWGH 171
Query: 116 -DSWAALKWVASHF 128
D AAL+WV +
Sbjct: 172 LDQVAALRWVQDNI 185
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 24/104 (23%)
Query: 42 VFSKDVVIVPEKDPPLKQTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSID 101
VF+ D P ++ P+ + + HGG ++G+ Y L+A+ VIVV+++
Sbjct: 87 VFAPDT---PSQNLPV------MVWIHGGAFYLGAGSEPLYDG--SKLAAQGEVIVVTLN 135
Query: 102 YRLAP---EHLVA--AAYEDSW------AALKWVASHFKISAHG 134
YRL P HL + AY D+ AALKWV + ISA G
Sbjct: 136 YRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVREN--ISAFG 177
>pdb|3H04|A Chain A, The Crystal Structure Of The Protein With Unknown Function
From Staphylococcus Aureus Subsp. Aureus Mu50
Length = 275
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 43 FSKDVVIVPEKDPPLKQTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDY 102
F+ I+ K+ P TK + Y HGGGL G YI L+ ++I +S Y
Sbjct: 14 FALPYTIIKAKNQP---TKGVIVYIHGGGLMFGKA-NDLSPQYIDILTEHYDLIQLS--Y 67
Query: 103 RLAPEHLVAAAYEDSWAALKWVASHF 128
RL PE + ED +A+ + S +
Sbjct: 68 RLLPEVSLDCIIEDVYASFDAIQSQY 93
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 48 VIVPEKDPPLKQTKSSLFYYHGGGLFMGSPFCSTY-HNYI---GSLSAKANVIVVSIDYR 103
+ VP+ + + + + +GG MGS + + +NY+ ++ + NVIVV+ +YR
Sbjct: 85 IWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYLYDGEEIATRGNVIVVTFNYR 144
Query: 104 LAP 106
+ P
Sbjct: 145 VGP 147
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 32.7 bits (73), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 50 VPEKDPPLKQTKSSLFYYHGGGLFMGSPFCSTY-HNYI---GSLSAKANVIVVSIDYRLA 105
VP+ + + + + +GG MGS + + +NY+ ++ + NVIVV+ +YR+
Sbjct: 87 VPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYLYDGEEIATRGNVIVVTFNYRVG 146
Query: 106 P 106
P
Sbjct: 147 P 147
>pdb|1JKM|B Chain B, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
pdb|1JKM|A Chain A, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
Length = 361
Score = 32.3 bits (72), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
Query: 63 SLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSIDYRLA----PEHLVAAAYEDSW 118
L Y HGGG+ + + + + L+A +V+V+ +D+R A H + ED
Sbjct: 111 GLVYTHGGGMTILTTDNRVHRRWCTDLAAAGSVVVM-VDFRNAWTAEGHHPFPSGVEDCL 169
Query: 119 AALKWVASH 127
AA+ WV H
Sbjct: 170 AAVLWVDEH 178
>pdb|2HEW|F Chain F, The X-Ray Crystal Structure Of Murine Ox40l
pdb|2HEY|F Chain F, Crystal Structure Of Murine Ox40l Bound To Human Ox40
pdb|2HEY|G Chain G, Crystal Structure Of Murine Ox40l Bound To Human Ox40
Length = 152
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 51 PEKDPPLKQTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAKANVIVVSID 101
P KDPP+++ + ++ G LF+ S+Y N ++ + N +V+ D
Sbjct: 8 PAKDPPIQRLRGAVTRCEDGQLFI-----SSYKNEYQTMEVQNNSVVIKCD 53
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 48 VIVPEKDPPLKQTKSSLFYYHGGGLFMGSP----FCSTYHNYIGSLSAKANVIVVSIDYR 103
+ VP+ + + + +GG MG+ F S Y ++ + NVIVV+ +YR
Sbjct: 85 IWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYR 144
Query: 104 LAP 106
+ P
Sbjct: 145 VGP 147
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 48 VIVPEKDPPLKQTKSSLFYYHGGGLFMGSP----FCSTYHNYIGSLSAKANVIVVSIDYR 103
