Your job contains 1 sequence.
>042417
VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG
IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV
SLGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKV
PSQVKTSNVRFNNIRGTSANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLF
GKQIPATCV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 042417
(249 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6H9K0 - symbol:plaa2 "Exopolygalacturonase" sp... 261 1.3e-56 3
TAIR|locus:2164773 - symbol:AT5G48140 species:3702 "Arabi... 286 5.4e-54 3
TAIR|locus:2088252 - symbol:AT3G14040 species:3702 "Arabi... 249 1.2e-51 3
TAIR|locus:2077437 - symbol:AT3G07840 species:3702 "Arabi... 292 1.3e-49 2
TAIR|locus:2077402 - symbol:AT3G07820 species:3702 "Arabi... 279 2.3e-46 2
TAIR|locus:2077412 - symbol:AT3G07830 species:3702 "Arabi... 261 1.6e-45 2
TAIR|locus:2077442 - symbol:AT3G07850 species:3702 "Arabi... 251 7.1e-43 2
TAIR|locus:2063114 - symbol:AT2G40310 species:3702 "Arabi... 223 1.5e-37 3
TAIR|locus:2047153 - symbol:AT2G15470 species:3702 "Arabi... 210 1.5e-37 3
TAIR|locus:2119485 - symbol:AT4G13760 species:3702 "Arabi... 214 2.0e-37 3
TAIR|locus:2047218 - symbol:AT2G15460 species:3702 "Arabi... 214 2.5e-37 3
TAIR|locus:2066251 - symbol:AT2G26620 species:3702 "Arabi... 216 3.8e-37 3
TAIR|locus:2030803 - symbol:AT1G43100 species:3702 "Arabi... 218 1.5e-36 3
TAIR|locus:2030791 - symbol:AT1G43090 species:3702 "Arabi... 218 6.3e-36 3
TAIR|locus:2016314 - symbol:AT1G80170 species:3702 "Arabi... 191 4.8e-33 3
TAIR|locus:2051764 - symbol:AT2G43890 species:3702 "Arabi... 214 3.8e-31 2
TAIR|locus:2093212 - symbol:AT3G15720 species:3702 "Arabi... 201 4.3e-31 3
TAIR|locus:2043894 - symbol:AT2G43880 species:3702 "Arabi... 220 1.1e-30 2
TAIR|locus:2024680 - symbol:PGA4 "polygalacturonase 4" sp... 245 1.1e-29 2
TAIR|locus:2043974 - symbol:AT2G43860 species:3702 "Arabi... 217 9.8e-29 3
TAIR|locus:2032125 - symbol:AT1G78400 species:3702 "Arabi... 229 7.3e-28 2
TAIR|locus:2034131 - symbol:AT1G65570 species:3702 "Arabi... 228 8.2e-28 2
TAIR|locus:2020352 - symbol:AT1G17150 species:3702 "Arabi... 219 3.1e-27 2
TAIR|locus:2046555 - symbol:AT2G33160 species:3702 "Arabi... 218 2.9e-26 2
TAIR|locus:2030797 - symbol:AT1G43080 species:3702 "Arabi... 218 5.1e-25 2
TAIR|locus:2155292 - symbol:AT5G44840 species:3702 "Arabi... 206 1.9e-24 2
TAIR|locus:2047223 - symbol:AT2G15450 species:3702 "Arabi... 214 4.9e-24 2
TAIR|locus:2127836 - symbol:AT4G32380 species:3702 "Arabi... 201 2.8e-23 2
TAIR|locus:2167185 - symbol:AT5G17200 species:3702 "Arabi... 195 5.0e-23 2
TAIR|locus:2178052 - symbol:AT5G39910 species:3702 "Arabi... 177 1.2e-22 2
TAIR|locus:2023817 - symbol:AT1G48100 species:3702 "Arabi... 184 8.9e-22 2
TAIR|locus:2077407 - symbol:QRT2 "QUARTET 2" species:3702... 185 2.7e-21 2
TAIR|locus:2146370 - symbol:AT5G27530 species:3702 "Arabi... 182 3.1e-21 2
TAIR|locus:2043924 - symbol:AT2G43870 species:3702 "Arabi... 249 4.2e-21 1
TAIR|locus:2026795 - symbol:AT1G70500 species:3702 "Arabi... 146 5.9e-21 3
TAIR|locus:2080422 - symbol:AT3G59850 species:3702 "Arabi... 247 7.9e-21 1
TAIR|locus:2141877 - symbol:AT4G18180 species:3702 "Arabi... 241 8.6e-21 2
TAIR|locus:2222657 - symbol:AT5G14650 species:3702 "Arabi... 181 1.1e-20 2
TAIR|locus:2028844 - symbol:AT1G23460 species:3702 "Arabi... 125 1.6e-20 3
TAIR|locus:2128023 - symbol:AT4G35670 species:3702 "Arabi... 176 8.2e-20 2
TAIR|locus:2036581 - symbol:AT1G60590 species:3702 "Arabi... 172 1.6e-19 2
TAIR|locus:2031953 - symbol:AT1G05650 species:3702 "Arabi... 232 4.5e-19 1
TAIR|locus:2088842 - symbol:AT3G26610 species:3702 "Arabi... 177 4.8e-19 2
TAIR|locus:2031963 - symbol:AT1G05660 species:3702 "Arabi... 231 5.9e-19 1
TAIR|locus:2019963 - symbol:AT1G10640 species:3702 "Arabi... 158 1.6e-17 2
TAIR|locus:2016239 - symbol:AT1G80140 species:3702 "Arabi... 210 6.3e-17 1
TAIR|locus:2156314 - symbol:AT5G44830 species:3702 "Arabi... 195 3.2e-15 1
TAIR|locus:2054396 - symbol:PGAZAT "polygalacturonase abs... 196 6.3e-15 1
TAIR|locus:504955462 - symbol:AT4G32375 species:3702 "Ara... 191 2.9e-14 1
TAIR|locus:2103478 - symbol:ADPG1 species:3702 "Arabidops... 181 8.1e-13 1
TAIR|locus:2196055 - symbol:AT1G02460 species:3702 "Arabi... 177 8.8e-12 1
TAIR|locus:2141345 - symbol:AT4G01890 species:3702 "Arabi... 171 6.7e-11 1
TAIR|locus:2027534 - symbol:AT1G56710 species:3702 "Arabi... 168 1.5e-10 1
TAIR|locus:2078531 - symbol:AT3G42950 species:3702 "Arabi... 106 7.6e-09 2
TAIR|locus:2127821 - symbol:AT4G32370 species:3702 "Arabi... 151 1.3e-08 1
TAIR|locus:2061396 - symbol:AT2G23900 species:3702 "Arabi... 116 2.1e-08 2
TAIR|locus:2152980 - symbol:AT5G41870 species:3702 "Arabi... 107 1.3e-07 2
TAIR|locus:2128524 - symbol:AT4G23820 species:3702 "Arabi... 112 1.3e-07 2
TAIR|locus:2119156 - symbol:AT4G33440 species:3702 "Arabi... 110 1.7e-07 2
TAIR|locus:2098038 - symbol:AT3G62110 species:3702 "Arabi... 109 5.7e-07 2
UNIPROTKB|A1CIV8 - symbol:pgaI "Probable endopolygalactur... 128 8.8e-06 1
UNIPROTKB|Q0CMU3 - symbol:pgaI "Probable endopolygalactur... 128 8.8e-06 1
TAIR|locus:2076591 - symbol:AT3G57790 species:3702 "Arabi... 98 9.6e-06 2
SGD|S000003914 - symbol:PGU1 "Endo-polygalacturonase" spe... 124 2.5e-05 1
UNIPROTKB|B0YDE8 - symbol:pgaX "Probable exopolygalacturo... 91 4.3e-05 2
UNIPROTKB|Q4WCZ8 - symbol:pgaX "Probable exopolygalacturo... 91 4.3e-05 2
UNIPROTKB|A1DAX2 - symbol:pgxB "Probable exopolygalacturo... 103 8.8e-05 2
UNIPROTKB|A1DLC1 - symbol:pgaX "Probable exopolygalacturo... 87 0.00013 2
UNIPROTKB|Q9KTH3 - symbol:VC0929 "Putative uncharacterize... 118 0.00015 1
TIGR_CMR|VC_0929 - symbol:VC_0929 "hypothetical protein" ... 118 0.00015 1
UNIPROTKB|B8NG16 - symbol:pgaX "Probable exopolygalacturo... 83 0.00036 2
UNIPROTKB|B8NK45 - symbol:rhgA "Probable rhamnogalacturon... 85 0.00041 2
UNIPROTKB|Q2U293 - symbol:rhgA "Probable rhamnogalacturon... 85 0.00041 2
TAIR|locus:2202170 - symbol:AT1G19170 species:3702 "Arabi... 114 0.00047 2
UNIPROTKB|B0Y4Z4 - symbol:pgaA "Probable endopolygalactur... 113 0.00048 1
UNIPROTKB|Q4WQT2 - symbol:pgaA "Probable endopolygalactur... 113 0.00048 1
ASPGD|ASPL0000031573 - symbol:pgaC species:162425 "Emeric... 112 0.00066 1
UNIPROTKB|Q5ATQ3 - symbol:AN8327 "Endopolygalacturonase A... 112 0.00066 1
UNIPROTKB|B0YAA4 - symbol:pgxB "Probable exopolygalacturo... 98 0.00067 2
UNIPROTKB|Q4WBK6 - symbol:pgxB "Probable exopolygalacturo... 98 0.00067 2
UNIPROTKB|A1CVV8 - symbol:pgaA "Probable endopolygalactur... 111 0.00081 1
UNIPROTKB|A2QAH3 - symbol:pgaI "Probable endopolygalactur... 111 0.00081 1
UNIPROTKB|B0XPA1 - symbol:AFUB_016610 "Probable endopolyg... 111 0.00085 1
UNIPROTKB|Q4WR80 - symbol:AFUA_1G17220 "Probable endopoly... 111 0.00085 1
ASPGD|ASPL0000073575 - symbol:pgxA species:162425 "Emeric... 80 0.00099 2
UNIPROTKB|Q5ASG9 - symbol:pgaX-1 "Exopolygalacturonase X-... 80 0.00099 2
>UNIPROTKB|Q6H9K0 [details] [associations]
symbol:plaa2 "Exopolygalacturonase" species:140101
"Platanus x acerifolia" [GO:0005575 "cellular_component"
evidence=ND] [GO:0019863 "IgE binding" evidence=IDA] [GO:0045490
"pectin catabolic process" evidence=IDA] [GO:0047911 "galacturan
1,4-alpha-galacturonidase activity" evidence=IDA]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 GO:GO:0045490 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0019863
GO:GO:0047911 EMBL:AJ586898 ProteinModelPortal:Q6H9K0
Allergome:3426 Allergome:573 Uniprot:Q6H9K0
Length = 377
Score = 261 (96.9 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 53/124 (42%), Positives = 81/124 (65%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF+FL + + I S++S+ FHIN+L C ++ + +TA S NT+GIH+G S G
Sbjct: 129 MNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKG 188
Query: 106 SEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT 149
I+++ IATGDDC+S+G HGIS+GSLG+ N++EV G+TV+ CT
Sbjct: 189 VTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCT 248
Query: 150 FTGT 153
F+GT
Sbjct: 249 FSGT 252
Score = 259 (96.2 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 52/106 (49%), Positives = 67/106 (63%)
Query: 151 TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI-------- 202
T ++ NNV+NP+++DQ YCPY +C+ + PS++K SN+ FNNIRGTS K+
Sbjct: 273 TFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKLSNINFNNIRGTSTGKVAVVIACSH 332
Query: 203 --PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA 246
PC N+ IG IN Y G GP TS CSNVKPT GKQ+PA
Sbjct: 333 GMPCSNMKIGEINLSYRGAG----GP-ATSTCSNVKPTFSGKQVPA 373
Score = 92 (37.4 bits), Expect = 1.3e-56, Sum P(3) = 1.3e-56
Identities = 22/45 (48%), Positives = 26/45 (57%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV D+GA G D S+A AW+ AC G S VL+P G Y
Sbjct: 9 VFNVNDYGAKGAG--DISQAVMKAWKAACASQG-PSTVLIPKGNY 50
>TAIR|locus:2164773 [details] [associations]
symbol:AT5G48140 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009827
"plant-type cell wall modification" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB023039
EMBL:BT009687 EMBL:AK118684 IPI:IPI00543467 RefSeq:NP_199625.1
UniGene:At.7075 ProteinModelPortal:Q9LUB8 SMR:Q9LUB8 PaxDb:Q9LUB8
PRIDE:Q9LUB8 EnsemblPlants:AT5G48140.1 GeneID:834866
KEGG:ath:AT5G48140 TAIR:At5g48140 InParanoid:Q9LUB8 OMA:RYSHEEN
PhylomeDB:Q9LUB8 ProtClustDB:CLSN2684940 Genevestigator:Q9LUB8
Uniprot:Q9LUB8
Length = 395
Score = 286 (105.7 bits), Expect = 5.4e-54, Sum P(3) = 5.4e-54
Identities = 58/125 (46%), Positives = 85/125 (68%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ D+ I GI S+D+++FHIN++G N+ D+KI A A+SPNT+GIH+G S+G
Sbjct: 139 ISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDG 198
Query: 106 SEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT 149
+I +S I+TGDDCVS+G HGIS+GSLG+ ++E V G+ + NCT
Sbjct: 199 IKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCT 258
Query: 150 FTGTN 154
T+
Sbjct: 259 LQETD 263
Score = 242 (90.2 bits), Expect = 5.4e-54, Sum P(3) = 5.4e-54
Identities = 53/116 (45%), Positives = 67/116 (57%)
Query: 148 CTFTGT-----NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK- 201
CT T + NI+ NV NPI+IDQ YCP+N+CN + PS +K +N+ F IRGTS NK
Sbjct: 276 CTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIKLANISFKKIRGTSGNKD 335
Query: 202 ---------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
PCQN+ +G++N Y G +GP T CSNV P L G QIP C
Sbjct: 336 AVKLLCSKGYPCQNVEVGDVNIQYTGA----DGPATFQ-CSNVSPKLVGTQIPKAC 386
Score = 59 (25.8 bits), Expect = 5.4e-54, Sum P(3) = 5.4e-54
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
N K F + D + A A+ EAC + KS V++P G+Y
Sbjct: 22 NAKIFNINSPPGSDITNALLKAFNEACQFP-TKSTVMIPKGEY 63
Score = 36 (17.7 bits), Expect = 3.4e-22, Sum P(2) = 3.4e-22
Identities = 9/29 (31%), Positives = 18/29 (62%)
Query: 92 SPNTEGIHIGSSNGSEISHSVI-ATGDDC 119
S N + +I S GS+I+++++ A + C
Sbjct: 20 SANAKIFNINSPPGSDITNALLKAFNEAC 48
>TAIR|locus:2088252 [details] [associations]
symbol:AT3G14040 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB019229
UniGene:At.22234 ProtClustDB:CLSN2684911 IPI:IPI00524959
RefSeq:NP_188020.1 UniGene:At.48657 ProteinModelPortal:Q9LVJ4
SMR:Q9LVJ4 STRING:Q9LVJ4 PRIDE:Q9LVJ4 EnsemblPlants:AT3G14040.1
GeneID:820618 KEGG:ath:AT3G14040 TAIR:At3g14040 InParanoid:Q9LVJ4
OMA:NICSASG PhylomeDB:Q9LVJ4 Genevestigator:Q9LVJ4 Uniprot:Q9LVJ4
Length = 445
Score = 249 (92.7 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 56/125 (44%), Positives = 75/125 (60%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L D+ I A +S NT+GIHIG SNG
Sbjct: 191 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNG 250
Query: 106 SEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+G HGIS+GSLG+ N++ V G+TVR C
Sbjct: 251 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 310
Query: 150 FTGTN 154
T+
Sbjct: 311 IKNTD 315
Score = 230 (86.0 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 50/105 (47%), Positives = 63/105 (60%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------P 203
+I +NV P++IDQ YCPY C VPS+VK S+V NI+GTSA K+ P
Sbjct: 338 DITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKLSDVTIKNIKGTSATKVAVKLMCSKGVP 397
Query: 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
C NI + +IN V+NG EGP S CSN+KP L GK +PA C
Sbjct: 398 CTNIALSDINLVHNGK----EGP-AVSACSNIKPILSGKLVPAAC 437
Score = 100 (40.3 bits), Expect = 1.2e-51, Sum P(3) = 1.2e-51
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRF 50
+VK GA DG DDS AF AW+EAC S + VP G+YL S+ F
Sbjct: 72 DVKASGAKGDGKTDDSAAFAAAWKEAC---AAGSTITVPKGEYLVESLEF 118
>TAIR|locus:2077437 [details] [associations]
symbol:AT3G07840 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009827
"plant-type cell wall modification" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483 ProtClustDB:CLSN2684940
IPI:IPI00522605 RefSeq:NP_187441.1 UniGene:At.53217
ProteinModelPortal:Q9SFD0 PRIDE:Q9SFD0 EnsemblPlants:AT3G07840.1
GeneID:819975 KEGG:ath:AT3G07840 TAIR:At3g07840 InParanoid:Q9SFD0
OMA:GIASEMH PhylomeDB:Q9SFD0 ArrayExpress:Q9SFD0
Genevestigator:Q9SFD0 Uniprot:Q9SFD0
Length = 401
Score = 292 (107.8 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 58/125 (46%), Positives = 87/125 (69%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ ++ I I S+D++ FHIN+LG N+ +++K+ A A+SPNT+GIH+G S G
Sbjct: 140 ISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEG 199
Query: 106 SEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT 149
+I +S IATGDDC+S+G HGISVGSLG+ +++++V G+TV NCT
Sbjct: 200 VKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCT 259
Query: 150 FTGTN 154
GT+
Sbjct: 260 LQGTD 264
Score = 242 (90.2 bits), Expect = 1.3e-49, Sum P(2) = 1.3e-49
Identities = 52/105 (49%), Positives = 63/105 (60%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------P 203
NI+ NNV NPI+IDQ YCP+N+CN + PS +K ++ F NIRGTS NK P
Sbjct: 288 NIILNNVSNPILIDQEYCPWNQCNKQKPSTIKLVDISFKNIRGTSGNKDAVKLLCSKAHP 347
Query: 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
C N+ IGNIN Y G +GP T +CSNV P L G Q P C
Sbjct: 348 CANVEIGNINLEYKGA----DGPPTF-MCSNVSPKLVGTQNPKAC 387
Score = 44 (20.5 bits), Expect = 5.9e-23, Sum P(2) = 5.9e-23
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 92 SPNTEGIHIGSSNGSEISHSVI 113
S N E ++G S GS+I+ +++
Sbjct: 20 SANAEVFNVGGSPGSDITQALL 41
>TAIR|locus:2077402 [details] [associations]
symbol:AT3G07820 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GO:GO:0005576 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483
ProtClustDB:CLSN2684940 UniGene:At.53217 EMBL:AY065239
EMBL:AY096534 EMBL:AY087578 IPI:IPI00529385 RefSeq:NP_187439.1
UniGene:At.3 ProteinModelPortal:Q9SFD2 SMR:Q9SFD2 STRING:Q9SFD2
PRIDE:Q9SFD2 EnsemblPlants:AT3G07820.1 GeneID:819973
KEGG:ath:AT3G07820 TAIR:At3g07820 InParanoid:Q9SFD2 OMA:ANAEVFT
PhylomeDB:Q9SFD2 ArrayExpress:Q9SFD2 Genevestigator:Q9SFD2
Uniprot:Q9SFD2
Length = 391
Score = 279 (103.3 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 70/169 (41%), Positives = 101/169 (59%)
Query: 7 FGAVADGIK-DDSKAFE----TAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
FG + DG K + AF+ AWR N +P +SIRF+F+ +S I I
Sbjct: 101 FGNI-DGFKLNGGGAFDGEGNAAWR-VNNCHKTFECKKLP----ISIRFDFILNSEIRDI 154
Query: 62 KSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
S+D++ FHIN+LG N+ +N++KI A DSPNT+GIH+G S+G +I +S I+TGDDC+S
Sbjct: 155 SSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGVKILNSFISTGDDCIS 214
Query: 122 LG----------------HGISVGSLGKGINDEEVVGLTVRNCTFTGTN 154
+G HGISVGSLG+ ++++V G+ V NCT T+
Sbjct: 215 VGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTLQETD 263
Score = 224 (83.9 bits), Expect = 2.3e-46, Sum P(2) = 2.3e-46
Identities = 48/105 (45%), Positives = 62/105 (59%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IP 203
+I+ +V NPI+IDQ YCP+N+CN + S +K N+ F NIRGTS NK P
Sbjct: 287 DIILKDVSNPILIDQEYCPWNQCNKQKASTIKLVNISFKNIRGTSGNKDAVKLLCSKGYP 346
Query: 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
CQN+ IG+I+ YNG +GP T CSNV P + G Q P C
Sbjct: 347 CQNVEIGDIDIKYNGA----DGPATFH-CSNVSPKILGSQSPKAC 386
Score = 49 (22.3 bits), Expect = 1.9e-21, Sum P(2) = 1.9e-21
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 92 SPNTEGIHIGSSNGSEISHSVI 113
S N E IGSS+GS+I+ +++
Sbjct: 19 SANAEVFTIGSSSGSDITQALL 40
>TAIR|locus:2077412 [details] [associations]
symbol:AT3G07830 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0009827 "plant-type cell
wall modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483 ProtClustDB:CLSN2684940
IPI:IPI00535795 RefSeq:NP_187440.1 UniGene:At.40295
ProteinModelPortal:Q9SFD1 PRIDE:Q9SFD1 EnsemblPlants:AT3G07830.1
GeneID:819974 KEGG:ath:AT3G07830 TAIR:At3g07830 InParanoid:Q9SFD1
OMA:NIHFENI PhylomeDB:Q9SFD1 Genevestigator:Q9SFD1 Uniprot:Q9SFD1
Length = 397
Score = 261 (96.9 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 56/125 (44%), Positives = 83/125 (66%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ ++ I I S+D++ FHIN++G N+ +++KI A A+SPNT+GIH+G S G
Sbjct: 140 ISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVG 199
Query: 106 SEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT 149
I +S I+TGDDCVS+G HGISVGSLG+ ++++V G+ V NCT
Sbjct: 200 VSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCT 259
Query: 150 FTGTN 154
T+
Sbjct: 260 LQETD 264
Score = 236 (88.1 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 51/115 (44%), Positives = 66/115 (57%)
Query: 144 TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK-- 201
T N F NI+ NV NPI+IDQ YCP+N+CN + S +K +N+ F IRGTS NK
Sbjct: 280 TASNIHFE--NIILRNVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDA 337
Query: 202 --------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
PC+N+ +G+IN Y G +GP T +CSNV+P L G Q P C
Sbjct: 338 VKLLCSKGYPCENVQVGDINIQYTGA----DGP-ATFMCSNVRPKLVGTQFPKAC 387
>TAIR|locus:2077442 [details] [associations]
symbol:AT3G07850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483
KO:K01213 GO:GO:0047911 EMBL:X72292 EMBL:AY056173 EMBL:AY091200
IPI:IPI00544320 PIR:S34200 RefSeq:NP_187442.1 UniGene:At.22234
ProteinModelPortal:P49063 SMR:P49063 STRING:P49063 PaxDb:P49063
PRIDE:P49063 ProMEX:P49063 EnsemblPlants:AT3G07850.1 GeneID:819976
KEGG:ath:AT3G07850 GeneFarm:575 TAIR:At3g07850 InParanoid:P49063
OMA:AIAIRIN PhylomeDB:P49063 ProtClustDB:CLSN2684911
Genevestigator:P49063 GermOnline:AT3G07850 Uniprot:P49063
Length = 444
Score = 251 (93.4 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 68/171 (39%), Positives = 96/171 (56%)
Query: 6 DFGAVADGIKDDSKA-FE----TAWR-EACNWDGIKSAVLVPPGKYLSIRFNFLNDSTIT 59
DF +AD + +KA F+ AW+ C G +++ P ++IRF L +S I
Sbjct: 150 DFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSL---P---INIRFTGLTNSKIN 203
Query: 60 GIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDC 119
I S +S+ FH+NIL C N+ L+D+ I A +S NT+GIHIG SNG + + I TGDDC
