BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042417
(249 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225447625|ref|XP_002274125.1| PREDICTED: polygalacturonase [Vitis vinifera]
Length = 395
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 114/253 (45%), Positives = 151/253 (59%), Gaps = 54/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A +S NT+GIHIG S+G
Sbjct: 148 INLRFNFITNSMVKDITSRDSKQFHINLLGCKNLAFYNVAISAPDESLNTDGIHIGRSSG 207
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+ S I TGDDCVS+ GHGISVGSLGK N+E VVG++V+NCT
Sbjct: 208 INITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISVKNCT 267
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T T +IV NNV NPI+IDQ YCP+N+CN+K PS++K
Sbjct: 268 LTNTQNGVRVKTFPASHQGIASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPSRIKL 327
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SNV F NIRGT++ + +PCQ++ +G+IN YNG EGP S C N+K
Sbjct: 328 SNVSFRNIRGTTSTQVAVKLLCSQGVPCQDVELGDINLKYNG----KEGP-AMSQCKNIK 382
Query: 237 PTLFGKQIPATCV 249
P L G Q+P C
Sbjct: 383 PNLLGVQLPRICA 395
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+F+V +GA ADG D S+A AW ++C+ + S V++P G Y
Sbjct: 27 IFDVTKYGARADGHSDISQALLKAWGDSCS-SPVASTVMIPNGTY 70
>gi|225446732|ref|XP_002282573.1| PREDICTED: polygalacturonase [Vitis vinifera]
Length = 395
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/252 (45%), Positives = 151/252 (59%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A +S NT+GIHIG S+G
Sbjct: 148 INLRFNFITNSMVKDITSRDSKQFHINLLGCKNLTFYNVVISAPQESLNTDGIHIGRSSG 207
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+ S I TGDDCVS+ GHGISVGSLGK N+E VVG++V+NCT
Sbjct: 208 INITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISVKNCT 267
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T T +IV NNV NPI+IDQ YCP+N+CN+K PS++K
Sbjct: 268 LTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPSRIKI 327
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SNV F NIRGT++ ++ PCQ++ +G+IN YNG EGP S C N+K
Sbjct: 328 SNVSFRNIRGTTSTQVAVKLICSQGEPCQDVELGDINLEYNG----NEGP-AMSQCKNIK 382
Query: 237 PTLFGKQIPATC 248
P L G Q+P C
Sbjct: 383 PNLLGVQLPRIC 394
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+F+V +GA DG D S+A AW +AC+ + S V++P G Y
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTY 70
>gi|147835149|emb|CAN65674.1| hypothetical protein VITISV_002009 [Vitis vinifera]
Length = 1260
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 148/255 (58%), Gaps = 58/255 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNFL +S I I S DS+ FHIN+LGC N+ + ITA DS NT+GIHIG S G
Sbjct: 1010 INLRFNFLTNSIIKDITSKDSKQFHINVLGCRNITFFQVAITAPEDSQNTDGIHIGRSRG 1069
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+HS I TGDDCVS+ GHGISVGSLG N+ V+G+ V+NCT
Sbjct: 1070 VNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGISVGSLGLYKNEAPVIGIRVKNCT 1129
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
+ T +IV NNV NPI+IDQ YCP+N+CN++VPS+VK
Sbjct: 1130 LSDTTNGVRVKTYPSSPQGTATEMHFHDIVMNNVSNPIIIDQEYCPHNQCNLQVPSRVKL 1189
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT--SLCSN 234
SN+ F NIRGT++ ++ PCQ + +GNI ++K GPE T S C N
Sbjct: 1190 SNISFKNIRGTTSTELAVNLVCSKGAPCQKVELGNI-------DLKYTGPEGTASSQCKN 1242
Query: 235 VKPTLFGKQIPATCV 249
V+ TL+G Q P TC
Sbjct: 1243 VEATLWGTQQPKTCA 1257
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 77/145 (53%), Gaps = 39/145 (26%)
Query: 75 GCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------------ 122
G NL L + I A DS NT+GIH+G S G IS ++I TGDD +S+
Sbjct: 764 GTCNLLLVYVTINATGDSLNTDGIHMGRSTGVNISDAIIKTGDDSLSIGDGSQHINVEKV 823
Query: 123 ----GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NI 155
GHGISVGSLGK N+E VVG+TV+NCT T +I
Sbjct: 824 TCGPGHGISVGSLGKYHNEEPVVGVTVKNCTLINTMNGIRVKTWPDSPASVATDLHFEDI 883
Query: 156 VTNNVENPIVIDQLYCPYNKCNIKV 180
+ NNV NPI+I+Q YCPY++C K
Sbjct: 884 IMNNVGNPILINQEYCPYDQCQAKA 908
>gi|147835151|emb|CAN65676.1| hypothetical protein VITISV_002011 [Vitis vinifera]
Length = 587
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 148/255 (58%), Gaps = 58/255 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNFL +S I I S DS+ FHIN+LGC N+ + ITA DS NT+GIHIG S G
Sbjct: 337 INLRFNFLTNSIIKDITSKDSKQFHINVLGCRNITFFQVAITAPEDSQNTDGIHIGRSRG 396
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+HS I TGDDCVS+ GHGISVGSLG N+ V+G+ V+NCT
Sbjct: 397 VNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGISVGSLGLYKNEAPVIGIRVKNCT 456
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
+ T +IV NNV NPI+IDQ YCP+N+CN++VPS+VK
Sbjct: 457 LSDTTNGVRVKTYPSSPQGTATEMHFHDIVMNNVSNPIIIDQEYCPHNQCNLQVPSRVKL 516
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT--SLCSN 234
SN+ F NIRGT++ ++ PCQ + +GNI ++K GPE T S C N
Sbjct: 517 SNISFKNIRGTTSTELAVNLVCSKGAPCQKVELGNI-------DLKYTGPEGTASSQCKN 569
Query: 235 VKPTLFGKQIPATCV 249
V+ TL+G Q P TC
Sbjct: 570 VEATLWGTQQPKTCA 584
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 88/162 (54%), Gaps = 39/162 (24%)
Query: 79 LKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG--------------- 123
+ L + I A DS NT+GIH+G S G IS ++I TGDD +S+G
Sbjct: 1 MTLQYVTINATRDSLNTDGIHMGRSTGVNISDAIIKTGDDSLSIGDGSQHINVEKVTCGP 60
Query: 124 -HGISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNN 159
HGISVGSLGK N+E VVG+TV+NCT T +I+ NN
Sbjct: 61 GHGISVGSLGKYHNEEPVVGVTVKNCTLINTMNGIRVKTWPDSPASVATDLHFEDIIMNN 120
Query: 160 VENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK 201
V NPI+I+Q YCPY++C KVPSQVK S+V F I S +
Sbjct: 121 VGNPILINQEYCPYDQCQAKVPSQVKISDVSFQGICSMSGTQ 162
Score = 40.0 bits (92), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
F+V +GA ADG D S+A TAW AC I S V++P G Y
Sbjct: 217 FDVTKYGAQADGKTDISQALLTAWEAACA-SPIVSRVVIPAGIY 259
>gi|359485871|ref|XP_003633345.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
gi|296084979|emb|CBI28394.3| unnamed protein product [Vitis vinifera]
Length = 396
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/279 (41%), Positives = 157/279 (56%), Gaps = 64/279 (22%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
++ WR+ C+ K +P +++RFNFL +S I I S DS+ FHIN+L C N+
Sbjct: 128 QSVWRQKCS--RTKYCHQLP----INLRFNFLTNSIIKDITSKDSKQFHINVLRCRNITF 181
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ ITA DS NT+GIHIG S G I+HS I TGDDCVS+ GHG
Sbjct: 182 FQVAITAPEDSQNTDGIHIGRSRGVNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHG 241
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVEN 162
ISVGSLG N+ V+G+ V+NCT + T +IV NNV N
Sbjct: 242 ISVGSLGLYKNEAPVIGIRVKNCTLSDTTNGVRVKTWPSSPQGTATEMHFHDIVMNNVSN 301
Query: 163 PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNI 212
PI+IDQ YCP+N+CN+++PS+VK SN+ F NIRGT++ ++ PCQ + +GNI
Sbjct: 302 PIIIDQEYCPHNQCNLQIPSRVKLSNISFKNIRGTTSTELAVNLVCSKGAPCQKVELGNI 361
Query: 213 NWVYNGVNVKVEGPETT--SLCSNVKPTLFGKQIPATCV 249
++K GPE T S C NV+ TL+G Q P TC
Sbjct: 362 -------DLKYTGPEGTASSQCKNVEATLWGTQQPKTCA 393
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
F+V +GA ADG D S+A TAW AC I S V++P G Y
Sbjct: 26 FDVTKYGAQADGKTDISQALLTAWEAACA-SPIASRVVIPAGIY 68
>gi|225446736|ref|XP_002282594.1| PREDICTED: polygalacturonase [Vitis vinifera]
Length = 395
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/252 (44%), Positives = 150/252 (59%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A +S NT+GIHIG S+G
Sbjct: 148 INLRFNFITNSMVKDITSRDSKQFHINLLGCKNLTFYNIVISAPQESLNTDGIHIGRSSG 207
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+ S I TGDDCVS+ GHGISVGSLGK N+E VVG++V+NCT
Sbjct: 208 INITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISVKNCT 267
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T T +IV NNV NPI+IDQ YCP+N+CN+K PS++K
Sbjct: 268 LTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPSRIKI 327
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SNV F NIRGT++ + +PC ++ +G+IN YNG EGP S C N+K
Sbjct: 328 SNVSFRNIRGTTSTQVAVKLICSQGVPCHDVELGDINLEYNG----NEGP-AMSQCKNIK 382
Query: 237 PTLFGKQIPATC 248
P L G Q+P C
Sbjct: 383 PNLLGVQLPRIC 394
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+F+V +GA DG D S+A AW +AC+ + S V++P G Y
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTY 70
>gi|296084975|emb|CBI28390.3| unnamed protein product [Vitis vinifera]
Length = 452
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 111/247 (44%), Positives = 149/247 (60%), Gaps = 54/247 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A +S NT+GIHIG S+G
Sbjct: 148 INLRFNFITNSMVKDITSRDSKQFHINLLGCKNLAFYNVAISAPDESLNTDGIHIGRSSG 207
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+ S I TGDDCVS+ GHGISVGSLGK N+E VVG++V+NCT
Sbjct: 208 INITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISVKNCT 267
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T T +IV NNV NPI+IDQ YCP+N+CN+K PS++K
Sbjct: 268 LTNTQNGVRVKTFPASHQGIASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPSRIKL 327
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SNV F NIRGT++ + +PCQ++ +G+IN YNG EGP S C N+K
Sbjct: 328 SNVSFRNIRGTTSTQVAVKLLCSQGVPCQDVELGDINLKYNG----KEGP-AMSQCKNIK 382
Query: 237 PTLFGKQ 243
P L G++
Sbjct: 383 PNLLGQE 389
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+F+V +GA ADG D S+A AW ++C+ + S V++P G Y
Sbjct: 27 IFDVTKYGARADGHSDISQALLKAWGDSCS-SPVASTVMIPNGTY 70
>gi|302143491|emb|CBI22052.3| unnamed protein product [Vitis vinifera]
Length = 1080
Score = 196 bits (497), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/249 (44%), Positives = 149/249 (59%), Gaps = 54/249 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A +S NT+GIHIG S+G
Sbjct: 148 INLRFNFITNSMVKDITSRDSKQFHINLLGCKNLTFYNIVISAPQESLNTDGIHIGRSSG 207
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+ S I TGDDCVS+ GHGISVGSLGK N+E VVG++V+NCT
Sbjct: 208 INITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISVKNCT 267
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T T +IV NNV NPI+IDQ YCP+N+CN+K PS++K
Sbjct: 268 LTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPSRIKI 327
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SNV F NIRGT++ + +PC ++ +G+IN YNG EGP S C N+K
Sbjct: 328 SNVSFRNIRGTTSTQVAVKLICSQGVPCHDVELGDINLEYNG----NEGP-AMSQCKNIK 382
Query: 237 PTLFGKQIP 245
P L G Q+P
Sbjct: 383 PNLLGVQLP 391
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+F+V +GA DG D S+A AW +AC+ + S V++P G Y
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTY 70
>gi|91806395|gb|ABE65925.1| polygalacturonase/pectinase [Arabidopsis thaliana]
Length = 280
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/254 (43%), Positives = 149/254 (58%), Gaps = 55/254 (21%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+ SIRF+F+ ++ I I S+D++ FHIN+LG N+ +++K+ A A+SPNT+GIH+G S
Sbjct: 18 FPSIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSE 77
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
G +I +S IATGDDC+S+ GHGISVGSLG+ +++++V G+TV NC
Sbjct: 78 GVKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNC 137
Query: 149 TFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
T GT NI+ NNV NPI+IDQ YCP+N+CN + PS +
Sbjct: 138 TLQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTI 197
Query: 185 KTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
K ++ F NIRGTS NK PC N+ IGNIN Y G +GP T +CSN
Sbjct: 198 KLVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKG----ADGPPTF-MCSN 252
Query: 235 VKPTLFGKQIPATC 248
V P L G Q P C
Sbjct: 253 VSPKLVGTQNPKAC 266
>gi|15231878|ref|NP_187441.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6648196|gb|AAF21194.1|AC013483_18 putative polygalacturonase [Arabidopsis thaliana]
gi|332641089|gb|AEE74610.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 401
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 149/253 (58%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ ++ I I S+D++ FHIN+LG N+ +++K+ A A+SPNT+GIH+G S G
Sbjct: 140 ISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEG 199
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I +S IATGDDC+S+ GHGISVGSLG+ +++++V G+TV NCT
Sbjct: 200 VKILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCT 259
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
GT NI+ NNV NPI+IDQ YCP+N+CN + PS +K
Sbjct: 260 LQGTDNGLRIKTWPSAACATTASGIHFENIILNNVSNPILIDQEYCPWNQCNKQKPSTIK 319
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
++ F NIRGTS NK PC N+ IGNIN Y G +GP T +CSNV
Sbjct: 320 LVDISFKNIRGTSGNKDAVKLLCSKAHPCANVEIGNINLEYKG----ADGPPTF-MCSNV 374
Query: 236 KPTLFGKQIPATC 248
P L G Q P C
Sbjct: 375 SPKLVGTQNPKAC 387
>gi|15238902|ref|NP_199625.1| putative polygalacturonase / pectinase [Arabidopsis thaliana]
gi|8777404|dbj|BAA96994.1| polygalacturonase [Arabidopsis thaliana]
gi|26452386|dbj|BAC43278.1| putative polygalacturonase [Arabidopsis thaliana]
gi|32441260|gb|AAP81805.1| At5g48140 [Arabidopsis thaliana]
gi|332008240|gb|AED95623.1| putative polygalacturonase / pectinase [Arabidopsis thaliana]
Length = 395
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 147/253 (58%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ D+ I GI S+D+++FHIN++G N+ D+KI A A+SPNT+GIH+G S+G
Sbjct: 139 ISIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I +S I+TGDDCVS+ GHGIS+GSLG+ ++E V G+ + NCT
Sbjct: 199 IKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T NI+ NV NPI+IDQ YCP+N+CN + PS +K
Sbjct: 259 LQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+N+ F IRGTS NK PCQN+ +G++N Y G +GP T CSNV
Sbjct: 319 LANISFKKIRGTSGNKDAVKLLCSKGYPCQNVEVGDVNIQYTG----ADGPATFQ-CSNV 373
Query: 236 KPTLFGKQIPATC 248
P L G QIP C
Sbjct: 374 SPKLVGTQIPKAC 386
>gi|302143489|emb|CBI22050.3| unnamed protein product [Vitis vinifera]
Length = 414
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 147/245 (60%), Gaps = 54/245 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNF+ +S + I S DS+ FHIN+LGC NL ++ I+A +S NT+GIHIG S+G
Sbjct: 148 INLRFNFITNSMVKDITSRDSKQFHINLLGCKNLTFYNVVISAPQESLNTDGIHIGRSSG 207
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+ S I TGDDCVS+ GHGISVGSLGK N+E VVG++V+NCT
Sbjct: 208 INITDSTIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISVKNCT 267
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T T +IV NNV NPI+IDQ YCP+N+CN+K PS++K
Sbjct: 268 LTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPSRIKI 327
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SNV F NIRGT++ ++ PCQ++ +G+IN YNG EGP S C N+K
Sbjct: 328 SNVSFRNIRGTTSTQVAVKLICSQGEPCQDVELGDINLEYNG----NEGP-AMSQCKNIK 382
Query: 237 PTLFG 241
P L G
Sbjct: 383 PNLLG 387
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+F+V +GA DG D S+A AW +AC+ + S V++P G Y
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTY 70
>gi|302121712|gb|ADK92878.1| polygalacturonase [Hypericum perforatum]
Length = 398
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 144/250 (57%), Gaps = 56/250 (22%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+R L +S I I S+DS+ FHINI+ C NL L + ITA S NT+GIHIG S G
Sbjct: 149 LRMTGLTNSIIRDITSLDSKLFHINIINCKNLTLERITITAPESSLNTDGIHIGRSTGVN 208
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+ + I TGDDCVS+ GHGIS+GSLG+ +++ VVG+TV+NCT T
Sbjct: 209 ITSATIKTGDDCVSIGDGAQQINIEKVTCGPGHGISIGSLGRYHDEQPVVGITVKNCTLT 268
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T NI+ NNV NPI+IDQ YCPY++C K+PS+VK S+
Sbjct: 269 STMNGVRIKTWPASPSGLASNMRFENIIMNNVSNPIMIDQQYCPYSQCEAKIPSRVKISD 328
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F+ IRGTSA + IPCQN+ +G+IN YN +G + TS C+NVKP
Sbjct: 329 VSFSGIRGTSATQLAVKLVCSKGIPCQNVAVGDINLAYN------KG-QATSQCANVKPQ 381
Query: 239 LFGKQIPATC 248
+ G +PA C
Sbjct: 382 VRGSVVPAPC 391
>gi|449532115|ref|XP_004173029.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 423
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/253 (43%), Positives = 148/253 (58%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++ NF+ +S +TGI S+DS+ FHIN+LGC NL + + ITA +SPNT+GIH+ SS
Sbjct: 164 MNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQ 223
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ IATGDDC+S+ GHGIS+GSLGK ++EVVG+TV+ C
Sbjct: 224 INILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCK 283
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
TGT +I +NV NPI+IDQ YCP+N+CN KV S++K
Sbjct: 284 LTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVASKIK 343
Query: 186 TSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
SNV F NIRGTSA IPC+ + I +I+ Y+G EGP S C+NV
Sbjct: 344 ISNVSFKNIRGTSATAIAVKIVCSKSIPCEGVEIADIDLTYSG----PEGP-IKSQCANV 398
Query: 236 KPTLFGKQIPATC 248
KP + GKQ P C
Sbjct: 399 KPVITGKQNPPIC 411
>gi|51316214|sp|Q6H9K0.1|PGLR2_PLAAC RecName: Full=Exopolygalacturonase; AltName: Full=Pollen allergen
Pla a 2; AltName: Allergen=Pla a 2; Flags: Precursor
gi|49523394|emb|CAE52833.1| polygalacturonase [Platanus x acerifolia]
Length = 377
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 146/250 (58%), Gaps = 54/250 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF+FL + + I S++S+ FHIN+L C ++ + +TA S NT+GIH+G S G
Sbjct: 129 MNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKG 188
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+++ IATGDDC+S+ GHGIS+GSLG+ N++EV G+TV+ CT
Sbjct: 189 VTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCT 248
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
F+GT ++ NNV+NP+++DQ YCPY +C+ + PS++K
Sbjct: 249 FSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKL 308
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SN+ FNNIRGTS K+ PC N+ IG IN Y G G TS CSNVK
Sbjct: 309 SNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGA-----GGPATSTCSNVK 363
Query: 237 PTLFGKQIPA 246
PT GKQ+PA
Sbjct: 364 PTFSGKQVPA 373
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV D+GA G D S+A AW+ AC G S VL+P G Y
Sbjct: 9 VFNVNDYGA--KGAGDISQAVMKAWKAACASQG-PSTVLIPKGNY 50
>gi|297795453|ref|XP_002865611.1| hypothetical protein ARALYDRAFT_494865 [Arabidopsis lyrata subsp.
lyrata]
gi|297311446|gb|EFH41870.1| hypothetical protein ARALYDRAFT_494865 [Arabidopsis lyrata subsp.
lyrata]
Length = 395
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 146/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ ++ I GI S+D++ FHIN++G N+ D+KI A A+SPNT+GIH+G S+G
Sbjct: 139 ISIRFDFVTNAKIRGITSLDAKNFHINVIGAKNMTFEDVKIIAPAESPNTDGIHVGRSDG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I +S I+TGDDCVS+ GHGIS+GSLG+ ++E V G+ + NCT
Sbjct: 199 IKIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T NI+ NV NPI+IDQ YCP+N+CN + PS +K
Sbjct: 259 LQETDNGLRIKTWPSAACTTTASDIHFENILLKNVSNPILIDQEYCPWNQCNKQKPSTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+N+ F IRGTS NK PCQN+ +G+IN Y G +GP T CSNV
Sbjct: 319 LANISFKKIRGTSGNKDAVKLLCSKGHPCQNVEVGDINIKYTG----ADGPATFQ-CSNV 373
Query: 236 KPTLFGKQIPATC 248
P L G QIP C
Sbjct: 374 SPKLVGTQIPKAC 386
>gi|449517822|ref|XP_004165943.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 405
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/253 (43%), Positives = 144/253 (56%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RF+F+ +S + I S+DS+ FH+NILGC NL + I A DSPNT+GIHIG S G
Sbjct: 149 ISLRFDFITNSIVKRITSLDSKNFHVNILGCNNLTFKGVNIIAPEDSPNTDGIHIGRSIG 208
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I S IATGDDC+SL GHGIS+GSLGK N+E V G+ V+NCT
Sbjct: 209 ISILKSQIATGDDCISLGDGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVEGVIVKNCT 268
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I NV NPI+IDQ YCP+N+CN ++PS +K
Sbjct: 269 IMNTTNGVRIKTWPASPNAGIATDMHFSDITMVNVSNPILIDQEYCPWNQCNREIPSNIK 328
Query: 186 TSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+NV F NIRG+SA + PC+ + + NI+ VYNG+N GP TS C NV
Sbjct: 329 INNVSFKNIRGSSATPVAVKLICSSNQPCEEVKVANIDLVYNGIN----GP-ITSQCMNV 383
Query: 236 KPTLFGKQIPATC 248
KP + G Q P+ C
Sbjct: 384 KPIVSGIQNPSIC 396
>gi|449500199|ref|XP_004161033.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 405
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/253 (44%), Positives = 145/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RF+F+ +S + GI S+DS+ FH+NILGC NL + I A DSPNT+GIHIG S G
Sbjct: 149 ISLRFDFITNSIVRGITSLDSKNFHVNILGCNNLTFQGVNIIAPEDSPNTDGIHIGRSIG 208
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I S IATGDDC+SL GHGIS+GSLGK N+E V + V+NCT
Sbjct: 209 ISILKSRIATGDDCISLGDGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVDDVVVKNCT 268
Query: 150 FTGTN---------------IVTN---------NVENPIVIDQLYCPYNKCNIKVPSQVK 185
T I TN NV NPI+IDQ YCP+N+CN ++PS +K
Sbjct: 269 IMNTTNGIRIKTWPSSPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNREIPSNIK 328
Query: 186 TSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+NV F NI+G+SA + PC+ + + NI+ VYNG+N GP TS C NV
Sbjct: 329 INNVSFKNIKGSSATPVAVKLICSSNKPCEEVKVANIDLVYNGIN----GP-VTSQCMNV 383
Query: 236 KPTLFGKQIPATC 248
KP + G Q P+ C
Sbjct: 384 KPIISGIQNPSIC 396
>gi|449453736|ref|XP_004144612.1| PREDICTED: exopolygalacturonase clone GBGA483-like [Cucumis
sativus]
gi|449506926|ref|XP_004162886.1| PREDICTED: exopolygalacturonase clone GBGA483-like [Cucumis
sativus]
Length = 402
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/252 (43%), Positives = 142/252 (56%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RF LN+S I I S DS++FH+N+ C NL L ++ I A DSPNT+GIHIG S+G
Sbjct: 150 ISLRFYSLNNSLIKDITSTDSKFFHVNVHNCRNLTLQNINIDAPGDSPNTDGIHIGGSSG 209
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ I TGDDCVS+ GHGIS+GSLGK N++ V G+TVR+CT
Sbjct: 210 VTIHNARIKTGDDCVSIGDGSQQIKVEKVTCGPGHGISIGSLGKYKNEKPVSGITVRDCT 269
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T T +IV NNV PI+IDQ YCPY CN ++PS+V+
Sbjct: 270 ITNTMFGVRIKSWPASTKGIASNMQFESIVMNNVGTPILIDQQYCPYGTCNRQIPSRVQI 329
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SNV F NIRGTS ++ PC+N+ + NIN Y+G N S CSNVK
Sbjct: 330 SNVGFKNIRGTSTTQVAVKLVCSRGYPCKNVKLSNINLKYSGTN-----GTAISECSNVK 384
Query: 237 PTLFGKQIPATC 248
P + G +P C
Sbjct: 385 PAIAGSVVPPAC 396
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFN 51
F+VK +GA A+G DDS+A AW++AC+ S +++P G+Y+ S++F
Sbjct: 29 FHVKRYGARANGNSDDSQAIMKAWKDACS-STKPSKIVIPGGRYVVDSMKFQ 79
>gi|310753534|gb|ADP09681.1| polygalacturonase [Cucurbita pepo]
Length = 416
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/254 (42%), Positives = 144/254 (56%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++FNF+ +S + I S+DS+ FHIN+L NL + LKITA +SPNT+GIH+G S
Sbjct: 156 MNLKFNFITNSIVKDITSLDSKNFHINVLAGKNLTFDHLKITAPHNSPNTDGIHLGDSED 215
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ IATGDDC+S+ GHGIS+GSLGK ++EVVG+TV+ C
Sbjct: 216 VYILNTAIATGDDCISVGYTNRKITISDVTCGPGHGISIGSLGKYKTEKEVVGVTVKKCK 275
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
GT +I NV NPI+IDQ YCP+N+CN KVPS +K
Sbjct: 276 LIGTTNGVRIKSWPDSAVSYPASDMHFEDIEMENVANPIIIDQEYCPWNQCNRKVPSAIK 335
Query: 186 TSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NIRGTS+ + PC+ + I +I+ Y+G EGP S CSNV
Sbjct: 336 ISKVSFKNIRGTSSTPVAVKLVCSKSNPCEGVEIADIDLTYSG----KEGP-AVSECSNV 390
Query: 236 KPTLFGKQIPATCV 249
KPT+ GKQ P C
Sbjct: 391 KPTISGKQNPPICA 404
>gi|119351604|gb|ABL63521.1| pollen-specific protein MF9l [Brassica oleracea var. alboglabra]
Length = 395
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 145/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ ++ I I S+D++ FHIN+LG N+ ++ + I A DSPNT+GIH+G S+G
Sbjct: 139 ISIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTMDHINIIAPKDSPNTDGIHLGRSDG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ I+TGDDC+S+ GHGISVGSLG+ N+++V G+ V NCT
Sbjct: 199 VKILNTFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGNEQDVSGIRVINCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T NI+ NV NPI+IDQ YCP+N+CN + PS +K
Sbjct: 259 LQQTDNGLRIKTWPSAACSTTASDIHFENIIVKNVMNPILIDQEYCPWNQCNKQKPSTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+N+ F IRGTS NK PCQN+ IG+I+ YNG +GP T CSNV
Sbjct: 319 LANISFKQIRGTSGNKDAVKLLCSRGYPCQNVEIGDIDIRYNG----ADGPATFQ-CSNV 373
Query: 236 KPTLFGKQIPATC 248
P L G Q P C
Sbjct: 374 SPKLMGTQSPKAC 386
>gi|449476536|ref|XP_004154764.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 406
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 111/251 (44%), Positives = 143/251 (56%), Gaps = 55/251 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+RF+F+ +S + GI S+DS+ FH+NILGC NL + I A DSPNT+GIHIG S G
Sbjct: 152 LRFDFITNSIVRGITSLDSKNFHVNILGCNNLTFQGVNIIAPEDSPNTDGIHIGRSIGIS 211
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I S IATGDDC+SL GHGIS+GSLGK N+E V + V+NCT
Sbjct: 212 ILKSRIATGDDCISLGDGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVDDVVVKNCTIM 271
Query: 152 GTN---------------IVTN---------NVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T I TN NV NPI+IDQ YCP+N+CN ++PS +K +
Sbjct: 272 NTTNGVRIKTWPSSPVAGIATNMHFSDITMINVSNPILIDQEYCPWNQCNREIPSNIKIN 331
Query: 188 NVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
NV F NI+G+SA + PC+ + + NI+ VYNG+N GP TS C NVKP
Sbjct: 332 NVSFKNIKGSSATPVAVKLICSSNQPCEEVKVANIDLVYNGIN----GP-VTSQCMNVKP 386
Query: 238 TLFGKQIPATC 248
+ G Q P+ C
Sbjct: 387 IISGIQNPSIC 397
>gi|359494519|ref|XP_003634794.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 393
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/252 (42%), Positives = 148/252 (58%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNF+ +S + I S DS+ F +N+LGC NL ++ I+A S NT+GIHIG S+G
Sbjct: 148 INLRFNFITNSMVKDITSRDSKQFQMNLLGCKNLTFYNVGISAPEVSINTDGIHIGRSSG 207
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I++S + TGDDCVS+ G+GISVGSLGK N+E VVG++V+NCT
Sbjct: 208 FNITNSTVETGDDCVSIGDGSEQINIQSVTCGPGYGISVGSLGKCPNEEPVVGISVKNCT 267
Query: 150 FTGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
FT N IV N+V NP + DQ YCP+N+CN+K PS++K
Sbjct: 268 FTXQNGMRVKTWPTSHQGTASKMHFEDIVXNDVANPKIKDQEYCPHNQCNLKSPSRIKLX 327
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
V F NIRGT++ + +PCQ++ +G+IN YN + EGP S C N+KP
Sbjct: 328 -VSFRNIRGTTSTQVVVKLVCDQGVPCQDVELGDINLKYN----ENEGP-AMSXCKNIKP 381
Query: 238 TLFGKQIPATCV 249
L GKQ+P TC
Sbjct: 382 NLLGKQLPRTCA 393
>gi|109693361|gb|ABG38467.1| pollen-expressed protein MF6t [Brassica juncea]
Length = 397
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 150/276 (54%), Gaps = 60/276 (21%)
Query: 24 AWREA-CNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
AWR C+ + +P +SIRF+F+ D+ I GI S+DS+ FHIN+LG N+ L
Sbjct: 121 AWRANNCHKMALTQCKKLP----ISIRFDFVTDAKIRGITSLDSKNFHINVLGARNMTLE 176
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGI 126
++ I A +SPNT+GIH+G S G +I +S I TGDDC+S+ GHGI
Sbjct: 177 EITIIAPEESPNTDGIHVGRSVGVQIINSNIKTGDDCISIGDGTRDLLVERVTCGPGHGI 236
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVEN 162
S+GSLG + +E+V G+ V N T T NI+ NV N
Sbjct: 237 SIGSLGLYVKEEDVTGIRVVNSTLINTDNGVRIKTWPSAACSTTASGIHFENIILKNVTN 296
Query: 163 PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNI 212
PI+IDQ YCP+N+CN PS +K ++ F +IRGTS NK PC+N+ IG+I
Sbjct: 297 PILIDQEYCPWNRCNKNKPSTIKLVDISFKHIRGTSGNKDAVKLLCSKGFPCKNVQIGDI 356
Query: 213 NWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
+ Y G +GP T CSNV PTL G Q+P C
Sbjct: 357 DIKYTG----ADGPATFQ-CSNVSPTLMGTQVPKAC 387
>gi|15231874|ref|NP_187439.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6648194|gb|AAF21192.1|AC013483_16 polygalacturonase (PGA3) [Arabidopsis thaliana]
gi|17529010|gb|AAL38715.1| putative polygalacturonase(PGA3 [Arabidopsis thaliana]
gi|20465449|gb|AAM20184.1| putative polygalacturonase (PGA3) [Arabidopsis thaliana]
gi|21593171|gb|AAM65120.1| polygalacturonase PGA3 [Arabidopsis thaliana]
gi|332641087|gb|AEE74608.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 391
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 146/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ +S I I S+D++ FHIN+LG N+ +N++KI A DSPNT+GIH+G S+G
Sbjct: 139 ISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I +S I+TGDDC+S+ GHGISVGSLG+ ++++V G+ V NCT
Sbjct: 199 VKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I+ +V NPI+IDQ YCP+N+CN + S +K
Sbjct: 259 LQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
N+ F NIRGTS NK PCQN+ IG+I+ YNG +GP T CSNV
Sbjct: 319 LVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNG----ADGPATFH-CSNV 373
Query: 236 KPTLFGKQIPATC 248
P + G Q P C
Sbjct: 374 SPKILGSQSPKAC 386
>gi|109693363|gb|ABG38468.1| pollen-expressed protein MF9c [Brassica oleracea]
Length = 395
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 145/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RF+F+ ++ I I S+D++ FHIN+LG N+ ++ + I A DSPNT+GIH+G S+G
Sbjct: 139 ISVRFDFVENAEIRDISSIDAKNFHINVLGAKNMTMDHINIIAPKDSPNTDGIHLGRSDG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ I+TGDDC+S+ GHGISVGSLG+ N+++V G+ V NCT
Sbjct: 199 VKILNTFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGNEQDVSGIRVINCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T NI+ NV NPI+IDQ YCP+N+CN + PS +K
Sbjct: 259 LQQTDNGLRIKTWPSAACSTTASDIHFENIIVKNVMNPILIDQEYCPWNQCNKQKPSTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+N+ F IRGTS NK PCQN+ IG+I+ Y+G +GP T CSNV
Sbjct: 319 LANISFKQIRGTSGNKDAVKLLCSRGYPCQNVEIGDIDIRYSG----ADGPATFQ-CSNV 373
Query: 236 KPTLFGKQIPATC 248
P L G Q P C
Sbjct: 374 SPKLMGTQSPKAC 386
>gi|124518467|gb|ABN13878.1| polygalacturonase [Brassica rapa subsp. campestris]
Length = 395
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 145/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ ++ I I S+D++ FHIN+LG N+ ++ + I A DSPNT+GIH+G S+G
Sbjct: 139 ISIRFDFVENAEIKDISSIDAKNFHINVLGAKNMTMDHINIIAPKDSPNTDGIHLGRSDG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ I+TGDDC+S+ GHGISVGSLG+ N+++V G+ V NCT
Sbjct: 199 VKILNTFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGNEQDVSGIRVINCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T NI+ NV NPI+IDQ YCP+N+CN + PS +K
Sbjct: 259 LQQTDNGLRIKTWPSAACSTTASDIHFENIILKNVMNPILIDQEYCPWNQCNKQKPSTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+N+ F IRGTS NK PCQN+ IG+I+ Y+G +GP T CSNV
Sbjct: 319 LANISFKQIRGTSGNKDAVKLLCSRGYPCQNVEIGDIDIRYSG----ADGPATFQ-CSNV 373
Query: 236 KPTLFGKQIPATC 248
P L G Q P C
Sbjct: 374 SPKLMGTQSPKAC 386
>gi|2982583|emb|CAA05892.1| polygalacturonase [Arabidopsis thaliana]
gi|3152948|emb|CAA06610.1| polygalacturonase [Arabidopsis thaliana]
Length = 391
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 146/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ +S I I S+D++ FHIN+LG N+ +N++KI A DSPNT+GIH+G S+G
Sbjct: 139 ISIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I +S I+TGDDC+S+ GHGISVGSLG+ ++++V G+ V NCT
Sbjct: 199 IKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I+ +V NPI+IDQ YCP+N+CN + S +K
Sbjct: 259 LQETDNGLRIKTWPSAACSTTASDIHFEDIILKDVSNPILIDQEYCPWNQCNKQKASTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
N+ F NIRGTS NK PCQN+ IG+I+ YNG +GP T CSNV
Sbjct: 319 LVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNG----ADGPATFH-CSNV 373
Query: 236 KPTLFGKQIPATC 248
P + G Q P C
Sbjct: 374 SPKILGSQSPKAC 386
>gi|297833574|ref|XP_002884669.1| hypothetical protein ARALYDRAFT_478121 [Arabidopsis lyrata subsp.
lyrata]
gi|297330509|gb|EFH60928.1| hypothetical protein ARALYDRAFT_478121 [Arabidopsis lyrata subsp.
lyrata]
Length = 397
Score = 184 bits (467), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 145/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ ++ I I S+D++ FHIN++G N+ N++KI A A+SPNT+GIH+G S G
Sbjct: 140 VSIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFNNVKIMAPAESPNTDGIHLGRSVG 199
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I +S IATGDDCVS+ GHGISVGSLG+ ++++V G+ V NCT
Sbjct: 200 VSIINSRIATGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCT 259
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T NI+ NV NPI+IDQ YCP+N+CN + S +K
Sbjct: 260 LQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIK 319
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+N+ F IRGTS NK PC+N+ +G+IN Y G +GP T +CSNV
Sbjct: 320 LANISFKRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTG----ADGP-ATFMCSNV 374
Query: 236 KPTLFGKQIPATC 248
+P L G Q P C
Sbjct: 375 RPKLVGTQFPKAC 387
>gi|449529716|ref|XP_004171844.1| PREDICTED: polygalacturonase-like, partial [Cucumis sativus]
Length = 256
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/252 (43%), Positives = 141/252 (55%), Gaps = 55/252 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+RFNF+ +S + I S+DS+ FH+NILGC NL + I A DSPNT+GIHIG S G
Sbjct: 1 SLRFNFVTNSIVRRITSLDSKNFHVNILGCNNLTFQGVNIIAPGDSPNTDGIHIGRSIGI 60
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I S IATGDDC+SL GHGIS+GSLGK N+E V + V+NCT
Sbjct: 61 SILKSRIATGDDCISLGDGSKRIKVNNVTCGPGHGISIGSLGKYTNEEPVEDVIVKNCTI 120
Query: 151 TGTN---------------IVTN---------NVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T I TN NV NPIVIDQ YCP+N+CN K+PS +K
Sbjct: 121 INTTNGVRIKTWPTSPAAGIATNMHFSDITMVNVSNPIVIDQEYCPWNQCNRKIPSNIKI 180
Query: 187 SNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+ V F NIRG+SA + +PC+ + + NI+ +YNG+ + TS C NVK
Sbjct: 181 NKVSFKNIRGSSATPVAVKLICSSNLPCEEVKLSNIDLIYNGIKGSI-----TSQCMNVK 235
Query: 237 PTLFGKQIPATC 248
P ++G Q P C
Sbjct: 236 PIIYGIQNPPIC 247
>gi|228205057|gb|ACP74159.1| putative polygalacturonase [Brassica rapa subsp. campestris]
Length = 397
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 142/253 (56%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ D+ I GI S+DS+ FHIN+LG N+ L ++ I A +SPNT+GIH+G S G
Sbjct: 140 ISIRFDFVTDAKIRGITSLDSKNFHINVLGARNMTLEEITIIAPEESPNTDGIHVGRSVG 199
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I +S I TGDDC+S+ GHGIS+GSLG + +E+V G+ V N T
Sbjct: 200 VQIINSNIKTGDDCISIGDGTRDLLVERVTCGPGHGISIGSLGLYVKEEDVTGIRVVNST 259
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T NI+ NV NPI+IDQ YCP+N+CN PS +K
Sbjct: 260 LINTDNGVRIKTWPSAACSTTASGIHFENIILKNVTNPILIDQEYCPWNRCNKNKPSTIK 319
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
++ F +IRGTS NK PC+N+ IG+I+ Y G +GP T CSNV
Sbjct: 320 LVDISFKHIRGTSGNKDAVKLLCSKGFPCKNVQIGDIDIKYTG----ADGPATFQ-CSNV 374
Query: 236 KPTLFGKQIPATC 248
PTL G Q+P C
Sbjct: 375 SPTLMGTQVPKAC 387
>gi|297833572|ref|XP_002884668.1| polygalacturonase 3 [Arabidopsis lyrata subsp. lyrata]
gi|297330508|gb|EFH60927.1| polygalacturonase 3 [Arabidopsis lyrata subsp. lyrata]
Length = 391
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 105/253 (41%), Positives = 146/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ +S I I S+D++ FHIN+LG N+ ++++KI A +SPNT+GIH+G S+G
Sbjct: 139 ISIRFDFVLNSEIRDISSIDAKNFHINVLGAKNMTMDNIKIIAPEESPNTDGIHLGRSDG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I +S I+TGDDC+S+ GHGISVGSLG+ ++++V G+ + NCT
Sbjct: 199 VKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKIINCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I+ NV NPI+IDQ YCP+N+CN + S +K
Sbjct: 259 LQETDNGLRIKTWPSAACSTTASDIHFEDIIVKNVSNPILIDQEYCPWNQCNKQKASTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
N+ F NIRGTS NK PCQN+ IG+I+ YNG +GP T CSNV
Sbjct: 319 LVNISFKNIRGTSGNKDAVKLLCSKGYPCQNVEIGDIDIKYNG----ADGPATFQ-CSNV 373
Query: 236 KPTLFGKQIPATC 248
P L G Q P C
Sbjct: 374 SPKLLGSQSPKAC 386
>gi|162949338|gb|ABY21306.1| pollen allergen Pla o 2 [Platanus orientalis]
Length = 378
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 145/255 (56%), Gaps = 57/255 (22%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
PP ++IRFNFL ++ + I S++S+ FHIN+L C N+ + I+A S NT+GIHI
Sbjct: 128 PP---MNIRFNFLKNAVVRDITSMNSKMFHINVLECDNISFQHVTISAPGTSINTDGIHI 184
Query: 101 GSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT 144
G S G I+ + IATGDDCVS+ GHGISVGSLGK ++++V G+T
Sbjct: 185 GLSRGVTITDTNIATGDDCVSIGPGSQNVTVTKVNCGPGHGISVGSLGKYKDEKDVRGIT 244
Query: 145 VRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
V CTFTGT ++ NV+NP+++DQ YCPY +C++K P
Sbjct: 245 VTGCTFTGTSNGVRVKTWPDSPPGVATDMAFEDLTMKNVQNPVILDQEYCPYGQCSLKAP 304
Query: 182 SQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSL 231
S+VK SN++FNNIRGTS ++ PC N+ IG IN + + G S
Sbjct: 305 SRVKLSNIKFNNIRGTSSGPDAIVIACSHGFPCSNLEIGEIN-----LALHAAGAPANST 359
Query: 232 CSNVKPTLFGKQIPA 246
C+N KP GKQ+PA
Sbjct: 360 CTNAKPIFSGKQVPA 374
Score = 36.6 bits (83), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV D+GA G D S+A AW AC G S VL+P G Y+
Sbjct: 11 FNVNDYGAKGSG--DISQAVMKAWEAACASPG-PSTVLIPTGNYI 52
>gi|449520515|ref|XP_004167279.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 404
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 142/253 (56%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RF+F+ +S + I S++S+ FH+NILGC NL + I A DSPNT+GIHIG S G
Sbjct: 149 ISLRFDFITNSIVRRITSLNSKNFHVNILGCNNLTFQGVNIIAPEDSPNTDGIHIGRSIG 208
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I S IATGDDC+SL GHGIS+GSLGK N+E V G+ V+NCT
Sbjct: 209 ISILKSRIATGDDCISLGDGSKQVKVANVTCGPGHGISIGSLGKYTNEEPVEGVIVKNCT 268
Query: 150 FTGTN---------------IVTN---------NVENPIVIDQLYCPYNKCNIKVPSQVK 185
T I TN NV NPI+IDQ YCP+N+CN ++PS +K
Sbjct: 269 IINTTNGVRIKTWPTSPAAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNREIPSNIK 328
Query: 186 TSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+ V F NIRG+SA + PC + + NI+ +YNG+N + TS C NV
Sbjct: 329 INKVSFENIRGSSATPVAVKLICSSNLPCDEVKVANIDLIYNGINGSI-----TSQCMNV 383
Query: 236 KPTLFGKQIPATC 248
KP + G Q P+ C
Sbjct: 384 KPIISGIQNPSIC 396
>gi|449488490|ref|XP_004158053.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Cucumis
sativus]
Length = 2882
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 145/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++ NF+ +S + I S+DS+ +HIN+LGC NL ++ + ITA +SPNT+GIH+ SS
Sbjct: 746 MTLKLNFITNSIVKDITSLDSKNYHINLLGCKNLTIDHVTITAPENSPNTDGIHVSSSEQ 805
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ IATGDDC+S+ GHGIS+GSLGK ++EVVG+TV+ C
Sbjct: 806 INILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGISIGSLGKYSKEKEVVGVTVKKCK 865
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T T +I NV NPI+IDQ YCP+N+CN KVPS++K
Sbjct: 866 LTSTTNGVRIKTWPDSVGTFPATDMHFEDIEMVNVSNPIIIDQEYCPWNQCNRKVPSKIK 925
Query: 186 TSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NIRGTSA + PC+ + + +I+ Y+G EGP S C+NV
Sbjct: 926 ISKVSFKNIRGTSATAVAVKIVCSQSNPCEEVEVADIDLTYSG----SEGP-IKSQCANV 980
Query: 236 KPTLFGKQIPATC 248
KP + GKQ P C
Sbjct: 981 KPVITGKQNPPIC 993
>gi|15231876|ref|NP_187440.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|6648195|gb|AAF21193.1|AC013483_17 putative polygalacturonase [Arabidopsis thaliana]
gi|332641088|gb|AEE74609.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 397
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 145/253 (57%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SIRF+F+ ++ I I S+D++ FHIN++G N+ +++KI A A+SPNT+GIH+G S G
Sbjct: 140 ISIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVG 199
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I +S I+TGDDCVS+ GHGISVGSLG+ ++++V G+ V NCT
Sbjct: 200 VSIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCT 259
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T NI+ NV NPI+IDQ YCP+N+CN + S +K
Sbjct: 260 LQETDNGLRIKTWPSAACSTTASNIHFENIILRNVSNPILIDQEYCPWNQCNKQKSSSIK 319
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+N+ F IRGTS NK PC+N+ +G+IN Y G +GP T +CSNV
Sbjct: 320 LANISFRRIRGTSGNKDAVKLLCSKGYPCENVQVGDINIQYTG----ADGP-ATFMCSNV 374
Query: 236 KPTLFGKQIPATC 248
+P L G Q P C
Sbjct: 375 RPKLVGTQFPKAC 387
>gi|359485801|ref|XP_003633337.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 396
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 146/254 (57%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNF+ +S + I S DS FHIN+LGC NL ++ I+A + NT+GIHIG S G
Sbjct: 148 INLRFNFITNSMVKNITSRDSNQFHINLLGCKNLTFYNVAISAPEERLNTDGIHIGRSLG 207
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I++S I TGDDCVS+ GHG SVGSLGK N+E VVG++V+NC
Sbjct: 208 INITYSTIETGDDCVSIGDGSEQINMQRVTRGPGHGXSVGSLGKXPNEEPVVGISVKNCN 267
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYC-PYNKCNIKVPSQVK 185
T T +IV NNV NPI+IDQ YC P+N+CN+K+PS++
Sbjct: 268 LTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCRPHNQCNLKIPSRIM 327
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
++V F NIRGT++ + +P +++ +G+IN YNG EG S C N+
Sbjct: 328 LNDVSFRNIRGTTSTQVAVKLVCSQGVPREDVELGDINLKYNG----KEG-HAMSQCKNI 382
Query: 236 KPTLFGKQIPATCV 249
KP L G Q+P TC
Sbjct: 383 KPNLLGTQLPRTCA 396
>gi|6714524|dbj|BAA89476.1| polygalacturonase [Salix gilgiana]
Length = 393
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/255 (41%), Positives = 145/255 (56%), Gaps = 54/255 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++IRF+F+ + + I + DS+ FH+N+LGC NL +TA A+S NT+GIHIG
Sbjct: 144 GLPMNIRFDFITNGLVRDITTRDSKNFHVNVLGCKNLTFQHFTVTAPAESINTDGIHIGR 203
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S G I S I TGDDC+S+ GHGISVGSLG+ N++ V G+ V+
Sbjct: 204 STGIYIIDSKIGTGDDCISVGDGTEELHVTRVTCGPGHGISVGSLGRYPNEKPVSGIFVK 263
Query: 147 NCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ 183
NCT + T +IV NNV+NPI++DQ+YCP+N+C++K PS+
Sbjct: 264 NCTISNTANGVRIKSWPDLYGGVASNMHFEDIVMNNVQNPILLDQVYCPWNQCSLKAPSK 323
Query: 184 VKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
VK S+V F NIRGTSA IPC+ + + NIN VY+G EGP S CS
Sbjct: 324 VKISDVSFKNIRGTSATPVVVKLACSSGIPCEKVELANINLVYSG----SEGP-AKSQCS 378
Query: 234 NVKPTLFGKQIPATC 248
NVKP + G + C
Sbjct: 379 NVKPKISGIMSASGC 393
>gi|359494515|ref|XP_003634793.1| PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Vitis
vinifera]
Length = 246
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/253 (41%), Positives = 144/253 (56%), Gaps = 62/253 (24%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+RFNF+ ++ + I S DS+ FHIN+LGC NL ++ I+A DS NT+GIHIG S+G +
Sbjct: 5 LRFNFITNNMVEDITSRDSKQFHINLLGCRNLTFYNVAISAPKDSLNTDGIHIGRSSGID 64
Query: 108 ISHSVIATGDDCVS----------------LGHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+ S I TGDDCVS LGHGI VGSLGK ++E +VG++V+NCTF
Sbjct: 65 ITDSAIETGDDCVSISDGSGQINIQRITCGLGHGICVGSLGKYPDEESMVGISVKNCTFI 124
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T +IV NNV NPI+IDQ YCP+N+CN+K S++K SN
Sbjct: 125 NTQNGVRVKTWPASHQDTTSEMHLEDIVMNNVGNPIIIDQKYCPHNQCNLKSLSRIKLSN 184
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPE--TTSLCSNVK 236
V F NI+GT++ + +PCQ++ +G+ N G E S C N+K
Sbjct: 185 VSFRNIQGTTSTQVAVKLVCSQGVPCQDVELGDNN-----------GNEGLAMSQCKNIK 233
Query: 237 PTLFGKQIPATCV 249
P L KQ+P TC
Sbjct: 234 PNLLDKQLPRTCA 246
>gi|548491|sp|Q05967.1|PGLR_TOBAC RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|22701|emb|CAA50338.1| polygalacturonase [Nicotiana tabacum]
Length = 396
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 142/250 (56%), Gaps = 54/250 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ FN L +STI I ++DS+ FH+N+ C NL ++A A+SPNT+GIH+ S+
Sbjct: 144 LSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVN 203
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+ S +TGDDC+S+ GHGISVGSLG +++ VVG+ VRNCTFT
Sbjct: 204 ITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFT 263
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T +I+ NV NP+VIDQ+YCP+NKCN +PSQVK S
Sbjct: 264 NTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISK 323
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F NI+GTS + +PC+ I +G+I+ Y+G EGP +S C N+KP+
Sbjct: 324 VSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSG----KEGPAKSS-CENIKPS 378
Query: 239 LFGKQIPATC 248
L GKQ P C
Sbjct: 379 LKGKQNPPVC 388
>gi|6714526|dbj|BAA89477.1| polygalacturonase [Salix gilgiana]
Length = 393
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 106/255 (41%), Positives = 145/255 (56%), Gaps = 54/255 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++IRF+F+ + + I + DS+ FH+N+LGC NL +TA A+S NT+GIHIG
Sbjct: 144 GLPMNIRFDFITNGLVRDITTRDSKNFHVNVLGCKNLTFQHFTVTAPAESINTDGIHIGR 203
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S G I S I TGDDC+S+ GHGISVGSLG+ N++ V G+ V+
Sbjct: 204 STGIYIIDSKIGTGDDCISVGDGTEELHVTGVTCGPGHGISVGSLGRYPNEKPVSGIFVK 263
Query: 147 NCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ 183
NCT + T +IV NNV+NPI++DQ+YCP+N+C++K PS+
Sbjct: 264 NCTISNTANGVRIKSWPDLYGGVASNMHFEDIVMNNVQNPILLDQVYCPWNQCSLKAPSK 323
Query: 184 VKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
VK S+V F NIRGTSA IPC+ + + NIN +Y+G EGP S CS
Sbjct: 324 VKISDVSFKNIRGTSATPVVVKLACSSGIPCEKVELANINLLYSG----SEGP-AKSQCS 378
Query: 234 NVKPTLFGKQIPATC 248
NVKP + G + C
Sbjct: 379 NVKPKISGIMSASGC 393
>gi|7435386|pir||S46530 polygalacturonase (EC 3.2.1.15) precursor (clone pC27.X and clone
pC27.Y) - common tobacco (fragment)
gi|1345548|emb|CAA50334.1| polygalacturonase [Nicotiana tabacum]
gi|1345549|emb|CAA50336.1| polygalacturonase [Nicotiana tabacum]
Length = 385
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 142/250 (56%), Gaps = 54/250 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ FN L +STI I ++DS+ FH+N+ C NL ++A A+SPNT+GIH+ S+
Sbjct: 133 LSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVN 192
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+ S +TGDDC+S+ GHGISVGSLG +++ VVG+ VRNCTFT
Sbjct: 193 ITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFT 252
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T +I+ NV NP+VIDQ+YCP+NKCN +PSQVK S
Sbjct: 253 NTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISK 312
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F NI+GTS + +PC+ I +G+I+ Y+G EGP +S C N+KP+
Sbjct: 313 VSFQNIKGTSRTQDAVSLLCSKGVPCEGIEVGDIDITYSG----KEGPAKSS-CENIKPS 367
Query: 239 LFGKQIPATC 248
L GKQ P C
Sbjct: 368 LKGKQNPPVC 377
>gi|359485803|ref|XP_002273500.2| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase [Vitis vinifera]
Length = 387
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/231 (45%), Positives = 131/231 (56%), Gaps = 53/231 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNFL +S I I S DS+ FHIN+LGC N+ + ITA DS NT+GIHIG S G
Sbjct: 146 INLRFNFLTNSIIKDITSKDSKQFHINVLGCRNITFFQVAITAPEDSQNTDGIHIGRSRG 205
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+HS I TGDDCVS+ GHGISVGSLG N+ V+G+ V+NCT
Sbjct: 206 VNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGISVGSLGLYKNEAPVIGIRVKNCT 265
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
+ T +IV NNV NPI+IDQ YCP+N+CN++VPSQVK
Sbjct: 266 LSDTTNGVRVKTWPSSPQGTATEMHFHDIVMNNVSNPIIIDQEYCPHNQCNLQVPSQVKI 325
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPE 227
S+V F I G SA + +PCQ + I +IN Y G EGPE
Sbjct: 326 SDVSFQGICGMSAMQVAVKLVXSRGVPCQTVDISDINLTYKG----KEGPE 372
Score = 40.8 bits (94), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
F+V +GA ADG D S+A TAW AC I S V++P G Y
Sbjct: 26 FDVTKYGAQADGKTDISQALLTAWEAACA-SPIASRVVIPAGIY 68
>gi|359494421|ref|XP_003634775.1| PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Vitis
vinifera]
Length = 246
Score = 179 bits (455), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 107/253 (42%), Positives = 143/253 (56%), Gaps = 62/253 (24%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+RFNF+ ++ + I S DS+ FHIN+LGC NL ++ I+A DS NT+GIHIG S+G +
Sbjct: 5 LRFNFITNNMVKDITSRDSKQFHINLLGCGNLTFYNVAISAPKDSLNTDGIHIGRSSGID 64
Query: 108 ISHSVIATGDDCVS----------------LGHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+ S I TGDDCVS LGHGI VGSLGK N+E +VG++V+NCTF
Sbjct: 65 ITDSAIETGDDCVSIGDGSGQINIQRITCGLGHGICVGSLGKYPNEEPMVGISVKNCTFI 124
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T +IV NNV NPI+IDQ YCP+N+CN+K S++K SN
Sbjct: 125 NTQNGVRVKTWSASHQDTTSEMHLEDIVMNNVGNPIIIDQKYCPHNQCNLKRLSRIKLSN 184
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPE--TTSLCSNVK 236
V F NI+GT++ + +PCQ+ +G+ N G E S C N+K
Sbjct: 185 VSFRNIQGTTSTQVPVKLVCSQGVPCQDFELGDNN-----------GNEGLAMSQCKNIK 233
Query: 237 PTLFGKQIPATCV 249
P L KQ+P TC
Sbjct: 234 PNLLDKQLPRTCA 246
>gi|449506887|ref|XP_004162875.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Cucumis
sativus]
Length = 397
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 142/254 (55%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++F+F+ +S + I S+DS+ FHIN+LGC N+ + I+A +SPNT+GIHI SS
Sbjct: 138 MNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQ 197
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I S I+TGDDCVS+ GHGISVGSLGK +++VVG+TV+ C
Sbjct: 198 INILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKTCK 257
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I NV NP++IDQ YCP+N+CN KVPS++K
Sbjct: 258 LINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKVPSKIK 317
Query: 186 TSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NIRGTSA IPC+ + + +IN Y+G + GP S C+NV
Sbjct: 318 ISKVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSG----IRGP-ILSECANV 372
Query: 236 KPTLFGKQIPATCV 249
+P + GKQ P C
Sbjct: 373 QPLITGKQSPQICA 386
>gi|6714528|dbj|BAA89478.1| polygalacturonase [Salix gilgiana]
Length = 393
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/275 (40%), Positives = 153/275 (55%), Gaps = 61/275 (22%)
Query: 24 AW-REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
AW + CN D K+ +P ++IRF+F+ + + I + DS+ FH+N+LGC NL
Sbjct: 130 AWSKSTCNKD--KNCEGLP----MNIRFDFITNGLVRDITTRDSKNFHVNVLGCKNLTFQ 183
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGI 126
+TA +S NT+GIHIG S G I S I TGDDC+S+ GHGI
Sbjct: 184 HFTMTAPGESINTDGIHIGQSTGIYIIDSNIGTGDDCISVGDGTEELHVTGVTCGPGHGI 243
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENP 163
SVGSLG+ N++ V G+ V+NCT + T +IV NNV+NP
Sbjct: 244 SVGSLGRYPNEKPVSGIFVKNCTISNTANGVRIKSWPDLYGGAASNMHFEDIVMNNVQNP 303
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNIN 213
+V+DQ YCP+N+C++K PS+VK S+V F NIRGTSA IPC+ + + +IN
Sbjct: 304 VVVDQEYCPWNQCSLKSPSKVKISDVSFKNIRGTSATPVVVKLACSGGIPCEKVELADIN 363
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
VY+G EGP S CSNVKPT+ G + C
Sbjct: 364 LVYSG----SEGP-AKSQCSNVKPTISGIMSASGC 393
>gi|449470744|ref|XP_004153076.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449531311|ref|XP_004172630.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 397
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 142/254 (55%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++F+F+ +S + I S+DS+ FHIN+LGC N+ + I+A +SPNT+GIHI SS
Sbjct: 138 MNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSEQ 197
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I S I+TGDDCVS+ GHGISVGSLGK +++VVG+TV+ C
Sbjct: 198 INILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKACK 257
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I NV NP++IDQ YCP+N+CN KVPS++K
Sbjct: 258 LINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKVPSKIK 317
Query: 186 TSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NIRGTSA IPC+ + + +IN Y+G + GP S C+NV
Sbjct: 318 ISKVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSG----IRGP-ILSECANV 372
Query: 236 KPTLFGKQIPATCV 249
+P + GKQ P C
Sbjct: 373 QPLITGKQSPQICA 386
>gi|357450759|ref|XP_003595656.1| Polygalactorunase PG11 [Medicago truncatula]
gi|355484704|gb|AES65907.1| Polygalactorunase PG11 [Medicago truncatula]
Length = 407
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/272 (39%), Positives = 149/272 (54%), Gaps = 64/272 (23%)
Query: 23 TAWREA---CNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 79
TA+++A W G KS V + +++ F F+N+S +TG+ S DS+ FH+ +LGC N
Sbjct: 126 TAYKQAQPAAAWSGKKSNVKI----LMNLGFMFVNNSMVTGVTSKDSKNFHVMVLGCNNF 181
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------G 123
+ +TA +DSPNT+GIH+G S +I ++ I TGDDCVSL G
Sbjct: 182 TFDGFTVTAPSDSPNTDGIHMGRSTDVKILNTNIGTGDDCVSLGDGSRKITVQGVKCGPG 241
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNN 159
HGISVGSLG+ ++ V G+TV+NCT T T +I NN
Sbjct: 242 HGISVGSLGRYTTEDNVEGVTVKNCTLTATQNGVRIKTWPDAPGTITVSDIHFEDITMNN 301
Query: 160 VENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGI 209
V NPI+IDQ YCP+N CN KVPS+VK S + F NI+GTS ++ +PC + +
Sbjct: 302 VTNPIIIDQEYCPWNACNKKVPSKVKLSKISFKNIQGTSGAPEGVVLVCSSAVPCDGVEL 361
Query: 210 GNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
N V+VK G + CSNVKPT+ G
Sbjct: 362 -------NNVDVKFNGKPAIAKCSNVKPTVTG 386
>gi|129941|sp|P24548.1|PGLR_OENOR RecName: Full=Exopolygalacturonase; Short=ExoPG; AltName:
Full=Galacturan 1,4-alpha-galacturonidase; AltName:
Full=Pectinase
gi|256552|gb|AAB23476.1| polygalacturonase homolog {clone P22} [Oenothera organensis,
pollen, Peptide, 362 aa]
Length = 362
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 141/252 (55%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++R + +S + + ++DS+ FH+N++GC NL KI+A S NT+GIHIG S+G
Sbjct: 108 MNLRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDG 167
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ I TGDDC+SL GHGISVGSLG+ N+E VVG+ V+NCT
Sbjct: 168 VNIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCT 227
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
TG+ +I N+V PI+IDQ YCPYN+C +VPS VK
Sbjct: 228 ITGSQNGVRIKTWPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKL 287
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S + F NI+GTS K PC + + +I+ Y+G +G TS+C N+K
Sbjct: 288 SKISFKNIKGTSTTKEAVKLVCSKSFPCNGVELADIDLTYSG-----KGGPATSVCENIK 342
Query: 237 PTLFGKQIPATC 248
PT+ GKQIPA C
Sbjct: 343 PTIKGKQIPAIC 354
>gi|449526299|ref|XP_004170151.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 404
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/253 (42%), Positives = 141/253 (55%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RF+F+ +S + I S+DS+ FH+NILGC NL + I A +SPNT+GIHIG S G
Sbjct: 148 ISLRFDFITNSIVRRITSLDSKNFHVNILGCNNLTFQGVNIIAPENSPNTDGIHIGRSIG 207
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I S IATGDDC+SL GHGIS+GSLGK N+E V G+ V NCT
Sbjct: 208 ISILKSRIATGDDCISLGDGSKRIKVNNVICGPGHGISIGSLGKYNNEEPVEGVIVNNCT 267
Query: 150 FTGTN---------------IVTN---------NVENPIVIDQLYCPYNKCNIKVPSQVK 185
T I TN NV NPI+IDQ YCP+N+CN ++PS +K
Sbjct: 268 IINTTNGVRIKTWPASPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCNREIPSNIK 327
Query: 186 TSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+ V F NIRG+SA + +PC+ + + NI+ VYNG+ + TS C NV
Sbjct: 328 INKVSFKNIRGSSATPVAVKLICSSNLPCEEVKVANIDLVYNGIKGSI-----TSECMNV 382
Query: 236 KPTLFGKQIPATC 248
KP + G Q P C
Sbjct: 383 KPIISGIQNPPIC 395
>gi|449534450|ref|XP_004174175.1| PREDICTED: exopolygalacturonase-like, partial [Cucumis sativus]
Length = 261
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/254 (40%), Positives = 142/254 (55%), Gaps = 55/254 (21%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+ +++F+F+ +S + I S+DS+ FHIN+LGC N+ + I+A +SPNT+GIHI SS
Sbjct: 1 HQNLKFSFITNSIVKDITSLDSKNFHINLLGCKNVTFQHVTISAPENSPNTDGIHISSSE 60
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
I S I+TGDDCVS+ GHGISVGSLGK +++VVG+TV+ C
Sbjct: 61 QINILDSKISTGDDCVSVGDSNKQVTITNVTCGPGHGISVGSLGKYTKEKDVVGVTVKAC 120
Query: 149 TFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
T +I NV NP++IDQ YCP+N+CN KVPS++
Sbjct: 121 KLINTTNGVRIKTWPDSAGAFIASDMHFEDIEMQNVSNPVIIDQEYCPWNQCNRKVPSKI 180
Query: 185 KTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
K S V F NIRGTSA IPC+ + + +IN Y+G + GP S C+N
Sbjct: 181 KISKVSFKNIRGTSATPIAVKLVCSKSIPCEGVEVADINLTYSG----IRGP-ILSECAN 235
Query: 235 VKPTLFGKQIPATC 248
V+P + GKQ P C
Sbjct: 236 VQPLITGKQSPQIC 249
>gi|7435385|pir||S46529 polygalacturonase (EC 3.2.1.15) precursor (clone pC27.W) - common
tobacco (fragment)