+ VP+ + + + +GG MG+ F S Y ++ + NVIVV+ +YR
Sbjct: 85 IWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYR 144
Query: 104 LAP 106
+ P
Sbjct: 145 VGP 147
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 30.8 bits (68), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 64 LFYYHGGGLFMGSP----FCSTYHNYIGSLSAKANVIVVSIDYRLAP 106
+ + +GG MG+ F S Y ++ + NVIVV+ +YR+ P
Sbjct: 101 MIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGP 147
>pdb|3BL8|A Chain A, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|B Chain B, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|C Chain C, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
pdb|3BL8|D Chain D, Crystal Structure Of The Extracellular Domain Of
Neuroligin 2a From Mouse
Length = 580
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 15/88 (17%)
Query: 51 PEKDPPLKQTKSSLFYYHGGGLFMGSPFCSTYHNYIGS-LSAKANVIVVSIDYRLAPEHL 109
P+ D K + + HGG G T + + GS L+A NVIVV+++YRL
Sbjct: 128 PDTDIRDSGKKPVMLFLHGGSYMEG-----TGNMFDGSVLAAYGNVIVVTLNYRLGVLGF 182
Query: 110 VAAAYE---------DSWAALKWVASHF 128
++ + D AL+W++ +
Sbjct: 183 LSTGDQAAKGNYGLLDQIQALRWLSENI 210
>pdb|2OGT|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.8
Length = 498
Score = 30.0 bits (66), Expect = 0.55, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Query: 59 QTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAK-ANVIVVSIDYRL---APEHL---VA 111
+ + LF+ HGG GS + Y G+ AK +V+VV+I+YR+ HL
Sbjct: 97 KKRPVLFWIHGGAFLFGS---GSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFG 153
Query: 112 AAYE--------DSWAALKWVASHFKISAHG 134
AY D AAL+WV + I+A G
Sbjct: 154 EAYAQAGNLGILDQVAALRWVKEN--IAAFG 182
>pdb|2OGS|A Chain A, Crystal Structure Of The Geobacillus Stearothermophilus
Carboxylesterase Est55 At Ph 6.2
Length = 498
Score = 30.0 bits (66), Expect = 0.59, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Query: 59 QTKSSLFYYHGGGLFMGSPFCSTYHNYIGSLSAK-ANVIVVSIDYRL---APEHL---VA 111
+ + LF+ HGG GS + Y G+ AK +V+VV+I+YR+ HL
Sbjct: 97 KKRPVLFWIHGGAFLFGS---GSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFG 153
Query: 112 AAYE--------DSWAALKWVASHFKISAHG 134
AY D AAL+WV + I+A G
Sbjct: 154 EAYAQAGNLGILDQVAALRWVKEN--IAAFG 182
>pdb|3VKF|A Chain A, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
pdb|3VKF|B Chain B, Crystal Structure Of Neurexin 1betaNEUROLIGIN 1 COMPLEX
Length = 585
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 61 KSSLFYYHGGGLFMGSPFCSTYHNYIGS-LSAKANVIVVSIDYRLA 105
K + Y HGG G T + Y GS L++ NVIV++++YRL
Sbjct: 149 KPVMVYIHGGSYMEG-----TGNLYDGSVLASYGNVIVITVNYRLG 189
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 29.3 bits (64), Expect = 0.85, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 61 KSSLFYYHGGGLFMGSPFCSTYHNYIGS-LSAKANVIVVSIDYRLA 105
K + Y HGG G T + Y GS L++ NVIV++++YRL
Sbjct: 131 KPVMVYIHGGSYMEG-----TGNLYDGSVLASYGNVIVITVNYRLG 171
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 29.3 bits (64), Expect = 0.88, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 6/46 (13%)
Query: 61 KSSLFYYHGGGLFMGSPFCSTYHNYIGS-LSAKANVIVVSIDYRLA 105