Sbjct: 204 SITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDC 263
Query: 120 VSLG----------------HGISVGSLGKGINDEEVVGLTVRNCTFTGTN 154
VS+G HGIS+GSLG+ N++ V G+TVR C T+
Sbjct: 264 VSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTD 314
Score = 228 (85.3 bits), Expect = 7.1e-43, Sum P(2) = 7.1e-43
Identities = 50/105 (47%), Positives = 62/105 (59%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------P 203
+I +NV P++IDQ YCPY C VPSQVK S+V I+GTSA K+ P
Sbjct: 337 DITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVP 396
Query: 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
C NI + +IN V+NG EGP S CSN+KP L GK +PA C
Sbjct: 397 CTNIALSDINLVHNGK----EGP-AVSACSNIKPILSGKLVPAAC 436
Score = 92 (37.4 bits), Expect = 5.6e-26, Sum P(2) = 5.6e-26
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRF 50
+VK GA D DDS AF AW+EAC S + VP G+Y+ S+ F
Sbjct: 71 DVKASGAKGDSKTDDSAAFAAAWKEAC---AAGSTITVPKGEYMVESLEF 117
Score = 37 (18.1 bits), Expect = 7.3e-23, Sum P(2) = 7.3e-23
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 142 GLTVRNCTFTGTNIVTNNVENPIV 165
G+ N + N+V N E P V
Sbjct: 394 GVPCTNIALSDINLVHNGKEGPAV 417
>TAIR|locus:2063114 [details] [associations]
symbol:AT2G40310 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 EMBL:AF085279
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC007020
ProtClustDB:CLSN2679499 IPI:IPI00533646 PIR:H84827
RefSeq:NP_181560.1 UniGene:At.53084 ProteinModelPortal:Q9S761
SMR:Q9S761 EnsemblPlants:AT2G40310.1 GeneID:818623
KEGG:ath:AT2G40310 TAIR:At2g40310 InParanoid:Q9S761 OMA:CHESGAM
PhylomeDB:Q9S761 ArrayExpress:Q9S761 Genevestigator:Q9S761
Uniprot:Q9S761
Length = 404
Score = 223 (83.6 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 50/129 (38%), Positives = 76/129 (58%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITASGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNMHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKNLTV 267
Query: 146 RNCTFTGTN 154
R+ F GT+
Sbjct: 268 RDVIFNGTS 276
Score = 145 (56.1 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 39/112 (34%), Positives = 57/112 (50%)
Query: 150 FTGTNIVTNNVENPIVIDQLYCPYNKCNI--KVPSQVKTSNVRFNNIRGTSANKI----- 202
F NI +V PI IDQ YCP+ C K S V+ +++ NI GTS NK+
Sbjct: 296 FVYENIQMIDVGKPINIDQKYCPHPPCEHEQKGESHVQIQDLKLKNIYGTSKNKVAMNLQ 355
Query: 203 -----PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC+NI + +IN NG+ E + ++C NV ++ GK +P C+
Sbjct: 356 CSKSFPCKNIELIDINIKSNGL----ENSSSIAVCENVDGSMSGKMVPQHCL 403
Score = 75 (31.5 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
FNV+ G+ DG D++ F + W AC S + VP G
Sbjct: 31 FNVQRHGSKPDGKTDNANVFTSIWSRACKRKSGSSKIYVPKG 72
Score = 47 (21.6 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 25/115 (21%), Positives = 51/115 (44%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILG-CY-NLKLNDLKITAHADSPNTEGIHIGSSNG 105
I F ++N+ +I+G ++D + L C+ NL L +T N I +S
Sbjct: 112 INFRYINNLSISGSGTLDGQGKQSWPLNDCHKNLNCPKLAMTMGFAFVNNSNIKDITSLN 171
Query: 106 SEISH-SVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNN 159
S++ H + + ++ G+++ + G N + + + N + TNI T +
Sbjct: 172 SKMGHFNFFSVHHFNIT---GVTITASGDSPNTDGIKMGSCSNMHISNTNIGTGD 223
>TAIR|locus:2047153 [details] [associations]
symbol:AT2G15470 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00537081 RefSeq:NP_179149.2
UniGene:At.52751 ProteinModelPortal:F4IIG2 SMR:F4IIG2
EnsemblPlants:AT2G15470.1 GeneID:816039 KEGG:ath:AT2G15470
OMA:STNIHIT ArrayExpress:F4IIG2 Uniprot:F4IIG2
Length = 404
Score = 210 (79.0 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 48/129 (37%), Positives = 74/129 (57%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + +IS + I TGDDC+++ GHGISVGSLGK ++++ L V
Sbjct: 208 SCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDAKDLIV 267
Query: 146 RNCTFTGTN 154
R+ F GT+
Sbjct: 268 RDVIFNGTS 276
Score = 149 (57.5 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 42/112 (37%), Positives = 56/112 (50%)
Query: 150 FTGTNIVTNNVENPIVIDQLYCPYNKCNI--KVPSQVKTSNVRFNNIRGTSANKI----- 202
F NI +V PI IDQ YCP+ C K S V+ N++ NI GTS NK+
Sbjct: 296 FVYENIQMIDVGKPINIDQKYCPHPPCEHERKGESHVQIQNLKLKNIYGTSKNKVAMNLQ 355
Query: 203 -----PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC+N+ + +IN NGV +G +TS+C NV GK P C+
Sbjct: 356 CSKIFPCKNVELIDINIKQNGVK---DG-SSTSVCENVDGFARGKMFPQHCL 403
Score = 86 (35.3 bits), Expect = 1.5e-37, Sum P(3) = 1.5e-37
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ GA DG D++ AF + W AC S + VP G +
Sbjct: 30 VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTF 74
Score = 37 (18.1 bits), Expect = 3.7e-14, Sum P(3) = 3.7e-14
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 48 IRFNFLNDSTITGIKSVDSR 67
I F ++N+ +I+G ++D +
Sbjct: 112 INFRYINNLSISGSGTLDGQ 131
>TAIR|locus:2119485 [details] [associations]
symbol:AT4G13760 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00536611 RefSeq:NP_193112.2
UniGene:At.54312 ProteinModelPortal:F4JTS9 SMR:F4JTS9
EnsemblPlants:AT4G13760.1 GeneID:827010 KEGG:ath:AT4G13760
OMA:NPRITIS ArrayExpress:F4JTS9 Uniprot:F4JTS9
Length = 404
Score = 214 (80.4 bits), Expect = 2.0e-37, Sum P(3) = 2.0e-37
Identities = 48/129 (37%), Positives = 76/129 (58%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA +SPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LT+
Sbjct: 208 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNVNCGPGHGISVGSLGKNKDEKDVKDLTI 267
Query: 146 RNCTFTGTN 154
R+ F GT+
Sbjct: 268 RDVIFNGTS 276
Score = 147 (56.8 bits), Expect = 2.0e-37, Sum P(3) = 2.0e-37
Identities = 41/112 (36%), Positives = 58/112 (51%)
Query: 150 FTGTNIVTNNVENPIVIDQLYCPYNKCNI--KVPSQVKTSNVRFNNIRGTSANKI----- 202
F NI +V PI IDQ YCP+ C K S V+ N++ NI GTS NK+
Sbjct: 296 FLYENIQMIDVGKPINIDQKYCPHPPCEHEQKGESHVQIQNLKLKNIYGTSKNKVAVNLQ 355
Query: 203 -----PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC+NI + +IN NG+ V+ +T +C NV ++ GK +P C+
Sbjct: 356 CSKRFPCKNIELIDINITNNGL---VDS-FSTLVCENVDGSVSGKMVPQHCI 403
Score = 82 (33.9 bits), Expect = 2.0e-37, Sum P(3) = 2.0e-37
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+FNV+ G+ +DG D++ F + W AC S + VP G +
Sbjct: 30 MFNVQRHGSKSDGKTDNTNVFTSVWNRACRRKSGSSKIYVPKGTF 74
Score = 49 (22.3 bits), Expect = 1.1e-14, Sum P(3) = 1.1e-14
Identities = 27/119 (22%), Positives = 52/119 (43%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS-PNTEGI-HIGSSNG 105
I+F ++ND +I+G ++D + G + LND + T G + +SN
Sbjct: 112 IKFKYINDLSISGSGTLDGQ-------GKQSWPLNDCHKNPNCPKLAMTMGFAFVNNSNI 164
Query: 106 SEISHSVIATGD-DCVSLGH----GISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNN 159
+I+ G + S+ H G+++ + G N + + + N + TNI T +
Sbjct: 165 KDITSLNSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMGSCSNIHISNTNIGTGD 223
>TAIR|locus:2047218 [details] [associations]
symbol:AT2G15460 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC006920
ProtClustDB:CLSN2679499 IPI:IPI00544781 PIR:C84529
RefSeq:NP_179148.1 UniGene:At.52750 ProteinModelPortal:Q8S8F3
EnsemblPlants:AT2G15460.1 GeneID:816038 KEGG:ath:AT2G15460
TAIR:At2g15460 InParanoid:Q8S8F3 PhylomeDB:Q8S8F3
Genevestigator:Q8S8F3 Uniprot:Q8S8F3
Length = 402
Score = 214 (80.4 bits), Expect = 2.5e-37, Sum P(3) = 2.5e-37
Identities = 49/129 (37%), Positives = 75/129 (58%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + +IS + I TGDDC+++ GHGISVGSLGK ++++V L V
Sbjct: 208 SCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKSKDEKDVKDLIV 267
Query: 146 RNCTFTGTN 154
R+ F GT+
Sbjct: 268 RDVIFNGTS 276
Score = 142 (55.0 bits), Expect = 2.5e-37, Sum P(3) = 2.5e-37
Identities = 41/108 (37%), Positives = 54/108 (50%)
Query: 150 FTGTNIVTNNVENPIVIDQLYCPYNKCNI--KVPSQVKTSNVRFNNIRGTSANKI----- 202
F NI +V PI IDQ YCP+ C K S V+ N++ NI GTS NK+
Sbjct: 296 FVYENIQMIDVGKPINIDQKYCPHPPCEHERKGESHVQIQNLKLKNIYGTSKNKVAVNLQ 355
Query: 203 -----PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
PC+N+ + +IN NGV +G +TS+C NV GK P
Sbjct: 356 CSKIFPCKNVELIDINIKQNGVK---DG-SSTSVCENVDGFARGKMFP 399
Score = 86 (35.3 bits), Expect = 2.5e-37, Sum P(3) = 2.5e-37
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ GA DG D++ AF + W AC S + VP G +
Sbjct: 30 VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTF 74
Score = 37 (18.1 bits), Expect = 3.5e-13, Sum P(3) = 3.5e-13
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 48 IRFNFLNDSTITGIKSVDSR 67
I F ++N+ +I+G ++D +
Sbjct: 112 INFRYINNLSISGSGTLDGQ 131
>TAIR|locus:2066251 [details] [associations]
symbol:AT2G26620 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC002505 IPI:IPI00545169 PIR:T00995 RefSeq:NP_180230.1
UniGene:At.52927 ProteinModelPortal:O48729 SMR:O48729
EnsemblPlants:AT2G26620.1 GeneID:817203 KEGG:ath:AT2G26620
TAIR:At2g26620 InParanoid:O48729 OMA:ISNINCG PhylomeDB:O48729
ProtClustDB:CLSN2679499 ArrayExpress:O48729 Genevestigator:O48729
Uniprot:O48729
Length = 402
Score = 216 (81.1 bits), Expect = 3.8e-37, Sum P(3) = 3.8e-37
Identities = 50/129 (38%), Positives = 77/129 (59%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +S+ F F+N+S I I S++S+ H N ++ + + ITA +DSPNT+GI +G
Sbjct: 148 PKLAISMGFAFVNNSNIKDITSLNSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + +IS++ I TGDDC+++ GHGISVGSLGK ++++V L V
Sbjct: 208 SCSNIQISNTNIGTGDDCIAILSGTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFV 267
Query: 146 RNCTFTGTN 154
R+ F GT+
Sbjct: 268 RDVIFNGTS 276
Score = 141 (54.7 bits), Expect = 3.8e-37, Sum P(3) = 3.8e-37
Identities = 38/110 (34%), Positives = 54/110 (49%)
Query: 150 FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI------- 202
F NI +V PI IDQ YCP+ C + S V+ +++ NI GTS NK+
Sbjct: 296 FVYENIQMIDVGKPINIDQKYCPHPPCEHERKSHVQIQDLKLKNIYGTSKNKVAVNLQCS 355
Query: 203 ---PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC+N+ + +IN NG+ +G T +C NV GK P C+
Sbjct: 356 KSFPCKNVELIDINIKQNGLE---DGSSIT-VCENVDGFARGKMFPQHCL 401
Score = 83 (34.3 bits), Expect = 3.8e-37, Sum P(3) = 3.8e-37
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ G+ DG D++ AF + W AC S + VP G +
Sbjct: 30 VFNVQRHGSKPDGKTDNTNAFTSIWSRACKRISGSSKIYVPKGTF 74
Score = 37 (18.1 bits), Expect = 9.5e-13, Sum P(3) = 9.5e-13
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 48 IRFNFLNDSTITGIKSVDSR 67
I F ++N+ +I+G ++D +
Sbjct: 112 INFRYINNLSISGSGTLDGQ 131
>TAIR|locus:2030803 [details] [associations]
symbol:AT1G43100 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC026757
HSSP:P26509 ProtClustDB:CLSN2679499 IPI:IPI00518656 PIR:C96498
RefSeq:NP_175005.1 UniGene:At.52009 ProteinModelPortal:Q9C8C2
SMR:Q9C8C2 EnsemblPlants:AT1G43100.1 GeneID:840909
KEGG:ath:AT1G43100 TAIR:At1g43100 InParanoid:Q9C8C2
PhylomeDB:Q9C8C2 Genevestigator:Q9C8C2 Uniprot:Q9C8C2
Length = 444
Score = 218 (81.8 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 50/129 (38%), Positives = 75/129 (58%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N + + + ITA DSPNT+GI +G
Sbjct: 148 PELAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTV 267
Query: 146 RNCTFTGTN 154
R+ F GT+
Sbjct: 268 RDTVFNGTS 276
Score = 123 (48.4 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 143 LTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNI--KVPSQVKTSNVRFNNIRGTSAN 200
L V N F NI +V PI IDQ YCP+ C K S V+ +++ NI GTS N
Sbjct: 291 LVVSN--FIYENIQMIDVGKPINIDQKYCPHPPCEHEKKGKSHVQIQDIKLKNIYGTSNN 348
Query: 201 KI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPAT 247
+ PC+N+ + +IN + G+ E +T++C NV ++ GK +T
Sbjct: 349 IVAVNLQCSKSFPCKNVELIDINLKHTGL----EKGHSTAMCENVDGSVRGKNGSST 401
Score = 97 (39.2 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ +G+ DG D++ AF + W+ AC S + VP GK+
Sbjct: 30 VFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGKF 74
Score = 45 (20.9 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 23/115 (20%), Positives = 52/115 (45%)
Query: 48 IRFNFLNDSTITGIKSVDSR-YFHINILGCY-NLKLNDLKITAHADSPNTEGIHIGSSNG 105
I F ++N+ +I+G ++D + + + C+ N +L +T N I +S
Sbjct: 112 INFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPELAMTMGFAFVNNSRIKDITSLN 171
Query: 106 SEISH-SVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNN 159
S++ H + + ++ G+++ + G N + + + N + TNI T +
Sbjct: 172 SKMGHFNFFSVHRFNIT---GVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGD 223
>TAIR|locus:2030791 [details] [associations]
symbol:AT1G43090 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC026757
HSSP:P26509 ProtClustDB:CLSN2679499 IPI:IPI00535097 PIR:B96498
RefSeq:NP_175004.1 UniGene:At.52008 ProteinModelPortal:Q9C8C3
EnsemblPlants:AT1G43090.1 GeneID:840908 KEGG:ath:AT1G43090
TAIR:At1g43090 InParanoid:Q9C8C3 OMA:CTANDAS PhylomeDB:Q9C8C3
Genevestigator:Q9C8C3 Uniprot:Q9C8C3
Length = 444
Score = 218 (81.8 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 50/129 (38%), Positives = 75/129 (58%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N + + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTV 267
Query: 146 RNCTFTGTN 154
R+ F GT+
Sbjct: 268 RDTVFNGTS 276
Score = 123 (48.4 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 143 LTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNI--KVPSQVKTSNVRFNNIRGTSAN 200
L V N F NI +V PI IDQ YCP+ C K S V+ +++ NI GTS N
Sbjct: 291 LVVSN--FIYENIQMIDVGKPINIDQKYCPHPPCEHEKKGKSHVQIQDIKLKNIYGTSNN 348
Query: 201 KI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPAT 247
+ PC+N+ + +IN + G+ E +T++C NV ++ GK +T
Sbjct: 349 IVAVNLQCSKSFPCKNVELIDINLKHTGL----EKGHSTAMCENVDGSVRGKNGSST 401
Score = 91 (37.1 bits), Expect = 6.3e-36, Sum P(3) = 6.3e-36
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ +G+ DG D++ AF + W+ AC S + VP G +
Sbjct: 30 VFNVRRYGSRPDGKTDNANAFTSVWKHACTRISGSSKIYVPKGTF 74
Score = 42 (19.8 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 23/115 (20%), Positives = 51/115 (44%)
Query: 48 IRFNFLNDSTITGIKSVDSR-YFHINILGCY-NLKLNDLKITAHADSPNTEGIHIGSSNG 105
I F ++N+ +I+G ++D + + + C+ N L +T N I +S
Sbjct: 112 INFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCPKLAMTMGFAFVNNSRIKDITSLN 171
Query: 106 SEISH-SVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNN 159
S++ H + + ++ G+++ + G N + + + N + TNI T +
Sbjct: 172 SKMGHFNFFSVHRFNIT---GVTITAPGDSPNTDGIKMGSCSNIHISNTNIGTGD 223
>TAIR|locus:2016314 [details] [associations]
symbol:AT1G80170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009505 "plant-type cell wall" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 GO:GO:0009505 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC009322 EMBL:AY046002
EMBL:AY142668 IPI:IPI00518842 PIR:D96833 RefSeq:NP_565232.1
UniGene:At.11620 ProteinModelPortal:Q94AJ5 SMR:Q94AJ5 IntAct:Q94AJ5
STRING:Q94AJ5 EnsemblPlants:AT1G80170.1 GeneID:844357
KEGG:ath:AT1G80170 GeneFarm:519 TAIR:At1g80170 InParanoid:Q94AJ5
OMA:KWLYFHG PhylomeDB:Q94AJ5 ProtClustDB:PLN02793
Genevestigator:Q94AJ5 Uniprot:Q94AJ5
Length = 444
Score = 191 (72.3 bits), Expect = 4.8e-33, Sum P(3) = 4.8e-33
Identities = 44/127 (34%), Positives = 68/127 (53%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++ F+ + + + +DS+ HI + C + ++ LK+ A A SPNT+GIHI
Sbjct: 175 GAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISV 234
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S G I ++ ++TGDDC+S+ GHGIS+GSLGK + EEV +TV
Sbjct: 235 SRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDITVD 294
Query: 147 NCTFTGT 153
+ T
Sbjct: 295 TAIISDT 301
Score = 117 (46.2 bits), Expect = 4.8e-33, Sum P(3) = 4.8e-33
Identities = 32/102 (31%), Positives = 48/102 (47%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----IPCQNIGI 209
NI NNV NPI+IDQ YC K S + N+ F ++RGTSA+K I C +
Sbjct: 324 NIKMNNVSNPIIIDQYYCDSRKPCANQTSAISIENISFVHVRGTSASKEAIKISCSDSSP 383
Query: 210 GNINWVYNGVNVKVEGPE--TTSLCSNVKPTLFGKQIPATCV 249
N + ++++ + T S C + G+ P C+
Sbjct: 384 CR-NILLQDIDLEPSNGDGFTESFCWEAYGSSSGQVYPPPCL 424
Score = 99 (39.9 bits), Expect = 4.8e-33, Sum P(3) = 4.8e-33
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
+ +V +FGA +G+ DD+KAF AW+ AC+ +K+ +LVP
Sbjct: 52 LLHVGNFGAKGNGVTDDTKAFADAWKTACS-SKVKTRILVP 91
>TAIR|locus:2051764 [details] [associations]
symbol:AT2G43890 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC004005
EMBL:DQ056578 IPI:IPI00519700 PIR:T00669 RefSeq:NP_181917.1
UniGene:At.53115 ProteinModelPortal:O80559 SMR:O80559 PRIDE:O80559
EnsemblPlants:AT2G43890.1 GeneID:818993 KEGG:ath:AT2G43890
TAIR:At2g43890 InParanoid:O80559 OMA:RNVLFQN PhylomeDB:O80559
ProtClustDB:CLSN2683098 ArrayExpress:O80559 Genevestigator:O80559
Uniprot:O80559
Length = 392
Score = 214 (80.4 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 50/145 (34%), Positives = 78/145 (53%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A W KS P G S+ FN+ ND ++G+ S++S+ H+ I C N+ + +K
Sbjct: 128 RGASFWACRKSGKSCPVGAR-SMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRKVK 186
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG----------------HGISVG 129
+ A SPNT+G+H+ S G ++ TGDDC+S+G HGIS+G
Sbjct: 187 LVAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGISIG 246
Query: 130 SLGKGINDEEVVGLTVRNCTFTGTN 154
SLG+ N+ V +T+ N F+G++
Sbjct: 247 SLGRDANEAGVENITLINSVFSGSD 271
Score = 153 (58.9 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
Identities = 42/115 (36%), Positives = 58/115 (50%)
Query: 145 VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS------ 198
VRN F N++ NV+NPI++DQ YCP N+ K S VK S V + NI+GTS
Sbjct: 287 VRNVLFQ--NLIMKNVQNPIIVDQNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQAL 344
Query: 199 ----ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ PCQ I + +I +NG + TS C N+K G +P C+
Sbjct: 345 TFDCSRSNPCQAIRLHDIKLTFNGRSA-------TSTCKNIKGVKAGVVMPQGCL 392
Score = 89 (36.4 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 20/45 (44%), Positives = 24/45 (53%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV FGA DG D +KAF AW+ AC V VP G +L
Sbjct: 29 YNVVSFGAKPDGRTDSTKAFLGAWQAACR-SAAAVTVTVPRGSFL 72
>TAIR|locus:2093212 [details] [associations]
symbol:AT3G15720 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0031225
"anchored to membrane" evidence=TAS] [GO:0046658 "anchored to
plasma membrane" evidence=IDA] [GO:0009505 "plant-type cell wall"
evidence=IDA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975
GO:GO:0009505 CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792
KO:K01184 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB017071 GO:GO:0046658 IPI:IPI00519614 RefSeq:NP_566524.1
UniGene:At.39003 HSSP:O74213 ProteinModelPortal:Q9LW07 SMR:Q9LW07
STRING:Q9LW07 EnsemblPlants:AT3G15720.1 GeneID:820815
KEGG:ath:AT3G15720 GeneFarm:340 TAIR:At3g15720 InParanoid:Q9LW07
OMA:SLRINAP PhylomeDB:Q9LW07 ProtClustDB:PLN03003
Genevestigator:Q9LW07 GermOnline:AT3G15720 Uniprot:Q9LW07
Length = 456
Score = 201 (75.8 bits), Expect = 4.3e-31, Sum P(3) = 4.3e-31
Identities = 45/123 (36%), Positives = 69/123 (56%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+++F N+ ++G+ +DS HI+I C + ++ L+I A SPNT+GI +G+S+