gi|1345547|emb|CAA50337.1| polygalacturonase [Nicotiana tabacum]
Length = 385
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 141/250 (56%), Gaps = 54/250 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ FN L +STI I ++DS+ FH+N+ C NL ++A A+SPNT+GIH+ S+
Sbjct: 133 LSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVN 192
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+ S +TGDDC+S+ GHGISVGSLG +++ VVG+ VRNCTFT
Sbjct: 193 ITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFT 252
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T +I+ NV NP+VIDQ+YCP+NKCN +PSQVK S
Sbjct: 253 NTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISK 312
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F NI+GTS + +PC+ I +G+I+ Y+G EGP +S C N+KP+
Sbjct: 313 VSFQNIKGTSRTQDAVSLLCSKGVPCEGIEVGDIDITYSG----KEGPAKSS-CENIKPS 367
Query: 239 LFGKQIPATC 248
L KQ P C
Sbjct: 368 LKDKQNPPVC 377
>gi|297833576|ref|XP_002884670.1| exopolygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297330510|gb|EFH60929.1| exopolygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 449
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L D+ I A +S NT+GIHIG SNG
Sbjct: 195 INIRFTGLTNSKIKSITSTNSKLFHMNILNCKNITLEDIGIDAPPESLNTDGIHIGRSNG 254
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 255 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 314
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPS+VK
Sbjct: 315 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSTPVLIDQEYCPYGHCKAGVPSKVKL 374
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V NI+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 375 SDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSACSNIK 429
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 430 PILSGKLVPAAC 441
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+VK GA DG DDS AF AW+EAC S + VP G+YL F
Sbjct: 75 LDVKASGAKGDGKTDDSAAFMAAWKEAC---AAGSTITVPKGEYLVESLEF 122
>gi|297789264|ref|XP_002862616.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297308250|gb|EFH38874.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 445
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L D+ I A +S NT+GIHIG SNG
Sbjct: 191 INIRFTGLTNSKIKSITSTNSKLFHMNILNCKNITLEDIGIDAPPESLNTDGIHIGRSNG 250
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 251 VNLLGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 310
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPS+VK
Sbjct: 311 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSTPVLIDQEYCPYGHCKAGVPSKVKL 370
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V NI+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 371 SDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALADINLVHNG----KEGP-AVSACSNIK 425
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 426 PILSGKLVPAAC 437
>gi|297834246|ref|XP_002885005.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
gi|297330845|gb|EFH61264.1| polygalacturonase [Arabidopsis lyrata subsp. lyrata]
Length = 449
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L D+ I A +S NT+GIHIG SNG
Sbjct: 195 INIRFTGLTNSKIKSITSTNSKLFHMNILNCKNITLEDIGIDAPPESLNTDGIHIGRSNG 254
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 255 VNLLGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 314
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPS+VK
Sbjct: 315 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSTPVLIDQEYCPYGHCKAGVPSKVKL 374
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V NI+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 375 SDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALADINLVHNG----KEGP-AVSACSNIK 429
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 430 PILSGKLVPAAC 441
>gi|224096864|ref|XP_002310765.1| predicted protein [Populus trichocarpa]
gi|222853668|gb|EEE91215.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/258 (41%), Positives = 138/258 (53%), Gaps = 57/258 (22%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+PP +S++FNF+ + + I S DS+YFH ++LGC NL ITAH +S NT+GIH
Sbjct: 142 LPP---VSLKFNFITNGIVHDITSTDSKYFHAHLLGCKNLTFQHFTITAHDESLNTDGIH 198
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
IG S +I S I TGDDC+SL GHGIS+GSLGK N+E V G+
Sbjct: 199 IGRSKDIKIIDSDIGTGDDCISLGHGSRQITIEGVTCAPGHGISIGSLGKSQNEESVSGI 258
Query: 144 TVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKV 180
V+NCT + T +I+ NV NPIVIDQ+YCP+N+CN K
Sbjct: 259 FVKNCTISNTQNGVRIKSWPALFGGSASDIHFEDIIMKNVSNPIVIDQVYCPWNECNRKS 318
Query: 181 PSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTS 230
S+V NV F NIRGTS + IPC + + +I+ Y G EGP
Sbjct: 319 ASKVSIKNVSFKNIRGTSRTPVAVQLSCSKDIPCDEVEVADIDLKYTG----SEGPAKFQ 374
Query: 231 LCSNVKPTLFGKQIPATC 248
CSNV+P GK P+ C
Sbjct: 375 -CSNVQPKFHGKINPSKC 391
>gi|356567688|ref|XP_003552049.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 389
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/247 (41%), Positives = 138/247 (55%), Gaps = 57/247 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ FNFLN+S + I S DS+ FH+N+LGC N + K++A DSPNT+GIHIG S
Sbjct: 144 MNFGFNFLNNSIVRDITSKDSKNFHVNVLGCNNFTFDGFKVSAPKDSPNTDGIHIGRSTD 203
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ IATGDDCVSL GHGISVGSLGK +E V GL V+NCT
Sbjct: 204 VKILNTNIATGDDCVSLGDGCKNITVQNVNCGPGHGISVGSLGKYDAEEPVAGLLVKNCT 263
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
GT ++ NNV NPI+IDQ YCP+N+C+ + PS++K
Sbjct: 264 LNGTDNGVRIKTWPNTPGAITITDMHFEDLTMNNVMNPIIIDQEYCPWNQCSKQNPSKIK 323
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NI+GTS K +PC+ + + +I+ +N G T+ C+NV
Sbjct: 324 ISKVSFKNIKGTSGTKEGVVLVCSSGVPCEAVEMADIDLTFN-------GSAATAKCANV 376
Query: 236 KPTLFGK 242
KPT+ GK
Sbjct: 377 KPTITGK 383
>gi|356508462|ref|XP_003522976.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 389
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 139/247 (56%), Gaps = 57/247 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ FNFLN+S + I S DS+ FH+N+LGC N + K++A DSPNT+GIHIG S
Sbjct: 144 MNFGFNFLNNSIVRDITSKDSKNFHVNVLGCNNFTFDGFKVSAPKDSPNTDGIHIGRSTD 203
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ IATGDDCVSL GHGISVGSLGK ++E V G V+NCT
Sbjct: 204 VKILNTNIATGDDCVSLGDGCKNITVQNVNCGPGHGISVGSLGKYDSEEPVAGFLVKNCT 263
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
GT ++ NNV NPI+IDQ YCP+N+C+ + PS++K
Sbjct: 264 LNGTDNGVRIKTWPNTPGAITITDMHFEDLTMNNVTNPIIIDQEYCPWNQCSKQNPSKIK 323
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NI+GTS ++ +PC+ + + +I+ +NG T+ C+NV
Sbjct: 324 ISKVSFKNIKGTSGSQEGVVLVCSSGVPCEGVEMADIDLTFNGA-------AATAKCANV 376
Query: 236 KPTLFGK 242
KPT+ GK
Sbjct: 377 KPTITGK 383
>gi|356508464|ref|XP_003522977.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 389
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 139/247 (56%), Gaps = 57/247 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ FNFLN+S + I S DS+ FH+N+LGC N + K++A DSPNT+GIHIG S
Sbjct: 144 MNFGFNFLNNSIVRDITSKDSKNFHVNVLGCNNFTFDGFKVSAPKDSPNTDGIHIGRSTD 203
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ IATGDDCVSL GHGISVGSLGK ++E V G V+NCT
Sbjct: 204 VKILNTNIATGDDCVSLGDGCKNITVQNVNCGPGHGISVGSLGKYDSEEPVAGFLVKNCT 263
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
GT ++ NNV NPI+IDQ YCP+N+C+ + PS++K
Sbjct: 264 LNGTDNGVRIKTWPNTPGAITITDMHFEDLTMNNVTNPIIIDQEYCPWNQCSKQNPSKIK 323
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NI+GTS ++ +PC+ + + +I+ +NG T+ C+NV
Sbjct: 324 ISKVSFKNIKGTSGSQEGVVLVCSSGVPCEGVEMADIDLTFNGA-------AATAKCANV 376
Query: 236 KPTLFGK 242
KPT+ GK
Sbjct: 377 KPTITGK 383
>gi|388494936|gb|AFK35534.1| unknown [Medicago truncatula]
Length = 407
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/272 (39%), Positives = 148/272 (54%), Gaps = 64/272 (23%)
Query: 23 TAWREA---CNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 79
TA+++A W G KS V + +++ F F+N+S +TG+ S DS+ FH+ +LGC N
Sbjct: 126 TAYKQAQPAAAWSGKKSNVKI----LMNLGFMFVNNSMVTGVTSKDSKNFHVMVLGCNNF 181
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------G 123
+ +TA +DSPNT+GIH+G S +I ++ I TGDDCVSL G
Sbjct: 182 TFDGFTVTAPSDSPNTDGIHMGRSTDVKILNTNIGTGDDCVSLGDGSRKITVQGVKCGPG 241
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNN 159
HGISVGSLG+ ++ V G+TV++CT T T +I NN
Sbjct: 242 HGISVGSLGRYTTEDNVEGVTVKSCTLTATQNGVRIKTWPDAPGTITVSDIHFEDITMNN 301
Query: 160 VENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGI 209
V NPI+IDQ YCP+N CN KVPS+VK S F NI+GTS ++ +PC + +
Sbjct: 302 VTNPIIIDQEYCPWNACNKKVPSKVKLSKTSFKNIQGTSGAPEGVVLVCSSTVPCDGVEL 361
Query: 210 GNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
N V+VK G + CSNVKPT+ G
Sbjct: 362 -------NNVDVKFNGKPAIAKCSNVKPTVTG 386
>gi|225447627|ref|XP_002274096.1| PREDICTED: polygalacturonase [Vitis vinifera]
gi|296084974|emb|CBI28389.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 142/252 (56%), Gaps = 56/252 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++FNFL +S + + + DS+ FH+N+LGC NL ++A +S NT+GIHIG S+G
Sbjct: 147 INLKFNFLTNSMVRDVTTKDSKQFHVNVLGCKNLSFYHFTVSAPEESLNTDGIHIGRSSG 206
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+++ I TGDDC+S+ GHGISVGSLGK N+ VVG+ V T
Sbjct: 207 INITNTNIKTGDDCISIGDGSEQITIDQVTCGPGHGISVGSLGKYANEAPVVGIKVTGST 266
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T T +I+ NNV NPI+IDQ YCPY++C ++PS+VK
Sbjct: 267 LTNTQNGIRVKTWPASPAGIASNMHFEDIIMNNVGNPILIDQEYCPYSQCKQQIPSRVKI 326
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V F NIRGTS+ + +PCQN+ + +IN +N G TS+C NVK
Sbjct: 327 SDVTFKNIRGTSSTELAVKLVCSSGVPCQNVQLTDINLKFN-------GGAPTSICKNVK 379
Query: 237 PTLFGKQIPATC 248
P L G Q P +C
Sbjct: 380 PILGGVQQPRSC 391
>gi|311962|emb|CAA51692.1| exopolygalacturonase [Arabidopsis thaliana]
Length = 445
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L D+ I A +S NT+GIHIG SNG
Sbjct: 191 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDISIDAPPESLNTDGIHIGRSNG 250
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 251 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 310
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPS+VK
Sbjct: 311 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKL 370
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V NI+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 371 SDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSACSNIK 425
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 426 PILSGKLVPAAC 437
>gi|224127778|ref|XP_002329175.1| predicted protein [Populus trichocarpa]
gi|222870956|gb|EEF08087.1| predicted protein [Populus trichocarpa]
Length = 393
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/255 (39%), Positives = 140/255 (54%), Gaps = 54/255 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G +++RF+F+ ++ + I ++DS+ FH+N+LGC NL + A +S NT+GIHIG
Sbjct: 144 GLPMNLRFDFITNALVRDITTLDSKNFHVNVLGCKNLTFQHFTVRAPGESVNTDGIHIGR 203
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S G I S I+TGDDC+S+ GHGISVGSLGK N++ V G+ V+
Sbjct: 204 STGIYIIDSKISTGDDCISVGDGTEELHITGVTCGPGHGISVGSLGKYPNEKPVSGIFVK 263
Query: 147 NCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ 183
NCT + T +IV NNV+NP++IDQ YCP+N+C +K PS+
Sbjct: 264 NCTISDTTNGVRIKSWPALYGGVASNMHFEDIVMNNVQNPVIIDQGYCPWNQCTLKAPSK 323
Query: 184 VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
VK S+V F +IRGTSA + PCQ + + NIN Y G G S CS
Sbjct: 324 VKISDVSFKSIRGTSATPVVVRIACSSGFPCQKVKLANINLAYRG-----PGGPAKSQCS 378
Query: 234 NVKPTLFGKQIPATC 248
NVKP + G + C
Sbjct: 379 NVKPIISGIMSASGC 393
>gi|15231880|ref|NP_187442.1| galacturan 1,4-alpha-galacturonidase [Arabidopsis thaliana]
gi|27735237|sp|P49063.2|PGLR2_ARATH RecName: Full=Exopolygalacturonase clone GBGA483; Short=ExoPG;
AltName: Full=Galacturan 1,4-alpha-galacturonidase;
AltName: Full=Pectinase; Flags: Precursor
gi|6648197|gb|AAF21195.1|AC013483_19 exopolygalacturonase [Arabidopsis thaliana]
gi|15810269|gb|AAL07022.1| putative exopolygalacturonase [Arabidopsis thaliana]
gi|20259593|gb|AAM14139.1| putative exopolygalacturonase [Arabidopsis thaliana]
gi|332641090|gb|AEE74611.1| galacturan 1,4-alpha-galacturonidase [Arabidopsis thaliana]
Length = 444
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L+D+ I A +S NT+GIHIG SNG
Sbjct: 190 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNG 249
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 250 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 309
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPSQVK
Sbjct: 310 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKL 369
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V I+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 370 SDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSACSNIK 424
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 425 PILSGKLVPAAC 436
>gi|3004442|emb|CAA11160.1| polygalacturonase [Arabidopsis thaliana]
Length = 445
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L D+ I A +S NT+GIHIG SNG
Sbjct: 191 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNG 250
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 251 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 310
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPS+VK
Sbjct: 311 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKL 370
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V NI+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 371 SDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSACSNIK 425
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 426 PILSGKLVPAAC 437
>gi|17064742|gb|AAL32525.1| polygalacturonase; pectinase [Arabidopsis thaliana]
gi|21387101|gb|AAM47954.1| polygalacturonase; pectinase [Arabidopsis thaliana]
Length = 445
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L D+ I A +S NT+GIHIG SNG
Sbjct: 191 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNG 250
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 251 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 310
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPS+VK
Sbjct: 311 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKL 370
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V NI+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 371 SDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSACSNIK 425
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 426 PILSGKLVPAAC 437
>gi|313684|emb|CAA51033.1| exopolygalacturonase [Arabidopsis thaliana]
Length = 444
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L+D+ I A +S NT+GIHIG SNG
Sbjct: 190 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNG 249
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 250 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 309
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPSQVK
Sbjct: 310 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKL 369
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V I+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 370 SDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSACSNIK 424
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 425 PILSGKLVPAAC 436
>gi|15231771|ref|NP_188020.1| exopolygalacturonase / galacturan 1,4-alpha-galacturonidase /
pectinase [Arabidopsis thaliana]
gi|11994377|dbj|BAB02336.1| polygalacturonase; pectinase [Arabidopsis thaliana]
gi|332641937|gb|AEE75458.1| exopolygalacturonase / galacturan 1,4-alpha-galacturonidase /
pectinase [Arabidopsis thaliana]
Length = 445
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L D+ I A +S NT+GIHIG SNG
Sbjct: 191 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNG 250
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 251 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 310
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPS+VK
Sbjct: 311 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKL 370
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V NI+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 371 SDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSACSNIK 425
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 426 PILSGKLVPAAC 437
>gi|6714530|dbj|BAA89479.1| polygalacturonase [Salix gilgiana]
Length = 393
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/255 (40%), Positives = 142/255 (55%), Gaps = 54/255 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++IRF+F+ + + I + DS+ FH+N+L C NL +TA A+S NT+GIHIG
Sbjct: 144 GFPMNIRFDFITNGFVRDITTRDSKNFHVNVLECKNLTFQHFTVTAPAESINTDGIHIGR 203
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S G I S I TGDDC+S+ GHGISVGSLG+ N++ V G+ V+
Sbjct: 204 STGIYIIDSKIGTGDDCISVGDGTEDLHVTGVTCGPGHGISVGSLGRYPNEKPVSGIFVK 263
Query: 147 NCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ 183
NCT + T +IV NNV+NP+ +DQ YCP+N+C++K PS+
Sbjct: 264 NCTISNTANGVRIKSWPDLYGGDASNMHFEDIVMNNVQNPVAVDQEYCPWNQCSLKAPSK 323
Query: 184 VKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
VK S+V F NIRGTSA IPC+ + + +IN VY+G EGP S CS
Sbjct: 324 VKISDVSFKNIRGTSATPVVVKLACSSGIPCEKVELADINLVYSG----SEGP-AKSQCS 378
Query: 234 NVKPTLFGKQIPATC 248
NVKP + G + C
Sbjct: 379 NVKPIISGIMSASGC 393
>gi|3024386|sp|Q39786.1|PGLR_GOSHI RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|606650|gb|AAA82167.1| polygalacturonase [Gossypium hirsutum]
Length = 407
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 151/298 (50%), Gaps = 66/298 (22%)
Query: 2 FNVKDFGAVADGIKDD--SKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTIT 59
++V++F GI D S A+E + C +S + V +IRF+FL ++ I
Sbjct: 113 YSVENFKMFGGGIFDGQGSIAYE---KNTCENREFRSKLPV------NIRFDFLTNALIQ 163
Query: 60 GIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDC 119
I S DS+ FHIN+ C N+ L LKI A +SPNT+GIH+G S G I S I TGDDC
Sbjct: 164 DITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDC 223
Query: 120 VSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---------- 153
+S+ GHGIS+GSLGK N+E V G+ + NCT T T
Sbjct: 224 ISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWP 283
Query: 154 -------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA- 199
+I NNV +PI+IDQ YCP+NKC S+VK SN+ F NIRGTSA
Sbjct: 284 GEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSAL 343
Query: 200 ---------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
PCQN+ + +I+ +NG TS C NVKP GK P C
Sbjct: 344 PEAIKFICSGSSPCQNVELADIDIKHNGAE------PATSQCLNVKPITSGKLNPIPC 395
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
V FGA ADG D SK F AW+EAC S V++P G YL + N
Sbjct: 32 VAKFGAKADGKTDLSKPFLDAWKEACA-SVTPSTVVIPKGTYLLSKVNL 79
>gi|1345546|emb|CAA50335.1| polygalacturonase [Nicotiana tabacum]
Length = 385
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/250 (40%), Positives = 140/250 (56%), Gaps = 54/250 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ FN L +ST+ I ++DS+ FH+N+ C NL ++A A+SPNT+GIH+ S+
Sbjct: 133 LSFNSLTNSTVKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVN 192
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+ S +TGDDC+S+ GHGISVGSLG +++ VVG+ V NCT T
Sbjct: 193 ITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVSNCTVT 252
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T +I+ NV NP+VIDQ+YCP+NKCN +PSQVK S
Sbjct: 253 NTDNGVRIKTWPASHPGVVNDVRFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISK 312
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F NI+GTS + +PC+ I +G+I+ Y+G EGP +S C N+KP+
Sbjct: 313 VSFQNIKGTSRTQDAVSLLCSKGVPCEGIEVGDIDITYSG----KEGPAKSS-CENIKPS 367
Query: 239 LFGKQIPATC 248
L GKQ P C
Sbjct: 368 LKGKQNPPVC 377
>gi|3024385|sp|Q39766.1|PGLR_GOSBA RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|606652|gb|AAA58322.1| polygalacturonase [Gossypium barbadense]
Length = 407
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 151/298 (50%), Gaps = 66/298 (22%)
Query: 2 FNVKDFGAVADGIKDD--SKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTIT 59
++V++F GI D S A+E + C +S + V +IRF+F+ ++ I
Sbjct: 113 YSVENFKMFGGGIFDGQGSIAYE---KNTCENREFRSKLPV------NIRFDFVTNALIQ 163
Query: 60 GIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDC 119
I S DS+ FHIN+ C N+ L LKI A +SPNT+GIH+G S G I S I TGDDC
Sbjct: 164 DITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDC 223
Query: 120 VSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---------- 153
+S+ GHGIS+GSLGK N+E V G+ + NCT T T
Sbjct: 224 ISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWP 283
Query: 154 -------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA- 199
+I NNV +PI+IDQ YCP+NKC S+VK SN+ F NIRGTSA
Sbjct: 284 GEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSAL 343
Query: 200 ---------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
PCQN+ + +I+ +NG TS C NVKP GK P C
Sbjct: 344 PEAIKFICSGSSPCQNVELADIDIQHNGAE------PATSQCLNVKPITIGKLNPIPC 395
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
V FGA ADG D SK F AW+EAC S V++P G YL + N
Sbjct: 32 VAKFGAKADGKTDLSKPFLDAWKEACA-SVTPSTVVIPKGTYLLSKVNL 79
>gi|288551966|gb|ADC53480.1| polygalacturonase [Gossypium hirsutum]
Length = 412
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 138/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF+FL ++ I I + DS+ F N+LGC N+ ++A +SPNT+GIHIG S+G
Sbjct: 154 INLRFDFLTNAMIQDITTKDSKQFQANVLGCKNITFEHFTVSAPDESPNTDGIHIGRSDG 213
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ +S I TGDDCVS+ GHGIS+GSLG N+E V G+TV+NCT
Sbjct: 214 VNVLNSEIKTGDDCVSIGDGSKNLVINGVTCGPGHGISIGSLGLFKNEEPVDGVTVKNCT 273
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T T +I NV +PI+IDQ YCP+NKC I S+VK
Sbjct: 274 MTNTSNGVRIKTWPGAEPGTCSNIHFEDITVTNVSSPIIIDQKYCPWNKCKINEESKVKL 333
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SN+ F NI GTSA +PC+N+ + +I ++G GP S CSNVK
Sbjct: 334 SNISFKNIHGTSARPEAVKIICSATLPCENVELADIEITHSGPT----GP-AVSQCSNVK 388
Query: 237 PTLFGKQIPATC 248
P + GKQ PA C
Sbjct: 389 PKVSGKQNPAAC 400
>gi|449506924|ref|XP_004162885.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Cucumis
sativus]
Length = 402
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 104/253 (41%), Positives = 135/253 (53%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RFNF+ + + I S+DS+ H+NILGC NL + I A DSPNT+ IHIG S
Sbjct: 146 ISLRFNFITNXIVRRITSLDSKNSHVNILGCNNLTFQGVNIIAPEDSPNTDEIHIGRSIR 205
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I S IA GDDC+SL GHGIS+GSLGK N+E V G+ V+NCT
Sbjct: 206 ISILKSRIAIGDDCISLGNGSKRVKVTDVTCGPGHGISIGSLGKYTNEEPVEGVVVKNCT 265
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I NV NPI+IDQ YCP+N+CN ++PS++K
Sbjct: 266 IMNTTNGVRIKTWSASPVAGIAIIMHFSDITMINVSNPILIDQEYCPWNQCNRQIPSKIK 325
Query: 186 TSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+ V F NIRG SA + PC+ + + NI+ VYNG + TS C NV
Sbjct: 326 INKVSFKNIRGCSATSVAVKLICSSNLPCEEVKVANIDLVYNGTKGSI-----TSQCMNV 380
Query: 236 KPTLFGKQIPATC 248
KP L G Q P+ C
Sbjct: 381 KPILSGIQNPSIC 393
>gi|356508460|ref|XP_003522975.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 389
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/247 (40%), Positives = 138/247 (55%), Gaps = 57/247 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ FNFLN+S + I S DS+ FH+N+LGC N + K++A DSPNT+GIHIG S
Sbjct: 144 MNFGFNFLNNSIVRDITSKDSKNFHVNVLGCNNFTFDGFKVSAPKDSPNTDGIHIGRSTD 203
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ IATGDDCVSL GHGISVGSLGK ++E V G V+NCT
Sbjct: 204 VKILNTNIATGDDCVSLGDGSKNITVQNVNCGPGHGISVGSLGKYDSEEPVAGFLVKNCT 263
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T ++ NNV NPI+IDQ YCP+N+C+ + PS++K
Sbjct: 264 LNETDNGVRIKTWPNTPGAITITDMHFEDLTMNNVTNPIIIDQEYCPWNQCSKQNPSKIK 323
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NI+GTS ++ +PC+ + + +I+ +NG T+ C+NV
Sbjct: 324 ISKVSFKNIKGTSGSQDGVVLVCSSGVPCEGVEMADIDLTFNGA-------AATAKCANV 376
Query: 236 KPTLFGK 242
KPT+ GK
Sbjct: 377 KPTITGK 383
>gi|222424823|dbj|BAH20364.1| AT3G14040 [Arabidopsis thaliana]
Length = 289
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L D+ I A +S NT+GIHIG SNG
Sbjct: 35 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLTDIGIDAPPESLNTDGIHIGRSNG 94
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 95 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 154
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPS+VK
Sbjct: 155 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSKVKL 214
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V NI+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 215 SDVTIKNIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSACSNIK 269
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 270 PILSGKLVPAAC 281
>gi|548490|sp|P35337.1|PGLR_BRANA RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|304223|gb|AAA70402.1| polygalacturonase [Brassica napus]
Length = 397
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 144/254 (56%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RF+F++++ I + S+D++ FH N++ N+ +++KI A A+SPNT+GIH+G G
Sbjct: 139 ISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ IATGDDC+S+ GHGISVGSLG+ +++V +TV+NCT
Sbjct: 199 VKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
GT +I+ N V NPI+IDQ YCP+N+CN PS +K
Sbjct: 259 LEGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
++ F NIRGTS NK PC+N+ IG+IN Y G +GP T C+NV
Sbjct: 319 LVDITFRNIRGTSENKDAVKLLCSKGHPCENVEIGDINIEYTG----PDGPPTFE-CTNV 373
Query: 236 KPTLFGKQIPATCV 249
P L G Q P CV
Sbjct: 374 TPKLVGAQNPKACV 387
>gi|356516886|ref|XP_003527123.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 389
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 138/247 (55%), Gaps = 57/247 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ FNFLN+S + + S DS+ FH+N+LGC N+ + KI+A A+SPNT+GIHIG S
Sbjct: 144 MNFGFNFLNNSIVRDLTSKDSKNFHVNVLGCNNMTFDGFKISAPAESPNTDGIHIGRSTD 203
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
++ ++ IATGDDC+SL GHGISVGSLG+ N+E V GL V+NCT
Sbjct: 204 VKVLNTNIATGDDCISLGDGNKNITVQNVNCGPGHGISVGSLGRYDNEEAVEGLLVKNCT 263
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I NV NP++IDQ YCP+N+C+ K PS++K
Sbjct: 264 LNNTDNGLRIKTWPSTPLTITVTDMHFEDITMENVSNPVIIDQEYCPWNQCSKKNPSKIK 323
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NI+GTS K PC+ + + +++ +NG TT+ C+NV
Sbjct: 324 ISKVSFKNIKGTSGTKEGVIFICSSVAPCEGVEMTDVDLTFNGA-------ATTAKCANV 376
Query: 236 KPTLFGK 242
KP + GK
Sbjct: 377 KPVITGK 383
>gi|359474790|ref|XP_002279959.2| PREDICTED: exopolygalacturonase-like [Vitis vinifera]
Length = 424
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 139/252 (55%), Gaps = 55/252 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
++F +N + + GI SV+S++FHI ++ C N K + +KI+A +SPNT+GIHI S+G
Sbjct: 178 LKFIAMNKTVVRGITSVNSKFFHIALVECNNFKGSQIKISAPENSPNTDGIHIERSSGVY 237
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
S S+I TGDDC+S+ GHGISVGSLGK N+E+V GL V++CT T
Sbjct: 238 FSRSLIGTGDDCISVGQGNSQVTITSITCGPGHGISVGSLGKYPNEEDVSGLVVKDCTMT 297
Query: 152 GT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
GT NIV NNV NPI+IDQ YCP+ C K PS+VK S
Sbjct: 298 GTTNGIRIKTWANSPDSSEATNMTFENIVMNNVTNPIIIDQAYCPFMSCASKAPSRVKLS 357
Query: 188 NVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
++ F NIRGTS + + PCQNI + +++ +++ TS C NV+
Sbjct: 358 DIYFKNIRGTSLSAVAVTLKCSRGTPCQNIYLQDVH-----LDLSSGEKHATSSCRNVRV 412
Query: 238 TLFGKQIPATCV 249
G QIP C
Sbjct: 413 KYSGTQIPPPCA 424
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+FNV+ FGA ADG DD +AF AW+EAC G K +L+P G Y+
Sbjct: 52 LFNVRSFGAQADGHTDDRRAFTAAWKEACASTG-KVKLLIPKGTYM 96
>gi|300193452|gb|ADJ68232.1| exo-polygalacturonase [Brassica rapa subsp. campestris]
Length = 476
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 136/252 (53%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I GI S +S+ FH+N+L C N+ L ++ I A +S NT+GIHIG S G
Sbjct: 222 INIRFTGLTNSKIIGITSTNSKLFHMNVLNCKNVTLENIGIDAPPESLNTDGIHIGRSVG 281
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + + TGDDCVS+ GHGI+VGSLG+ N++ V G+TVR C
Sbjct: 282 VNLIGAKVKTGDDCVSIGDGTENLIVENVECGPGHGIAVGSLGRYPNEQPVRGVTVRKCL 341
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV PI+IDQ YCPY C VPS+VK
Sbjct: 342 IKNTSNGVRIKTWPGSPPGIASNIIFEDITMDNVSTPILIDQEYCPYADCKAGVPSKVKL 401
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V F NI+GTSA K PC N+ + NIN V+NG EGP + C+N+K
Sbjct: 402 SDVTFKNIKGTSATKTAVKLICSVGTPCTNVALANINLVHNG----PEGPAVGA-CANMK 456
Query: 237 PTLFGKQIPATC 248
P L G+ IP C
Sbjct: 457 PVLTGQMIPPAC 468
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFL 53
+VK GA DG DD+ AF W+ AC G S + VP G YL FL
Sbjct: 100 LDVKAAGAKGDGTTDDTAAFTAVWKTACEAPG-PSTITVPKGDYLVNNIEFL 150
>gi|388505978|gb|AFK41055.1| unknown [Lotus japonicus]
Length = 394
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 150/279 (53%), Gaps = 66/279 (23%)
Query: 22 ETAW-REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 80
ETAW R C+ + K L+P ++ FN++N+S + I S DS+ F++N+LGC N
Sbjct: 127 ETAWKRNDCSKN--KHCTLLP----MNFAFNYVNNSIVRDITSKDSKSFNVNVLGCNNFT 180
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
+ KI A A SPNT+GIH+G S +I ++ I TGDDCVSL GH
Sbjct: 181 FDGFKIVALALSPNTDGIHVGRSTDVKILNTNIGTGDDCVSLGDGIKNVLVRNVNCGPGH 240
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNV 160
G+SVGSLGK +++ V G V+NCT T T +I+ NV
Sbjct: 241 GVSVGSLGKYPDEKPVEGFYVKNCTLTNTDNGVRIKTWPSTPGTAPITDMHFEDIIMVNV 300
Query: 161 ENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIG 210
+NPI+IDQ YCP+N+C+ K PS++K S V F NIRGTSA +PC + +
Sbjct: 301 KNPIIIDQEYCPWNQCSKKSPSKIKISKVSFKNIRGTSATPEGVILICSSGVPCDTVEL- 359
Query: 211 NINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
NGV++ G T+ C+NVKP + GK TCV
Sbjct: 360 ------NGVDLTFNGAPATAKCANVKPIVTGKA--PTCV 390
>gi|357450765|ref|XP_003595659.1| Polygalactorunase PG11 [Medicago truncatula]
gi|357450775|ref|XP_003595664.1| Polygalactorunase PG11 [Medicago truncatula]
gi|355484707|gb|AES65910.1| Polygalactorunase PG11 [Medicago truncatula]
gi|355484712|gb|AES65915.1| Polygalactorunase PG11 [Medicago truncatula]
gi|388500188|gb|AFK38160.1| unknown [Medicago truncatula]
Length = 419
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 137/247 (55%), Gaps = 57/247 (23%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+++ FNF+N+S + G+ S DS+ FH+ + GC N+ + ITA DSPNT+GIH+G S
Sbjct: 147 FMNFGFNFVNNSLVHGVTSKDSKNFHVMVFGCNNITFDSFTITAPGDSPNTDGIHMGKST 206
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
G +I ++ I TGDDCVS+ GHG+S+GSLGK +E V G+T++NC
Sbjct: 207 GVKILNTNIGTGDDCVSIGDGSKQITVEGVKCGPGHGLSIGSLGKFTTEENVEGITIKNC 266
Query: 149 TFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
T T T +I NV+NP++IDQ YCP+N C+ K PS++
Sbjct: 267 TLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKKNPSKI 326
Query: 185 KTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
K S + F N++GTS ++ +PC + + N++ +NG TT+ C+N
Sbjct: 327 KLSKITFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFNGA-------PTTAKCTN 379
Query: 235 VKPTLFG 241
VKP + G
Sbjct: 380 VKPIVTG 386
>gi|21668071|gb|AAM74219.1|AF518563_1 putative pollen polygalacturonase [Brassica oleracea]
Length = 397
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 142/254 (55%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RF+F++++ I + S+D++ FH N++ N+ +++KI A A+SPNT+GIH+G G
Sbjct: 139 ISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ I+TGDDC+S+ GHGISVGSLG+ +++V + V NCT
Sbjct: 199 VKILNTKISTGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVNDIKVINCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
GT NI+ N V NPI+IDQ YCP+N+CN PS +K
Sbjct: 259 LEGTDNGLRIKTWPSAACTTTAAGIHFENIILNKVSNPILIDQEYCPWNQCNKSKPSTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
++ F NIRGTS NK PC+N+ IG+IN Y G +GP T C+NV
Sbjct: 319 LVDITFRNIRGTSGNKDAVKLLCSKGHPCENVEIGDINIEYTG----ADGPPTFE-CTNV 373
Query: 236 KPTLFGKQIPATCV 249
P L G Q P CV
Sbjct: 374 TPKLVGTQNPKACV 387
>gi|224102769|ref|XP_002312795.1| predicted protein [Populus trichocarpa]
gi|222849203|gb|EEE86750.1| predicted protein [Populus trichocarpa]
Length = 410
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 138/252 (54%), Gaps = 55/252 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
++F +N + + GI S++S++FHI ++ C N K +KI+A ADSPNT+GIH+ S+
Sbjct: 164 VKFVAMNQTVVQGITSLNSKFFHIALVECKNFKGTKIKISAPADSPNTDGIHVERSSSVY 223
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
IS S+I TGDDC+S+ GHGISVGSLG+ ++ +V GL VR+C +
Sbjct: 224 ISQSLIGTGDDCISIGQGNSQVTITRIRCGPGHGISVGSLGRYEDEGDVSGLVVRDCAIS 283
Query: 152 GT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
GT NIV NNV NPI+IDQ YCP++ C PS+VK S
Sbjct: 284 GTMNGIRIKTWANSPGSSAATNMTFENIVMNNVTNPIIIDQSYCPFSSCISTEPSKVKLS 343
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
++ F IRGTS++ IPCQNI + N++ + + + TS C NV+
Sbjct: 344 DIYFKQIRGTSSSAVAVALECSKGIPCQNIYLENVH-----LELSSGEKQATSSCKNVRA 398
Query: 238 TLFGKQIPATCV 249
G+QIP C
Sbjct: 399 RYIGEQIPPPCA 410
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+F+VK FGA ADG DDSKAF AW+EAC G K +L+P G YL
Sbjct: 42 LFDVKRFGARADGRTDDSKAFIAAWKEACRATG-KVELLIPKGTYL 86
>gi|356516863|ref|XP_003527112.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 389
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/247 (39%), Positives = 134/247 (54%), Gaps = 57/247 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ FNFLN S + + S DS+ FH+N+L C NL + KI+A DSPNT+GIHIG S
Sbjct: 144 MNFGFNFLNKSIVRDLTSRDSKNFHVNVLACNNLTFDGFKISAPEDSPNTDGIHIGRSTD 203
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
++ ++ IATGDDCVSL GHGISVGSLG+ N+E V GL V+NC
Sbjct: 204 VKVLNTNIATGDDCVSLGDGCKNITVQNVNCGPGHGISVGSLGRYDNEEAVEGLLVKNCI 263
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T T +I NV NP++IDQ YCP+N+C+ K PS++K
Sbjct: 264 LTDTDNGLRIKTWPSTPLTITVTDMHFEDITMKNVSNPVIIDQEYCPWNQCSKKSPSKIK 323
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NI+GTS K PC+ + + +++ +N TT+ C+NV
Sbjct: 324 ISKVSFKNIKGTSGTKEGVIFICSSGAPCEGVEMTDVDLTFNVA-------ATTAKCANV 376
Query: 236 KPTLFGK 242
KP + GK
Sbjct: 377 KPVITGK 383
>gi|30984029|gb|AAP42648.1| polygalacturonase [Brassica napus]
Length = 397
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/254 (38%), Positives = 142/254 (55%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RF+F++++ I + S+D++ FH N++ N+ +++KI A A+SPNT+GIH+G G
Sbjct: 139 ISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ I+TGDDC+S+ GHGISVGSLG+ +++V + V NCT
Sbjct: 199 VKILNTKISTGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVNDIKVINCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
GT NI+ N V NPI+IDQ YCP+N+CN PS +K
Sbjct: 259 LEGTDNGLRIKTWPSAACTTTAAGIHFENIILNKVSNPILIDQEYCPWNQCNKSKPSTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
++ F NIRGTS NK PC+N+ IG+IN Y G +GP T C+NV
Sbjct: 319 LVDITFRNIRGTSGNKDAVKLLCSKGHPCENVEIGDINIEYTG----PDGPPTFE-CTNV 373
Query: 236 KPTLFGKQIPATCV 249
P L G Q P CV
Sbjct: 374 TPKLVGTQNPKACV 387
>gi|356551848|ref|XP_003544285.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 386
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/250 (39%), Positives = 139/250 (55%), Gaps = 57/250 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ F F+N+S I I S DS+YFH+N+ GC N+ + ++++ A SPNT+GIHIG S
Sbjct: 140 MNFGFGFVNNSVIHDITSKDSKYFHVNVFGCKNISFTNFRVSSPAYSPNTDGIHIGKSTQ 199
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I++S I TGDDC+SL GHGISVGSLGK N++ V + V+NCT
Sbjct: 200 VKITNSKIDTGDDCISLGDGSKEVTILNVTCGPGHGISVGSLGKYSNEDSVEDVIVKNCT 259
Query: 150 FTGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
TN I NV NPI+IDQ YCP+N+C+ + PS++K
Sbjct: 260 LKNTNNGLRIKTWPGTAIISLASDLHFEDITMINVSNPIIIDQEYCPWNQCSKQSPSKIK 319
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NIRGTSA + IPC+ + + +IN +NG + T+ C+NV
Sbjct: 320 ISKVTFKNIRGTSATQEGITLVCSSGIPCETVELSDINLRFNGTTL------VTAKCANV 373
Query: 236 KPTLFGKQIP 245
KP + G++ P
Sbjct: 374 KPKI-GRKAP 382
>gi|449445367|ref|XP_004140444.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449487925|ref|XP_004157869.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 401
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 137/254 (53%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++FNF+ +S + I S+DS+ FHIN+LGC N+ + I+A +SPNT+GIHI SS
Sbjct: 142 MTLKFNFVTNSIVKDITSLDSKNFHINLLGCKNITFEHVTISAPENSPNTDGIHISSSEQ 201
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ I+TGDDCVS+ GHGIS+GSLGK ++ V G+ V C
Sbjct: 202 IRILNTKISTGDDCVSVGDSNKDITIRDVTCGPGHGISIGSLGKYTKEKAVEGVWVTKCK 261
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I +V NPI+IDQ YCP+N+CN K+PS +K
Sbjct: 262 LIKTTNGVRIKTWPDSAVKYSASDMHFEDIEMIDVSNPILIDQEYCPWNQCNRKIPSSIK 321
Query: 186 TSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NIRGT+ + IPC+ + + +I+ YNG + TS C+NV
Sbjct: 322 ISKVSFKNIRGTTVTPVAVKLVCSKSIPCEAVEVADIDLKYNGNKGSI-----TSQCANV 376
Query: 236 KPTLFGKQIPATCV 249
KP + GKQ P C
Sbjct: 377 KPIISGKQNPRICA 390
>gi|29123382|gb|AAO62938.1| polygalactorunase PG11 precursor [Medicago sativa]
Length = 407
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 141/264 (53%), Gaps = 61/264 (23%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G S V + ++++ F F+N+S + G+ S DS+ FH+ +LGC N + +T
Sbjct: 134 AAAWSGKNSNVKI----FMNLGFMFVNNSMVHGLTSKDSKNFHVMVLGCNNFTFDGFTVT 189
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A DSPNT+GIH+G S +I ++ IATGDDC+SL GHGISVGSL
Sbjct: 190 APGDSPNTDGIHMGRSTDIKILNTNIATGDDCISLGDGSRKITVQNVKCGPGHGISVGSL 249
Query: 132 GKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVID 167
GK ++ V G+ V+NCT T T +I+ NNV NP++ID
Sbjct: 250 GKYTTEDNVEGVIVKNCTLTATQNGVRIKTWPDAPGTITVSDIHFEDIIMNNVMNPVIID 309
Query: 168 QLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYN 217
Q YCP+N+C+ K PS++K S + F NI+GTS ++ +PC + + N+ +N
Sbjct: 310 QEYCPWNQCSKKNPSKIKLSKISFKNIQGTSGTPEGVVLICSSGVPCDGVELNNVGLTFN 369
Query: 218 GVNVKVEGPETTSLCSNVKPTLFG 241
G + CSNVKP + G
Sbjct: 370 -------GKPAIAKCSNVKPLVTG 386
>gi|449453569|ref|XP_004144529.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 412
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 139/254 (54%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++F+F+ +S + I S+DS+ FH N+LGC N+ ++ I A +SPNT+GIH+ SS
Sbjct: 153 MNVKFSFVTNSMVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEV 212
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ I+TGDDC+S+ GHGIS+GSLGK ++EV G+TV++C
Sbjct: 213 INIFNTRISTGDDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCK 272
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I NV NP++IDQ YCP N+CN K+PS++K
Sbjct: 273 LINTSNGVRIKTWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIK 332
Query: 186 TSNVRFNNIRGTSANKIP----------CQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
SNV F NIRGTSA + C+ + + +I+ Y G ++ TS C NV
Sbjct: 333 ISNVSFKNIRGTSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRI-----TSQCRNV 387
Query: 236 KPTLFGKQIPATCV 249
P + GKQ P CV
Sbjct: 388 IPIITGKQNPRACV 401
>gi|3024387|sp|Q40312.1|PGLR_MEDSA RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|668998|gb|AAA62286.1| polygalacturonase [Medicago sativa]
Length = 421
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 141/264 (53%), Gaps = 61/264 (23%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G S V +++ FNF+N+S + G+ S DS+ FH+ + GC N+ + IT
Sbjct: 134 ASAWSGKNSNSKV----FMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTIT 189
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A DSPNT+GIH+G S +I ++ I TGDDCVS+ GHG+SVGSL
Sbjct: 190 APGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSL 249
Query: 132 GKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVID 167
GK +E V G+TV+NCT T T +I NV+NP++ID
Sbjct: 250 GKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIID 309
Query: 168 QLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYN 217
Q Y P+N+C+ K PS++K S + F N++GTS ++ +PC + + N++ +N
Sbjct: 310 QEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFN 369
Query: 218 GVNVKVEGPETTSLCSNVKPTLFG 241
G TT+ C+NVKP + G
Sbjct: 370 GA-------PTTAKCTNVKPLVTG 386
>gi|225423446|ref|XP_002273801.1| PREDICTED: exopolygalacturonase [Vitis vinifera]
gi|297738101|emb|CBI27302.3| unnamed protein product [Vitis vinifera]
Length = 396
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 105/252 (41%), Positives = 136/252 (53%), Gaps = 55/252 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ F F+ + I I S++S+ FH NI + +N +KI A A+SPNT+GIHIG SN
Sbjct: 151 SLSFKFVTNGRIDHITSINSKMFHFNIYDNQKISINHVKILAPAESPNTDGIHIGRSNDI 210
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I++S I TGDDC+SL GHGISVGSLGK +EEV G+TVRNCTF
Sbjct: 211 RITNSEIRTGDDCISLKQGSRDIHIQNVQCGPGHGISVGSLGKDEGEEEVRGITVRNCTF 270
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
G+ +IV NV NPI IDQ YCP+ CN + SQV+
Sbjct: 271 QGSDNGLRIKTWAASTRNIASDFTFEDIVVENVRNPINIDQEYCPHPPCN-EGESQVEIK 329
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
NV+F NIRGTS+ K IPC +I + NI+ VY+ +G TS C +V
Sbjct: 330 NVKFRNIRGTSSTKVAVSLICSSRIPCSDIELHNIDLVYHD-----QGGPATSSCRHVNG 384
Query: 238 TLFGKQIPATCV 249
G Q P +C+
Sbjct: 385 VSSGVQRPPSCI 396
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV ++GA+A+G D+S+A AW EAC+W G VL+P G Y+
Sbjct: 29 VFNVMNYGAIANGHYDNSEALGRAWNEACHWKG-TGVVLIPRGTYM 73
>gi|224061322|ref|XP_002300425.1| predicted protein [Populus trichocarpa]
gi|222847683|gb|EEE85230.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 142/253 (56%), Gaps = 56/253 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+R F+ + + I+S++S+ H+++ GC NL +++L+++A DSPNT+GI IGSS
Sbjct: 121 ISLRLEFIQNGMVRYIRSINSQNAHMSLFGCVNLNMSNLRLSAPGDSPNTDGIKIGSSEE 180
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSL-GKGINDEEVVGLTVRNC 148
+IS + I TGDDCV++ GHGISVGS+ G+G E VVG+TV++C
Sbjct: 181 IKISKTRIGTGDDCVAILSGSKNINISQVHCGPGHGISVGSMGGEGSVTESVVGVTVKDC 240
Query: 149 TFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
TF GT NI NV NPI+IDQ YCPY C +K PS+++
Sbjct: 241 TFNGTSDGTRIKTWASSTTGVASNFIYENIRMMNVGNPIIIDQDYCPYPPCGMKTPSRIQ 300
Query: 186 TSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
++ FNNI GTS + +PC+NI + +I++ + G SLCSN
Sbjct: 301 IKDITFNNIWGTSESNVAVTLNCSRTVPCKNILLKDISFFHG------RGGSVRSLCSNA 354
Query: 236 KPTLFGKQIPATC 248
+ T +G+Q P +C
Sbjct: 355 RGTSYGRQTPPSC 367
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLND 55
VFNVK +GAV+DG +++KAF AW EAC W G K+ VL+P G Y+ FL +
Sbjct: 2 VFNVKKYGAVSDGKTENNKAFLKAWSEACQWHG-KAMVLIPRGVYILDSVLFLGE 55
>gi|449508876|ref|XP_004163433.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 412
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++F+F+ +S + I S+DS+ FH N+LGC N+ ++ I A +SPNT+GIH+ SS
Sbjct: 153 MNVKFSFVTNSMVKDITSLDSKNFHFNLLGCKNVTFQNVTIIAPENSPNTDGIHVSSSEV 212
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ I+TGDDC+S+ GHGIS+GSLGK ++EV G+TV++C
Sbjct: 213 INIFNTRISTGDDCISVGDSNKQITITNVTCGPGHGISIGSLGKYTKEKEVAGVTVKSCK 272
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I NV NP++IDQ YCP N+CN K+PS++K
Sbjct: 273 LINTSNGVRIKTWPDCAVAYTASDLHFEDIEMVNVSNPVIIDQEYCPSNQCNKKIPSKIK 332
Query: 186 TSNVRFNNIRGTSANKIP----------CQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+NV F NIRGTSA + C+ + + +I+ Y G ++ TS C NV
Sbjct: 333 INNVSFKNIRGTSATFVAVKFICSTVFSCEGVEVTDIDLAYIGTQGRI-----TSQCRNV 387
Query: 236 KPTLFGKQIPATCV 249
P + GKQ P CV
Sbjct: 388 IPIITGKQNPRACV 401
>gi|255570469|ref|XP_002526193.1| hypothetical protein RCOM_0764760 [Ricinus communis]
gi|223534497|gb|EEF36197.1| hypothetical protein RCOM_0764760 [Ricinus communis]
Length = 392
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 135/243 (55%), Gaps = 54/243 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF+F+ ++ I + S DS+ FH+N++GC N L +KI A DS NT+GIHIG SNG
Sbjct: 145 MNLRFDFVTNTIIEDLTSRDSKNFHMNLIGCQNFTLQRIKIIAPGDSANTDGIHIGRSNG 204
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
I S I TGDDC+S+ GHGIS+GSLGK N+E V G+ V+ C
Sbjct: 205 VNIIDSKIGTGDDCISIGDGSRNIKITGVRCGPGHGISIGSLGKYKNEEPVSGVYVKKCD 264
Query: 149 ---------------TFTGT-------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
++GT +I NNV N I+IDQ+YCP+N CN K S VK
Sbjct: 265 LINTTNGIRIKSWPGLYSGTATDLHFEDISMNNVSNAILIDQMYCPWNHCNSKASSNVKI 324
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S V F+NI+GTS + +PC+ + + NIN VY G EGP S C+NVK
Sbjct: 325 SKVTFSNIKGTSSIPTIVKLLCSKGLPCEGVELNNINVVYKG----PEGP-AKSECTNVK 379
Query: 237 PTL 239
P +
Sbjct: 380 PKI 382
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+VK+FGA D SKA AW+ AC+ G S +L+P KY
Sbjct: 25 VFDVKNFGATPSQKNDISKALLDAWKAACSTPG-ASRILIPHAKY 68
>gi|225431792|ref|XP_002272193.1| PREDICTED: exopolygalacturonase [Vitis vinifera]
gi|296083328|emb|CBI22964.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 138/251 (54%), Gaps = 52/251 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+FN + + + GI SV+++ FHI + C N + L ITA DSPNT+GIHI SSN
Sbjct: 179 SIKFNSITNGNLRGINSVNAKSFHIAMNRCQNFRAFGLHITAPEDSPNTDGIHISSSNFV 238
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++S S+I+TGDDC+S+ GHGIS+GSLGK ++++V+G+ V+N T
Sbjct: 239 KVSKSIISTGDDCISIGQGSTNISINKVTCGPGHGISIGSLGKYPDEKDVIGIIVKNSTL 298
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +I+ NV+NPI+IDQLYCP PS+V+ S
Sbjct: 299 MNTDNGLRIKTWPGSPPSQASGILFQDIIMKNVKNPIIIDQLYCPSGSSCRTQPSRVRIS 358
Query: 188 NVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
N+ + NIRGTS++ + PCQN+ + +IN Y+G K TS CSNVK
Sbjct: 359 NIHYRNIRGTSSSPLGVNLMCSPQFPCQNVELFDINLRYSG---KRRVSALTSSCSNVKA 415
Query: 238 TLFGKQIPATC 248
G QIP C
Sbjct: 416 GFGGVQIPPPC 426
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+FNV +GA G KD ++AF AW AC+W G K+ +L+P G +L + F
Sbjct: 55 IFNVLQYGAKPGGKKDSTEAFMKAWVAACHWRG-KARLLIPQGIFLIGQVTF 105
>gi|449463751|ref|XP_004149595.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449520777|ref|XP_004167409.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 360
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 144/257 (56%), Gaps = 57/257 (22%)
Query: 44 KYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSS 103
+ +S+R N +N++ IT IKS +S+ FH + GC ++ + + + A A+SPNT+GIHI SS
Sbjct: 110 RPVSMRLNGINNARITNIKSYNSKLFHFAMHGCRDVTFDHVTVIAPANSPNTDGIHISSS 169
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRN 147
+G I HS I TGDDC+SL GHGIS+GSLGK N+E+V +TVR+
Sbjct: 170 SGINIMHSTIGTGDDCISLGPGSKFINITNIQCGPGHGISIGSLGKYPNEEDVFEVTVRD 229
Query: 148 CTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ- 183
TF GT N+ NNV+NPI+IDQ YCP + + K+ S+
Sbjct: 230 STFIGTSNGVRIKTWSSSYSSMVSKVTFLNLQMNNVKNPIIIDQNYCPGSCGSQKMMSKS 289
Query: 184 -VKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ +VR+ IRG+S + +PCQ I + +IN +NG G TTS C
Sbjct: 290 MVQIKDVRYEGIRGSSNTQVAVDFECSEVVPCQGIVLQDINLPFNG------GGRTTSNC 343
Query: 233 SNVKPTLFGKQIPATCV 249
NV+ + FG Q+P +C+
Sbjct: 344 HNVRGSAFGHQLPPSCL 360
>gi|222640352|gb|EEE68484.1| hypothetical protein OsJ_26895 [Oryza sativa Japonica Group]
Length = 389
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 109/356 (30%), Positives = 161/356 (45%), Gaps = 115/356 (32%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS-------------- 47
FNV+++GA +G DDSKA TAW+ AC G + VL P Y+
Sbjct: 39 FNVRNYGAKGNGQTDDSKALMTAWKAACAATGAVTLVLPPGTYYIGPGTLKAATDLKRFG 98
Query: 48 ---IRFNFLNDSTITG-------------------------------------------- 60
+ F ++N ++G
Sbjct: 99 NDWVEFGWVNHLIVSGQNGAAFDGQGAASWPFNKCPIRKDCKVLPTSVLFVNNKNMVVQN 158
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
+ SV+S++FH+ +L C K++ +KI+A SPNT+GIHI SNG I+ + IATGDDC+
Sbjct: 159 VASVNSKFFHMALLQCSGAKISGVKISAPESSPNTDGIHIERSNGVSIADTTIATGDDCI 218
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------- 153
S+ GHG+SVGSLG+ + + +V + VR+ TF GT
Sbjct: 219 SIGQGNDNIDVARVHCGPGHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRIKTWEN 278
Query: 154 -------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN 200
N+V N+V+NPI+IDQ YCPY C K S V +V+F NI+GT+
Sbjct: 279 SPTKSNAAHMLFENLVMNDVQNPIIIDQKYCPYYNCEHKFVSGVTIKDVQFKNIKGTATT 338
Query: 201 K--------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
+ +PCQ + + +++ Y G V ++S C NV+ G Q P C
Sbjct: 339 QVAVLLKCGVPCQGVVLQDVDLRYKGNGV------SSSKCENVRAKYAGFQNPKPC 388
>gi|356551512|ref|XP_003544118.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 392
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 132/249 (53%), Gaps = 57/249 (22%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
FNFLN+S + I S DS+ FH+N+LGC N + ++A S NT+GIHIG S +I
Sbjct: 149 FNFLNNSMVRDITSKDSKNFHVNVLGCNNFTFDGFHVSAPNTSINTDGIHIGRSTDVKIL 208
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
++ IATGDDCVSL GHGISVGSLGK +E V L V+NCT T T
Sbjct: 209 NTNIATGDDCVSLGDGSKKITVQNVNCGPGHGISVGSLGKYPEEEPVEQLLVKNCTLTNT 268
Query: 154 ------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
+I +V NP++IDQ YCP+N+C+ + PS++K S V
Sbjct: 269 DNGVRIKTWPSSPGASPITDMHFEDITMVDVMNPVIIDQEYCPWNQCSKQAPSKIKISKV 328
Query: 190 RFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
F NI+GTS K +PC+++ + N+ +NG + + C+NVKP +
Sbjct: 329 TFKNIQGTSKTKEGVTLICSKGVPCEDVELNNVALTFNGAPI-------VAKCANVKPIV 381
Query: 240 FGKQIPATC 248
GK TC
Sbjct: 382 TGKAPACTC 390
>gi|34223511|gb|AAQ62998.1| oil palm polygalacturonase allergen PEST459 [Elaeis guineensis]
Length = 399
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 139/252 (55%), Gaps = 56/252 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S++F +++ + IKS++S++FHI ++GC N +++ITA ++SPNT+GIHI S G
Sbjct: 153 SVKFVATSNTLVQNIKSLNSKFFHIALVGCKNFWGKNIQITAPSNSPNTDGIHIERSTGV 212
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +SVI TGDDC+S+ GHGIS+GSLG+ N+ +V GL +++ T
Sbjct: 213 TIYNSVIGTGDDCISIGHSNSEILLSGISCGPGHGISIGSLGRYHNEGDVRGLVIKDSTL 272
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
GT NIV N+V NPI+IDQ+YCPY+ C PS V
Sbjct: 273 AGTSNGVRIKTWENSPGTSKAVNMTFENIVMNSVANPIIIDQMYCPYSSCASDAPSGVIL 332
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S++ F NIRGTS + +PC+N+ + ++N Y G + P T S C NVK
Sbjct: 333 SDIFFRNIRGTSTTPVAVTLRCSRGVPCKNVNLQDVNLKYVG-----QLPATAS-CMNVK 386
Query: 237 PTLFGKQIPATC 248
+ G QIP C
Sbjct: 387 ASYSGTQIPPPC 398
>gi|255570465|ref|XP_002526191.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223534495|gb|EEF36195.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 392
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/243 (39%), Positives = 131/243 (53%), Gaps = 54/243 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF+F+ ++ + + S DS+ FH+N++GC N L +KI A DS NT+GIHIG SN
Sbjct: 145 MNLRFDFVTNTIVENLTSRDSKNFHMNLIGCQNFTLQRIKIIAPGDSANTDGIHIGRSNE 204
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I S I TGDDC+S+ GHGIS+GSLGK N+E V G+ V+ C
Sbjct: 205 VNIIDSKIGTGDDCISIGDGSRNIKITGVRCGPGHGISIGSLGKYKNEEPVSGVYVKKCD 264
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I NNV N I+IDQ+YCP+N CN K S VK
Sbjct: 265 LINTSNGIRIKSWPGLYSGAATDMHFEDISMNNVSNAILIDQMYCPWNHCNSKASSNVKI 324
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S V F+NI+GTS+ +PC+ + + NIN VY G +GP S C+NVK
Sbjct: 325 SKVTFSNIKGTSSTPTIVKLLCSKGLPCEGVELNNINVVYKG----PDGP-AKSECTNVK 379
Query: 237 PTL 239
P +
Sbjct: 380 PKI 382
>gi|3413322|emb|CAA72003.1| polygalacturonase [Medicago sativa]
Length = 395
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 137/270 (50%), Gaps = 62/270 (22%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ETAWR+ N G S + ++ FNFL S + I S DS+ FH+N+LGC N
Sbjct: 127 ETAWRQ--NDCGKNSTC---KRRSMNFGFNFLKHSIVRDITSKDSKNFHVNVLGCTNFTF 181
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ + ITA S NT+GIHIG S ++ ++ IATGDDCVSL GHG
Sbjct: 182 DSVTITAPVTSINTDGIHIGRSTDVKVLNTNIATGDDCVSLGDGSRQITVQNVNCGPGHG 241
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVE 161
ISVGSLGK +E V + V+NCT T T +I+ NV
Sbjct: 242 ISVGSLGKYPKEEAVEHVLVKNCTITNTDNGVRIKTWPSSPGTSPITDMHFEDIIMVNVL 301
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
NP++IDQ YCP+N+C+ VPS++K S V F NIRGTS K PC + + N
Sbjct: 302 NPVIIDQEYCPWNQCSKLVPSKIKISKVIFKNIRGTSKTKDGVVLICSKSFPCDAVELNN 361
Query: 212 INWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
+ +NG V + C NVKP L G
Sbjct: 362 VALTFNGAPVNAK-------CVNVKPILTG 384
>gi|359485475|ref|XP_002282563.2| PREDICTED: polygalacturonase [Vitis vinifera]
Length = 312
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 151/307 (49%), Gaps = 81/307 (26%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL----------SIRF 50
+F+V +GA DG D S+A AW +AC+ + S V++P G Y
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTYALGQIIIAGPCKAPI 85
Query: 51 NFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISH 110
NF+ T+ + VD+ F +++ ++ +G+ G
Sbjct: 86 NFVVQGTV--MAPVDTSRFRAEAGWITFQQIDQFTLSG-------DGVFDGQGK------ 130
Query: 111 SVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT- 153
+I TGDDCVS+ GHGISVGSLGK N+E VVG++V+NCT T T
Sbjct: 131 -IIETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISVKNCTLTNTQ 189
Query: 154 ----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRF 191
+IV NNV NPI+IDQ YCP+N+CN+K PS++K SNV F
Sbjct: 190 NGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPSRIKISNVSF 249
Query: 192 NNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
NIRGT++ + +PCQ++ +G+IN YNG +GP S C N+KP + G
Sbjct: 250 RNIRGTTSTQVAVKLICSQGVPCQDVELGDINLEYNG----NDGP-AMSQCKNIKPNVLG 304
Query: 242 KQIPATC 248
Q+P C
Sbjct: 305 AQLPRIC 311
>gi|449463753|ref|XP_004149596.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449520775|ref|XP_004167408.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 349
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/259 (37%), Positives = 142/259 (54%), Gaps = 62/259 (23%)
Query: 44 KYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSS 103
+ +S++FN +N ++I I S DS++FH + ++ +++ + A A+SPNT+GIHI +S
Sbjct: 100 RPISMKFNNVNTASIKNISSFDSKFFHFAVHASRDVTFDNVTVVAPANSPNTDGIHISTS 159
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRN 147
+G I HS I TGDDC+SL GHGIS+GSLGK N+E+V +TVR+
Sbjct: 160 SGINIMHSTIGTGDDCISLGPGSKMINISNVHCGPGHGISIGSLGKNPNEEDVFDVTVRD 219
Query: 148 CTFTGT-----------------------NIVTNNVENPIVIDQLYCP----YNKCNIKV 180
TF GT N+ NNV+NPI+IDQ YCP NK N
Sbjct: 220 STFIGTSNGARIKSWSSPYSSMVSKVTFLNLQMNNVKNPIIIDQSYCPDSCAPNKMN--- 276
Query: 181 PSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTS 230
S V+ +VR+ I G+S + +PCQ I + +IN +NG G +TTS
Sbjct: 277 KSMVQIKDVRYQGITGSSNTPVAVDFECSQVLPCQGIVLQDINLTFNG------GGKTTS 330
Query: 231 LCSNVKPTLFGKQIPATCV 249
+C NVK + G+Q+P +C+
Sbjct: 331 ICHNVKGSASGQQLPPSCL 349
>gi|356499491|ref|XP_003518573.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 391
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 131/252 (51%), Gaps = 57/252 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ FNF+N S + GI S DS+ FH+ + GCYN + I+A S NT+GIHIG S
Sbjct: 146 MNFGFNFVNHSMVRGITSKDSKSFHVILFGCYNFTFDGFHISAPETSINTDGIHIGKSTD 205
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ IATGDDCVSL GHGISVGSLGK N+E V L V+NCT
Sbjct: 206 VKILNTNIATGDDCVSLGDGSIHVTVQNVNCGPGHGISVGSLGKYTNEEPVKDLLVKNCT 265
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T T +I +V NP++IDQ YCP+N C + PS++K
Sbjct: 266 LTNTENGVRIKTWPNSSQTYLVTDMHFEDITMVDVLNPVIIDQEYCPWNHCPKQSPSKIK 325
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
V F++I+GTS +K +PC+++ + N+ + +G + C+NV
Sbjct: 326 IRKVSFSDIKGTSKSKEGVIFICSKAVPCEDVELNNVALTF-------KGDPIVAKCANV 378
Query: 236 KPTLFGKQIPAT 247
+P GK P T
Sbjct: 379 RPKFAGKAPPCT 390
>gi|297804362|ref|XP_002870065.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297315901|gb|EFH46324.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 414