K + Y HGG G T + Y GS L++ NVIV++++YRL
Sbjct: 144 KPVMVYIHGGSYMEG-----TGNLYDGSVLASYGNVIVITVNYRLG 184
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 28.5 bits (62), Expect = 1.5, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 10/62 (16%)
Query: 48 VIVPEKDPPLKQT--KSSLFYYHGGGLFMGSPFCSTYHNYI-GS-LSAKANVIVVSIDYR 103
+ VP +D Q K + Y HGG G+ N I GS L++ NVIV++I+YR
Sbjct: 120 IYVPTEDDIHDQNSKKPVMVYIHGGSYMEGT------GNMIDGSILASYGNVIVITINYR 173
Query: 104 LA 105
L
Sbjct: 174 LG 175
>pdb|3MWE|A Chain A, Truncated Human Atp-Citrate Lyase With Tartrate Bound
Length = 425
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 86 IGSLSAKANVIVVSIDYRLAPE----HLVAAAYEDSWAAL-KWVASHFKISAHGYETWLN 140
+G + AKA ++V +D +L PE HL+ A ED L +++ F Y T+L
Sbjct: 142 VGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEILASFISGLFNFYEDLYFTYLE 201
>pdb|1VKH|A Chain A, Crystal Structure Of A Putative Serine Hydrolase (Ydr428c)
From Saccharomyces Cerevisiae At 1.85 A Resolution
pdb|1VKH|B Chain B, Crystal Structure Of A Putative Serine Hydrolase (Ydr428c)
From Saccharomyces Cerevisiae At 1.85 A Resolution
Length = 273
Score = 28.1 bits (61), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 58 KQTKSSLFYYHGGGLFMGSPFCSTYH---NYIGSLSAKANVIVVSIDYRLAPE 107
+ T+ ++ Y HGG + ++ N I S ++ V SI+YRL+PE
Sbjct: 38 QNTREAVIYIHGGAWNDPENTPNDFNQLANTIKSXDTESTVCQYSIEYRLSPE 90
>pdb|3MWD|A Chain A, Truncated Human Atp-Citrate Lyase With Citrate Bound
Length = 425
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 86 IGSLSAKANVIVVSIDYRLAPE----HLVAAAYEDSWAAL 121
+G + AKA ++V +D +L PE HL+ A ED L
Sbjct: 142 VGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEIL 181
>pdb|3PFF|A Chain A, Truncated Human Atp-Citrate Lyase With Adp And Tartrate
Bound
Length = 829
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Query: 86 IGSLSAKANVIVVSIDYRLAPE----HLVAAAYEDSWAAL 121
+G + AKA ++V +D +L PE HL+ A ED L
Sbjct: 142 VGDVDAKAQKLLVGVDEKLNPEDIKKHLLVHAPEDKKEIL 181
>pdb|2I6D|A Chain A, The Structure Of A Putative Rna Methyltransferase Of The
Trmh Family From Porphyromonas Gingivalis
Length = 257
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 8/104 (7%)
Query: 33 SASMDSPNVVFSKDVVIVPEKDPPLKQTKSSLFYYHGGGLFMGSPFC---STYHNYIGSL 89
SA + SP VV + + + PLK T +L Y+ G+ + F S Y + +
Sbjct: 138 SADVFSPKVVQASXGALARVQPTPLKNTVDTLAYFRRQGIPVYGAFLDGQSLYEAPLPNF 197
Query: 90 SAKANVIVVSIDYRLAPEHLVAAAYEDSWAALKWVASHFKISAH 133
+ A +++ S ++PE VAA D L AS + H
Sbjct: 198 TEPAILVLGSEGRGISPE--VAAEITDR---LTIPASGLSVKGH 236
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.134 0.425
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,267,251
Number of Sequences: 62578
Number of extensions: 212004
Number of successful extensions: 431
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 387
Number of HSP's gapped (non-prelim): 55
length of query: 151
length of database: 14,973,337
effective HSP length: 90
effective length of query: 61
effective length of database: 9,341,317
effective search space: 569820337
effective search space used: 569820337
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)