Sbjct: 140 ALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNV 199
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +IATGDDC+++ GHGIS+GSLGK V + V+NC F
Sbjct: 200 VIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNF 259
Query: 151 TGT 153
GT
Sbjct: 260 RGT 262
Score = 94 (38.1 bits), Expect = 4.3e-31, Sum P(3) = 4.3e-31
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 146 RNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIK--VPSQVKTSNVRFNNIRGTSANK 201
R TF G I +NVENPI+IDQ Y + N K S V+ S V F+N GTS ++
Sbjct: 279 RMITFNG--ITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKVVFSNFIGTSKSE 334
Score = 93 (37.8 bits), Expect = 4.3e-31, Sum P(3) = 4.3e-31
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+V FGAV DG+ DDS+AF AW C+ G +VP G
Sbjct: 25 DVTQFGAVGDGVTDDSQAFLKAWEAVCSGTG-DGQFVVPAG 64
>TAIR|locus:2043894 [details] [associations]
symbol:AT2G43880 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC004005
IPI:IPI00519414 PIR:T00668 RefSeq:NP_181916.1 UniGene:At.36829
ProteinModelPortal:Q9SLM8 SMR:Q9SLM8 PaxDb:Q9SLM8 PRIDE:Q9SLM8
EnsemblPlants:AT2G43880.1 GeneID:818992 KEGG:ath:AT2G43880
TAIR:At2g43880 InParanoid:Q9SLM8 OMA:GDYANEE PhylomeDB:Q9SLM8
ProtClustDB:CLSN2912912 ArrayExpress:Q9SLM8 Genevestigator:Q9SLM8
Uniprot:Q9SLM8
Length = 394
Score = 220 (82.5 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 54/144 (37%), Positives = 80/144 (55%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A W K P G SI F++ N+ ++G+ S +S+ H+ + N+++ +++
Sbjct: 130 RGAGYWSCRKKGSHCPQGAR-SISFSWCNNVLLSGLSSFNSQNMHVTVHHSSNVRIENVR 188
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
I A + SPNT+GIH+ SS+G IS IATGDDC++L GHGIS+G
Sbjct: 189 IRAPSGSPNTDGIHVQSSSGVTISGGTIATGDDCIALSQGSRNIWIERVNCGPGHGISIG 248
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT 153
SLG N+E V +TV + FT T
Sbjct: 249 SLGDYANEEGVQNVTVTSSVFTKT 272
Score = 142 (55.0 bits), Expect = 1.1e-30, Sum P(2) = 1.1e-30
Identities = 38/110 (34%), Positives = 52/110 (47%)
Query: 145 VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----AN 200
V N F N++ NNVENP++IDQ YCP K + S VK S V F NI+GTS A
Sbjct: 289 VNNVVFR--NLIMNNVENPVIIDQNYCPNGKGCPRQSSGVKISGVTFANIKGTSTTPIAM 346
Query: 201 KIPCQNIGIGNINWV-YNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
K+ C G + + + + + S C N G +P C+
Sbjct: 347 KLDCS--GSNHCTGLRLQDIKLTYMRRSSASYCRNAHGRASGVMVPRNCM 394
Score = 94 (38.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV+ +GA DG D +K+F TAW AC ++ V VP G YL
Sbjct: 31 FNVQRYGARGDGRADATKSFLTAWSLACG-SRARAMVYVPRGTYL 74
>TAIR|locus:2024680 [details] [associations]
symbol:PGA4 "polygalacturonase 4" species:3702
"Arabidopsis thaliana" [GO:0004650 "polygalacturonase activity"
evidence=IEA;ISS] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005618 GO:GO:0005576 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC009525
EMBL:X72291 EMBL:Y16230 EMBL:AF428425 EMBL:AY065210 EMBL:AY133812
IPI:IPI00532768 PIR:S34199 RefSeq:NP_171778.1 UniGene:At.22350
ProteinModelPortal:P49062 SMR:P49062 STRING:P49062 PaxDb:P49062
PRIDE:P49062 EnsemblPlants:AT1G02790.1 GeneID:839391
KEGG:ath:AT1G02790 TAIR:At1g02790 InParanoid:P49062 KO:K01213
OMA:LVFEDIV PhylomeDB:P49062 ProtClustDB:CLSN2912732
Genevestigator:P49062 GermOnline:AT1G02790 GO:GO:0047911
Uniprot:P49062
Length = 422
Score = 245 (91.3 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 58/150 (38%), Positives = 88/150 (58%)
Query: 22 ETAWR-EACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 80
E W+ + C G K +PP S++F + + I GI SV+++ FH+ ++ N+
Sbjct: 151 EAVWKADGC---GKKVQCNLPP---TSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVN 204
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG----------------H 124
+ ++K+TA A+SPNT+GIH+ +++ I S IATGDDCVS+G H
Sbjct: 205 IQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGH 264
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGTN 154
G+SVGSLGK N+E+V G+ V NCT T+
Sbjct: 265 GLSVGSLGKYKNEEDVSGIHVNNCTMIETD 294
Score = 107 (42.7 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 33/105 (31%), Positives = 49/105 (46%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IP 203
NI+ +V+NPI+IDQ Y SQV S++ F NIRGT+ K +P
Sbjct: 317 NIIMQSVKNPIIIDQNYGSRGG-----DSQVAISDILFKNIRGTTITKDVVQIMCSKSVP 371
Query: 204 CQNIGIGNINWVY----NGVNVKVEGPETTSLCSNVKPTLFGKQI 244
CQ + + ++N Y G G +LC N +FG ++
Sbjct: 372 CQGVNVVDVNLDYVGKTGGEKKSSSGGLVGALCDNAN-VIFGGKL 415
Score = 88 (36.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
V+++ FGAV DG + KAF W + C+ + + +LVP G +L+
Sbjct: 51 VYDITKFGAVGDGSTNTFKAFLNTWIQVCD-SPVPATLLVPKGTFLA 96
>TAIR|locus:2043974 [details] [associations]
symbol:AT2G43860 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC002333
EMBL:DQ056577 IPI:IPI00540510 PIR:D84871 RefSeq:NP_181914.1
UniGene:At.53113 ProteinModelPortal:O22818 SMR:O22818 PRIDE:O22818
EnsemblPlants:AT2G43860.1 GeneID:818990 KEGG:ath:AT2G43860
GeneFarm:16 TAIR:At2g43860 InParanoid:O22818 OMA:CASANPT
PhylomeDB:O22818 ProtClustDB:CLSN2912911 Genevestigator:O22818
Uniprot:O22818
Length = 405
Score = 217 (81.4 bits), Expect = 9.8e-29, Sum P(3) = 9.8e-29
Identities = 49/124 (39%), Positives = 76/124 (61%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ F+ N+ I+G+ S++S+ FHI I N+ ++ +K++A +SPNT+GIH+ SS+
Sbjct: 155 SLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVESSHSV 214
Query: 107 EISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCTF 150
I++S I TGDDC+S+G HGIS+GSLG+ ++ V +TV N F
Sbjct: 215 HITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTVSNVDF 274
Query: 151 TGTN 154
GTN
Sbjct: 275 MGTN 278
Score = 130 (50.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 43/132 (32%), Positives = 62/132 (46%)
Query: 97 GIHIGSSNGSEISH---SVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
GI IGS +E +V + D + +G+ + + GK N RN F
Sbjct: 249 GISIGSLGRAEEEQGVDNVTVSNVDFMGTNNGVRIKTWGKDSNS------FARNIVFQHI 302
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------P 203
N+ V+NPI+IDQ YC + C K S VK SNVR+ +I GTS ++ P
Sbjct: 303 NM--KMVKNPIIIDQHYCLHKPCP-KQESGVKVSNVRYEDIHGTSNTEVAVLLDCSKEKP 359
Query: 204 CQNIGIGNINWV 215
C I + ++N V
Sbjct: 360 CTGIVMDDVNLV 371
Score = 92 (37.4 bits), Expect = 9.8e-29, Sum P(3) = 9.8e-29
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
NV +GA DG KD +KAF AW AC + ++VP G++L
Sbjct: 34 NVLSYGAKPDGSKDSTKAFLAAWDVACA-SANPTTIIVPKGRFL 76
Score = 50 (22.7 bits), Expect = 9.8e-29, Sum P(3) = 9.8e-29
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 206 NIGIGNINWV--YNGVNVKVEGPETTSLCSNV 235
N+ + N++++ NGV +K G ++ S N+
Sbjct: 266 NVTVSNVDFMGTNNGVRIKTWGKDSNSFARNI 297
>TAIR|locus:2032125 [details] [associations]
symbol:AT1G78400 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 IPI:IPI00544920
RefSeq:NP_177961.2 UniGene:At.52555 ProteinModelPortal:F4IA77
PRIDE:F4IA77 EnsemblPlants:AT1G78400.1 GeneID:844176
KEGG:ath:AT1G78400 OMA:INIDQRY ArrayExpress:F4IA77 Uniprot:F4IA77
Length = 404
Score = 229 (85.7 bits), Expect = 7.3e-28, Sum P(2) = 7.3e-28
Identities = 53/125 (42%), Positives = 73/125 (58%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++ F F+ S +T IKS++S+ H+N + + + I A DSPNT+GI IGSSN
Sbjct: 155 MNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNH 214
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I H IATGDDC+++ GHGISVGSLGK ++ V GL VRN
Sbjct: 215 MKIHHVDIATGDDCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSI 274
Query: 150 FTGTN 154
F GT+
Sbjct: 275 FNGTS 279
Score = 160 (61.4 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 62/193 (32%), Positives = 92/193 (47%)
Query: 71 INIL-GCYNLKLNDLKITAHADSPNTEGIHIGSSN---GSEISHSVIATGDDCVSLGHGI 126
I IL G +NL +N K+ P GI +GS G + +I S+ +G
Sbjct: 229 IAILSGTFNLDIN--KVNC---GPG-HGISVGSLGKFKGEKSVQGLIVRN----SIFNGT 278
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
S G K L V N F ++ +V++PI IDQ YCP C+ + S+++
Sbjct: 279 SNGVRIKTWPSPGEPNL-VSNFLFKNLQMI--DVQSPINIDQRYCPNPPCSFQSFSKIQI 335
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V+F NI GTS K +PC+N+ + NIN V+ G +GP TS+C NV
Sbjct: 336 RDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRGR----DGP-ATSVCENVG 390
Query: 237 PTLFGKQIPATCV 249
+ GK P +C+
Sbjct: 391 GWIGGKISPPSCI 403
Score = 106 (42.4 bits), Expect = 7.3e-28, Sum P(2) = 7.3e-28
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V+ +GA DG D++ AF AW++AC W G+ V +P G +
Sbjct: 34 VFDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLPR-VYIPFGTF 77
>TAIR|locus:2034131 [details] [associations]
symbol:AT1G65570 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GO:GO:0009506 GO:GO:0005576
GO:GO:0005975 CAZy:GH28 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 EMBL:AC001229
EMBL:DQ446397 IPI:IPI00540193 PIR:F96680 RefSeq:NP_176735.1
UniGene:At.52380 ProteinModelPortal:O04474 PRIDE:O04474
EnsemblPlants:AT1G65570.1 GeneID:842868 KEGG:ath:AT1G65570
TAIR:At1g65570 InParanoid:O04474 OMA:ITIIMSH PhylomeDB:O04474
ProtClustDB:CLSN2913520 ArrayExpress:O04474 Genevestigator:O04474
Uniprot:O04474
Length = 397
Score = 228 (85.3 bits), Expect = 8.2e-28, Sum P(2) = 8.2e-28
Identities = 58/154 (37%), Positives = 85/154 (55%)
Query: 17 DSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGC 76
D+K T W +C +G P G ++RF N+ I G+ S++S+ FHI I C
Sbjct: 131 DAKG-STLW--SCKANGYNC----PEGA-TTLRFMDSNNVKIKGVLSLNSQLFHIAINRC 182
Query: 77 YNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG------------- 123
N+K+ D++I A +SPNT+GIHI S E+ ++ I TGDDC+S+G
Sbjct: 183 RNIKIEDVRIIAPDESPNTDGIHIQLSTDIEVRNASIKTGDDCISIGPGTKNLMVDGITC 242
Query: 124 ---HGISVGSLGKGINDEEVVGLTVRNCTFTGTN 154
HGIS+GSL K I ++ V +TV+N F T+
Sbjct: 243 GPGHGISIGSLAKSIEEQGVENVTVKNAVFVRTD 276
Score = 106 (42.4 bits), Expect = 8.2e-28, Sum P(2) = 8.2e-28
Identities = 33/110 (30%), Positives = 50/110 (45%)
Query: 145 VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN---- 200
V F G +V NV PI+IDQ YCP + S +K ++V ++ I GTSA
Sbjct: 292 VERVRFLGAIMV--NVSYPILIDQNYCPGDSSCPSQESGIKINDVIYSGIMGTSATEIAI 349
Query: 201 KIPC-QNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
K+ C + + I +N+ G + C+NV G P+ C+
Sbjct: 350 KMDCSEKVPCTGIRM--QAINLTSYGEAAKTSCTNVSGKQLGLVTPSGCL 397
Score = 93 (37.8 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL--VPPGKYL---SIRF 50
NV FGA +GI + +KAF AW AC G++ +V+ VP G+YL +RF
Sbjct: 32 NVLSFGANPNGIVESAKAFSDAWDAAC---GVEDSVVIYVPKGRYLVSGEVRF 81
>TAIR|locus:2020352 [details] [associations]
symbol:AT1G17150 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 OMA:ISNTHIS
IPI:IPI00546751 RefSeq:NP_173158.1 UniGene:At.51644
ProteinModelPortal:F4I650 SMR:F4I650 PRIDE:F4I650
EnsemblPlants:AT1G17150.1 GeneID:838286 KEGG:ath:AT1G17150
Uniprot:F4I650
Length = 402
Score = 219 (82.2 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 51/135 (37%), Positives = 81/135 (60%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F+F+ +S++ GI S++S+ H N L + + + I A ++SPNT+GI I
Sbjct: 149 PKLAINMGFDFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIA 208
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+ +IS++ I+TGDDC+++ GHGIS+GSLGK +++ V GL V
Sbjct: 209 LSSNMQISNTHISTGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMV 268
Query: 146 RNCTFTGTNIVTNNV 160
RN FTGT TN +
Sbjct: 269 RNSVFTGT---TNGI 280
Score = 181 (68.8 bits), Expect = 5.5e-22, Sum P(2) = 5.5e-22
Identities = 54/164 (32%), Positives = 81/164 (49%)
Query: 97 GIHIGSSNGSEISHSVIATGDDCVSLGHGISVGSL-GKGINDEEVVGLTVRNCTFTGTNI 155
GI IGS ++ +V G + + + + G+ G I E T+R N+
Sbjct: 248 GISIGSLGKNKDEKNV--NG---LMVRNSVFTGTTNGIRIKTWESSASTIRIINLVYENL 302
Query: 156 VTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQ 205
NVENPI IDQ YCPY C+ S ++ NV NI GTS NK+ PC+
Sbjct: 303 QMINVENPIGIDQKYCPYPPCSNMGDSHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCK 362
Query: 206 NIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
++ + +IN ++GV +GP ++LC NV + GK +P C+
Sbjct: 363 DVQLIDINLTHHGV----DGP-ASALCENVDGSATGKMVPPHCL 401
Score = 111 (44.1 bits), Expect = 3.1e-27, Sum P(2) = 3.1e-27
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V+ +GA DG D++ AF AW++AC W+G S + +P G +
Sbjct: 32 VFDVRSYGAKGDGKMDNTNAFTNAWKDACRWNG-PSKMYIPLGTF 75
Score = 39 (18.8 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 11/39 (28%), Positives = 19/39 (48%)
Query: 34 IKSAVLVPPG-----KYLSIRFNFLNDSTITGIKSVDSR 67
I +L PP K + I F ++N T+ G ++D +
Sbjct: 94 IDGTLLAPPNNDDIKKEIWINFRYINYLTVFGDGTLDGQ 132
>TAIR|locus:2046555 [details] [associations]
symbol:AT2G33160 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004650
"polygalacturonase activity" evidence=IEA;ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] InterPro:IPR000743
InterPro:IPR012337 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 GO:GO:0003676
CAZy:GH28 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 SUPFAM:SSF53098 EMBL:AC002334
IPI:IPI00526966 PIR:A84742 RefSeq:NP_180874.1 UniGene:At.50116
ProteinModelPortal:O49319 SMR:O49319 EnsemblPlants:AT2G33160.1
GeneID:817877 KEGG:ath:AT2G33160 TAIR:At2g33160 InParanoid:O49319
PhylomeDB:O49319 ArrayExpress:O49319 Genevestigator:O49319
Uniprot:O49319
Length = 664
Score = 218 (81.8 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 49/124 (39%), Positives = 71/124 (57%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++I F F+ S I G++S++S+ H N+ + + + ITA DSPNT+GI IG S+
Sbjct: 153 MNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSH 212
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I + I TGDDC+++ GHGISVGSLG+ ++ V GLTVRN
Sbjct: 213 MQIYNVTIGTGDDCIAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSI 272
Query: 150 FTGT 153
GT
Sbjct: 273 INGT 276
Score = 191 (72.3 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 65/194 (33%), Positives = 97/194 (50%)
Query: 71 INIL-GCYNLKLNDLKI-TAHADSPNTEGIHIGSSN--GSEISHSVIATGDDCVSLGHGI 126
I IL G NL ++D++ H S + G + N G + +S+I D G+
Sbjct: 227 IAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSIINGTTD------GL 280
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNI--KVPSQV 184
+ + K ++ ++V N F NI NV NPIVIDQ YCP+ +C+ K S V
Sbjct: 281 RIKTWAKSVSQ-----ISVSN--FLYENIQMINVGNPIVIDQQYCPHGQCDSPGKYASHV 333
Query: 185 KTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+ +V++NNI GTS +K PCQ++ + NIN Y G + V T+LC N
Sbjct: 334 QIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLV-----TALCEN 388
Query: 235 VKPTLFGKQIPATC 248
V ++ GK +PA C
Sbjct: 389 VGGSIRGKIVPANC 402
Score = 113 (44.8 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL-SIRFNFLNDSTI 58
+F+V+++GA AD +D++ AF AW EAC W +S V +P G YL + F+ S+I
Sbjct: 31 IFDVRNYGARADSQRDNAFAFTKAWNEACQWSYGRSTVYIPSGIFYLRQVTFSGPCKSSI 90
Query: 59 T 59
T
Sbjct: 91 T 91
Score = 51 (23.0 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 21/97 (21%), Positives = 39/97 (40%)
Query: 135 INDEE-VVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNN 193
IN EE ++ V N T TG ++ P N CN + N+ F
Sbjct: 107 INQEEWILFKYVDNLTVTGGGLLDGQ-------GSYSWPLNDCNKNTNCRTLAMNIGFAF 159
Query: 194 IRGTSANKIPCQNIGIGNINWVYNGVNVKVEGPETTS 230
++ + N + N +G+ N +++ + + G T+
Sbjct: 160 VKSSKINGLRSINSKMGHFN-LFSVEDFNITGVTITA 195
>TAIR|locus:2030797 [details] [associations]
symbol:AT1G43080 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC026757 HSSP:P26509
ProtClustDB:CLSN2679499 EMBL:DQ056483 IPI:IPI00545441 PIR:A96498
RefSeq:NP_175003.1 UniGene:At.52007 ProteinModelPortal:Q9C8C4
SMR:Q9C8C4 PRIDE:Q9C8C4 EnsemblPlants:AT1G43080.1 GeneID:840907
KEGG:ath:AT1G43080 TAIR:At1g43080 InParanoid:Q9C8C4 OMA:VCENING
PhylomeDB:Q9C8C4 Genevestigator:Q9C8C4 Uniprot:Q9C8C4
Length = 404
Score = 218 (81.8 bits), Expect = 5.1e-25, Sum P(2) = 5.1e-25
Identities = 50/129 (38%), Positives = 75/129 (58%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N + + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTV 267
Query: 146 RNCTFTGTN 154
R+ F GT+
Sbjct: 268 RDTVFNGTS 276
Score = 132 (51.5 bits), Expect = 8.2e-12, Sum P(2) = 8.2e-12
Identities = 58/193 (30%), Positives = 88/193 (45%)
Query: 71 INIL-GCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI-ATGDDCVSLGHGISV 128
I IL G NL ++++K P GI +GS ++ V T D V +G S
Sbjct: 226 IAILSGTTNLDISNIKC-----GPG-HGISVGSLGKNKDEKDVKHLTVRDTVF--NGTSD 277
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNI--KVPSQVKT 186
G K + + V N F NI +V PI IDQ YCP+ C K S V+
Sbjct: 278 GIRIKTW-ESSASKIVVSN--FIYENIQMIDVGKPINIDQKYCPHPPCEHEKKGESHVQI 334
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+++ NI GTS N + PC+N+ + +IN + G+ E +T++C NV
Sbjct: 335 QDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTGL----EKGHSTAMCENVD 390
Query: 237 PTLFGKQIPATCV 249
++ K +P C+
Sbjct: 391 GSVRSKMVPQHCL 403
Score = 91 (37.1 bits), Expect = 5.1e-25, Sum P(2) = 5.1e-25
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ +G+ DG D++ AF + W+ AC S + VP G +
Sbjct: 30 VFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGTF 74
>TAIR|locus:2155292 [details] [associations]
symbol:AT5G44840 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB010693
EMBL:AC002342 IPI:IPI00532756 RefSeq:NP_199297.1 UniGene:At.55366
ProteinModelPortal:O48576 SMR:O48576 STRING:O48576
EnsemblPlants:AT5G44840.1 GeneID:834514 KEGG:ath:AT5G44840
TAIR:At5g44840 InParanoid:O48576 OMA:NANEANG PhylomeDB:O48576
ProtClustDB:CLSN2687281 Genevestigator:O48576 Uniprot:O48576
Length = 381
Score = 206 (77.6 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 50/123 (40%), Positives = 69/123 (56%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ F ND ITGI S +S HI+I C +K+ +K+ A DSPNT+GI+I S+ +
Sbjct: 137 LHFQRCNDLMITGITSFNSPKNHISISECKRVKITKIKLVAPHDSPNTDGINISESSDVD 196
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I +VI TGDDCV++ GHGISVGS+G+ + V + V NCTF
Sbjct: 197 IYDTVIGTGDDCVAINSGSMNINIARMNCGPGHGISVGSVGRDGEESIVENVQVTNCTFI 256
Query: 152 GTN 154
T+
Sbjct: 257 RTD 259
Score = 97 (39.2 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
+++V +FGA +GI DDSKAF AW C G ++P K
Sbjct: 23 IYDVLEFGADGNGITDDSKAFVKAWSAMCGSGGNSKTFIIPSNK 66
Score = 97 (39.2 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 47/160 (29%), Positives = 74/160 (46%)
Query: 97 GIHIGS--SNGSE-ISHSVIATGDDCVSLGHGISVGSL--GKGINDEEVVGLTVRNCTFT 151
GI +GS +G E I +V T + +G + + GKG + ++ TF
Sbjct: 230 GISVGSVGRDGEESIVENVQVTNCTFIRTDNGARIKTWPNGKGY----AKNILFKSLTFR 285
Query: 152 GTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----KIPCQNI 207
T +NPI+IDQ Y + +++ S V SNV F ++RGTS KI C +
Sbjct: 286 ET-------KNPIIIDQNYVDKGRLDVE-ESAVAISNVTFTDLRGTSKLDEIIKIDCSKV 337
Query: 208 GIGNINWVYNGVNVK-VEGPETTSLCSNVKPTLFGKQIPA 246
+ V + +++ V+G + CSNV +GK I A
Sbjct: 338 TYCK-DIVLDKIDIATVDGNKPIVECSNV----YGKSINA 372
>TAIR|locus:2047223 [details] [associations]
symbol:AT2G15450 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC006920