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 139/258 (53%), Gaps = 56/258 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S++F +N + + I SV+S++FHI ++ C + K L ITA +DSPNT+GIHI S+
Sbjct: 156 SLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNV 215
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
S S IATGDDCVS+ GHGISVGSLG+ N+++V GL V++C
Sbjct: 216 YFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVKGLVVKDCKI 275
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
+GT NI+ NNV NPI+IDQ YCP++ C VPS+V+
Sbjct: 276 SGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVEL 335
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVN-----VKVEGPET-TS 230
S + F NIRGTS++++ PC+ + + N++ + + + G E +S
Sbjct: 336 SEIYFKNIRGTSSSRVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSRNRGNEAVSS 395
Query: 231 LCSNVKPTLFGKQIPATC 248
C NV+ G QIP C
Sbjct: 396 SCRNVRANYIGTQIPPPC 413
>gi|449524593|ref|XP_004169306.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 424
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 135/252 (53%), Gaps = 55/252 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
++FN +N+S + I S+DS+ FHIN+ C N+ L ++ I + +PN++GIH+ SS
Sbjct: 161 VKFNSINNSIVKDITSLDSQNFHINLFDCKNVTLQNVTIISPESNPNSDGIHVSSSEEIN 220
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I ++ I+ G DCVS+ G GIS+GSLG+ N EV G+TV++C
Sbjct: 221 ILNTQISNGADCVSVGDSSKQITITNVTCGPGDGISIGSLGRYANRTEVTGVTVKSCKLI 280
Query: 152 GT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +I NV NP+VI+Q YCP+++C+ K+PS++K S
Sbjct: 281 NTWNGVRIKSWPDSASAYTASDLHFEDIEMVNVSNPVVINQEYCPFDQCDKKIPSKIKIS 340
Query: 188 NVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
NV F NIRGTSA + PC+++ + +I+ Y G ++ TS C NV P
Sbjct: 341 NVSFKNIRGTSATSVAIQLICSKDLPCEDVEVADIDLTYTGTQGRI-----TSQCRNVIP 395
Query: 238 TLFGKQIPATCV 249
+ GKQ P CV
Sbjct: 396 IITGKQNPRACV 407
>gi|449453734|ref|XP_004144611.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 506
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 135/252 (53%), Gaps = 55/252 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
++FN +N+S + I S+DS+ FHIN+ C N+ L ++ I + +PN++GIH+ SS
Sbjct: 243 VKFNSINNSIVKDITSLDSQNFHINLFDCKNVTLQNVTIISPESNPNSDGIHVSSSEEIN 302
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I ++ I+ G DCVS+ G GIS+GSLG+ N EV G+TV++C
Sbjct: 303 ILNTQISNGADCVSVGDSSKQITITNVTCGPGDGISIGSLGRYANRTEVTGVTVKSCKLI 362
Query: 152 GT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +I NV NP+VI+Q YCP+++C+ K+PS++K S
Sbjct: 363 NTWNGVRIKSWPDSASAYTASDLHFEDIEMVNVSNPVVINQEYCPFDQCDKKIPSKIKIS 422
Query: 188 NVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
NV F NIRGTSA + PC+++ + +I+ Y G ++ TS C NV P
Sbjct: 423 NVSFKNIRGTSATSVAIQLICSKDLPCEDVEVADIDLTYTGTQGRI-----TSQCRNVIP 477
Query: 238 TLFGKQIPATCV 249
+ GKQ P CV
Sbjct: 478 IITGKQNPRACV 489
>gi|92429375|gb|ABE77145.1| putative polygalacturonase [Fragaria x ananassa]
Length = 405
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 139/252 (55%), Gaps = 46/252 (18%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G +++RF+ + +S + + S++S+ FH NILGC +L + + A DSPNT+GIH+G
Sbjct: 152 GLAINVRFDRVKNSLVRDVTSLNSKNFHFNILGCEHLTFQHVIVKAPGDSPNTDGIHMGR 211
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S I+ + I TGDDC+S+ GHGIS+GSLG+ N+++V GL +R
Sbjct: 212 STRINITDTNIGTGDDCISVGDGTRQLTVSKVSCGPGHGISIGSLGRYDNEDDVSGLNIR 271
Query: 147 NCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+CT + T I NNV NP++IDQ YCP+ +CN ++PS
Sbjct: 272 DCTLSNTLNGVRIKTFPASPKATTASDIHFEKITMNNVANPVLIDQEYCPWGQCNKQIPS 331
Query: 183 QVKTSNVRFNNIRGTS----ANKIPCQNIGIGNINWVYNGVNVKVEGPET-TSLCSNVKP 237
+VK SNV F NI GT+ A KI C G+ V + +++K+ G T TS C+NV+P
Sbjct: 332 KVKISNVSFKNIIGTTSTAEALKIVCAK-GLHCDQVVLSDIDLKLSGKGTLTSHCANVQP 390
Query: 238 TLFGKQIPATCV 249
T+ P C
Sbjct: 391 TITRVPPPLACA 402
>gi|147819171|emb|CAN69218.1| hypothetical protein VITISV_012014 [Vitis vinifera]
Length = 863
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 139/252 (55%), Gaps = 55/252 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+FN + + + GI SV+++ FHI + C N + L ITA DSPNT+GIHI SSN
Sbjct: 179 SIKFNSITNGNLRGINSVNAKSFHIAMNRCQNFRAFGLXITAPEDSPNTDGIHISSSNFV 238
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++S S+I+TGDDC+S+ GHGIS+GSLGK ++++V+G+ V+N T
Sbjct: 239 KVSKSIISTGDDCISIGQGSTNISINKVTCGPGHGISIGSLGKYPDEKDVMGIIVKNSTL 298
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +I+ NV+NPI+IDQLYCP PS+V+ S
Sbjct: 299 MNTDNGLRIKTWPGSPPSQASGILFQDIIMKNVKNPIIIDQLYCPSGSSCRTQPSRVRIS 358
Query: 188 NVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
N+ + NIRGTS++ + PCQN+ + +IN Y+G K TS CSNVK
Sbjct: 359 NIHYRNIRGTSSSPLGVNLMCSPQFPCQNVELFDINLRYSG---KRRVSALTSSCSNVKA 415
Query: 238 TLFGKQIPATCV 249
G++ TC+
Sbjct: 416 GFGGEE---TCL 424
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 49/208 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I+ I + + FH+ I+ N+ ++ + ITA +SPNT+G+HIG S I+ S I GD
Sbjct: 628 ISNITLKNGKGFHMGIINSDNVTVHGVNITAPWNSPNTDGVHIGYSTNIHITSSTIGVGD 687
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DCVS+ GHGISVGSLGK +++VVG+ V+NCT GT
Sbjct: 688 DCVSIGPGSINITVFNTKCGPGHGISVGSLGKYSAEKDVVGVRVKNCTINGTQNGVRIKT 747
Query: 154 ---------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS 198
+IV NV NPI+IDQ YCP++ C PS VK S++ F NIRGT
Sbjct: 748 WPGSPASKASSFWFEDIVMINVSNPIIIDQEYCPWSTCTSSKPSLVKLSDIHFTNIRGTF 807
Query: 199 ANK----------IPCQNIGIGNINWVY 216
K +PC++I + NIN +
Sbjct: 808 NTKSAVALMCSSSVPCEDIQLLNINLTH 835
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+FNV +GA G KD ++AF AW AC+W G K+ +L+P G +L + F
Sbjct: 55 IFNVLQYGAKPGGKKDSTEAFMKAWVAACHWRG-KARLLIPQGIFLIGQVTF 105
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFL 53
+F+V +GAV DG ++ AF AW +ACN G KS +LVP G + +F+
Sbjct: 489 IFDVTMYGAVGDGKTENGMAFLAAWDDACNHPG-KSTLLVPNGTFFIGPISFI 540
>gi|30908915|gb|AAP37458.1| polygalacturonase [Fragaria x ananassa]
Length = 405
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 138/252 (54%), Gaps = 46/252 (18%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G +++RF+ + +S + + S++S+ FH NILGC +L + + A DSPNT+GIH+G
Sbjct: 152 GLAINVRFDRVKNSLVRDVTSLNSKNFHFNILGCEHLTFQHVIVKAPGDSPNTDGIHMGR 211
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S I+ + I TGDDC+S+ GHGIS+GSLG+ N+++V GL +R
Sbjct: 212 STRINITDTNIGTGDDCISVGDGTRQLTVSKVSCGPGHGISIGSLGRYDNEDDVSGLNIR 271
Query: 147 NCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+CT + T I N V NP++IDQ YCP+ +CN ++PS
Sbjct: 272 DCTLSNTLNGVRIKTFPASPKATTASDIHFEKITMNYVANPVLIDQEYCPWGQCNKQIPS 331
Query: 183 QVKTSNVRFNNIRGTS----ANKIPCQNIGIGNINWVYNGVNVKVEGPET-TSLCSNVKP 237
+VK SNV F NI GT+ A KI C G+ V + +++K+ G T TS C+NV+P
Sbjct: 332 KVKISNVSFKNIIGTTSTAEALKIVCAK-GLHCDQVVLSDIDLKLSGKGTLTSHCANVQP 390
Query: 238 TLFGKQIPATCV 249
T+ P C
Sbjct: 391 TITRVPPPLACA 402
>gi|61393763|gb|AAX45476.1| polygalacturonase [Lilium longiflorum]
gi|73913442|gb|AAZ91659.1| polygalacturonase [Lilium longiflorum]
Length = 413
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 139/254 (54%), Gaps = 56/254 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S++F+ ++TI I S+DS++FHI I C ++ ++ + ITA SPNT+GIHIG S
Sbjct: 152 SVKFDHCTNATIRRINSIDSKFFHIAIDQCTDITVHHINITAPGTSPNTDGIHIGRSTNV 211
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS+++I TGDDC+SL GHGISVGSLG+ +N+E V + V+NCT
Sbjct: 212 NISNAIIGTGDDCISLGPGSSHITISKVQCGPGHGISVGSLGRYMNEENVWDVKVKNCTL 271
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKC--NIKVPSQVK 185
TGT +I V+NPI+IDQ YC Y+ C N PS+VK
Sbjct: 272 TGTTNGVRIKTWKGSSPSEASQFIFQDIEMREVQNPIIIDQEYCSYDYCANNPPAPSKVK 331
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S+++F NI+GTS +K +PC+ I + +I+ Y ++ P T + CS+V
Sbjct: 332 LSDIQFMNIKGTSTSKVAINLICSSAVPCEGIQLSDISLKY----IRAGKP-TMANCSHV 386
Query: 236 KPTLFGKQIPATCV 249
T G P +C+
Sbjct: 387 SGTTSGLVSPPSCI 400
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
NVK FGAV DG D ++A AW +ACN G K V+VP G YL+ F
Sbjct: 32 NVKSFGAVGDGKTDSTQAILRAWDQACNGFG-KQRVIVPEGVYLTGPMAF 80
>gi|149688361|gb|ABR26683.1| polygalacturonase [Fragaria chiloensis]
Length = 405
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 138/252 (54%), Gaps = 46/252 (18%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G +++RF+ + +S + + S++S+ FH NILGC +L + + A DS NT+GIH+G
Sbjct: 152 GLAINVRFDKVKNSLVRDVTSLNSKNFHFNILGCEHLTFQHVTVKAPGDSSNTDGIHMGR 211
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S I+ + I TGDDC+S+ GHGIS+GSLG+ N+++V GL +R
Sbjct: 212 STEINITDTNIGTGDDCISVGDGTRQLTVSKVSCGPGHGISIGSLGRYDNEDDVSGLNIR 271
Query: 147 NCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+CT + T I NNV NP++IDQ YCP+ +CN ++PS
Sbjct: 272 DCTLSNTLNGVRIKTFPASPKATPASDIHFEKITMNNVANPVLIDQEYCPWGQCNKQIPS 331
Query: 183 QVKTSNVRFNNIRGTS----ANKIPCQNIGIGNINWVYNGVNVKVEGPET-TSLCSNVKP 237
+VK SNV F NI GT+ A KI C G+ V + +++K+ G T TS C+NV+P
Sbjct: 332 KVKISNVSFKNIIGTTSTAEALKIVCAK-GLHCDQVVLSDIDLKLSGKGTLTSHCANVQP 390
Query: 238 TLFGKQIPATCV 249
T+ P C
Sbjct: 391 TITRVPPPLACA 402
>gi|15236790|ref|NP_193552.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|7268611|emb|CAB78820.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332658607|gb|AEE84007.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 414
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 137/258 (53%), Gaps = 56/258 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S++F +N + + I SV+S++FHI ++ C + K L ITA +DSPNT+GIHI S+
Sbjct: 156 SLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNV 215
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
S S IATGDDCVS+ GHGISVGSLG+ N+++V GL V++C
Sbjct: 216 YFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKI 275
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
+GT NI+ NNV NPI+IDQ YCP++ C VPS+V+
Sbjct: 276 SGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVEL 335
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVN-----VKVEGPET-TS 230
S + F NIRGTS++ + PC+ + + N++ + + G E +S
Sbjct: 336 SEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSSNRGNEAVSS 395
Query: 231 LCSNVKPTLFGKQIPATC 248
C NV+ G QIP C
Sbjct: 396 SCRNVRANYIGTQIPPPC 413
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFN 51
+ +V+ FGA A+ +D +KAF AW +AC +++P G++ S+RF+
Sbjct: 34 LVDVRSFGARANDHRDHTKAFVAAWDKACKSSSSSVNLIIPRGEFSVGSLRFS 86
>gi|297842619|ref|XP_002889191.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335032|gb|EFH65450.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 98/254 (38%), Positives = 135/254 (53%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++ F F+ S ++ IKS++S+ H N + ++I A DSPNT+GI IGSSN
Sbjct: 155 MNMGFQFVRFSRLSRIKSINSKMGHFNFFAVQYFDITRVRIMAPGDSPNTDGIKIGSSNH 214
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I H I TGDDC+++ GHGISVGSLGK ++ V GLTVR+
Sbjct: 215 MKIHHVDIGTGDDCIAILSGTTNLDIYNVKCGPGHGISVGSLGKFKGEKSVQGLTVRDSI 274
Query: 150 FTGT---------------NIVTN---------NVENPIVIDQLYCPYNKCNIKVPSQVK 185
F GT N+V+N NVENPI IDQ YCP C++K SQ++
Sbjct: 275 FNGTSNGVRIKTWASPGSPNLVSNFLYKNLQMINVENPINIDQRYCPNPPCSLKSFSQIQ 334
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+V+FNNI GTS NK +PC+N+ + N+N V+ G +GP SLC NV
Sbjct: 335 IKDVKFNNIWGTSTNKVAVKLQCSKNVPCKNVELFNVNLVHRG----RDGP-AISLCENV 389
Query: 236 KPTLFGKQIPATCV 249
GK P +C+
Sbjct: 390 AGWTRGKISPPSCI 403
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
VF+V+ +GA DG D++ AF AW+EAC W G V VP G + +L T TG
Sbjct: 34 VFDVRSYGARGDGKTDNAIAFTKAWKEACQWKGYPR-VYVPFGTF------YLGAVTFTG 86
>gi|413943665|gb|AFW76314.1| hypothetical protein ZEAMMB73_313945 [Zea mays]
Length = 426
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 148/289 (51%), Gaps = 59/289 (20%)
Query: 15 KDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINIL 74
K D + T C + S ++V ++ SI+ + ++TITG+ S+DS++FH+ ++
Sbjct: 143 KRDCRLLPTVSSATCATILLHSDIIVVQRRHQSIKLGLVRNATITGVTSLDSKFFHVAVV 202
Query: 75 GCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------------ 122
G +++++ + I A SPNT+G+HI S+ ++ S +ATGDDCVS+
Sbjct: 203 GSQDVRIHGVSIRAPRSSPNTDGVHIQGSSNVRVTDSAVATGDDCVSVGPGSSDVLVSGV 262
Query: 123 ----GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------- 153
GHGISVGSLG+ + +V L V NCT GT
Sbjct: 263 ACGPGHGISVGSLGRYPGEGDVRRLRVANCTVAGTSNGVRIKTWRGGSWPPTAVAGLVFE 322
Query: 154 NIVTNNVENPIVIDQLYCPYNKC--NIKVPSQVKTSNVRFNNIRGTSANKI--------- 202
+IV V NPI+IDQ YCPY C + + PS V+ S+V+F NIRG SA K+
Sbjct: 323 DIVMRKVRNPIIIDQEYCPYPSCRESEQRPSAVRISDVKFRNIRGESATKVAVKLSCSEA 382
Query: 203 -PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQ-IPATCV 249
PC+ + + +I+ Y VK G T S C++V + G +P +C+
Sbjct: 383 SPCRELELRDIDLRY----VK-RGVATQSRCAHVAGGVVGGTLVPPSCI 426
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV DFGAVADG DDS+AF AW EAC G + AV+VP G YL
Sbjct: 29 VFNVSDFGAVADGRTDDSEAFLRAWTEACATPG-RPAVVVPRGDYL 73
>gi|2832691|emb|CAA16789.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 362
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 137/258 (53%), Gaps = 56/258 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S++F +N + + I SV+S++FHI ++ C + K L ITA +DSPNT+GIHI S+
Sbjct: 104 SLKFVGMNRTVVRRISSVNSKFFHIALVECRDFKGTRLNITAPSDSPNTDGIHIERSSNV 163
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
S S IATGDDCVS+ GHGISVGSLG+ N+++V GL V++C
Sbjct: 164 YFSRSHIATGDDCVSIGQGNSQITITSIKCGPGHGISVGSLGRYPNEKDVNGLVVKDCKI 223
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
+GT NI+ NNV NPI+IDQ YCP++ C VPS+V+
Sbjct: 224 SGTTNGIRIKTWANSPGLSAATNMTFENIIMNNVTNPIIIDQSYCPFSSCISNVPSKVEL 283
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVN-----VKVEGPET-TS 230
S + F NIRGTS++ + PC+ + + N++ + + G E +S
Sbjct: 284 SEIYFKNIRGTSSSLVAVQLHCSRGMPCKKVYLENVHLDLSSSDGGRKQSSNRGNEAVSS 343
Query: 231 LCSNVKPTLFGKQIPATC 248
C NV+ G QIP C
Sbjct: 344 SCRNVRANYIGTQIPPPC 361
>gi|34223515|gb|AAQ63000.1| oil palm polygalacturonase allergen PEST643 [Elaeis guineensis]
Length = 433
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 133/250 (53%), Gaps = 54/250 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+R NF+ +T+ GI VDS+ F + I G N++++ +KI A ++PNT+GIHIG+S
Sbjct: 187 LRLNFVARATVRGISVVDSKSFQMTIFGSNNVRIHRIKIIAPEEAPNTDGIHIGNSTNVR 246
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+ S I TGDDC+S+ GHGIS+GSLG+ N+ +V G+TV+NCT T
Sbjct: 247 ITDSEIGTGDDCISVGPGSRQILVSGVSCGPGHGISIGSLGRYHNEPDVSGVTVKNCTLT 306
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
GT N+V N V+NPI++DQ YCP C PS V+ SN
Sbjct: 307 GTTNGLRVKTWQNSESSRASDFHFENVVMNGVQNPIIVDQEYCPVGNCEKGAPSLVEISN 366
Query: 189 VRFNNIRGTSANKIP----------CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F NIRGTSA+++ C+N+ + +I+ + V P + + C + T
Sbjct: 367 VTFQNIRGTSASRMAVHLFCSKTVNCKNVILQDIDLKF----VDANSP-SLAQCYYAQGT 421
Query: 239 LFGKQIPATC 248
G P +C
Sbjct: 422 AAGYMNPPSC 431
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRF----NFLN 54
FNVK FGA ADG DDS AF AW AC +G K +++P G+YL IRF N L
Sbjct: 61 AFNVKKFGAAADGKSDDSAAFLKAWETACPLEGRKK-IVIPRGEYLVNPIRFEGPCNGLM 119
Query: 55 DSTITGI 61
+ ++G+
Sbjct: 120 EVLLSGV 126
>gi|242093572|ref|XP_002437276.1| hypothetical protein SORBIDRAFT_10g024020 [Sorghum bicolor]
gi|241915499|gb|EER88643.1| hypothetical protein SORBIDRAFT_10g024020 [Sorghum bicolor]
Length = 404
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 137/256 (53%), Gaps = 58/256 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+ + ++TITG+ S+DS++FH+ ++G +++ ++ + I A SPNT+G+HI S+
Sbjct: 154 SIKLGLVRNATITGVTSLDSKFFHVTVVGSHDVAIHRVSIRAPRSSPNTDGVHIQGSSNV 213
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ S +ATGDDCVS+ GHGISVGSLG+ +E+V L V NCT
Sbjct: 214 RVTDSAVATGDDCVSVGPGASDVVVSGVSCGPGHGISVGSLGRYPGEEDVRRLRVANCTL 273
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKC--NIKVPSQV 184
GT +IV V NPI+IDQ YCPY C + + PS V
Sbjct: 274 AGTSNGVRIKTWRGGTWPTAVTGLVFEDIVMRKVHNPIIIDQEYCPYASCRESEQRPSAV 333
Query: 185 KTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+ S+V+F NIRG SA K+ PC+ + + +I+ Y VK G T S C++
Sbjct: 334 RISDVKFRNIRGESATKVAVKLSCSEASPCRELELRDIDLRY----VK-RGVATQSRCAH 388
Query: 235 VKPTLFGKQ-IPATCV 249
V + G +P +C+
Sbjct: 389 VAGGVVGGTLVPPSCI 404
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV DFGAVADG DDS+AF AW +AC G ++AV+VP G YL
Sbjct: 31 VFNVSDFGAVADGRTDDSEAFLRAWTKACATPG-RAAVVVPRGDYL 75
>gi|359477241|ref|XP_002270999.2| PREDICTED: exopolygalacturonase clone GBGE184-like [Vitis vinifera]
Length = 388
Score = 149 bits (377), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 148/292 (50%), Gaps = 77/292 (26%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY----------LSIRF 50
+F+V +GAV DG ++ AF AW +ACN G KS +LVP G + L+ F
Sbjct: 70 IFDVTMYGAVGDGKTENGMAFLAAWDDACNHPG-KSTLLVPNGTFFIGPISFIGPLTQVF 128
Query: 51 NFLNDST---------------ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNT 95
NF+ S I+ I + + FH+ I+ N+ ++ + ITA +SPNT
Sbjct: 129 NFIGISKWLMQSIILVNVTNGNISNITLKNGKGFHMGIINSDNVTVHGVNITAPWNSPNT 188
Query: 96 EGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEE 139
+G+HIG S I+ S I GDDCVS+ GHGISVGSLGK +++
Sbjct: 189 DGVHIGYSTNIHITSSTIGVGDDCVSIGPGSINITVFNTKCGPGHGISVGSLGKYSAEKD 248
Query: 140 VVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKC 176
VVG+ V+NCT GT +IV NV NPI+IDQ YCP++ C
Sbjct: 249 VVGVRVKNCTINGTQNGVRIKTWPGSPASKASSFWFEDIVMINVSNPIIIDQEYCPWSTC 308
Query: 177 -NIKV-PSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVY 216
+ KV PS VK S++ F NIRGT K +PC++I + NIN +
Sbjct: 309 TSSKVSPSLVKLSDIHFTNIRGTFNTKSAVALMCSSSVPCEDIQLLNINLTH 360
>gi|125556041|gb|EAZ01647.1| hypothetical protein OsI_23683 [Oryza sativa Indica Group]
Length = 415
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 143/282 (50%), Gaps = 72/282 (25%)
Query: 29 CNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 88
C W K + PP SI+ + ++TITG+ S+DS++FH+ I+G ++++++ + I A
Sbjct: 145 CPW---KPDCVPPPS---SIKLGSVRNATITGVTSLDSKFFHVTIVGSHDVEVSHVSIRA 198
Query: 89 HADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLG 132
DSPNT+G+HI S G I+ + +ATGDDCVS+ GHGISVGSLG
Sbjct: 199 PRDSPNTDGVHIQGSTGVRITDTAVATGDDCVSVGPGSADVTVSGVSCGPGHGISVGSLG 258
Query: 133 KGINDEEVVGLTVRNCTFTGT-------------------------------NIVTNNVE 161
+ + +V L V NCT GT +IV V
Sbjct: 259 RSPGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRSSAAAAAAAAVSGLVFEDIVMRRVR 318
Query: 162 NPIVIDQLYCPYNKCN---IKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIG 208
NPI+IDQ YCPY C+ + PS V+ S+V+F NIRG SA ++ PC+ +
Sbjct: 319 NPIIIDQEYCPYLSCHHQSERRPSVVRISDVKFRNIRGVSATQVAVKLSCSAASPCRGVE 378
Query: 209 IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQ-IPATCV 249
+ +I+ Y V+ G T S C+NV + G +P C+
Sbjct: 379 LRDIDLRY----VR-RGVATVSRCANVAGGVAGGTLVPPPCI 415
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
VF+V+DFGAVADG D+SKAFE AW +AC G ++AV+VP
Sbjct: 26 VFDVRDFGAVADGQTDNSKAFERAWAKACAAPG-RAAVVVP 65
>gi|449454426|ref|XP_004144956.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449471315|ref|XP_004153273.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449500188|ref|XP_004161029.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 406
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 122/216 (56%), Gaps = 50/216 (23%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
++F LN++ + I S++S++FH+ ++ C ++LKI+A +SPNT+GIHI S+
Sbjct: 168 LKFVALNNTVVQHITSLNSKFFHLALVQCKRFVGSELKISAPENSPNTDGIHIDRSSNIH 227
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
S S I TGDDC+S+ GHGISVGSLG+ N+ +V GL V+NC+ T
Sbjct: 228 FSLSHIQTGDDCISIGQGNSQVTISSVNCGPGHGISVGSLGRYRNEGDVSGLVVKNCSLT 287
Query: 152 GT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
GT NI NNV NPI+IDQ YCP+ C+ K PS VK S
Sbjct: 288 GTANGIRIKTWPNSPGSSSATNMTFENITMNNVSNPIIIDQSYCPFGFCSFKAPSLVKLS 347
Query: 188 NVRFNNIRGTSANKI----------PCQNIGIGNIN 213
++ F NIRGTS++K+ PCQN+ + N++
Sbjct: 348 DIYFKNIRGTSSSKVAVALECSKGFPCQNVNLENVH 383
>gi|125597839|gb|EAZ37619.1| hypothetical protein OsJ_21954 [Oryza sativa Japonica Group]
Length = 415
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 143/282 (50%), Gaps = 72/282 (25%)
Query: 29 CNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 88
C W K + PP SI+ + ++TITG+ S+DS++FH+ I+G ++++++ + I A
Sbjct: 145 CPW---KPDCVPPPS---SIKLGSVRNATITGVTSLDSKFFHVTIVGSHDVEVSHVSIRA 198
Query: 89 HADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLG 132
DSPNT+G+HI S G I+ + +ATGDDCVS+ GHGISVGSLG
Sbjct: 199 PRDSPNTDGVHIQGSTGVRITDTAVATGDDCVSVGPGSADVTVSGVSCGPGHGISVGSLG 258
Query: 133 KGINDEEVVGLTVRNCTFTGT-------------------------------NIVTNNVE 161
+ + +V L V NCT GT +IV V
Sbjct: 259 RSPGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRSSAVAAAAAAVSGLVFEDIVMRRVR 318
Query: 162 NPIVIDQLYCPYNKCN---IKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIG 208
NPI+IDQ YCPY C+ + PS V+ S+V+F NIRG SA ++ PC+ +
Sbjct: 319 NPIIIDQEYCPYLSCHHQSERRPSVVRISDVKFRNIRGVSATQVAVKLSCSAASPCRGVE 378
Query: 209 IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQ-IPATCV 249
+ +I+ Y V+ G T S C+NV + G +P C+
Sbjct: 379 LRDIDLRY----VR-RGVATVSRCANVAGGVAGGTLVPPPCI 415
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
VF+V+DFGAVADG D+SKAFE AW +AC G ++AV+VP
Sbjct: 26 VFDVRDFGAVADGQTDNSKAFERAWAKACAAPG-RAAVVVP 65
>gi|302143488|emb|CBI22049.3| unnamed protein product [Vitis vinifera]
Length = 345
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 153/313 (48%), Gaps = 76/313 (24%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL----------SIRF 50
+F+V +GA DG D S+A AW +AC+ + S V++P G Y
Sbjct: 27 IFDVTKYGARTDGNSDISQALLKAWGDACS-SPVASTVMIPDGTYALGQIIIAGPCKAPI 85
Query: 51 NFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSS------- 103
NF+ T+ + VD+ F +++ ++ I G+
Sbjct: 86 NFVVQGTV--MAPVDTSRFRAEAGWITFQQIDQFTLSGDGVFDGQGKIVWGTKCLSSAYC 143
Query: 104 NGSEISHSVIA--TGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTV 145
N I+ + I+ TGDDCVS+G HGISVGSLGK N+E VVG++V
Sbjct: 144 NQLPINTNTISFETGDDCVSIGDGSEQINIQRVTCGPGHGISVGSLGKYPNEEPVVGISV 203
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+NCT T T +IV NNV NPI+IDQ YCP+N+CN+K PS
Sbjct: 204 KNCTLTNTQNGVRVKTWPASHQGTASEMHFEDIVMNNVGNPIIIDQEYCPHNQCNLKSPS 263
Query: 183 QVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
++K SNV F NIRGT++ + +PCQ++ +G+IN YNG +GP S C
Sbjct: 264 RIKISNVSFRNIRGTTSTQVAVKLICSQGVPCQDVELGDINLEYNG----NDGP-AMSQC 318
Query: 233 SNVKPTLFGKQIP 245
N+KP + G Q+P
Sbjct: 319 KNIKPNVLGAQLP 331
>gi|115468922|ref|NP_001058060.1| Os06g0611400 [Oryza sativa Japonica Group]
gi|51090901|dbj|BAD35506.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091973|dbj|BAD35502.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113596100|dbj|BAF19974.1| Os06g0611400 [Oryza sativa Japonica Group]
Length = 419
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 143/282 (50%), Gaps = 72/282 (25%)
Query: 29 CNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 88
C W K + PP SI+ + ++TITG+ S+DS++FH+ I+G ++++++ + I A
Sbjct: 149 CPW---KPDCVPPPS---SIKLGSVRNATITGVTSLDSKFFHVTIVGSHDVEVSHVSIRA 202
Query: 89 HADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLG 132
DSPNT+G+HI S G I+ + +ATGDDCVS+ GHGISVGSLG
Sbjct: 203 PRDSPNTDGVHIQGSTGVRITDTAVATGDDCVSVGPGSADVTVSGVSCGPGHGISVGSLG 262
Query: 133 KGINDEEVVGLTVRNCTFTGT-------------------------------NIVTNNVE 161
+ + +V L V NCT GT +IV V
Sbjct: 263 RSPGEADVRRLRVSNCTIAGTANGVRIKTWRGGQRSSAAAAAAAAVSGLVFEDIVMRRVR 322
Query: 162 NPIVIDQLYCPYNKCN---IKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIG 208
NPI+IDQ YCPY C+ + PS V+ S+V+F NIRG SA ++ PC+ +
Sbjct: 323 NPIIIDQEYCPYLSCHHQSERRPSVVRISDVKFRNIRGVSATQVAVKLSCSAASPCRGVE 382
Query: 209 IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQ-IPATCV 249
+ +I+ Y V+ G T S C+NV + G +P C+
Sbjct: 383 LRDIDLRY----VR-RGVATVSRCANVAGGVAGGTLVPPPCI 419
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 1/41 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
VF+V+DFGAVADG D+SKAFE AW +AC G ++AV+VP
Sbjct: 30 VFDVRDFGAVADGQTDNSKAFERAWAKACAAPG-RAAVVVP 69
>gi|356498930|ref|XP_003518299.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 387
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 130/247 (52%), Gaps = 56/247 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ F F+N+ I I DS+YFH+NI GC N+ + ++++ +PNT+ IHIG
Sbjct: 141 MNFGFGFVNNLIIMDITLKDSKYFHVNIFGCKNITFTNFRVSSTTYNPNTDRIHIGKLTQ 200
Query: 106 SEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT 149
+I++S I TGDDC+SLG HGISVGSL K N++ V L V+NCT
Sbjct: 201 VKITNSQIGTGDDCISLGDGSKEVTILNVTCGPEHGISVGSLEKYSNEDSVEDLIVKNCT 260
Query: 150 FTGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
TN I+ NV NPI+I+Q Y P+N+C+ + PS++K
Sbjct: 261 LKNTNNGLRIKTWPSTLITSLASDXHFEDIIMINVSNPIIINQEYXPWNQCSKQSPSKIK 320
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V F NIRGTSA + +PC+ + + +IN +N + + T+ C+NV
Sbjct: 321 ISKVTFKNIRGTSATQERITLICSSGVPCETVELSDINLRFNDIIL------ATAKCANV 374
Query: 236 KPTLFGK 242
KP GK
Sbjct: 375 KPNFEGK 381
>gi|449433417|ref|XP_004134494.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449503877|ref|XP_004162214.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 424
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 135/253 (53%), Gaps = 53/253 (20%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++ N + + GI SV+S+ FH+ + C N++L L +TA DSPNT+GIH+ SN
Sbjct: 174 VNLKLNNITHGLVKGISSVNSKGFHMFVTNCENVRLRKLHLTAPEDSPNTDGIHLSRSNN 233
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+IS SVIATGDDC+SL GHGISVGSLGK N+E+V G+ V+NCT
Sbjct: 234 IKISRSVIATGDDCISLGRGSMNVAINKITCGPGHGISVGSLGKYPNEEDVRGIVVKNCT 293
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLY-CPYNKCNIKVPSQVK 185
T +I NV+NPI+IDQ Y C C + PS+VK
Sbjct: 294 LLSTDNGLRIKTWPDSPPSAASGILFQDINMVNVKNPILIDQEYSCSKTNCQ-RPPSRVK 352
Query: 186 TSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S+V + N++G+S + + PCQNI + NIN Y+G K E P + CSN
Sbjct: 353 ISDVHYINVKGSSISPVAVQLKCSKQFPCQNIEMFNINLKYSGPPNK-ELPFSAK-CSNA 410
Query: 236 KPTLFGKQIPATC 248
K G Q P C
Sbjct: 411 KVGYRGLQFPPPC 423
>gi|297744463|emb|CBI37725.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 147 bits (371), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 126/222 (56%), Gaps = 27/222 (12%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
++F +N + + GI SV+S++FHI ++ C N K + +KI+A +SPNT+GIHI S+G
Sbjct: 174 LKFIAMNKTVVRGITSVNSKFFHIALVECNNFKGSQIKISAPENSPNTDGIHIERSSGVY 233
Query: 108 ISHSVIATGDDCVSLGHG---ISVGSLGKGINDEEVVGLT-------VRNCTFTGTNIVT 157
S S+I TGDDC+S+G G +++ S+ I D + N TF NIV
Sbjct: 234 FSRSLIGTGDDCISVGQGNSQVTITSITSVIFDIWIKTWANSPDSSEATNMTF--ENIVM 291
Query: 158 NNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNI 207
NNV NPI+IDQ YCP+ C K PS+VK S++ F NIRGTS + + PCQNI
Sbjct: 292 NNVTNPIIIDQAYCPFMSCASKAPSRVKLSDIYFKNIRGTSLSAVAVTLKCSRGTPCQNI 351
Query: 208 GIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ +++ +++ TS C NV+ G QIP C
Sbjct: 352 YLQDVH-----LDLSSGEKHATSSCRNVRVKYSGTQIPPPCA 388
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+FNV+ FGA ADG DD +AF AW+EAC G K +L+P G Y+
Sbjct: 52 LFNVRSFGAQADGHTDDRRAFTAAWKEACASTG-KVKLLIPKGTYM 96
>gi|26450968|dbj|BAC42591.1| putative polygalacturonase [Arabidopsis thaliana]
gi|28950771|gb|AAO63309.1| At3g07830 [Arabidopsis thaliana]
Length = 225
Score = 147 bits (370), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/220 (40%), Positives = 120/220 (54%), Gaps = 55/220 (25%)
Query: 79 LKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG--------------- 123
+ +++KI A A+SPNT+GIH+G S G I +S I+TGDDCVS+G
Sbjct: 1 MTFDNVKIMAPAESPNTDGIHLGRSVGVSIINSRISTGDDCVSVGDGMVNLLVKNVVCGP 60
Query: 124 -HGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTN 158
HGISVGSLG+ ++++V G+ V NCT T NI+
Sbjct: 61 GHGISVGSLGRYGHEQDVSGIRVINCTLQETDNGLRIKTWPSAACSTTASNIHFENIILR 120
Query: 159 NVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIG 208
NV NPI+IDQ YCP+N+CN + S +K +N+ F IRGTS NK PC+N+
Sbjct: 121 NVSNPILIDQEYCPWNQCNKQKSSSIKLANISFRRIRGTSGNKDAVKLLCSKGYPCENVQ 180
Query: 209 IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
+G+IN Y G +GP T +CSNV+P L G Q P C
Sbjct: 181 VGDINIQYTG----ADGP-ATFMCSNVRPKLVGTQFPKAC 215
>gi|224106375|ref|XP_002314146.1| predicted protein [Populus trichocarpa]
gi|222850554|gb|EEE88101.1| predicted protein [Populus trichocarpa]
Length = 395
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 138/255 (54%), Gaps = 57/255 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+R F+ + + I+S++S+ H++I NL + ++K++A DSPNT+GI I SS
Sbjct: 142 ISLRLEFIRNGKLQNIRSINSQNAHVSIFASSNLNITNVKLSAPQDSPNTDGIKISSSEE 201
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGI---NDEEVVGLTVR 146
I+ + I+TGDDCV++ GHGISVGS+G N + VVGL V
Sbjct: 202 IRITRTSISTGDDCVAILNGSKNTHISQVFCGPGHGISVGSMGGNTLIDNKDIVVGLAVT 261
Query: 147 NCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ 183
N TFT T +I+ N+VE+PI+IDQ YCP + C+ K S+
Sbjct: 262 NSTFTNTSNGLRIKTWASRYEGLASGFTYEDIIMNDVEHPIIIDQQYCPSSSCDSKTASR 321
Query: 184 VKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
++ ++ ++NIRGTS +K +PC+NI + +I VY G EGP +S+CS
Sbjct: 322 IQIRDITYSNIRGTSKSKAAVTLNCSSIVPCKNIVLKDIRLVYTG----NEGP-ASSICS 376
Query: 234 NVKPTLFGKQIPATC 248
NV +G Q P C
Sbjct: 377 NVHGYSYGLQNPPPC 391
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRF 50
+FNVK +GA+ DG ++SKAF AW+ AC W+G K+ VLVP G YL S++F
Sbjct: 26 IFNVKKYGAIPDGKTENSKAFLEAWKNACKWNG-KAVVLVPAGTYLLDSVKF 76
>gi|27902548|gb|AAO24261.1| putative pollen polygalacturonase [Turnera subulata]
Length = 382
Score = 146 bits (368), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 126/245 (51%), Gaps = 54/245 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
L+ RF L + I + S DS+ FH+N++ C N+ + I A A+S NT+GIH+G S G
Sbjct: 142 LNFRFTSLKHALIKDLTSKDSKNFHVNVINCENVTFQNFVIDAPAESLNTDGIHMGRSKG 201
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I S I TGDDC+S+ GHGIS+GSLG+ N++ V G+ V+NC
Sbjct: 202 IKIIDSKIGTGDDCISIGDGTEQVTVTGVTCGPGHGISIGSLGRYDNEQPVRGVLVKNCI 261
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I NV NP++IDQ YCP+N+C PS+VK
Sbjct: 262 LKNTDNGVRIKSWPAMKGGEASDIHFEDITMENVTNPVIIDQEYCPWNQCTKDAPSKVKI 321
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SNV F NI+GT+ ++ +PC+ + + I+ Y G +GP S C N K
Sbjct: 322 SNVSFKNIKGTTNTPEAVKIICSSALPCEQVQLNGIDLKYTG----TQGP-AKSECKNAK 376
Query: 237 PTLFG 241
T+ G
Sbjct: 377 LTVTG 381
>gi|357117667|ref|XP_003560585.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 412
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 137/261 (52%), Gaps = 62/261 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SI+ + + TIT + S+DS++FH+ I+G ++ ++ + I A DSPNT+G+HI S+
Sbjct: 157 VSIKLGRVRNVTITEVTSLDSKFFHVIIIGSQDVAIHRVTIRAPRDSPNTDGVHIQGSSN 216
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+ + +ATGDDCVS+ GHGISVGSLG+ +E+V GL V NCT
Sbjct: 217 VRITDTAVATGDDCVSVGPGSADITVSGVSCGPGHGISVGSLGRHPGEEDVRGLRVSNCT 276
Query: 150 FTGT-------------------------NIVTNNVENPIVIDQLYCPYNKCNIK----- 179
GT +IV V NPI+IDQ YCPY+ + +
Sbjct: 277 LAGTANGVRIKTWRGGLRPAAGVSGLVFEDIVMRKVRNPIIIDQEYCPYSSSSCRHESAL 336
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
+PS VK S+V+F NIRG SA ++ PC + + +I+ Y VK G T
Sbjct: 337 LPSVVKISDVKFKNIRGVSATQVAVKLSCSGASPCHGLELRDIDLRY----VK-RGVATE 391
Query: 230 SLCSNVKPTLFGKQ-IPATCV 249
S C+NV + G +P +C+
Sbjct: 392 SRCANVAGGVAGGTLVPPSCI 412
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V DFGAVADG DDSKAF AW +AC G + AV+VP G+Y
Sbjct: 35 VFDVTDFGAVADGQTDDSKAFLRAWMKACAAPG-RPAVVVPKGEY 78
>gi|359485805|ref|XP_003633338.1| PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Vitis
vinifera]
Length = 345
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/240 (38%), Positives = 128/240 (53%), Gaps = 54/240 (22%)
Query: 22 ETAW-REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 80
TAW + C G + +LV ++ F + +S I S++S+ FH++IL C+N+
Sbjct: 110 HTAWGQNNCARTGTCNLLLV------NLCFTKVTNSIIXNTTSLNSKLFHMDILNCWNMT 163
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
L + I A DS NT+GIH+G S G IS ++I TGDD +S+ GH
Sbjct: 164 LQYVTINATGDSLNTDGIHMGRSTGVNISDAIIKTGDDSLSIGDGSQHINVEKVTCGPGH 223
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVE 161
GISVGSLGK N+E VVG+TV+NCT T +I+ NNV
Sbjct: 224 GISVGSLGKYHNEEPVVGVTVKNCTLINTMNGIRVKTWPDSPASVATDLHFEDIIMNNVG 283
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK--------IPCQNIGIGNIN 213
NPI+I+Q YCPY++C KVPSQVK S+V F I S + +PCQ + I +IN
Sbjct: 284 NPILINQEYCPYDQCQAKVPSQVKISDVSFQGICSMSGTQVAVVCSRGVPCQTVDISDIN 343
>gi|356528552|ref|XP_003532865.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 396
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 130/256 (50%), Gaps = 52/256 (20%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+ ++ F+F+ + + + S+DS+ H + GC N+ DL + + + NT+GI I +N
Sbjct: 133 FTTMDFDFITNGHVQNLHSIDSKGGHFIVFGCENMTFTDLTLKSPEHNRNTDGIKIAQTN 192
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
G I+ I TGDDCV++ GHGISVGSLGK + +V + V+NC
Sbjct: 193 GINITSVKIGTGDDCVAMISGTKNAWISNVVCGPGHGISVGSLGKNDGETDVEDIVVKNC 252
Query: 149 TFTGT-------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ 183
TF GT +IV N+V+NPIVIDQ YCP ++C++K S
Sbjct: 253 TFVGTSNGLRIKTWAAPLKKTLNASNFVYEDIVMNSVQNPIVIDQQYCPLHQCDLKEISH 312
Query: 184 VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
V+ SNV + NIRG+S I PCQ I + NIN GV K P + C
Sbjct: 313 VQISNVTYRNIRGSSETDIAVNFNCSKDKPCQKITLDNINLWRYGVRGKGR-PLLRNNCF 371
Query: 234 NVKPTLFGKQIPATCV 249
V+ +GKQ P +C+
Sbjct: 372 KVEGASYGKQTPPSCI 387
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF---LNDST 57
+FNV ++GA+ADG +D+S AF AW +AC W+G + VL+P G Y+ F NDS
Sbjct: 15 LFNVAEYGAIADGKEDNSVAFLKAWSDACKWNG-SATVLIPKGTYMLKSVIFKGPCNDSI 73
Query: 58 ITGIKSV 64
IK V
Sbjct: 74 TFQIKGV 80
>gi|226502008|ref|NP_001152243.1| polygalacturonase precursor [Zea mays]
gi|195654209|gb|ACG46572.1| polygalacturonase precursor [Zea mays]
gi|413943666|gb|AFW76315.1| polygalacturonase [Zea mays]
Length = 403
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/257 (35%), Positives = 136/257 (52%), Gaps = 59/257 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+ + ++TITG+ S+DS++FH+ ++G +++++ + I A SPNT+G+HI S+
Sbjct: 152 SIKLGLVRNATITGVTSLDSKFFHVAVVGSQDVRIHGVSIRAPRSSPNTDGVHIQGSSNV 211
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ S +ATGDDCVS+ GHGISVGSLG+ + +V L V NCT
Sbjct: 212 RVTDSAVATGDDCVSVGPGSSDVLVSGVACGPGHGISVGSLGRYPGEGDVRRLRVANCTV 271
Query: 151 TGT-------------------------NIVTNNVENPIVIDQLYCPYNKC--NIKVPSQ 183
GT +IV V NPI+IDQ YCPY C + + PS
Sbjct: 272 AGTSNGVRIKTWRGGSWPPTAVAGLVFEDIVMRKVRNPIIIDQEYCPYPSCRESEQRPSA 331
Query: 184 VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
V+ S+V+F NIRG SA K+ PC+ + + +I+ Y VK G T S C+
Sbjct: 332 VRISDVKFRNIRGESATKVAVKLSCSEASPCRELELRDIDLRY----VK-RGVATQSRCA 386
Query: 234 NVKPTLFGKQ-IPATCV 249
+V + G +P +C+
Sbjct: 387 HVAGGVVGGTLVPPSCI 403
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV DFGAVADG DDS+AF AW EAC G + AV+VP G YL
Sbjct: 29 VFNVSDFGAVADGRTDDSEAFLRAWTEACATPG-RPAVVVPRGDYL 73
>gi|225216942|gb|ACN85236.1| polygalacturonase precursor [Oryza minuta]
Length = 412
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 145/286 (50%), Gaps = 69/286 (24%)
Query: 26 REACNW---DGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
R A +W D + VPP SI+ + ++TITG+ S+DS++FH+ I G ++++++
Sbjct: 134 RGASSWHLNDCPRKPDCVPPPS--SIKLGRVRNATITGVTSLDSKFFHVTIAGSHDVEVS 191
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGI 126
+ I A DSPNT+G+HI S I+ + +ATGDDCVS+ GHGI
Sbjct: 192 HVIIRAPRDSPNTDGVHIQGSTNVRITDTAVATGDDCVSVGPGSADVTVSGVSCGPGHGI 251
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------------NIVT 157
SVGSLG+ + +V L V NCT GT +IV
Sbjct: 252 SVGSLGRSPGEADVRRLRVSNCTIAGTANGVRIKTWRGQRPPASSAAAAVSGLVFEDIVM 311
Query: 158 NNVENPIVIDQLYCPYNKCN---IKVPSQVKTSNVRFNNIRGTSANKI----------PC 204
V NPI+IDQ YCPY C+ + PS V+ S+V+F NIRG SA ++ PC
Sbjct: 312 RRVRNPIIIDQEYCPYLSCHHQSERRPSVVRISDVKFRNIRGVSATQVAVKLSCSAASPC 371
Query: 205 QNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGK-QIPATCV 249
+ + + +I+ Y V+ G T S C+NV + G +P +C+
Sbjct: 372 RGLELRDIDLRY----VR-RGVATVSRCANVAGGVAGGILVPPSCI 412
>gi|115475920|ref|NP_001061556.1| Os08g0327200 [Oryza sativa Japonica Group]
gi|38637195|dbj|BAD03446.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113623525|dbj|BAF23470.1| Os08g0327200 [Oryza sativa Japonica Group]
gi|215697618|dbj|BAG91612.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 407
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 132/255 (51%), Gaps = 56/255 (21%)
Query: 44 KYLSIRFNFLNDS--TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
K L F+N+ + + SV+S++FH+ +L C K++ +KI+A SPNT+GIHI
Sbjct: 158 KVLPTSVLFVNNKNMVVQNVASVNSKFFHMALLQCSGAKISGVKISAPESSPNTDGIHIE 217
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SNG I+ + IATGDDC+S+ GHG+SVGSLG+ + + +V + V
Sbjct: 218 RSNGVSIADTTIATGDDCISIGQGNDNIDVARVHCGPGHGMSVGSLGRYVGEGDVTRIHV 277
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
R+ TF GT N+V N+V+NPI+IDQ YCPY C K
Sbjct: 278 RDMTFHGTMNGVRIKTWENSPTKSNAAHMLFENLVMNDVQNPIIIDQKYCPYYNCEHKFV 337
Query: 182 SQVKTSNVRFNNIRGTSANK--------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
S V +V+F NI+GT+ + +PCQ + + +++ Y G V ++S C
Sbjct: 338 SGVTIKDVQFKNIKGTATTQVAVLLKCGVPCQGVVLQDVDLRYKGNGV------SSSKCE 391
Query: 234 NVKPTLFGKQIPATC 248
NV+ G Q P C
Sbjct: 392 NVRAKYAGFQNPKPC 406
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
FNV+++GA +G DDSKA TAW+ AC G + VL PPG Y
Sbjct: 39 FNVRNYGAKGNGQTDDSKALMTAWKAACAATGAVTLVL-PPGTY 81
>gi|356555276|ref|XP_003545960.1| PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like [Glycine
max]
Length = 379
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 156/323 (48%), Gaps = 85/323 (26%)
Query: 1 VFNVKDFGAVADGIKDDSKAFE------------------TAWREACNWDGIKSAVLVPP 42
+FNV ++GA+ DG +D+S F +A R+ C + +L
Sbjct: 57 LFNVAEYGAITDGKEDNSVNFRYIDQLNVNGVAGTLDGQGSATRQKCK-NNANCEIL--- 112
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
+ ++ F+F+ + + + S+DS+ H + GC N+ DL + + ++ NT+GI I
Sbjct: 113 --FTTMDFDFITNGHVQNLHSIDSKGGHFIVFGCENMTFTDLTLKSPENNHNTDGIKISQ 170
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
+NG I+ I TGDDCV++ GHGISVGSLGK + +V + V+
Sbjct: 171 TNGINITGVKIGTGDDCVAMISGTKNVRISNVVCGPGHGISVGSLGKNDGETDVEDIVVK 230
Query: 147 NCTFTGT-------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
NCTF GT +IV NNV+NP+VIDQ YCP ++C++K+
Sbjct: 231 NCTFVGTSNGLRIKTWAAPLKKNLKASKFVYEDIVMNNVQNPVVIDQQYCPLHQCDLKLV 290
Query: 182 ---SQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNIN-WVY--NGVNVKVEG 225
S V+ SNV NIRG+S + I PCQNI + NIN W Y NG +
Sbjct: 291 FGNSHVQISNVACRNIRGSSKSDIAVIFNCSKDKPCQNITMDNINLWGYSDNGKGRLL-- 348
Query: 226 PETTSLCSNVKPTLFGKQIPATC 248
+ C V +GKQ P +C
Sbjct: 349 --LRNYCFEVNGASYGKQSPPSC 369
>gi|296084984|emb|CBI28399.3| unnamed protein product [Vitis vinifera]
Length = 358
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 102/177 (57%), Gaps = 39/177 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RFNFL +S I I S DS+ FHIN+LGC N+ + ITA DS NT+GIHIG S G
Sbjct: 146 INLRFNFLTNSIIKDITSKDSKQFHINVLGCRNITFFQVAITAPEDSQNTDGIHIGRSRG 205
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+HS I TGDDCVS+ GHGISVGSLG N+ V+G+ V+NCT
Sbjct: 206 VNITHSTIQTGDDCVSIGDGSEQIDITKVNCGPGHGISVGSLGLYKNEAPVIGIRVKNCT 265
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ 183
+ T +IV NNV NPI+IDQ YCP+N+CN++ +
Sbjct: 266 LSDTTNGVRVKTWPSSPQGTATEMHFHDIVMNNVSNPIIIDQEYCPHNQCNLQTSTH 322
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
F+V +GA ADG D S+A TAW AC I S V++P G Y
Sbjct: 26 FDVTKYGAQADGKTDISQALLTAWEAACA-SPIASRVVIPAGIY 68
>gi|326491385|dbj|BAK05779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 412
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 135/259 (52%), Gaps = 60/259 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SI+ + + TIT + S++S++FH+ I+G ++ ++ + I A DSPNT+G+HI S+
Sbjct: 159 VSIKLGRVRNVTITAVTSLNSKFFHVIIIGSQDVSIHRVTIRAPRDSPNTDGVHIQGSSN 218
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+ + IATGDDCVS+ GHGISVGSLG+ +E+V GL V NCT
Sbjct: 219 VRITDTAIATGDDCVSVGPGSADITVSGVSCGPGHGISVGSLGRHPGEEDVRGLRVSNCT 278
Query: 150 FTGT-------------------------NIVTNNVENPIVIDQLYCPYNKCNIK---VP 181
GT +IV V NPI+IDQ YCPY+ + + P
Sbjct: 279 LAGTANGVRIKTWRGGLRPGSVVSGLVFEDIVMRKVRNPIIIDQEYCPYSSSSCRHESRP 338
Query: 182 SQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSL 231
S VK S+V+F NIRG SA ++ PC + + +I+ Y VK G T S
Sbjct: 339 SVVKISDVKFKNIRGVSATQVAVKLSCSGASPCHGLELRDIDLRY----VK-RGVATESQ 393
Query: 232 CSNVKPTLFGKQ-IPATCV 249
C NV + G +P +C+
Sbjct: 394 CENVDGGVAGGMLVPPSCI 412
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V DFGA+ADG DDSKAF AW +AC G ++AV++P G+Y
Sbjct: 37 VFDVMDFGAIADGETDDSKAFIRAWMKACASPG-RAAVVIPKGEY 80
>gi|449483282|ref|XP_004156544.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 403
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+++F+F+ +S + ++S+DS+ H + GC N+ + +++I+A DSPNT+GI IG+S+
Sbjct: 157 TMKFDFITNSKVHNLRSIDSKNNHFMLFGCSNINITNIRISAPGDSPNTDGIKIGTSDHI 216
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+I +S+I TGDDC+S+ GHGIS+GSLGK +E V+G+TV+NCTF
Sbjct: 217 DIRNSIIGTGDDCISMLSGSKNIYISNVVCGPGHGISIGSLGKYKEEENVMGITVKNCTF 276
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +I + V NPI+IDQ YCP + CN S+++ S
Sbjct: 277 KNTTDGVRIKTWATPLMGTAYNIYYEDIFMDGVANPIIIDQEYCPVSPCNHDESSRIQIS 336
Query: 188 NVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
V F NI G+S + + PC+NI + NIN + + NV S C +V
Sbjct: 337 YVTFKNIWGSSKSASAVTLRCSERKPCKNIVLDNINLI-SSPNVG----RLFSSCFHVHG 391
Query: 238 TLFGKQIPATCV 249
+G Q P +C+
Sbjct: 392 FSYGNQSPYSCL 403
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
FNV +GA+ DG D+SKAF AW +AC W G + V VP G +
Sbjct: 36 FNVVKYGAIPDGKTDNSKAFLKAWNDACEWKG-RGRVYVPKGTF 78
>gi|15220038|ref|NP_173158.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332191430|gb|AEE29551.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 402
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 162/375 (43%), Gaps = 131/375 (34%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDG--------------------------- 33
VF+V+ +GA DG D++ AF AW++AC W+G
Sbjct: 32 VFDVRSYGAKGDGKMDNTNAFTNAWKDACRWNGPSKMYIPLGTFYLGGVTFVGPCDGKIS 91
Query: 34 --IKSAVLVPPG-----KYLSIRFNFLNDSTITGIKSVD--------------------- 65
I +L PP K + I F ++N T+ G ++D
Sbjct: 92 FVIDGTLLAPPNNDDIKKEIWINFRYINYLTVFGDGTLDGQGKKSWSLIDCQKDNNCPKL 151
Query: 66 ---------------------SRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
S+ H N L + + + I A ++SPNT+GI I S+
Sbjct: 152 AINMGFDFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIALSS 211
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
+IS++ I+TGDDC+++ GHGIS+GSLGK +++ V GL VRN
Sbjct: 212 NMQISNTHISTGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMVRNS 271
Query: 149 TFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
FTGT N+ NVENPI IDQ YCPY C+ S +
Sbjct: 272 VFTGTTNGIRIKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPYPPCSNMGDSHI 331
Query: 185 KTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+ NV NI GTS NK+ PC+++ + +IN ++G V+GP ++LC N
Sbjct: 332 QIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHG----VDGP-ASALCEN 386
Query: 235 VKPTLFGKQIPATCV 249
V + GK +P C+
Sbjct: 387 VDGSATGKMVPPHCL 401
>gi|218200954|gb|EEC83381.1| hypothetical protein OsI_28796 [Oryza sativa Indica Group]
Length = 236
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 126/239 (52%), Gaps = 54/239 (22%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ + SV+S++FH+ +L C K++ +KI+A SPNT+GIHI SNG I+ + IATGD
Sbjct: 3 VQNVASVNSKFFHMALLQCSGAKISGVKISAPESSPNTDGIHIERSNGVSIADTTIATGD 62
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHG+SVGSLG+ + + +V + VR+ TF GT
Sbjct: 63 DCISIGQGNDNIDVARVHCGPGHGMSVGSLGRYVGEGDVTRIHVRDMTFHGTMNGVRIKT 122
Query: 154 ----------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT 197
N+V N+V+NPI+IDQ YCPY C K S V +V+F NI+GT
Sbjct: 123 WENSPTKSNAAHMLFENLVMNDVQNPIIIDQKYCPYYNCEHKFVSGVTIKDVQFKNIKGT 182
Query: 198 SANK--------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
+ + +PCQ + + +++ Y G V ++S C NV+ G Q P C
Sbjct: 183 ATTQVAVLLKCGVPCQGVVLQDVDLRYKGNGV------SSSKCENVRAKYAGFQNPKPC 235
>gi|15225803|ref|NP_180874.1| glycosyl hydrolase and polygalacturonase domain-containing protein
[Arabidopsis thaliana]
gi|2924778|gb|AAC04907.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330253698|gb|AEC08792.1| glycosyl hydrolase and polygalacturonase domain-containing protein
[Arabidopsis thaliana]
Length = 664
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 132/255 (51%), Gaps = 57/255 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++I F F+ S I G++S++S+ H N+ + + + ITA DSPNT+GI IG S+
Sbjct: 153 MNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSH 212
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I + I TGDDC+++ GHGISVGSLG+ ++ V GLTVRN
Sbjct: 213 MQIYNVTIGTGDDCIAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSI 272
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNI--KVPSQ 183
GT NI NV NPIVIDQ YCP+ +C+ K S
Sbjct: 273 INGTTDGLRIKTWAKSVSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPGKYASH 332
Query: 184 VKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
V+ +V++NNI GTS +K PCQ++ + NIN Y G + V T+LC
Sbjct: 333 VQIKDVKYNNIWGTSTSKEALKMQCSKTFPCQDVELSNINLHYVGRDGLV-----TALCE 387
Query: 234 NVKPTLFGKQIPATC 248
NV ++ GK +PA C
Sbjct: 388 NVGGSIRGKIVPANC 402
>gi|356565946|ref|XP_003551196.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 293
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 98/285 (34%), Positives = 142/285 (49%), Gaps = 56/285 (19%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY--------------L 46
VF++ + A +G + ++ + AW +AC I S V++P G Y +
Sbjct: 20 VFDISKYRATPNG--NITQTLKNAWHDAC-ASTIXSKVVIPRGIYKLKQIELKGPCVPPI 76
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
F+FLN I I S DS+ FH+N+LGC N+ + I A A S N IHIG S
Sbjct: 77 EFGFDFLNSMIIQDITSKDSKNFHVNVLGCNNITFTNFNIIAPATSLNRNEIHIGRSTQV 136
Query: 107 EISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++ IA GDDC+SLG HGISV GK N T+ + F
Sbjct: 137 NITNTNIAIGDDCISLGNGSKKINVLNVTCGPRHGISVXRFGKYPNGTT----TMIDMHF 192
Query: 151 TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------N 200
+V NV NPI+ID+ YCP+N+C + P ++K V F NI GTSA N
Sbjct: 193 KDIKMV--NVMNPIIIDKEYCPWNQCTNQSPKKIKIRKVTFKNIIGTSATQEGVVLVCSN 250
Query: 201 KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
+PC+++ + +I+ +NG+ T+ +NVKPT GK +P
Sbjct: 251 DVPCEDVVLSDIDLKFNGI-------IATAKLANVKPTTQGKSLP 288
>gi|225217043|gb|ACN85327.1| polygalacturonase precursor [Oryza brachyantha]
Length = 405
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 140/277 (50%), Gaps = 67/277 (24%)
Query: 29 CNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITA 88
C W K + PP SI+ + ++TI G+ S+DS++FH+ + G +++++ + I A
Sbjct: 140 CPW---KPDCIPPPS---SIKLARVRNATIDGVTSLDSKFFHVVVAGSHDVEIRHVSIRA 193
Query: 89 HADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLG 132
DSPNT+G+HI S+ ++ S + TGDDCVS+ GHGISVGSLG
Sbjct: 194 PGDSPNTDGVHIQGSSNVRVTDSAVGTGDDCVSVGPGSADVTVSGVSCGPGHGISVGSLG 253
Query: 133 KGINDEEVVGLTVRNCTFTGT--------------------------NIVTNNVENPIVI 166
+ + +V L V NCT GT +IV V NPI+I
Sbjct: 254 RRPGEADVRRLRVSNCTIAGTANGVRIKTWRGGPRPASSAASGLVFEDIVMRRVRNPIII 313
Query: 167 DQLYCPYNKCN---IKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNIN 213
DQ YCPY C+ + PS VK S+V+F NIRG SA ++ PC+ + + +I+
Sbjct: 314 DQEYCPYISCHHQSERPPSVVKISDVKFRNIRGVSATQVAVKLSCSAASPCRGLELRDID 373
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQ-IPATCV 249
Y V+ G T S C+NV + G +P +C+
Sbjct: 374 LRY----VR-RGVATVSRCANVAGGVTGGTLVPPSCI 405
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VF+V DFGAV DG D+SKAF AW EAC G + AV+VP G YL
Sbjct: 29 VFDVTDFGAVTDGETDNSKAFVRAWTEACAAAG-RPAVVVPSGDYL 73
>gi|356532547|ref|XP_003534833.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Glycine max]
Length = 351
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/254 (38%), Positives = 137/254 (53%), Gaps = 60/254 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI F+ + + I IKSVD + FH+ + C N++L LK+TA A SPNT+GIHI +S
Sbjct: 107 SIYFHNVRNGIIQNIKSVDPKGFHLFVTSCANIRLRLLKLTAPATSPNTDGIHISNSIDV 166
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++S ++I TGDDCVS+ GHGIS+GSLGK ++EV + V+NCT
Sbjct: 167 KLSKNIIETGDDCVSMIQGVNNVTINKLKCGPGHGISIGSLGKYPEEQEVKDIRVKNCTM 226
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLY-CPYNKCNIKVPSQVKT 186
GT +IV + V+NPI+IDQ Y C C K PS V
Sbjct: 227 VGTTNGLRIKTWPDKYPGAASDITFGDIVMDKVKNPIIIDQEYECEPANCK-KKPSLVNI 285
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETT-SLCSNV 235
+V F+NIRGT+ + + PCQ+I + NI+ +N+ GP+ + S C+N+
Sbjct: 286 KDVVFSNIRGTTISPIAVDLRCSKQFPCQDIKLQNID-----LNL---GPKPSGSRCANI 337
Query: 236 KPTLFGKQIPATCV 249
KP G Q PA C+
Sbjct: 338 KPIYTGVQRPAACL 351
>gi|449449709|ref|XP_004142607.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 341
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 110/181 (60%), Gaps = 40/181 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++ NF+ +S +TGI S+DS+ FHIN+LGC NL + + ITA +SPNT+GIH+ SS
Sbjct: 160 MNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQ 219
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ IATGDDC+S+ GHGIS+GSLGK ++EVVG+TV+ C
Sbjct: 220 INILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCK 279
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
TGT +I +NV NPI+IDQ YCP+N+CN KV ++++
Sbjct: 280 LTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRKVCAKIR 339
Query: 186 T 186
+
Sbjct: 340 S 340
>gi|22330722|ref|NP_177961.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332197980|gb|AEE36101.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 404
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 135/254 (53%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++ F F+ S +T IKS++S+ H+N + + + I A DSPNT+GI IGSSN
Sbjct: 155 MNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNH 214
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I H IATGDDC+++ GHGISVGSLGK ++ V GL VRN
Sbjct: 215 MKIHHVDIATGDDCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSI 274
Query: 150 FTGT---------------NIVTN---------NVENPIVIDQLYCPYNKCNIKVPSQVK 185
F GT N+V+N +V++PI IDQ YCP C+ + S+++
Sbjct: 275 FNGTSNGVRIKTWPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPCSFQSFSKIQ 334
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+V+F NI GTS K +PC+N+ + NIN V+ G +GP TS+C NV
Sbjct: 335 IRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRG----RDGP-ATSVCENV 389
Query: 236 KPTLFGKQIPATCV 249
+ GK P +C+
Sbjct: 390 GGWIGGKISPPSCI 403
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V+ +GA DG D++ AF AW++AC W G+ V +P G +
Sbjct: 34 VFDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLPR-VYIPFGTF 77
>gi|242078937|ref|XP_002444237.1| hypothetical protein SORBIDRAFT_07g016970 [Sorghum bicolor]
gi|241940587|gb|EES13732.1| hypothetical protein SORBIDRAFT_07g016970 [Sorghum bicolor]
Length = 391
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 134/255 (52%), Gaps = 56/255 (21%)
Query: 44 KYLSIRFNFLND--STITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
K L F+N+ + + + SV+ ++FH+ +L N++++ LKI+A ++SPNT+GIHI
Sbjct: 142 KVLPTSVLFVNNQNTVVRDVTSVNPKFFHMALLTVKNIRMSGLKISAPSNSPNTDGIHIE 201
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G +I+ + I+TGDDC+S+ GHG+SVGSLG+ ++ +V + V
Sbjct: 202 RSSGIQITDTRISTGDDCISIGQGNDNVQIARVQCGPGHGMSVGSLGRYASEGDVTRVHV 261
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
R+ TFTGT N+V +V+NPI+IDQ YCPY C K
Sbjct: 262 RDMTFTGTTNGVRIKTWENSPSKSHAAHMVFENMVMKDVQNPIIIDQKYCPYYNCEHKYV 321
Query: 182 SQVKTSNVRFNNIRGTSANK--------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
S V +++F NI+GT+A + +PCQ + + +++ Y G T + C
Sbjct: 322 SGVTIQDIQFKNIKGTAATQVAVLLRCGVPCQGLVLQDVDLRYKGQG------GTLAKCE 375
Query: 234 NVKPTLFGKQIPATC 248
N K G Q P C
Sbjct: 376 NAKAKYVGNQFPKPC 390
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
V NVK++GA +G DDSK AW+ AC G + V+ P Y+
Sbjct: 25 VINVKNYGAHGNGANDDSKPLMAAWKAACGSAGAVTMVVTPGTYYI 70
>gi|449502537|ref|XP_004161670.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 453
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 129/253 (50%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SI+F LN + + G+ S++S FH ++ CYN ++KI A +SPNT+G+H+ +S
Sbjct: 206 ISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKL 265
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I++SVI TGDDCVS+ GHG+SVGSLGK ++ V + V+NCT
Sbjct: 266 VTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCT 325
Query: 150 -FTGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
F TN IV NNV+NPI+IDQ Y K S K
Sbjct: 326 IFNATNGARIKTWASPISGLASRIIFEDIVMNNVKNPIIIDQTY----GTKKKKESNWKV 381
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SNV+F NIRGTS + PC+ + + +IN Y G N++ S CSN K
Sbjct: 382 SNVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRDINLSYGGTNLR--NTTIVSSCSNAK 439
Query: 237 PTLFGKQIPATCV 249
FG Q P CV
Sbjct: 440 IATFGVQNPPPCV 452
>gi|5734763|gb|AAD50028.1|AC007651_23 Similar to polygalacturonase [Arabidopsis thaliana]
Length = 369
Score = 140 bits (352), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 137/258 (53%), Gaps = 55/258 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F+F+ +S++ GI S++S+ H N L + + + I A ++SPNT+GI I
Sbjct: 116 PKLAINMGFDFVKNSSMNGITSLNSKAGHFNFLSVDHFSITRVNIIAPSNSPNTDGIKIA 175
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+ +IS++ I+TGDDC+++ GHGIS+GSLGK +++ V GL V
Sbjct: 176 LSSNMQISNTHISTGDDCIAMLSGNTNFDIYNVKCGPGHGISIGSLGKNKDEKNVNGLMV 235
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
RN FTGT N+ NVENPI IDQ YCPY C+
Sbjct: 236 RNSVFTGTTNGIRIKTWESSASTIRIINLVYENLQMINVENPIGIDQKYCPYPPCSNMGD 295
Query: 182 SQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSL 231
S ++ NV NI GTS NK+ PC+++ + +IN ++G V+GP ++L
Sbjct: 296 SHIQIRNVTLKNIWGTSKNKVAVKFQCSKTFPCKDVQLIDINLTHHG----VDGP-ASAL 350
Query: 232 CSNVKPTLFGKQIPATCV 249
C NV + GK +P C+
Sbjct: 351 CENVDGSATGKMVPPHCL 368
>gi|356541683|ref|XP_003539303.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 255
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 127/241 (52%), Gaps = 53/241 (21%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
FNF N+S + S DS+ F++++L C N+ + I A + SPNT+GIHIG S+G I+
Sbjct: 21 FNFRNNSVTEVVTSKDSKSFYVDVLRCKNVTFINFSIAASSTSPNTDGIHIGRSSGINIT 80
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
+S I T DDC+SL GH I+VG LGK N++ V LTVRNCT T
Sbjct: 81 NSFIGTCDDCISLGDDNKHITILNVTSGPGHDINVGRLGKYPNEKPVESLTVRNCTLNNT 140
Query: 154 N------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
N I+ NV P++IDQ YCP N+CN + PS++K S V
Sbjct: 141 NNGLRIKTWLGTPIKXLVSDFYFEDIIMVNVSKPVIIDQEYCPCNQCNKQTPSKIKISEV 200
Query: 190 RFNNIRGTSAN----KIPCQNIG--IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQ 243
F +I+GTSA + C G + +I+ ++NGV T + C++VK FG+
Sbjct: 201 TFKDIKGTSATPNGVTLICTRXGCELSDIDLIFNGV-------PTMAACTDVKVHNFGEN 253
Query: 244 I 244
I
Sbjct: 254 I 254
>gi|297823097|ref|XP_002879431.1| hypothetical protein ARALYDRAFT_902380 [Arabidopsis lyrata subsp.
lyrata]
gi|297325270|gb|EFH55690.1| hypothetical protein ARALYDRAFT_902380 [Arabidopsis lyrata subsp.
lyrata]
Length = 404
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 130/255 (50%), Gaps = 57/255 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++I F F+ S I G++S++S+ H N+ + + + ITA DSPNT+GI IG S+
Sbjct: 153 MNIGFAFVKSSKINGLRSINSKMGHFNLFSVEDFNITGVTITAPGDSPNTDGIKIGKSSH 212
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I + I TGDDC+++ GHGISVGSLG+ ++ V GLTVRN
Sbjct: 213 MNIFNVTIGTGDDCIAILDGTSNLDISDVRCGPGHGISVGSLGRYKEEKNVQGLTVRNSI 272
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNI--KVPSQ 183
GT NI NV NPIVIDQ YCP+ +C+ K S
Sbjct: 273 INGTTDGLRIKTWAKSVSQISVSNFLYENIQMINVGNPIVIDQQYCPHGQCDSPGKYASH 332
Query: 184 VKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
V+ +V++N I GTS +K PCQ++ + NIN Y G + V T+LC
Sbjct: 333 VQIKDVKYNKIWGTSTSKEALKMQCSKAFPCQDVELSNINLKYVGRDGLV-----TALCE 387
Query: 234 NVKPTLFGKQIPATC 248
NV ++ GK +PA C
Sbjct: 388 NVGGSIRGKIVPANC 402
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+F+V+++GA DG +D++ +F AW EAC W +S V +PPG + +L T TG
Sbjct: 31 IFDVRNYGAHGDGRRDNAFSFTKAWNEACQWSNGRSTVYIPPGIF------YLRQVTFTG 84
>gi|242096076|ref|XP_002438528.1| hypothetical protein SORBIDRAFT_10g021590 [Sorghum bicolor]
gi|241916751|gb|EER89895.1| hypothetical protein SORBIDRAFT_10g021590 [Sorghum bicolor]
Length = 422
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 126/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ +F N++T++GI ++S++FH+N+ C + + D+ +TA DSPNT+GIHIG S+
Sbjct: 175 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 234
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ + I GDDC+S+ GHGISVGSLG+ ++++V + V++CT
Sbjct: 235 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 294
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI ++V NPI+ID YCP C K S+V
Sbjct: 295 KKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAKGDSKVTV 354
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS ++KIPC + + NI Y G N K T ++C N K
Sbjct: 355 KDVTFKNITGTSSTPEAVSLLCSDKIPCSGVTMDNIKVEYKGTNNK-----TMAVCQNAK 409
Query: 237 PTLFG 241
+ G
Sbjct: 410 GSATG 414
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
++ GA DG D +KA AW AC +G ++ +++P G YL+ NF
Sbjct: 56 DISKLGAKGDGKTDSTKALNEAWAAACGKEGPQT-LMIPKGDYLTGPLNF 104
>gi|449520239|ref|XP_004167141.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Cucumis
sativus]
Length = 453
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 128/253 (50%), Gaps = 55/253 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SI+F LN + + G+ SV+S FH ++ CYN ++KI A +SPNT+G+H+ +S
Sbjct: 206 ISIKFTRLNHTIVDGLTSVNSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKL 265
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I++SVI TGDDCVS+ GHG+SVGSLGK ++ V + V+NCT
Sbjct: 266 VTIANSVIGTGDDCVSIGHSAENITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCT 325
Query: 150 -FTGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
F TN IV NV+NPI+IDQ Y K S K
Sbjct: 326 IFNATNGARIKTWASPVSGLASRIIFEDIVMYNVKNPIIIDQTY----GTKKKKESNWKV 381
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SNV+F NIRGTS + PC+ + + +IN Y G N++ S CSN K
Sbjct: 382 SNVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRDINLSYGGTNLR--NTTIVSSCSNAK 439
Query: 237 PTLFGKQIPATCV 249
FG Q P CV
Sbjct: 440 IATFGVQNPPPCV 452
Score = 40.0 bits (92), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VF+V GA A+G DD++AF T W AC + L+P G +L
Sbjct: 83 VFDVTKHGAKANGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFL 128
>gi|426204242|gb|AFY12677.1| polygalacturonase 11c, partial [Medicago littoralis]
Length = 240
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 113/202 (55%), Gaps = 45/202 (22%)
Query: 18 SKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCY 77
+ A++ A + A W G KS V + +++ F F+N+S +TG+ S DS+ FH+ +LGC
Sbjct: 44 ATAYKQA-QPAAAWSGKKSNVKI----LMNLGFMFVNNSMVTGVTSKDSKNFHVMVLGCN 98
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--------------- 122
N+ + +TA A+SPNT+GIH+G S +I ++ I TGDDCVSL
Sbjct: 99 NITFDGFTVTAPAESPNTDGIHMGRSTDVKILNTNIGTGDDCVSLGDGSRKITVQGVKCG 158
Query: 123 -GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVT 157
GHGISVGSLG+ ++ V G+TV+NCT T T +I
Sbjct: 159 PGHGISVGSLGRYTTEDNVEGVTVKNCTLTSTQNGVRIKTWPDAPGTITVSDIHFEDITM 218
Query: 158 NNVENPIVIDQLYCPYNKCNIK 179
NNV NPI+IDQ YCP+N CN K
Sbjct: 219 NNVMNPIIIDQEYCPWNACNKK 240
>gi|426204246|gb|AFY12679.1| polygalacturonase 11c, partial [Medicago tornata]
Length = 240
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 112/202 (55%), Gaps = 45/202 (22%)
Query: 18 SKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCY 77
+ A++ A + A W G K V + +++ F F+N+S +TG+ S DS+ FH+ +LGC
Sbjct: 44 ATAYKQA-QPAAAWSGKKGNVKI----LMNLGFMFVNNSMVTGVTSKDSKNFHVMVLGCN 98
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--------------- 122
N+ + +TA ADSPNT+GIH+G S +I ++ I TGDDCVSL
Sbjct: 99 NITFDGFTVTAPADSPNTDGIHMGRSTDVKILNTNIGTGDDCVSLGDGSRKITVQGVKCG 158
Query: 123 -GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVT 157
GHGISVGSLG+ ++ V G+TV+NCT T T +I
Sbjct: 159 PGHGISVGSLGRYTTEDNVEGVTVKNCTLTATQNGVRIKTWPDAPGTITVSDIHFEDITM 218
Query: 158 NNVENPIVIDQLYCPYNKCNIK 179
NNV NPI+IDQ YCP+N CN K
Sbjct: 219 NNVLNPIIIDQEYCPWNACNKK 240
>gi|449473146|ref|XP_004153799.1| PREDICTED: polygalacturonase-like, partial [Cucumis sativus]
Length = 333
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 40/174 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++ NF+ +S +TGI S+DS+ FHIN+LGC NL + + ITA +SPNT+GIH+ SS
Sbjct: 160 MNLKLNFITNSIVTGITSLDSKNFHINLLGCKNLTFDHVTITAPGNSPNTDGIHVSSSEQ 219
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ IATGDDC+S+ GHGIS+GSLGK ++EVVG+TV+ C
Sbjct: 220 INILNTNIATGDDCISVGDSNKQVAISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCK 279
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIK 179
TGT +I +NV NPI+IDQ YCP+N+CN K
Sbjct: 280 LTGTTNGVRIKTWPDSAVAFPATDMHFEDIEMDNVSNPIIIDQEYCPWNQCNRK 333
>gi|426204244|gb|AFY12678.1| polygalacturonase 11c, partial [Medicago littoralis]
Length = 240
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 112/202 (55%), Gaps = 45/202 (22%)
Query: 18 SKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCY 77
+ A++ A + A W G K V + +++ F F+N+S ITG+ S DS+ FH+ +LGC
Sbjct: 44 ATAYKQA-QPAAAWSGKKGNVKI----LMNLGFMFVNNSMITGVTSKDSKNFHVMVLGCN 98
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--------------- 122
N+ + +TA ADSPNT+GIH+G S +I ++ I TGDDCVSL
Sbjct: 99 NITFDGFTVTAPADSPNTDGIHMGRSTDVKILNTNIGTGDDCVSLGDGSRKITVQGVKCG 158
Query: 123 -GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVT 157
GHGISVGSLG+ ++ V G+TV+NCT T T +I
Sbjct: 159 PGHGISVGSLGRYTTEDNVEGVTVKNCTLTSTQNGVRIKTWPDAPGTITVSDIHFEDITM 218
Query: 158 NNVENPIVIDQLYCPYNKCNIK 179
NNV NPI+IDQ YCP+N CN K
Sbjct: 219 NNVLNPIIIDQEYCPWNACNKK 240
>gi|8052532|gb|AAF71796.1|AC013430_5 F3F9.9 [Arabidopsis thaliana]
Length = 412
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 136/262 (51%), Gaps = 63/262 (24%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++ F F+ S +T IKS++S+ H+N + + + I A DSPNT+GI IGSSN
Sbjct: 155 MNMGFQFVRFSRLTRIKSINSKMGHLNFFSVQHFDITRVNIKAPGDSPNTDGIKIGSSNH 214
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I H IATGDDC+++ GHGISVGSLGK ++ V GL VRN
Sbjct: 215 MKIHHVDIATGDDCIAILSGTFNLDINKVNCGPGHGISVGSLGKFKGEKSVQGLIVRNSI 274
Query: 150 FTGT---------------NIVTN---------NVENPIVIDQLYCPYNKCNIKVP---- 181
F GT N+V+N +V++PI IDQ YCP C+ +V
Sbjct: 275 FNGTSNGVRIKTWPSPGEPNLVSNFLFKNLQMIDVQSPINIDQRYCPNPPCSFQVTSLTR 334
Query: 182 ----SQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPE 227
S+++ +V+F NI GTS K +PC+N+ + NIN V+ G +GP
Sbjct: 335 NKSFSKIQIRDVKFQNIWGTSTAKEAVKLQCSKNVPCKNVQLFNINIVHRG----RDGP- 389
Query: 228 TTSLCSNVKPTLFGKQIPATCV 249
TS+C NV + GK P +C+
Sbjct: 390 ATSVCENVGGWIGGKISPPSCI 411
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V+ +GA DG D++ AF AW++AC W G+ V +P G +
Sbjct: 34 VFDVRSYGARGDGKTDNTMAFTKAWKDACQWKGLPR-VYIPFGTF 77
>gi|255564242|ref|XP_002523118.1| Exopolygalacturonase clone GBGE184 precursor, putative [Ricinus
communis]
gi|223537680|gb|EEF39303.1| Exopolygalacturonase clone GBGE184 precursor, putative [Ricinus
communis]
Length = 272
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 124/231 (53%), Gaps = 53/231 (22%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
P + SI+F +++S + GI S++S++ H +I + +LKITA DSPNT+G+HI
Sbjct: 35 PAWCFQSIKFQGVSNSVVNGINSINSKFLHFHITYSSSFTAYNLKITAPGDSPNTDGMHI 94
Query: 101 GSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT 144
+NG +S S I TGDDC+S+ GHGISVGSLGK N+++V G+
Sbjct: 95 SETNGVNVSKSTIGTGDDCISIGAGVTDATFSEITCGPGHGISVGSLGKYQNEKDVNGIM 154
Query: 145 VRNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPYNKCNIKVP 181
V NCT + TN I+ ++VENPI+IDQ Y ++ P
Sbjct: 155 VTNCTLSKTNNGVRIKSWPGSPPSAASSITFQDIIMDSVENPILIDQNYGSHS----SEP 210
Query: 182 SQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVK 222
S+VK S+V + NI GTSA+ + PCQ I + +I+ Y G N K
Sbjct: 211 SRVKISDVHYKNIGGTSASNVAVSLTSSSSNPCQGIELADIDLTYAGTNGK 261
>gi|426204248|gb|AFY12680.1| polygalacturonase 11c, partial [Medicago rigiduloides]
Length = 240
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 107/192 (55%), Gaps = 44/192 (22%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G KS V + +++ F F+N+S + G+ S DS+ FH+ +LGC N + +T
Sbjct: 53 AAAWSGKKSNVKI----MMNLGFMFVNNSMVHGLTSKDSKNFHVMVLGCNNFTFDGFTVT 108
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A DSPNT+GIH+G S +I ++ IATGDDC+SL GHGISVGSL
Sbjct: 109 APGDSPNTDGIHMGRSTDVKILNTNIATGDDCISLGDGSRKITIQGVKCGPGHGISVGSL 168
Query: 132 GKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVID 167
GK ++ V G+TV+NCT T T +I+ NNV NPI+ID
Sbjct: 169 GKYTTEDNVEGVTVKNCTLTSTLNGVRIKTWPDAPGTITVSDIHFEDIIMNNVMNPIIID 228
Query: 168 QLYCPYNKCNIK 179
Q YCP+N+C+ K
Sbjct: 229 QEYCPWNQCSKK 240
>gi|297844650|ref|XP_002890206.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297336048|gb|EFH66465.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 401
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 136/258 (52%), Gaps = 55/258 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F+F+ S + GI S++S+ H+N + + + + A +SPNT+GI I
Sbjct: 148 PKLAINMGFDFVKKSRMNGITSLNSKAGHLNFFSVDHFDITGVGLKAPGNSPNTDGIKIA 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+ +IS++ I+TGDDC+++ GHGIS+GSLGK +++ V GLTV
Sbjct: 208 LSSNMQISNTHISTGDDCIAMLSGNTNFDIYNVTCGPGHGISIGSLGKNKDEKNVKGLTV 267
Query: 146 RNCTFTGT-------------------NIVTNN-----VENPIVIDQLYCPYNKCNIKVP 181
R+ FTGT N+V N VE+PI IDQ YCPY CN
Sbjct: 268 RDSVFTGTTNGIRIKTWESSASTIVISNLVYKNLQMIDVESPINIDQKYCPYPPCNKLGD 327
Query: 182 SQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSL 231
S ++ NV NI GTS NK+ PC+++ + +IN +NG V+GP +L
Sbjct: 328 SHIQIQNVTLKNIWGTSRNKVAVKFQCSKSFPCKDVQLVDINLTHNG----VDGP-AIAL 382
Query: 232 CSNVKPTLFGKQIPATCV 249
C NV+ + G+ IP C+
Sbjct: 383 CDNVEGSATGRIIPPHCL 400
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V+ +GA DG D++ AF AW++AC W+G S + +P G++
Sbjct: 31 VFDVRRYGAKGDGKTDNTNAFTNAWKDACTWNG-PSKMYIPKGRF 74
>gi|356519948|ref|XP_003528630.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 422
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 140/293 (47%), Gaps = 69/293 (23%)
Query: 8 GAVADGIKDDSKAFETAWREACNWDGIK--SAVLVPPGKYLSIRFNFLNDSTITGIKSVD 65
G DG DS W+ A N + S P Y S N + + I+SV+
Sbjct: 148 GGTFDGQGKDS------WQYAQNCESANDGSCARNPSNLYFSGNSNLV----VQNIRSVN 197
Query: 66 SRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--- 122
+ FHI + C N++L LK+ A SPNT+GIH+ S+ +S + IATGDDCVSL
Sbjct: 198 PKGFHIFVTKCTNVRLRKLKLVAPGTSPNTDGIHVSHSDTVIMSRNTIATGDDCVSLIPG 257
Query: 123 -------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---------------- 153
GHGIS+GSLGK ++ +V G+ ++NC+ TGT
Sbjct: 258 LRNIFINKLKCGPGHGISIGSLGKYADEGDVRGVRIKNCSLTGTTNGLRIKAWPERYPGA 317
Query: 154 -------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI---- 202
+I+ +V+NPI+IDQ Y Y C K PS VK N+ F+NIRGT+ + +
Sbjct: 318 ASDVSFSDIIMKDVKNPIIIDQEYECYPDCK-KKPSLVKLQNIHFSNIRGTTISPLAVDL 376
Query: 203 ------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PCQ + I +I ++K+ TTS C N +P G +P C
Sbjct: 377 RCSGLFPCQGVTIRDI-------DLKIGLTPTTSRCVNTRPLFGGLLMPPACA 422
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFN 51
+ NV+DFGA DG D +++F AW + C+ + + VP G+++ S+ FN
Sbjct: 52 IVNVQDFGAKGDGKFDCTESFMQAWAKTCHQSSGPARLYVPAGRFVVSSMYFN 104
>gi|356569547|ref|XP_003552961.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 274
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 119/227 (52%), Gaps = 52/227 (22%)
Query: 44 KYLSIRFNF--LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
K LS+ F+F LN++ I I + S+ FH+N+LG N+ + I A SPNT+GIHIG
Sbjct: 34 KKLSMNFDFGFLNNTIIRDITTKYSKKFHVNVLGYNNIIFTNFNIITRATSPNTDGIHIG 93
Query: 102 SSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTV 145
S I+ IAT DDC+SLG HGISVGSL K N+E V GLTV
Sbjct: 94 RSTXVNITSINIATDDDCISLGDGSKQIHVLNDTCGPWHGISVGSLEKYPNEELVKGLTV 153
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
RNCT T +I NV NPI+IDQ YCP+N+C ++P
Sbjct: 154 RNCTLNNTDNGVRIKTXPGNPRTTXVIDMHFEDINMVNVMNPIIIDQDYCPWNQCTKQIP 213
Query: 182 SQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNG 218
S++K S V F NI SA + +PC+++ + +I+ +NG
Sbjct: 214 SKIKISKVTFKNIIEISATQEGVVLICSSSVPCKDVMLSDIDLKFNG 260
>gi|413943904|gb|AFW76553.1| hypothetical protein ZEAMMB73_007553 [Zea mays]
Length = 317
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 124/236 (52%), Gaps = 51/236 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ T++GI +++++FH+N+ C ++ + D+ ITA DSPNT+GIHIG S+
Sbjct: 74 SLVLDFVNNGTVSGITLLNAKFFHMNVFQCKDMTIKDVTITAPEDSPNTDGIHIGDSSEV 133
Query: 107 EISHSVIATGDDCVSLGHGIS------------VGSLGKGINDEEVVGLTVRNCTFTGT- 153
IS + I TGDDC+S+G G S VGSLG+ ++++V + V++CT T
Sbjct: 134 TISGTTIGTGDDCISIGPGSSGINITGVTCGPGVGSLGRYKDEKDVTDVNVKDCTLKKTS 193
Query: 154 -----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVR 190
NI +V NP++ID YCP C K S+V +V
Sbjct: 194 NGVRIKAYEDAASVLTASKLHYENIAMEDVANPVIIDMKYCPNKICTAKGDSKVTVKDVT 253
Query: 191 FNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
F NI GTS ++KIPC +I + + Y G N K T ++C+N K
Sbjct: 254 FKNITGTSSTPSAVSLLCSDKIPCSDITMDKVKVEYKGTNNK-----TMAVCNNAK 304
>gi|357495419|ref|XP_003617998.1| Polygalacturonase [Medicago truncatula]
gi|41529571|emb|CAF07050.1| polygalacturonase precursor [Medicago truncatula]
gi|355519333|gb|AET00957.1| Polygalacturonase [Medicago truncatula]
Length = 343
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 41/196 (20%)
Query: 44 KYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG-S 102
+ ++ FNFL S + I S DS+ FH+N+LGC N + L ITA A S NT+GIHIG S
Sbjct: 143 RSMNFGFNFLKLSIVQDIISKDSKNFHVNVLGCTNFTFDGLTITAPATSKNTDGIHIGRS 202
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
++ ++ ++ I+TGDDC+SL GHGISVGSLGK +E + V+
Sbjct: 203 TDDVKVLNTNISTGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEATEHVLVK 262
Query: 147 NCTFT---------------GTNIVTN---------NVENPIVIDQLYCPYNKCNIKVPS 182
NCT + GT+ +T+ NV NP++IDQ YCP+N+C+ +VPS
Sbjct: 263 NCTISNTDNGVRIKTWPSSPGTSPITDMHFEDTIMVNVLNPVIIDQEYCPWNQCSKQVPS 322
Query: 183 QVKTSNVRFNNIRGTS 198
++K S V F NIRGT+
Sbjct: 323 KIKISKVIFKNIRGTT 338
>gi|414868396|tpg|DAA46953.1| TPA: hypothetical protein ZEAMMB73_391654 [Zea mays]
Length = 390
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 130/255 (50%), Gaps = 56/255 (21%)
Query: 44 KYLSIRFNFLND--STITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
K L F+N+ + + + SV+ ++FH+ +L N++++ LKI+A ++SPNT+GIHI
Sbjct: 141 KVLPTSVLFVNNQNTVVRDVTSVNPKFFHMALLSVKNIRMSGLKISAPSNSPNTDGIHIE 200
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I + I+TGDDC+S+ GHG+SVGSLG+ + +V + V
Sbjct: 201 RSSGISIMDTHISTGDDCISIGQGNDNVDVARVQCGPGHGMSVGSLGRYSGEGDVTRVHV 260
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
R+ TFTGT N+V +V+NPI+IDQ YCPY C K
Sbjct: 261 RDMTFTGTMNGVRIKTWENSPSKSNAAHMVFENMVMRDVQNPIIIDQKYCPYYNCEHKYV 320
Query: 182 SQVKTSNVRFNNIRGTSANK--------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
S V +++ F NI+GT+ +PC+ + + +++ Y G T++ C
Sbjct: 321 SGVTLNDIHFKNIKGTATTPVAVLLRCGVPCRGLVLQDVDLRYKGQG------GTSAKCE 374
Query: 234 NVKPTLFGKQIPATC 248
N K G Q P C
Sbjct: 375 NAKAKYLGYQFPKPC 389
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
V NVK++GA +G+ DD+K AW+ AC G + V VPPG Y
Sbjct: 25 VINVKNYGAHGNGVNDDTKPLMAAWKAACGSAGAATMV-VPPGTY 68
>gi|426204252|gb|AFY12682.1| polygalacturonase 11c, partial [Medicago noeana]
Length = 240
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 107/193 (55%), Gaps = 44/193 (22%)
Query: 27 EACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI 86
A W G KS V + +++ F F+N+S + G+ S DS+ FH+ +LGC N + +
Sbjct: 52 SAAAWSGKKSNVKI----MMNLGFMFVNNSMVHGLTSKDSKNFHVMVLGCNNFTFDGFTV 107
Query: 87 TAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGS 130
TA DSPNT+GIH+G S +I ++ IATGDDC+SL GHG+SVGS
Sbjct: 108 TAPGDSPNTDGIHMGRSTDIKILNTNIATGDDCISLGDGSRKITVQGVKCGPGHGLSVGS 167
Query: 131 LGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVI 166
LGK ++ V G+ V+NCT TGT +I+ NNV NPI+I
Sbjct: 168 LGKYTTEDNVEGVIVKNCTLTGTLNGVRIKTWPDAPGTITVSDIHFEDIIMNNVMNPIII 227
Query: 167 DQLYCPYNKCNIK 179
DQ YCP+N+C+ K
Sbjct: 228 DQEYCPWNQCSKK 240
>gi|242093570|ref|XP_002437275.1| hypothetical protein SORBIDRAFT_10g024010 [Sorghum bicolor]
gi|241915498|gb|EER88642.1| hypothetical protein SORBIDRAFT_10g024010 [Sorghum bicolor]
Length = 410
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 126/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +++N+ ++GI +++++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGV 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I ++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI+ID YCP C S+V
Sbjct: 283 KKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTV 342
Query: 187 SNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F N+ GTSA +KIPC + + N+ Y+G N K T ++C N K
Sbjct: 343 KDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNK-----TMAVCQNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSATG 402
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 19/160 (11%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
F++ GA DG KD +KA + AW AC G K +L+P G YL NF
Sbjct: 43 FDISKLGASGDGKKDSTKAVQEAWTSACGGTG-KQTILIPKGDYLVGPLNFTGPCKGDVT 101
Query: 62 KSVDSRYFHINILGCYN------LKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIAT 115
VD L Y L++++L IT + +G + S N +
Sbjct: 102 IQVDGNLLATTDLSQYKGNWIEILRVDNLVITGKG-KLDGQGPAVWSKNSCAKKY----- 155
Query: 116 GDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNI 155
DC L + + + +N+ EV G+T+ N F N+
Sbjct: 156 --DCKILPNSLVLDY----VNNGEVSGITLLNAKFFHMNV 189
>gi|297743916|emb|CBI36886.3| unnamed protein product [Vitis vinifera]
Length = 426
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 53/251 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
++FN +N+S + I S+DS+ FH I YN +L ITA +SPNT+G+H+ +
Sbjct: 169 LKFNKVNNSVVQDITSLDSKSFHYFITNSYNFTAFNLTITAPGNSPNTDGMHLSRCDLVN 228
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
+S+ I TGDDC+S+ GHG+S+GSLGK N+++VVG+ V NCT
Sbjct: 229 LSNFTIKTGDDCISVGQGSTNINITNVYCGPGHGLSIGSLGKYPNEKDVVGIHVTNCTLN 288
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
GT +IV N+V+NPI+IDQ Y + PS+VK S+
Sbjct: 289 GTTNGARIKTWPGSPPSQASSIIFQDIVMNSVKNPILIDQKY----GSHTGKPSRVKVSD 344
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V + N+RGT+ +K +PC + + +I++ YNG E +S C + +
Sbjct: 345 VLYKNLRGTTISKVAVSLVCSELVPCNGLQLEDIDFTYNGPATFKENLPFSSTCLHANAS 404
Query: 239 LFGKQIPATCV 249
GKQ P C
Sbjct: 405 YVGKQNPPACA 415
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VF+V +GAVADG D+ +AF W AC+W G S VL+P GK+L
Sbjct: 44 VFDVTKYGAVADGKTDNVEAFMKTWLAACHWRG-TSTVLIPEGKFL 88
>gi|357140148|ref|XP_003571632.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 416
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 131/255 (51%), Gaps = 56/255 (21%)
Query: 44 KYLSIRFNFLND--STITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
K L F+N+ + + I+SV+S++FHI +L N+++++L+I A +SPNT+GIHI
Sbjct: 167 KVLPTSVLFVNNQNTVVKDIQSVNSKFFHIALLNTNNIRMSNLRINAPGNSPNTDGIHIE 226
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
NG I+ + I+TGDDC+S+ GHG+SVGSLG+ + + +V + V
Sbjct: 227 RCNGVFIADTKISTGDDCISIGQGNDNVDISRVHCGPGHGMSVGSLGRYVGEGDVTRIHV 286
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
R+ TF GT N+V +V+NPI+IDQ YCPY C K
Sbjct: 287 RDMTFDGTMNGVRIKTWENSPTKSLAAHMVFENMVMKDVQNPIIIDQKYCPYYNCEHKYV 346
Query: 182 SQVKTSNVRFNNIRGTSANK--------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
S V +++F NI+GT++ +PCQ + + +++ + G +S C
Sbjct: 347 SGVTIKDIQFKNIKGTASLPVAVMLRCGVPCQGVVLQDVDLKFKGQG------GASSKCE 400
Query: 234 NVKPTLFGKQIPATC 248
N K G Q P C
Sbjct: 401 NAKAKYIGYQHPKPC 415
>gi|449442581|ref|XP_004139060.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449526375|ref|XP_004170189.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 386
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/268 (34%), Positives = 139/268 (51%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W S PPG S+ F+ + ++G+ S++S+ FHI I GC N+K LK++A
Sbjct: 127 WACKNSKSSCPPGA-TSLEFSNSKNIMVSGLTSLNSQMFHIVINGCQNVKAQGLKVSAAG 185
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S+ I +S+I TGDDC+S+ GHGIS+GSLG+
Sbjct: 186 NSPNTDGIHVALSSTVTILNSIIGTGDDCISIGPGTSNLWIENVACGPGHGISIGSLGRE 245
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ ++ V +TV++ TFT T +IV NVENPI+IDQ YC
Sbjct: 246 VQEDGVENVTVKSATFTNTQNGVRIKTWGKPSNGFARSVIFQDIVMVNVENPIIIDQNYC 305
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNV 221
P NK S VK S+V + NI GTSA +K PC +I + ++ ++
Sbjct: 306 PDNKGCPGQDSGVKISDVTYRNIHGTSATQVAMKFDCSSKFPCSDITLEDVK-----LSC 360
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
K E E + CS+ + + G P++C+
Sbjct: 361 KNEAAEAS--CSHAEGSAAGLVQPSSCL 386
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
FNV DFGA + D S+AFE AW AC S + VP G++ F
Sbjct: 22 FNVVDFGAKPNVQTDSSQAFEAAWASACRARTAVS-IYVPKGRFYVASLAF 71
>gi|115468432|ref|NP_001057815.1| Os06g0545400 [Oryza sativa Japonica Group]
gi|53791990|dbj|BAD54575.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|53791992|dbj|BAD54577.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|53792554|dbj|BAD53543.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113595855|dbj|BAF19729.1| Os06g0545400 [Oryza sativa Japonica Group]
gi|215704289|dbj|BAG93129.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768613|dbj|BAH00842.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768615|dbj|BAH00844.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 412
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 125/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ +F+N+ I+GI V+ ++FH+N+ N+ + D+ ITA DSPNT+GIH+G S+
Sbjct: 165 TLVLDFVNNGLISGISLVNPKFFHMNVFKSKNITIKDVTITAPGDSPNTDGIHMGDSSKI 224
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I +VI TGDDC+S+ GHGISVGSLG+ ++++V +TV+NC
Sbjct: 225 SIIDTVIGTGDDCISIGPGTEGVNISGVTCGPGHGISVGSLGRYKDEKDVTDVTVKNCVL 284
Query: 150 -----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
FT NI +V NPI+ID YCP C S+V
Sbjct: 285 KKSTNGVRIKSYEDAASVLTASKFTYENIKMEDVANPIIIDMKYCPNKICTANGNSKVTI 344
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++ F NI GTS ++K+PC + + +I Y+G N K T ++C N K
Sbjct: 345 KDITFKNITGTSSTPEAVSLLCSDKLPCTGVTLNDIKVEYSGTNNK-----TMAVCKNAK 399
Query: 237 PTLFG 241
T G
Sbjct: 400 GTATG 404
>gi|125555670|gb|EAZ01276.1| hypothetical protein OsI_23299 [Oryza sativa Indica Group]
Length = 413
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 125/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ +F+N+ I+GI V+ ++FH+N+ N+ + D+ ITA DSPNT+GIH+G S+
Sbjct: 166 TLVLDFVNNGLISGISLVNPKFFHMNVFKSKNITIKDVTITAPGDSPNTDGIHMGDSSKI 225
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I +VI TGDDC+S+ GHGISVGSLG+ ++++V +TV+NC
Sbjct: 226 SIIDTVIGTGDDCISIGPGTEGVNISGVTCGPGHGISVGSLGRYKDEKDVTDVTVKNCVL 285
Query: 150 -----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
FT NI +V NPI+ID YCP C S+V
Sbjct: 286 KKSTNGVRIKSYEDAASVLTASKFTYENIKMEDVANPIIIDMKYCPNKICTANGNSKVTI 345
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++ F NI GTS ++K+PC + + +I Y+G N K T ++C N K
Sbjct: 346 KDITFKNITGTSSTPEAVSLLCSDKLPCTGVTLNDIKVEYSGTNNK-----TMAVCKNAK 400
Query: 237 PTLFG 241
T G
Sbjct: 401 GTATG 405
>gi|449462487|ref|XP_004148972.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 458
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 134/264 (50%), Gaps = 59/264 (22%)
Query: 35 KSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPN 94
K L+P +SI+F+ LN + + GI S++S+ FH+++ CYN + ++ I A +SPN
Sbjct: 204 KDCQLLP----ISIKFSGLNHTIVDGITSLNSKGFHMSLFNCYNFTITNVNIIAPDESPN 259
Query: 95 TEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDE 138
T+GIH+ +S I +S+I TGDDCVS+ GHG+SVGSLGK ++
Sbjct: 260 TDGIHLSTSELVNIMNSIIGTGDDCVSIGHSTVKITVTNVTCGPGHGLSVGSLGKYSREK 319
Query: 139 EVVGLTVRNCT-FTGTN----------------------IVTNNVENPIVIDQLYCPYNK 175
+V + V+NCT F TN I+ NV+ PI+IDQ Y
Sbjct: 320 DVYDVLVKNCTIFNATNGARIKTFASPISGLASGIIFEDIIMYNVKYPIIIDQTY----S 375
Query: 176 CNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEG 225
+ S+ K S+V F NIRGTSA + PC+ + + +IN Y G + K
Sbjct: 376 TDENKESKWKVSDVHFKNIRGTSATNVGVLLECSKLLPCEGVVLKDINLTYGGTDSK--N 433
Query: 226 PETTSLCSNVKPTLFGKQIPATCV 249
S C N K T FG Q P CV
Sbjct: 434 TTIVSSCLNAKITTFGVQNPPPCV 457
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VF+V GA ADG DD++AFET W AC +L+P G YL
Sbjct: 88 VFDVTKHGAKADGKTDDAQAFETTWIAACRNTVGPVKILIPKGTYL 133
>gi|225437430|ref|XP_002268540.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Vitis vinifera]
Length = 411
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 53/251 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
++FN +N+S + I S+DS+ FH I YN +L ITA +SPNT+G+H+ +
Sbjct: 165 LKFNKVNNSVVQDITSLDSKSFHYFITNSYNFTAFNLTITAPGNSPNTDGMHLSRCDLVN 224
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
+S+ I TGDDC+S+ GHG+S+GSLGK N+++VVG+ V NCT
Sbjct: 225 LSNFTIKTGDDCISVGQGSTNINITNVYCGPGHGLSIGSLGKYPNEKDVVGIHVTNCTLN 284
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
GT +IV N+V+NPI+IDQ Y + PS+VK S+
Sbjct: 285 GTTNGARIKTWPGSPPSQASSIIFQDIVMNSVKNPILIDQKYGSHT----GKPSRVKVSD 340
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V + N+RGT+ +K +PC + + +I++ YNG E +S C + +
Sbjct: 341 VLYKNLRGTTISKVAVSLVCSELVPCNGLQLEDIDFTYNGPATFKENLPFSSTCLHANAS 400
Query: 239 LFGKQIPATCV 249
GKQ P C
Sbjct: 401 YVGKQNPPACA 411
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
VF+V +GAVADG D+ + AC+W G S VL+P GK+L + F
Sbjct: 44 VFDVTKYGAVADGKTDNVEVLNA----ACHWRG-TSTVLIPEGKFLVGQATF 90
>gi|413943672|gb|AFW76321.1| zea m 13 allergen [Zea mays]
Length = 410
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 127/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++GI ++S++FH+N+ C N+ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGITLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 283 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++ F NI GTS+ K+PC + + ++N Y+G N K T ++C+N K
Sbjct: 343 KDITFKNITGTSSTPEAISLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSTKG 402
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 90
>gi|413943673|gb|AFW76322.1| exopolygalacturonase8 [Zea mays]
Length = 410
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 127/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C N+ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 283 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ K+PC + + ++N Y+G N K T ++C+N K
Sbjct: 343 KDVTFKNITGTSSTPEAISLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSTKG 402
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 90
>gi|297852118|ref|XP_002893940.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339782|gb|EFH70199.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 136/260 (52%), Gaps = 56/260 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHHFNITGITITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNIHISNTHIGTGDDCIAILSGTTNLDISNVECGPGHGISVGSLGKNKDEKDVKDLTV 267
Query: 146 RNCTFTGT-------------------NIVTNNVE-----NPIVIDQLYCPYNKC--NIK 179
R+ F GT N V N++ PI IDQ YCP+ C K
Sbjct: 268 RDTVFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHEQK 327
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ +++ NI GTS NK+ PC+N+ + +IN +NG+ +GP +T
Sbjct: 328 GESHVQIQDIKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINLKHNGLE---DGP-ST 383
Query: 230 SLCSNVKPTLFGKQIPATCV 249
++C N+ ++ GK +P C+
Sbjct: 384 AVCENINGSIRGKMVPQHCL 403
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ G+ DG D++ AF + W+ AC S + VP G +
Sbjct: 30 VFNVRRHGSKPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGTF 74
>gi|413922033|gb|AFW61965.1| hypothetical protein ZEAMMB73_966547 [Zea mays]
Length = 394
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 124/250 (49%), Gaps = 54/250 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ F ++ + + SV+ ++FH+ +L N++++ L+I A +SPNT+GIHI S+G
Sbjct: 149 SVLFVNSQNTVVRDVTSVNPKFFHMALLSVKNVRMSGLRIRAPPNSPNTDGIHIERSSGV 208
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I + I TGDDC+S+ GHG+SVGSLG+ + +V + VR+ TF
Sbjct: 209 SIVDTHIGTGDDCISVGQGNDNVEVSRVQCGPGHGMSVGSLGRYSGEGDVTRVHVRDMTF 268
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
TGT N+V +V+NPI+IDQ YCPY C K S V
Sbjct: 269 TGTTNGVRIKTWENSPSRSNAAHMVFENMVMKDVQNPIIIDQKYCPYYNCEHKYVSGVTL 328
Query: 187 SNVRFNNIRGTSANK--------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
++ F NI+GT+ +PCQ + + +++ Y G T++ C N K
Sbjct: 329 KDIHFRNIKGTATTPVAVLLRCGVPCQGLVLQDVDLRYKGQGA------TSAKCENAKAK 382
Query: 239 LFGKQIPATC 248
G Q P C
Sbjct: 383 YVGYQFPKPC 392
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
NVK++GA +G+ DD+K AW+ AC G + V+ P Y+
Sbjct: 29 INVKNYGAHGNGVNDDTKPLMAAWKAACGSAGAVTMVVAPGTYYI 73
>gi|255576406|ref|XP_002529095.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531446|gb|EEF33279.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 390
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 130/272 (47%), Gaps = 56/272 (20%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A W ++ + PPG SI F +D ++G+ S++S+ FHI I +N+ L LK
Sbjct: 125 RGASFWACKRAGKVCPPGAR-SISFVGSSDVVVSGLTSMNSQMFHIAIHKSHNIVLQKLK 183
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
I A + SPNT+G+H+ SS G I S I TGDDC+SL GHGIS+G
Sbjct: 184 IIAPSLSPNTDGLHMQSSTGITIKDSTITTGDDCISLGPGSQNIWIQRIACGPGHGISIG 243
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVI 166
SL + N+E V +TV N FTGT +IV N NPI+I
Sbjct: 244 SLAQYKNEEGVQNVTVANVVFTGTQNGVRIKSWERPSTAFVKNILFRDIVMKNTYNPIII 303
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YCP + S VK S V + NIRGTSA ++ PC+ + + NI Y
Sbjct: 304 DQEYCPNGRGCPNQSSGVKISGVTYKNIRGTSAMRVAMNFLCSSSNPCRGLKLQNIKLTY 363
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
+ TS C + + G IP +C
Sbjct: 364 ------LSRGTATSSCIHAHGSTAGVVIPRSC 389
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV FGA DG D S+AF AW AC G + V VP G +L
Sbjct: 25 AYNVVSFGAKPDGKSDSSQAFVRAWLSACRSTG-PATVYVPKGSFL 69
>gi|326516060|dbj|BAJ88053.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/255 (34%), Positives = 130/255 (50%), Gaps = 59/255 (23%)
Query: 18 SKAFETAWREACNWDGIKSAVL---VPPGKYL------SIRFNFLNDSTITGIKSVDSRY 68
SKA T A N+ IK V G+ + ++ + + +ST+ G++ VDSR
Sbjct: 141 SKAKATVMTPAANYGSIKFVSFPSCVRDGEVILRAIVQTLELDGVTNSTVRGLRFVDSRG 200
Query: 69 FHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------ 122
FH++ ++ L+I A A S NT+GIH+G S+ I+ SVI TGDDCVS+
Sbjct: 201 FHVSFHRSSSVAAEGLRIHAPASSRNTDGIHVGCSSHVRITDSVIGTGDDCVSVGPGSSD 260
Query: 123 ----------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------- 153
GHGISVGSLG+ +E+V GL +RNCT GT
Sbjct: 261 VVVTGIVCGPGHGISVGSLGREEGEEDVRGLVIRNCTVRGTTNGLRIKTWPGSPPGRATN 320
Query: 154 ----NIVTNNVENPIVIDQLYCPYNKC-NIKVPSQVKTSNVRFNNIRGTSANKI------ 202
+I+ +V NPI+IDQ YCP+ +C ++ PS+V+ S+V F I GTS++K+
Sbjct: 321 ITFEDIIMADVSNPILIDQQYCPHGRCSDVDKPSRVQISDVTFRRIEGTSSSKVAVQLRC 380
Query: 203 ----PCQNIGIGNIN 213
PC + + IN
Sbjct: 381 SEEQPCSGVRLDGIN 395
>gi|222635715|gb|EEE65847.1| hypothetical protein OsJ_21621 [Oryza sativa Japonica Group]
Length = 286
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 125/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ +F+N+ I+GI V+ ++FH+N+ N+ + D+ ITA DSPNT+GIH+G S+
Sbjct: 39 TLVLDFVNNGLISGISLVNPKFFHMNVFKSKNITIKDVTITAPGDSPNTDGIHMGDSSKI 98
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I +VI TGDDC+S+ GHGISVGSLG+ ++++V +TV+NC
Sbjct: 99 SIIDTVIGTGDDCISIGPGTEGVNISGVTCGPGHGISVGSLGRYKDEKDVTDVTVKNCVL 158
Query: 150 -----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
FT NI +V NPI+ID YCP C S+V
Sbjct: 159 KKSTNGVRIKSYEDAASVLTASKFTYENIKMEDVANPIIIDMKYCPNKICTANGNSKVTI 218
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++ F NI GTS ++K+PC + + +I Y+G N K T ++C N K
Sbjct: 219 KDITFKNITGTSSKPEGVSPPCSDKLPCTGVTLNDIKVEYSGTNNK-----TMAVCKNAK 273
Query: 237 PTLFG 241
T G
Sbjct: 274 GTATG 278
>gi|89892729|gb|ABD79098.1| Zea m 13 allergen [Zea mays]
Length = 411
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 127/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++GI ++S++FH+N+ C N+ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 164 SLVMDFVNNGEVSGITLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGI 223
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 224 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVRDINVKDCTL 283
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 284 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 343
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++ F NI GTS+ K+PC + + ++N Y+G N K T ++C+N K
Sbjct: 344 KDITFKNITGTSSTPEAISLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAK 398
Query: 237 PTLFG 241
+ G
Sbjct: 399 GSTKG 403
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 42 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 91
>gi|297605988|ref|NP_001057816.2| Os06g0545800 [Oryza sativa Japonica Group]
gi|255677132|dbj|BAF19730.2| Os06g0545800, partial [Oryza sativa Japonica Group]
Length = 252
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/245 (34%), Positives = 125/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ +F+N+ I+GI V+ ++FH+N+ N+ + D+ ITA DSPNT+GIH+G S+
Sbjct: 5 TLVLDFVNNGLISGISLVNPKFFHMNVFKSKNITIKDVTITAPGDSPNTDGIHMGDSSKI 64
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I +VI TGDDC+S+ GHGISVGSLG+ ++++V +TV+NC
Sbjct: 65 SIIDTVIGTGDDCISIGPGTEGVNISGVTCGPGHGISVGSLGRYKDEKDVTDVTVKNCVL 124
Query: 150 -----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
FT NI +V NPI+ID YCP C S+V
Sbjct: 125 KKSTNGVRIKSYEDAASVLTASKFTYENIKMEDVANPIIIDMKYCPNKICTANGNSKVTI 184
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++ F NI GTS ++K+PC + + +I Y+G N K T ++C N K
Sbjct: 185 KDITFKNITGTSSTPEAVSLLCSDKLPCTGVTLNDIKVEYSGTNNK-----TMAVCKNAK 239
Query: 237 PTLFG 241
T G
Sbjct: 240 GTATG 244
>gi|426204257|gb|AFY12685.1| polygalacturonase 11c, partial [Medicago polymorpha]
Length = 240
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 107/192 (55%), Gaps = 44/192 (22%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G KS + + ++++ F F+N+S + G+ S DS+ FH+ +LGC N + +T
Sbjct: 53 AAAWSGKKSNLKI----FMNLGFMFVNNSMVRGLTSKDSKNFHVMVLGCNNFTFDGFTVT 108
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A +SPNT+GIH+G S +I ++ I TGDDC+SL GHGIS+GSL
Sbjct: 109 APGNSPNTDGIHMGRSTDVKILNTNIGTGDDCISLGDGSRKITVQNVKCGPGHGISIGSL 168
Query: 132 GKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVID 167
GK ++ V G+ V+NCT T T NI+ NNV+NPI+ID
Sbjct: 169 GKYTTEDNVEGVIVKNCTLTATENGVRIKTWPDAPGTITVSDIHFENIIMNNVKNPIIID 228
Query: 168 QLYCPYNKCNIK 179
Q YCP+N+C+ K
Sbjct: 229 QEYCPWNQCSKK 240
>gi|297848850|ref|XP_002892306.1| hypothetical protein ARALYDRAFT_887757 [Arabidopsis lyrata subsp.
lyrata]
gi|297338148|gb|EFH68565.1| hypothetical protein ARALYDRAFT_887757 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 133 bits (335), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 132/268 (49%), Gaps = 56/268 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS PPG SI FN D I+G+KS++S+ H+ + GC N+ + ++K+ A
Sbjct: 132 WSCRKSGQNCPPG-VRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVVVRNVKLVAPG 190
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+G H+ S G + S + TGDDCV++ GHG+S+GSL K
Sbjct: 191 NSPNTDGFHVQLSTGVTFTGSTVQTGDDCVAIGPGTRNFLITKLACGPGHGVSIGSLAKE 250
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+N++ V +TV + FTG+ ++V NVENPI+IDQ YC
Sbjct: 251 LNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQDLVMKNVENPIIIDQNYC 310
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNV 221
P ++ S VK S V + NI+GTSA + PC I + +I +YN
Sbjct: 311 PTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLIYN---- 366
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
+G TSLC N G P +C+
Sbjct: 367 --KGTPATSLCFNAVGKSLGVIQPTSCL 392
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV FGA DG+ D + AF AW+ AC + V+VP G +L
Sbjct: 27 VFNVVSFGAKPDGVTDSTAAFLKAWQRACG-SASSATVVVPNGTFL 71
>gi|147845173|emb|CAN79473.1| hypothetical protein VITISV_023355 [Vitis vinifera]
Length = 1033
Score = 133 bits (335), Expect = 6e-29, Method: Composition-based stats.