ProtClustDB:CLSN2679499 IPI:IPI00530935 PIR:B84529
RefSeq:NP_179147.1 UniGene:At.52749 ProteinModelPortal:Q9SJN7
SMR:Q9SJN7 EnsemblPlants:AT2G15450.1 GeneID:816037
KEGG:ath:AT2G15450 TAIR:At2g15450 InParanoid:Q9SJN7
PhylomeDB:Q9SJN7 Genevestigator:Q9SJN7 Uniprot:Q9SJN7
Length = 404
Score = 214 (80.4 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 49/129 (37%), Positives = 75/129 (58%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + +IS + I TGDDC+++ GHGISVGSLGK ++++V L V
Sbjct: 208 SCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDLIV 267
Query: 146 RNCTFTGTN 154
R+ F GT+
Sbjct: 268 RDVIFNGTS 276
Score = 150 (57.9 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 60/208 (28%), Positives = 92/208 (44%)
Query: 71 INILGCYNLKLNDLKITAHADS----PNTEGIHIGSSN---GSEISHSVIATGDDCVSLG 123
I + C N++++D I D T ++I + N G IS + D +
Sbjct: 204 IKMGSCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDVK 263
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNV--EN--------PIVIDQLYCPY 173
I + G +D G+ ++N + + I+ +N EN PI IDQ YCP+
Sbjct: 264 DLIVRDVIFNGTSD----GIRIKNWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPH 319
Query: 174 NKCNI--KVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
C K S V+ N++ NI GTS NK+ PC+N+ + +IN NGV
Sbjct: 320 PPCEHERKGESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNGVK- 378
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
+G +TS+C NV GK P C+
Sbjct: 379 --DG-SSTSVCENVDGFARGKMFPPHCL 403
Score = 86 (35.3 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ GA DG D++ AF + W AC S + VP G +
Sbjct: 30 VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTF 74
Score = 37 (18.1 bits), Expect = 2.5e-14, Sum P(3) = 2.5e-14
Identities = 6/20 (30%), Positives = 14/20 (70%)
Query: 48 IRFNFLNDSTITGIKSVDSR 67
I F ++N+ +I+G ++D +
Sbjct: 112 INFRYINNLSISGSGTLDGQ 131
>TAIR|locus:2127836 [details] [associations]
symbol:AT4G32380 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00542951 RefSeq:NP_194964.2 UniGene:At.50389
ProteinModelPortal:F4JUA6 SMR:F4JUA6 EnsemblPlants:AT4G32380.1
GeneID:829373 KEGG:ath:AT4G32380 OMA:INANFPI Uniprot:F4JUA6
Length = 354
Score = 201 (75.8 bits), Expect = 2.8e-23, Sum P(2) = 2.8e-23
Identities = 50/124 (40%), Positives = 67/124 (54%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF + G+ ++S HI IL N L++L + A A SPNT+GI I S
Sbjct: 48 VAVRFFGCQNILYNGLTQINSPRNHITILDSNNATLSNLHLIAPASSPNTDGIDISHSQN 107
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I S I TGDDCV++ GHGIS+GSLG+G E V + VR+CT
Sbjct: 108 INIMSSTIKTGDDCVAIKRNSYNINVTYVTCGPGHGISIGSLGEGGASEVVQNVNVRHCT 167
Query: 150 FTGT 153
FTGT
Sbjct: 168 FTGT 171
Score = 89 (36.4 bits), Expect = 2.8e-23, Sum P(2) = 2.8e-23
Identities = 36/114 (31%), Positives = 48/114 (42%)
Query: 145 VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPS---QVKTSNVRFNNIRGTSAN- 200
V+N + ++ N PI+IDQ Y N K + VK S+V F + GT A
Sbjct: 187 VKNILYEDITLINANF--PIIIDQQYRD-NAGQYKQSAGATAVKVSDVTFRSFTGTCAAP 243
Query: 201 ---KIPCQ-NIGIGNINWVYNGVNVKVEGPET--TSLCSNVKPTLFGKQIPATC 248
K+ C N G NI V +N+ P+T TS C IP TC
Sbjct: 244 IAIKLDCDPNTGCDNI--VMEQINIASSSPKTPLTSYCKFAHVVSRFVSIPITC 295
>TAIR|locus:2167185 [details] [associations]
symbol:AT5G17200 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 KO:K01184 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AB005238
HSSP:P26214 IPI:IPI00532874 RefSeq:NP_197222.1 UniGene:At.54880
ProteinModelPortal:Q9FFI9 SMR:Q9FFI9 STRING:Q9FFI9
EnsemblPlants:AT5G17200.1 GeneID:831584 KEGG:ath:AT5G17200
TAIR:At5g17200 InParanoid:Q9FFI9 OMA:GSSHINI PhylomeDB:Q9FFI9
ProtClustDB:CLSN2914874 Genevestigator:Q9FFI9 Uniprot:Q9FFI9
Length = 421
Score = 195 (73.7 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 48/123 (39%), Positives = 70/123 (56%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ FN N I+ ++ ++S H+ + N+++ L++TA DSPNT+GI I + G
Sbjct: 155 AMHFNNCNGLRISNLRHLNSPRNHVGLSCSQNIEVRGLRMTAPGDSPNTDGIDISNCIGV 214
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I SVIATGDDC+++ GHGISVGSLG + E V + V+NCTF
Sbjct: 215 HIHDSVIATGDDCIAINSGSSHINITGIFCGPGHGISVGSLGVTGDFETVEEVRVKNCTF 274
Query: 151 TGT 153
T T
Sbjct: 275 TKT 277
Score = 98 (39.6 bits), Expect = 5.0e-23, Sum P(2) = 5.0e-23
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+V FGA+ DG DD+KAF AW C G +LVP GK ++
Sbjct: 40 SVTSFGAIGDGKTDDTKAFLKAWEAVCK-GGHNRKILVPQGKTFMLK 85
Score = 69 (29.3 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 50/210 (23%), Positives = 93/210 (44%)
Query: 53 LNDSTI-TGIK--SVDSRYFHINILG--C---YNLKLNDLKITAHADSPNTEGIHIGSSN 104
++DS I TG +++S HINI G C + + + L +T D E + + +
Sbjct: 216 IHDSVIATGDDCIAINSGSSHINITGIFCGPGHGISVGSLGVTG--DFETVEEVRVKNCT 273
Query: 105 GSEISHSV-IATGDDCVSLGHGISVGSLGKGINDEEVV-GLTVRNC-TFTGTNIVTNNVE 161
++ + V I T + IS + ++ ++ T N T G + +++ +
Sbjct: 274 FTKTQNGVRIKTYQNGSGYARKISFEDINMVASENPIIIDQTYHNGGTNGGISKSSSSYQ 333
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----IPCQ-NIGIGNINWVY 216
N + + P N K VK ++VR+ IRG+SA+ + C ++G +I V
Sbjct: 334 NCHLTAKQRTPSG--NGK---GVKVTDVRYARIRGSSASDQDITLNCDADLGCSDI--VM 386
Query: 217 NGVNV--KVEGPETTSLCSNVKPTLFGKQI 244
+ VN+ G + S C N +LF ++
Sbjct: 387 DNVNMVSATFGHKLFSSCKNAHGSLFASKV 416
Score = 61 (26.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 36/140 (25%), Positives = 63/140 (45%)
Query: 43 GKYLS-IRFNFLNDSTITGIKSVDSR----YFHINILGC---YNLKLNDLKIT--AHADS 92
G+Y + I F+ +N +TG ++D R + ++N C +N N L+I+ H +S
Sbjct: 116 GRYTTWISFDSINGLVVTGGGTIDGRGSLWWGNVNNRPCAMHFN-NCNGLRISNLRHLNS 174
Query: 93 PNTEGIHIGSSNGSEISH-SVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFT 151
P + + S E+ + A GD + G IS +G I+D + T +C
Sbjct: 175 PRNH-VGLSCSQNIEVRGLRMTAPGDSPNTDGIDIS-NCIGVHIHDSVIA--TGDDC--- 227
Query: 152 GTNIVTNNVENPIVIDQLYC 171
I N+ + I I ++C
Sbjct: 228 ---IAINSGSSHINITGIFC 244
>TAIR|locus:2178052 [details] [associations]
symbol:AT5G39910 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00530705 RefSeq:NP_198807.1
UniGene:At.55265 ProteinModelPortal:F4KFW5
EnsemblPlants:AT5G39910.1 GeneID:833988 KEGG:ath:AT5G39910
OMA:NISRISC Uniprot:F4KFW5
Length = 373
Score = 177 (67.4 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 63/182 (34%), Positives = 84/182 (46%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I+ I DS F +++ + + L ITA DSPNT+GIHI S + S I TGD
Sbjct: 159 ISNIMVKDSPNFQMSLEDSKWVIVKQLTITADGDSPNTDGIHIQRSQNVIVYDSNIRTGD 218
Query: 118 DCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVE 161
DC+S+G HGIS+GSLG+ E V + VR+CTF T TN V
Sbjct: 219 DCISIGDGSKYINISRISCGPGHGISIGSLGRYGTKETVENVVVRDCTFRET---TNGVR 275
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
K V+ NV FN+I GTS K +PC++I + +
Sbjct: 276 -----------IKTWQTKA---VEIKNVMFNHIHGTSIKKPFVQLLCSKSVPCRDIFMND 321
Query: 212 IN 213
IN
Sbjct: 322 IN 323
Score = 129 (50.5 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV ++GA+ DG DDSKAF+ AW + CN+ G +S + +P G
Sbjct: 35 IFNVLNYGAIGDGFSDDSKAFKDAWEDTCNYIGSESIMEIPEG 77
>TAIR|locus:2023817 [details] [associations]
symbol:AT1G48100 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005618 GO:GO:0005576 GO:GO:0005975
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC023673
EMBL:AF410319 EMBL:AY050798 EMBL:AY096360 IPI:IPI00541837
PIR:C96521 RefSeq:NP_175244.1 UniGene:At.48286 UniGene:At.70184
ProteinModelPortal:Q949Z1 SMR:Q949Z1 EnsemblPlants:AT1G48100.1
GeneID:841228 KEGG:ath:AT1G48100 GeneFarm:478 TAIR:At1g48100
InParanoid:Q949Z1 OMA:QACVSNI PhylomeDB:Q949Z1
ProtClustDB:CLSN2682184 Genevestigator:Q949Z1 Uniprot:Q949Z1
Length = 475
Score = 184 (69.8 bits), Expect = 8.9e-22, Sum P(2) = 8.9e-22
Identities = 42/116 (36%), Positives = 67/116 (57%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF N+ + G++ +S FH+ GC + +N+++I++ SPNT+GIH+G++
Sbjct: 213 IRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVG 272
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRN 147
I +SV++ GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 273 IYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRN 328
Score = 104 (41.7 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 37/132 (28%), Positives = 56/132 (42%)
Query: 74 LGCYNLKLND----LKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS--LGHGIS 127
+G YN +++ + I + +G+ G S+G I + CVS
Sbjct: 271 VGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTV 330
Query: 128 VGSLGKGINDEEVVGLT--VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
+ G+ + G T V N F NI NV N I++DQ YC C + S VK
Sbjct: 331 IRDSDNGLRVKTWQGGTGSVSNLLFE--NIQMENVLNCIIVDQYYCQSKDCRNET-SAVK 387
Query: 186 TSNVRFNNIRGT 197
+V + NI+GT
Sbjct: 388 VFDVEYRNIKGT 399
Score = 100 (40.3 bits), Expect = 8.9e-22, Sum P(2) = 8.9e-22
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V FGAV DG DD+ AF+ AW+ AC ++S V++ P
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAAC---AVESGVVLAP 117
>TAIR|locus:2077407 [details] [associations]
symbol:QRT2 "QUARTET 2" species:3702 "Arabidopsis
thaliana" [GO:0004650 "polygalacturonase activity"
evidence=IEA;ISS;IDA] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0005975 "carbohydrate metabolic process"
evidence=IEA;ISS] [GO:0009830 "cell wall modification involved in
abscission" evidence=TAS] [GO:0009901 "anther dehiscence"
evidence=IMP] [GO:0010047 "fruit dehiscence" evidence=IMP]
[GO:0048235 "pollen sperm cell differentiation" evidence=IMP]
[GO:0045490 "pectin catabolic process" evidence=IMP]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0045490
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
GO:GO:0009901 GO:GO:0009830 GO:GO:0010047 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AC013483 GO:GO:0048235
IPI:IPI00516594 RefSeq:NP_187454.2 UniGene:At.40276
ProteinModelPortal:Q9SFB7 SMR:Q9SFB7 STRING:Q9SFB7
EnsemblPlants:AT3G07970.1 GeneID:819988 KEGG:ath:AT3G07970
TAIR:At3g07970 InParanoid:Q9SFB7 OMA:NIRLENA PhylomeDB:Q9SFB7
ProtClustDB:CLSN2690525 Genevestigator:Q9SFB7 Uniprot:Q9SFB7
Length = 439
Score = 185 (70.2 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 44/134 (32%), Positives = 70/134 (52%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++ F N+ ++ I+ +++ H+ C N+K +L +T+ ADSPNT+GIH+
Sbjct: 191 GAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSG 250
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
+ I S++ TGDDC+S+ GHGIS+GSLG+ ++ V + V
Sbjct: 251 TQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVN 310
Query: 147 NCTFTGTNIVTNNV 160
T GT TN V
Sbjct: 311 KATLIGT---TNGV 321
Score = 110 (43.8 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 45/162 (27%), Positives = 71/162 (43%)
Query: 97 GIHIGS---SNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
GI IGS N +V+ + +G+ + + G G+ +N F
Sbjct: 289 GISIGSLGEDNSEAYVSNVVVNKATLIGTTNGVRIKTWQGGH------GMA-KNIIFQ-- 339
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIP 203
+I+ NV NPI+I+Q YC + + S V+ SNV + NI+GTS+ IP
Sbjct: 340 DIIMKNVTNPIIINQDYCDRVEACPEQKSAVQVSNVLYKNIQGTSSRPIAVKFVCSKNIP 399
Query: 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
C+ I + N+ V + + + + CSNVK G P
Sbjct: 400 CRGISMQNVKLVD-----QTQQDVSKASCSNVKLDTRGNVSP 436
Score = 93 (37.8 bits), Expect = 2.7e-21, Sum P(2) = 2.7e-21
Identities = 20/33 (60%), Positives = 22/33 (66%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGI 34
FNV FGA A+G DDSKAF AW AC+ GI
Sbjct: 71 FNVNTFGAKANG-NDDSKAFMKAWEAACSSTGI 102
>TAIR|locus:2146370 [details] [associations]
symbol:AT5G27530 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00518530 RefSeq:NP_198105.2 UniGene:At.55039
ProteinModelPortal:F4K4C2 EnsemblPlants:AT5G27530.1 GeneID:832813
KEGG:ath:AT5G27530 OMA:CKSTSIK PhylomeDB:F4K4C2 Uniprot:F4K4C2
Length = 458
Score = 182 (69.1 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 46/116 (39%), Positives = 61/116 (52%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
N+ TI GI S+DS HI+I C+ + ++ + I A +SPNT+GI I S I S I
Sbjct: 172 NNLTINGITSIDSPKSHISIKNCHYVAISKINILAPENSPNTDGIDISYSTNVNIFDSTI 231
Query: 114 ATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
TGDDC+++ GHGISVGSLG + V + V CTF T
Sbjct: 232 QTGDDCIAINTGSSSINITQVNCGPGHGISVGSLGADGENAAVSDVYVTQCTFNKT 287
Score = 112 (44.5 bits), Expect = 0.00089, P = 0.00089
Identities = 52/219 (23%), Positives = 92/219 (42%)
Query: 32 DGIKSAVLVPPGKYLSI-RFNFLNDSTITGIKSVDSRYF-HINILGCYNLKLND--LKIT 87
D KS + + Y++I + N L +D Y ++NI ++ D + I
Sbjct: 183 DSPKSHISIKNCHYVAISKINILAPENSPNTDGIDISYSTNVNIFDS-TIQTGDDCIAIN 241
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLT--- 144
+ S N ++ G +G + S+ A G++ ++ + K N +
Sbjct: 242 TGSSSINITQVNCGPGHGISVG-SLGADGENAAVSDVYVTQCTFNKTTNGARIKTWQGGQ 300
Query: 145 --VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK- 201
RN +F NI NV+NPI+IDQ Y + S V S+V++ +GT+ N+
Sbjct: 301 GYARNISFE--NITLINVQNPIIIDQQYTDKVLLDATKDSAVAISSVKYVGFQGTTLNED 358
Query: 202 ---IPCQNIGIGNINWVYNGVNVKVEGPETTSL-CSNVK 236
+ C I + V + + V +E E + C NV+
Sbjct: 359 AIMLKCSAITYCK-DMVIDDIEVTMENGEKPKVECENVE 396
Score = 102 (41.0 bits), Expect = 3.1e-21, Sum P(2) = 3.1e-21
Identities = 24/63 (38%), Positives = 30/63 (47%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNFLNDSTIT 59
++NV FGA DG DDS AF AW C + + + +P GK YL F T
Sbjct: 52 IYNVLKFGAEGDGQTDDSNAFLQAWNATCGGEENINTLFIPSGKTYLLQPIEFKGPCKST 111
Query: 60 GIK 62
IK
Sbjct: 112 SIK 114
>TAIR|locus:2043924 [details] [associations]
symbol:AT2G43870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002685 GO:GO:0005975 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AC002333
EMBL:DQ446620 IPI:IPI00544593 PIR:E84871 RefSeq:NP_181915.1
UniGene:At.53114 HSSP:P26509 ProteinModelPortal:O22817 SMR:O22817
EnsemblPlants:AT2G43870.1 GeneID:818991 KEGG:ath:AT2G43870
TAIR:At2g43870 InParanoid:O22817 OMA:KTTWFTG PhylomeDB:O22817
ProtClustDB:CLSN2716978 ArrayExpress:O22817 Genevestigator:O22817
Uniprot:O22817
Length = 384
Score = 249 (92.7 bits), Expect = 4.2e-21, P = 4.2e-21
Identities = 59/145 (40%), Positives = 85/145 (58%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A WD KS P G +I F ++ ++G+ S++S+ FH+ I GC N+KL +K
Sbjct: 122 RGASLWDCKKSGKNCPSGA-TTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVK 180
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG----------------HGISVG 129
+ A +SPNT+GIH+ SS+ I ++ I+TGDDCVS+G HGIS+G
Sbjct: 181 VLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIG 240
Query: 130 SLGKGINDEEVVGLTVRNCTFTGTN 154
SLGK + V +TV+ TFTGT+
Sbjct: 241 SLGKDSVESGVQNVTVKTVTFTGTD 265
Score = 126 (49.4 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 46/144 (31%), Positives = 72/144 (50%)
Query: 71 INILGCYNLKLNDLKITAHAD----SPNTEGIHIGS-SNGSEISHSVIATGDDCVSLG-H 124
I++ ++ + + KI+ D P T G+ I + + G S+ + G D V G
Sbjct: 193 IHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKDSVESGVQ 252
Query: 125 GISVGSLGKGINDEEV-VGLTVRNCTFTGTNI-----VTNNVENPIVIDQLYCPYNKCNI 178
++V ++ D V + R + NI V NNVENPI+IDQ YCP + C
Sbjct: 253 NVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIIIDQNYCPDHDCPR 312
Query: 179 KVPSQVKTSNVRFNNIRGTSANKI 202
+V S +K S+V F +I GTSA ++
Sbjct: 313 QV-SGIKISDVLFVDIHGTSATEV 335
Score = 88 (36.0 bits), Expect = 7.8e-11, Sum P(2) = 7.8e-11
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFN 51
+NV FGA DG D +KAF W+ AC ++VP G++L S+ F+
Sbjct: 21 YNVLSFGAKPDGKTDATKAFMAVWQTACA-SSRPVTIVVPKGRFLLRSVTFD 71
>TAIR|locus:2026795 [details] [associations]
symbol:AT1G70500 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AC010796 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 IPI:IPI00520664
PIR:H96728 RefSeq:NP_177207.1 UniGene:At.52467
ProteinModelPortal:Q9CAL5 SMR:Q9CAL5 PRIDE:Q9CAL5
EnsemblPlants:AT1G70500.1 GeneID:843386 KEGG:ath:AT1G70500
TAIR:At1g70500 InParanoid:Q9CAL5 OMA:TIQSCRI PhylomeDB:Q9CAL5
ProtClustDB:CLSN2682788 Genevestigator:Q9CAL5 Uniprot:Q9CAL5
Length = 468
Score = 146 (56.5 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 36/112 (32%), Positives = 58/112 (51%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G+ +S+ H+ I ++++ + +T+ DSPNT+GIHI +S + S I+TGD
Sbjct: 203 VRGLTIRNSQQMHLIIQRSTTVRISRVMVTSPGDSPNTDGIHITASTDVVVQDSKISTGD 262
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
DCVS+ GHGIS+GSLG+G + V + + T
Sbjct: 263 DCVSIVNGSAKIKMKRIYCGPGHGISIGSLGQGHSKGTVTAVVLETAFLKNT 314
Score = 104 (41.7 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 154 NIVTNNVENPIVIDQLYCPY-NKCNIKVPSQVKTSNVRFNNIRGTS----------ANKI 202
N+V +V NPI+IDQ YC + C + S V S + + NI GT+ ++ +
Sbjct: 337 NVVMQDVANPIIIDQFYCDSPSTCQNQT-SAVHISEIMYRNITGTTKSSKAINFKCSDAV 395
Query: 203 PCQNIGIGNINWVYNGVNVKVE 224
PC +I + NIN G + KVE
Sbjct: 396 PCSHIVLNNIN--LEGNDGKVE 415
Score = 93 (37.8 bits), Expect = 5.9e-21, Sum P(3) = 5.9e-21
Identities = 21/45 (46%), Positives = 27/45 (60%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL 46
NV F A DG+ DD++AF AW AC+ S +LVP G+ YL
Sbjct: 68 NVDSFNASGDGVSDDTQAFIRAWTMACS--APNSVLLVPQGRSYL 110
>TAIR|locus:2080422 [details] [associations]
symbol:AT3G59850 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 KO:K01184 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
ProtClustDB:CLSN2716978 EMBL:BT015766 EMBL:BT020180 IPI:IPI00538167
RefSeq:NP_191544.2 UniGene:At.34545 ProteinModelPortal:Q5XF50
STRING:Q5XF50 EnsemblPlants:AT3G59850.1 GeneID:825155
KEGG:ath:AT3G59850 TAIR:At3g59850 InParanoid:Q5XF50 OMA:WAKACAS
PhylomeDB:Q5XF50 Genevestigator:Q5XF50 Uniprot:Q5XF50
Length = 388
Score = 247 (92.0 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 59/139 (42%), Positives = 82/139 (58%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS P G SI F + I+G+ S++S+ FH+ I GC N+KL+ +K++A
Sbjct: 129 WSCKKSGKNCPSGA-TSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADG 187
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKG 134
+SPNT+GIH+ SS+ I +S I+TGDDCVS+G HGIS+GSLGK
Sbjct: 188 NSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKE 247
Query: 135 INDEEVVGLTVRNCTFTGT 153
+ V +TV+ TFTGT
Sbjct: 248 SVEVGVQNITVKTATFTGT 266
Score = 135 (52.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 60/182 (32%), Positives = 81/182 (44%)
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVI-ATGDDCVSLG--HGISVGSLGKGINDE 138
N L I A P GI IGS + V T G +G+ + S + N
Sbjct: 224 NGLWIENVACGPG-HGISIGSLGKESVEVGVQNITVKTATFTGTENGVRIKSWARPSN-- 280
Query: 139 EVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNK-CNIKVPSQVKTSNVRFNNIRGT 197
G +N F + V NNV+NPIVIDQ YCP N+ C +V S +K S+V F +I GT
Sbjct: 281 ---GFA-KNIRFQ--HCVMNNVQNPIVIDQNYCPGNENCPNQV-SGIKISDVMFFDIHGT 333
Query: 198 SANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPAT 247
SA ++ PC I I ++ Y P TT CS+ + G Q P +
Sbjct: 334 SATEVGVKLDCSSKKPCTGIRIQDVKLTYRNK------PATTD-CSHAGGSEAGFQRPNS 386
Query: 248 CV 249
C+
Sbjct: 387 CL 388
>TAIR|locus:2141877 [details] [associations]