Identities = 84/205 (40%), Positives = 108/205 (52%), Gaps = 54/205 (26%)
Query: 70 HINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS-------- 121
HI + NL ++ I+A DS NT+GIHIG S+G IS S I GDDCVS
Sbjct: 856 HIPHVRFKNLTFYNVAISAPEDSLNTDGIHIGRSSGIHISDSTIEPGDDCVSIGDGSEQI 915
Query: 122 --------LGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPY 173
LGHGI VGSLGK N+E VVG++V+NC FT N +N
Sbjct: 916 NIQRVTYGLGHGICVGSLGKYPNEEPVVGISVKNCIFT-------NTQN----------- 957
Query: 174 NKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKV 223
PS++K SNV F NIRGT++ + +PCQ++ +G+IN Y+G
Sbjct: 958 -----GSPSRIKLSNVSFRNIRGTTSTQVAVKLVCSQGVPCQDVKLGDINLKYSG----N 1008
Query: 224 EGPETTSLCSNVKPTLFGKQIPATC 248
EGP S C N+KP L G Q+P TC
Sbjct: 1009 EGP-AMSQCKNIKPNLLGNQLPRTC 1032
>gi|356558193|ref|XP_003547392.1| PREDICTED: uncharacterized protein LOC100789777 [Glycine max]
Length = 761
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 130/256 (50%), Gaps = 59/256 (23%)
Query: 8 GAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSR 67
G DG+ +S A E C D + V P SI F+ + + I IKSV+ +
Sbjct: 147 GGTFDGMGKES----WATTENCEADQTDTCVRNPS----SIYFHKVRNGIIQNIKSVNPK 198
Query: 68 YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----- 122
FH + C N++L LK+TA A SPNT+GIHI +S ++S + I TGDDCVS+
Sbjct: 199 GFHFFVTNCANIRLRLLKLTAPATSPNTDGIHISNSIDVKLSKNTIETGDDCVSMIQGVN 258
Query: 123 -----------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------ 153
GHGIS+GSLGK +++EV + V+NCT GT
Sbjct: 259 NITINKLKCGPGHGISIGSLGKYADEQEVKDIRVKNCTMVGTTNGLRIKTWPDKYPGSAS 318
Query: 154 -----NIVTNNVENPIVIDQLY-CPYNKCNIKVPSQVKTSNVRFNNIRGTS--------- 198
+IV NV+NPI+IDQ Y C C K PS VK +V F+NIRGT+
Sbjct: 319 AITFSDIVMENVKNPIIIDQEYDCEPANCQ-KKPSLVKIKDVVFSNIRGTTISPIAVDLR 377
Query: 199 -ANKIPCQNIGIGNIN 213
+ + PCQ++ + NIN
Sbjct: 378 CSKQFPCQDVKLKNIN 393
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 112/294 (38%), Gaps = 105/294 (35%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS-------------- 47
FN+ +GAVADG D S AF AW +AC+ G S VP G +
Sbjct: 467 FNLTRYGAVADGRTDSSSAFLAAWEDACSHTG-SSTFFVPKGTFFLGPVSFSGPCHNNGS 525
Query: 48 -----------------------IRFNFLNDSTITGIKS---VD-------SRYFHINIL 74
+ F LN + G+ S +D S+ ++
Sbjct: 526 PKIEIMGTLKAPISLNDFPTLEWVVFKNLNGFNLPGLNSKATLDAQGQESWSKAACYRVM 585
Query: 75 GCYNL--KLNDLKIT----AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------ 122
C+N+ L L ++ + N++ H+ I SV GDDCV++
Sbjct: 586 KCHNIPTALKFLNVSNGSVRNISLLNSKAAHVSIHKCENIDFSV---GDDCVAIGPGSTN 642
Query: 123 ----------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCP 172
GHGISVG LGK N+++V G+ + NC GT N V
Sbjct: 643 ISVSFVHCGPGHGISVGILGKSSNEKDVAGVHISNCIINGTK---NGVR----------- 688
Query: 173 YNKCNIKVPSQVKTSNVRFNNIRGT----------SANKIPCQNIGIGNINWVY 216
PSQVK +V F NI GT ++ +P +NI + NIN Y
Sbjct: 689 --------PSQVKLEDVSFENISGTYNTMHGVTLWCSSAVPSENILLANINLNY 734
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+ NV FGA DG D ++AF AWR C +++ +L+P G+++
Sbjct: 51 IVNVLSFGAKPDGKFDCTQAFMDAWRATCK-SNVQARLLIPQGRFV 95
>gi|125555668|gb|EAZ01274.1| hypothetical protein OsI_23298 [Oryza sativa Indica Group]
Length = 365
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 123/242 (50%), Gaps = 55/242 (22%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
+F+N+ ++GI V+ ++FH+N+ C N+ + DL ITA DSPNT+ IH+G S+ I
Sbjct: 121 LDFVNNGLVSGISLVNPKFFHMNMFKCKNITIKDLTITAPEDSPNTDDIHMGDSSKISII 180
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT---- 149
+VI TGDDC+S+ G+GISVGSLG+ ++++V +TV+NC
Sbjct: 181 DTVIGTGDDCISIGPGTEGVNISSVTCGPGYGISVGSLGRYKDEKDVTDVTVKNCVLKKS 240
Query: 150 --------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
FT NI +V NPI+ID YCP C S+V ++
Sbjct: 241 TNGVRIKSYEDAASVLTASKFTYENIKMEDVANPIIIDTKYCPNKICTANGNSKVTIKDI 300
Query: 190 RFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
F NI GTS ++K+PC + + +IN Y G N K T ++C N K T
Sbjct: 301 TFKNITGTSSTPEAVSLFCSDKLPCTGVTLNDINVEYAGKNNK-----TMAVCKNAKGTA 355
Query: 240 FG 241
G
Sbjct: 356 TG 357
>gi|548492|sp|P35338.1|PGLR2_MAIZE RecName: Full=Exopolygalacturonase; Short=ExoPG; AltName:
Full=Galacturan 1,4-alpha-galacturonidase; AltName:
Full=Pectinase; Flags: Precursor
gi|288379|emb|CAA45751.1| polygalacturonase [Zea mays]
Length = 410
Score = 133 bits (335), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C N+ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 283 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ K+PC + ++N Y+G N K T ++C+N K
Sbjct: 343 KDVTFKNITGTSSTPEAISLLCTAKVPCTGATMDDVNVEYSGTNNK-----TMAICTNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSTKG 402
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 90
>gi|426204267|gb|AFY12690.1| polygalacturonase 11c, partial [Medicago ruthenica]
Length = 238
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 105/189 (55%), Gaps = 44/189 (23%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W+G KS+ V +++ FNF+N+S + I S DS+ FH+ +LGC N + ITA
Sbjct: 54 WNGKKSSNKV----FMNFGFNFVNNSIVRDITSKDSKNFHVMVLGCNNFTFDGFTITAPG 109
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
DSPNT+GIH+G S +I ++ I TGDDCVSL GHGISVGSLGK
Sbjct: 110 DSPNTDGIHMGRSTDVKILNTNIGTGDDCVSLGDGSKQITVQNVNCGPGHGISVGSLGKF 169
Query: 135 INDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVIDQLY 170
++ V G+TV+NCT T T +I NV+NP++IDQ Y
Sbjct: 170 TTEQNVEGVTVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEY 229
Query: 171 CPYNKCNIK 179
CP+N+C+ K
Sbjct: 230 CPWNQCSKK 238
>gi|449498570|ref|XP_004160573.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Cucumis
sativus]
Length = 440
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 126/251 (50%), Gaps = 55/251 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+F+ LN + I G+ S++S FH ++ CYN ++KITA +SPNT+G+H+ +S
Sbjct: 193 SIKFSRLNHTIIDGLTSINSMGFHTSVFYCYNFTATNMKITAPHNSPNTDGMHLSTSKLV 252
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
IS+S+I TGDDCVS+ GHG+SVGSLGK ++ V + V+NCT
Sbjct: 253 TISNSIIGTGDDCVSIGHSTENIIITNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTI 312
Query: 150 FTGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
F TN IV NV+NPI+IDQ Y S K S
Sbjct: 313 FNATNGARIKTFASPIPGLASRIVFEDIVMYNVKNPIIIDQTYGTEEGKE----SNWKVS 368
Query: 188 NVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
++ F NIRGTS + PC+ + + +IN Y G +++ S CSN K
Sbjct: 369 DILFKNIRGTSTTNVAVLLECSKLFPCEGVELRDINLTYGGTDLR--NTTVVSSCSNAKI 426
Query: 238 TLFGKQIPATC 248
FG Q P C
Sbjct: 427 ATFGVQNPPPC 437
>gi|1360705|emb|CAA40851.1| polygalacturonase [Zea mays]
Length = 408
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 161 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 220
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 221 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 280
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 281 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 340
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ K+PC + + ++N Y+G N K T ++C+N K
Sbjct: 341 KDVTFKNITGTSSTPEVVSLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAK 395
Query: 237 PTLFG 241
+ G
Sbjct: 396 GSTKG 400
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 39 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 88
>gi|288367|emb|CAA46680.1| polygalacturonase [Zea mays]
Length = 410
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 283 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ K+PC + + ++N Y+G N K T ++C+N K
Sbjct: 343 KDVTFKNITGTSSTPEVVSLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSTKG 402
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 90
>gi|162464324|ref|NP_001105432.1| exopolygalacturonase precursor [Zea mays]
gi|129940|sp|P26216.1|PGLR1_MAIZE RecName: Full=Exopolygalacturonase; Short=ExoPG; AltName:
Full=Galacturan 1,4-alpha-galacturonidase; AltName:
Full=Pectinase; Flags: Precursor
gi|22417|emb|CAA40850.1| polygalacturonase [Zea mays]
gi|22419|emb|CAA44249.1| polygalacturonase [Zea mays]
gi|288374|emb|CAA46679.1| polygalacturonase [Zea mays]
gi|413916395|gb|AFW56327.1| exopolygalacturonase Precursor [Zea mays]
gi|413943670|gb|AFW76319.1| exopolygalacturonase Precursor [Zea mays]
gi|413943674|gb|AFW76323.1| polygalacturonase2 [Zea mays]
Length = 410
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 283 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ K+PC + + ++N Y+G N K T ++C+N K
Sbjct: 343 KDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSTKG 402
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 90
>gi|22422|emb|CAA40910.1| polygalacturonase [Zea mays]
Length = 406
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 159 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 218
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 219 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 278
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 279 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 338
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ K+PC + + ++N Y+G N K T ++C+N K
Sbjct: 339 KDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAK 393
Query: 237 PTLFG 241
+ G
Sbjct: 394 GSTKG 398
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 37 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 86
>gi|426204263|gb|AFY12688.1| polygalacturonase 11c, partial [Medicago sativa subsp. caerulea]
Length = 240
Score = 132 bits (333), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 106/192 (55%), Gaps = 44/192 (22%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G S V + ++++ F F+N+S + G+ S DS+ FH+ +LGC N + +T
Sbjct: 53 AAAWSGKNSNVKI----FMNLGFMFVNNSMVHGLTSKDSKNFHVMVLGCNNFTFDGFTVT 108
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A DSPNT+GIH+G S +I ++ IATGDDC+SL GHGISVGSL
Sbjct: 109 APGDSPNTDGIHMGRSTDIKILNTNIATGDDCISLGDGSRKITVQNVKCGPGHGISVGSL 168
Query: 132 GKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVID 167
GK ++ V G+ V+NCT T T +I+ NNV NP++ID
Sbjct: 169 GKYTTEDNVEGVIVKNCTLTATQNGVRIKTWPDAPGTITVSDIHFEDIIMNNVMNPVIID 228
Query: 168 QLYCPYNKCNIK 179
Q YCP+N+C+ K
Sbjct: 229 QEYCPWNQCSKK 240
>gi|297820832|ref|XP_002878299.1| hypothetical protein ARALYDRAFT_486450 [Arabidopsis lyrata subsp.
lyrata]
gi|297324137|gb|EFH54558.1| hypothetical protein ARALYDRAFT_486450 [Arabidopsis lyrata subsp.
lyrata]
Length = 388
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 135/268 (50%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS P G SI F ++ I+G+ S++S+ FH+ I GC N+KL +K++A
Sbjct: 129 WSCKKSGKNCPSGA-TSIGFQSSSNVVISGLTSLNSQMFHVAINGCRNVKLEGVKVSADG 187
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ SS+ I +S I+TGDDCVS+ GHGIS+GSLGK
Sbjct: 188 NSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKE 247
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ V +TV+ TFTGT + V NNV+NPIVIDQ YC
Sbjct: 248 SVEAGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYC 307
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P N+ S +K S+V F +I GTSA ++ PC I I ++ Y
Sbjct: 308 PGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYR---- 363
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
P TT CS+ + G Q P +C+
Sbjct: 364 --NKPATTD-CSHAGGSEAGFQRPNSCL 388
>gi|15220596|ref|NP_172056.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|4836915|gb|AAD30617.1|AC007153_9 putative polygalacturonase [Arabidopsis thaliana]
gi|332189750|gb|AEE27871.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 394
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/273 (32%), Positives = 133/273 (48%), Gaps = 56/273 (20%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R + W KS PPG SI FN D I+G+KS++S+ H+ + GC N+ + +++
Sbjct: 127 RGSGFWSCRKSGQNCPPG-VRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVAVRNIR 185
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+ A DSPNT+G + S G ++ S + TGDDCV++ GHG+S+G
Sbjct: 186 LVAPGDSPNTDGFTVQFSTGVTLTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGVSIG 245
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVI 166
SL K +N++ V +TV + FTG+ N++ NV+NPI+I
Sbjct: 246 SLAKQLNEDGVENVTVSSSVFTGSQNGVRIKSWARPSTGFVRNVFFQNLIMRNVQNPIII 305
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YCP N+ S VK + V + NI+GTSA + PC I + +I Y
Sbjct: 306 DQNYCPSNQGCPTEHSGVKITQVTYKNIQGTSATQEAMKLVCSKSNPCTGITLQDIKLTY 365
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
N +G TSLC N G P +C+
Sbjct: 366 N------KGTPATSLCFNAVGKNLGVIQPTSCL 392
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV FGA DG+ D + AF AW+ AC + V+VP G +L
Sbjct: 27 VFNVVSFGAKPDGVTDSTAAFLKAWQGACG-SAASATVVVPTGTFL 71
>gi|100912|pir||S16998 polygalacturonase (EC 3.2.1.15) - maize
Length = 363
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 116 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 175
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 176 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 235
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 236 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 295
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ K+PC + + ++N Y+G N K T ++C+N K
Sbjct: 296 KDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAK 350
Query: 237 PTLFG 241
+ G
Sbjct: 351 GSTKG 355
>gi|326513250|dbj|BAK06865.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 432
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 128/254 (50%), Gaps = 56/254 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F +D+ I GI ++S++FH+NI C + + D+K+ A DSPNT+GIH+G S+
Sbjct: 183 SLVLDFCDDALIEGISIINSKFFHMNIYECKGVTVKDVKVNAPGDSPNTDGIHMGDSSNV 242
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I + IA GDDC+S+ GHGIS+GSLG+ ++++V + V+NC F
Sbjct: 243 NIIDTTIAVGDDCISIGPGSKQVNISGVTCGPGHGISIGSLGRYKDEKDVTDIHVKNCVF 302
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIK-VPSQVK 185
G+ NI ++ PI+IDQ YCP C K S+V
Sbjct: 303 KGSTNGLRIKSYEDSKSPLVASKISYENIKMDDSGYPIIIDQKYCPNKLCTAKGDSSRVT 362
Query: 186 TSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+V F NI GTS ++K PC+ + + ++ Y+G N K T ++C+NV
Sbjct: 363 VKDVTFKNITGTSSTPEAVSLLCSDKKPCEGVTMSDVKIEYSGKNNK-----TMAVCTNV 417
Query: 236 KPTLFGKQIPATCV 249
K T G C
Sbjct: 418 KVTATGVDKANACA 431
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+++ GA DG D +KA E AW AC G K +++P G +L+ NF
Sbjct: 62 YDITKLGAKPDGKTDSTKAVEEAWASACGGTG-KQTIVIPKGDFLTGALNF 111
>gi|10185719|gb|AAG14416.1|AF248538_1 NTS1 protein [Nicotiana tabacum]
Length = 401
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 129/251 (51%), Gaps = 56/251 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ F + S+I + VD++ H+ I ++ ++++KITA DSPNT+G+HI +
Sbjct: 158 SLVFQTVRSSSIKNLNFVDAKGVHLKITDSSDISVSNIKITAPGDSPNTDGLHISDTINV 217
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ S I TGDDC+S+ GHGIS+GSLGK +++ +V G+TVRNCTF
Sbjct: 218 NVTDSTIGTGDDCISIGDGNSNVYISNINCGPGHGISIGSLGKRLDETDVKGVTVRNCTF 277
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
GT +I+ +NV+NPIVIDQ Y N+ PS+VK
Sbjct: 278 RGTTNGARIKTYMGSPSLQVSGVVYEDIILDNVKNPIVIDQHYHSKNR---NEPSRVKLV 334
Query: 188 NVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
++ F NIRGT+ +KI PC+ + + +I+ V GP + C N K
Sbjct: 335 DIHFRNIRGTTTSKIPVLLNCSEALPCEGVELVDIDL----APVGSIGPLLPATCQNAKT 390
Query: 238 TLFGKQIPATC 248
L GK P C
Sbjct: 391 ILNGKNNPPAC 401
>gi|399764476|gb|AFP50438.1| polygalacturonase 11a, partial [Medicago littoralis]
gi|399764478|gb|AFP50439.1| polygalacturonase 11a, partial [Medicago littoralis]
Length = 240
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 40/175 (22%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+++ FNF+N+S + G+ S DS+ FH+ + GC N+ + ITA DSPNT+GIH+G S
Sbjct: 66 FMNFGFNFVNNSLVHGVTSKDSKNFHVMVFGCNNITFDSFTITAPGDSPNTDGIHMGKST 125
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
G +I ++ I TGDDCVS+ GHG+SVGSLGK +E V G+T++NC
Sbjct: 126 GVKILNTNIGTGDDCVSIGDGSKQITVEGVKCGPGHGLSVGSLGKFTTEENVEGITIKNC 185
Query: 149 TFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIK 179
T T T +I NV+NP++IDQ YCP+N C+ K
Sbjct: 186 TLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKK 240
>gi|449452150|ref|XP_004143823.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449525056|ref|XP_004169536.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 392
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 136/271 (50%), Gaps = 61/271 (22%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
AC G V VP S+ FN+ N+ I+G+ S++SR H+ I GC N+ + ++K
Sbjct: 133 ACKTSGKNCPVGVP-----SMTFNWANNIVISGLTSINSRQTHLVINGCNNVVVRNVKAI 187
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A SPNT+GIH+ +S G I + TGDDCVS+ GHG+S+GSL
Sbjct: 188 APDQSPNTDGIHVQTSKGVTIIGCTLQTGDDCVSIGPGTYNLFMTNLKCGPGHGVSIGSL 247
Query: 132 GKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQ 168
GK + ++ V ++++N F+G+ NIV +NVENPIVIDQ
Sbjct: 248 GKELKEDGVQNISLKNSVFSGSDNGIRIKSWARPSKGFVRNIVFDNIVMDNVENPIVIDQ 307
Query: 169 LYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNG 218
YCP NK + S ++ S V + NIRGTSA PC +I + +I +Y
Sbjct: 308 NYCPDNKGCPRQNSGIRISKVTYRNIRGTSATPEAVSFDCSITNPCTDIKLQDIKLLY-- 365
Query: 219 VNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ +S C NV+ + G +P +C+
Sbjct: 366 -----KNKAASSSCRNVRGSSTGILMPRSCM 391
>gi|449453726|ref|XP_004144607.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 454
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/169 (46%), Positives = 95/169 (56%), Gaps = 40/169 (23%)
Query: 49 RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEI 108
RF+F+ +S + GI S+DS+ FH+NILGC NL + I A DSPNT+GIHIG S G I
Sbjct: 151 RFDFITNSIVRGITSLDSKNFHVNILGCNNLTFQGVNIIAPEDSPNTDGIHIGRSIGISI 210
Query: 109 SHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTG 152
S IATGDDC+SL GHGIS+GSLGK N+E V + V+NCT
Sbjct: 211 LKSRIATGDDCISLGDGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVDDVVVKNCTIMN 270
Query: 153 TN---------------IVTN---------NVENPIVIDQLYCPYNKCN 177
T I TN NV NPI+IDQ YCP+N+CN
Sbjct: 271 TTNGVRIKTWPSSPVAGIATNMHFSDITMVNVSNPILIDQEYCPWNQCN 319
>gi|42566075|ref|NP_191544.2| polygalacturonase [Arabidopsis thaliana]
gi|53749142|gb|AAU90056.1| At3g59850 [Arabidopsis thaliana]
gi|55167900|gb|AAV43782.1| At3g59850 [Arabidopsis thaliana]
gi|332646457|gb|AEE79978.1| polygalacturonase [Arabidopsis thaliana]
Length = 388
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 135/268 (50%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS P G SI F + I+G+ S++S+ FH+ I GC N+KL+ +K++A
Sbjct: 129 WSCKKSGKNCPSGA-TSIGFQSSRNVVISGLTSLNSQMFHVAINGCSNVKLDGVKVSADG 187
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ SS+ I +S I+TGDDCVS+ GHGIS+GSLGK
Sbjct: 188 NSPNTDGIHVQSSSTVSILNSKISTGDDCVSIGPGTNGLWIENVACGPGHGISIGSLGKE 247
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ V +TV+ TFTGT + V NNV+NPIVIDQ YC
Sbjct: 248 SVEVGVQNITVKTATFTGTENGVRIKSWARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYC 307
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P N+ S +K S+V F +I GTSA ++ PC I I ++ Y
Sbjct: 308 PGNENCPNQVSGIKISDVMFFDIHGTSATEVGVKLDCSSKKPCTGIRIQDVKLTYR---- 363
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
P TT CS+ + G Q P +C+
Sbjct: 364 --NKPATTD-CSHAGGSEAGFQRPNSCL 388
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKS-AVLVPPGKYL 46
+N+ +GA DG D +KAF W +AC +K +LVP G++L
Sbjct: 23 YNILSYGAKPDGKTDSTKAFTVLWAKAC--ASVKPVTILVPKGRFL 66
>gi|548493|sp|P35339.1|PGLR3_MAIZE RecName: Full=Exopolygalacturonase; Short=ExoPG; AltName:
Full=Galacturan 1,4-alpha-galacturonidase; AltName:
Full=Pectinase; Flags: Precursor
gi|288612|emb|CAA47052.1| polygalacturonase [Zea mays]
Length = 410
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++GI ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + PI+ID YCP C S+V
Sbjct: 283 KKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ KIPC + + ++N Y+G N K T ++C N K
Sbjct: 343 KDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNK-----TMAVCKNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSAKG 402
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGPLNF 90
>gi|162459708|ref|NP_001105862.1| exopolygalacturonase precursor [Zea mays]
gi|89892725|gb|ABD79096.1| Zea m 13 allergen [Zea mays]
gi|413943662|gb|AFW76311.1| exopolygalacturonase Precursor [Zea mays]
Length = 410
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++GI ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + PI+ID YCP C S+V
Sbjct: 283 KKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ KIPC + + ++N Y+G N K T ++C N K
Sbjct: 343 KDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNK-----TMAVCKNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSAKG 402
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGPLNF 90
>gi|399764490|gb|AFP50445.1| polygalacturonase 11a, partial [Medicago sativa subsp. caerulea]
Length = 240
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 104/192 (54%), Gaps = 44/192 (22%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G S V +++ FNF+N+S + G+ S DS+ FH+ + GC N+ + IT
Sbjct: 53 AAAWSGKNSNSKV----FMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTIT 108
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A DSPNT+GIH+G S +I ++ I TGDDCVS+ GHG+SVGSL
Sbjct: 109 APGDSPNTDGIHLGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSL 168
Query: 132 GKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVID 167
GK +E V G+T++NCT T T +I NV+NP++ID
Sbjct: 169 GKFTTEENVEGITIKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIID 228
Query: 168 QLYCPYNKCNIK 179
Q YCP+N+C+ K
Sbjct: 229 QEYCPWNQCSKK 240
>gi|449502091|ref|XP_004161540.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 458
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 133/264 (50%), Gaps = 59/264 (22%)
Query: 35 KSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPN 94
K L+P +SI+F+ LN + + GI S++S+ FH+++ CYN + ++ I A +SPN
Sbjct: 204 KDCQLLP----ISIKFSGLNHTIVDGITSLNSKGFHMSLFNCYNFTITNVNIIAPDESPN 259
Query: 95 TEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDE 138
T+GIH+ +S I +S+I TGDDCVS+ GHG+SVGSLGK ++
Sbjct: 260 TDGIHLSTSELVNIMNSIIGTGDDCVSIGHSTVKITVTNVTCGPGHGLSVGSLGKYSREK 319
Query: 139 EVVGLTVRNCT-FTGTN----------------------IVTNNVENPIVIDQLYCPYNK 175
+V + V+NCT F TN I+ NV+ PI+IDQ Y
Sbjct: 320 DVYDVLVKNCTIFNATNGARIKTFASPISGLASGIIFEDIIMYNVKYPIIIDQTY----S 375
Query: 176 CNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEG 225
+ S+ K S+V F NIRGTSA + PC+ + + +IN Y G + K
Sbjct: 376 TDENKESKWKVSDVHFKNIRGTSATNVGVLLECSKLLPCEGVVLKDINLTYGGTDSK--N 433
Query: 226 PETTSLCSNVKPTLFGKQIPATCV 249
S C N K T G Q P CV
Sbjct: 434 TTIVSSCLNAKITTIGVQNPPPCV 457
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VF+V GA ADG DD++AFET W AC +L+P G YL
Sbjct: 88 VFDVTKHGAKADGKTDDAQAFETTWIAACRNTVGPVKILIPKGTYL 133
>gi|399764480|gb|AFP50440.1| polygalacturonase 11a, partial [Medicago truncatula]
Length = 240
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 99/175 (56%), Gaps = 40/175 (22%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+++ FNF+N+S + G+ S DS+ FH+ + GC N+ + ITA DSPNT+GIH+G S
Sbjct: 66 FMNFGFNFVNNSLVHGVTSKDSKNFHVMVFGCNNITFDSFTITAPGDSPNTDGIHMGKST 125
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
G +I ++ I TGDDCVS+ GHG+S+GSLGK +E V G+T++NC
Sbjct: 126 GVKILNTNIGTGDDCVSIGDGSKQITVEGVKCGPGHGLSIGSLGKFTTEENVEGITIKNC 185
Query: 149 TFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIK 179
T T T +I NV+NP++IDQ YCP+N C+ K
Sbjct: 186 TLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIIDQEYCPWNACSKK 240
>gi|224117746|ref|XP_002331621.1| predicted protein [Populus trichocarpa]
gi|222874017|gb|EEF11148.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 130/258 (50%), Gaps = 58/258 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ N+ ITG+ S++S+ FHI I GC N+K+ +K++A +SPNT+GIH+
Sbjct: 147 PRGATSLEFSNSNNIAITGLASLNSQLFHIVIHGCQNVKVQGVKVSAAGNSPNTDGIHVQ 206
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS G I +S I TGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 207 SSTGVTILNSRIGTGDDCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGVQNVTV 266
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNK-CNIKVP 181
+ TFTGT + V NNV+NPIVIDQ YCP K C +V
Sbjct: 267 KTSTFTGTENGLRIKSWGRPSNGFARDILFQHAVMNNVQNPIVIDQNYCPGEKNCPGQV- 325
Query: 182 SQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSL 231
S VK S+V + +I G+SA K PC I + ++ Y N E +
Sbjct: 326 SGVKISDVTYQDIHGSSATEVAVKFDCSKKYPCTGIKLEDVKLTYK--NQPAE-----AS 378
Query: 232 CSNVKPTLFGKQIPATCV 249
CSN G P +C+
Sbjct: 379 CSNAGGVASGLVQPTSCL 396
>gi|413943675|gb|AFW76324.1| hypothetical protein ZEAMMB73_136411 [Zea mays]
Length = 245
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 125/242 (51%), Gaps = 55/242 (22%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
+F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G I+
Sbjct: 1 MDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITIT 60
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT T
Sbjct: 61 NTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT 120
Query: 154 ------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
NI + NPI ID YCP C S+V +V
Sbjct: 121 MFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDV 180
Query: 190 RFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
F NI GTS+ K+PC + + ++N Y+G N K T ++C+N K +
Sbjct: 181 TFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAKGST 235
Query: 240 FG 241
G
Sbjct: 236 KG 237
>gi|365769173|gb|AEW90949.1| polygalacturonase R2-7 [Secale cereale x Triticum durum]
Length = 415
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 128/254 (50%), Gaps = 56/254 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F +D+ I GI ++S++FH+NI C + + D+K++A DSPNT+GIH+G S+
Sbjct: 166 SLVLDFCDDALIEGISIINSKFFHMNIYECKGVTVKDVKVSAPGDSPNTDGIHMGDSSNV 225
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I + I GDDC+S+ GHGIS+GSLG+ ++++V +TV+NC
Sbjct: 226 SIIDTTIGVGDDCISIGPGTKQVNISGVTCGPGHGISIGSLGRYKDEKDVTDITVKNCVL 285
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS-QVK 185
G+ NI ++ PI+IDQ YCP C K S +V
Sbjct: 286 KGSTNGLRIKSYEDAKSPLIASKITYENIKMDDSGYPIIIDQKYCPNKLCTSKGDSARVT 345
Query: 186 TSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+V F NI GTS ++K PC+ I + ++ Y+G N K T ++C++
Sbjct: 346 VKDVTFKNITGTSSSPEAVSLLCSDKKPCEGITMSDVKIEYSGTNNK-----TMAVCTHA 400
Query: 236 KPTLFGKQIPATCV 249
K T G TC
Sbjct: 401 KVTATGVDKANTCA 414
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+++ GA DG D +K E AW AC G K +++P G +L+ NF
Sbjct: 45 YDIAKLGAKPDGKTDCTKEVEEAWASACGGTG-KQTIVIPKGDFLTGALNF 94
>gi|225460803|ref|XP_002276688.1| PREDICTED: exopolygalacturonase-like [Vitis vinifera]
Length = 405
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 128/253 (50%), Gaps = 51/253 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+R F+N + + I S+D++ HI+I C ++ L+D++ TA DSPNT+G+HI S
Sbjct: 154 SLRLEFVNHAWVHHIGSIDAKDKHISIFQCQDVTLSDIRTTAPHDSPNTDGVHIAVSERV 213
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+I S TGDDCV++ GHG S+GS+GK +++ + + +RNCT
Sbjct: 214 KILDSTFNTGDDCVAIFSGSKDVNISQSICGPGHGFSIGSMGKFPDEDPITKINIRNCTI 273
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
+ T +++ +NV NPI+IDQ YCP C+ V SQV+
Sbjct: 274 SHTDNGFRIKTWAVSSYPTFASDITVQDVMMDNVRNPIIIDQHYCPRGGCDPTVESQVQI 333
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
N++ I GTS +++ PCQ + + +I ++ P +S C+ V
Sbjct: 334 KNLQIKRIWGTSTTETAVNLQCSSQKPCQGVELEDILLLFRNPEGGKLQPAVSS-CAYVV 392
Query: 237 PTLFGKQIPATCV 249
+ GKQ+P C+
Sbjct: 393 GSSRGKQVPKPCI 405
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
V NVKD+GAVADG D+S+AF AW AC G S + VP G +R
Sbjct: 30 VLNVKDYGAVADGKTDNSRAFLEAWEAACEQQG-TSVITVPRGGKYYVR 77
>gi|224064462|ref|XP_002301488.1| predicted protein [Populus trichocarpa]
gi|222843214|gb|EEE80761.1| predicted protein [Populus trichocarpa]
Length = 353
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 124/221 (56%), Gaps = 52/221 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+ + + ++ + I SVDS+YFH+++ C ++ ++++ +TA A+SPNT+GIHI S+G
Sbjct: 108 SIKLSKVKNAFVHEISSVDSKYFHMHVTSCNSISIHNINLTAPANSPNTDGIHISHSDGV 167
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ S I TGDDCVS+ GHG+SVGSLGK N+E+V G+ V NCT
Sbjct: 168 HVTSSKIGTGDDCVSIGQGSTNILISQVFCGPGHGLSVGSLGKYKNEEDVRGIVVTNCTL 227
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +I ++V+NPI+IDQ Y C+++ PS+VK S
Sbjct: 228 FNTTNGVRIKSYAASDPSQALNITFKDITMDSVKNPIIIDQKYA--CSCSVQ-PSRVKIS 284
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNINWVYNG 218
NV + NI+GTS + +PCQ + I +I+ Y G
Sbjct: 285 NVHYQNIKGTSTSDVAVSFSCSSLVPCQGVEIVDIDLAYIG 325
>gi|413936200|gb|AFW70751.1| hypothetical protein ZEAMMB73_321863 [Zea mays]
Length = 413
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 124/253 (49%), Gaps = 55/253 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+ + I GI ++S++FH+NI C N+ ++ + + A DSPNT+GIHIG S+
Sbjct: 166 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 225
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS + I GDDC+S+ GHGISVGSLG+ ++++V + V CT
Sbjct: 226 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 285
Query: 151 TGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
GT I +NV PI+IDQ YCP N C S+V
Sbjct: 286 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAV 345
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++V F NI GTS AN +PCQ + + N++ YNG G +T ++C N
Sbjct: 346 NDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG-----SGNKTMAVCKNAI 400
Query: 237 PTLFGKQIPATCV 249
G C+
Sbjct: 401 GKSIGLAKELACI 413
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
++ GA DG D + AW+ AC G++ +++PPG YL+
Sbjct: 46 LDIAQLGAKGDGKSDSTPMILKAWKNACEATGVQK-IVIPPGNYLT 90
>gi|89892727|gb|ABD79097.1| Zea m 13 allergen [Zea mays]
Length = 404
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++GI ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 157 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 216
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 217 TITNTVIGVGDDCISIGPGTFKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 276
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + PI+ID YCP C S+V
Sbjct: 277 KKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTV 336
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ KIPC + + ++N Y+G N K T ++C N K
Sbjct: 337 KDVTFKNIPGTSSTPEAVNLLCSAKIPCTGVTMDDVNIKYSGTNNK-----TMAVCKNAK 391
Query: 237 PTLFG 241
+ G
Sbjct: 392 GSAKG 396
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L NF
Sbjct: 35 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGPLNF 84
>gi|15226644|ref|NP_181560.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4588005|gb|AAD25946.1|AF085279_19 hypothetical polygalacturonase [Arabidopsis thaliana]
gi|4586048|gb|AAD25666.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330254717|gb|AEC09811.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 404
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 132/260 (50%), Gaps = 56/260 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITASGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNMHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKNLTV 267
Query: 146 RNCTFTGT-------------------NIVTNNVE-----NPIVIDQLYCPYNKC--NIK 179
R+ F GT N V N++ PI IDQ YCP+ C K
Sbjct: 268 RDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHEQK 327
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ +++ NI GTS NK+ PC+NI + +IN NG +E +
Sbjct: 328 GESHVQIQDLKLKNIYGTSKNKVAMNLQCSKSFPCKNIELIDINIKSNG----LENSSSI 383
Query: 230 SLCSNVKPTLFGKQIPATCV 249
++C NV ++ GK +P C+
Sbjct: 384 AVCENVDGSMSGKMVPQHCL 403
>gi|413943663|gb|AFW76312.1| hypothetical protein ZEAMMB73_300465 [Zea mays]
Length = 410
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++GI ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + PI+ID YCP C S+V
Sbjct: 283 KKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ KIPC + + ++N Y+G N K T ++C N K
Sbjct: 343 KDVTFKNITGTSSTPEAVNLLCSAKIPCTGVTMDDVNINYSGTNNK-----TMAVCKNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSAKG 402
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGPLNF 90
>gi|297823961|ref|XP_002879863.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325702|gb|EFH56122.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 133/260 (51%), Gaps = 56/260 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + I A DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTIAAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKDLTV 267
Query: 146 RNCTFTGT-------------------NIVTNNVE-----NPIVIDQLYCPYNKC--NIK 179
R+ F GT N V N++ PI IDQ YCP+ C K
Sbjct: 268 RDIVFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHEKK 327
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ +++ NI GTS NK+ PC+N+ + +IN +NG +E +T
Sbjct: 328 GESHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKHNG----LEAGSST 383
Query: 230 SLCSNVKPTLFGKQIPATCV 249
++C NV ++ GK +P C+
Sbjct: 384 AVCENVDGSVRGKMVPQHCL 403
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ G+ DG D++ AF + W AC + +S + VP G +
Sbjct: 30 VFNVQRHGSKPDGKTDNANAFTSVWSRACRRESGRSKIYVPKGTF 74
>gi|413936196|gb|AFW70747.1| hypothetical protein ZEAMMB73_580033 [Zea mays]
Length = 435
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 124/253 (49%), Gaps = 55/253 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+ + I GI ++S++FH+NI C N+ ++ + + A DSPNT+GIHIG S+
Sbjct: 188 SLVLDFVTNVQIRGITLLNSKFFHLNIFECKNVLIDKVTVKAPGDSPNTDGIHIGDSSNV 247
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS + I GDDC+S+ GHGISVGSLG+ ++++V + V CT
Sbjct: 248 TISSTTIGVGDDCISIGPGSKMIRIHGVKCGPGHGISVGSLGRYKDEKDVEDVQVTGCTI 307
Query: 151 TGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
GT I +NV PI+IDQ YCP N C S+V
Sbjct: 308 AGTTNGLRIKSYEDSKSSLKASKFLYEGITMDNVSYPIIIDQKYCPNNICVKSGASKVAV 367
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++V F NI GTS AN +PCQ + + N++ YNG G +T ++C N
Sbjct: 368 NDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLVNVDIKYNG-----SGNKTMAVCKNAI 422
Query: 237 PTLFGKQIPATCV 249
G C+
Sbjct: 423 GKSIGLAKELACI 435
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
++ GA DG D + AW+ AC G++ +++PPG YL+
Sbjct: 68 LDIAQLGAKGDGKSDSTPMILKAWKNACEATGVQK-IVIPPGNYLT 112
>gi|51507375|emb|CAH18935.1| polygalacturonase [Pyrus communis]
Length = 398
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 122/236 (51%), Gaps = 50/236 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WD S P G ++ F+ N+ ++G+ S++S+ FHI + GC N+K+ +K+ A
Sbjct: 139 WDCKSSGKSCPSGA-TTLSFSNSNNVVVSGLISLNSQMFHIVVNGCQNVKMQGVKVNAAG 197
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S+G I S I+TGDDCVS+ GHGIS+GSLGK
Sbjct: 198 NSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISIGSLGKD 257
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ V +TV+ TFTGT +IV NV+NPIVIDQ YC
Sbjct: 258 QQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQNPIVIDQNYC 317
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYN 217
P +K S VK S+V + +I GTSA ++ PC I + ++ YN
Sbjct: 318 PNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLTYN 373
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYL 46
F+V GA ADG D +KAF +AW AC + AV+ VP G++L
Sbjct: 34 FSVSSLGAKADGSTDSTKAFLSAWSNAC--ASVNPAVIYVPAGRFL 77
>gi|356501890|ref|XP_003519756.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Glycine max]
Length = 416
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 126/254 (49%), Gaps = 59/254 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S++F +N+S +T I S++S FH +I GC N L+++ ITA +SPNT+G+HI SS+
Sbjct: 170 SLKFAKVNNSIVTDITSLNSMQFHFHIHGCSNFSLSNINITAPGNSPNTDGMHISSSDSI 229
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ SVI TGDDC+S+ GHGISVGSLGK + V G++V NCTF
Sbjct: 230 KVFDSVIGTGDDCISIGHSTTNIAITNITCGPGHGISVGSLGKRPEERSVNGISVTNCTF 289
Query: 151 TGTN-----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T ++ V+NPI+IDQ Y NK S K S
Sbjct: 290 VNTTNGARIKTWMGTVPAEATNITYEGLIMKGVQNPIIIDQSYG-SNKKTTPSTSVWKIS 348
Query: 188 NVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSL---CSN 234
N+ F I+GT+ + I PC+ + I +++ Y+G GP T+ CSN
Sbjct: 349 NIHFRKIQGTTVSNIAVSLQCSTSNPCEGVEIADVDLAYSG------GPHNTTFVSSCSN 402
Query: 235 VKPTLFGKQIPATC 248
K G P C
Sbjct: 403 AKAVFGGILNPPAC 416
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+F+V FGAVAD D+ AF AW EAC ++ VL+P G + + + F
Sbjct: 44 IFDVTKFGAVADDQTDNIDAFRAAWGEACKNSTTQAKVLIPAGTFRAAQTMF 95
>gi|2605891|gb|AAC28947.1| polygalacturonase [Solanum lycopersicum]
Length = 395
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 133/264 (50%), Gaps = 55/264 (20%)
Query: 35 KSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPN 94
KS+ P ++ F+ N+ +ITG+ S++S+ FHI I GC N+KL +K+ A +SPN
Sbjct: 138 KSSTKNCPRGATTLGFSNSNNVSITGLTSLNSQMFHIVINGCKNVKLQGVKVYAPGESPN 197
Query: 95 TEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDE 138
T+GIH+ S+ I +S+I+TGDDCVS+ GHGIS+GSL K +
Sbjct: 198 TDGIHVQLSSDISILNSIISTGDDCVSIGPGTSNLWIQNVACGPGHGISIGSLAKDFEEA 257
Query: 139 EVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNK 175
V +TV++ F T ++ +VENPIVIDQ YCPYNK
Sbjct: 258 GVQNVTVKSVMFMNTQNGVRIKTWGRPSTGFVNNVLFQHVAMIDVENPIVIDQNYCPYNK 317
Query: 176 CNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEG 225
S VK S+V + +I G+SA ++ PC+ I + ++N Y
Sbjct: 318 NCPGQVSGVKVSDVTYQDIHGSSATRVAMKFDCSKRNPCKGIKLEDVNLSYK------NE 371
Query: 226 PETTSLCSNVKPTLFGKQIPATCV 249
P + CSNV T G P +C+
Sbjct: 372 PAAEASCSNVAGTTTGVIQPTSCL 395
>gi|125581161|gb|EAZ22092.1| hypothetical protein OsJ_05753 [Oryza sativa Japonica Group]
Length = 250
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 55/239 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ ++ + T+ GI +S++FH+NI N+ ++ + IT+ DSPNT+GIH+G S
Sbjct: 3 SLVIDYSTNVTVRGITLKNSKFFHLNIYESKNVVIDKVTITSPGDSPNTDGIHVGDSTNI 62
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS + IA GDDC+S+ GHGISVGSLG+ ++++V + V NCT
Sbjct: 63 TISSTTIAAGDDCISIGPGTKMVRVNGVRCGPGHGISVGSLGRYKDEKDVEDIIVTNCTI 122
Query: 151 TGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
GT I +NV PI+IDQ YCP N C+ S+V
Sbjct: 123 KGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYPIIIDQKYCPNNICSASGTSKVAV 182
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+++ F NI GTS AN +PCQ I + N++ Y G +G T S+C NV
Sbjct: 183 TDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVDLKYAG-----QGNTTLSVCKNV 236
>gi|354549145|gb|AER27668.1| polygalacturonase [Pyrus pyrifolia]
gi|354549147|gb|AER27669.1| polygalacturonase [Pyrus pyrifolia]
Length = 398
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 122/236 (51%), Gaps = 50/236 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WD S P G ++ F+ N+ ++G+ S++S+ FHI + GC N+K+ +K+ A
Sbjct: 139 WDCKSSGKSCPSGA-TTLSFSNSNNVVVSGLISLNSQMFHIVVNGCQNVKMQGVKVNAAG 197
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S+G I S I+TGDDCVS+ GHGIS+GSLGK
Sbjct: 198 NSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISIGSLGKD 257
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ V +TV+ TFTGT +I+ NV+NPIVIDQ YC
Sbjct: 258 QQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIIMTNVQNPIVIDQNYC 317
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYN 217
P +K S VK S+V + +I GTSA ++ PC I + ++ YN
Sbjct: 318 PNDKGCPGQASGVKVSDVTYQDIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLTYN 373
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYL 46
F+V GA ADG D +KAF +AW AC + AV+ VP G++L
Sbjct: 34 FSVSSLGAKADGSTDSTKAFLSAWSNAC--ASVNPAVIYVPAGRFL 77
>gi|218190250|gb|EEC72677.1| hypothetical protein OsI_06235 [Oryza sativa Indica Group]
Length = 384
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 55/239 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ ++ + T+ GI +S++FH+NI N+ ++ + IT+ DSPNT+GIH+G S
Sbjct: 137 SLVIDYSTNVTVRGITLKNSKFFHLNIYESKNVVIDKVTITSPGDSPNTDGIHVGDSTNI 196
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS + IA GDDC+S+ GHGISVGSLG+ ++++V + V NCT
Sbjct: 197 TISSTTIAAGDDCISIGPGTKMVRVNGVRCGPGHGISVGSLGRYKDEKDVEDIIVTNCTI 256
Query: 151 TGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
GT I +NV PI+IDQ YCP N C+ S+V
Sbjct: 257 KGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYPIIIDQKYCPNNICSASGTSKVAV 316
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+++ F NI GTS AN +PCQ I + N++ Y G +G T S+C NV
Sbjct: 317 TDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVDLKYAG-----QGNTTLSVCKNV 370
>gi|426204259|gb|AFY12686.1| polygalacturonase 11c, partial [Medicago sauvagei]
Length = 240
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 102/192 (53%), Gaps = 44/192 (22%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G KS V +++ FNF+N+S + I S DS+ FH+ +LGC N + IT
Sbjct: 53 AAAWSGKKSNSKV----FMNFGFNFVNNSIVRDITSKDSKNFHVMVLGCNNFTFDGFTIT 108
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A DSPNT+GIH+G S +I ++ I TGDDC L GHGISVGSL
Sbjct: 109 APGDSPNTDGIHMGRSTDVKILNTNIGTGDDCXXLGDGSKQITVQNVHCGPGHGISVGSL 168
Query: 132 GKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVID 167
GK ++ V G+TV+NCT T T +I NV+NPI+ID
Sbjct: 169 GKFTTEQNVEGVTVKNCTLTATDNGVRINTWPDAPGTITVSDIHFEDITMTNVKNPIIID 228
Query: 168 QLYCPYNKCNIK 179
Q YCP+N+C+ K
Sbjct: 229 QEYCPWNQCSKK 240
>gi|399764484|gb|AFP50442.1| polygalacturonase 11a, partial [Medicago rigiduloides]
Length = 240
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 44/192 (22%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G S V +++ FNF+N+S + G+ S DS+ FH+ + GC N+ + +T
Sbjct: 53 AAAWSGKSSNSKV----FMNFGFNFVNNSMVRGVTSKDSKNFHVMVFGCNNITFDGFTVT 108
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A DSPNT+GIH+G S +I ++ I TGDDC+S+ GHG+S+GSL
Sbjct: 109 APGDSPNTDGIHMGKSTDVKILNTNIGTGDDCISIGDGSKQITVQGVNCGPGHGLSIGSL 168
Query: 132 GKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVID 167
GK +E V G+T++NCT T T +I NV+NP++ID
Sbjct: 169 GKFTTEENVEGITIKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIID 228
Query: 168 QLYCPYNKCNIK 179
Q YCP+N+C+ K
Sbjct: 229 QEYCPWNQCSKK 240
>gi|225216943|gb|ACN85237.1| exopolygalacturonase precursor [Oryza minuta]
Length = 422
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 124/240 (51%), Gaps = 55/240 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ N +N+ + GI +++++FH+NI C ++ + + ITA +SPNT+GIHIG S+
Sbjct: 175 TLVLNTVNNGLVAGITLLNAKFFHMNIYRCKDVTIRGVTITAPEESPNTDGIHIGDSSKI 234
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ ++I TGDDC+S+ GHGIS+GSLG+ ++ +V+ +TV C
Sbjct: 235 NIADTIIGTGDDCISIGPGSDKINITGVTCGPGHGISIGSLGRYKDERDVMDVTVNRCVL 294
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T N+V +NV NPI+IDQ YCP + C K S+V
Sbjct: 295 RKTTNGLRIKSYEDAVSPVTVSKVAFENVVMDNVANPIIIDQKYCPNSICTSKGDSKVSV 354
Query: 187 SNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTSA +K+PC + + ++ Y G + K T ++C N +
Sbjct: 355 KDVTFKNITGTSATPEAVQLLCSDKLPCSGVAMHDVRVKYGGSDKK-----TMAVCDNAQ 409
>gi|224064464|ref|XP_002301489.1| predicted protein [Populus trichocarpa]
gi|222843215|gb|EEE80762.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 122/226 (53%), Gaps = 53/226 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+ + + ++ + I SVDS+YFH+++ C ++ ++++ +TA A+SPNT+GIHI S+G
Sbjct: 169 SIKLSKVKNAFVHEISSVDSKYFHMHVTSCNSISIHNINLTAPANSPNTDGIHISHSDGV 228
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ S I TGDDC+S+ GHG+SVGSLGK N+E+V G+ V NCT
Sbjct: 229 HVTSSKIGTGDDCISIGQGSTNILISQVFCGPGHGLSVGSLGKYKNEEDVRGIVVTNCTL 288
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +I ++V+NPI+IDQ Y N PS+VK S
Sbjct: 289 FNTTNGVRIKSYAASDPSQALNITFKDITMDSVKNPIIIDQKYGSRN----GAPSRVKIS 344
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKV 223
NV + NI+GTS + +PCQ + + +I+ Y G V
Sbjct: 345 NVHYQNIKGTSTSDVAVSFSCSSLVPCQGVELVDIDLAYIGQKANV 390
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
VF+V GA AD D+++AF WR AC+ G + +++P G +L+
Sbjct: 45 VFDVTKHGAKADDKTDNAEAFIQTWRAACD-SGAPAKMVIPGGTFLT 90
>gi|4335713|gb|AAD17391.1| putative polygalacturonase [Arabidopsis thaliana]
gi|20197929|gb|AAM15317.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 402
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 54/258 (20%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + +IS + I TGDDC+++ GHGISVGSLGK ++++ L V
Sbjct: 208 SCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDAKDLIV 267
Query: 146 RNCTFTGT-------------------NIVTNNVE-----NPIVIDQLYCPYNKCNIKVP 181
R+ F GT N V N++ PI IDQ YCP+ C +
Sbjct: 268 RDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERK 327
Query: 182 SQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSL 231
S V+ N++ NI GTS NK+ PC+N+ + +IN NG V+ +TS+
Sbjct: 328 SHVQIQNLKLKNIYGTSKNKVAMNLQCSKIFPCKNVELIDINIKQNG----VKDGSSTSV 383
Query: 232 CSNVKPTLFGKQIPATCV 249
C NV GK P C+
Sbjct: 384 CENVDGFARGKMFPQHCL 401
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ GA DG D++ AF + W AC S + VP G +
Sbjct: 30 VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTF 74
>gi|224109146|ref|XP_002333303.1| predicted protein [Populus trichocarpa]
gi|222835934|gb|EEE74355.1| predicted protein [Populus trichocarpa]
Length = 326
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 102/177 (57%), Gaps = 39/177 (22%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G +++RF+F+ ++ + I ++DS+ FH+N+LGC NL + A +S NT+GIHIG
Sbjct: 144 GLPMNLRFDFITNALVRDITTLDSKNFHVNVLGCKNLTFQHFTVRAPGESVNTDGIHIGR 203
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S G I S I+TGDDC+S+ GHGISVGSLGK N++ V G+ V+
Sbjct: 204 STGIYIIDSKISTGDDCISVGDGTEELHITGVTCGPGHGISVGSLGKYPNEKPVSGIFVK 263
Query: 147 NCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKV 180
NCT + T +IV NNV+NP++IDQ YCP+N+C +KV
Sbjct: 264 NCTISDTTNGVRIKSWPALYGGVASNMHFEDIVMNNVQNPVIIDQGYCPWNQCTLKV 320
>gi|15224380|ref|NP_181915.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
gi|2281083|gb|AAB64019.1| putative polygalacturonase [Arabidopsis thaliana]
gi|91806353|gb|ABE65904.1| polygalacturonase/pectinase [Arabidopsis thaliana]
gi|330255244|gb|AEC10338.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
Length = 384
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 126/241 (52%), Gaps = 51/241 (21%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A WD KS P G +I F ++ ++G+ S++S+ FH+ I GC N+KL +K
Sbjct: 122 RGASLWDCKKSGKNCPSGA-TTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVK 180
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+ A +SPNT+GIH+ SS+ I ++ I+TGDDCVS+ GHGIS+G
Sbjct: 181 VLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIG 240
Query: 130 SLGKGINDEEVVGLTVRNCTFTGTN-----------------------IVTNNVENPIVI 166
SLGK + V +TV+ TFTGT+ V NNVENPI+I
Sbjct: 241 SLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIII 300
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YCP + C +V S +K S+V F +I GTSA ++ PC I + ++ Y
Sbjct: 301 DQNYCPDHDCPRQV-SGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTY 359
Query: 217 N 217
Sbjct: 360 Q 360
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFN 51
+NV FGA DG D +KAF W+ AC ++VP G++L S+ F+
Sbjct: 21 YNVLSFGAKPDGKTDATKAFMAVWQTACA-SSRPVTIVVPKGRFLLRSVTFD 71
>gi|116831160|gb|ABK28534.1| unknown [Arabidopsis thaliana]
Length = 385
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 126/241 (52%), Gaps = 51/241 (21%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A WD KS P G +I F ++ ++G+ S++S+ FH+ I GC N+KL +K
Sbjct: 122 RGASLWDCKKSGKNCPSGA-TTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVK 180
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+ A +SPNT+GIH+ SS+ I ++ I+TGDDCVS+ GHGIS+G
Sbjct: 181 VLAAGNSPNTDGIHVQSSSSVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIG 240
Query: 130 SLGKGINDEEVVGLTVRNCTFTGTN-----------------------IVTNNVENPIVI 166
SLGK + V +TV+ TFTGT+ V NNVENPI+I
Sbjct: 241 SLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIII 300
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YCP + C +V S +K S+V F +I GTSA ++ PC I + ++ Y
Sbjct: 301 DQNYCPDHDCPRQV-SGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTY 359
Query: 217 N 217
Sbjct: 360 Q 360
Score = 38.1 bits (87), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFN 51
+NV FGA DG D +KAF W+ AC ++VP G++L S+ F+
Sbjct: 21 YNVLSFGAKPDGKTDATKAFMAVWQTACA-SSRPVTIVVPKGRFLLRSVTFD 71
>gi|296083401|emb|CBI23356.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 124/257 (48%), Gaps = 54/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ I G+ S++S+ FHI I GC N++L + I A +SPNT+GIH+
Sbjct: 139 PSGATTLSFTNSNNIMIKGMLSLNSQMFHIVINGCSNVRLQGVNIIASGNSPNTDGIHVQ 198
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S I S I TGDDC+S+ GHGIS+GSL K + +E V +TV
Sbjct: 199 RSTNIAIIRSTIRTGDDCISIGPGTKNLWMEGIECGPGHGISIGSLAKDLEEEGVQNVTV 258
Query: 146 RNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+N FTGT + +NV++PIVIDQ YCP+N+ S
Sbjct: 259 KNAAFTGTQNGLRIKSWARASTGFVKGVHFEGVTMDNVQSPIVIDQNYCPHNQGCPSQES 318
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
VK S+V + IRGTSA K+ PC ++ + ++ Y E + C
Sbjct: 319 GVKVSDVTYKGIRGTSATKVAVKFDCSAANPCTSLRLEDVKLTYTN-----EDQVAQASC 373
Query: 233 SNVKPTLFGKQIPATCV 249
SN +G P +C+
Sbjct: 374 SNANGKAYGLVQPNSCL 390
>gi|297813385|ref|XP_002874576.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297320413|gb|EFH50835.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 132/260 (50%), Gaps = 56/260 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKDLTV 267
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKC--NIK 179
R+ F GT NI +V PI IDQ YCP+ C K
Sbjct: 268 RDIVFNGTSDGIRIKTWESSASKILVSNFMYENIQMIDVGKPINIDQKYCPHPPCEHEKK 327
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ +++ NI GTS NK+ PC+N+ + +IN NG +E +T
Sbjct: 328 GESHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKNNG----LEDGSST 383
Query: 230 SLCSNVKPTLFGKQIPATCV 249
++C NV ++ GK +P C+
Sbjct: 384 AVCENVDGSVRGKMVPQHCL 403
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ G+ DG D++ AF + W AC + +S + VP G +
Sbjct: 30 VFNVQRHGSKPDGKTDNANAFTSVWSRACRRESGRSKIYVPKGTF 74
>gi|147861610|emb|CAN83578.1| hypothetical protein VITISV_027614 [Vitis vinifera]
Length = 391
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 155/363 (42%), Gaps = 116/363 (31%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYLS------------ 47
V NVKD+GAVADG D+S+AF AW AC G S + VP G KY
Sbjct: 31 VLNVKDYGAVADGKTDNSRAFLEAWEAACEQQG-TSVITVPRGGKYYVRQVAFTGPCKGS 89
Query: 48 -----------------------IRFNFLNDSTITGIKSV-------------------- 64
I+F +++ TI G+ ++
Sbjct: 90 ITFLIQADLYAPTDKSSHTLTYWIKFGYVDYLTIAGLANLYGGGPSAWPYKGCGQGQECL 149
Query: 65 -----DSRYFHINILGCYNLK---LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG 116
D I+ N++ L+D++ TA DSPNT+G+HI S +I S TG
Sbjct: 150 QVVPHDQSMLKISTSAYSNVQDVTLSDIRTTAPHDSPNTDGVHIAVSERVKILDSTFNTG 209
Query: 117 DDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------- 153
DDCV++ GHG S+GS+GK +++ + + +RNCT + T
Sbjct: 210 DDCVAIFSGSKDVNISRSICGPGHGFSIGSMGKFPDEDPITKINIRNCTISHTDNGFRIK 269
Query: 154 -----------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRG 196
+++ +NV NPI+IDQ YCP C+ V SQV+ N++ I G
Sbjct: 270 TWAVSSYPTFASDITVQDVMMDNVRNPIIIDQHYCPRGGCDPTVESQVQIKNLQIKRIWG 329
Query: 197 TS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA 246
TS +++ PCQ + + +I ++ P +S C+ V + GKQ+P
Sbjct: 330 TSTTETAVNLQCSSQKPCQGVELEDILLLFRNPEGGELQPAVSS-CAYVVGSSRGKQVPK 388
Query: 247 TCV 249
C+
Sbjct: 389 PCI 391
>gi|115444829|ref|NP_001046194.1| Os02g0196700 [Oryza sativa Japonica Group]
gi|113535725|dbj|BAF08108.1| Os02g0196700 [Oryza sativa Japonica Group]
Length = 449
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 55/239 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ ++ + T+ GI +S++FH+NI N+ ++ + IT+ DSPNT+GIH+G S
Sbjct: 202 SLVIDYSTNVTVRGITLKNSKFFHLNIYESKNVVIDKVTITSPGDSPNTDGIHVGDSTNI 261
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS + IA GDDC+S+ GHGISVGSLG+ ++++V + V NCT
Sbjct: 262 TISSTTIAAGDDCISIGPGTKMVRVNGVRCGPGHGISVGSLGRYKDEKDVEDIIVTNCTI 321
Query: 151 TGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
GT I +NV PI+IDQ YCP N C+ S+V
Sbjct: 322 KGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYPIIIDQKYCPNNICSASGTSKVAV 381
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+++ F NI GTS AN +PCQ I + N++ Y G +G T S+C NV
Sbjct: 382 TDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVDLKYAG-----QGNTTLSVCKNV 435
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
++ GA DG D + AW+ ACN G + +++PPG YL+ N T + I
Sbjct: 82 LDIAQLGAKGDGTSDSTAFVLQAWKNACNATGTQK-IVIPPGNYLTGALNLKGPCTSSII 140
Query: 62 KSVDSRYFHINILGCY 77
+D L Y
Sbjct: 141 LRLDGNLLGTGDLNAY 156
>gi|15220597|ref|NP_172057.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|4836916|gb|AAD30618.1|AC007153_10 putative polygalacturonase [Arabidopsis thaliana]
gi|332189751|gb|AEE27872.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 394
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 129/268 (48%), Gaps = 56/268 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS PPG SI FN D I+G+KS++S+ H+ + GC N+ + ++K+ A
Sbjct: 132 WSCRKSGQNCPPG-VRSISFNSAKDVIISGVKSMNSQVTHMTLNGCTNVVVRNVKLVAPG 190
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+G H+ S G + S + TGDDCV++ GHG+S+GSL K
Sbjct: 191 NSPNTDGFHVQHSTGVTFTGSTVQTGDDCVAIGPGTRNLLITKLACGPGHGVSIGSLAKE 250
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ ++ V +TV + FTG+ ++V NVENPI+IDQ YC
Sbjct: 251 LKEDGVENVTVSSSVFTGSQNGVRIKSWARPSNGFVRTVFFQDLVMKNVENPIIIDQNYC 310
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNV 221
P ++ S VK S V + NI+GTSA + PC I + +I YN
Sbjct: 311 PTHEGCPNEYSGVKISQVTYKNIQGTSATQEAMKLVCSKSSPCTGITLQDIKLTYN---- 366
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
+G TS C N G P +C+
Sbjct: 367 --KGTPATSFCFNAVGKSLGVIQPTSCL 392
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV FGA DG+ D + AF AW+ AC + V+VP G +L
Sbjct: 27 VFNVVSFGAKPDGVTDSTGAFLKAWQGAC-VSASSATVVVPKGTFL 71
>gi|49388133|dbj|BAD25264.1| putative exopolygalacturonase precursor [Oryza sativa Japonica
Group]
gi|49388149|dbj|BAD25277.1| putative exopolygalacturonase precursor [Oryza sativa Japonica
Group]
Length = 422
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 122/239 (51%), Gaps = 55/239 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ ++ + T+ GI +S++FH+NI N+ ++ + IT+ DSPNT+GIH+G S
Sbjct: 175 SLVIDYSTNVTVRGITLKNSKFFHLNIYESKNVVIDKVTITSPGDSPNTDGIHVGDSTNI 234
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS + IA GDDC+S+ GHGISVGSLG+ ++++V + V NCT
Sbjct: 235 TISSTTIAAGDDCISIGPGTKMVRVNGVRCGPGHGISVGSLGRYKDEKDVEDIIVTNCTI 294
Query: 151 TGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
GT I +NV PI+IDQ YCP N C+ S+V
Sbjct: 295 KGTTNGLRIKSYEDSKSQLRATKFLYDGITMDNVSYPIIIDQKYCPNNICSASGTSKVAV 354
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+++ F NI GTS AN +PCQ I + N++ Y G +G T S+C NV
Sbjct: 355 TDIVFKNIVGTSATPEAVTLNCANNLPCQGIQLHNVDLKYAG-----QGNTTLSVCKNV 408
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
++ GA DG D + AW+ ACN G + +++PPG YL+ N T + I
Sbjct: 55 LDIAQLGAKGDGTSDSTAFVLQAWKNACNATGTQK-IVIPPGNYLTGALNLKGPCTSSII 113
Query: 62 KSVDSRYFHINILGCY 77
+D L Y
Sbjct: 114 LRLDGNLLGTGDLNAY 129
>gi|399764486|gb|AFP50443.1| polygalacturonase 11a, partial [Medicago rigidula]
Length = 240
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 44/192 (22%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G S V +++ FNF+N+S + G+ S DS+ FH+ + GC N+ + +T
Sbjct: 53 AAAWSGKGSNSKV----FMNFGFNFVNNSMVRGVTSKDSKNFHVMVFGCNNITFDGFTVT 108
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A DSPNT+GIH+G S +I ++ I TGDDC+S+ GHG+S+GSL
Sbjct: 109 APGDSPNTDGIHMGKSTDVKILNTNIGTGDDCISIGDGSKQITVQGVNCGPGHGLSIGSL 168
Query: 132 GKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVID 167
GK +E V G+T++NCT T T +I NV+NP++ID
Sbjct: 169 GKFTTEENVEGITIKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIID 228
Query: 168 QLYCPYNKCNIK 179
Q YCP+N+C+ K
Sbjct: 229 QEYCPWNQCSKK 240
>gi|119507453|dbj|BAF42034.1| polygalacturonase3 [Pyrus communis]
Length = 398
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 121/236 (51%), Gaps = 50/236 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WD S P G ++ F+ N+ ++G+ S++S+ FHI + GC N+K+ +K+ A
Sbjct: 139 WDCKSSGKSCPSGA-TTLSFSNSNNIVVSGLISLNSQMFHIVVNGCQNVKMQGVKVNAAG 197
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S+G I S I+TGDDCVS+ GHGIS+GSLGK
Sbjct: 198 NSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISIGSLGKD 257
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ V +TV+ TFTGT +IV NV+NPIVIDQ YC
Sbjct: 258 QQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQNPIVIDQNYC 317
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYN 217
P +K S VK S+V + I GTSA ++ PC I + ++ YN
Sbjct: 318 PNDKGCPGQASGVKVSDVTYQGIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLTYN 373
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYL 46
F+V GA ADG D +KAF +AW AC + AV+ VP G++L
Sbjct: 34 FSVSSLGAKADGSTDSTKAFLSAWSNAC--ASVNPAVIYVPAGRFL 77
>gi|224117798|ref|XP_002331634.1| predicted protein [Populus trichocarpa]
gi|222874030|gb|EEF11161.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 131/268 (48%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS P G SI FN+ ND I+G+ S++S+ H+ I C N+ + ++++ A
Sbjct: 131 WACRKSGQNCPVGAR-SITFNWANDILISGLTSINSQSMHLVINSCNNVLVRNVRVIAPD 189
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
SPNT+GIH+ +S G I+ S + TGDDC+S+ GHGIS+GSLGK
Sbjct: 190 QSPNTDGIHVQTSTGVTITGSTLQTGDDCISIGPSTRNMLMSSIKCGPGHGISIGSLGKD 249
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
N+ V +T+ N F+G+ N++ NV NPI++DQ YC
Sbjct: 250 FNEGGVENITLTNSIFSGSDNGVRIKSWARPSNGFVRNVVFQNLIMKNVRNPIIVDQNYC 309
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P N+ + S VK S V + NI+GTSA+ PC+ I + +I Y
Sbjct: 310 PNNQGCPRQSSGVKISQVTYRNIQGTSASPEAVTFDCSSSNPCRGIKLQDIKLTYMNT-- 367
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
TS C N+ T G +P +C+
Sbjct: 368 -----AATSSCKNIGGTSSGVLMPESCI 390
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV FGA DG D ++ F AW AC S + VP G+YL
Sbjct: 27 YNVIKFGAKPDGKTDSTQPFLKAWSAACG-SASPSTINVPKGRYL 70
>gi|226502274|ref|NP_001141808.1| uncharacterized protein LOC100273946 precursor [Zea mays]
gi|194706004|gb|ACF87086.1| unknown [Zea mays]
gi|413926246|gb|AFW66178.1| hypothetical protein ZEAMMB73_043712 [Zea mays]
Length = 418
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/253 (34%), Positives = 126/253 (49%), Gaps = 55/253 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+ ++ I GI ++S++FH+NI G N+ ++ + I A +SPNT+GIHIG S+
Sbjct: 171 SLVLDFVTNAQIRGITLLNSKFFHMNIFGSKNVVIDKVTIKAPGNSPNTDGIHIGDSSNV 230
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS + IA GDDCVS+ GHGISVGSLG+ ++++V + V CT
Sbjct: 231 TISGTTIAVGDDCVSIGPGSKTIRVKGVKCGPGHGISVGSLGRYKDEKDVEDVKVTGCTL 290
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
GT ++ +NV PI+IDQ YCP N C S+V
Sbjct: 291 AGTTNGLRIKSYEDSKSSLKATKFLYQDVTMDNVSYPIIIDQKYCPNNICVKSGASKVAV 350
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++V F NI GTS AN +PCQ + + N++ YN + K T S+C N
Sbjct: 351 NDVVFKNIHGTSNTPEAITLNCANNLPCQGVQLINVDIKYNRSDNK-----TMSVCKNAI 405
Query: 237 PTLFGKQIPATCV 249
G CV
Sbjct: 406 GKSIGMAKELACV 418
>gi|357442427|ref|XP_003591491.1| Polygalacturonase [Medicago truncatula]
gi|355480539|gb|AES61742.1| Polygalacturonase [Medicago truncatula]
Length = 407
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 130/252 (51%), Gaps = 54/252 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S++F+ + ++ + + S++S FH ++ GC N+ +L ITA +SPNT+G+HI SS+
Sbjct: 160 SLKFDKIKNAIVQDVTSLNSMQFHFHLHGCSNISFTNLHITAPGNSPNTDGMHISSSDFI 219
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+++SVIATGDDC+S+ GHGISVGSLGK ++ V G++V+NCTF
Sbjct: 220 TVTNSVIATGDDCISVGHSTSNITISGITCGPGHGISVGSLGKRPEEKTVNGVSVKNCTF 279
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
G+ +++ +V+NPIVIDQ Y K + S K S
Sbjct: 280 IGSTNGARIKTWIGTAPAEAKNIVYEDLIMKDVQNPIVIDQSY--GKKERVPSTSVWKIS 337
Query: 188 NVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
+ F I+GT+ + I PC+NI + ++ Y G + P S C N K
Sbjct: 338 DAHFRRIKGTTVSNIPVSLQCSSKNPCENIEVADVELTYVGPQKSI--PFANS-CINAKA 394
Query: 238 TLFGKQIPATCV 249
GK PA CV
Sbjct: 395 IFGGKLNPAACV 406
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
+++V FGAVADG D+ + AW+ AC + + VL+P G +++
Sbjct: 34 IYDVTKFGAVADGKTDNVEKIRAAWQAACKTSTVPATVLIPAGTFVT 80
>gi|224107092|ref|XP_002314373.1| predicted protein [Populus trichocarpa]
gi|222863413|gb|EEF00544.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 120/221 (54%), Gaps = 54/221 (24%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+FN + + I I SV+ FHI+I+ N+K +L+I A +DSPNT+GIHI +N
Sbjct: 104 SIKFNHVVNGIIRQITSVNPMGFHISIVLSQNIKAKNLRIFAPSDSPNTDGIHISQTNQV 163
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+S+SVI TGDDC+ + GHGIS+GSLGK ++E+V G+TV+NCT
Sbjct: 164 YVSNSVIGTGDDCIGIIRGCTDVHIRNVTCGPGHGISIGSLGKYQDEEDVRGITVKNCTL 223
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +IV V+NPI+IDQ Y N + S+V+ S
Sbjct: 224 NNTDNGIRIKTYGGSPPSQASGILFQDIVMVRVKNPIIIDQSY-----GNKESASRVRLS 278
Query: 188 NVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNG 218
+VR+ NIRGTS +N +PC+ + + NIN Y G
Sbjct: 279 DVRYQNIRGTSTSVVGVNIKCSNTVPCERVSLSNINLNYVG 319
>gi|224092830|ref|XP_002309713.1| predicted protein [Populus trichocarpa]
gi|222852616|gb|EEE90163.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 130/268 (48%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS P G SI FN+ ND I+G+ S++S+ H+ I C + + +++ A
Sbjct: 131 WACRKSRQNCPVGA-ASITFNWANDILISGLTSINSQSTHLVINSCKKVVVRNVRTIAPD 189
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
SPNT+GIH+ +S G I+ S + TGDDC+S+ GHGIS+GSLGK
Sbjct: 190 QSPNTDGIHVQASTGVSITGSTLQTGDDCISIGPGTRNMLMSGIKCGPGHGISIGSLGKE 249
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
N++ V + V N F+G+ N++ NV+NPI+IDQ YC
Sbjct: 250 FNEDGVENIMVTNSVFSGSDNGVRIKSWARPSNGFVRKVVYKNLIMKNVQNPIIIDQNYC 309
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P NK + S VK S V + NI+GTSA PC+ I + +I Y
Sbjct: 310 PDNKGCPRQTSGVKISQVIYKNIQGTSATAEAVTFDCSPSNPCRGIRLQDIRLTY----- 364
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ TS C NV T G +P +CV
Sbjct: 365 --KNKAATSSCKNVGGTSAGVLMPESCV 390
>gi|24475519|dbj|BAC22689.1| polygalacturonase [Pyrus communis]
Length = 398
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 121/236 (51%), Gaps = 50/236 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WD S P G ++ F+ N+ ++G+ S++S+ FHI + GC N+K+ +K+ A
Sbjct: 139 WDCKSSGKSCPSGA-TTLSFSNSNNIVVSGLISLNSQMFHIVVNGCQNVKMQGVKVNAAG 197
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S+G I S I+TGDDCVS+ GHGIS+GSLGK
Sbjct: 198 NSPNTDGIHVQMSSGVTILDSKISTGDDCVSVGPGTTNLWIENVACGPGHGISIGSLGKD 257
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ V +TV+ TFTGT +IV NV+NPIVIDQ YC
Sbjct: 258 QQEAGVQNVTVKTVTFTGTENGVRIKSWGRPSTGFARSILFQHIVMTNVQNPIVIDQNYC 317
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYN 217
P +K S VK S+V + I GTSA ++ PC I + ++ YN
Sbjct: 318 PNDKGCPGQASGVKVSDVTYQGIHGTSATEVAVKFDCSSMYPCNGIRLQDVKLTYN 373
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYL 46
F+V GA ADG D +KAF +AW AC + AV+ VP G++L
Sbjct: 34 FSVSSLGAKADGSIDSTKAFLSAWSNAC--ASVNPAVIYVPAGRFL 77
>gi|426204265|gb|AFY12689.1| polygalacturonase 11c, partial [Medicago marina]
Length = 177
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 100/175 (57%), Gaps = 40/175 (22%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
++++ F F+N+S + G+ S DS+ FH+ +LGC N + +TA DSPNT+GIH+G S
Sbjct: 3 FMNLGFMFVNNSMVHGLTSKDSKNFHVMVLGCNNFTFDGFTVTAPGDSPNTDGIHMGRST 62
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
+I ++ IATGDDC+SL GHGISVGSLGK ++ V G+ V+NC
Sbjct: 63 DVKILNTNIATGDDCISLGDGSRKITVQNVKCGPGHGISVGSLGKYTTEDNVEGVIVKNC 122
Query: 149 TFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIK 179
T T T +I+ NNV NPI+IDQ YCP+N+C+ K
Sbjct: 123 TLTATQNGVRIKTWPDAPGTITVSDIHFEDIIMNNVMNPIIIDQEYCPWNQCSKK 177
>gi|297828105|ref|XP_002881935.1| hypothetical protein ARALYDRAFT_483504 [Arabidopsis lyrata subsp.
lyrata]
gi|297327774|gb|EFH58194.1| hypothetical protein ARALYDRAFT_483504 [Arabidopsis lyrata subsp.
lyrata]
Length = 384
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/241 (36%), Positives = 126/241 (52%), Gaps = 51/241 (21%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A WD KS P G +I F ++ ++G+ S++S+ FH+ I GC N+KL +K
Sbjct: 122 RGASLWDCKKSGKNCPSGA-TTIGFQSSSNVVVSGLTSLNSQMFHVVINGCNNVKLQGVK 180
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+ A +SPNT+GIH+ SS+ I ++ I+TGDDCVS+ GHGIS+G
Sbjct: 181 VLAAGNSPNTDGIHVQSSSTVSIFNTKISTGDDCVSIGPGTNGLWIENVACGPGHGISIG 240
Query: 130 SLGKGINDEEVVGLTVRNCTFTGTN-----------------------IVTNNVENPIVI 166
SLGK + V +TV+ TFTGT+ V NNVENPI+I
Sbjct: 241 SLGKDSVESGVQNVTVKTVTFTGTDNGVRIKSWARPSSGFAKNIRFQHCVMNNVENPIII 300
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YCP + C +V S +K S+V F +I GTSA ++ PC I + ++ Y
Sbjct: 301 DQNYCPDHDCPRQV-SGIKISDVLFVDIHGTSATEVGVKLDCSSKKPCTGIRLEDVKLTY 359
Query: 217 N 217
Sbjct: 360 R 360
>gi|413943668|gb|AFW76317.1| hypothetical protein ZEAMMB73_878249 [Zea mays]
Length = 328
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 124/240 (51%), Gaps = 55/240 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G ++G
Sbjct: 81 SLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKDMLIKDVTVTAPGDSPNTDGIHMGDTSGI 140
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 141 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 200
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T N+ + NPI ID +YCP C S+V
Sbjct: 201 KKTTFGVRIKAYEDAASELTVSKIHYENVKMEDSTNPIFIDMMYCPNKLCTANGASKVTV 260
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ KI C + + ++N Y+G N K T +C+N K
Sbjct: 261 KDVTFKNITGTSSTPEAISLLCTAKIQCTGVTMDDVNVEYSGTNNK-----TMDICTNTK 315
>gi|255551843|ref|XP_002516967.1| Exopolygalacturonase clone GBGE184 precursor, putative [Ricinus
communis]
gi|223544055|gb|EEF45581.1| Exopolygalacturonase clone GBGE184 precursor, putative [Ricinus
communis]
Length = 412
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 158/371 (42%), Gaps = 133/371 (35%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS------------- 47
VFNV FGA D KD++ AF AW+ CNW G + ++VP G++L+
Sbjct: 51 VFNVLQFGAKHDPRKDNALAFIQAWKATCNWAG-NARLVVPGGEFLASSMVFQGPCKNPA 109
Query: 48 -----------------------IRFNFLNDSTITGIKSVDS------------------ 66
I F +N +TG +VD
Sbjct: 110 PIVQIIGTIKAVSDLSNYAEDFWISFEKVNGLIVTGTGTVDGQGQNVWKYNDGGGSIFPA 169
Query: 67 --RYFH-----------INILGCY-------NLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+ H +N +G + N++ L + A SPNT+G HI SN
Sbjct: 170 NIKLLHVSNGIIRQINSVNPMGFHIGIVLSQNIRARRLHLNAPESSPNTDGFHISQSNQV 229
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+I+ SVIATGDDCV + GHGIS+GSLGK ++++V G+ V NCT
Sbjct: 230 KIAKSVIATGDDCVGMIHGSTDISIKKVTCGPGHGISIGSLGKYPDEKDVRGILVTNCTL 289
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +I+ +NV +PI+IDQ Y + PS+VK S
Sbjct: 290 KNTDNGIRIKTWGGSPPSVATSLTFQDIIMDNVRHPIIIDQSYGSKS-----APSRVKIS 344
Query: 188 NVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
NV++ NIRGT+ + ++PC+ + + NIN Y G + P ++S C N +
Sbjct: 345 NVKYMNIRGTTNSEVGVDIQCSKQVPCEGVRLSNINLKYIGGK---KLPFSSS-CLNARV 400
Query: 238 TLFGKQIPATC 248
+ G Q P C
Sbjct: 401 SYAGMQFPPPC 411
>gi|297824383|ref|XP_002880074.1| hypothetical protein ARALYDRAFT_903793 [Arabidopsis lyrata subsp.
lyrata]
gi|297325913|gb|EFH56333.1| hypothetical protein ARALYDRAFT_903793 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 131/273 (47%), Gaps = 57/273 (20%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A W KS P G S+ FN+ ND +TG+ S++S+ H+ I C N+ + +K
Sbjct: 123 RGASFWACRKSGKSCPVGAR-SMTFNWANDVVVTGLTSINSQATHLVINSCNNVIVRKVK 181
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+ A SPNT+G+H+ S G ++ S TGDDC+S+ GHGIS+G
Sbjct: 182 LVAPDQSPNTDGLHVQGSAGVTVTDSTFQTGDDCISIGPGTRNLYMSKLNCGPGHGISIG 241
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVI 166
SLG+ + V +T+ N F+G+ N++ NV+NPI++
Sbjct: 242 SLGRDSKEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIV 301
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YCP N+ K S VK S V + NI+GTS + PCQ I + +I ++
Sbjct: 302 DQNYCPANQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLMF 361
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
N G T+ C N+K G +P C+
Sbjct: 362 N-------GRSATATCKNIKGVKAGVVMPQGCL 387
>gi|426204250|gb|AFY12681.1| polygalacturonase 11c, partial [Medicago rigidula]
Length = 173
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 98/172 (56%), Gaps = 40/172 (23%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ F F+N+S + G+ S DS+ FH+ +LGC N + +TA DSPNT+GIH+G S +
Sbjct: 2 LGFMFVNNSMVNGLTSKDSKNFHVMVLGCNNFTFDGFTVTAPGDSPNTDGIHMGRSTDVK 61
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I ++ IATGDDC+SL GHGISVGSLGK ++ V G+TV+NCT T
Sbjct: 62 ILNTNIATGDDCISLGDGSRKITIQGVKCGPGHGISVGSLGKYTTEDNVEGVTVKNCTLT 121
Query: 152 GT------------------------NIVTNNVENPIVIDQLYCPYNKCNIK 179
T +I+ NNV NPI+IDQ YCP+N+C+ K
Sbjct: 122 STLNGVRLKTWPDAPGTITVSDIHFEDIIMNNVMNPIIIDQEYCPWNQCSKK 173
>gi|87242603|gb|ABD33834.1| polygalacturonase [Prunus domestica subsp. insititia]
Length = 393
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 132/257 (51%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ SV+S+ FHI I C N+++ +K++A +SPNT+GIH+
Sbjct: 144 PSGATTLSFSDSNNIVVSGLASVNSQMFHIVINDCQNVQMQGVKVSASGNSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 204 MSSGVTILNSKIATGDDCVSIGPGTSNLWIESVACGPGHGISIGSLGKEQEEAGVQNVTV 263
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNKCNIKVPS 182
+ TFTGT NI+ NVENPIVIDQ YCP NK S
Sbjct: 264 KTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVS 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V + +I GTSA ++ PC I + ++ Y K + E++ C
Sbjct: 324 GVQISDVTYEDIHGTSATEVAVKFDCSPKHPCSEIKLEDVKLTY-----KNQAAESS--C 376
Query: 233 SNVKPTLFGKQIPATCV 249
S+ T G P +C+
Sbjct: 377 SHADGTTEGVVQPTSCL 393
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+NV GA ADG D +KAF +AW +AC + VP G + FL D +G
Sbjct: 28 YNVASLGAKADGKTDSTKAFLSAWAKACA-SMNPGVIYVPAGTF------FLRDVVFSG 79
>gi|413943667|gb|AFW76316.1| hypothetical protein ZEAMMB73_878249 [Zea mays]
Length = 245
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 122/237 (51%), Gaps = 55/237 (23%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
+F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G ++G I+
Sbjct: 1 MDFVNNGEVSGVTLLNSKFFHMNMYQCKDMLIKDVTVTAPGDSPNTDGIHMGDTSGITIT 60
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT T
Sbjct: 61 NTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT 120
Query: 154 ------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
N+ + NPI ID +YCP C S+V +V
Sbjct: 121 TFGVRIKAYEDAASELTVSKIHYENVKMEDSTNPIFIDMMYCPNKLCTANGASKVTVKDV 180
Query: 190 RFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
F NI GTS+ KI C + + ++N Y+G N K T +C+N K
Sbjct: 181 TFKNITGTSSTPEAISLLCTAKIQCTGVTMDDVNVEYSGTNNK-----TMDICTNTK 232
>gi|15224383|ref|NP_181917.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
gi|3212847|gb|AAC23398.1| putative polygalacturonase [Arabidopsis thaliana]
gi|67633606|gb|AAY78727.1| putative polygalacturonase/pectinase [Arabidopsis thaliana]
gi|330255247|gb|AEC10341.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
Length = 392
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 130/273 (47%), Gaps = 57/273 (20%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A W KS P G S+ FN+ ND ++G+ S++S+ H+ I C N+ + +K
Sbjct: 128 RGASFWACRKSGKSCPVGAR-SMTFNWANDVVVSGLTSINSQTTHLVINSCNNVIVRKVK 186
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+ A SPNT+G+H+ S G ++ TGDDC+S+ GHGIS+G
Sbjct: 187 LVAPDQSPNTDGLHVQGSAGVTVTDGTFHTGDDCISIGPGTRNLYMSKLNCGPGHGISIG 246
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVI 166
SLG+ N+ V +T+ N F+G+ N++ NV+NPI++
Sbjct: 247 SLGRDANEAGVENITLINSVFSGSDNGVRIKTWARQSTGFVRNVLFQNLIMKNVQNPIIV 306
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YCP N+ K S VK S V + NI+GTS + PCQ I + +I +
Sbjct: 307 DQNYCPSNQGCPKQGSGVKISQVVYRNIQGTSRTQQALTFDCSRSNPCQAIRLHDIKLTF 366
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
N G TS C N+K G +P C+
Sbjct: 367 N-------GRSATSTCKNIKGVKAGVVMPQGCL 392
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV FGA DG D +KAF AW+ AC V VP G +L
Sbjct: 29 YNVVSFGAKPDGRTDSTKAFLGAWQAACR-SAAAVTVTVPRGSFL 72
>gi|297823959|ref|XP_002879862.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297325701|gb|EFH56121.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 366
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 153/347 (44%), Gaps = 109/347 (31%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS------------- 47
VFNV+ G+ DG D++ AF + W AC S + VP G +
Sbjct: 30 VFNVQRHGSKPDGKTDNANAFTSVWSRACRRKSGSSKIYVPKGTFYLGGVEFVGPCKNPI 89
Query: 48 ----------------------IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND-- 83
I F ++ND +I+G ++D + G + LND
Sbjct: 90 EFIIDGTLLAPANPSDIKQDTWINFRYINDLSISGSGTLDGQ-------GKQSWPLNDCH 142
Query: 84 ---------LKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------------ 122
+ DSPNT+GI +GS + IS++ I TGDDC+++
Sbjct: 143 KNPNCPKLAMVTFPPGDSPNTDGIKMGSCSNIHISNTNIGTGDDCIAILSGTTNLDISNV 202
Query: 123 ----GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------------------NIVTNN 159
GHGISVGSLGK ++++V LTVR+ F GT N V N
Sbjct: 203 KCGPGHGISVGSLGKNKDEKDVKDLTVRDVFFNGTSDGIRIKTWESSASKILVSNFVYEN 262
Query: 160 VE-----NPIVIDQLYCPYNKC--NIKVPSQVKTSNVRFNNIRGTSANKI---------- 202
++ PI IDQ YCP+ C K S V+ +++ NI GTS NK+
Sbjct: 263 IQMIDVGKPINIDQKYCPHPPCEHEQKGESHVQIQDLKLKNIYGTSKNKVAMNLQCSKSF 322
Query: 203 PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC+N+ + +IN +NG +EG +T++C NV ++ GK +P C+
Sbjct: 323 PCKNVELIDINIKHNG----LEGGSSTAVCENVDGSVRGKMVPQHCL 365
>gi|255576404|ref|XP_002529094.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531445|gb|EEF33278.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 390
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 128/267 (47%), Gaps = 56/267 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W K+ ++ PPG S+ F ND ++G+ S++S+ FHI++ +N+ L +L I A +
Sbjct: 130 WACRKAGMVCPPGAR-SMSFLGSNDIVVSGLTSINSQMFHISVDQSHNIILQNLNILAPS 188
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
SPNT+G+H+ SS G I +S I TGDDC+SL GHGIS+GSL +
Sbjct: 189 LSPNTDGVHVQSSTGITIRNSTIRTGDDCISLGPGSKNIWIQTIACGPGHGISIGSLAEH 248
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
N++ V +TV FT T NI+ N NPI+IDQ YC
Sbjct: 249 TNEDGVENVTVTGAIFTATQNGVRIKSWGRPTTGYAKNIVFQNIIMKNAYNPIIIDQKYC 308
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P S VK S V + NI GTSA+K+ PC+ + + NI Y
Sbjct: 309 PSGHGCPNQDSGVKISGVAYKNINGTSASKVAINFVCSSSTPCKGLKLQNIELTY----- 363
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATC 248
+ S C+N + G IP +C
Sbjct: 364 -LSKGAAMSSCNNANGSTSGLVIPRSC 389
Score = 38.1 bits (87), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV FGA DG D ++AF AW AC G + V VP G +L
Sbjct: 26 YNVIRFGAKPDGKTDSTEAFVRAWSSACRSTG-PATVSVPRGGFL 69
>gi|147783619|emb|CAN68140.1| hypothetical protein VITISV_035657 [Vitis vinifera]
gi|296084360|emb|CBI24748.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 130/273 (47%), Gaps = 57/273 (20%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
+ A W +S P G SI FN+ N+ ++G+ S++S+ H+ I C N+ + ++K
Sbjct: 125 KGAAYWACRRSGKSCPIGAR-SITFNWANNIVVSGLTSINSQLSHLVINSCKNVAVRNVK 183
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
I A SPNT+GIH+ S G I+ S I TGDDC+S+ GHGIS+G
Sbjct: 184 IIAPDQSPNTDGIHVQGSTGVTITGSTIGTGDDCISIGPGTRNLWMEHIKCGPGHGISIG 243
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVI 166
SLGK ++ V +T+ N F G+ NIV V+ PI++
Sbjct: 244 SLGKDKKEDGVQNVTLTNSVFIGSDNGVRIKSWARPSNSFVTNIVFRNIVMTRVQYPIIV 303
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YCP N+ S VK S V + NI+GTS ++ PC+ I + +IN Y
Sbjct: 304 DQNYCPNNQGCPNQSSGVKVSQVTYRNIKGTSRSQAAMIFNCSSSNPCRGIRLQDINLTY 363
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
TS C NV T G +P +CV
Sbjct: 364 -------MNKAATSTCRNVHGTRSGVVVPRSCV 389
>gi|224117794|ref|XP_002331633.1| predicted protein [Populus trichocarpa]
gi|222874029|gb|EEF11160.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 131/268 (48%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS P G SI FN+ ND I+G+ S++S+ HI I C N+ + ++++ A
Sbjct: 131 WACRKSGQNCPVGAR-SITFNWANDILISGLTSINSQSMHIVINSCNNVLVRNVRVIAPY 189
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S G I+ S + TGDDC+S+ GHGIS+GSLGK
Sbjct: 190 NSPNTDGIHVQISTGVTITGSTLQTGDDCISIGPSTRNLLMSSIKCGPGHGISIGSLGKD 249
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
N++ V +T+ N F+G+ N++ NV+NPI+IDQ YC
Sbjct: 250 FNEDGVENITLTNSIFSGSDNGVRIKSWARPSNGFVRNVVFQNLIMKNVKNPIIIDQNYC 309
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P N+ S V+ S V + NI+GTSA PC+ I + +I Y
Sbjct: 310 PNNQGCPHQSSGVQISQVTYRNIQGTSATPKAVTFDCSPSNPCRGIELQDIKLTY----- 364
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
TS C N+ T G +P +C+
Sbjct: 365 --LNTAATSSCKNIGGTSSGVLMPESCI 390
>gi|242060866|ref|XP_002451722.1| hypothetical protein SORBIDRAFT_04g006610 [Sorghum bicolor]
gi|241931553|gb|EES04698.1| hypothetical protein SORBIDRAFT_04g006610 [Sorghum bicolor]
Length = 462
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 124/253 (49%), Gaps = 55/253 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+ ++ I GI +S++FH+NI N+ ++ + + A +SPNT+GIH+G S
Sbjct: 215 SLVLDFVTNAQIRGITLANSKFFHLNIFASKNVLIDKVTVKAPGNSPNTDGIHMGDSENV 274
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS + I GDDC+S+ GHGISVGSLG+ ++++V + V+ CT
Sbjct: 275 TISGTTIGVGDDCISIGPGSKTIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVKVKGCTL 334
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
GT ++ +NV PI+IDQ YCP N C S+V
Sbjct: 335 VGTTNGLRIKSYEDSKSSPKVTKFVYEDVTMDNVSYPIIIDQKYCPNNICVRSGASKVAV 394
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++V F NI GTS A+ +PCQ + + N++ YN N K T ++C N
Sbjct: 395 TDVVFKNIHGTSNTPEAITLNCADNLPCQGVQLHNVDIKYNKSNNK-----TMAVCKNAV 449
Query: 237 PTLFGKQIPATCV 249
FG C+
Sbjct: 450 GKSFGLSKELACI 462
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
++ GA DG D + AW+ AC+ G++ +++PPG YL+
Sbjct: 95 LDIAQLGAKGDGKSDSTPMILKAWKNACDATGVQK-IVIPPGNYLT 139
>gi|198246564|gb|ACH82233.1| ripening-induced polygalacturonase [Carica papaya]
gi|198246566|gb|ACH82234.1| ripening-induced polygalacturonase [Carica papaya]
Length = 397
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/271 (36%), Positives = 135/271 (49%), Gaps = 63/271 (23%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTIT--GIKSVDSRYFHINILGCYNLKLNDLKITA 88
WD K+ P G + FLN I G+ S++S+ FHI I GC N+KL K++A
Sbjct: 138 WDCKKAGHSCPFG---ATSIGFLNSRNIVIDGLTSLNSQVFHIVIYGCNNVKLQGTKVSA 194
Query: 89 HADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLG 132
SPNT+GIH+ S+ I S IATGDDCVS+ GHGISVGSLG
Sbjct: 195 SGVSPNTDGIHVQMSSHVTILSSTIATGDDCVSIGPGTSTLWIENMACGPGHGISVGSLG 254
Query: 133 KGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQL 169
K N+ V +TV++ +FTGT ++ NNV+NPIVIDQ
Sbjct: 255 KYSNEPGVQNVTVKSVSFTGTQNGARIKSWGRPSNGFAKNIIFQHVTMNNVQNPIVIDQN 314
Query: 170 YCPYN-KCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNG 218
YCP N +C K+ S +K S+V + +I G+SA ++ PC I + N+ Y
Sbjct: 315 YCPGNVRCPGKI-SGIKVSDVTYEDIHGSSATEVAVNFDCSPERPCTGIKLRNVRLSYK- 372
Query: 219 VNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
N K E + C + T+ G P +C+
Sbjct: 373 -NQKAE-----ASCKHAGGTVSGTVQPNSCL 397
>gi|7019679|emb|CAB75804.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 383
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/241 (37%), Positives = 126/241 (52%), Gaps = 56/241 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I+G+ S++S+ FH+ I GC N+KL+ +K++A +SPNT+GIH+ SS+ I +S I+TGD
Sbjct: 150 ISGLTSLNSQMFHVAINGCSNVKLDGVKVSADGNSPNTDGIHVQSSSTVSILNSKISTGD 209
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DCVS+ GHGIS+GSLGK + V +TV+ TFTGT
Sbjct: 210 DCVSIGPGTNGLWIENVACGPGHGISIGSLGKESVEVGVQNITVKTATFTGTENGVRIKS 269
Query: 154 ---------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS 198
+ V NNV+NPIVIDQ YCP N+ S +K S+V F +I GTS
Sbjct: 270 WARPSNGFAKNIRFQHCVMNNVQNPIVIDQNYCPGNENCPNQVSGIKISDVMFFDIHGTS 329
Query: 199 ANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
A ++ PC I I ++ Y P TT CS+ + G Q P +C
Sbjct: 330 ATEVGVKLDCSSKKPCTGIRIQDVKLTYR------NKPATTD-CSHAGGSEAGFQRPNSC 382
Query: 249 V 249
+
Sbjct: 383 L 383
Score = 37.7 bits (86), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKS-AVLVPPGKYL 46
+N+ +GA DG D +KAF W +AC +K +LVP G++L
Sbjct: 23 YNILSYGAKPDGKTDSTKAFTVLWAKAC--ASVKPVTILVPKGRFL 66
>gi|15226527|ref|NP_179147.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|4544368|gb|AAD22279.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330251308|gb|AEC06402.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 404
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 129/260 (49%), Gaps = 56/260 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + +IS + I TGDDC+++ GHGISVGSLGK ++++V L V
Sbjct: 208 SCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDVKDLIV 267
Query: 146 RNCTFTGT-------------------NIVTNNVE-----NPIVIDQLYCPYNKC--NIK 179
R+ F GT N V N++ PI IDQ YCP+ C K
Sbjct: 268 RDVIFNGTSDGIRIKNWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERK 327
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ N++ NI GTS NK+ PC+N+ + +IN NG V+ +T
Sbjct: 328 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNG----VKDGSST 383
Query: 230 SLCSNVKPTLFGKQIPATCV 249
S+C NV GK P C+
Sbjct: 384 SVCENVDGFARGKMFPPHCL 403
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ GA DG D++ AF + W AC S + VP G +
Sbjct: 30 VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTF 74
>gi|242094704|ref|XP_002437842.1| hypothetical protein SORBIDRAFT_10g003580 [Sorghum bicolor]
gi|241916065|gb|EER89209.1| hypothetical protein SORBIDRAFT_10g003580 [Sorghum bicolor]
Length = 395
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 126/250 (50%), Gaps = 54/250 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+RF ++ + G+ SV+ ++FH+ +L ++++ L+I+A A SPNT+GIHI S G
Sbjct: 151 SVRFVNTRNTAVRGVTSVNPKFFHMALLQARGVRMSGLRISAPAGSPNTDGIHIERSAGV 210
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ + I TGDDC+S+ GHG+SVGSLG+ + +V + VR+ F
Sbjct: 211 SITDARIGTGDDCISIGQGNDGVDVARVRCGPGHGMSVGSLGRYAGEGDVTRVRVRDVVF 270
Query: 151 TGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
TGT+ ++ +V NPI+IDQ YCPY C K S V
Sbjct: 271 TGTDNGVRIKTWENSPTKSSAAHMLFESLLMVDVRNPIIIDQKYCPYYTCEHKYVSGVTL 330
Query: 187 SNVRFNNIRGTSANK--------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
+++F NI+GT+ +PCQ + + +++ Y G EG T++ C N
Sbjct: 331 QDIQFKNIKGTTTTPVAVTLRCGVPCQGLVLQDVDLKYKG-----EG-GTSAKCENATAK 384
Query: 239 LFGKQIPATC 248
G Q P C
Sbjct: 385 YVGYQFPKPC 394
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS-IRFNF-LNDSTIT 59
+VK +GA +G+ DD+K TAW+ AC G + +L P Y+ ++F+ N ST+T
Sbjct: 32 DVKHYGAKGNGVDDDTKPLMTAWKAACGSAGAVTMLLSPGTYYIGPVQFHGPCNASTLT 90
>gi|255576412|ref|XP_002529098.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531449|gb|EEF33282.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 387
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/255 (33%), Positives = 129/255 (50%), Gaps = 62/255 (24%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI FN+ N+ I+G+ S++S+ H+ I C N+++ ++K+ A SPNT+GIH+ +S G
Sbjct: 143 SITFNWANNVIISGLTSINSQTMHLVINSCNNVQVRNVKLIAPDQSPNTDGIHVQTSTGV 202
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ S + TGDDC+S+ GHGIS+GSLG+ N++ V +T+ + F
Sbjct: 203 TITGSTLQTGDDCISIGPGTRNLLMSHIKCGPGHGISIGSLGRQFNEDGVQNITLTDAVF 262
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ---V 184
TG+ N++ NV+NPI+IDQ YCP NI P+Q V
Sbjct: 263 TGSDNGVRIKTWARPSTSFVRNVLFQNLIMRNVKNPIIIDQDYCPD---NIGCPNQNSGV 319
Query: 185 KTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
K S V + NI+GTS + PC+ I + +I Y TS C N
Sbjct: 320 KISQVMYKNIQGTSRSPQAVTFECSPSNPCKEIRLHDIKLTY-------MNKAATSSCKN 372
Query: 235 VKPTLFGKQIPATCV 249
+ T G IP +C+
Sbjct: 373 IGGTSSGLAIPESCL 387
>gi|359478302|ref|XP_002275740.2| PREDICTED: polygalacturonase [Vitis vinifera]
Length = 469
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 130/273 (47%), Gaps = 57/273 (20%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
+ A W +S P G SI FN+ N+ ++G+ S++S+ H+ I C N+ + ++K
Sbjct: 205 KGAAYWACRRSGKSCPIGAR-SITFNWANNIVVSGLTSINSQLSHLVINSCKNVAVRNVK 263
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
I A SPNT+GIH+ S G I+ S I TGDDC+S+ GHGIS+G
Sbjct: 264 IIAPDQSPNTDGIHVQGSTGVTITGSTIGTGDDCISIGPGTRNLWMEHIKCGPGHGISIG 323
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVI 166
SLGK ++ V +T+ N F G+ NIV V+ PI++
Sbjct: 324 SLGKDKKEDGVQNVTLTNSVFIGSDNGVRIKSWARPSNSFVTNIVFRNIVMTRVQYPIIV 383
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YCP N+ S VK S V + NI+GTS ++ PC+ I + +IN Y
Sbjct: 384 DQNYCPNNQGCPNQSSGVKVSQVTYRNIKGTSRSQAAMIFNCSSSNPCRGIRLQDINLTY 443
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
TS C NV T G +P +CV
Sbjct: 444 -------MNKAATSTCRNVHGTRSGVVVPRSCV 469
>gi|449439073|ref|XP_004137312.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 276
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 120/229 (52%), Gaps = 54/229 (23%)
Query: 70 HINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------- 122
H + GC N+ + +++I+A DSPNT+GI IG+S+ +I +S+I TGDDC+S+
Sbjct: 53 HFMLFGCSNINITNIRISAPGDSPNTDGIKIGTSDHIDIRNSIIGTGDDCISMLSGSKNI 112
Query: 123 ---------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------------------- 153
GHGIS+GSLGK +E V+G+TV+NCTF T
Sbjct: 113 YISNVVCGPGHGISIGSLGKYKEEENVMGITVKNCTFKNTTDGVRIKTWATPLMGTAYNI 172
Query: 154 ---NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------AN 200
+I + V NPI+IDQ YCP + CN S+++ S V F NI G+S +
Sbjct: 173 YYEDIFMDGVANPIIIDQEYCPVSPCNHDESSRIQISYVTFKNIWGSSKSASAVTLRCSE 232
Query: 201 KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ PC+NI + NIN + + NV S C +V +G Q P +C+
Sbjct: 233 RKPCKNIVLDNINLI-SSPNVG----RLFSSCFHVHGFSYGNQSPYSCL 276
>gi|3834451|gb|AAC70951.1| polygalacturonase 7 [Solanum lycopersicum]
Length = 397
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 129/257 (50%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F ND TI+G+ S DS+ FHI + GC+N KL +KI+A +SPNT+GIH+
Sbjct: 146 PKGATTLAFYNSNDITISGLTSKDSQMFHILLDGCHNAKLQGVKISAPGNSPNTDGIHLQ 205
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+ I +S I TGDDC+S+ GHGIS+GSLG + + V +TV
Sbjct: 206 SSSDVTILNSQIGTGDDCISIGPGNSNLWFENIACGPGHGISIGSLGWEMQEAGVQNVTV 265
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ +FTGT ++V NNV+NPI+IDQ YCP + + S
Sbjct: 266 KTSSFTGTENGVRVKTWARPSNGFVRNVLFQHVVMNNVQNPIIIDQNYCPNSGNCPEQGS 325
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
+K S++ + ++ GTSA ++ PC I + ++ Y + P S C
Sbjct: 326 GIKVSDITYEDVHGTSATEVAVKFDCSKTNPCNGIKLLDVKLSYK------DHPSEAS-C 378
Query: 233 SNVKPTLFGKQIPATCV 249
N G Q P +C+
Sbjct: 379 VNAGGMASGLQQPTSCL 395
>gi|357450573|ref|XP_003595563.1| Polygalacturonase [Medicago truncatula]
gi|355484611|gb|AES65814.1| Polygalacturonase [Medicago truncatula]
Length = 391
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 129/260 (49%), Gaps = 62/260 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P SI F++ + ++G+ S++S+ HI + C N+ + D+KI A + SPNT+GI++
Sbjct: 142 PAAARSISFSWSKNVLVSGLTSLNSKAIHIAVDHCKNVVIKDVKIRAPSRSPNTDGINVQ 201
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S G ISHS I TGDDC+S+ GHGIS+GSLG N+ V +TV
Sbjct: 202 FSTGVTISHSTIMTGDDCISINQGTTHVWIDRIACGPGHGISIGSLGSDSNEAGVENVTV 261
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ FT T N++ NV PI+IDQ YC C P
Sbjct: 262 TDSVFTKTQNGVRIKSWAKPNNGYARDINFRNLIMQNVYYPIIIDQRYCTKTDC----PH 317
Query: 183 Q---VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
Q VK S+V + +I+GTSA+ + PC + + +IN +Y ++G +T+
Sbjct: 318 QNSGVKISSVSYQHIKGTSASPVAIKFDCSQSNPCLGLKLQDINLIY------LKGSKTS 371
Query: 230 SLCSNVKPTLFGKQIPATCV 249
S C N + G IP +C+
Sbjct: 372 SSCRNAGGSTLGLVIPKSCL 391
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
NV FGA +DG +D +K F +AW AC S + VP G +L + +F
Sbjct: 29 NVASFGAKSDGTQDSTKPFLSAWSLACK-SNEASTIYVPQGSFLLKQVSF 77
>gi|255576398|ref|XP_002529091.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531442|gb|EEF33275.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 392
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 93/258 (36%), Positives = 126/258 (48%), Gaps = 58/258 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F N+ I G+ S++S+ FHI I C N+K+ +KI+A SPNT+GIH+
Sbjct: 143 PYGATSLEFTNSNNIVIKGLASLNSQLFHIVINECQNVKVQGVKISASGSSPNTDGIHVE 202
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
+S G I S I TGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 203 ASTGVTILSSKIGTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDAQENGVQNVTV 262
Query: 146 RNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPYNK-CNIKVP 181
TFTGT+ +V NNV+NPIVIDQ YCP NK C +V
Sbjct: 263 TASTFTGTDNGVRIKTWGRPSSGFARSIRFQHVVMNNVQNPIVIDQNYCPDNKNCPGQV- 321
Query: 182 SQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSL 231
S VK S+V + +I G+SA K PC I + ++ Y + +
Sbjct: 322 SGVKISDVTYLDIHGSSATEVAVKFDCSKKYPCSGIKLQDVKLTY-------KNQPAEAA 374
Query: 232 CSNVKPTLFGKQIPATCV 249
C+N T G P +C+
Sbjct: 375 CANAGGTASGYVQPTSCL 392
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+NV +FGA DG D +KAF AW +AC S + VP G++ + F
Sbjct: 28 YNVLNFGAKPDGKTDSAKAFLAAWTQACA-STKSSTIYVPNGRFFLSKIAF 77
>gi|22325697|ref|NP_179149.2| polygalacturonase-like protein [Arabidopsis thaliana]
gi|330251310|gb|AEC06404.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 404
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 128/260 (49%), Gaps = 56/260 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + +IS + I TGDDC+++ GHGISVGSLGK ++++ L V
Sbjct: 208 SCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKNKDEKDAKDLIV 267
Query: 146 RNCTFTGT-------------------NIVTNNVE-----NPIVIDQLYCPYNKC--NIK 179
R+ F GT N V N++ PI IDQ YCP+ C K
Sbjct: 268 RDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERK 327
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ N++ NI GTS NK+ PC+N+ + +IN NG V+ +T
Sbjct: 328 GESHVQIQNLKLKNIYGTSKNKVAMNLQCSKIFPCKNVELIDINIKQNG----VKDGSST 383
Query: 230 SLCSNVKPTLFGKQIPATCV 249
S+C NV GK P C+
Sbjct: 384 SVCENVDGFARGKMFPQHCL 403
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ GA DG D++ AF + W AC S + VP G +
Sbjct: 30 VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTF 74
>gi|30349261|gb|AAP21998.1| endopolygalacturonase [Prunus persica]
Length = 351
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 117/224 (52%), Gaps = 49/224 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ ND ++G+ S++S+ FHI I GC+N+K+ +K++A SPNT+GIH+
Sbjct: 114 PSGATTLSFSNSNDIKVSGVISLNSQMFHIVINGCHNVKMQSVKVSASGQSPNTDGIHVQ 173
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+ I +S IATGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 174 MSSSVTILNSKIATGDDCVSIGPGTSDLWIENIKCGPGHGISIGSLGKDQEEAGVQNVTV 233
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
++ TF T + V NV+NPIVIDQ YCP NK S
Sbjct: 234 KSITFFNTQNGLRIKSWGRPSTGFAKDILFQHAVMLNVQNPIVIDQNYCPDNKGCPGQVS 293
Query: 183 QVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVY 216
VK S+V + +I GTSA +K PC NI + ++ Y
Sbjct: 294 GVKISDVTYQDIHGTSATEVAVKFDCSSKYPCSNIKMKDVKLTY 337
>gi|399764462|gb|AFP50431.1| polygalacturonase 3, partial [Medicago noeana]
Length = 236
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 106/195 (54%), Gaps = 45/195 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ETAWR+ D K++ + +++ FNFL S + I S DS+ FH+N+LGC N
Sbjct: 44 ETAWRQN---DCGKNSTC--KRRSMNLGFNFLKHSIVQDITSKDSKNFHVNVLGCTNFTF 98
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ ITA A S NT+GIHIG S ++ ++ IATGDDC+SL GHG
Sbjct: 99 DGFTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCISLGQGSRQITVQNVNCGPGHG 158
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVE 161
ISVGSLGK + +E V + V+NCTF+ T +I+ NV
Sbjct: 159 ISVGSLGKYLKEETVEHVLVKNCTFSNTDNGVRIKTWPTSPGTSPITDMHFEDIIMVNVR 218
Query: 162 NPIVIDQLYCPYNKC 176
NP++IDQ YCP+N+C
Sbjct: 219 NPVIIDQEYCPWNQC 233
>gi|224148194|ref|XP_002336609.1| predicted protein [Populus trichocarpa]
gi|222836310|gb|EEE74731.1| predicted protein [Populus trichocarpa]
Length = 318
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 119/216 (55%), Gaps = 53/216 (24%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+ + + ++ + I SVDS+YFH+++ C ++ ++++ +TA A+SPNT+GIHI S+G
Sbjct: 106 SIKLSKVKNAFVHEISSVDSKYFHMHVTSCNSISIHNINLTAPANSPNTDGIHISHSDGV 165
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ S I TGDDC+S+ GHG+SVGSLGK N+E+V G+ V NCT
Sbjct: 166 HVTSSKIGTGDDCISIGQGSTNILISQVFCGPGHGLSVGSLGKYKNEEDVRGIVVTNCTL 225
Query: 151 -----------------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +I ++V+NPI+IDQ Y N PS+VK S
Sbjct: 226 FYTTNGVRIKSYAASDPSQALNITFKDITMDSVKNPIIIDQKYGSRN----GAPSRVKIS 281
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNIN 213
NV + NI+GTS + +PCQ + + +I+
Sbjct: 282 NVHYQNIKGTSTSDVAVSFSCSSLVPCQGVELVDID 317
>gi|255566763|ref|XP_002524365.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223536326|gb|EEF37976.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 387
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 127/271 (46%), Gaps = 63/271 (23%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WD P G ++RF N+ I G+ S++S+ FHI I GC ++ + LK+ A
Sbjct: 128 WDCKAKGTDCPTGA-TTLRFTNSNNIRINGLLSLNSQMFHIAINGCQDVHVEGLKVIASR 186
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
DSPNT+G H+ SSN I +SVI TGDDC+S+ GHGIS+GSL K
Sbjct: 187 DSPNTDGFHVQSSNNVVIMNSVIKTGDDCISIGPGTKNLWIEGVKCGPGHGISIGSLAKD 246
Query: 135 INDEEVVGLTVRNCTFTGTN-----------------------IVTNNVENPIVIDQLYC 171
+E V +TV+ F T + +NV+NPI+IDQ YC
Sbjct: 247 TEEEGVQNVTVKRTIFADTQNGFRIKSWARHSNGFVKRIRFIGAIMSNVQNPIIIDQHYC 306
Query: 172 PYNKCNIKVPSQV---KTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNG 218
P+ NI P+QV K ++V + IRGTSA +K PC I + N+N Y+
Sbjct: 307 PH---NINCPNQVSGIKINDVIYQGIRGTSATPVAIKFDCSSKFPCGGIRLHNVNLTYS- 362
Query: 219 VNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ C NV G P C+
Sbjct: 363 ------NQAAQTFCVNVIGKRIGHVRPDGCL 387
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+NV +GA +GI D +KAF AW AC + + VP G+YL +F
Sbjct: 23 YNVLSYGAKPNGITDSTKAFLDAWAAACG-STDSTMIYVPKGRYLLGSMSF 72
>gi|157313320|gb|ABV32553.1| endopolygalacturonase [Prunus persica]
Length = 393
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ S++S+ FHI I C N+++ ++++A +SPNT+GIH+
Sbjct: 144 PSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 204 MSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTV 263
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNKCNIKVPS 182
+ TFTGT NI+ NVENPIVIDQ YCP NK S
Sbjct: 264 KTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVS 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V + +I GTSA ++ PC I + ++ Y K + E++ C
Sbjct: 324 GVQISDVTYEDIHGTSATEVAVKFDCSPKHPCSEIKLEDVKLTY-----KNQAAESS--C 376
Query: 233 SNVKPTLFGKQIPATCV 249
S+ T G P +C+
Sbjct: 377 SHADGTTEGVVQPTSCL 393
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+NV GA ADG D +KAF +AW +AC + VP G + FL D +G
Sbjct: 28 YNVASLGAKADGKTDSTKAFLSAWAKACA-SMNPGVIYVPAGTF------FLRDVVFSG 79
>gi|3747093|gb|AAC64184.1| endopolygalacturonase [Prunus persica]
gi|337730173|gb|AEI70577.1| endo-polygalacturonase [Prunus persica]
gi|337730175|gb|AEI70578.1| endo-polygalacturonase [Prunus persica]
gi|337730177|gb|AEI70579.1| endo-polygalacturonase [Prunus persica]
gi|337730179|gb|AEI70580.1| endo-polygalacturonase [Prunus persica]
Length = 393
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ S++S+ FHI I C N+++ ++++A +SPNT+GIH+
Sbjct: 144 PSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 204 MSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTV 263
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNKCNIKVPS 182
+ TFTGT NI+ NVENPIVIDQ YCP NK S
Sbjct: 264 KTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVS 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V + +I GTSA ++ PC I + ++ Y K + E++ C
Sbjct: 324 GVQISDVTYEDIHGTSATEVAVKFDCSPKHPCSEIKLEDVKLTY-----KNQAAESS--C 376
Query: 233 SNVKPTLFGKQIPATCV 249
S+ T G P +C+
Sbjct: 377 SHADGTTEGVVQPTSCL 393
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+NV GA ADG D +KAF +AW +AC + VP G + FL D +G
Sbjct: 28 YNVASLGAKADGKTDSTKAFLSAWAKACA-SMNPGVIYVPAGTF------FLRDVVFSG 79
>gi|85680278|gb|ABC72325.1| endo-polygalacturonase [Prunus persica]
gi|110293961|gb|ABG66442.1| endo-polygalactoronase [Prunus persica]
gi|337730171|gb|AEI70576.1| endo-polygalacturonase [Prunus persica]
Length = 393
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ S++S+ FHI I C N+++ ++++A +SPNT+GIH+
Sbjct: 144 PSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 204 MSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTV 263
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNKCNIKVPS 182
+ TFTGT NI+ NVENPIVIDQ YCP NK S
Sbjct: 264 KTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVS 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V + +I GTSA ++ PC I + ++ Y K + E++ C
Sbjct: 324 GVQISDVTYEDIHGTSATEVAVKFDCSPKHPCSEIKLEDVKLTY-----KNQAAESS--C 376
Query: 233 SNVKPTLFGKQIPATCV 249
S+ T G P +C+
Sbjct: 377 SHADGTTEGVVQPTSCL 393
>gi|224117790|ref|XP_002331632.1| predicted protein [Populus trichocarpa]
gi|222874028|gb|EEF11159.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 131/258 (50%), Gaps = 55/258 (21%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
PPG S+ F ++ ++ + S++S+ FHI+I C+N+ L ++KI+A + SPNT+GIH+
Sbjct: 140 PPGAR-SMSFVASSNIMVSRLTSINSQMFHISIDQCHNITLENMKISAPSWSPNTDGIHM 198
Query: 101 GSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT 144
SS G I++S+I TGDDC+S+ GHGIS+GSL N++ V +
Sbjct: 199 QSSTGISITNSMIKTGDDCISIGPGSKNLRIHRIVCGPGHGISIGSLALHQNEDGVENVK 258
Query: 145 VRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
V + F GT NI+ V NPI+IDQ YCP K K
Sbjct: 259 VTSVVFMGTQNGVRIKSWGRPSTGYARNIVFENIIMKYVYNPIIIDQNYCPSAKGCPKHS 318
Query: 182 SQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSL 231
S VK S V + NI+GTSA ++ PC+ + + +IN Y K G TS
Sbjct: 319 SGVKISGVTYKNIKGTSATQLAMNFVCSSSNPCKGLILEDINLTY----YKKSG-AATSF 373
Query: 232 CSNVKPTLFGKQIPATCV 249
C N + G IP +C+
Sbjct: 374 CKNANGSKKGVVIPPSCL 391
>gi|357138996|ref|XP_003571072.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 418
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 126/250 (50%), Gaps = 56/250 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +++ +++I G+ ++++FH+N+ C N+ ++ + ITA DSPNT+GIH+G S+
Sbjct: 170 SLVLDYVTNASIRGVTLKNAKFFHMNLFNCKNVVVDKVNITAPGDSPNTDGIHMGDSDNI 229
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++ I GDDC+S+ GHGISVGSLG+ +++ V + V NCT
Sbjct: 230 TITNTNIGVGDDCISIGPGTQRVRVHGSRCGPGHGISVGSLGRYKDEKNVEDIQVTNCTI 289
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
G IV +NV PIVIDQ YCP N CN S V
Sbjct: 290 KGATNGLRIKSYEDSKSVLKASRFVYDQIVMDNVSFPIVIDQKYCPNNICNKNGQSTVTI 349
Query: 187 SNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV- 235
++ F NI GTSA N +PCQ + + N+N Y V +T ++C N
Sbjct: 350 QDIVFKNIVGTSATPEAVTLNCPNNLPCQGVQLVNVNLKY----VGARNNKTMAVCHNAV 405
Query: 236 -KPTLFGKQI 244
K T K++
Sbjct: 406 GKSTNVAKEL 415
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
GA DG D ++A + AW+ AC G++ +++PPG +L
Sbjct: 55 LGAKGDGKTDATEAVQKAWKNACAATGVQK-IIIPPGNFL 93
>gi|115468924|ref|NP_001058061.1| Os06g0611500 [Oryza sativa Japonica Group]
gi|51090902|dbj|BAD35507.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51091974|dbj|BAD35503.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113596101|dbj|BAF19975.1| Os06g0611500 [Oryza sativa Japonica Group]
gi|215704268|dbj|BAG93108.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 124/239 (51%), Gaps = 55/239 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ N +ND ++GI +++++FH+NI C ++K++ + I A DSPNT+GIH+G S+
Sbjct: 178 TLVLNTVNDGVVSGITLLNAKFFHMNIYRCKDIKISGVTINAPGDSPNTDGIHMGDSSKI 237
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ + I TGDDC+S+ GHGIS+GSLG+ ++ +V ++V C
Sbjct: 238 TIAATTIGTGDDCISIGPGTDGVNITGVTCGPGHGISIGSLGRYKDERDVRDVSVTRCVL 297
Query: 151 TGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +V ++V+NPI+IDQ YCP + C K S+V
Sbjct: 298 RKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMDHVDNPIIIDQKYCPNSICTSKGDSKVSV 357
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+V F NI G+S + K+PC + + ++ +Y G + K TT++C +
Sbjct: 358 RDVTFRNITGSSNTPAVVQLLCSGKLPCSGVAMQDVRVLYGGSDKK-----TTAVCDHA 411
Score = 40.0 bits (92), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
F++ GAV +G D + A AWR AC G K +L+P G +++
Sbjct: 54 FDITKLGAVGNGRADSTGAVMAAWRSACAGAG-KQTILIPKGDFMT 98
>gi|125526181|gb|EAY74295.1| hypothetical protein OsI_02183 [Oryza sativa Indica Group]
Length = 407
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 58/271 (21%)
Query: 32 DGIKSAVLVPPGKYL--SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 89
DG +AV K L ++ +++ + T++G+K V++++FHIN+ + + ++ ITA
Sbjct: 142 DGQGAAVWKDECKILPNTLVLDYVKNGTVSGLKLVNAKFFHINVYMSKGVTIKNVTITAV 201
Query: 90 ADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGK 133
A+SPNT+G+HIG S+ +S S IATGDDC+S+ G GISVG LG+
Sbjct: 202 ANSPNTDGVHIGDSSEISVSDSTIATGDDCISVGPGSSRISIQGITCGPGQGISVGCLGR 261
Query: 134 GINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVIDQL 169
++++V +TVR+C T NI + V NP+++DQ
Sbjct: 262 FKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITVSRLTFENIRMDGVANPVIVDQK 321
Query: 170 YCPYNKCNIKVPSQ-VKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNG 218
YCP C K S+ V NV F NI GTS ++++PC + + ++N Y+G
Sbjct: 322 YCPEKDCPEKKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDG 381
Query: 219 VNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ K T ++C+N K G C+
Sbjct: 382 KDNK-----TMAVCTNAKGISKGSLQALACL 407
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
VF++ + GAVADG D +KA + AW AC G V++P G++++ NF
Sbjct: 44 VFDITELGAVADGKTDSTKAVQDAWDAACGLAG-SQKVVIPKGEFMTGPLNF 94
>gi|255576396|ref|XP_002529090.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531441|gb|EEF33274.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 393
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/257 (34%), Positives = 124/257 (48%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ + I G+ S +S+ FHI I GC N+K+ + ++A DSPNT+GIH+
Sbjct: 144 PSGATSLGFSNSKNIAINGLTSQNSQMFHIVINGCQNVKVQGVTVSASGDSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S G I +S I TGDDC+S+ GHGIS+GSLGK + + V +TV
Sbjct: 204 QSGGVTILNSKIRTGDDCISIGPGATNLWIENIACGPGHGISIGSLGKDLQEAGVQNVTV 263
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ TFTGT + + NV+NPIVIDQ YCP NK S
Sbjct: 264 KTVTFTGTQNGVRIKSWGRPSSGFARNILFQHAIMTNVQNPIVIDQNYCPDNKNCPGQES 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
VK S V + +I GTSA ++ PC I + ++ Y P S C
Sbjct: 324 GVKISGVTYQDIHGTSATEVAVKFDCSKKEPCTGIKLEDVKLTYK------NQPADAS-C 376
Query: 233 SNVKPTLFGKQIPATCV 249
+N T G P++C+
Sbjct: 377 NNADGTASGFVQPSSCL 393
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
+NV +GA DG D +KAF AW +AC + VP GK+ FL D + G
Sbjct: 29 YNVLSYGAKPDGRTDSTKAFLAAWTQACG-STKPPTIYVPSGKF------FLKDLSFGGP 81
Query: 62 KSVDSRYFHIN 72
++ F I+
Sbjct: 82 CKNNAILFRID 92
>gi|15218263|ref|NP_175003.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|12321534|gb|AAG50821.1|AC026757_2 polygalacturonase, putative [Arabidopsis thaliana]
gi|67633432|gb|AAY78640.1| glycoside hydrolase family 28 protein [Arabidopsis thaliana]
gi|332193823|gb|AEE31944.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 404
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 128/260 (49%), Gaps = 56/260 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N + + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNIKCGPGHGISVGSLGKNKDEKDVKHLTV 267
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKC--NIK 179
R+ F GT NI +V PI IDQ YCP+ C K
Sbjct: 268 RDTVFNGTSDGIRIKTWESSASKIVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKK 327
Query: 180 VPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ +++ NI GTS N PC+N+ + +IN + G +E +T
Sbjct: 328 GESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG----LEKGHST 383
Query: 230 SLCSNVKPTLFGKQIPATCV 249
++C NV ++ K +P C+
Sbjct: 384 AMCENVDGSVRSKMVPQHCL 403
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ +G+ DG D++ AF + W+ AC S + VP G +
Sbjct: 30 VFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGTF 74
>gi|222635874|gb|EEE66006.1| hypothetical protein OsJ_21955 [Oryza sativa Japonica Group]
Length = 416
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 124/238 (52%), Gaps = 55/238 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ N +ND ++GI +++++FH+NI C ++K++ + I A DSPNT+GIH+G S+
Sbjct: 169 TLVLNTVNDGVVSGITLLNAKFFHMNIYRCKDIKISGVTINAPGDSPNTDGIHMGDSSKI 228
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ + I TGDDC+S+ GHGIS+GSLG+ ++ +V ++V C
Sbjct: 229 TIAATTIGTGDDCISIGPGTDGVNITGVTCGPGHGISIGSLGRYKDERDVRDVSVTRCVL 288
Query: 151 TGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +V ++V+NPI+IDQ YCP + C K S+V
Sbjct: 289 RKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMDHVDNPIIIDQKYCPNSICTSKGDSKVSV 348
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+V F NI G+S + K+PC + + ++ +Y G + K TT++C +
Sbjct: 349 RDVTFRNITGSSNTPAVVQLLCSGKLPCSGVAMQDVRVLYGGSDKK-----TTAVCDH 401
Score = 40.0 bits (92), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
F++ GAV +G D + A AWR AC G K +L+P G +++
Sbjct: 45 FDITKLGAVGNGRADSTGAVMAAWRSACAGAG-KQTILIPKGDFMT 89
>gi|315143143|gb|ADT82706.1| endopolygalacturonase [Prunus armeniaca]
Length = 393
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 132/257 (51%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ S++S+ FHI I C N+++ ++++A +SPNT+GIH+
Sbjct: 144 PSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATGDDC+S+ GHGIS+GSLGK + V +TV
Sbjct: 204 MSSGVTILNSKIATGDDCISIGPGTSNLWIESVACGPGHGISIGSLGKEQEEAGVQNVTV 263
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNKCNIKVPS 182
+ TFTGT NI+ NVENPI+IDQ YCP NK S
Sbjct: 264 KTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIIIDQHYCPDNKGCPGQVS 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V + +I GTSA ++ PC I + ++ Y K + E++ C
Sbjct: 324 GVQISDVTYEDIHGTSATEVAVKFDCSPEHPCSEIKLEDVKLTY-----KNQAAESS--C 376
Query: 233 SNVKPTLFGKQIPATCV 249
S+ T G P +C+
Sbjct: 377 SHADGTTGGVVQPTSCL 393
Score = 38.5 bits (88), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+NV GA ADG D +KAF +AW +AC + VP G + FL D +G
Sbjct: 28 YNVASLGAKADGKTDSTKAFLSAWAKACA-SMNPGVIYVPAGTF------FLRDVVFSG 79
>gi|186511744|ref|NP_193112.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332657922|gb|AEE83322.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 404
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 130/260 (50%), Gaps = 56/260 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA +SPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LT+
Sbjct: 208 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNVNCGPGHGISVGSLGKNKDEKDVKDLTI 267
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKC--NIK 179
R+ F GT NI +V PI IDQ YCP+ C K
Sbjct: 268 RDVIFNGTSDGIRIKTWESSASKILVSNFLYENIQMIDVGKPINIDQKYCPHPPCEHEQK 327
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ N++ NI GTS NK+ PC+NI + +IN NG + +T
Sbjct: 328 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNG----LVDSFST 383
Query: 230 SLCSNVKPTLFGKQIPATCV 249
+C NV ++ GK +P C+
Sbjct: 384 LVCENVDGSVSGKMVPQHCI 403
>gi|449525182|ref|XP_004169597.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Cucumis
sativus]
Length = 399
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 57/260 (21%)
Query: 39 LVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGI 98
L P G ++ F+ + + +KS++S+ FH+ I GC N+ + L+++A ++SPNT+GI
Sbjct: 148 LCPTGA-TTLEFSNSKNVVVNNLKSLNSQMFHVAINGCENVMVKGLRVSASSNSPNTDGI 206
Query: 99 HIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVG 142
H+ SS+ I +S I TGDDC+S+ GHGIS+GSLGK + + V
Sbjct: 207 HVQSSSNVTIINSKIGTGDDCISVGPGVSNLQIQNISCGPGHGISIGSLGKDVKEIGVQN 266
Query: 143 LTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIK 179
+T++N F+ T +IV NNV NPIVIDQ YCP +K
Sbjct: 267 VTIKNVVFSRTENGVRIKTWGKPSNGFATDIVFQHIVMNNVHNPIVIDQNYCPTHKGCPG 326
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S +K SNV + +I+GTS K+ PC I + N++ Y +
Sbjct: 327 QASGIKISNVTYQDIQGTSTTKVAIMFDCSPTNPCIGIKLENVSLTYKNQTAEAR----- 381
Query: 230 SLCSNVKPTLFGKQIPATCV 249
C+N + + G+ P C+
Sbjct: 382 --CNNARGIVVGQVQPTACL 399
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+NV D G DG D ++AF+TAW AC K+ + VP G+Y
Sbjct: 33 YNVVDVGGKGDGTTDSTQAFQTAWTNACA-STKKATIYVPRGRY 75
>gi|4455305|emb|CAB36840.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7268080|emb|CAB78418.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 375
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/260 (33%), Positives = 130/260 (50%), Gaps = 56/260 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA +SPNT+GI +G
Sbjct: 119 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGNSPNTDGIKMG 178
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LT+
Sbjct: 179 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNVNCGPGHGISVGSLGKNKDEKDVKDLTI 238
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKC--NIK 179
R+ F GT NI +V PI IDQ YCP+ C K
Sbjct: 239 RDVIFNGTSDGIRIKTWESSASKILVSNFLYENIQMIDVGKPINIDQKYCPHPPCEHEQK 298
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ N++ NI GTS NK+ PC+NI + +IN NG+ +T
Sbjct: 299 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKRFPCKNIELIDINITNNGLVDSF----ST 354
Query: 230 SLCSNVKPTLFGKQIPATCV 249
+C NV ++ GK +P C+
Sbjct: 355 LVCENVDGSVSGKMVPQHCI 374
>gi|449449695|ref|XP_004142600.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 399
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 57/260 (21%)
Query: 39 LVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGI 98
L P G ++ F+ + + +KS++S+ FH+ I GC N+ + L+++A ++SPNT+GI
Sbjct: 148 LCPTGA-TTLEFSNSKNVVVNNLKSLNSQMFHVAINGCENVMVKGLRVSASSNSPNTDGI 206
Query: 99 HIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVG 142
H+ SS+ I +S I TGDDC+S+ GHGIS+GSLGK + + V
Sbjct: 207 HVQSSSNVTIINSKIGTGDDCISVGPGVSNLQIQNISCGPGHGISIGSLGKDVKEIGVQN 266
Query: 143 LTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIK 179
+T++N F+ T +IV NNV NPIVIDQ YCP +K
Sbjct: 267 VTIKNVVFSRTENGVRIKTWGKPSNGFATDIVFQHIVMNNVHNPIVIDQNYCPTHKGCPG 326
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S +K SNV + +I+GTS K+ PC I + N++ Y +
Sbjct: 327 QASGIKISNVTYQDIQGTSTTKVAIMFDCSPTNPCIGIKLENVSLTYKNQTAEAR----- 381
Query: 230 SLCSNVKPTLFGKQIPATCV 249
C+N + + G+ P C+
Sbjct: 382 --CNNARGIVVGQVQPTACL 399
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+NV DFG DG D ++AF+TAW AC K+ + VP G+Y
Sbjct: 33 YNVVDFGGKGDGTTDSTQAFQTAWTNACA-STKKATIYVPRGRY 75
>gi|15226529|ref|NP_179148.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|20197930|gb|AAM15318.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330251309|gb|AEC06403.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 402
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 127/256 (49%), Gaps = 56/256 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N ++ + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSNIKDITSLNSKMGHFNFFSVHHFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + +IS + I TGDDC+++ GHGISVGSLGK ++++V L V
Sbjct: 208 SCSNIQISDTNIGTGDDCIAILSGTTNLNISNVNCGPGHGISVGSLGKSKDEKDVKDLIV 267
Query: 146 RNCTFTGT-------------------NIVTNNVE-----NPIVIDQLYCPYNKC--NIK 179
R+ F GT N V N++ PI IDQ YCP+ C K
Sbjct: 268 RDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERK 327
Query: 180 VPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ N++ NI GTS NK+ PC+N+ + +IN NG V+ +T
Sbjct: 328 GESHVQIQNLKLKNIYGTSKNKVAVNLQCSKIFPCKNVELIDINIKQNG----VKDGSST 383
Query: 230 SLCSNVKPTLFGKQIP 245
S+C NV GK P
Sbjct: 384 SVCENVDGFARGKMFP 399
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ GA DG D++ AF + W AC S + VP G +
Sbjct: 30 VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTF 74
>gi|115437052|ref|NP_001043199.1| Os01g0517500 [Oryza sativa Japonica Group]
gi|56202049|dbj|BAD73578.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113532730|dbj|BAF05113.1| Os01g0517500 [Oryza sativa Japonica Group]
gi|125570605|gb|EAZ12120.1| hypothetical protein OsJ_02002 [Oryza sativa Japonica Group]
Length = 407
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 137/271 (50%), Gaps = 58/271 (21%)
Query: 32 DGIKSAVLVPPGKYL--SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 89
DG +AV K L ++ +++ + T++G+K V++++FHIN+ + + ++ ITA
Sbjct: 142 DGQGAAVWKDECKILPNTLVLDYVKNGTVSGLKLVNAKFFHINVYMSKGVTIKNVTITAV 201
Query: 90 ADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGK 133
A+SPNT+G+HIG S+ +S + IATGDDC+S+ G GISVG LG+
Sbjct: 202 ANSPNTDGVHIGDSSEISVSDATIATGDDCISVGPGSSRISIQGITCGPGQGISVGCLGR 261
Query: 134 GINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVIDQL 169
++++V +TVR+C T NI + V NP+++DQ
Sbjct: 262 FKDEKDVTDVTVRDCVLRNTSNGVRIKSYEDVLSPITASRLTFENIRMDGVANPVIVDQK 321
Query: 170 YCPYNKCNIKVPSQ-VKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNG 218
YCP C K S+ V NV F NI GTS ++++PC + + ++N Y+G
Sbjct: 322 YCPEKDCPEKKGSKTVTIKNVTFRNITGTSNTPEAVSLLCSDQLPCSGMELLDVNLKYDG 381
Query: 219 VNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ K T ++C+N K G C+
Sbjct: 382 KDNK-----TMAVCTNAKGISKGSLQALACL 407
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
VF++ + GAVADG D +KA + AW AC G V++P G++++ NF
Sbjct: 44 VFDITELGAVADGKTDSTKAVQDAWDAACGLAG-SQKVVIPKGEFMTGPLNF 94
>gi|15224381|ref|NP_181916.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