symbol:AT4G18180 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 CAZy:GH28 HOGENOM:HOG000237792
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161548 IPI:IPI00532207 PIR:E85204 RefSeq:NP_193552.1
UniGene:At.54387 ProteinModelPortal:Q9M0M1 SMR:Q9M0M1 PRIDE:Q9M0M1
EnsemblPlants:AT4G18180.1 GeneID:827543 KEGG:ath:AT4G18180
TAIR:At4g18180 InParanoid:Q9M0M1 OMA:HIALVEC PhylomeDB:Q9M0M1
ProtClustDB:PLN02188 ArrayExpress:Q9M0M1 Genevestigator:Q9M0M1
Uniprot:Q9M0M1
Length = 414
Score = 241 (89.9 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 57/130 (43%), Positives = 80/130 (61%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S++F +N + + I SV+S++FHI ++ C + K L ITA +DSPNT+GIHI S+
Sbjct: 156 SLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNV 215
Query: 107 EISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCTF 150
S S IATGDDCVS+G HGISVGSLG+ N+++V GL V++C
Sbjct: 216 YFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKI 275
Query: 151 TGTNIVTNNV 160
+GT TN +
Sbjct: 276 SGT---TNGI 282
Score = 184 (69.8 bits), Expect = 8.6e-21, Sum P(2) = 8.6e-21
Identities = 60/189 (31%), Positives = 91/189 (48%)
Query: 82 NDLKITAHADSPNTEGIHIGS----SNGSEISHSVIATGDDCVSLG--HGISVGSLGKGI 135
+ + IT+ P GI +GS N +++ V+ DC G +GI + +
Sbjct: 236 SQITITSIKCGPG-HGISVGSLGRYPNEKDVNGLVVK---DCKISGTTNGIRIKTWA--- 288
Query: 136 NDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIR 195
N + T N TF NI+ NNV NPI+IDQ YCP++ C VPS+V+ S + F NIR
Sbjct: 289 NSPGLSAAT--NMTFE--NIIMNNVTNPIIIDQSYCPFSSCISNVPSKVELSEIYFKNIR 344
Query: 196 GTSANKI----------PCQNIGIGNINWVYNGVN-----VKVEGPET-TSLCSNVKPTL 239
GTS++ + PC+ + + N++ + + G E +S C NV+
Sbjct: 345 GTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSSNRGNEAVSSSCRNVRANY 404
Query: 240 FGKQIPATC 248
G QIP C
Sbjct: 405 IGTQIPPPC 413
Score = 88 (36.0 bits), Expect = 8.6e-21, Sum P(2) = 8.6e-21
Identities = 26/73 (35%), Positives = 42/73 (57%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFN--FLNDSTI 58
+V+ FGA A+ +D +KAF AW +AC +++P G++ S+RF+ N S +
Sbjct: 36 DVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFSGPCTNVSNL 95
Query: 59 T-GIK-SVD-SRY 68
T +K S D S+Y
Sbjct: 96 TVRVKASTDLSKY 108
Score = 36 (17.7 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 48 IRFNFLNDSTITGIKSVDSR 67
I+F ++N T+TG + D +
Sbjct: 115 IQFGWINGLTLTGGGTFDGQ 134
>TAIR|locus:2222657 [details] [associations]
symbol:AT5G14650 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 KO:K01184 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:AL163792
IPI:IPI00547360 PIR:T48638 RefSeq:NP_196969.1 UniGene:At.31902
ProteinModelPortal:Q9LYJ5 SMR:Q9LYJ5 STRING:Q9LYJ5 PRIDE:Q9LYJ5
EnsemblPlants:AT5G14650.1 GeneID:831317 KEGG:ath:AT5G14650
TAIR:At5g14650 InParanoid:Q9LYJ5 OMA:NYINIKG PhylomeDB:Q9LYJ5
ProtClustDB:CLSN2916713 Genevestigator:Q9LYJ5 Uniprot:Q9LYJ5
Length = 435
Score = 181 (68.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 48/146 (32%), Positives = 74/146 (50%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W+ + + P K ++RF N T++GI +S H+ C +++++D ++
Sbjct: 158 WNDMMGTKM-PRTKPTALRFYGSNGVTVSGITIQNSPQTHLKFDNCISIQVSDFTTSSPG 216
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
DSPNT+GIH+ +S + I S +A GDDC+S+ GHGIS+G LGK
Sbjct: 217 DSPNTDGIHLQNSQDAVIYRSTLACGDDCISIQTGCSNINIHDVDCGPGHGISIGGLGKD 276
Query: 135 INDEEVVGLTVRNCTFTGTNIVTNNV 160
V +TVR+ T T TN V
Sbjct: 277 NTKACVSNITVRDVTMHET---TNGV 299
Score = 109 (43.4 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 42/150 (28%), Positives = 67/150 (44%)
Query: 75 GCYNLKLNDLKITAHADSPNTEGIHIGS--SNGSEISHSVIATGDDCV-SLGHGISVGSL 131
GC N+ ++D+ D GI IG + ++ S I D + +G+ + S
Sbjct: 251 GCSNINIHDV------DCGPGHGISIGGLGKDNTKACVSNITVRDVTMHETTNGVRIKSW 304
Query: 132 GKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRF 191
G +V+ F+ NI +NV NPI+IDQ YC C+ + S V SN+ +
Sbjct: 305 QGGSG-------SVKQVMFS--NIQVSNVANPIIIDQYYCDGGGCHNET-SAVAVSNINY 354
Query: 192 NNIRGT---------SANKIPCQNIGIGNI 212
NI+GT ++ +PC I + I
Sbjct: 355 INIKGTYTKEPVRFACSDSLPCTGISLSTI 384
Score = 100 (40.3 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 22/41 (53%), Positives = 25/41 (60%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
NV D GA DG DD+KAFE AW+ AC S +LVP G
Sbjct: 52 NVLDHGAKGDGTSDDTKAFEDAWQVACKVAA--STLLVPSG 90
>TAIR|locus:2028844 [details] [associations]
symbol:AT1G23460 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00538330 RefSeq:NP_173760.2
UniGene:At.49907 ProteinModelPortal:F4I672 SMR:F4I672 PRIDE:F4I672
EnsemblPlants:AT1G23460.1 GeneID:838954 KEGG:ath:AT1G23460
OMA:HITESTN Uniprot:F4I672
Length = 460
Score = 125 (49.1 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 31/92 (33%), Positives = 50/92 (54%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
++G+ +S+ + I +++++ + +++ DSPNT+GIHI S + I TGD
Sbjct: 203 VSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNVILQDCKIGTGD 262
Query: 118 DCVSL----------------GHGISVGSLGK 133
DCVS+ GHGIS+GSLGK
Sbjct: 263 DCVSIVNASSNIKMKNIYCGPGHGISIGSLGK 294
Score = 113 (44.8 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL--SIRFN 51
NV FGA DG+ DD++AF +AW +AC+ KS LVP G+ YL + +FN
Sbjct: 68 NVDTFGAAGDGVSDDTQAFVSAWSKACSTS--KSVFLVPEGRRYLVNATKFN 117
Score = 107 (42.7 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 153 TNIVTNNVENPIVIDQLYCPY-NKCNIKVPSQVKTSNVRFNNIRGTS----ANKIPCQN- 206
TN+ +V NPI+IDQ YC C + S VK S + + NI GT+ A K C +
Sbjct: 336 TNVEMQDVANPILIDQFYCDSPTTCQNQT-SAVKISQIMYRNITGTTKSAKAIKFACSDT 394
Query: 207 IGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP-ATCV 249
+ +I V N VN++ + + C++ + +G P A C+
Sbjct: 395 VPCSHI--VLNNVNLEGNDGQVEAYCNSAEGFGYGVIHPSADCL 436
>TAIR|locus:2128023 [details] [associations]
symbol:AT4G35670 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00518919 RefSeq:NP_195292.2
UniGene:At.54617 ProteinModelPortal:F4JN47 SMR:F4JN47
EnsemblPlants:AT4G35670.1 GeneID:829719 KEGG:ath:AT4G35670
OMA:DSTNINI Uniprot:F4JN47
Length = 394
Score = 176 (67.0 bits), Expect = 8.2e-20, Sum P(2) = 8.2e-20
Identities = 44/112 (39%), Positives = 60/112 (53%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I GI S+DS HI+I C + ++++ + A SPNT+GI I S I S I TGD
Sbjct: 157 INGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDISDSTNINIFDSTIQTGD 216
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
DC+++ GHGISVGSLG G + +V + V +CTF T
Sbjct: 217 DCIAINSGSSNINITGINCGPGHGISVGSLGAGGAEAKVSDVQVTHCTFNQT 268
Score = 114 (45.2 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 47/150 (31%), Positives = 72/150 (48%)
Query: 60 GIKSVDSRYFHINILGCYNLKLND--LKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
GI DS +INI ++ D + I + + + N GI+ G +G + S+ A G
Sbjct: 196 GIDISDST--NINIFDS-TIQTGDDCIAINSGSSNINITGINCGPGHGISVG-SLGAGGA 251
Query: 118 DC----VSLGHGISVGSLGKGINDEEVVGLT--VRNCTFTGTNIVTNNVENPIVIDQLYC 171
+ V + H + G + +G RN +FT +V N +NPI+IDQ Y
Sbjct: 252 EAKVSDVQVTH-CTFNQTTNGARIKTWLGGQGYARNISFTDITLV--NTKNPIIIDQHYI 308
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANK 201
+K + S V SNV+F + RGTS+NK
Sbjct: 309 --DKGRLTEESAVAISNVKFVDFRGTSSNK 336
Score = 105 (42.0 bits), Expect = 8.2e-20, Sum P(2) = 8.2e-20
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
+NV +F A DG DDS+AF AW AC DG +L+P GK
Sbjct: 24 YNVLNFDAKGDGQTDDSEAFLQAWTAACGGDGDIKTLLIPSGK 66
>TAIR|locus:2036581 [details] [associations]
symbol:AT1G60590 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0016556
"mRNA modification" evidence=RCA] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AC002292 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 HSSP:P26213
IPI:IPI00529839 PIR:B96631 RefSeq:NP_564758.2 UniGene:At.27368
ProteinModelPortal:O22699 SMR:O22699 EnsemblPlants:AT1G60590.1
GeneID:842353 KEGG:ath:AT1G60590 TAIR:At1g60590 InParanoid:O22699
OMA:PANGSRH PhylomeDB:O22699 ProtClustDB:CLSN2680767
Genevestigator:O22699 Uniprot:O22699
Length = 540
Score = 172 (65.6 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 43/130 (33%), Positives = 67/130 (51%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF D T+TGI +S H+ C + ++D+ +++ DSPNT+GIH
Sbjct: 270 MPSIKPTALRFYGSIDVTVTGITIQNSPQCHLKFDNCVKVLVHDVNVSSPGDSPNTDGIH 329
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ ++ I + +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 330 LQNTRDVMIHTTTLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDSTKACVSNI 389
Query: 144 TVRNCTFTGT 153
TVR+ T
Sbjct: 390 TVRDVVMHNT 399
Score = 115 (45.5 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
FNV DFGA DG+ DD++AFE AW AC + S +++PP
Sbjct: 123 FNVLDFGAKGDGMSDDTQAFEAAWASACKVEA--STMIIPP 161
Score = 95 (38.5 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 39/125 (31%), Positives = 59/125 (47%)
Query: 75 GCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIA--TGDDCVSLGHGISVGSLG 132
GC N+ ++++ P GI IGS G + + + ++ T D V H G
Sbjct: 355 GCSNVYVHNVNC-----GPG-HGISIGSL-GKDSTKACVSNITVRDVVM--HNTMTGVRI 405
Query: 133 KGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFN 192
K + +G +V+ F+ NI V+ PIVIDQ YC ++KC + S V V +
Sbjct: 406 K--TWQGGIG-SVKGILFS--NIQLTEVQLPIVIDQFYCDHSKC-MNHTSAVSVEGVTYE 459
Query: 193 NIRGT 197
IRGT
Sbjct: 460 KIRGT 464
>TAIR|locus:2031953 [details] [associations]
symbol:AT1G05650 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC007153 IPI:IPI00525299 PIR:F86190 RefSeq:NP_172056.1
UniGene:At.51492 ProteinModelPortal:Q9SYK6 SMR:Q9SYK6 PaxDb:Q9SYK6
PRIDE:Q9SYK6 EnsemblPlants:AT1G05650.1 GeneID:837072
KEGG:ath:AT1G05650 TAIR:At1g05650 InParanoid:Q9SYK6 OMA:TRNFLIS
PhylomeDB:Q9SYK6 ProtClustDB:PLN02155 Genevestigator:Q9SYK6
Uniprot:Q9SYK6
Length = 394
Score = 232 (86.7 bits), Expect = 4.5e-19, P = 4.5e-19
Identities = 51/139 (36%), Positives = 79/139 (56%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS PPG SI FN D I+G+KS++S+ H+ + GC N+ + ++++ A
Sbjct: 132 WSCRKSGQNCPPG-VRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNIRLVAPG 190
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKG 134
DSPNT+G + S G ++ S + TGDDCV++G HG+S+GSL K
Sbjct: 191 DSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGVSIGSLAKQ 250
Query: 135 INDEEVVGLTVRNCTFTGT 153
+N++ V +TV + FTG+
Sbjct: 251 LNEDGVENVTVSSSVFTGS 269
Score = 153 (58.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 77/267 (28%), Positives = 113/267 (42%)
Query: 2 FN-VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS---IRFNFLNDST 57
FN KD + G+K + C +++ LV PG + F T
Sbjct: 150 FNSAKD--VIISGVKSMNSQVSHMTLNGCTNVAVRNIRLVAPGDSPNTDGFTVQFSTGVT 207
Query: 58 ITGIKSVDSRYFHINI-LGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG 116
+TG +V + + I G N ++ L A P G+ IGS ++ + G
Sbjct: 208 LTG-STVQTGDDCVAIGQGTRNFLISKL-----ACGPG-HGVSIGS-----LAKQLNEDG 255
Query: 117 DDCVSLGHGISVGSL-GKGIND--EEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPY 173
+ V++ + GS G I G VRN F N++ NV+NPI+IDQ YCP
Sbjct: 256 VENVTVSSSVFTGSQNGVRIKSWARPSTGF-VRNVFFQ--NLIMRNVQNPIIIDQNYCPS 312
Query: 174 NK-CNIKVPSQVKTSNVRFNNIRGTSAN----KI------PCQNIGIGNINWVYNGVNVK 222
N+ C + S VK + V + NI+GTSA K+ PC I + +I YN
Sbjct: 313 NQGCPTE-HSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTYN----- 366
Query: 223 VEGPETTSLCSNVKPTLFGKQIPATCV 249
+G TSLC N G P +C+
Sbjct: 367 -KGTPATSLCFNAVGKNLGVIQPTSCL 392
>TAIR|locus:2088842 [details] [associations]
symbol:AT3G26610 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:X98130
EMBL:AB028611 EMBL:AK117620 IPI:IPI00530630 RefSeq:NP_189293.1
UniGene:At.37184 ProteinModelPortal:Q38958 SMR:Q38958
EnsemblPlants:AT3G26610.1 GeneID:822270 KEGG:ath:AT3G26610
TAIR:At3g26610 InParanoid:Q38958 OMA:QWLNFKW PhylomeDB:Q38958
ProtClustDB:CLSN2684866 Genevestigator:Q38958 Uniprot:Q38958
Length = 470
Score = 177 (67.4 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 42/110 (38%), Positives = 62/110 (56%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+PP K ++RF N+ T+ I V+S H+ +K+N++ I++ +SPNT+GIH
Sbjct: 188 IPPMKPTALRFYSSNNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNTDGIH 247
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGK 133
+ ++ EI HS IA GDDCVS+ GHGIS+G LGK
Sbjct: 248 LQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGK 297
Score = 128 (50.1 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 53/188 (28%), Positives = 84/188 (44%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDD----CVS--LGHGISVGSL 131
N+ D ++ S N HI G IS + G D CVS + IS+ +
Sbjct: 260 NIACGDDCVSIQTGSSNVHIHHINCGPGHGIS--IGGLGKDKSVACVSDIIVEDISIQNT 317
Query: 132 GKGINDEEVVG-L-TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
G+ + G L V+N TF+ NI +V+ PIVIDQ YC +KC + + V S V
Sbjct: 318 LAGVRIKTWQGGLGVVKNLTFS--NIQVKDVKVPIVIDQYYCDKSKCKNQTRA-VSISGV 374
Query: 190 RFNNIRGT---------SANKIPCQNIGIGNINW-VYNGVNVKVEGPETTSLCSNVKPTL 239
++NNI G+ +N +PC ++ + +I G+ + +LC N
Sbjct: 375 KYNNIVGSFTVQPVRIACSNNVPCMDVDLMDIRLRPSGGIRGLQTHQQQQALCWNSYGKT 434
Query: 240 FGKQIPAT 247
G +P++
Sbjct: 435 QGPLVPSS 442
Score = 99 (39.9 bits), Expect = 4.8e-19, Sum P(2) = 4.8e-19
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
VFN+ +GA DG+ DDSKA AW+ AC G K V +P G ++
Sbjct: 66 VFNIFSYGAKGDGVSDDSKALVGAWKAACKVVGGK--VEIPAGTQFLVK 112
>TAIR|locus:2031963 [details] [associations]
symbol:AT1G05660 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC007153 ProtClustDB:PLN02155 IPI:IPI00535049 PIR:G86190
RefSeq:NP_172057.1 UniGene:At.51493 UniGene:At.69599
ProteinModelPortal:Q9SYK7 SMR:Q9SYK7 EnsemblPlants:AT1G05660.1
GeneID:837073 KEGG:ath:AT1G05660 TAIR:At1g05660 InParanoid:Q9SYK7
OMA:CPTHEGC PhylomeDB:Q9SYK7 Genevestigator:Q9SYK7 Uniprot:Q9SYK7
Length = 394
Score = 231 (86.4 bits), Expect = 5.9e-19, P = 5.9e-19
Identities = 51/139 (36%), Positives = 78/139 (56%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS PPG SI FN D I+G+KS++S+ H+ + GC N+ + ++K+ A
Sbjct: 132 WSCRKSGQNCPPG-VRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAPG 190
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKG 134
+SPNT+G H+ S G + S + TGDDCV++G HG+S+GSL K
Sbjct: 191 NSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSLAKE 250
Query: 135 INDEEVVGLTVRNCTFTGT 153
+ ++ V +TV + FTG+
Sbjct: 251 LKEDGVENVTVSSSVFTGS 269
Score = 142 (55.0 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 59/181 (32%), Positives = 80/181 (44%)
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVI--ATGDDCVSLG--HGISVGSLGKGINDE 138
+L IT A P G+ IGS E+ + T V G +G+ + S + N
Sbjct: 228 NLLITKLACGPG-HGVSIGSL-AKELKEDGVENVTVSSSVFTGSQNGVRIKSWARPSN-- 283
Query: 139 EVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS 198
G VR F ++V NVENPI+IDQ YCP ++ S VK S V + NI+GTS
Sbjct: 284 ---GF-VRTVFFQ--DLVMKNVENPIIIDQNYCPTHEGCPNEYSGVKISQVTYKNIQGTS 337
Query: 199 AN----KI------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
A K+ PC I + +I YN +G TS C N G P +C
Sbjct: 338 ATQEAMKLVCSKSSPCTGITLQDIKLTYN------KGTPATSFCFNAVGKSLGVIQPTSC 391
Query: 249 V 249
+
Sbjct: 392 L 392
Score = 97 (39.2 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV FGA DG+ D + AF AW+ AC + V+VP G +L
Sbjct: 27 VFNVVSFGAKPDGVTDSTGAFLKAWQGACV-SASSATVVVPKGTFL 71
>TAIR|locus:2019963 [details] [associations]
symbol:AT1G10640 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GO:GO:0005576 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829 IPI:IPI00531466
RefSeq:NP_563875.6 UniGene:At.16555 ProteinModelPortal:F4I5U6
SMR:F4I5U6 PRIDE:F4I5U6 EnsemblPlants:AT1G10640.1 GeneID:837607
KEGG:ath:AT1G10640 OMA:HSTTLAC Uniprot:F4I5U6
Length = 532
Score = 158 (60.7 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 41/130 (31%), Positives = 66/130 (50%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF+ +TGI +S H+ C + ++D+ +++ DSPNT+GIH
Sbjct: 263 MPSIKPTALRFSGSFGVEVTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIH 322
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ ++ I + +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 323 LQNTKDVLIHSTTLACGDDCISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNI 382
Query: 144 TVRNCTFTGT 153
TVR+ T
Sbjct: 383 TVRDVAMHNT 392
Score = 117 (46.2 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 25/42 (59%), Positives = 28/42 (66%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VFNV DFGA DG DD+KAFE AW AC + S +LVPP
Sbjct: 118 VFNVMDFGAKGDGKCDDTKAFEAAWVAACKIEA--SVMLVPP 157
Score = 92 (37.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 39/125 (31%), Positives = 59/125 (47%)
Query: 75 GCYNLKLNDLKITAHADSPNTEGIHIGS--SNGSEISHSVIATGDDCVSLGHGISVGSLG 132
GC N+ ++++ P GI IGS G++ S I D V++ H G
Sbjct: 348 GCSNVFVHNVNC-----GPG-HGISIGSLGKEGTKACVSNITVRD--VAM-HNTMTGVRI 398
Query: 133 KGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFN 192
K + VG +V+ F+ NI N V+ PI I+Q YC ++KC + S V V +
Sbjct: 399 K--TWQGGVG-SVKGIIFS--NIQLNQVQIPITINQFYCDHSKCKNQT-SAVAVEGVTYE 452
Query: 193 NIRGT 197
I+GT
Sbjct: 453 RIKGT 457
>TAIR|locus:2016239 [details] [associations]
symbol:AT1G80140 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 IPI:IPI00526406 RefSeq:NP_178131.1 UniGene:At.52577
ProteinModelPortal:F4HS31 SMR:F4HS31 EnsemblPlants:AT1G80140.1
GeneID:844354 KEGG:ath:AT1G80140 OMA:GIHITSS Uniprot:F4HS31
Length = 336
Score = 210 (79.0 bits), Expect = 6.3e-17, P = 6.3e-17
Identities = 49/128 (38%), Positives = 74/128 (57%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
PG ++ F+ + T+ ++ +S H+ ++G N+ ++D+KIT+ SPNT+GIHI
Sbjct: 88 PGPMMT--FSNCGNVTLKSLRFRNSAQTHVLVMGSQNVYIDDIKITSPEASPNTDGIHIT 145
Query: 102 SSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTV 145
SS I+HS IATGDDCVS+G HG+S+GSLG+G + V + V
Sbjct: 146 SSTAVSINHSDIATGDDCVSIGDQVNNLNVTFMNCGPGHGVSIGSLGRGGTEVTVENIRV 205
Query: 146 RNCTFTGT 153
+ FTGT
Sbjct: 206 SHVNFTGT 213
>TAIR|locus:2156314 [details] [associations]
symbol:AT5G44830 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002688
GO:GO:0005576 GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
HOGENOM:HOG000237792 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AB016874 ProtClustDB:CLSN2687281
IPI:IPI00516336 RefSeq:NP_199296.1 UniGene:At.55365
ProteinModelPortal:Q9FIY9 SMR:Q9FIY9 STRING:Q9FIY9
EnsemblPlants:AT5G44830.1 GeneID:834513 KEGG:ath:AT5G44830
TAIR:At5g44830 InParanoid:Q9FIY9 OMA:INTNDAN PhylomeDB:Q9FIY9
Genevestigator:Q9FIY9 Uniprot:Q9FIY9
Length = 332
Score = 195 (73.7 bits), Expect = 3.2e-15, P = 3.2e-15
Identities = 48/123 (39%), Positives = 67/123 (54%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ F ND I GI S +S HI+I C ++L +K+ A DSPNT+GI+I S+ +
Sbjct: 88 LHFQRCNDLKIIGITSFNSPRNHISISECKRVQLTKIKLVAPEDSPNTDGINISGSSDVD 147
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
+ + I TGDDCV++ GHGISVGSLG+ + V + V NCTF
Sbjct: 148 VYDTFIGTGDDCVAINNGSVNINITRMNCGPGHGISVGSLGRDGEESIVENVQVTNCTFF 207
Query: 152 GTN 154
T+
Sbjct: 208 RTD 210
>TAIR|locus:2054396 [details] [associations]
symbol:PGAZAT "polygalacturonase abscission zone A.