gi|3212875|gb|AAC23426.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330255246|gb|AEC10340.1| putative polygalacturonase /pectinase [Arabidopsis thaliana]
Length = 394
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 127/273 (46%), Gaps = 57/273 (20%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A W K P G SI F++ N+ ++G+ S +S+ H+ + N+++ +++
Sbjct: 130 RGAGYWSCRKKGSHCPQGA-RSISFSWCNNVLLSGLSSFNSQNMHVTVHHSSNVRIENVR 188
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
I A + SPNT+GIH+ SS+G IS IATGDDC++L GHGIS+G
Sbjct: 189 IRAPSGSPNTDGIHVQSSSGVTISGGTIATGDDCIALSQGSRNIWIERVNCGPGHGISIG 248
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVI 166
SLG N+E V +TV + FT T N++ NNVENP++I
Sbjct: 249 SLGDYANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVENPVII 308
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIP----------CQNIGIGNINWVY 216
DQ YCP K + S VK S V F NI+GTS I C + + +I Y
Sbjct: 309 DQNYCPNGKGCPRQSSGVKISGVTFANIKGTSTTPIAMKLDCSGSNHCTGLRLQDIKLTY 368
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ S C N G +P C+
Sbjct: 369 -------MRRSSASYCRNAHGRASGVMVPRNCM 394
>gi|350537727|ref|NP_001233795.1| polygalacturonase precursor [Solanum lycopersicum]
gi|924650|gb|AAA80489.1| polygalacturonase precursor [Solanum lycopersicum]
Length = 392
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 129/257 (50%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ ++G+K +S+ F I + GC+N+KL +K++A +SPNT+GIH+
Sbjct: 140 PDGTTALTFYNSNNIIMSGVKVQNSQKFQILVDGCHNVKLQGVKVSAPGNSPNTDGIHVK 199
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+G I S I TGDDC+S+ GHGIS+GSLG + V +TV
Sbjct: 200 SSSGVSIMKSQIGTGDDCISIGPGTSNLWIEGIACGPGHGISIGSLGWKQQELGVQNVTV 259
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ TF+GT +IV NV+NPI+IDQ YCP ++ S
Sbjct: 260 KTVTFSGTTNGVRVKTWARPSNGFVRNVLFQHIVMVNVKNPIIIDQNYCPNHQSCPHKGS 319
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
+K S+V + +I GTSA ++ PC I + ++N Y + +T + C
Sbjct: 320 GIKISDVTYQDIHGTSATEVAVKLDCSKSNPCSGITLEDVNLSY-------QNQQTEASC 372
Query: 233 SNVKPTLFGKQIPATCV 249
N + + G Q P C+
Sbjct: 373 VNARGRVSGLQKPTNCL 389
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
++NV+++GA +DG D SKAF AW AC S + VP GKYL NF
Sbjct: 22 IYNVQNYGAKSDGKTDSSKAFLNAWAAACA-SNKPSTINVPIGKYLIHNANF 72
>gi|85680276|gb|ABC72324.1| endo-polygalacturonase [Prunus persica]
gi|110293963|gb|ABG66443.1| endo-polygalacturonase [Prunus persica]
Length = 393
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 132/257 (51%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ S++S+ FHI I C N+++ ++++A +SPNT+GIH+
Sbjct: 144 PSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 204 MSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTV 263
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNKCNIKVPS 182
+ TF+GT NI+ NVENPIVIDQ YCP NK S
Sbjct: 264 KTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVS 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V + +I GTSA ++ PC I + ++ Y K + E++ C
Sbjct: 324 GVQISDVTYEDIHGTSATEVAVKFDCSPKHPCSEIKLEDVKLTY-----KNQAAESS--C 376
Query: 233 SNVKPTLFGKQIPATCV 249
S+ T G P +C+
Sbjct: 377 SHADGTTEGVVQPTSCL 393
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+NV GA ADG D +KAF +AW +AC + VP G + FL D +G
Sbjct: 28 YNVASLGAKADGKTDSTKAFLSAWAKACA-SMNPGVIYVPAGTF------FLRDVVFSG 79
>gi|147858963|emb|CAN78679.1| hypothetical protein VITISV_033513 [Vitis vinifera]
Length = 376
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 134/268 (50%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W +S P G ++ N+ I G+ S++S+ FHI I GC+ +KL ++++A
Sbjct: 117 WACKRSGKSCPSGA-TTLGLTKSNNILIRGLTSLNSQMFHIVINGCHVVKLQGVRVSASG 175
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
SPNT+GIH+ S+G I + I TGDDCVS+ GHGIS+GSLGK
Sbjct: 176 HSPNTDGIHVQLSSGVTILDTQIKTGDDCVSVGPGATNLWIENVACGPGHGISIGSLGKD 235
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ +E V +TV+ TFTG+ +I+ NV+NPIVIDQ YC
Sbjct: 236 LKEEGVQNVTVKTVTFTGSQNGVRIKSWARASNGFVKRVVFQHILMVNVQNPIVIDQNYC 295
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P +K S VK S+V + +I GTSA+++ PC I + ++ Y
Sbjct: 296 PGHKNCPGQVSGVKVSDVTYQDIHGTSASEVAMKFDCSSKNPCSGIKLQDVKLTY----- 350
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ + PE++ C N G PA+C+
Sbjct: 351 RNKAPESS--CVNAGGMASGFVEPASCL 376
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV + GA DG D +KAF AW AC + + VPPG+YL
Sbjct: 13 YNVVNLGAKGDGHTDSTKAFLNAWAAACG-SASPATIYVPPGRYL 56
>gi|2459811|gb|AAC28903.1| polygalacturonase 1 [Solanum lycopersicum]
Length = 392
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 129/257 (50%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ ++G+K +S+ F I + GC+N+KL +K++A +SPNT+GIH+
Sbjct: 140 PDGTTALTFYNSNNIIMSGVKVQNSQKFQILVDGCHNVKLQGVKVSAPGNSPNTDGIHVK 199
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+G I S I TGDDC+S+ GHGIS+GSLG + V +TV
Sbjct: 200 SSSGVSIMKSQIGTGDDCISIGPGTSNLWIEGIACGPGHGISIGSLGWKQQELGVQNVTV 259
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ TF+GT +IV NV+NPI+IDQ YCP ++ S
Sbjct: 260 KTVTFSGTTNGVRVKTWARPSNGFVRNVLFQHIVMVNVKNPIIIDQNYCPNHQSCPHKGS 319
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
+K S+V + +I GTSA ++ PC I + ++N Y + +T + C
Sbjct: 320 GIKISDVTYQDIHGTSATEVAVKLDCSKSNPCSGITLEDVNLSY-------QNQQTEASC 372
Query: 233 SNVKPTLFGKQIPATCV 249
N + + G Q P C+
Sbjct: 373 VNARGRVSGLQKPTNCL 389
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
++NV+++GA +DG D SKAF AW AC S + VP GKYL NF
Sbjct: 22 IYNVQNYGAKSDGKTDSSKAFLNAWAAACA-SNKPSTINVPIGKYLIHNANF 72
>gi|359478229|ref|XP_002279845.2| PREDICTED: polygalacturonase-like [Vitis vinifera]
gi|147783621|emb|CAN68142.1| hypothetical protein VITISV_035659 [Vitis vinifera]
gi|296084359|emb|CBI24747.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 129/257 (50%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ I+G+ S++S+ FHI I GC N+KL ++++A DSPNT+GIH+
Sbjct: 140 PSGATTLGFTNSNNILISGLTSLNSQKFHIVINGCQNVKLQGVRVSASGDSPNTDGIHVQ 199
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I + I TGDDCVS+ GHGISVGSLGK + + V +TV
Sbjct: 200 LSSGVTILDTKIKTGDDCVSIGPGASNLWIENVACGPGHGISVGSLGKELKEAGVQNVTV 259
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ TFTG+ +I+ +V+NPI+IDQ YCP NK S
Sbjct: 260 KTVTFTGSQNGVRIKSWARASSGFARGILFQHILMVDVQNPILIDQNYCPDNKNCPGQVS 319
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
VK S+V + +I GTSA ++ PC I + ++ Y K + E + C
Sbjct: 320 GVKVSDVTYQDIHGTSATEVAVKFDCSSKNPCSGINLKDVKLTY-----KNKAAEAS--C 372
Query: 233 SNVKPTLFGKQIPATCV 249
+N G P +C+
Sbjct: 373 ANADGKASGFIEPESCL 389
>gi|296083327|emb|CBI22963.3| unnamed protein product [Vitis vinifera]
Length = 405
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 109/208 (52%), Gaps = 49/208 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I+ I + + FH+ I+ N+ ++ + ITA +SPNT+G+HIG S I+ S I GD
Sbjct: 170 ISNITLKNGKGFHMGIINSDNVTVHGVNITAPWNSPNTDGVHIGYSTNIHITSSTIGVGD 229
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DCVS+ GHGISVGSLGK +++VVG+ V+NCT GT
Sbjct: 230 DCVSIGPGSINITVFNTKCGPGHGISVGSLGKYSAEKDVVGVRVKNCTINGTQNGVRIKT 289
Query: 154 ---------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS 198
+IV NV NPI+IDQ YCP++ C PS VK S++ F NIRGT
Sbjct: 290 WPGSPASKASSFWFEDIVMINVSNPIIIDQEYCPWSTCTSSKPSLVKLSDIHFTNIRGTF 349
Query: 199 ANK----------IPCQNIGIGNINWVY 216
K +PC++I + NIN +
Sbjct: 350 NTKSAVALMCSSSVPCEDIQLLNINLTH 377
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFL 53
+F+V +GAV DG ++ AF AW +ACN G KS +LVP G + +F+
Sbjct: 31 IFDVTMYGAVGDGKTENGMAFLAAWDDACNHPG-KSTLLVPNGTFFIGPISFI 82
>gi|258640142|gb|ACV85697.1| ripening-induced polygalacturonase 4 [Carica papaya]
Length = 389
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 125/262 (47%), Gaps = 64/262 (24%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKS 63
V FG + DG + A W KS P G ++RF ++ + G+ S
Sbjct: 127 VSIFGGILDG------------QGASLWACKKSHKGCPKGA-TTLRFKRSSNIELNGVTS 173
Query: 64 VDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL- 122
V+S+ +HI I YN+K+ K++A DSPNT+GIH+ S I S IATGDDC+S+
Sbjct: 174 VNSQLYHIVIEESYNVKVQGAKVSASGDSPNTDGIHVQLSKDITIFDSRIATGDDCISVG 233
Query: 123 ---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------------- 153
GHGIS+GSLGK + + V +TV++ +GT
Sbjct: 234 PGTTNLWIENIACGPGHGISIGSLGKELKEAGVEDVTVKSVRLSGTKNGLRIKTWGRPSS 293
Query: 154 ---------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI-- 202
N+V N V+NPI+IDQ YCP C K S +K S + + NI GTSA K+
Sbjct: 294 GYARNIHFQNVVMNKVKNPIIIDQQYCPDKHCPHK--SGIKISEITYENIHGTSATKVGI 351
Query: 203 --------PCQNIGIGNINWVY 216
PC I + ++N Y
Sbjct: 352 MLDCSSEQPCSGIRMEDVNLTY 373
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSA-VLVPPGKYL 46
FNV +GA DG+ D +KAF AW EAC+ I A + VP GK+L
Sbjct: 39 FNVVHYGAKPDGLTDSTKAFIAAWHEACS--SINPATIYVPVGKFL 82
>gi|54291430|dbj|BAD62225.1| putative Exopolygalacturonase precursor [Oryza sativa Japonica
Group]
Length = 425
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 40/199 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ + + ++T+ G++ ++SR FH+N+ ++ L+I A A S NT+GIH+G S+
Sbjct: 159 TLELDSVANATVRGLRFLNSRGFHLNLHRSSHVAAERLRIEAPAASRNTDGIHVGLSSHV 218
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ S++ TGDDCVS+ GHGISVGSLG+ + +V GL VRNCT
Sbjct: 219 TVADSLVGTGDDCVSIGPGSSGVVIAGVACGPGHGISVGSLGREEGEGDVRGLVVRNCTV 278
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKC-NIKVPSQVKT 186
GT +IV +NV NPI+IDQ YCP+ C +I PS V+
Sbjct: 279 VGTTNGLRIKTWPGSPPSRAFNITFRDIVMSNVSNPIIIDQHYCPHAHCSDIAKPSLVQI 338
Query: 187 SNVRFNNIRGTSANKIPCQ 205
S+V + I GTS++++ Q
Sbjct: 339 SDVTYERIEGTSSSRVAVQ 357
>gi|326531262|dbj|BAK04982.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 417
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 125/244 (51%), Gaps = 57/244 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+ + T++GI ++S++FHINI ++K+ +L ITA +SPNT+GIHIG S+
Sbjct: 167 SLVLDFVKNGTVSGITLLNSKFFHINIYKSEDVKVENLTITAPGNSPNTDGIHIGDSSNI 226
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
++ + I TGDDC+S+ G GISVG LG+ ++++V +TV++C
Sbjct: 227 NVTGATIGTGDDCISIGGGSSRIRVTRVTCGPGQGISVGCLGRYKDEKDVSDVTVKDCVL 286
Query: 150 -----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQ--V 184
T NI +V NPI+IDQ YCP C K S+ V
Sbjct: 287 RSSTNGVRIKTYEDAVKSITASNLTFENIKMEDVANPIIIDQNYCPEKVCTAKSKSKSAV 346
Query: 185 KTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+V F NI GTS ++K PC + + ++N Y+G N K T +CSN
Sbjct: 347 TVKDVIFRNITGTSSTPEAVSLLCSDKQPCSGVDLIDVNVEYSGKNNK-----TIGVCSN 401
Query: 235 VKPT 238
K T
Sbjct: 402 AKGT 405
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+F++ GA +DG D SK + AW+ AC ++ VLVP G++L NF
Sbjct: 50 IFDITKLGATSDGKTDCSKEIQEAWKSACGA-AEQATVLVPKGEFLVGPLNF 100
>gi|449524613|ref|XP_004169316.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 227
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 113/230 (49%), Gaps = 55/230 (23%)
Query: 69 FHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------ 122
FH ++ CYN ++KI A +SPNT+G+H+ +S I++SVI TGDDCVS+
Sbjct: 3 FHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
Query: 123 ----------GHGISVGSLGKGINDEEVVGLTVRNCT-FTGTN----------------- 154
GHG+SVGSLGK ++ V + V+NCT F TN
Sbjct: 63 ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASRISGLASR 122
Query: 155 -----IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI------- 202
IV NV+NPI+IDQ Y K S K SNV+F NIRGTS +
Sbjct: 123 IIFEDIVMYNVKNPIIIDQTYSTKK----KKESNWKVSNVQFKNIRGTSTTNVAVLLECS 178
Query: 203 ---PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC+ + + +IN Y G N++ S CSN K FG Q P CV
Sbjct: 179 KLFPCEGVELRDINLSYGGTNLR--NTTIVSSCSNAKIATFGVQKPPPCV 226
>gi|224092840|ref|XP_002309718.1| predicted protein [Populus trichocarpa]
gi|222852621|gb|EEE90168.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 132/268 (49%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WD +S P G ++ + + I+G+ S++S+ FHI + GC+N+++ +KITA
Sbjct: 133 WDCKQSGKNCPSGA-TTLGVSNSQNIVISGLHSLNSQMFHIVVNGCHNVRIQGVKITASG 191
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S+G I +S I TGDDCVS+ GHGIS+GSLGK
Sbjct: 192 NSPNTDGIHVQLSSGVTILNSKIGTGDDCVSVGAGTTNLWIENVVCGPGHGISIGSLGKD 251
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ + V +TV+ TF GT + V V+NPIVIDQ YC
Sbjct: 252 LVEPGVQNVTVKTVTFIGTQNGLRIKTWGRPSNGFVRNVLFQHAVMTKVQNPIVIDQNYC 311
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P NK S VK S V + +I GTSA ++ PC I + N+ Y
Sbjct: 312 PDNKNCPGQSSGVKISGVTYQDIHGTSATQVAVKFDCSKRSPCTGIKMENVRLTY----- 366
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ P S C+N T G P++C+
Sbjct: 367 -MNQPAGAS-CNNADGTASGFIQPSSCL 392
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+NV ++GA DG D +KAF AW +AC +S + VPPG+Y F
Sbjct: 28 YNVLNYGAKPDGRTDSTKAFLAAWTQACGSIS-RSTLYVPPGRYFLRNVQF 77
>gi|125555523|gb|EAZ01129.1| hypothetical protein OsI_23157 [Oryza sativa Indica Group]
Length = 413
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 111/199 (55%), Gaps = 40/199 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ + + ++T+ G++ ++SR FH+N+ ++ L+I A A S NT+GIH+G S+
Sbjct: 147 TLELDSVANATVRGLRFLNSRGFHLNLHRSSHVAAERLRIEAPAASRNTDGIHVGLSSHV 206
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ S++ TGDDCVS+ GHGISVGSLG+ + +V GL VRNCT
Sbjct: 207 TVADSLVGTGDDCVSIGPGSSGVVVAGVACGPGHGISVGSLGREEGEGDVRGLVVRNCTV 266
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKC-NIKVPSQVKT 186
GT +IV +NV NPI+IDQ YCP+ C +I PS V+
Sbjct: 267 VGTTNGLRIKTWPGSPPSRAFNITFRDIVMSNVSNPIIIDQHYCPHAHCSDIAKPSLVQI 326
Query: 187 SNVRFNNIRGTSANKIPCQ 205
S+V + I GTS++++ Q
Sbjct: 327 SDVTYERIEGTSSSRVAVQ 345
>gi|399764460|gb|AFP50430.1| polygalacturonase 3, partial [Medicago laciniata]
Length = 236
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 103/195 (52%), Gaps = 45/195 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ET+WR+ N G S + ++ FNFL S + I S DS+ FH+N+LGC N
Sbjct: 44 ETSWRQ--NDCGKNSKC---KRRSMNFGFNFLKHSIVRDITSKDSKNFHVNVLGCTNFTF 98
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ ITA A S NT+GIHIG S ++ ++ IATGDDCVSL GHG
Sbjct: 99 DGFTITAPAKSINTDGIHIGRSTDVKVLNTNIATGDDCVSLGQGSRQITVQNVNCGPGHG 158
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVE 161
ISVGSLGK +E V + V+NCTFT T +I+ NV
Sbjct: 159 ISVGSLGKYPKEEAVEHVLVKNCTFTNTDNGVRIKTWPSAPGTSPITDMHFEDIIMVNVR 218
Query: 162 NPIVIDQLYCPYNKC 176
NP++IDQ YCP+N+C
Sbjct: 219 NPVIIDQEYCPWNQC 233
>gi|357124301|ref|XP_003563839.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 427
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 124/245 (50%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+ + TI+GI +++++FH+N+ C + + D+ +TA DSPNT+GIHIG S+G
Sbjct: 180 SLVLDFITNGTISGITLLNAKFFHMNVFQCKGVTIEDVTVTAPGDSPNTDGIHIGDSSGI 239
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ + I GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 240 TITGTTIGVGDDCISIGPGSTKINITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 299
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
N+ +V NPI+ID YCP C K S V
Sbjct: 300 KKATNGLRIKSYQSAESSLTASEIHYENVNMEDVANPIIIDMNYCPNKICPAKGSSHVTI 359
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS ++K+PC + + ++ Y+G N K T ++C N K
Sbjct: 360 KDVTFKNITGTSSTPEAVSLLCSDKLPCSGVELNDVKVEYSGKNNK-----TMAVCKNAK 414
Query: 237 PTLFG 241
T G
Sbjct: 415 GTAKG 419
>gi|255576394|ref|XP_002529089.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531440|gb|EEF33273.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 393
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 128/257 (49%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ + I+G+ S++S++FH+ I GC N+K+ + ++A +SPNT+GIH+
Sbjct: 144 PTGAASLGFSNSENIVISGVTSLNSQFFHMVINGCQNVKIQGVTVSASGNSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S I TGDDC+S+ GHGIS+GSLG + + V +TV
Sbjct: 204 LSSGVTILNSRIRTGDDCISIGPGTINMWIEKIACGPGHGISIGSLGNDLKEPGVQNVTV 263
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ FTGT +++ NV+NPIVIDQ YCP N S
Sbjct: 264 KTVIFTGTTNGVRIKSWARPSSGFARNIIFQDVLMTNVQNPIVIDQNYCPDNNNCPGQQS 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
VK S++R+ +I GTSA K+ PC I + ++ Y P S C
Sbjct: 324 GVKVSDIRYQDIHGTSATKVAVKFDCSKKNPCTKIKLQDVKLTYK------NQPADAS-C 376
Query: 233 SNVKPTLFGKQIPATCV 249
+N T G P++C+
Sbjct: 377 NNADGTSSGFVQPSSCL 393
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSA-VLVPPGKYL 46
FNV ++GA DG D +KAF +W++AC IK A V VP G++
Sbjct: 29 FNVLNYGAKPDGRTDSTKAFLASWKQACG--SIKPATVYVPSGRFF 72
>gi|356498258|ref|XP_003517970.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 395
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 132/267 (49%), Gaps = 57/267 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W+ +S P G S+ FN++N+ ++GI S++S+ HI I C N+ + ++++ A
Sbjct: 136 WNCRRSGKSCPVGAR-SMTFNWVNNLVVSGITSINSQLSHIVINACNNVLVKNVRLIAPD 194
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
SPNT+GIH+ S G I+ + TGDDC+S+ GHG+S+GSLG+
Sbjct: 195 QSPNTDGIHVERSTGVTINGCTLQTGDDCISIGDATYNIFMSHIKCGPGHGVSIGSLGQK 254
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
++++ V +T+ N F+G+ NI+ +NVENPI+IDQ YC
Sbjct: 255 LDEKGVENVTLTNAIFSGSDNGVRIKTWARPSNGFVRNVLFQNIIMDNVENPIIIDQNYC 314
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P N+ S +K S + + NI G+SA PCQ I + ++N Y
Sbjct: 315 PNNQGCPGQTSGIKISQITYLNINGSSATPEAVTFDCSPSNPCQGIKLHDVNLTY----- 369
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATC 248
+ TS C N+ T G P +C
Sbjct: 370 --KNKAATSSCKNIDGTSTGTLAPESC 394
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+NV FGA DG D ++ F +W+ AC + + VP G+YL NF
Sbjct: 32 YNVVKFGAKPDGKTDSTEPFIKSWQSACTSLN-PATIFVPKGRYLLKNTNF 81
>gi|218198536|gb|EEC80963.1| hypothetical protein OsI_23684 [Oryza sativa Indica Group]
Length = 416
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 55/238 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ N +N+ ++GI +++++FH+NI C ++K++ + I A DSPNT+GIH+G S+
Sbjct: 169 TLVLNTVNNGVVSGITLLNAKFFHMNIYRCKDIKISGVTINAPGDSPNTDGIHMGDSSKI 228
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ + I TGDDC+S+ GHGIS+GSLG+ ++ +V ++V C
Sbjct: 229 TIAATTIGTGDDCISIGPGTDGVNITGVTCGPGHGISIGSLGRYKDERDVRDVSVTRCVL 288
Query: 151 TGTN------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +V ++V+NPI+IDQ YCP + C K S+V
Sbjct: 289 RKTTNGLRIKSYEDSVSPVTVSKVSYDGVVMDHVDNPIIIDQKYCPNSICTSKGDSKVSV 348
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+V F NI G+S + K+PC + + ++ +Y G + K TT++C +
Sbjct: 349 RDVTFRNITGSSNTPAVVQLLCSGKLPCSGVAMQDVRVLYGGSDKK-----TTAVCDH 401
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
F++ GAV +G D + A AWR AC G K +L+P G +++
Sbjct: 45 FDITKLGAVGNGRADSTGAVMAAWRSACAGAG-KQTILIPKGDFMT 89
>gi|224103843|ref|XP_002334010.1| predicted protein [Populus trichocarpa]
gi|222839530|gb|EEE77867.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 132/254 (51%), Gaps = 63/254 (24%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+FN + + I I SV+ FHI+I+ N++ L ITA A SPNT+GIHI S+
Sbjct: 165 SIKFNHVANGIIRQITSVNPMGFHISIVLSQNIRAKHLHITAPATSPNTDGIHISQSSVV 224
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++S SVI+TGDDCV++ GHG SVGSLGK ++++V G+ V NCT
Sbjct: 225 KVSRSVISTGDDCVAIIQGSTDVSVKKVTCGPGHGFSVGSLGKYPDEKDVRGVVVTNCTL 284
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
+I+ +NV+ PI+IDQ Y +K N PS+VK S
Sbjct: 285 RNADNGVRIKTWGGSPPSQASNILFQDIIMDNVKRPIIIDQTYG--SKSN--SPSRVKIS 340
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPET---TSLCSN 234
+VR+ NIRGTSA++ +PC+ + NI N+K GP+ TS C+N
Sbjct: 341 DVRYINIRGTSASEVGVDLKCSEAVPCEKLYFSNI-------NLKYYGPKKLPFTSTCTN 393
Query: 235 VKPTLFGKQIPATC 248
K G Q P C
Sbjct: 394 AKVNYVGNQFPPPC 407
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV +GA G +D + +F AWR ACN+ G + +L+P G +L
Sbjct: 46 VFNVLQYGAKPGGKQDSALSFIRAWRAACNYRGT-ARLLIPMGTFL 90
>gi|357123872|ref|XP_003563631.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
gi|357123874|ref|XP_003563632.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 412
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/246 (33%), Positives = 125/246 (50%), Gaps = 56/246 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ +F N++ I GI ++S++FH+NI C + + D+ IT+ DSPNT+GIH+G ++
Sbjct: 163 TLVLDFCNNTLIEGITLLNSKFFHLNIYECRGITVKDVTITSPGDSPNTDGIHMGDASNI 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I+ + I TGDDC+S+ GHGISVGSLG+ ++++V +TV+NC
Sbjct: 223 TITDTKIGTGDDCISIGPGTSGVNISGVNCGPGHGISVGSLGRYKDEKDVTDITVKNCVL 282
Query: 150 -----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPS-QVK 185
T NI +V PI+IDQ YCP C K S +V
Sbjct: 283 NKSTNGVRIKSYEDAKSPLVASKLTYENIKMMDVGYPIIIDQKYCPNKICPPKPNSAKVT 342
Query: 186 TSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+V F NI GTS ++K PC + + ++ Y+G N K T ++C+N
Sbjct: 343 VKDVTFRNITGTSSTPEAVSLLCSDKQPCSGVQMFDVKVEYSGTNNK-----TMAVCTNA 397
Query: 236 KPTLFG 241
K T G
Sbjct: 398 KVTAKG 403
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
++ GA DG D +KA E AW AC G K +L+P G +L+ NF T
Sbjct: 43 LDIVKLGATGDGKTDSTKAVEEAWASACGGTG-KQTILIPKGDFLTGPLNFTGPCTGDIT 101
Query: 62 KSVDSRYFHINILGCY 77
VD N L Y
Sbjct: 102 IQVDGNLLGSNDLAKY 117
>gi|224110354|ref|XP_002315493.1| predicted protein [Populus trichocarpa]
gi|222864533|gb|EEF01664.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 95/254 (37%), Positives = 132/254 (51%), Gaps = 63/254 (24%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+FN + + I I SV+ FHI+I+ N++ L ITA A SPNT+GIHI S+
Sbjct: 132 SIKFNHVANGIIRQITSVNPMGFHISIVLSQNIRAKHLHITAPATSPNTDGIHISQSSVV 191
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++S SVI+TGDDCV++ GHG SVGSLGK ++++V G+ V NCT
Sbjct: 192 KVSRSVISTGDDCVAIIQGSTDVSVKKVTCGPGHGFSVGSLGKYPDEKDVRGVVVTNCTL 251
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
+I+ +NV+ PI+IDQ Y +K N PS+VK S
Sbjct: 252 RNADNGVRIKTWGGSPPSQASNILFQDIIMDNVKRPIIIDQTYG--SKSN--SPSRVKIS 307
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPET---TSLCSN 234
+VR+ NIRGTSA++ +PC+ + NI N+K GP+ TS C+N
Sbjct: 308 DVRYINIRGTSASEVGVDLKCSEAVPCEKLYFSNI-------NLKYYGPKKLPFTSTCTN 360
Query: 235 VKPTLFGKQIPATC 248
K G Q P C
Sbjct: 361 AKVNYVGNQFPPPC 374
>gi|121488655|emb|CAI64503.1| endopolygalacturonase [Prunus domestica subsp. insititia]
Length = 382
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/258 (34%), Positives = 133/258 (51%), Gaps = 58/258 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ S++S+ FHI I C N+++ + ++A +SPNTEGIH+
Sbjct: 133 PSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVGVSASGNSPNTEGIHVQ 192
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATG DCVS+ GHGIS+GSLGK + V +TV
Sbjct: 193 MSSGVTILNSKIATGGDCVSIGPGTSNLWIESVACGPGHGISIGSLGKEQEEAGVQNVTV 252
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNK-CNIKVP 181
+ TFTGT NI+ NVENPI+IDQ YCP NK C +V
Sbjct: 253 KTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIIIDQHYCPDNKGCPGRV- 311
Query: 182 SQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSL 231
S V+ S+V + +I GTSA ++ PC I + ++ Y K + E++
Sbjct: 312 SGVQISDVTYEDIHGTSATEVAVKFDCSPEHPCSEIKLEDVKLTY-----KNQAAESS-- 364
Query: 232 CSNVKPTLFGKQIPATCV 249
CS+ T G P +C+
Sbjct: 365 CSHADGTTEGVVQPTSCL 382
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV GA ADG+ D +KAF +AW +AC + VP G +
Sbjct: 17 YNVASLGAKADGMTDSTKAFLSAWAKACA-SMNPGVIYVPAGTFF 60
>gi|297848848|ref|XP_002892305.1| hypothetical protein ARALYDRAFT_887756 [Arabidopsis lyrata subsp.
lyrata]
gi|297338147|gb|EFH68564.1| hypothetical protein ARALYDRAFT_887756 [Arabidopsis lyrata subsp.
lyrata]
Length = 394
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 129/268 (48%), Gaps = 56/268 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS PPG SI FN D I+G+KS++S+ H+ + GC N+ + ++++ A
Sbjct: 132 WSCRKSGQNCPPG-VRSISFNSAKDVIISGVKSMNSQVSHMTLNGCTNVVVRNVRLVAPG 190
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
DSPNT+G + S G + S + TGDDCV++ GHG+S+GSL K
Sbjct: 191 DSPNTDGFTVQFSTGVTFTGSTVQTGDDCVAIGQGTRNFLISKLACGPGHGVSIGSLAKQ 250
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+N++ V +TV + FTGT N++ NV+NPI+IDQ YC
Sbjct: 251 LNEDGVENVTVSSSVFTGTQNGVRIKSWARPSTGFVRNVFFQNLIMKNVQNPIIIDQNYC 310
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P + S VK S V + NI+GTSA + PC I + +I +YN
Sbjct: 311 PSKQGCPTEHSGVKISQVTYKNIQGTSATQQAMNLACSKSNPCTGITLQDIKLIYN---- 366
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
+G TS C N G P +C+
Sbjct: 367 --KGTPATSFCFNAVGKNLGVIQPTSCL 392
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSA-VLVPPGKYL 46
VFNV FGA DG+ D + AF AW+ AC + SA V+VP G +L
Sbjct: 27 VFNVVSFGAKPDGVTDSTAAFLKAWQGACG--SVSSATVVVPTGTFL 71
>gi|449466382|ref|XP_004150905.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449518881|ref|XP_004166464.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 400
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 127/267 (47%), Gaps = 57/267 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W SA P G S+ F + + G+ S++S+ FHI + C N+K+ LK+ A +
Sbjct: 141 WACKNSANTCPSGT-TSLEFTNSQNILVNGLTSLNSQIFHIVVNQCRNVKMQGLKVFAAS 199
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+G S+ I +S I TGDDC+S+ GHGIS+GSLGK
Sbjct: 200 NSPNTDGIHVGDSSHVTILNSNIRTGDDCISIGPGSSNLWIENVVCGPGHGISIGSLGKE 259
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ ++ V +TV++C F T ++ NV+NPI+IDQ YC
Sbjct: 260 LKEKGVQNVTVKSCKFMDTQNGVRIKSWGRQSSGFAKDIRFQHLTMTNVQNPIIIDQNYC 319
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNV 221
P+N+ S V S+V++ NI GTSA K PC+ I + ++ Y
Sbjct: 320 PHNQGCPGQSSGVTVSDVKYKNIHGTSATPVAIKFDCSPKFPCKGIKLEDVKLSYKNQVA 379
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATC 248
K CSN + G P C
Sbjct: 380 KAS-------CSNAQGFDVGLVQPMGC 399
>gi|15218607|ref|NP_171778.1| polygalacturonase 4 [Arabidopsis thaliana]
gi|1346701|sp|P49062.1|PGLR1_ARATH RecName: Full=Exopolygalacturonase clone GBGE184; Short=ExoPG;
AltName: Full=Galacturan 1,4-alpha-galacturonidase;
AltName: Full=Pectinase; Flags: Precursor
gi|6056424|gb|AAF02888.1|AC009525_22 exopolygalacturonase [Arabidopsis thaliana]
gi|16226535|gb|AAL16194.1|AF428425_1 At1g02790/T14P4_2 [Arabidopsis thaliana]
gi|313682|emb|CAA51032.1| exopolygalacturonase [Arabidopsis thaliana]
gi|3004440|emb|CAA76127.1| polygalacturonase [Arabidopsis thaliana]
gi|17528952|gb|AAL38686.1| putative polygalacturonase [Arabidopsis thaliana]
gi|22136804|gb|AAM91746.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332189349|gb|AEE27470.1| polygalacturonase 4 [Arabidopsis thaliana]
Length = 422
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 136/278 (48%), Gaps = 71/278 (25%)
Query: 22 ETAWR-EACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 80
E W+ + C G K +PP S++F + + I GI SV+++ FH+ ++ N+
Sbjct: 151 EAVWKADGC---GKKVQCNLPP---TSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVN 204
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
+ ++K+TA A+SPNT+GIH+ +++ I S IATGDDCVS+ GH
Sbjct: 205 IQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGH 264
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVE 161
G+SVGSLGK N+E+V G+ V NCT T NI+ +V+
Sbjct: 265 GLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVK 324
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
NPI+IDQ Y SQV S++ F NIRGT+ K +PCQ + + +
Sbjct: 325 NPIIIDQNYGSRGG-----DSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVD 379
Query: 212 INWVYNGVNVKVEGPETTS-------LCSNVKPTLFGK 242
+N Y G K G + +S LC N GK
Sbjct: 380 VNLDYVG---KTGGEKKSSSGGLVGALCDNANVIFGGK 414
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
V+++ FGAV DG + KAF W + C+ + + +LVP G +L+
Sbjct: 51 VYDITKFGAVGDGSTNTFKAFLNTWIQVCD-SPVPATLLVPKGTFLA 96
>gi|399764466|gb|AFP50433.1| polygalacturonase 3, partial [Medicago sauvagei]
Length = 236
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 103/195 (52%), Gaps = 45/195 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ET+WR+ N G S + ++ FNFL S + I S DS+ FH+N+LGC N
Sbjct: 44 ETSWRQ--NDCGKNSKC---KRRSMNFGFNFLKHSIVRDITSKDSKNFHVNVLGCTNFTF 98
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ ITA + S NT+GIHIG S ++ ++ IATGDDCVSL GHG
Sbjct: 99 DGFTITAPSTSINTDGIHIGRSTDVKVLNTNIATGDDCVSLGQGSRQITVQNVNCGPGHG 158
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVE 161
ISVGSLGK +E V + V+NCTFT T +I+ NV
Sbjct: 159 ISVGSLGKYPKEEAVEHVLVKNCTFTNTDNGARIKTWPSAPGTSPITDMHFEDIIMVNVR 218
Query: 162 NPIVIDQLYCPYNKC 176
NP++IDQ YCP+N+C
Sbjct: 219 NPVIIDQEYCPWNQC 233
>gi|30349275|gb|AAP21999.1| endopolygalacturonase [Prunus persica]
Length = 352
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 118/224 (52%), Gaps = 49/224 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ S++S+ FHI I C N+++ ++++A +SPNT+GIH+
Sbjct: 115 PSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSASGNSPNTDGIHVQ 174
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 175 MSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTV 234
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNKCNIKVPS 182
+ TFTGT NI+ NVENPIVIDQ YCP NK S
Sbjct: 235 KTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVS 294
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
V+ S+V + +I GTSA ++ PC I + ++ Y
Sbjct: 295 GVQISDVTYEDIHGTSATEVAVKFDCSPKHPCSEIKLEDVKLTY 338
>gi|356577135|ref|XP_003556683.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 399
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 116/235 (49%), Gaps = 49/235 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WD S P ++ F N+ I G+ S++S+ FHI GC N+KL +K+ A
Sbjct: 139 WDCKNSGRGNCPSGATTLAFTNSNNIAIGGLTSMNSQMFHIVFNGCQNVKLQGVKVLADG 198
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S+ I +S I TGDDC+S+ GHGIS+GSLGK
Sbjct: 199 NSPNTDGIHVQMSSHITILNSKIRTGDDCISVGPGTTNLWIENIACGPGHGISIGSLGKD 258
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ + V +TV+ TFTGT + + NVENP++IDQ YC
Sbjct: 259 LKEAGVQNVTVKTVTFTGTQNGVRIKTWGRPSNGFVRNVLFQDAIMVNVENPVIIDQNYC 318
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVY 216
P NK S VK S+V + +I GTSA +K PC I + ++ Y
Sbjct: 319 PNNKGCPDQASGVKVSDVTYQDIHGTSATHVAVKFDCSSKYPCNGIKLEDVKLTY 373
>gi|255576408|ref|XP_002529096.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531447|gb|EEF33280.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 388
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/273 (31%), Positives = 132/273 (48%), Gaps = 57/273 (20%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
+ A W S P G S+ FN+ N+ I+G+ S++S+ H+ I C N+++ ++K
Sbjct: 124 KGAAFWACRASGKSCPVGAR-SVTFNWANNVLISGLTSINSQLTHLVINSCNNVEVRNVK 182
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+ A SPNT+GIH+ +S G I+ S + TGDDC+S+ GHG+S+G
Sbjct: 183 LVAPDQSPNTDGIHVQTSTGVTITGSTLQTGDDCISIGPGTRNLHMSRIKCGPGHGVSIG 242
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVI 166
SLG+ +++ V +T+ + FTG+ NI+ NV+NPI+I
Sbjct: 243 SLGRQFSEDGVQNITLTDALFTGSDNGVRIKTWARPSTSFVRNILFQNIIMRNVKNPIII 302
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVY 216
DQ YCP N S VK S V + NI+GTS ++ PC+ I + +I Y
Sbjct: 303 DQDYCPDNIGCPNKSSGVKISQVTYKNIQGTSGTPQAVTFECSSSNPCKGIRLHDIKLTY 362
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
TS C N+ G IP +C+
Sbjct: 363 -------MNKAATSSCKNIAGASSGLAIPESCL 388
>gi|356558585|ref|XP_003547585.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 412
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/267 (34%), Positives = 128/267 (47%), Gaps = 57/267 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS P G SI F+ ND ++G+ S++S+ HI + C N+ ++KI A +
Sbjct: 134 WRCRKSGSSCPAGAR-SITFSSCNDVKVSGLTSLNSQAMHIAVDHCKNILFKNVKIDAPS 192
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
SPNT+G ++ S G +S ++I+TGDDC++L GHGIS+GSLG
Sbjct: 193 TSPNTDGFNVILSTGVTVSQAIISTGDDCIALSQGNTNVWIEHITCGPGHGISIGSLGAY 252
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
N+ V +TV + F GT N+ N NPI+IDQ YC
Sbjct: 253 KNEAGVHNVTVTDSIFEGTQNGVRIKSWAQPSNGYASNIVFRNLTMKNANNPIIIDQNYC 312
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNV 221
P +K S VK S V + +IRGTSA PC+ I + +I+ VY
Sbjct: 313 PGDKSCPHQSSGVKISKVSYEHIRGTSACPQAINLDCSKSNPCEGIKLQDIDLVYG---- 368
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATC 248
EG TTS C+NV G IP +C
Sbjct: 369 --EG-STTSTCNNVGGINSGVVIPKSC 392
>gi|380469906|gb|AFD62267.1| endopolygalacturonase [Prunus armeniaca]
Length = 393
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 130/257 (50%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ S++S+ FHI I C N+++ ++++ +SPNT+GIH+
Sbjct: 144 PSGATTLSFSDSNNIVVSGLASLNSQMFHIVINDCQNVQMQGVRVSRSGNSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATGDDC+S+ GHGIS+GSLGK + V +TV
Sbjct: 204 MSSGVTILNSKIATGDDCISIGPGTSNLWIESVACGPGHGISIGSLGKEQEEAGVQNVTV 263
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNKCNIKVPS 182
+ TFTGT NI+ NVENPI+IDQ YCP NK S
Sbjct: 264 KTVTFTGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIIIDQHYCPDNKGCPGQVS 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V + +I GTSA ++ PC I + ++ Y K + E + C
Sbjct: 324 GVQISDVTYEDIHGTSATEVAVKFDCSPEHPCSEIKLEDVKLTY-----KNQAAECS--C 376
Query: 233 SNVKPTLFGKQIPATCV 249
S+ T G P +C+
Sbjct: 377 SHADGTTGGVVQPTSCL 393
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
+NV GA ADG D +KAF +AW +AC S + VP G + FL D +G
Sbjct: 28 YNVASLGAKADGKTDSTKAFLSAWAKACA-SMNPSVIYVPAGTF------FLRDVVFSGP 80
Query: 62 KSVDSRYFHI 71
++ F I
Sbjct: 81 CKSNAITFRI 90
>gi|357128256|ref|XP_003565790.1| PREDICTED: exopolygalacturonase-like [Brachypodium distachyon]
Length = 417
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 55/240 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ +++ + +++GI ++S++FH+NI ++K++++ ITA DSPNT+GIHIG S+
Sbjct: 167 TLVLDYVKNGSVSGITLLNSKFFHMNIYMSSDVKIDNVTITAPGDSPNTDGIHIGDSSNI 226
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
++ + I TGDDC+S+ G GISVG LG+ ++++V +TV++C
Sbjct: 227 HVTGATIGTGDDCISIGGGSASITVTGVTCGPGQGISVGCLGRYKDEKDVSDVTVKDCVL 286
Query: 150 -----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI +V NPI+IDQ YCP C K S V
Sbjct: 287 RSSTNGVRIKTYVDAVKSITASNLTFENIKMEDVANPIIIDQNYCPEKICTAKSKSAVTV 346
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
++ F NI GTS + K PC + + ++N Y+G N K G +C+N K
Sbjct: 347 KDIIFRNITGTSSTPEAVSLLCSEKQPCSGVELIDVNVEYSGKNNKTMG-----VCTNAK 401
>gi|222632421|gb|EEE64553.1| hypothetical protein OsJ_19405 [Oryza sativa Japonica Group]
Length = 385
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 136/341 (39%), Gaps = 100/341 (29%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSI----------- 48
+ + DFGAV DGI +D++AF AW AC AVL VP GK I
Sbjct: 34 LLTLDDFGAVGDGITNDTQAFLDAWNAACA--STDPAVLAVPAGKTYQIWPVRLAGPCKK 91
Query: 49 --------------------------------RFNFLNDSTITGIKSVDSRYFHINILGC 76
+F ++ GI + FH+ C
Sbjct: 92 KLKLMISGTIAAPASPDEWREPCSTVSAPKALQFEECRRVSVQGITMQNGPQFHLMFTRC 151
Query: 77 YNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL-------------- 122
++K + L++ A SPNT+GIH+ + ++I ++I+TGDDCVS+
Sbjct: 152 TDVKASFLRVVAPESSPNTDGIHLNDTTHAQIMDNLISTGDDCVSMVGNCSDVRVKDISC 211
Query: 123 --GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN----------------------IVTN 158
GHGIS+GSLGK + + + V C T T IV
Sbjct: 212 GPGHGISIGSLGKNRTTDRIENVRVDTCLLTNTTNGVRIKSWQGGMGYAHNLRFEGIVMK 271
Query: 159 NVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIG 208
NV NPI+IDQ YC V+ + F IRGTSA + +PC+++
Sbjct: 272 NVSNPIIIDQYYCDQPTPCANQTQAVEVRKIEFAGIRGTSATEQAIKLACSDAVPCRDLE 331
Query: 209 IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ N+N G G ++ C G +PA+C+
Sbjct: 332 LRNVNLTMVG------GGAASAFCHRASGKAAGAVVPASCL 366
>gi|224107090|ref|XP_002314372.1| predicted protein [Populus trichocarpa]
gi|222863412|gb|EEF00543.1| predicted protein [Populus trichocarpa]
Length = 410
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 130/251 (51%), Gaps = 57/251 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI+FN + + I I SV+ FHI+I+ N++ +L ITA A SPNT+GIHI S+
Sbjct: 167 SIKFNHVVNGIIRQITSVNPMGFHISIVLSQNIRAKNLHITAPATSPNTDGIHISQSSVV 226
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++S SVI+TGDDCV++ GHG SVGSLGK ++++V G+ V NCT
Sbjct: 227 KVSRSVISTGDDCVAIIQGSTDVSIKKVTCGPGHGFSVGSLGKYPDEKDVRGVVVTNCTL 286
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
+I+ +NV+ PI+IDQ Y +K N PS+VK S
Sbjct: 287 RNADNGVRIKTWGGSPPSQASNILFQDIIMDNVKRPIIIDQTYG--SKSN--SPSRVKIS 342
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
+VR+ NIRGTSA+ +PC+ + NIN Y G + TS C+N K
Sbjct: 343 DVRYINIRGTSASAVAVDLMCSKTVPCEKLYFSNINLKYYG----QKKLPFTSTCTNAKV 398
Query: 238 TLFGKQIPATC 248
G Q P C
Sbjct: 399 NYAGYQFPPPC 409
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV +GA G +D + +F AWR ACN+ G + +L+P G +L
Sbjct: 48 VFNVLQYGAKPGGKQDSALSFIRAWRAACNYRGT-ARLLIPMGTFL 92
>gi|238014862|gb|ACR38466.1| unknown [Zea mays]
Length = 360
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 105/207 (50%), Gaps = 41/207 (19%)
Query: 15 KDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINIL 74
K D + T C + S ++V ++ SI+ + ++TITG+ S+DS++FH+ ++
Sbjct: 143 KRDCRLLPTVSSATCATILLHSDIIVVQRRHQSIKLGLVRNATITGVTSLDSKFFHVAVV 202
Query: 75 GCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------------ 122
G +++++ + I A SPNT+G+HI S+ ++ S +ATGDDCVS+
Sbjct: 203 GSQDVRIHGVSIRAPRSSPNTDGVHIQGSSNVRVTDSAVATGDDCVSVGPGSSDVLVSGV 262
Query: 123 ----GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------- 153
GHGISVGSLG+ + +V L V NCT GT
Sbjct: 263 ACGPGHGISVGSLGRYPGEGDVRRLRVANCTVAGTSNGVRIKTWRGGSWPPTAVAGLVFE 322
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKV 180
+IV V NPI+IDQ YCPY C V
Sbjct: 323 DIVMRKVRNPIIIDQEYCPYPSCRESV 349
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VFNV DFGAVADG DDS+AF AW EAC G + AV+VP G YL
Sbjct: 29 VFNVSDFGAVADGRTDDSEAFLRAWTEACATPG-RPAVVVPRGDYL 73
>gi|449457983|ref|XP_004146727.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 325
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 86/157 (54%), Gaps = 40/157 (25%)
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
I S+DS+ FH+NILGC NL + I A DSPNT+GIHIG S G I S IATGDDC+
Sbjct: 161 ITSLDSKNFHVNILGCNNLTFKGVNIIAPEDSPNTDGIHIGRSIGISILKSQIATGDDCI 220
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------- 153
SL GHGIS+GSLGK N+E V G+ V+NCT T
Sbjct: 221 SLGDGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWPA 280
Query: 154 -------------NIVTNNVENPIVIDQLYCPYNKCN 177
+I NV NPI+IDQ YCP+N+CN
Sbjct: 281 SPNAGIATDMHFSDITMVNVSNPILIDQEYCPWNQCN 317
>gi|226503988|ref|NP_001141594.1| exopolygalacturonase precursor [Zea mays]
gi|194705208|gb|ACF86688.1| unknown [Zea mays]
gi|414877547|tpg|DAA54678.1| TPA: exopolygalacturonase [Zea mays]
Length = 428
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 121/250 (48%), Gaps = 57/250 (22%)
Query: 52 FLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHS 111
++ + T++GIK ++S++FHINI ++ + D+ ITA AD NT+G+H+G S+ I++S
Sbjct: 183 YVTNGTVSGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNS 242
Query: 112 VIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-- 153
I TGDDCVS+ G GISVG LG+ ++++V +TVR+C T
Sbjct: 243 TIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTN 302
Query: 154 ----------------------NIVTNNVENPIVIDQLYCPYNKCNIKV--PSQVKTSNV 189
NI V NPI+IDQ +CP C K S V NV
Sbjct: 303 GVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKNV 362
Query: 190 RFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
F NI GTS + PC + + ++N Y G N K T ++CSN K T
Sbjct: 363 TFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNK-----TMAVCSNAKGTA 417
Query: 240 FGKQIPATCV 249
G C+
Sbjct: 418 KGSLQALDCL 427
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
F++ FGA +DG D ++A + W AC G + +L+P G YL
Sbjct: 61 FDISKFGATSDGKTDSTQAVQDTWTSACGAMG-DATMLIPKGDYL 104
>gi|225217013|gb|ACN85300.1| exopolygalacturonase precursor [Oryza coarctata]
Length = 413
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ N + + ++GI D+++FH+N+ C + ++ ITA +SPNT+GIH+G S+
Sbjct: 166 TLVLNSVKNGLVSGITLKDAKFFHMNMFRCKGVTISGGTITAPEESPNTDGIHMGDSSKI 225
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I + I TGDDC+S+ GHGISVGSLG+ ++++V +TV++C
Sbjct: 226 AIVGTTIGTGDDCISIGPGSEGITITGVTCGPGHGISVGSLGRYKDEKDVKDITVKDCVL 285
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI +V NPI+IDQ YCP C K S+V
Sbjct: 286 KNTSNGVRIKSYEDAISPITASKLTYENIKMEDVANPIIIDQKYCPNKICTSKGNSKVSI 345
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS ++K+PC + + ++ Y G N K T ++C+N +
Sbjct: 346 KDVTFKNITGTSSTPEAVSLLCSDKLPCSGVQMHDVKVEYAGTNNK-----TMAVCNNAQ 400
Query: 237 PTLFG 241
T G
Sbjct: 401 VTATG 405
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA+A+G D SKA AW+ AC G K +++P G +++ + +F
Sbjct: 46 FDITKLGAIANGRADSSKAVMEAWKAACGGAG-KQTIVIPRGDFMTGQLDF 95
>gi|12656894|gb|AAC28902.2| polygalacturonase 3, partial [Solanum lycopersicum]
Length = 365
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 115/225 (51%), Gaps = 49/225 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ ++G+ +S+ F I+I GC N+KL LK++A DSPNT+GIH+
Sbjct: 140 PDGTTALNFYKSNNIIMSGVTVQNSQKFQISIDGCRNVKLQGLKVSAPGDSPNTDGIHVK 199
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I S I TGDDC+S+ GHGIS+GSLG + V +T+
Sbjct: 200 LSSGVSIMKSQIGTGDDCISIGPGNSNLWIEGIACGPGHGISIGSLGWKKQESGVQNVTI 259
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ TF+GT +IV NV+NPI+IDQ YCP ++ S
Sbjct: 260 KTVTFSGTTNGVRVKTWARPSNGFVRNVLFQHIVMVNVKNPIIIDQNYCPNHQSCPHKGS 319
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYN 217
VK S+V + +I GTSA K+ PC I + ++N YN
Sbjct: 320 SVKISDVTYQDIHGTSATKVAVKIDCSKRNPCSGITLEDLNLSYN 364
>gi|218200142|gb|EEC82569.1| hypothetical protein OsI_27120 [Oryza sativa Indica Group]
Length = 394
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 121/261 (46%), Gaps = 60/261 (22%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
PPG ++ + N+ ++ + VDS+ H++I C + L L+I A ADSPNT+GIH+
Sbjct: 142 PPGT-TTLDISQSNNVSVKRVTLVDSKNVHVSIFDCAGVTLQGLRIAAPADSPNTDGIHV 200
Query: 101 GSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT 144
S + + + TGDDCVS+ GHGIS+GSLG + EV +T
Sbjct: 201 ALSRDVAVLGATVRTGDDCVSVGPGTSGVAIRNIRCGPGHGISIGSLGGRAGEGEVRNVT 260
Query: 145 VRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
V + + GT N+ +V+NPIV+DQ YCP NI P
Sbjct: 261 VESASLAGTQNGLRIKTWGKPFAGRVSGVRFANVAMRDVQNPIVVDQNYCPG---NINCP 317
Query: 182 SQ---VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPET 228
Q VK S+V + I GTSA + PC I + NIN Y+G G
Sbjct: 318 GQSSGVKISDVEYEGITGTSATAVAVRFDCSRSNPCTGIRLRNINLTYDGGG----GKPA 373
Query: 229 TSLCSNVKPTLFGKQIPATCV 249
S C N + G IP +C+
Sbjct: 374 RSFCKNAGGSASGVVIPPSCL 394
>gi|242058083|ref|XP_002458187.1| hypothetical protein SORBIDRAFT_03g028380 [Sorghum bicolor]
gi|241930162|gb|EES03307.1| hypothetical protein SORBIDRAFT_03g028380 [Sorghum bicolor]
Length = 404
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 122/262 (46%), Gaps = 60/262 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S++ D I+G+ SVDS +H+ I GC + + D++I A SPNT+GIH+
Sbjct: 149 PSGATSLKVLNSRDVVISGLTSVDSELYHVVINGCEGVTVQDVQIVAPGSSPNTDGIHVQ 208
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+ ++ + I TGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 209 GSSQVTVTRTGIQTGDDCVSVGPGTSNLRVEHVSCGPGHGISIGSLGKESEESGVENVTV 268
Query: 146 RNCTFTGT-------------------------NIVTNNVENPIVIDQLYCPYNKCNIKV 180
F GT + + ++V NPI+IDQ YCP +
Sbjct: 269 TGAAFVGTENGLRIKTWARAKVEGAYVRGVAFEHALMHDVRNPIIIDQSYCPNHGRGAGC 328
Query: 181 PSQ---VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPE 227
P Q VK S+VR+ +I+GTSA+K+ PC IG+ +I +G G
Sbjct: 329 PHQSSAVKISDVRYTDIQGTSASKVAVKFDCSASNPCSGIGLKDIKLTLDG------GKP 382
Query: 228 TTSLCSNVKPTLFGKQIPATCV 249
+ C + G+ P +C+
Sbjct: 383 AEATCQHADGRASGEVEPPSCL 404
>gi|363543457|ref|NP_001241738.1| exopolygalacturonase precursor [Zea mays]
gi|195624844|gb|ACG34252.1| exopolygalacturonase precursor [Zea mays]
Length = 428
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 121/250 (48%), Gaps = 57/250 (22%)
Query: 52 FLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHS 111
++ + TI+GIK ++S++FHINI ++ + D+ ITA AD NT+G+H+G S+ I++S
Sbjct: 183 YVTNGTISGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRITNS 242
Query: 112 VIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-- 153
I TGDDCVS+ G GISVG LG+ ++++V +TVR+C T
Sbjct: 243 TIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNTTN 302
Query: 154 ----------------------NIVTNNVENPIVIDQLYCPYNKCNIKV--PSQVKTSNV 189
NI V NPI+IDQ +CP C K S V +V
Sbjct: 303 GVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIKDV 362
Query: 190 RFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
F NI GTS + PC + + ++N Y G N K T ++CSN K T
Sbjct: 363 TFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNK-----TMAVCSNAKGTA 417
Query: 240 FGKQIPATCV 249
G C+
Sbjct: 418 KGSLQALDCL 427
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
F++ FGA +DG D ++ + W AC G + +L+P G YL
Sbjct: 61 FDISKFGATSDGKTDSTQVVQDTWTSACGAMG-DATMLIPKGDYL 104
>gi|399764472|gb|AFP50436.1| polygalacturonase 3, partial [Medicago marina]
Length = 236
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 105/196 (53%), Gaps = 45/196 (22%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ETAWR+ D K++ + ++ FNFL S + I S DS+ FH+N+LGC N
Sbjct: 44 ETAWRQN---DCSKNSTC--KRRSMNFGFNFLKHSIVRDITSKDSKNFHVNVLGCTNFTF 98
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ + ITA A S NT+GIHIG S ++ ++ IATGDDCVSL GHG
Sbjct: 99 DGVTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCVSLGGGSRQITVQNVYCGAGHG 158
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVE 161
ISVGSLGK +E V + V+NCT + T +I+ NV
Sbjct: 159 ISVGSLGKYPKEEAVEHVLVKNCTISNTDNGVRIKTWPSAPGTSPITDMHFEDIIMVNVL 218
Query: 162 NPIVIDQLYCPYNKCN 177
NP++IDQ YCP+N+C+
Sbjct: 219 NPVIIDQEYCPWNQCS 234
>gi|449506105|ref|XP_004162654.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 399
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 125/256 (48%), Gaps = 56/256 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++F+ + ++ + S++S+ FHI I GC N+ + LK+ A +SPNT+GIH+
Sbjct: 150 PSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGLKVLASGNSPNTDGIHVQ 209
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S I +S I TGDDC+S+ GHGIS+GSL K + ++ V +TV
Sbjct: 210 MSTDVAILNSKIGTGDDCISIGPGTSNLHIENIICGPGHGISIGSLAKDLQEDGVQNVTV 269
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+N F+ T +IV +NV+NPIVIDQ YCP +K + S
Sbjct: 270 KNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPEKAS 329
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
VK ++V + +I GTSA K+ PC I + N+ Y + + C
Sbjct: 330 GVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLDNVKLTYMNQTAQ-------ATC 382
Query: 233 SNVKPTLFGKQIPATC 248
+NV G P +C
Sbjct: 383 NNVGGIAAGLVQPTSC 398
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+NV +FGA DG D ++AF+T W AC + + VP G+Y
Sbjct: 33 YNVVNFGAKGDGRTDSTQAFQTVWSNACA-STKPTTIYVPRGRY 75
>gi|354549141|gb|AER27666.1| polygalacturonase [Pyrus pyrifolia]
gi|354549143|gb|AER27667.1| polygalacturonase [Pyrus pyrifolia]
Length = 459
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 129/269 (47%), Gaps = 69/269 (25%)
Query: 25 WREACNWDGIKSAVLVPPGKYL--SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
W+ +C K P GK ++ FN N+ + +K D++ H+ C+N++ +
Sbjct: 202 WKNSC-----KRKPQPPCGKQAPTAVTFNGCNNLVVKNLKIQDAQQMHVMFQNCFNVQAS 256
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGI 126
L +TA DSPNT+GIH+ ++ IS SVI TGDDC+S+ GHGI
Sbjct: 257 LLTVTAPEDSPNTDGIHVANTQNITISSSVIGTGDDCISIVSGSQRVQAKNITCGPGHGI 316
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPI 164
S+GSLGK + + V G+ V +GT N+ NNV NPI
Sbjct: 317 SIGSLGKDGSKDNVSGVLVNGAKLSGTTNGLRIKTWQGGSGSATNIVFQNVQMNNVTNPI 376
Query: 165 VIDQLYCPY--NKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNI 212
+IDQ YC + CN + S V+ NV + NIRGTSA+ +PCQ I + NI
Sbjct: 377 IIDQNYCDHKTKDCN-QQKSAVQVKNVLYQNIRGTSASGDAITVNCSQNVPCQGIVLQNI 435
Query: 213 NWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
+ NG+ + C+NV+P G
Sbjct: 436 Q-LQNGI----------AECNNVQPAYKG 453
>gi|399764456|gb|AFP50428.1| polygalacturonase 3, partial [Medicago rigiduloides]
Length = 236
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 104/195 (53%), Gaps = 45/195 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ETAWR+ D K++ + ++ F+FL S + I S DS+ FH+N+LGC N
Sbjct: 44 ETAWRQN---DCGKNSTC--KRRSMNFGFSFLKHSIVQDITSKDSKNFHVNVLGCTNFTF 98
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ ITA A S NT+GIHIG S ++ ++ IATGDDC+SL GHG
Sbjct: 99 DGFTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCISLGQGSRQITVQNVNCGPGHG 158
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVE 161
ISVGSLGK +E + + V+NCT + T +I+ NV+
Sbjct: 159 ISVGSLGKNPKEEAIEHVLVKNCTISNTDNGVRIKTWPSSPGTSPITDMHFEDIIMVNVQ 218
Query: 162 NPIVIDQLYCPYNKC 176
NP++IDQ YCP+N+C
Sbjct: 219 NPVIIDQEYCPWNQC 233
>gi|449453427|ref|XP_004144459.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 399
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 125/256 (48%), Gaps = 56/256 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++F+ + ++ + S++S+ FHI I GC N+ + LK+ A +SPNT+GIH+
Sbjct: 150 PSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGLKVLASGNSPNTDGIHVQ 209
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S I +S I TGDDC+S+ GHGIS+GSL K + ++ V +TV
Sbjct: 210 MSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISIGSLAKDLQEDGVQNVTV 269
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+N F+ T +IV +NV+NPIVIDQ YCP +K + S
Sbjct: 270 KNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPEKAS 329
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
VK ++V + +I GTSA K+ PC I + N+ Y + + C
Sbjct: 330 GVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKLTYMNQTAQ-------ATC 382
Query: 233 SNVKPTLFGKQIPATC 248
+NV G P +C
Sbjct: 383 NNVGGIAAGLVQPTSC 398
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+NV +FGA DG D ++AF+T W AC + + VP G+Y
Sbjct: 33 YNVVNFGAKGDGRTDSTQAFQTVWSNACA-STKPTTIYVPRGRY 75
>gi|297824381|ref|XP_002880073.1| hypothetical protein ARALYDRAFT_903792 [Arabidopsis lyrata subsp.