thaliana" species:3702 "Arabidopsis thaliana" [GO:0004650
"polygalacturonase activity" evidence=IEA;ISS;IDA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] [GO:0009830 "cell wall
modification involved in abscission" evidence=RCA;TAS] [GO:0009901
"anther dehiscence" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010227 "floral organ abscission" evidence=IMP]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005618
GO:GO:0005576 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005975
EMBL:AC002339 CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792
ProtClustDB:PLN02218 GO:GO:0004650 GO:GO:0009901 GO:GO:0009830
GO:GO:0010047 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AY078936 EMBL:AF083793 IPI:IPI00518873 PIR:H84846
RefSeq:NP_850359.1 UniGene:At.42781 ProteinModelPortal:Q8RY29
SMR:Q8RY29 STRING:Q8RY29 EnsemblPlants:AT2G41850.1 GeneID:818785
KEGG:ath:AT2G41850 GeneFarm:30 TAIR:At2g41850 InParanoid:Q8RY29
OMA:QINDITC PhylomeDB:Q8RY29 Genevestigator:Q8RY29 GO:GO:0010227
Uniprot:Q8RY29
Length = 433
Score = 196 (74.1 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 48/149 (32%), Positives = 78/149 (52%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ET W+ +C + K P ++ F + +K +++ I+I C N+++
Sbjct: 173 ETWWQNSCKRNKAKPCTKAPT----ALTFYNSKSLIVKNLKVRNAQQIQISIEKCSNVQV 228
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+++ +TA ADSPNT+GIHI ++ +S S+I TGDDC+S+ GHG
Sbjct: 229 SNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPGHG 288
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGTN 154
IS+GSLG + V G+TV +GT+
Sbjct: 289 ISIGSLGDDNSKAFVSGVTVDGAKLSGTD 317
Score = 129 (50.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 52/151 (34%), Positives = 74/151 (49%)
Query: 75 GCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHGISVGSLGKG 134
G N+++ND IT P GI IGS G + S + ++ G V++ G + G
Sbjct: 272 GSQNVQIND--ITC---GPG-HGISIGSL-GDDNSKAFVS-G---VTVD-GAKLSGTDNG 319
Query: 135 INDEEVVGL--TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFN 192
+ + G T N F NI +NV+NPI+IDQ YC +KC + S V+ NV +
Sbjct: 320 VRIKTYQGGSGTASNIIFQ--NIQMDNVKNPIIIDQDYCDKSKCTTE-KSAVQVKNVVYR 376
Query: 193 NIRGTSA--NKI--------PCQNIGIGNIN 213
+I GTSA N I PCQ I + +N
Sbjct: 377 DISGTSASENAITFNCSKNYPCQGIVLDRVN 407
Score = 103 (41.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL 46
+V DFGA DG DD++AF AW++AC+ +G + +LVP G YL
Sbjct: 69 SVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVN-LLVPKGNTYL 112
>TAIR|locus:504955462 [details] [associations]
symbol:AT4G32375 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005975 "carbohydrate
metabolic process" evidence=IEA;ISS] InterPro:IPR000743
Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00531203 RefSeq:NP_680757.1 UniGene:At.54578
ProteinModelPortal:F4JUA4 SMR:F4JUA4 PRIDE:F4JUA4
EnsemblPlants:AT4G32375.1 GeneID:829372 KEGG:ath:AT4G32375
OMA:KPPTMFP Uniprot:F4JUA4
Length = 486
Score = 191 (72.3 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 45/123 (36%), Positives = 70/123 (56%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I F+ ++ G+ ++S HI+IL C N+ L++ + A DSPNT+GI I SN
Sbjct: 110 TIGFSGSSNILYNGLTQMNSPKNHISILDCTNVTLSNFHLIAPKDSPNTDGIDIAHSNNI 169
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +S I TGDDC+++ GHGIS+GSLG+ ++ V + +R+C+F
Sbjct: 170 RIFNSSIQTGDDCIAINGGSYDINITHVACGPGHGISIGSLGRYSVNDTVQNVKIRHCSF 229
Query: 151 TGT 153
GT
Sbjct: 230 NGT 232
>TAIR|locus:2103478 [details] [associations]
symbol:ADPG1 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS;IDA]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0009830
"cell wall modification involved in abscission" evidence=RCA;TAS]
[GO:0009901 "anther dehiscence" evidence=IMP] [GO:0010047 "fruit
dehiscence" evidence=IMP] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
GO:GO:0005737 GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005576 GO:GO:0005975 EMBL:AF037367 EMBL:AJ002532
EMBL:AL133248 EMBL:AK117942 EMBL:BT005376 IPI:IPI00526588
PIR:T46187 RefSeq:NP_191310.1 UniGene:At.26895
ProteinModelPortal:O23147 SMR:O23147 STRING:O23147 CAZy:GH28
PaxDb:O23147 PRIDE:O23147 EnsemblPlants:AT3G57510.1 GeneID:824918
KEGG:ath:AT3G57510 GeneFarm:24 TAIR:At3g57510 eggNOG:COG5434
HOGENOM:HOG000237792 InParanoid:O23147 KO:K01184 OMA:KNVVYKN
PhylomeDB:O23147 ProtClustDB:PLN02218 Genevestigator:O23147
GO:GO:0004650 GO:GO:0009901 GO:GO:0009830 GO:GO:0010047
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 Uniprot:O23147
Length = 431
Score = 181 (68.8 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 46/146 (31%), Positives = 76/146 (52%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
+T W+ +C D K P L +N L + + ++ +++ I+I C +++
Sbjct: 173 KTWWQNSCKIDKSKPCTKAPTALTL---YN-LKNLNVKNLRVKNAQQIQISIEKCNKVEV 228
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
++++ITA DSPNT+GIHI ++ +S+S I TGDDC+S+ GHG
Sbjct: 229 SNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHG 288
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFT 151
IS+GSLG + V G+ V F+
Sbjct: 289 ISIGSLGDDNSKAYVSGINVDGAKFS 314
Score = 129 (50.5 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 59/174 (33%), Positives = 78/174 (44%)
Query: 75 GCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHGISVGSLGKG 134
G NL++ DL P GI IGS G + S + ++ G + V G S G
Sbjct: 272 GTQNLQIFDLTC-----GPG-HGISIGSL-GDDNSKAYVS-GIN-VD-GAKFSESDNGVR 321
Query: 135 INDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNI 194
I + T +N F NI NV+NPI+IDQ YC +KC + S V+ NV + NI
Sbjct: 322 IKTYQGGSGTAKNIKFQ--NIRMENVKNPIIIDQDYCDKDKCEDQ-ESAVQVKNVVYKNI 378
Query: 195 RGTSAN----------KIPCQNIGIGNINWVYNGV----NVKVEGPETTS-LCS 233
GTSA K PCQ I + N+ + G N V+ T S CS
Sbjct: 379 SGTSATDVAITLNCSEKYPCQGIVLENVK-IKGGTASCKNANVKNQGTVSPKCS 431
Score = 115 (45.5 bits), Expect = 0.00037, P = 0.00037
Identities = 62/219 (28%), Positives = 97/219 (44%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL--SIRFN----FLND 55
+V +FGA DG DD++AF+ AW++AC+ +G+ + LVP GK YL S RF L +
Sbjct: 69 SVSNFGAKGDGKTDDTQAFKKAWKKACSTNGV-TTFLVPKGKTYLLKSTRFRGPCKSLRN 127
Query: 56 STITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIAT 115
I G S ++ + L L D+ D +T GI G+ + I
Sbjct: 128 FQILGTLSASTKRSDYKDKNHW-LILEDVN-NLSIDGGST-GIINGNGKTWWQNSCKIDK 184
Query: 116 GDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVT-NNVENPIVIDQLYCPYN 174
C +++ +L K +N V L V+N +I N VE V ++ P +
Sbjct: 185 SKPCTKAPTALTLYNL-KNLN---VKNLRVKNAQQIQISIEKCNKVEVSNV--EITAPGD 238
Query: 175 KCNIKVPSQVKTSNVRFNNIR-GTSANKIPCQNIGIGNI 212
N T N+R +N GT + I ++ G N+
Sbjct: 239 SPNTDGIHITNTQNIRVSNSDIGTGDDCISIED-GTQNL 276
>TAIR|locus:2196055 [details] [associations]
symbol:AT1G02460 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 EMBL:AC022521
CAZy:GH28 eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
HSSP:O74213 EMBL:BT023462 IPI:IPI00548187 PIR:B86155
RefSeq:NP_563654.1 UniGene:At.49842 ProteinModelPortal:Q9FWX5
SMR:Q9FWX5 EnsemblPlants:AT1G02460.1 GeneID:839443
KEGG:ath:AT1G02460 TAIR:At1g02460 InParanoid:Q9FWX5 OMA:CVSIGSG
PhylomeDB:Q9FWX5 ProtClustDB:CLSN2687622 Genevestigator:Q9FWX5
Uniprot:Q9FWX5
Length = 491
Score = 177 (67.4 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 37/92 (40%), Positives = 56/92 (60%)
Query: 35 KSAVLVPP-GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSP 93
KSA++ P +++RF ++ + G++ +S FH GC + + L ITA SP
Sbjct: 212 KSAIVTGPCDSPIALRFFMSSNLRVEGLQIKNSPQFHFRFDGCQGVHVESLHITAPPLSP 271
Query: 94 NTEGIHIGSSNGSEISHSVIATGDDCVSLGHG 125
NT+GIHI +SN I +S+I+ GDDCVS+G G
Sbjct: 272 NTDGIHIENSNSVTIYNSIISNGDDCVSIGSG 303
Score = 115 (45.5 bits), Expect = 0.00045, P = 0.00045
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI-T 59
++NV+ +GAV DG DD++AF+TAW +CN + +VL+ P Y F+ STI T
Sbjct: 88 IYNVRKYGAVGDGETDDTEAFKTAWDSSCNNENNTDSVLLVPYGY-----TFMIQSTIFT 142
Query: 60 G 60
G
Sbjct: 143 G 143
>TAIR|locus:2141345 [details] [associations]
symbol:AT4G01890 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00524879 RefSeq:NP_192098.2 UniGene:At.34358
ProteinModelPortal:F4JG70 SMR:F4JG70 EnsemblPlants:AT4G01890.1
GeneID:828220 KEGG:ath:AT4G01890 OMA:RINGMAL Uniprot:F4JG70
Length = 468
Score = 171 (65.3 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 33/79 (41%), Positives = 52/79 (65%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++RF ++ + G+ +S H+ + GC+ + +N L+I + SPNT+GIHI +SN
Sbjct: 202 ALRFFMSSNVIVKGLSIKNSPQVHLKLDGCHVVHINSLRIISPPASPNTDGIHIENSNSV 261
Query: 107 EISHSVIATGDDCVSLGHG 125
EI +SVI+ GDDCVS+G G
Sbjct: 262 EIYNSVISNGDDCVSIGPG 280
Score = 118 (46.6 bits), Expect = 0.00019, P = 0.00019
Identities = 57/215 (26%), Positives = 96/215 (44%)
Query: 27 EACNWDGIKSA-VLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFH-INI-LGCYNLKLND 83
+ C+ I S ++ PP + + N +++ SV S ++I G Y++ + +
Sbjct: 229 DGCHVVHINSLRIISPPASPNTDGIHIENSNSVEIYNSVISNGDDCVSIGPGAYDIDIRN 288
Query: 84 LKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHG-ISVGSLGKGINDEEVVG 142
IT P GI IGS G + SH+ ++ V++ I G I +
Sbjct: 289 --ITC---GPGGHGISIGSL-GEKNSHACVSN----VTVRDSFIKFSENGVRIKTWQGGS 338
Query: 143 LTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT----- 197
+V TF NI + V NPI+IDQ YC C K S V +++ + +I+GT
Sbjct: 339 GSVSGVTFD--NIHVDTVRNPIIIDQYYCTTKSCANKT-SAVFVNDIVYQSIKGTYDIRS 395
Query: 198 ------SANKIPCQNIGIGNINWVYNGVNVKVEGP 226
+N +PC N+ + NI + + ++ V GP
Sbjct: 396 PPMHFGCSNNVPCTNLTLSNIELLPSKEDIVV-GP 429
>TAIR|locus:2027534 [details] [associations]
symbol:AT1G56710 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 HOGENOM:HOG000237792 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0016829
EMBL:AC009323 IPI:IPI00545331 PIR:A96609 RefSeq:NP_176064.1
UniGene:At.49984 ProteinModelPortal:Q9FXC1 SMR:Q9FXC1 PaxDb:Q9FXC1
PRIDE:Q9FXC1 EnsemblPlants:AT1G56710.1 GeneID:842127
KEGG:ath:AT1G56710 TAIR:At1g56710 InParanoid:Q9FXC1 OMA:CDSPVAI
PhylomeDB:Q9FXC1 ProtClustDB:CLSN2912808 Genevestigator:Q9FXC1
Uniprot:Q9FXC1
Length = 434
Score = 168 (64.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 46/143 (32%), Positives = 71/143 (49%)
Query: 25 WREACN-WDGIKSAVLVPP-GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
W C G+ P ++IR + I GI ++S FH+ C ++ ++
Sbjct: 158 WNLPCKPHKGLNGTTQTGPCDSPVAIRLFQSSKVRIQGINFMNSAQFHVRFDNCSDVVVD 217
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG----------------HGI 126
+ I A A SPNT+GIHI +++ +I +S+I+ GDDC+S+G HGI
Sbjct: 218 SVIIKAPASSPNTDGIHIENTHNVQIRNSMISNGDDCISIGAGCFNVDIKNVTCGPSHGI 277
Query: 127 SVGSLGKGINDEEVVGLTVRNCT 149
S+GSLG + V +TV N T
Sbjct: 278 SIGSLGVHNSQAYVSNITVTNST 300
Score = 113 (44.8 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 47/179 (26%), Positives = 81/179 (45%)
Query: 75 GCYNLKLNDLKI-TAHADSPNTEGIHIGSSNGSEIS--HSVIATGDDCVSLGHGISVGSL 131
GC+N+ + ++ +H S + G+H + S I+ +S I D+ G I
Sbjct: 260 GCFNVDIKNVTCGPSHGISIGSLGVHNSQAYVSNITVTNSTIWNSDN----GVRIKTWQG 315
Query: 132 GKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRF 191
G G +V F+ NI+ NV NPI+IDQ YC N C + S V S+V +
Sbjct: 316 GSG---------SVSRIVFS--NILMVNVRNPIMIDQYYCQTNNCANQT-SAVIISDVLY 363
Query: 192 NNIRGT-----------SANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
NI+GT ++ +PC N+ + ++ ++ +E P + ++K T+
Sbjct: 364 ANIKGTYDLRSPPIHFGCSDSVPCTNLTLTEVD-LFPSKGQHLENPFCWNAYGSMKITV 421
Score = 102 (41.0 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V FGA+ D DD+ AF+ AW AC G KSA+L+ P
Sbjct: 47 VFDVTSFGAIGDCSTDDTSAFKMAWDAACMSTGPKSALLLVP 88
>TAIR|locus:2078531 [details] [associations]
symbol:AT3G42950 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
[GO:0009507 "chloroplast" evidence=ISM] InterPro:IPR000743
Pfam:PF00295 EMBL:CP002686 GO:GO:0005576 GO:GO:0005975 CAZy:GH28
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:AL138654 EMBL:AY050383 IPI:IPI00517878
PIR:T47353 RefSeq:NP_189881.1 UniGene:At.1332
ProteinModelPortal:Q9M1L0 SMR:Q9M1L0 PRIDE:Q9M1L0
EnsemblPlants:AT3G42950.1 GeneID:823351 KEGG:ath:AT3G42950
TAIR:At3g42950 InParanoid:Q9M1L0 OMA:QNIRITN PhylomeDB:Q9M1L0
ProtClustDB:CLSN2682441 Genevestigator:Q9M1L0 Uniprot:Q9M1L0
Length = 484
Score = 106 (42.4 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 42/207 (20%), Positives = 94/207 (45%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA-DSPNTEGIHIGSSNGS 106
++ + +D I DS ++ ++ C N+ + ++ I A ++PNT+GI S
Sbjct: 205 VQIMWSSDIVFANITLRDSPFWTLHPYDCKNVTITNMTILAPVFEAPNTDGIDPDSCEDM 264
Query: 107 EISHSVIATGDDCVSLGHGIS-VGSL-GKGINDEEVVGLTVRNCTFTGTNI---VTNNVE 161
I +S I+ GDD +++ G G+ GK + + L +R+ G +I ++ V
Sbjct: 265 LIENSYISVGDDGIAIKSGWDQYGTTYGKPSKNILIRNLIIRSMVSAGISIGSEMSGGVS 324
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIPCQNIGIGNINWVYNGVNV 221
N I ++ + ++ +++ KT+ R +R + + + +G + + N
Sbjct: 325 N-ITVENILIWSSRRGVRI----KTAPGRGGYVRDITFRNVTLDELRVGIV--IKTDYNE 377
Query: 222 KVEG---PETTSLCSNVKPT-LFGKQI 244
+G P+ + N+ T ++G+ +
Sbjct: 378 HPDGGFNPQAFPILENINYTGIYGQGV 404
Score = 95 (38.5 bits), Expect = 7.6e-09, Sum P(2) = 7.6e-09
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSIRFNFLNDSTI 58
VFN+ DFGAV DG+ +++AFE A + L VPPG++L+ FN + T+
Sbjct: 65 VFNLTDFGAVGDGVTINTEAFEKAIYKISKLAKKGGGQLNVPPGRWLTAPFNLTSYMTL 123
>TAIR|locus:2127821 [details] [associations]
symbol:AT4G32370 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
EMBL:CP002687 GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 IPI:IPI00544475 RefSeq:NP_194963.2
UniGene:At.54577 ProteinModelPortal:F4JUA3
EnsemblPlants:AT4G32370.1 GeneID:829371 KEGG:ath:AT4G32370
OMA:INICLSH PhylomeDB:F4JUA3 Uniprot:F4JUA3
Length = 342
Score = 151 (58.2 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 34/79 (43%), Positives = 48/79 (60%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I F D G+ ++S HI+I GC N L++L I+A DSPNT+GI+I S+
Sbjct: 157 TISFASCMDIVYNGLHHINSPRNHISIYGCTNATLSNLDISAPEDSPNTDGINICLSHRI 216
Query: 107 EISHSVIATGDDCVSLGHG 125
+I S I TGDDCV++ G
Sbjct: 217 QILDSSIQTGDDCVAITGG 235
Score = 107 (42.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 30/84 (35%), Positives = 45/84 (53%)
Query: 71 INILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHGISVGS 130
INI + +++ D I D G G S+I+ + +A G GHGIS+GS
Sbjct: 208 INICLSHRIQILDSSIQTGDDCVAITG---GRGGSSDINITGVACGP-----GHGISIGS 259
Query: 131 LGKGINDEEVV-GLTVRNCTFTGT 153
LGK +++V + VR+C+FTGT
Sbjct: 260 LGKDNERDDIVENVNVRSCSFTGT 283
Score = 57 (25.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 27/79 (34%), Positives = 35/79 (44%)
Query: 1 VFNVKDFGAVADG-IKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFN---FLNDS 56
+ ++KDF + I D S+AF+ AW+ C + P G L IR N L S
Sbjct: 33 ILSIKDFIIDTNHTIIDYSQAFQEAWKGLCEDE-------TPNGSALVIRKNETYTLQPS 85
Query: 57 TITGIKSVDSRYFHINILG 75
T G V S HI I G
Sbjct: 86 TFRG-PCVSSN-IHIQIDG 102
>TAIR|locus:2061396 [details] [associations]
symbol:AT2G23900 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002685
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 EMBL:DQ446556 IPI:IPI00539911 RefSeq:NP_179968.2
UniGene:At.50092 ProteinModelPortal:Q1PF10 SMR:Q1PF10 PRIDE:Q1PF10
EnsemblPlants:AT2G23900.1 GeneID:816922 KEGG:ath:AT2G23900
TAIR:At2g23900 InParanoid:Q1PF10 OMA:NDGCDPE PhylomeDB:Q1PF10
ProtClustDB:CLSN2684221 Genevestigator:Q1PF10 Uniprot:Q1PF10
Length = 477
Score = 116 (45.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 29/103 (28%), Positives = 54/103 (52%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I F + I+ I +DS ++I+ + C N+ + + I A DSPNT+GI+ S +
Sbjct: 195 TIEIIFSQNVQISNITIIDSPAWNIHPVYCNNVIVKGVTILAPIDSPNTDGINPDSCTNT 254
Query: 107 EISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCT 149
I + +GDDC+++ G + G+ ++ L++R T
Sbjct: 255 LIEDCYVVSGDDCIAVKSGWDQFGIKVGMPTQQ---LSIRRLT 294
Score = 79 (32.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 6 DFGAVADGIKDDSKAFETAWREACNW--DGIKSAVLVPPGKYLSIRFNFLNDSTI 58
+FGAV DG ++KAF+ A + DG ++VPPGK+L+ FN + T+
Sbjct: 60 EFGAVGDGKTSNTKAFKEAITKLAPKAADG-GVQLIVPPGKWLTGSFNLTSHFTL 113
>TAIR|locus:2152980 [details] [associations]
symbol:AT5G41870 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005576 GO:GO:0005975 CAZy:GH28
eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AB016871 HSSP:P26509 HOGENOM:HOG000238076 EMBL:BT015129
IPI:IPI00540800 RefSeq:NP_199002.1 UniGene:At.27978
UniGene:At.43191 ProteinModelPortal:Q9FJ27 SMR:Q9FJ27 PaxDb:Q9FJ27
PRIDE:Q9FJ27 EnsemblPlants:AT5G41870.1 GeneID:834192
KEGG:ath:AT5G41870 TAIR:At5g41870 InParanoid:Q9FJ27 OMA:PCAELAT
PhylomeDB:Q9FJ27 ProtClustDB:CLSN2686003 Genevestigator:Q9FJ27
Uniprot:Q9FJ27
Length = 449
Score = 107 (42.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 42/171 (24%), Positives = 83/171 (48%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
I FN + ++ + +S ++ ++ + C N+ ++ + I A DS NT+GI SS+
Sbjct: 185 IEFNNSTNILVSHVVLQNSPFWTLHPVYCSNVVVHHVTILAPTDSYNTDGIDPDSSSNVC 244
Query: 108 ISHSVIATGDDCVSL--G---HGISVGSLGKGINDEEVVGLTVRNCTFTGTNI---VTNN 159
I S I+TGDD V++ G +GI+ + I + G + F G I +
Sbjct: 245 IEDSYISTGDDLVAVKSGWDEYGIAYNRPSRDITIRRITG----SSPFAGIAIGSETSGG 300
Query: 160 VENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIPCQNIGIG 210
++N + ++ + YN I + +KT+ R +I+G + + + + + G
Sbjct: 301 IQN-VTVENITL-YNS-GIGI--HIKTNIGRGGSIQGITISGVYLEKVRTG 346
Score = 81 (33.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL--VPPGKYLSIRFNFLNDSTI 58
+ ++ DFGAV DG ++KAF +A N + L VP G YL+ FN + T+
Sbjct: 44 MLSISDFGAVGDGKTLNTKAFNSAIDRIRNSNNSNEGTLLYVPRGVYLTQSFNLTSHMTL 103
>TAIR|locus:2128524 [details] [associations]
symbol:AT4G23820 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AL161560 EMBL:AL035394 HOGENOM:HOG000238076
ProtClustDB:CLSN2686003 EMBL:AY062697 EMBL:AY128793 IPI:IPI00542449
PIR:T05614 RefSeq:NP_194113.1 UniGene:At.22227 UniGene:At.67753
ProteinModelPortal:Q9SUP5 PaxDb:Q9SUP5 PRIDE:Q9SUP5
EnsemblPlants:AT4G23820.1 GeneID:828482 KEGG:ath:AT4G23820
TAIR:At4g23820 InParanoid:Q9SUP5 OMA:PCTELTS PhylomeDB:Q9SUP5
Genevestigator:Q9SUP5 Uniprot:Q9SUP5
Length = 444
Score = 112 (44.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
I F + I+ + +S +++I+ + C N+ ++ + I A DSPNT+GI SS
Sbjct: 180 IEFKDSKEIIISNVIFQNSPFWNIHPVYCSNVVIHHVTILAPQDSPNTDGIDPDSSYNVC 239
Query: 108 ISHSVIATGDDCVSL--G---HGISVGSLGKGINDEEVVG 142
I S I+TGDD V++ G +GI+ G I + G
Sbjct: 240 IEDSYISTGDDLVAIKSGWDQYGIAYGRPSSNITIRRITG 279
Score = 75 (31.5 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSIRFNFLNDSTI 58
++ DFG V DG ++KAF A + +L +PPG YL+ FN + T+
Sbjct: 42 SITDFGGVGDGRTVNTKAFRAAIYRIQHLKRRGGTLLYIPPGVYLTESFNLTSHMTL 98
>TAIR|locus:2119156 [details] [associations]
symbol:AT4G33440 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 GO:GO:0005576 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0005975 CAZy:GH28 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:BT002785 EMBL:BT004354 IPI:IPI00528054
RefSeq:NP_195070.2 UniGene:At.43591 ProteinModelPortal:Q84K13
PaxDb:Q84K13 PRIDE:Q84K13 EnsemblPlants:AT4G33440.1 GeneID:829481
KEGG:ath:AT4G33440 TAIR:At4g33440 InParanoid:Q84K13 OMA:TRGHLIE
PhylomeDB:Q84K13 ProtClustDB:CLSN2690354 Genevestigator:Q84K13
Uniprot:Q84K13
Length = 475
Score = 110 (43.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 36/147 (24%), Positives = 73/147 (49%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I+ + ++S ++ I+ + C N+ + ++ I A ++PNT+GI SS I I +GD
Sbjct: 221 ISNLTLLNSPFWTIHPVYCSNVVIRNMTILAPMNAPNTDGIDPDSSTNVCIEDCYIESGD 280
Query: 118 DCVSL--G---HGISVGSLGKGINDEEVVGLTVRNCTFTGTNI-VTNNVENPIVIDQLYC 171
D V++ G +G++V I + G T R C+ G ++ + N I ++ ++
Sbjct: 281 DLVAVKSGWDQYGMAVARPSSNIVIRRISG-TTRTCSGVGIGSEMSGGIFN-ITVEDIHV 338
Query: 172 PYNKCNIKVPSQVKT----SNVRFNNI 194
+ +++ + SN+ FNN+
Sbjct: 339 WDSAAGLRIKTDKGRGGYISNITFNNV 365
Score = 77 (32.2 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSIRFNFLNDSTI 58
V ++ DFG V DG ++ AF A R + A L VP G +LS FN ++ T+
Sbjct: 71 VMSITDFGGVGDGKTSNTAAFRRAVRHLEGFAAEGGAQLNVPEGTWLSGSFNLTSNFTL 129
>TAIR|locus:2098038 [details] [associations]
symbol:AT3G62110 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005576
GO:GO:0005975 CAZy:GH28 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000238076 EMBL:AF324992 EMBL:BT000724 IPI:IPI00542616
RefSeq:NP_567126.1 UniGene:At.19142 ProteinModelPortal:Q9FPJ2
SMR:Q9FPJ2 PaxDb:Q9FPJ2 PRIDE:Q9FPJ2 EnsemblPlants:AT3G62110.1
GeneID:825384 KEGG:ath:AT3G62110 TAIR:At3g62110 InParanoid:Q9FPJ2
OMA:YGEHPDE PhylomeDB:Q9FPJ2 ProtClustDB:CLSN2689318
ArrayExpress:Q9FPJ2 Genevestigator:Q9FPJ2 Uniprot:Q9FPJ2
Length = 471
Score = 109 (43.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 41/155 (26%), Positives = 72/155 (46%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I+ + ++S +++I+ + C ++ + +L I A +SPNT+G+ SS I I TGD
Sbjct: 192 ISNLTFLNSPFWNIHPVYCRDVVVKNLTILAPLESPNTDGVDPDSSTNVCIEDCYIVTGD 251
Query: 118 DCVSL--G---HGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCP 172
D VS+ G +GIS I + G T + + ++ V I I L+
Sbjct: 252 DLVSIKSGWDEYGISYARPSSKIKINRLTGQTTSSSGIAIGSEMSGGVSE-IYIKDLHL- 309
Query: 173 YNKCNIKVPSQVKTSNVRFNNIRGTSANKIPCQNI 207
+N N + ++KTS R +R + N+
Sbjct: 310 FNS-NTGI--RIKTSAGRGGYVRNVHILNVKLDNV 341
Score = 73 (30.8 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSIRFNFLNDSTI 58
++ +FGAV DG+ ++KAF+ A ++ A L VP G++L+ F+ ++ T+
Sbjct: 44 SITEFGAVGDGVTLNTKAFQNALFYLNSFSDKGGAKLFVPAGQWLTGSFDLISHLTL 100
>UNIPROTKB|A1CIV8 [details] [associations]
symbol:pgaI "Probable endopolygalacturonase I"
species:344612 "Aspergillus clavatus NRRL 1" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] [GO:0047911 "galacturan
1,4-alpha-galacturonidase activity" evidence=ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
GO:GO:0045490 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:DS027054 KO:K01213 GO:GO:0047911
RefSeq:XP_001272239.1 EnsemblFungi:CADACLAT00004428 GeneID:4703970
KEGG:act:ACLA_052860 HOGENOM:HOG000193107 OrthoDB:EOG46DQBJ
Uniprot:A1CIV8
Length = 368
Score = 128 (50.1 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 47/156 (30%), Positives = 74/156 (47%)
Query: 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI-TAHADSP---NTEGIHIGSSNGSEI 108
L DSTITG+ ++ I++ NL+L D+ I + D NT+ IG SNG I
Sbjct: 140 LRDSTITGLSIKNTPVQAISVQAT-NLQLTDITIDNSDGDENGGHNTDAFDIGESNGVYI 198
Query: 109 SHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
+V+ DDC+++ GHG+S+GS+G G D +V +N T T +
Sbjct: 199 RGAVVKNQDDCIAINSGENIEFSGGSCSGGHGLSIGSVG-G-RDNNIV----KNVTITDS 252
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
I ++ +N + I +Y S +K SN+
Sbjct: 253 TI--SDSDNGVRIKTIYDATGSVGDVTYSNIKLSNI 286
>UNIPROTKB|Q0CMU3 [details] [associations]
symbol:pgaI "Probable endopolygalacturonase I"
species:341663 "Aspergillus terreus NIH2624" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] [GO:0047911 "galacturan
1,4-alpha-galacturonidase activity" evidence=ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
GO:GO:0045490 eggNOG:COG5434 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0047911 HOGENOM:HOG000193107
OrthoDB:EOG46DQBJ EMBL:CH476600 RefSeq:XP_001214169.1
EnsemblFungi:CADATEAT00005096 GeneID:4321227 Uniprot:Q0CMU3
Length = 368
Score = 128 (50.1 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 52/197 (26%), Positives = 86/197 (43%)
Query: 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI-TAHADSP---NTEGIHIGSSNGSEI 108
L DSTI G+ ++ I++ NL L D+ I + DS NT+G I SNG I
Sbjct: 140 LEDSTIKGLNIKNTPVQAISVQA-NNLHLTDITIDNSDGDSKGGHNTDGFDISESNGVYI 198
Query: 109 SHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
S + + DDC+++ GHG+S+GS+G G +D V G+ + + T T +
Sbjct: 199 SGANVKNQDDCIAINSGKNIEFTGGTCSGGHGLSIGSIG-GRDDNTVQGVKITDSTVTNS 257
Query: 154 NIVTNNVENPIVIDQL--YCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIPCQNIGIGN 211
+ N + ++D+ NIK+ K V + + P I I +
Sbjct: 258 D---NGIRIKTIVDETGSVSDVTYSNIKLSGIHKKGIVIQQDYKNGGPTGKPSNGIPIKD 314
Query: 212 INWVYNGVNVKVEGPET 228
+ +G+ V+ T
Sbjct: 315 VT--VDGITGSVDSKAT 329
>TAIR|locus:2076591 [details] [associations]
symbol:AT3G57790 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005576 "extracellular region" evidence=ISM] [GO:0005975
"carbohydrate metabolic process" evidence=IEA;ISS] [GO:0005774
"vacuolar membrane" evidence=IDA] InterPro:IPR000743 Pfam:PF00295
GO:GO:0005774 EMBL:CP002686 GO:GO:0005576 GO:GO:0005975
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
IPI:IPI00532018 RefSeq:NP_567055.1 UniGene:At.28595
ProteinModelPortal:F4J3I0 SMR:F4J3I0 PRIDE:F4J3I0
EnsemblPlants:AT3G57790.1 GeneID:824949 KEGG:ath:AT3G57790
OMA:ITRCHID ArrayExpress:F4J3I0 Uniprot:F4J3I0
Length = 490
Score = 98 (39.6 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 68 YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
Y+ ++I+ C N ++D+ I ++PN +GI I SN + I+ I TGDD +
Sbjct: 196 YWCLHIVRCENTSVHDVSILGDFNTPNNDGIDIEDSNNTVITRCHIDTGDDAI 248
Score = 74 (31.1 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACN--WDGIKSA--VLVPPGKYLSIRFN 51
+V DFGA DGI D+ A ++ +ACN + S V+ P G YL+ + +
Sbjct: 36 SVTDFGATGDGINYDTSAIQSTI-DACNRHYTSFSSICRVVFPSGNYLTAKLH 87
>SGD|S000003914 [details] [associations]
symbol:PGU1 "Endo-polygalacturonase" species:4932
"Saccharomyces cerevisiae" [GO:0004650 "polygalacturonase activity"
evidence=IEA;IDA] [GO:0007124 "pseudohyphal growth" evidence=NAS]
[GO:0045490 "pectin catabolic process" evidence=IDA] [GO:0005576
"extracellular region" evidence=IDA] [GO:0016798 "hydrolase
activity, acting on glycosyl bonds" evidence=IEA] [GO:0005975
"carbohydrate metabolic process" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
SGD:S000003914 GO:GO:0005576 EMBL:BK006943 GO:GO:0045490 CAZy:GH28
eggNOG:COG5434 KO:K01184 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 GO:GO:0007124 RefSeq:NP_012687.3
GeneID:853618 KEGG:sce:YJR153W KO:K08139 RefSeq:NP_012692.3
GeneID:853623 KEGG:sce:YJR158W HOGENOM:HOG000193107
OrthoDB:EOG46DQBJ EMBL:AB011818 EMBL:Z49653 EMBL:AY558092
PIR:S57182 ProteinModelPortal:P47180 SMR:P47180 STRING:P47180
mycoCLAP:PGA28A_YEAST PeptideAtlas:P47180 EnsemblFungi:YJR153W
CYGD:YJR153w OMA:IFEHING NextBio:974475 Genevestigator:P47180
GermOnline:YJR153W Uniprot:P47180
Length = 361
Score = 124 (48.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 42/136 (30%), Positives = 63/136 (46%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH- 89
WDG+ + V P K++ + + T IK+ + F IN C +L ++D+ I
Sbjct: 113 WDGLGDSGKVKP-KFVKLALTGTSKVTGLNIKNAPHQVFSIN--KCSDLTISDITIDIRD 169
Query: 90 ADSP---NTEGIHIGSSNGSEISHSVIATGDDCVSL---------------GHGISVGSL 131
DS NT+G +GSS+ I + DDC+++ GHGISVGS+
Sbjct: 170 GDSAGGHNTDGFDVGSSSNVLIQGCTVYNQDDCIAVNSGSTIKFMNNYCYNGHGISVGSV 229
Query: 132 GKGINDEEVVGLTVRN 147
G G +D V G N
Sbjct: 230 G-GRSDNTVNGFWAEN 244
>UNIPROTKB|B0YDE8 [details] [associations]
symbol:pgaX "Probable exopolygalacturonase X"
species:451804 "Aspergillus fumigatus A1163" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0047911
EMBL:DS499602 EnsemblFungi:CADAFUBT00009433 HOGENOM:HOG000217379
Uniprot:B0YDE8
Length = 432
Score = 91 (37.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 142 GL-TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNK--CNIKVPSQVKTSNVRFNNIRGTS 198
GL +V+N T+ I NV+ I + Q Y N CN + PS + S++ F N RGT+
Sbjct: 323 GLGSVKNVTYNQMYI--ENVDWAIEVTQCYGQKNLTLCN-EYPSNLTISDIHFKNFRGTT 379
Query: 199 ANKIPCQNIGI-----GNI-NWVYNGVNVKVEGPETTS--LCSNVKPTL 239
+ K N+G N+ + +Y N+ V+ P+ T +C+NV +L
Sbjct: 380 SGKRD-PNVGTIVCSSPNVCSDIY-AENIDVKSPKGTDNFVCTNVDKSL 426
Score = 74 (31.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
++ NT+G S+ I +SVI GDDCVS HGISVGSLG+
Sbjct: 219 EAKNTDGWDTYRSDNIVIQNSVINNGDDCVSFKPNSTNILVQNLHCNGSHGISVGSLGQY 278
Query: 135 INDEEVV 141
+ ++V
Sbjct: 279 KGEVDIV 285
>UNIPROTKB|Q4WCZ8 [details] [associations]
symbol:pgaX "Probable exopolygalacturonase X"
species:330879 "Aspergillus fumigatus Af293" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GenomeReviews:CM000174_GR
GO:GO:0045490 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
KO:K01238 EMBL:AAHF01000012 GO:GO:0047911 HOGENOM:HOG000217379
eggNOG:NOG297100 RefSeq:XP_747778.1 EnsemblFungi:CADAFUAT00000417
GeneID:3505169 KEGG:afm:AFUA_6G02980 OrthoDB:EOG4D5661
Uniprot:Q4WCZ8
Length = 432
Score = 91 (37.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 142 GL-TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNK--CNIKVPSQVKTSNVRFNNIRGTS 198
GL +V+N T+ I NV+ I + Q Y N CN + PS + S++ F N RGT+
Sbjct: 323 GLGSVKNVTYNQMYI--ENVDWAIEVTQCYGQKNLTLCN-EYPSNLTISDIHFKNFRGTT 379
Query: 199 ANKIPCQNIGI-----GNI-NWVYNGVNVKVEGPETTS--LCSNVKPTL 239
+ K N+G N+ + +Y N+ V+ P+ T +C+NV +L
Sbjct: 380 SGKRD-PNVGTIVCSSPNVCSDIY-AENIDVKSPKGTDNFVCTNVDKSL 426
Score = 74 (31.1 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
++ NT+G S+ I +SVI GDDCVS HGISVGSLG+
Sbjct: 219 EAKNTDGWDTYRSDNIVIQNSVINNGDDCVSFKPNSTNILVQNLHCNGSHGISVGSLGQY 278
Query: 135 INDEEVV 141
+ ++V
Sbjct: 279 KGEVDIV 285
>UNIPROTKB|A1DAX2 [details] [associations]
symbol:pgxB "Probable exopolygalacturonase B"
species:331117 "Neosartorya fischeri NRRL 181" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
KO:K01213 GO:GO:0047911 EMBL:DS027694 HOGENOM:HOG000217379
OrthoDB:EOG4D5661 RefSeq:XP_001261909.1
EnsemblFungi:CADNFIAT00009347 GeneID:4588479 KEGG:nfi:NFIA_096340
Uniprot:A1DAX2
Length = 453
Score = 103 (41.3 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 145 VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKV-PSQVKTSNVRFNNIRGTSANK 201
+ N T+ NI N +NPIV+DQ Y N PS+V +N+ F NI GTS+ K
Sbjct: 327 INNVTYK--NIHVENTDNPIVLDQCYFNINATQCAAYPSRVNFTNIVFENIYGTSSGK 382
Score = 58 (25.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 23/92 (25%), Positives = 47/92 (51%)
Query: 38 VLVPPGKYLS-IRFNFLNDSTIT--GIKSVDSRYFHINILGCYNLKLNDLKITAHADS-- 92
+L P KY I F N + ++ GI ++S + + ++ N++ I A++ +
Sbjct: 168 ILDPNNKYYRPILFVTENATRVSVEGITQLNSPCWTNFFVRTKDISFNNVFIHAYSTNAS 227
Query: 93 --P-NTEGIHIGSSNGSEISHSVIATGDDCVS 121
P NT+G + +G ++++ + GDDC+S
Sbjct: 228 ALPKNTDGFDTLNVDGLTVTNTRVDIGDDCLS 259
Score = 53 (23.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 25/96 (26%), Positives = 44/96 (45%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--------------- 122
N+ ++ A A NT+G + +G ++++ + GDDC+S
Sbjct: 216 NVFIHAYSTNASALPKNTDGFDTLNVDGLTVTNTRVDIGDDCLSPKPNTTNVFVQNLWCN 275
Query: 123 G-HGISVGSLGK--GINDEEVVGLTVRNCTF-TGTN 154
G HG S+GS+G+ G+ D + + + N T G N
Sbjct: 276 GTHGTSMGSIGQYPGVLDI-IENVWIENVTLLNGEN 310
>UNIPROTKB|A1DLC1 [details] [associations]
symbol:pgaX "Probable exopolygalacturonase X"
species:331117 "Neosartorya fischeri NRRL 181" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:DS027698 GO:GO:0047911 HOGENOM:HOG000217379 OrthoDB:EOG4D5661
RefSeq:XP_001257489.1 EnsemblFungi:CADNFIAT00004219 GeneID:4584003
KEGG:nfi:NFIA_049320 Uniprot:A1DLC1
Length = 432
Score = 87 (35.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 33/108 (30%), Positives = 54/108 (50%)
Query: 142 GL-TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNK--CNIKVPSQVKTSNVRFNNIRGTS 198
GL +V+N T+ I NV+ I + Q Y N CN + PS + S++ F N RGT+
Sbjct: 323 GLGSVKNITYNQMYI--ENVDWAIEVTQCYGQKNLTLCN-EHPSNLTISDIHFKNFRGTT 379
Query: 199 ANKIPCQNIGI-----GNINWVYNGVNVKVEGPETTS--LCSNVKPTL 239
+ K ++G N+ + N+ V+ P+ T +C+NV +L
Sbjct: 380 SGKRD-PDVGTIVCSSPNVCSDIHAENINVKSPKGTDEFVCTNVDKSL 426
Score = 74 (31.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
++ NT+G S+ I +SVI GDDCVS HGISVGSLG+
Sbjct: 219 EAKNTDGWDTYRSDNIVIQNSVINNGDDCVSFKPNSTNIIVQNLHCNGSHGISVGSLGQY 278
Query: 135 INDEEVV 141
+ ++V
Sbjct: 279 KGEVDIV 285
>UNIPROTKB|Q9KTH3 [details] [associations]
symbol:VC0929 "Putative uncharacterized protein VC0929"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] GenomeReviews:AE003852_GR Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 EMBL:AE004176 PIR:G82261
RefSeq:NP_230576.1 ProteinModelPortal:Q9KTH3 DNASU:2614149
GeneID:2614149 KEGG:vch:VC0929 PATRIC:20080960 OMA:FRIDIRN
ProtClustDB:CLSK793865 Uniprot:Q9KTH3
Length = 408
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 54/212 (25%), Positives = 96/212 (45%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLND-STITGI 61
NV ++GA+A+ +DDS AF+ A + N D A+++P G+Y + +L + + I I
Sbjct: 37 NVIEYGAIANDGEDDSNAFQHALNQLNNGD----ALIIPTGEYQICKTLYLKEKNNIEII 92
Query: 62 KSVDS-----RYFH----INILGCYNLKLNDLKITA--HAD-SP--NTEGIHIGSSNGSE 107
S++S R F+ ++I NLK+ L + D P +G+++GS+ G+
Sbjct: 93 GSINSKLKKCRSFNGEYLLHITYTQNLKIQGLSFEGLNNGDLKPLWGEQGVYLGSTKGTL 152
Query: 108 ISHSVIAT-GDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVE----N 162
+ + A GD + + S+ G +V +C T T E
Sbjct: 153 VVQNQFARFGDAALRMTTASQDHSIPPGSMAIKVSHNHFEDCAQVTTTQATAGTEMHGTQ 212
Query: 163 PIVIDQLYCPYNKCNIKVPSQVKTSNVR-FNN 193
I+ID +N C +K+ ++ T + NN
Sbjct: 213 DIIIDNNQ--FNACKLKLSARADTRGAKVINN 242
>TIGR_CMR|VC_0929 [details] [associations]
symbol:VC_0929 "hypothetical protein" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND]
GenomeReviews:AE003852_GR Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AE004176 PIR:G82261 RefSeq:NP_230576.1
ProteinModelPortal:Q9KTH3 DNASU:2614149 GeneID:2614149
KEGG:vch:VC0929 PATRIC:20080960 OMA:FRIDIRN ProtClustDB:CLSK793865
Uniprot:Q9KTH3
Length = 408
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 54/212 (25%), Positives = 96/212 (45%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLND-STITGI 61
NV ++GA+A+ +DDS AF+ A + N D A+++P G+Y + +L + + I I
Sbjct: 37 NVIEYGAIANDGEDDSNAFQHALNQLNNGD----ALIIPTGEYQICKTLYLKEKNNIEII 92
Query: 62 KSVDS-----RYFH----INILGCYNLKLNDLKITA--HAD-SP--NTEGIHIGSSNGSE 107
S++S R F+ ++I NLK+ L + D P +G+++GS+ G+
Sbjct: 93 GSINSKLKKCRSFNGEYLLHITYTQNLKIQGLSFEGLNNGDLKPLWGEQGVYLGSTKGTL 152
Query: 108 ISHSVIAT-GDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVE----N 162
+ + A GD + + S+ G +V +C T T E
Sbjct: 153 VVQNQFARFGDAALRMTTASQDHSIPPGSMAIKVSHNHFEDCAQVTTTQATAGTEMHGTQ 212
Query: 163 PIVIDQLYCPYNKCNIKVPSQVKTSNVR-FNN 193
I+ID +N C +K+ ++ T + NN
Sbjct: 213 DIIIDNNQ--FNACKLKLSARADTRGAKVINN 242
>UNIPROTKB|B8NG16 [details] [associations]
symbol:pgaX "Probable exopolygalacturonase X"
species:332952 "Aspergillus flavus NRRL3357" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0047911
HOGENOM:HOG000217379 EMBL:EQ963478 RefSeq:XP_002379191.1
EnsemblFungi:CADAFLAT00007056 GeneID:7918703 KEGG:afv:AFLA_131770
eggNOG:NOG297100 Uniprot:B8NG16
Length = 433
Score = 83 (34.3 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 34/104 (32%), Positives = 56/104 (53%)
Query: 142 GL-TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNK--CNIKVPSQVKTSNVRFNNIRGTS 198
GL +V+N T+ I NV+ I + Q Y N+ CN + PS + S+V FN++ G +
Sbjct: 321 GLGSVQNITYDKMYI--ENVDWAIEVTQCYGQKNQTLCN-ENPSNLTISDVYFNDLTGVT 377
Query: 199 ANKIPCQNIG--IGNINWVYNGV---NVKVEGPETTS--LCSNV 235
+ K N+G I + V +G+ N+ V+ P+ S +C+NV
Sbjct: 378 SGKND-PNVGTIICSSPDVCSGIHATNIDVKSPDGDSGFVCTNV 420
Score = 74 (31.1 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 24/67 (35%), Positives = 33/67 (49%)
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
++ NT+G S+ I +SVI GDDCVS HGISVGSLG+
Sbjct: 217 EAKNTDGWDTYRSSNIVIQNSVINNGDDCVSFKPNSTEILVQNLHCNGSHGISVGSLGQY 276
Query: 135 INDEEVV 141
+ ++V
Sbjct: 277 QGEVDIV 283
>UNIPROTKB|B8NK45 [details] [associations]
symbol:rhgA "Probable rhamnogalacturonase A" species:332952
"Aspergillus flavus NRRL3357" [GO:0045490 "pectin catabolic
process" evidence=ISS] [GO:0046576 "rhamnogalacturonan
alpha-L-rhamnopyranosyl-(1->4)-alpha-D-galactopyranosyluronide
lyase activity" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:EQ963479 RefSeq:XP_002380653.1 EnsemblFungi:CADAFLAT00008518
GeneID:7914456 KEGG:afv:AFLA_070940 HOGENOM:HOG000217527
GO:GO:0046576 Uniprot:B8NK45
Length = 467
Score = 85 (35.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+RF + D ++ + VDS FH+++ C N ++ ++ I DS +G+ I S N
Sbjct: 150 LRFYDVTDFSVHDVALVDSPAFHLSLDTCKNAEIYNMAIRG-GDSGGLDGVDIWSEN--V 206
Query: 108 ISHSVIATG-DDCVSL 122
H V T D+CV++
Sbjct: 207 WVHDVEVTNKDECVTV 222
Score = 72 (30.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
NV+D+GA AD D A E AW + C G+ V +P G Y
Sbjct: 41 NVQDYGAKADKETDIGSAIEKAWDD-CAEGGV---VYIPSGDY 79
>UNIPROTKB|Q2U293 [details] [associations]
symbol:rhgA "Probable rhamnogalacturonase A" species:510516
"Aspergillus oryzae RIB40" [GO:0045490 "pectin catabolic process"
evidence=ISS] [GO:0046576 "rhamnogalacturonan
alpha-L-rhamnopyranosyl-(1->4)-alpha-D-galactopyranosyluronide
lyase activity" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000217527 GO:GO:0046576 OrthoDB:EOG4PCF1G EMBL:AP007169
RefSeq:XP_001825455.1 ProteinModelPortal:Q2U293 SMR:Q2U293
EnsemblFungi:CADAORAT00009306 GeneID:5997550
GenomeReviews:AP007169_GR KEGG:aor:AOR_1_936074 Uniprot:Q2U293
Length = 467
Score = 85 (35.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+RF + D ++ + VDS FH+++ C N ++ ++ I DS +G+ I S N
Sbjct: 150 LRFYDVTDFSVHDVALVDSPAFHLSLDTCKNAEIYNMAIRG-GDSGGLDGVDIWSEN--V 206
Query: 108 ISHSVIATG-DDCVSL 122
H V T D+CV++
Sbjct: 207 WVHDVEVTNKDECVTV 222
Score = 72 (30.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
NV+D+GA AD D A E AW + C G+ V +P G Y
Sbjct: 41 NVQDYGAKADKETDIGSAIEKAWDD-CAEGGV---VYIPSGDY 79
>TAIR|locus:2202170 [details] [associations]
symbol:AT1G19170 species:3702 "Arabidopsis thaliana"
[GO:0004650 "polygalacturonase activity" evidence=IEA;ISS]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA;ISS]
InterPro:IPR000743 Pfam:PF00295 EMBL:CP002684 GO:GO:0005576
GO:GO:0005975 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
GO:GO:0016829 IPI:IPI00527248 RefSeq:NP_173351.1 UniGene:At.41758
ProteinModelPortal:F4IE17 SMR:F4IE17 PRIDE:F4IE17
EnsemblPlants:AT1G19170.1 GeneID:838500 KEGG:ath:AT1G19170
OMA:GHYLRPS Uniprot:F4IE17
Length = 506
Score = 114 (45.2 bits), Expect = 0.00061, P = 0.00061
Identities = 39/169 (23%), Positives = 76/169 (44%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD-SPNTEGIHIGSSNGS 106
++ + +D I I DS ++ ++ C N+ + ++ I A +PNT+GI S
Sbjct: 227 VQIMWSSDIVIANITMRDSPFWTLHPYDCKNVTIRNVTILAPVTGAPNTDGIDPDSCEDM 286
Query: 107 EISHSVIATGDDCVSLGHGISVGSLGKGINDEEVV--GLTVRNCTFTGTNI---VTNNVE 161
I I+TGDD +++ G + G ++ L VR+ G +I ++ +
Sbjct: 287 VIEDCYISTGDDAIAIKSGWDQFGIAYGRPSTNILIRNLVVRSVISAGVSIGSEMSGGIS 346
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIPCQNIGIG 210
N + I+ L ++ I++ KT+ R IR + + N+ +G
Sbjct: 347 N-VTIENLLIWNSRRGIRI----KTAPGRGGYIRNITYKNLTLDNVRVG 390
Score = 96 (38.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 29/79 (36%), Positives = 42/79 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSA--VLVPPGKYLSIRFN------- 51
VF++KDFG V DG +++AFE A G + VPPG++L+ FN
Sbjct: 86 VFDLKDFGGVGDGFTLNTEAFERAVISISKLGGSSGGGQLNVPPGRWLTAPFNLTSHMTL 145
Query: 52 FL-NDSTITGIKSVDSRYF 69
FL DS I G++ D +Y+
Sbjct: 146 FLAEDSEILGVE--DEKYW 162
Score = 60 (26.2 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 39/157 (24%), Positives = 63/157 (40%)
Query: 98 IHIGSSNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLT--VRNCTFTGTNI 155
I G S GSE+S + V++ + + + +GI + G +RN T+ N+
Sbjct: 331 ISAGVSIGSEMSGGI-----SNVTI-ENLLIWNSRRGIRIKTAPGRGGYIRNITYK--NL 382
Query: 156 VTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIPCQNIGIGNI--- 212
+NV IVI Y + N + S F I G ++P + G I
Sbjct: 383 TLDNVRVGIVIKTDYNEHADDNYDRKAYPILSGFSFAGIHGQGV-RVPVRIHGSEQIPVR 441
Query: 213 NWVYNGVNVKVEGPETTSL-CSNVKPTLFGKQIPATC 248
N + ++V + + CS VK +FG P C
Sbjct: 442 NVTFRDMSVGLTYKKKHIFQCSFVKGRVFGSIFPRPC 478
>UNIPROTKB|B0Y4Z4 [details] [associations]
symbol:pgaA "Probable endopolygalacturonase A"
species:451804 "Aspergillus fumigatus A1163" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:DS499598
HOGENOM:HOG000193107 ProteinModelPortal:B0Y4Z4 SMR:B0Y4Z4
EnsemblFungi:CADAFUBT00007031 Uniprot:B0Y4Z4
Length = 368
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 49/161 (30%), Positives = 75/161 (46%)
Query: 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI-TAHADSP---NTEGIHIGSSNGSEI 108
L DSTITG+ ++ I++ NL L D+ I + D NT+G I S G I
Sbjct: 140 LEDSTITGLSIKNTPVQAISVQAT-NLYLIDITIDNSDGDDNGGHNTDGFDISESTGVYI 198
Query: 109 SHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
+ + DDC+++ GHG+S+GS+G G +D TV+N T T +
Sbjct: 199 RGATVKNQDDCIAINSGENIEFSGGTCSGGHGLSIGSVG-GRDDN-----TVKNVTITDS 252
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNI 194
VT++ N + I +Y SQV SN++ + I
Sbjct: 253 T-VTDSA-NGVRIKTVYDATGSV-----SQVTYSNIKLSGI 286
>UNIPROTKB|Q4WQT2 [details] [associations]
symbol:pgaA "Probable endopolygalacturonase A"
species:330879 "Aspergillus fumigatus Af293" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:AAHF01000005 GenomeReviews:CM000172_GR KO:K01213
HOGENOM:HOG000193107 OrthoDB:EOG46DQBJ RefSeq:XP_751440.1
ProteinModelPortal:Q4WQT2 SMR:Q4WQT2 STRING:Q4WQT2
EnsemblFungi:CADAFUAT00007803 GeneID:3509371 KEGG:afm:AFUA_4G13920
OMA:IRIKTIS Uniprot:Q4WQT2
Length = 368
Score = 113 (44.8 bits), Expect = 0.00048, P = 0.00048
Identities = 49/161 (30%), Positives = 75/161 (46%)
Query: 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI-TAHADSP---NTEGIHIGSSNGSEI 108
L DSTITG+ ++ I++ NL L D+ I + D NT+G I S G I
Sbjct: 140 LEDSTITGLSIKNTPVQAISVQAT-NLYLIDITIDNSDGDDNGGHNTDGFDISESTGVYI 198
Query: 109 SHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
+ + DDC+++ GHG+S+GS+G G +D TV+N T T +
Sbjct: 199 RGATVKNQDDCIAINSGENIEFSGGTCSGGHGLSIGSVG-GRDDN-----TVKNVTITDS 252
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNI 194
VT++ N + I +Y SQV SN++ + I
Sbjct: 253 T-VTDSA-NGVRIKTVYDATGSV-----SQVTYSNIKLSGI 286
>ASPGD|ASPL0000031573 [details] [associations]
symbol:pgaC species:162425 "Emericella nidulans"
[GO:0004650 "polygalacturonase activity" evidence=IDA] [GO:0045490
"pectin catabolic process" evidence=IDA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 EMBL:BN001305
eggNOG:COG5434 KO:K01184 GO:GO:0004650 Gene3D:2.160.20.10
InterPro:IPR006626 InterPro:IPR012334 InterPro:IPR011050
SMART:SM00710 SUPFAM:SSF51126 HOGENOM:HOG000193107 OMA:IEQNYDG
OrthoDB:EOG40VZZC EMBL:DQ490517 EMBL:AACD01000150
RefSeq:XP_681596.1 ProteinModelPortal:Q5ATQ3 SMR:Q5ATQ3
EnsemblFungi:CADANIAT00002791 GeneID:2868744 KEGG:ani:AN8327.2
Uniprot:Q5ATQ3
Length = 380
Score = 112 (44.5 bits), Expect = 0.00066, P = 0.00066
Identities = 42/142 (29%), Positives = 69/142 (48%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI--TA 88
WDG S V K+ + L DSTI + ++ ++I GC L + D+ I +A
Sbjct: 127 WDGEGSNGGVTKPKFFYA--HDLTDSTIQNLYIENTPVQAVSINGCDGLTITDMTIDNSA 184
Query: 89 HADSP--NTEGIHIGSSNGSEISHSVIATGDDCVSL---------------GHGISVGSL 131
D+ NT+G IG S+ I+ + + DDCV++ GHG+S+GS+
Sbjct: 185 GDDAGGHNTDGFDIGESSNVVITGAKVYNQDDCVAVNSGTSITFSGGTCSGGHGLSIGSV 244
Query: 132 GKGINDEEVVGLTVRNCTFTGT 153
G G +D V +T ++ T + +
Sbjct: 245 G-GRDDNTVDTVTFKDSTVSNS 265
>UNIPROTKB|Q5ATQ3 [details] [associations]
symbol:AN8327 "Endopolygalacturonase AN8327" species:227321
"Aspergillus nidulans FGSC A4" [GO:0004650 "polygalacturonase
activity" evidence=ISS;IDA] [GO:0005576 "extracellular region"
evidence=ISS] [GO:0045490 "pectin catabolic process"
evidence=ISS;IDA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
GO:GO:0005576 GO:GO:0045490 EMBL:BN001305 eggNOG:COG5434 KO:K01184
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000193107 OMA:IEQNYDG OrthoDB:EOG40VZZC EMBL:DQ490517
EMBL:AACD01000150 RefSeq:XP_681596.1 ProteinModelPortal:Q5ATQ3
SMR:Q5ATQ3 EnsemblFungi:CADANIAT00002791 GeneID:2868744
KEGG:ani:AN8327.2 Uniprot:Q5ATQ3
Length = 380
Score = 112 (44.5 bits), Expect = 0.00066, P = 0.00066
Identities = 42/142 (29%), Positives = 69/142 (48%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI--TA 88
WDG S V K+ + L DSTI + ++ ++I GC L + D+ I +A
Sbjct: 127 WDGEGSNGGVTKPKFFYA--HDLTDSTIQNLYIENTPVQAVSINGCDGLTITDMTIDNSA 184
Query: 89 HADSP--NTEGIHIGSSNGSEISHSVIATGDDCVSL---------------GHGISVGSL 131
D+ NT+G IG S+ I+ + + DDCV++ GHG+S+GS+
Sbjct: 185 GDDAGGHNTDGFDIGESSNVVITGAKVYNQDDCVAVNSGTSITFSGGTCSGGHGLSIGSV 244
Query: 132 GKGINDEEVVGLTVRNCTFTGT 153
G G +D V +T ++ T + +
Sbjct: 245 G-GRDDNTVDTVTFKDSTVSNS 265
>UNIPROTKB|B0YAA4 [details] [associations]
symbol:pgxB "Probable exopolygalacturonase B"
species:451804 "Aspergillus fumigatus A1163" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 GO:GO:0047911
EMBL:DS499600 HOGENOM:HOG000217379 EnsemblFungi:CADAFUBT00008325
Uniprot:B0YAA4
Length = 453
Score = 98 (39.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 145 VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKV-PSQVKTSNVRFNNIRGTSANK 201
+ N T+ NI N +NPIV+DQ Y N PS+V +N+ F +I GTS+ K
Sbjct: 327 INNVTYK--NIHVENTDNPIVLDQCYFNINATQCAAYPSRVNFTNIVFEDIYGTSSGK 382
Score = 55 (24.4 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
N+ ++ A A NT+G + +G ++++ + GDDC+S
Sbjct: 216 NVFIHAYSTNASALPKNTDGFDTLNVDGLTVTNTRVDIGDDCLS 259
>UNIPROTKB|Q4WBK6 [details] [associations]
symbol:pgxB "Probable exopolygalacturonase B"
species:330879 "Aspergillus fumigatus Af293" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
KO:K01213 GO:GO:0047911 EMBL:AAHF01000014 GenomeReviews:CM000176_GR
HOGENOM:HOG000217379 OrthoDB:EOG4D5661 RefSeq:XP_746944.1
STRING:Q4WBK6 EnsemblFungi:CADAFUAT00000975 GeneID:3504371
KEGG:afm:AFUA_8G02630 Uniprot:Q4WBK6
Length = 453
Score = 98 (39.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 145 VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKV-PSQVKTSNVRFNNIRGTSANK 201
+ N T+ NI N +NPIV+DQ Y N PS+V +N+ F +I GTS+ K
Sbjct: 327 INNVTYK--NIHVENTDNPIVLDQCYFNINATQCAAYPSRVNFTNIVFEDIYGTSSGK 382
Score = 55 (24.4 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
N+ ++ A A NT+G + +G ++++ + GDDC+S
Sbjct: 216 NVFIHAYSTNASALPKNTDGFDTLNVDGLTVTNTRVDIGDDCLS 259
>UNIPROTKB|A1CVV8 [details] [associations]
symbol:pgaA "Probable endopolygalacturonase A"
species:331117 "Neosartorya fischeri NRRL 181" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 eggNOG:COG5434
KO:K01184 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:DS027685 HOGENOM:HOG000193107 OrthoDB:EOG46DQBJ
RefSeq:XP_001266657.1 ProteinModelPortal:A1CVV8 SMR:A1CVV8
EnsemblFungi:CADNFIAT00009575 GeneID:4594124 KEGG:nfi:NFIA_102450
Uniprot:A1CVV8
Length = 368
Score = 111 (44.1 bits), Expect = 0.00081, P = 0.00081
Identities = 46/156 (29%), Positives = 72/156 (46%)
Query: 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI-TAHADSP---NTEGIHIGSSNGSEI 108
L DSTITG+ ++ I++ NL L D+ I + D NT+G I S G I
Sbjct: 140 LEDSTITGLSIKNTPVQAISVQAT-NLYLIDITIDNSDGDDNGGHNTDGFDISESTGVYI 198
Query: 109 SHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
+ + DDC+++ GHG+S+GS+G G +D TV+N T T +
Sbjct: 199 RGATVKNQDDCIAINSGENIEFSGGTCSGGHGLSIGSVG-GRDDN-----TVKNVTITDS 252
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
VT++ N + I +Y + S +K S +
Sbjct: 253 T-VTDSA-NGVRIKTVYDATGSVSEVTYSNIKLSGI 286
>UNIPROTKB|A2QAH3 [details] [associations]
symbol:pgaI "Probable endopolygalacturonase I"
species:425011 "Aspergillus niger CBS 513.88" [GO:0004650
"polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] [GO:0047911 "galacturan
1,4-alpha-galacturonidase activity" evidence=ISS]
InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502 GO:GO:0005576
GenomeReviews:AM270980_GR GO:GO:0045490 CAZy:GH28 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 KO:K01213
GO:GO:0047911 HOGENOM:HOG000193107 OrthoDB:EOG46DQBJ EMBL:AM269981
RefSeq:XP_001389562.1 ProteinModelPortal:A2QAH3 SMR:A2QAH3
Allergome:8269 EnsemblFungi:CADANGAT00001150 GeneID:4978020
KEGG:ang:ANI_1_1554014 Uniprot:A2QAH3
Length = 368
Score = 111 (44.1 bits), Expect = 0.00081, P = 0.00081
Identities = 59/206 (28%), Positives = 96/206 (46%)
Query: 8 GAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSR 67
GAV DG D S+ W ++ +G K+ P K++ I + + DST GI ++
Sbjct: 109 GAVIDG--DGSR-----WWDSKGTNGGKTK----P-KFMYI--HDVEDSTFKGINIKNTP 154
Query: 68 YFHINILGCYNLKLNDLKI-TAHADSP---NTEGIHIGSSNGSEISHSVIATGDDCVSL- 122
I++ N+ LND I + D NT+G I S G IS + + DDC+++
Sbjct: 155 VQAISVQAT-NVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKNQDDCIAIN 213
Query: 123 --------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQ 168
GHG+S+GS+G G +D TV+N T + + + +N N + I
Sbjct: 214 SGESISFTGGTCSGGHGLSIGSVG-GRDDN-----TVKNVTISDSTV--SNSANGVRIKT 265
Query: 169 LYCPYNKCNIKVPSQVKTSNVRFNNI 194
+Y K V S++ SN++ + I
Sbjct: 266 IY----KETGDV-SEITYSNIQLSGI 286
>UNIPROTKB|B0XPA1 [details] [associations]
symbol:AFUB_016610 "Probable endopolygalacturonase
AFUB_016610" species:451804 "Aspergillus fumigatus A1163"
[GO:0004650 "polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:DS499594
HOGENOM:HOG000193107 EnsemblFungi:CADAFUBT00001666 Uniprot:B0XPA1
Length = 378
Score = 111 (44.1 bits), Expect = 0.00085, P = 0.00085
Identities = 44/148 (29%), Positives = 71/148 (47%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WDG K+ + + + S+IT + +++ ++I GC L + D+ I A
Sbjct: 126 WDGQGGNGGKTKPKFFAAH-DLTSSSSITDLHILNTPVQAVSINGCDGLTITDITIDNSA 184
Query: 91 -DSP---NTEGIHIGSSNGSEISHSVIATGDDCVSL---------------GHGISVGSL 131
D+ NT+ IGSS+ IS + + DDCV++ GHG+S+GS+
Sbjct: 185 GDTQGGHNTDAFDIGSSSNIIISGAKVYNQDDCVAVNSGTDITFTGGLCSGGHGLSIGSV 244
Query: 132 GKGINDEEVVGLTVRNCTFTGTNIVTNN 159
G G +D TV N +FT + VTN+
Sbjct: 245 G-GRSDN-----TVENVSFTNSQ-VTNS 265
>UNIPROTKB|Q4WR80 [details] [associations]
symbol:AFUA_1G17220 "Probable endopolygalacturonase
AFUA_1G17220" species:330879 "Aspergillus fumigatus Af293"
[GO:0004650 "polygalacturonase activity" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISS] [GO:0045490 "pectin catabolic
process" evidence=ISS] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 eggNOG:COG5434
KO:K01184 GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
HOGENOM:HOG000193107 EMBL:AAHF01000004 RefSeq:XP_753090.1
STRING:Q4WR80 EnsemblFungi:CADAFUAT00007415 GeneID:3510122
KEGG:afm:AFUA_1G17220 OMA:IEQNYDG OrthoDB:EOG40VZZC Uniprot:Q4WR80
Length = 378
Score = 111 (44.1 bits), Expect = 0.00085, P = 0.00085
Identities = 44/148 (29%), Positives = 71/148 (47%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WDG K+ + + + S+IT + +++ ++I GC L + D+ I A
Sbjct: 126 WDGQGGNGGKTKPKFFAAH-DLTSSSSITDLHILNTPVQAVSINGCDGLTITDITIDNSA 184
Query: 91 -DSP---NTEGIHIGSSNGSEISHSVIATGDDCVSL---------------GHGISVGSL 131
D+ NT+ IGSS+ IS + + DDCV++ GHG+S+GS+
Sbjct: 185 GDTQGGHNTDAFDIGSSSNIIISGAKVYNQDDCVAVNSGTDITFTGGLCSGGHGLSIGSV 244
Query: 132 GKGINDEEVVGLTVRNCTFTGTNIVTNN 159
G G +D TV N +FT + VTN+
Sbjct: 245 G-GRSDN-----TVENVSFTNSQ-VTNS 265
>ASPGD|ASPL0000073575 [details] [associations]
symbol:pgxA species:162425 "Emericella nidulans"
[GO:0004650 "polygalacturonase activity" evidence=IDA] [GO:0045490
"pectin catabolic process" evidence=IDA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000743 Pfam:PF00295
PROSITE:PS00502 GO:GO:0005576 GO:GO:0045490 eggNOG:COG5434
GO:GO:0004650 Gene3D:2.160.20.10 InterPro:IPR006626
InterPro:IPR012334 InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126
EMBL:BN001303 EMBL:AACD01000161 GO:GO:0047911 HOGENOM:HOG000217379
OrthoDB:EOG4D5661 EMBL:DQ490519 RefSeq:XP_682030.1
ProteinModelPortal:Q5ASG9 EnsemblFungi:CADANIAT00006304
GeneID:2868323 KEGG:ani:AN8761.2 OMA:ARIKVWP Uniprot:Q5ASG9
Length = 434
Score = 80 (33.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
++ NT+G S I +SVI GDDCVS HGISVGSLG+
Sbjct: 219 EAKNTDGWDTYRSKNIVIQNSVINNGDDCVSFKPNSTEILVQNLYCNGSHGISVGSLGQY 278
Query: 135 INDEEVV 141
I + ++V
Sbjct: 279 IGEVDIV 285
Score = 73 (30.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 142 GL-TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNK--CNIKVPSQVKTSNVRFNNIRGTS 198
GL +V N T+ I NV+ I I Q Y N CN + PS + S+V +N+ GT+
Sbjct: 323 GLGSVSNITYEDMYI--ENVDWAIEITQCYGQKNMTLCN-EYPSNLTISDVYISNMYGTT 379
Query: 199 AN-KIPCQNIG--IGNINWVYNGV---NVKVEGPETTS--LCSNVKPTL 239
++ + P NIG + + V + + N+ V P T+ +C+NV +L
Sbjct: 380 SSARDP--NIGTIVCSSPDVCSNIYVENIDVVSPSGTNDFICTNVNESL 426
>UNIPROTKB|Q5ASG9 [details] [associations]
symbol:pgaX-1 "Exopolygalacturonase X-1" species:227321
"Aspergillus nidulans FGSC A4" [GO:0004650 "polygalacturonase
activity" evidence=ISS;IDA] [GO:0005576 "extracellular region"
evidence=ISS] [GO:0045490 "pectin catabolic process"
evidence=ISS;IDA] InterPro:IPR000743 Pfam:PF00295 PROSITE:PS00502
GO:GO:0005576 GO:GO:0045490 eggNOG:COG5434 GO:GO:0004650
Gene3D:2.160.20.10 InterPro:IPR006626 InterPro:IPR012334
InterPro:IPR011050 SMART:SM00710 SUPFAM:SSF51126 EMBL:BN001303
EMBL:AACD01000161 GO:GO:0047911 HOGENOM:HOG000217379
OrthoDB:EOG4D5661 EMBL:DQ490519 RefSeq:XP_682030.1
ProteinModelPortal:Q5ASG9 EnsemblFungi:CADANIAT00006304
GeneID:2868323 KEGG:ani:AN8761.2 OMA:ARIKVWP Uniprot:Q5ASG9
Length = 434
Score = 80 (33.2 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 25/67 (37%), Positives = 33/67 (49%)
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
++ NT+G S I +SVI GDDCVS HGISVGSLG+
Sbjct: 219 EAKNTDGWDTYRSKNIVIQNSVINNGDDCVSFKPNSTEILVQNLYCNGSHGISVGSLGQY 278
Query: 135 INDEEVV 141
I + ++V
Sbjct: 279 IGEVDIV 285
Score = 73 (30.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 35/109 (32%), Positives = 56/109 (51%)
Query: 142 GL-TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNK--CNIKVPSQVKTSNVRFNNIRGTS 198
GL +V N T+ I NV+ I I Q Y N CN + PS + S+V +N+ GT+
Sbjct: 323 GLGSVSNITYEDMYI--ENVDWAIEITQCYGQKNMTLCN-EYPSNLTISDVYISNMYGTT 379
Query: 199 AN-KIPCQNIG--IGNINWVYNGV---NVKVEGPETTS--LCSNVKPTL 239
++ + P NIG + + V + + N+ V P T+ +C+NV +L
Sbjct: 380 SSARDP--NIGTIVCSSPDVCSNIYVENIDVVSPSGTNDFICTNVNESL 426
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 249 249 0.00080 114 3 11 22 0.48 33
32 0.46 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 86
No. of states in DFA: 610 (65 KB)
Total size of DFA: 206 KB (2115 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.37u 0.09s 21.46t Elapsed: 00:00:01
Total cpu time: 21.38u 0.09s 21.47t Elapsed: 00:00:01
Start: Fri May 10 07:11:48 2013 End: Fri May 10 07:11:49 2013