lyrata]
gi|297325912|gb|EFH56332.1| hypothetical protein ARALYDRAFT_903792 [Arabidopsis lyrata subsp.
lyrata]
Length = 393
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/273 (32%), Positives = 125/273 (45%), Gaps = 57/273 (20%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R A W K P G SI F++ N+ ++G+ S +S+ H+ + N+++ +++
Sbjct: 129 RGAGYWSCRKKGSHCPQGA-RSISFSWCNNVLLSGLTSFNSQNMHVTVHHSSNVRIQNIR 187
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
I A + SPNT+GIHI SS+G IS IATGDDC++L GHGIS+G
Sbjct: 188 IRAPSGSPNTDGIHIQSSSGVTISGGTIATGDDCIALSQGSRNVWIERVNCGPGHGISIG 247
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVI 166
SLG N+E V +TV + FT T N++ NNV NP++I
Sbjct: 248 SLGDYANEEGVQNVTVTSSVFTKTQNGVRIKTWARPSRGFVNNVVFRNLIMNNVGNPVII 307
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIP----------CQNIGIGNINWVY 216
DQ YCP + S VK S V F NI+GTS I C + + +I Y
Sbjct: 308 DQNYCPNGNGCPRQSSGVKISGVTFANIKGTSTTPIAMKLDCSGSSHCTGLRLQDIKLTY 367
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ S C N G +P C+
Sbjct: 368 -------MRRSSASYCRNAHGRASGVMVPRNCM 393
Score = 43.9 bits (102), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV+ +GA DG D +K+F TAW AC ++ V VP G YL
Sbjct: 30 FNVQRYGARGDGRTDATKSFLTAWSLACG-SRARAMVYVPRGTYL 73
>gi|356554595|ref|XP_003545630.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 290
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 121/274 (44%), Gaps = 99/274 (36%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY--------------L 46
+F+++ +GA+ +G D + + AWR+AC S V+VP GKY L
Sbjct: 20 LFDIRKYGAIPNG--DTTMDLQNAWRDAC-VSMTPSKVVVPSGKYKLRQIDFMGLIKLIL 76
Query: 47 SIRFNFLNDSTITG------------------------------------------IKSV 64
IRF ++N T+ G I
Sbjct: 77 RIRFGYINFLTLFGNGTFHGQGKMAWKQNNCAKNKNCKKLAMNFGFEMANNLVIXDITXK 136
Query: 65 DSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG- 123
D++YFH+N+ GC N+ + ++++ A +PNT+G HI +I++S T DDC+SLG
Sbjct: 137 DNKYFHVNVFGCXNITFTNFRVSSPAYNPNTDGTHIRKLTQVKITNSKXGTNDDCISLGD 196
Query: 124 ---------------HGISVGSLGKGINDEEVVGLTVRNCTFTGTN-------------- 154
HGISVGSLGK N+E V LT++NCT TN
Sbjct: 197 GSKEVTILNVTCEPRHGISVGSLGKYSNEESVEDLTIKNCTLKNTNNGLRIKTWPSTPIT 256
Query: 155 ----------IVTNNVENPIVIDQLYCPYNKCNI 178
I+ NV NPI+I Q YCP+N+C+I
Sbjct: 257 SLVPNLHFEDIIMINVNNPIIIGQEYCPWNQCSI 290
>gi|15218265|ref|NP_175004.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|12321533|gb|AAG50820.1|AC026757_1 polygalacturonase, putative [Arabidopsis thaliana]
gi|332193824|gb|AEE31945.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 125/253 (49%), Gaps = 56/253 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N + + + ITA DSPNT+GI +G
Sbjct: 148 PKLAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTV 267
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKC--NIK 179
R+ F GT NI +V PI IDQ YCP+ C K
Sbjct: 268 RDTVFNGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKK 327
Query: 180 VPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ +++ NI GTS N PC+N+ + +IN + G +E +T
Sbjct: 328 GKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG----LEKGHST 383
Query: 230 SLCSNVKPTLFGK 242
++C NV ++ GK
Sbjct: 384 AMCENVDGSVRGK 396
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ +G+ DG D++ AF + W+ AC S + VP G +
Sbjct: 30 VFNVRRYGSRPDGKTDNANAFTSVWKHACTRISGSSKIYVPKGTF 74
>gi|449453421|ref|XP_004144456.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 399
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 125/256 (48%), Gaps = 56/256 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++F+ + ++ + S++S+ FHI I GC N+ + LK+ A +SPNT+GIH+
Sbjct: 150 PSGATTLQFSNSKNVVVSALTSLNSQMFHIVIHGCQNVMMKGLKVLASGNSPNTDGIHVQ 209
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S I +S I TGDDC+S+ GHGIS+GSL K + ++ V +TV
Sbjct: 210 MSTDVAILNSKIGTGDDCISIGPGTSNLRIENIICGPGHGISIGSLAKDLQEDGVQNVTV 269
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+N F+ T +IV +NV+NPIVIDQ YCP +K + S
Sbjct: 270 KNVVFSRTQNGVRIKAWGKPSNGFARNILFQHIVMDNVQNPIVIDQNYCPSHKGCPEKAS 329
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
VK ++V + +I GTSA K+ PC I + N+ Y + + C
Sbjct: 330 GVKINDVTYQDIHGTSATKVAVKFDCSPINPCVRIKLENVKLTYMNQTAQ-------ATC 382
Query: 233 SNVKPTLFGKQIPATC 248
+NV G P +C
Sbjct: 383 NNVGGIAAGLVQPTSC 398
Score = 40.4 bits (93), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+NV +FGA DG D ++AF+T W AC + + VP G+Y
Sbjct: 33 YNVVNFGAKGDGRTDSTQAFQTVWSNACA-STKPTTIYVPRGRY 75
>gi|255576400|ref|XP_002529092.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531443|gb|EEF33276.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 394
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 124/257 (48%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ + I G+ S DS+ FHI I C N+K+ +K++A DSPNT+GIH+
Sbjct: 145 PTGATSLEFSNSKNIEINGLASEDSQKFHIVINSCQNVKVQSVKVSADGDSPNTDGIHVE 204
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+ I +S I TGDDCVS+ GHGIS+GSLGK ++ V +TV
Sbjct: 205 GSSSVTILNSKIGTGDDCVSIGPGTTNLWVENVACGPGHGISIGSLGKDNDEAGVQNVTV 264
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ TF+GT + V NV+NPIVIDQ YCP S
Sbjct: 265 KTTTFSGTQNGVRIKSWGRPSSGFAKNILFQHAVMTNVQNPIVIDQNYCPGESNCPGQES 324
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V + +I G+SA ++ PC I + ++ YN N E + C
Sbjct: 325 GVQISDVTYQDIHGSSATEVAVKFDCSRSTPCTGIELEDVKLTYN--NKPAE-----ASC 377
Query: 233 SNVKPTLFGKQIPATCV 249
N T G P++C+
Sbjct: 378 INAAGTASGVLQPSSCL 394
Score = 40.8 bits (94), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
++NV+++GA DG D +KAF AW +AC + + + VP G++ + F
Sbjct: 29 LYNVQNYGAKPDGSTDSTKAFLAAWADACGSNA-PATLYVPAGRFSLGKVEF 79
>gi|255576410|ref|XP_002529097.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531448|gb|EEF33281.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 388
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 128/255 (50%), Gaps = 62/255 (24%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI F++ ND I+G++S++S+ H+ I N+++ ++K+ A SPNT+GIH+ +S G
Sbjct: 144 SITFDWTNDVIISGLRSINSQTMHLVINNSNNVQVRNVKLIAPDQSPNTDGIHVQTSTGV 203
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ S + TGDDCVS+ GHGIS+GSLG+ +++ V +T+ + F
Sbjct: 204 TITGSTLQTGDDCVSIGPGTKNLLMSHIKCGPGHGISIGSLGREYDEDGVQNITLTDAVF 263
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ---V 184
G+ NI+ NV+NPI+IDQ YCP NI P+Q V
Sbjct: 264 IGSDNGVRIKTWARPSTSFVRNVLFQNIIMMNVKNPIIIDQDYCPD---NIGCPNQHSGV 320
Query: 185 KTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
K S + + NI+GTS + PC+ I + +I Y TS C N
Sbjct: 321 KISQITYKNIQGTSRSPQAVTFECSPSNPCREIELHDIKLTY-------MNKAATSSCKN 373
Query: 235 VKPTLFGKQIPATCV 249
+ T G IP +C+
Sbjct: 374 IAGTSSGLIIPESCL 388
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV +FGA DG D ++ F W ACN S V VP G+YL
Sbjct: 25 YNVLNFGAKPDGKTDSTQPFLKTWAAACN-SPTASTVYVPKGRYL 68
>gi|399764458|gb|AFP50429.1| polygalacturonase 3, partial [Medicago rigidula]
Length = 236
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 103/195 (52%), Gaps = 45/195 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ETAWR+ D K++ + ++ FNFL S + I S DS+ FH+N+LGC N
Sbjct: 44 ETAWRQN---DCGKNSTC--KRRSMNFGFNFLKHSIVQDITSKDSKNFHVNVLGCTNFTF 98
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ ITA A S NT+GIHIG S ++ ++ IATGDDC+SL GHG
Sbjct: 99 DGFTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCISLGQGSRQITVQNVNCGPGHG 158
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVE 161
ISVGSLGK +E + + V+NCT + T +I+ NV+
Sbjct: 159 ISVGSLGKNPKEEAIEHVLVKNCTISNTDNGVRIKTWPSSPGTSPITDMHFEDIIMVNVQ 218
Query: 162 NPIVIDQLYCPYNKC 176
NP++IDQ YCP+ +C
Sbjct: 219 NPVIIDQEYCPWXQC 233
>gi|15218267|ref|NP_175005.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|12321537|gb|AAG50824.1|AC026757_5 polygalacturonase, putative [Arabidopsis thaliana]
gi|332193825|gb|AEE31946.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 444
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 125/253 (49%), Gaps = 56/253 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++ F F+N+S I I S++S+ H N + + + ITA DSPNT+GI +G
Sbjct: 148 PELAMTMGFAFVNNSRIKDITSLNSKMGHFNFFSVHRFNITGVTITAPGDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + IS++ I TGDDC+++ GHGISVGSLGK ++++V LTV
Sbjct: 208 SCSNIHISNTNIGTGDDCIAILSGTTNLDISNVKCGPGHGISVGSLGKNKDEKDVKHLTV 267
Query: 146 RNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKC--NIK 179
R+ F GT NI +V PI IDQ YCP+ C K
Sbjct: 268 RDTVFNGTSDGIRIKTWESSASKLVVSNFIYENIQMIDVGKPINIDQKYCPHPPCEHEKK 327
Query: 180 VPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETT 229
S V+ +++ NI GTS N PC+N+ + +IN + G +E +T
Sbjct: 328 GKSHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINLKHTG----LEKGHST 383
Query: 230 SLCSNVKPTLFGK 242
++C NV ++ GK
Sbjct: 384 AMCENVDGSVRGK 396
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ +G+ DG D++ AF + W+ AC S + VP GK+
Sbjct: 30 VFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGKF 74
>gi|413943677|gb|AFW76326.1| hypothetical protein ZEAMMB73_463400 [Zea mays]
Length = 424
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 124/259 (47%), Gaps = 69/259 (26%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINIL--------------GCYNLKLNDLKITAHADS 92
S+ +F+N+ ++G+ ++S++FH+ L C ++ + D+ +TA DS
Sbjct: 163 SLVMDFVNNEEVSGVTLLNSKFFHMKALTSRGRVKAEAEEMYQCKDMLIKDVTVTALGDS 222
Query: 93 PNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGIN 136
PNT+GIH+G S+G I+++VI+ DDC+S GHGIS+GSLG+ +
Sbjct: 223 PNTDGIHMGDSSGITITNTVISVSDDCISFSPGTSKVNITGVTYGSGHGISIGSLGRYKD 282
Query: 137 DEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVIDQLYCP 172
+++ + V++CT T NI + NPI ID YCP
Sbjct: 283 EKDDTNINVKDCTLKKTTFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCP 342
Query: 173 YNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVK 222
C S+V +V F NI GTS+ KIPC + + +IN Y+G N K
Sbjct: 343 NKLCTANDASKVTVKDVTFKNITGTSSTPEAVSLLCSAKIPCTGVTMDDINVEYSGTNNK 402
Query: 223 VEGPETTSLCSNVKPTLFG 241
T ++C+N K + G
Sbjct: 403 -----TMAICTNAKGSTKG 416
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 23/178 (12%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGDTG-KQTILIPKGDFLVGQLNFTGPCKGDVT 99
Query: 62 KSVDSRYFHINILGCYN--------LKLNDLKITAHADSPNTEGIHIGSSNGSEI-SHSV 112
VD L Y L++++L IT N +G+ G + S +
Sbjct: 100 IHVDGNLLATMDLSQYKEHGNWIEILRVDNLVITGKG---NLDGL------GPAVWSKNS 150
Query: 113 IATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLY 170
A DC L + + + +N+EEV G+T+ N F +T+ +++Y
Sbjct: 151 CAKKYDCKILPNSLVMDF----VNNEEVSGVTLLNSKFFHMKALTSRGRVKAEAEEMY 204
>gi|166951|gb|AAA32914.1| polygalacturonase [Persea americana]
Length = 453
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 132/277 (47%), Gaps = 59/277 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ET W +C + L ++ F + ++ + DS+ H++ C ++
Sbjct: 187 ETWWDSSCK----RKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIA 242
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
++L +TA SPNT+GIHI + + +SVI TGDDC+S+ GHG
Sbjct: 243 SNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHG 302
Query: 126 ISVGSLGKGINDEEVVGLTV------------RNCTFTG----------TNIVTNNVENP 163
IS+GSLG ++ V G+ V R T+ G NIV +NV NP
Sbjct: 303 ISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNP 362
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNIN 213
I+IDQ YC + S VK SNV + NIRGTSA+++ PCQ I + NIN
Sbjct: 363 IIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGILLENIN 422
Query: 214 WVYNGVNVKVEGPETTSLCSN-VKPTLFGKQIPATCV 249
V NG G ETT CSN V+ T GK P +C+
Sbjct: 423 LVGNG------GKETTMSCSNIVQGTTEGKVYPPSCL 453
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNF 52
+V DFGA DG DD+KAFE AW++AC+ S ++VP K YL + F
Sbjct: 85 ISVDDFGARGDGT-DDTKAFEKAWKDACS---SGSVLIVPENKNYLLKQITF 132
>gi|449498572|ref|XP_004160574.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 227
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 112/230 (48%), Gaps = 55/230 (23%)
Query: 69 FHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------ 122
FH ++ CYN ++KITA +SPNT+G+H+ +S I++SVI TGDDCVS+
Sbjct: 3 FHTSVFYCYNFTATNMKITAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTEN 62
Query: 123 ----------GHGISVGSLGKGINDEEVVGLTVRNCT-FTGTN----------------- 154
GHG+SVGSLGK ++ V + V+NCT F TN
Sbjct: 63 ITVTNVTCGPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPISGLASR 122
Query: 155 -----IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI------- 202
IV V+NPI+IDQ Y S K SNV+F NIRGTS +
Sbjct: 123 IIFEDIVMYGVKNPIIIDQTY----GTKKSEESNWKVSNVQFKNIRGTSTTNVAVLLECS 178
Query: 203 ---PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC+ + + +IN Y G N++ S CSN K FG Q P CV
Sbjct: 179 KLFPCEGVELRDINLSYGGSNLR--NSTIVSSCSNAKIATFGVQNPPPCV 226
>gi|224109162|ref|XP_002315106.1| predicted protein [Populus trichocarpa]
gi|222864146|gb|EEF01277.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 123/257 (47%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ I G+ S++S+ FHI I GC N+++ +++ A DSPNT+GIH+
Sbjct: 148 PAGATTLSFVNSNNIKINGLLSLNSQMFHIVINGCQNVQVQGVRVIAAGDSPNTDGIHVQ 207
Query: 102 SSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTV 145
S I +S I TGDDC+S+G HGIS+GSL K +++ V +TV
Sbjct: 208 LSTDVVIMNSSIKTGDDCISIGPGTKNLWIERVRCGPGHGISIGSLAKTMDEAGVQNVTV 267
Query: 146 RNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPS 182
++ FTGT NV+NPI+IDQ YCP+N S
Sbjct: 268 KSTIFTGTTNGFRIKSWARHSTGFAQAIRFIGATMINVQNPIIIDQNYCPHNLNCPNEVS 327
Query: 183 QVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
++ S+V + IRGTSA K PC+ I + N+N Y E S C
Sbjct: 328 GIQISDVIYQGIRGTSATPVAIKFDCSFKYPCKGITLQNVNLTY-------LNKEAQSTC 380
Query: 233 SNVKPTLFGKQIPATCV 249
+N + G+ P C+
Sbjct: 381 TNAIGKISGQVQPDNCL 397
>gi|212275802|ref|NP_001130136.1| uncharacterized protein LOC100191230 precursor [Zea mays]
gi|194688374|gb|ACF78271.1| unknown [Zea mays]
gi|223946699|gb|ACN27433.1| unknown [Zea mays]
gi|224033665|gb|ACN35908.1| unknown [Zea mays]
gi|413948197|gb|AFW80846.1| exopolygalacturonase [Zea mays]
Length = 416
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 122/254 (48%), Gaps = 58/254 (22%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ F+ +N +T+ GIK ++S++FHINI ++ + D+ ITA AD NT+G+H+G S+
Sbjct: 168 VLFHVIN-ATVAGIKLLNSKFFHINIDNSESITVKDVNITAPADVENTDGVHVGGSSKIS 226
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I +S I TGDDCVS+ G GISVG LG+ ++++V +TVRNC
Sbjct: 227 ILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNCVLK 286
Query: 152 GT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKV--PSQVK 185
T NI V NPIVIDQ +CP C K S V
Sbjct: 287 NTTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHVS 346
Query: 186 TSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+V F NI GTS + PC + + ++N Y G N K T ++CSN
Sbjct: 347 VKDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNK-----TMAVCSNA 401
Query: 236 KPTLFGKQIPATCV 249
K T G C+
Sbjct: 402 KGTAKGSIEALACL 415
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +DG D +KA + AW AC G + V++P G YL NF
Sbjct: 48 FDISKLGATSDGKTDCTKAVQDAWTSACEATG-SATVVIPKGDYLVGPLNF 97
>gi|359481676|ref|XP_003632658.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 368
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 130/274 (47%), Gaps = 62/274 (22%)
Query: 22 ETAWREAC--NWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 79
+T W +C N+D L G ++ F + + +K +++ H++ C +
Sbjct: 104 KTWWENSCKVNYD------LPCKGAPTALTFYNCKNLAVKNLKIQNAQQMHVSFEKCVGV 157
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------G 123
+ + L ITA +SPNT+GIH+ + +IS SVI TGDDC+S+ G
Sbjct: 158 QASGLTITAPGNSPNTDGIHVSYTKIIQISSSVIGTGDDCISIVSGSQKVQVNGITCGPG 217
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVE 161
HGIS+GSLG G ++ V +TV T +GT NIV +NVE
Sbjct: 218 HGISIGSLGSGDSEAHVSDVTVNGATLSGTTNGVRIKTWQGGSGSASNIKFQNIVMHNVE 277
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGN 211
NPI+IDQ YC +K S V+ NV + NI+GTS++ K PCQ I + +
Sbjct: 278 NPIIIDQKYCDQSKPCKSQSSAVQVQNVLYQNIKGTSSSKEAISLDCSAKFPCQGILLRD 337
Query: 212 INWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
I+ G G ++CSN + T+ G P
Sbjct: 338 IDIKVGG------GKAAKAVCSNARVTVMGDVSP 365
>gi|62733049|gb|AAX95166.1| Polygalacturonase (pectinase) [Oryza sativa Japonica Group]
gi|77549576|gb|ABA92373.1| Polygalacturonase precursor, putative, expressed [Oryza sativa
Japonica Group]
Length = 393
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 121/261 (46%), Gaps = 60/261 (22%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
PPG ++ + N+ ++ + VDS+ H++I C + L ++I A ADSPNT+GIH+
Sbjct: 141 PPGT-TTLDISQSNNVSVKRVTLVDSKNVHVSIFDCAGVTLQGVRIAAPADSPNTDGIHV 199
Query: 101 GSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT 144
S + + + TGDDCVS+ GHGIS+GSLG + EV +T
Sbjct: 200 ALSRDVAVLSATVRTGDDCVSVGPGTSGVAIRNIRCGPGHGISIGSLGGRAGEGEVRNVT 259
Query: 145 VRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
V + + GT N+ +V+NPIV+DQ YCP N+ P
Sbjct: 260 VESASLAGTQNGLRIKTWGKPFAGRVSGVRFANVAMRDVQNPIVVDQNYCPG---NVNCP 316
Query: 182 SQ---VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPET 228
Q VK S+V + I GTSA + PC I + NIN Y+G G
Sbjct: 317 GQSSGVKISDVEYEGITGTSATAVAVRFDCSGSNPCTGIRLRNINLTYDGGG----GKPA 372
Query: 229 TSLCSNVKPTLFGKQIPATCV 249
S C N + G IP +C+
Sbjct: 373 RSFCKNAGGSASGVVIPPSCL 393
>gi|1346705|sp|P48979.1|PGLR_PRUPE RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|436420|emb|CAA54150.1| endopolygalacturonase [Prunus persica]
Length = 393
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 131/257 (50%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ S++S+ FHI I N+++ ++++ +SPNT+GIH+
Sbjct: 144 PSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 204 MSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTV 263
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNKCNIKVPS 182
+ TF+GT NI+ NVENPIVIDQ YCP NK S
Sbjct: 264 KTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVS 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V + +I GTSA ++ PC+ I + ++ Y K + E++ C
Sbjct: 324 GVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTY-----KNQAAESS--C 376
Query: 233 SNVKPTLFGKQIPATCV 249
S+ T G P +C+
Sbjct: 377 SHADGTTEGVVQPTSCL 393
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+NV GA ADG D +KAF +AW +AC + VP G + FL D +G
Sbjct: 28 YNVASLGAKADGKTDSTKAFLSAWAKACA-SMNPGVIYVPAGTF------FLRDVVFSG 79
>gi|297848486|ref|XP_002892124.1| hypothetical protein ARALYDRAFT_887420 [Arabidopsis lyrata subsp.
lyrata]
gi|297337966|gb|EFH68383.1| hypothetical protein ARALYDRAFT_887420 [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 135/278 (48%), Gaps = 71/278 (25%)
Query: 22 ETAWR-EACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 80
E W+ + C G K +PP S++F + + I GI SV+++ FH+ ++ N+
Sbjct: 151 EAVWKADGC---GKKVQCNLPP---TSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVN 204
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
+ ++K+ A A+SPNT+GIH+ +++ I S IATGDDCVS+ GH
Sbjct: 205 IQNIKLIAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGH 264
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVE 161
G+SVGSLGK N+E+V G+ V NCT T NI+ +V+
Sbjct: 265 GLSVGSLGKYKNEEDVSGIHVNNCTMVETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVK 324
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
NPI+IDQ Y SQV S++ F NIRGT+ K +PC+ + + +
Sbjct: 325 NPIIIDQNYGSRGG-----DSQVAISDILFKNIRGTTITKDIVQIMCSKSVPCKGVNVVD 379
Query: 212 INWVYNGVNVKVEGPETTS-------LCSNVKPTLFGK 242
+N Y G K G + +S LC N GK
Sbjct: 380 VNLNYVG---KTGGEKKSSSGGLVGALCDNANVIFGGK 414
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
V+++ FGAV DG + KAF W + C+ + + +LVP G++L+
Sbjct: 51 VYDITKFGAVGDGSTNTFKAFLNTWIQVCD-SPVPATLLVPKGQFLA 96
>gi|15081600|gb|AAK81876.1| polygalacturonase PG1 [Vitis vinifera]
gi|297739677|emb|CBI29859.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 130/274 (47%), Gaps = 62/274 (22%)
Query: 22 ETAWREAC--NWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 79
+T W +C N+D L G ++ F + + +K +++ H++ C +
Sbjct: 180 KTWWENSCKVNYD------LPCKGAPTALTFYNCKNLAVKNLKIQNAQQMHVSFEKCVGV 233
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------G 123
+ + L ITA +SPNT+GIH+ + +IS SVI TGDDC+S+ G
Sbjct: 234 QASGLTITAPGNSPNTDGIHVSYTKIIQISSSVIGTGDDCISIVSGSQKVQVNGITCGPG 293
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVE 161
HGIS+GSLG G ++ V +TV T +GT NIV +NVE
Sbjct: 294 HGISIGSLGSGDSEAHVSDVTVNGATLSGTTNGVRIKTWQGGSGSASNIKFQNIVMHNVE 353
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGN 211
NPI+IDQ YC +K S V+ NV + NI+GTS++ K PCQ I + +
Sbjct: 354 NPIIIDQKYCDQSKPCKSQSSAVQVQNVLYQNIKGTSSSKEAISLDCSAKFPCQGILLRD 413
Query: 212 INWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
I+ G G ++CSN + T+ G P
Sbjct: 414 IDIKVGG------GKAAKAVCSNARVTVMGDVSP 441
>gi|242037693|ref|XP_002466241.1| hypothetical protein SORBIDRAFT_01g004190 [Sorghum bicolor]
gi|241920095|gb|EER93239.1| hypothetical protein SORBIDRAFT_01g004190 [Sorghum bicolor]
Length = 455
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/252 (32%), Positives = 124/252 (49%), Gaps = 57/252 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F++ + + +K V+S+ H+++ N++L L ITA SPNT+GIHI S
Sbjct: 187 ALSFHYCTNLRVDNLKIVNSQQIHMSVEDSTNVQLAKLSITAPGTSPNTDGIHITRSKDV 246
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+++ I TGDDC+S+ GHGIS+GSLG + +V G+T+ +
Sbjct: 247 RVTNCKIKTGDDCISIEDGTHKLHVSNVVCGPGHGISIGSLGDDNSRAQVSGITIDSVQL 306
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
GT N++ NV+NPI+IDQ YC K + S V+ SN
Sbjct: 307 HGTTNGARIKTYQGGSGYAKDITFQNMIMYNVKNPIIIDQNYCDKAKPCREQRSAVQISN 366
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPE--TTSLCSNVK 236
V F NIRGT+ K +PCQ I + NI ++K++G + T S C N K
Sbjct: 367 VVFKNIRGTTITKDAIKMHCSKNVPCQGITLQNI-------DLKMQGGKGNTESTCQNAK 419
Query: 237 PTLFGKQIPATC 248
+GK +P C
Sbjct: 420 WRKYGKVVPQPC 431
>gi|34850203|dbj|BAC87792.1| putative polygalacturonase [Daucus carota]
Length = 388
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 109/200 (54%), Gaps = 39/200 (19%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F N I+G+ S++S+ FH+ I GC+N+KL+ ++++A SPNT+GIH+
Sbjct: 140 PEGITSLAFYNSNKIIISGLASLNSQMFHVVIDGCHNVKLDGIRVSASGKSPNTDGIHLQ 199
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+G + S I+TGDDC+S+ GHGIS+GSLG + + V +TV
Sbjct: 200 SSSGVTVLSSHISTGDDCISMGPGNSNVWIENIACGPGHGISIGSLGWELQEPGVQNVTV 259
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
++ TFTGT +I +V+NP++IDQ YCP K S
Sbjct: 260 KSVTFTGTENGVRIKTWARPTKGFVKDVLFQHIQMVDVQNPVIIDQNYCPGEKNCPHQVS 319
Query: 183 QVKTSNVRFNNIRGTSANKI 202
+K S V + +I GTSA ++
Sbjct: 320 DIKISGVTYQDIHGTSATEV 339
>gi|242053095|ref|XP_002455693.1| hypothetical protein SORBIDRAFT_03g021050 [Sorghum bicolor]
gi|241927668|gb|EES00813.1| hypothetical protein SORBIDRAFT_03g021050 [Sorghum bicolor]
Length = 413
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 119/250 (47%), Gaps = 57/250 (22%)
Query: 52 FLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHS 111
++ + T++GIK ++S++FHINI N+ + D+ ITA D NT+G+H+G S I++S
Sbjct: 168 YVTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNS 227
Query: 112 VIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-- 153
I TGDDC+S+ G GIS+G LG+ ++++V +TVR+C T
Sbjct: 228 TIGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTN 287
Query: 154 ----------------------NIVTNNVENPIVIDQLYCPYNKCNIKV--PSQVKTSNV 189
NI V NPI+IDQ +CP C K S V +V
Sbjct: 288 GVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVCPGKKSDSSHVIVKDV 347
Query: 190 RFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
F NI GTS + PC + + ++N Y G N K T ++CSN K T
Sbjct: 348 TFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNK-----TMAVCSNAKGTA 402
Query: 240 FGKQIPATCV 249
G C+
Sbjct: 403 KGSVEALACL 412
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFL 53
F++ GA DG D +KA + AW AC G + VL+P G YL NF+
Sbjct: 46 FDISKLGATGDGKTDSTKAVQDAWTSACRATG-SATVLIPKGDYLVGPLNFV 96
>gi|2459817|gb|AAC28906.1| polygalacturonase 5 [Solanum lycopersicum]
Length = 387
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/235 (34%), Positives = 119/235 (50%), Gaps = 50/235 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS P G ++ F N+ + G+ +S+ FHI + GC+N + +K+ A
Sbjct: 128 WTCKKSQKNCPIGT-TALAFYNSNNIVMNGVIVQNSQMFHILVDGCHNAMIQGVKVLAPG 186
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ SS+G I +S I TGDDC+S+ GHGIS+GSLG
Sbjct: 187 NSPNTDGIHVQSSSGVSIRNSNIGTGDDCISIGPGNSNLWIEGIACGPGHGISIGSLGWE 246
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
++ V +TV+ TFTGT +IV +NV+NPI+IDQ YC
Sbjct: 247 SKEQGVQNVTVKTVTFTGTQNGVRVKTWARPSSGFVRHVLFQHIVMSNVQNPIIIDQNYC 306
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
P ++ S VK S+V + +I GTSA ++ PC I + N+N Y
Sbjct: 307 PNHESCPHQGSGVKISDVTYQDIHGTSATEVAVKLDCSKTNPCSGITLDNVNLSY 361
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDST 57
++NV+++GA ++G D SKAF +AW AC S + VP G YL IR + N T
Sbjct: 21 IYNVQNYGAKSNGKIDSSKAFLSAWGSACA-STSASTIYVPRGIYL-IRKIYFNGQT 75
>gi|399764470|gb|AFP50435.1| polygalacturonase 3, partial [Medicago sativa subsp. caerulea]
Length = 236
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 102/195 (52%), Gaps = 45/195 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ETAWR+ D K++ + ++ FNFL S + I S DS+ FH+N+LGC N
Sbjct: 44 ETAWRQN---DCGKNSTC--KRRSMNFGFNFLKHSIVRDITSKDSKNFHVNVLGCTNFTF 98
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ ITA A S NT+GIHIG S ++ ++ IATGDDCVSL GHG
Sbjct: 99 DGFTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCVSLGDGSRQITVQNVNCGPGHG 158
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVE 161
ISVGSLGK +E V + V NCT + T +I+ NV
Sbjct: 159 ISVGSLGKYPKEEAVEHVLVXNCTXSNTANGVRIKTWPSSPGTSPITDMHFEDIIMVNVL 218
Query: 162 NPIVIDQLYCPYNKC 176
NP++IDQ YCP+N+C
Sbjct: 219 NPVIIDQEYCPWNQC 233
>gi|297841087|ref|XP_002888425.1| hypothetical protein ARALYDRAFT_894135 [Arabidopsis lyrata subsp.
lyrata]
gi|297334266|gb|EFH64684.1| hypothetical protein ARALYDRAFT_894135 [Arabidopsis lyrata subsp.
lyrata]
Length = 397
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 122/257 (47%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++RF D I G+ S++S+ FHI I C N+K+ D++I A +SPNT+GIHI
Sbjct: 148 PEGATTLRFMDSYDVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTDGIHIQ 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S E+ ++ I TGDDC+S+ GHGIS+GSL K ++ V +TV
Sbjct: 208 LSTDIEVQNASIKTGDDCISIGPGTKNLMVDGITCGPGHGISIGSLAKSTEEQGVENVTV 267
Query: 146 RNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ F T+ + NV PI+IDQ YCP + S
Sbjct: 268 KRAVFVRTDNGLRIKSWPRHSNGFVERVRFLGALMVNVSYPILIDQNYCPGDSSCPSQES 327
Query: 183 QVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
+K ++V ++ I+GTSA K +PC I + IN Y G E ET+ C
Sbjct: 328 GIKINDVIYSGIKGTSATKVAIKMDCSEQVPCTGIRMQAINLNYYG-----EAAETS--C 380
Query: 233 SNVKPTLFGKQIPATCV 249
+NV G P+ CV
Sbjct: 381 TNVSGKQLGLVTPSGCV 397
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL--VPPGKYL---SIRFN 51
NV FGA +G+ D KAF AW AC G+ +V+ VP G+YL +RF
Sbjct: 31 LNVLSFGAKPNGMVDSVKAFSDAWDAAC---GVADSVVIYVPKGRYLVSGEVRFE 82
>gi|297734027|emb|CBI15274.3| unnamed protein product [Vitis vinifera]
Length = 387
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 143/347 (41%), Gaps = 120/347 (34%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP------------PGKYLSIR 49
FNV D+GA+ +G DDS+AF AW + C LVP G+ S +
Sbjct: 26 FNVMDYGAIGNGRTDDSEAFMKAWSDVCKASA-SPTFLVPGDRRFLINPVVFEGRCRSKK 84
Query: 50 FNFLNDSTITG-------------------IKSVD------------------------- 65
F D TIT K VD
Sbjct: 85 IKFKVDGTITAPSEPSKWKCINKQCHSWISFKHVDGLVISDCMYSLTNLQALVVARSNNV 144
Query: 66 ---------SRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG 116
+ + H+ C +K++ + I A DSPNT+GIH+ + I H I TG
Sbjct: 145 QLHDLSFKDNPHMHVVFHHCDGVKISHISIDAPEDSPNTDGIHLKETASVIIEHCTIGTG 204
Query: 117 DDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------- 153
DDC+SL GHGIS+GSLGK E V + V++ FTGT
Sbjct: 205 DDCISLVDGSTHIDMRHIKCGPGHGISIGSLGKFGLSETVEYIHVKDAQFTGTTNGVRIK 264
Query: 154 ---------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS 198
I +++ E PI+IDQ YC + +C+ K P+ V+ N+ + +++GTS
Sbjct: 265 TWQGGRGHARNMIFEKIRSSDSEYPIIIDQFYCDHTECHDK-PNAVEIRNISYIDVKGTS 323
Query: 199 ----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
++ +PC++I I NIN +Y+ G + ++ C NV
Sbjct: 324 KKETAVKIACSDTVPCRDIFIQNINLIYDQ-----SGKQASAYCKNV 365
>gi|15225765|ref|NP_180230.1| pectin lyase-like protein [Arabidopsis thaliana]
gi|2739388|gb|AAC14511.1| putative polygalacturonase [Arabidopsis thaliana]
gi|330252774|gb|AEC07868.1| pectin lyase-like protein [Arabidopsis thaliana]
Length = 402
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 130/258 (50%), Gaps = 54/258 (20%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +S+ F F+N+S I I S++S+ H N ++ + + ITA +DSPNT+GI +G
Sbjct: 148 PKLAISMGFAFVNNSNIKDITSLNSKMGHFNFFFVHHFNITGVTITAPSDSPNTDGIKMG 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + +IS++ I TGDDC+++ GHGISVGSLGK ++++V L V
Sbjct: 208 SCSNIQISNTNIGTGDDCIAILSGTTKLNISNINCGPGHGISVGSLGKNKDEKDVKDLFV 267
Query: 146 RNCTFTGT-------------------NIVTNNVE-----NPIVIDQLYCPYNKCNIKVP 181
R+ F GT N V N++ PI IDQ YCP+ C +
Sbjct: 268 RDVIFNGTSDGIRIKTWESSASKILVSNFVYENIQMIDVGKPINIDQKYCPHPPCEHERK 327
Query: 182 SQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSL 231
S V+ +++ NI GTS NK+ PC+N+ + +IN NG +E + ++
Sbjct: 328 SHVQIQDLKLKNIYGTSKNKVAVNLQCSKSFPCKNVELIDINIKQNG----LEDGSSITV 383
Query: 232 CSNVKPTLFGKQIPATCV 249
C NV GK P C+
Sbjct: 384 CENVDGFARGKMFPQHCL 401
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV+ G+ DG D++ AF + W AC S + VP G +
Sbjct: 30 VFNVQRHGSKPDGKTDNTNAFTSIWSRACKRISGSSKIYVPKGTF 74
>gi|399764464|gb|AFP50432.1| polygalacturonase 3, partial [Medicago arabica]
Length = 236
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 101/195 (51%), Gaps = 45/195 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ETAWR N G S + ++ FNFL S + I S DS+ FH+N+LGC N
Sbjct: 44 ETAWR--LNDCGKNSKC---KRRSMNFGFNFLKHSIVRDITSKDSKNFHVNVLGCTNFTF 98
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ ITA A S NT+GIHIG S ++ ++ IATGDDC+SL GHG
Sbjct: 99 DGFTITAPATSINTDGIHIGRSTDVKVLNTNIATGDDCISLGQGSRQIIVQNVNCGPGHG 158
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVE 161
ISVGSLGK +E V + V+NCT + T +I+ NV+
Sbjct: 159 ISVGSLGKNPKEEAVEHVLVKNCTISNTDNGLRIKTWPNSPGTSPITDMHFEDIIMVNVK 218
Query: 162 NPIVIDQLYCPYNKC 176
P++IDQ YCP+N+C
Sbjct: 219 TPVIIDQEYCPWNQC 233
>gi|357475149|ref|XP_003607860.1| Polygalacturonase [Medicago truncatula]
gi|355508915|gb|AES90057.1| Polygalacturonase [Medicago truncatula]
Length = 448
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 111/219 (50%), Gaps = 49/219 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F+ + I+G+ S++S+ FHI GC N+K+ + I A +SPNT+GIH+ S+
Sbjct: 130 TLEFSNSKNIMISGLTSMNSQMFHIVFNGCENVKMQGVNIMAAGNSPNTDGIHVQMSSHV 189
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +S I TGDDC+S+ GHGIS+GSLG +N+ V +TV+ TF
Sbjct: 190 TIVNSKIRTGDDCISIGPGTSNLWIENIACGPGHGISIGSLGWKLNEPGVQNVTVKTVTF 249
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
TGT + + NV+NPIVIDQ YCP NK S +K S
Sbjct: 250 TGTQNGVRIKSWGRPSNGFVRNIFFQDAIMVNVQNPIVIDQNYCPNNKGCPGQASGIKVS 309
Query: 188 NVRFNNIRGTSA----------NKIPCQNIGIGNINWVY 216
V + NI GTSA +K PC I + ++ Y
Sbjct: 310 GVTYQNIHGTSATQVAVKFDCSSKYPCSGIKMKDVKLTY 348
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV ++GA DG D +KAF W +AC+ +++ VP GK+L
Sbjct: 9 YNVINYGAKPDGKTDSTKAFGNVWAKACS-SPYPASIYVPQGKFL 52
>gi|359483063|ref|XP_003632896.1| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 403
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 157/362 (43%), Gaps = 123/362 (33%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS------------- 47
+++V ++GAV DG DDS+AF AW EACN ++ + VP +L
Sbjct: 36 LYDVMNYGAVGDGKTDDSQAFLKAWNEACNVQQQRATLNVPARTFLLNPIEFSGPCVPTS 95
Query: 48 -----------------------IRFNFLNDSTITGIKSVDS---------------RYF 69
I F+++ T+TG ++D +++
Sbjct: 96 IEFQVAGKIIASTNKSLFDNNHWILFSYVKGLTLTGSGTIDGQGAGSWQDRTGVAALKFY 155
Query: 70 ------------------HINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHS 111
HI + C +N + ITA D+PNT+GI I SSN ++ +S
Sbjct: 156 TCPNLVLQGLTHINPQKAHIILTKCDGANINSITITAPEDAPNTDGIDIASSNHVQVQNS 215
Query: 112 VIATGDDCVSL----------------GHGISVGSLGK-GINDEEVVG-LTVRNCTFTGT 153
I TGDDC+++ GHGIS+GSLG G D + V + VR+C FTGT
Sbjct: 216 KIGTGDDCIAISARCSFINITGVTCGPGHGISIGSLGDPGSGDFDTVSEVHVRSCNFTGT 275
Query: 154 N-----------------------IVTNNVENPIVIDQLYCPYNKC-NIKVPSQVKTSNV 189
N I+ +NV PIVIDQ YCP+N C N S V S+V
Sbjct: 276 NTTGIRIKTWQGGQGEVKKITYEDIMFDNVRYPIVIDQFYCPHNVCKNNTGTSAVAISDV 335
Query: 190 RFNNIRGTSA-NKIPCQNIGIGNI--NWVYNGVNVKVEGPETTS---------LCSNVKP 237
+ I GTS+ +++ N G + N V + V++K P T+ + SNV+P
Sbjct: 336 SYTGIIGTSSGDEVMSLNCGTESSCNNIVLDDVHLKTSDPTKTAFVRCVNFNGIASNVEP 395
Query: 238 TL 239
+L
Sbjct: 396 SL 397
>gi|356503157|ref|XP_003520378.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 391
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 119/235 (50%), Gaps = 50/235 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W +S P G ++ F N+ I G+ S++S+ FHI I C N+KL +K++A
Sbjct: 132 WACKRSGKTCPTGA-TNLGFTNSNNIVINGVTSLNSQMFHIVIDRCNNVKLQGIKVSAAG 190
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S+ I +S IATGDDC+S+ GHGISVGSLGK
Sbjct: 191 NSPNTDGIHVQLSSTVTILNSNIATGDDCISIGPGTTNLWIENIACGPGHGISVGSLGKE 250
Query: 135 INDEEVVGLTVRNCTFTGT------------------NIVTN-----NVENPIVIDQLYC 171
+ V +TV+ TFTGT NI+ NV+NPIVIDQ YC
Sbjct: 251 FQEPGVQNVTVKTMTFTGTENGVRIKSWGRPSNGFARNILFQHATMVNVQNPIVIDQNYC 310
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
P+ K S V+ SNV + +I GTSA +I PC I + ++ Y
Sbjct: 311 PHEKNCPGQVSGVEVSNVIYQDIYGTSATEIAVKINCSPKYPCIGISLEDVMLTY 365
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
NV +FGA DG D + AF +AW AC+ + + VP G++L
Sbjct: 27 LNVVNFGAKPDGETDSTNAFVSAWGRACS-STAPTTIYVPLGRFL 70
>gi|356532916|ref|XP_003535015.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 394
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 123/268 (45%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W KS P G SI F+ ND + G+ S++S+ HI + C N+ D+ I A +
Sbjct: 135 WRCRKSGSSCPAGAR-SITFSSCNDVKVRGLTSLNSQSMHIAVEQCKNILFKDVNIKAPS 193
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
SPNT+GI + S G + + I TGDDC++L GHGIS+GSLG
Sbjct: 194 TSPNTDGIDVTLSTGVTVIDATIRTGDDCIALIQGSTNVWIERVTCGPGHGISIGSLGTS 253
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
++ V +TV N F GT N+ N NPI+IDQ YC
Sbjct: 254 EDEAGVQNVTVINSIFDGTQNGVRIKSWAKPSNGYASDIVFRNLTMLNAYNPIIIDQKYC 313
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNV 221
P +K + S VK S V + +IRGTSA PC+ I + +I+ VY
Sbjct: 314 PGDKNCPQQNSGVKISKVSYEHIRGTSACPQAINFDCSKSNPCEGIKLQDIDLVY----- 368
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ +TS C N G+ IP +C+
Sbjct: 369 --DNGSSTSTCKNADGITRGEVIPKSCL 394
>gi|338930674|emb|CBM42661.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 391
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 50/220 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F N + ++GI ++S++FH+N+ C ++ + D+ ++A DSPNT+GIH+G S+G
Sbjct: 172 SLVLDFCNKAEVSGISIINSKFFHMNVFQCKDVVIKDVTVSAPGDSPNTDGIHMGDSSGV 231
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I + I GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 232 SIIDTTIGVGDDCISIGPGSTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 291
Query: 150 ------------------FTGTNIVTNNVEN-----PIVIDQLYCPYNKCNIKVPSQVKT 186
T +NI NV+ PI+ID YCP C+ S+V
Sbjct: 292 KKSSNGLRIKAYEDAKSVLTCSNIHYENVKMEDAGYPIIIDMKYCPNKICSASAGSKVTV 351
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVY 216
+V F +I GTS ++ PC I + N+ Y
Sbjct: 352 KDVTFKDITGTSSTPEAVSLLCSDSTPCSGITMNNVKVEY 391
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA DG D +KA E AW AC G K +L+P G YL+ NF
Sbjct: 52 FDITKLGASGDGKTDSTKALEEAWASACGGKG-KQTILIPKGDYLTGALNF 101
>gi|338930672|emb|CBM42660.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 395
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 50/220 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F N + ++GI ++S++FH+N+ C ++ + D+ ++A DSPNT+GIH+G S+G
Sbjct: 176 SLVLDFCNKAEVSGISIINSKFFHMNVFQCKDVVIKDVTVSAPGDSPNTDGIHMGDSSGV 235
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I + I GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 236 SIIDTTIGVGDDCISIGPGSTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 295
Query: 150 ------------------FTGTNIVTNNVEN-----PIVIDQLYCPYNKCNIKVPSQVKT 186
T +NI NV+ PI+ID YCP C+ S+V
Sbjct: 296 KKSSNGLRIKAYEDAKSVLTCSNIHYENVKMEDAGYPIIIDMKYCPNKICSASAGSKVTV 355
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVY 216
+V F +I GTS ++ PC I + N+ Y
Sbjct: 356 KDVTFKDITGTSSTPEAVSLLCSDSTPCSGITMNNVKVEY 395
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA DG D +KA E AW AC G K +L+P G YL+ NF
Sbjct: 56 FDITKLGASGDGKTDSTKALEEAWASACGGKG-KQTILIPKGDYLTGALNF 105
>gi|350539801|ref|NP_001234533.1| abscission polygalacturonase precursor [Solanum lycopersicum]
gi|1575705|gb|AAB09575.1| abscission polygalacturonase [Solanum lycopersicum]
gi|2459813|gb|AAC28904.1| polygalacturonase 2 [Solanum lycopersicum]
Length = 392
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 126/257 (49%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ ++G+ +S+ F I + GC N+KL +K++A +SPNT+GIH+
Sbjct: 140 PDGTTALTFYNSNNIIMSGVTVQNSQKFQILVDGCRNVKLQGVKVSAPGNSPNTDGIHVK 199
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S I TGDDC+S+ GHGIS+GSLG + V +TV
Sbjct: 200 LSSGVSIINSHIGTGDDCISIGPGTSNLWIEGIACGPGHGISIGSLGWKQQELGVQNVTV 259
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ TF+GT +IV NV+NPI+IDQ YCP ++ S
Sbjct: 260 KTVTFSGTTNGVRVKTWARPSNGFVRNILFQHIVMVNVKNPIIIDQNYCPNHESCPHQGS 319
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
+K S++ + +I GTSA KI PC I + GVN+ + +T + C
Sbjct: 320 GIKISDITYQDIHGTSATKIAVKLDCSKTNPCSGITL-------EGVNLSYQNQQTEASC 372
Query: 233 SNVKPTLFGKQIPATCV 249
N + + G Q C+
Sbjct: 373 VNARGRVSGLQKTTNCL 389
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+++V+++GA +DG D SKAF AW AC S + VP GKYL NF
Sbjct: 22 IYDVQNYGAKSDGKTDSSKAFLNAWAAACA-SNTPSTINVPAGKYLIHNANF 72
>gi|397530421|gb|AFO53698.1| fruit ripening and abscission polygalacturonase [Elaeis guineensis]
gi|448872674|gb|AGE46022.1| polygalacturonase [Elaeis guineensis]
Length = 391
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 124/257 (48%), Gaps = 62/257 (24%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F + I+G+ S++S FHI I GC + ++ ++ITA +SPNT+GIH+
Sbjct: 143 PAGARSLVFRNSKNILISGLTSINSERFHIVIDGCQVVTVHGVRITAPGNSPNTDGIHVQ 202
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS I+ + I TGDDC+S+ GHGIS+GSLG ++ V +TV
Sbjct: 203 SSTDVTITGAGIKTGDDCISIGPGTTNLWIEKVTCGPGHGISIGSLGNEYEEKGVENVTV 262
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ FTGT + + NV NPI+IDQ YCP+ K + P
Sbjct: 263 KTAVFTGTENGLRIKTWGRPSEGFVKGVVFEHAMMQNVRNPIIIDQNYCPHEK---RCPG 319
Query: 183 Q---VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETT 229
Q VK S V + +++G+SA+++ PC IG+ +I Y K
Sbjct: 320 QNSGVKISQVNYMDVQGSSASQVGINFDCSASNPCTGIGLQDIKLTYGNKPAK------- 372
Query: 230 SLCSNVKPTLFGKQIPA 246
S C +V T G +P+
Sbjct: 373 SFCEHVHGTASGSVVPS 389
>gi|338930676|emb|CBM42662.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 393
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 50/220 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F N + ++GI ++S++FH+N+ C ++ + D+ ++A DSPNT+GIH+G S+G
Sbjct: 174 SLVLDFCNKAEVSGISIINSKFFHMNVFQCKDVVIKDVTVSAPGDSPNTDGIHMGDSSGV 233
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I + I GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 234 SIIDTTIGVGDDCISIGPGSTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 293
Query: 150 ------------------FTGTNIVTNNVEN-----PIVIDQLYCPYNKCNIKVPSQVKT 186
T +NI NV+ PI+ID YCP C+ S+V
Sbjct: 294 KKSTNGLRIKAYEDAKSVLTCSNIHYENVKMEDAGYPIIIDMKYCPNKICSASAGSKVTV 353
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVY 216
+V F +I GTS ++ PC I + N+ Y
Sbjct: 354 KDVTFKDITGTSSTPEAVSLLCSDSTPCSGITMNNVKVEY 393
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA DG D +KA E AW AC G K +L+P G YL+ NF
Sbjct: 54 FDITKLGASGDGKTDSTKALEEAWASACGGKG-KQTILIPKGDYLTGALNF 103
>gi|224092836|ref|XP_002309716.1| predicted protein [Populus trichocarpa]
gi|222852619|gb|EEE90166.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 122/259 (47%), Gaps = 60/259 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ N+ ITG+ S++S+ FHI I C ++K+ ++++A DSPNT+GIH+
Sbjct: 142 PSGATSLEFSNSNNIAITGLASLNSQMFHIVINACQDVKVQGVRVSAAGDSPNTDGIHVQ 201
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT- 144
SS G I +S I TGDDCVS+ GHGIS+GSLGK + V +T
Sbjct: 202 SSTGVTILNSRIGTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDSQEAGVQNVTV 261
Query: 145 ------------------------VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKV 180
RN F + V NV+NPIVIDQ YCP K
Sbjct: 262 KTTTFTGTENGVRIKTWGRPSSGFARNILF--QHAVMTNVQNPIVIDQNYCPGEKGCPGQ 319
Query: 181 PSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTS 230
S VK S+V + +I G+SA ++ PC I + ++ YN P S
Sbjct: 320 VSGVKISDVTYQDIHGSSATELAVKFDCSKTNPCSGIKLEDVKLTYN------NQPAEAS 373
Query: 231 LCSNVKPTLFGKQIPATCV 249
CSN G P +C+
Sbjct: 374 -CSNAGGVASGVVQPTSCL 391
>gi|338930678|emb|CBM42663.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 393
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 112/220 (50%), Gaps = 50/220 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F N + ++GI ++S++FH+N+ C ++ + D+ ++A DSPNT+GIH+G S+G
Sbjct: 174 SLVLDFCNKAEVSGISIINSKFFHMNVFQCKDVVIKDVTVSAPGDSPNTDGIHMGDSSGV 233
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I + I GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 234 SIIDTTIGVGDDCISIGPGSTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 293
Query: 150 ------------------FTGTNIVTNNVEN-----PIVIDQLYCPYNKCNIKVPSQVKT 186
T +NI NV+ PI+ID YCP C+ S+V
Sbjct: 294 KKSTNGLRIKAYEDAKSVLTCSNIHYENVKMEDAGYPIIIDMKYCPNKICSASAGSKVTV 353
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVY 216
+V F +I GTS ++ PC I + N+ Y
Sbjct: 354 KDVTFKDITGTSSTPEAVSLLCSDSTPCSGITMNNVKVEY 393
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA DG D +KA E AW AC G K +L+P G YL+ NF
Sbjct: 54 FDITKLGASGDGKTDSTKALEEAWASACGGKG-KQTILIPKGDYLTGALNF 103
>gi|15218742|ref|NP_176735.1| pectin lyase-like protein [Arabidopsis thaliana]
gi|2190556|gb|AAB60920.1| F5I14.10 [Arabidopsis thaliana]
gi|91806027|gb|ABE65742.1| polygalacturonase/pectinase [Arabidopsis thaliana]
gi|332196276|gb|AEE34397.1| pectin lyase-like protein [Arabidopsis thaliana]
Length = 397
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 123/257 (47%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++RF N+ I G+ S++S+ FHI I C N+K+ D++I A +SPNT+GIHI
Sbjct: 148 PEGATTLRFMDSNNVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTDGIHIQ 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S E+ ++ I TGDDC+S+ GHGIS+GSL K I ++ V +TV
Sbjct: 208 LSTDIEVRNASIKTGDDCISIGPGTKNLMVDGITCGPGHGISIGSLAKSIEEQGVENVTV 267
Query: 146 RNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+N F T+ + NV PI+IDQ YCP + S
Sbjct: 268 KNAVFVRTDNGLRIKSWPRHSNGFVERVRFLGAIMVNVSYPILIDQNYCPGDSSCPSQES 327
Query: 183 QVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
+K ++V ++ I GTSA K+PC I + IN G E +T+ C
Sbjct: 328 GIKINDVIYSGIMGTSATEIAIKMDCSEKVPCTGIRMQAINLTSYG-----EAAKTS--C 380
Query: 233 SNVKPTLFGKQIPATCV 249
+NV G P+ C+
Sbjct: 381 TNVSGKQLGLVTPSGCL 397
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 8/54 (14%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL--VPPGKYL---SIRF 50
NV FGA +GI + +KAF AW AC G++ +V+ VP G+YL +RF
Sbjct: 31 LNVLSFGANPNGIVESAKAFSDAWDAAC---GVEDSVVIYVPKGRYLVSGEVRF 81
>gi|224117898|ref|XP_002331659.1| predicted protein [Populus trichocarpa]
gi|222874055|gb|EEF11186.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 124/257 (48%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ + ITG+ S++S+ FHI I GC N+KL +K++A +SPNT+GIH+
Sbjct: 140 PRGATSLEFSNSKNIAITGLASLNSQMFHIVINGCQNVKLQGVKVSADGNSPNTDGIHVQ 199
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGK-----GINDEEV 140
S I +S I TGDDC+S+ GHGIS+GSLGK G+ D V
Sbjct: 200 LSTAVTILNSRIGTGDDCISIGPGTSNLWIENVACGPGHGISIGSLGKDSQEAGVRDVTV 259
Query: 141 V---------GLTV----RNCTFTGTNI-----VTNNVENPIVIDQLYCPYNKCNIKVPS 182
GL + R TNI V NNV+NPI+IDQ YCP NK S
Sbjct: 260 KTTTFTGTENGLRIKTWGRPSNGFATNILFQHVVMNNVKNPILIDQNYCPGNKNCPGQAS 319
Query: 183 QVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
VK S+V + +I GTSA K PC I + ++ Y+ P S C
Sbjct: 320 GVKISDVTYQDIHGTSATELAVKFDCSRKYPCTGIKLEDVKLTYD------NKPAEAS-C 372
Query: 233 SNVKPTLFGKQIPATCV 249
SN G P +C+
Sbjct: 373 SNAGGVASGMVQPTSCL 389
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F+V +GA DG D +KAF AW +AC G + + VP G + + F
Sbjct: 24 FSVLSYGAKPDGKTDSTKAFAAAWSQACASTG-PATISVPKGSFSLRQVKF 73
>gi|356532405|ref|XP_003534763.1| PREDICTED: polygalacturonase-like, partial [Glycine max]
Length = 389
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 55/267 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WD A+ P ++RF ITG+ S +S+ HI I C+N+K++ +K+ A
Sbjct: 125 WDCKYKAMPNCPIGAATLRFTNSEHIVITGLTSENSQKVHILINACHNVKMHGVKLMADG 184
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S I I TGDDC+S+ GHGIS+GSLG
Sbjct: 185 NSPNTDGIHVQFSTDVTILAPRIQTGDDCISVGPGCRNLWIEDVACGPGHGISIGSLGWD 244
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+++ V +TVR TF+ T + N+V+NPI+IDQ YC
Sbjct: 245 LDEPGVKNVTVRKATFSKTQNGFRIKSWGRPSRGFVQDVHFEHATMNDVQNPIIIDQHYC 304
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P+ S VK S+V + +I GTSA ++ PC+ I + +I + Y +N
Sbjct: 305 PFRNGCPSQASGVKISDVSYKDIHGTSATQVAVKFDCSSEQPCERITLEDITFTYK-IN- 362
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATC 248
+ P+ +LC++ G P +C
Sbjct: 363 --KAPQ--ALCNHAGGITLGVVQPQSC 385
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV DFGA DG D + AF AW +AC+ + + VP G++L
Sbjct: 19 YNVVDFGAKPDGTTDATSAFLGAWNKACS-SPKPAGIHVPQGRFL 62
>gi|116830987|gb|ABK28449.1| unknown [Arabidopsis thaliana]
Length = 398
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 123/257 (47%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++RF N+ I G+ S++S+ FHI I C N+K+ D++I A +SPNT+GIHI
Sbjct: 148 PEGATTLRFMDSNNVKIKGVLSLNSQLFHIAINRCRNIKIEDVRIIAPDESPNTDGIHIQ 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S E+ ++ I TGDDC+S+ GHGIS+GSL K I ++ V +TV
Sbjct: 208 LSTDIEVRNASIKTGDDCISIGPGTKNLMVDGITCGPGHGISIGSLAKSIEEQGVENVTV 267
Query: 146 RNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+N F T+ + NV PI+IDQ YCP + S
Sbjct: 268 KNAVFVRTDNGLRIKSWPRHSNGFVERVRFLGAIMVNVSYPILIDQNYCPGDSSCPSQES 327
Query: 183 QVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
+K ++V ++ I GTSA K+PC I + IN G E +T+ C
Sbjct: 328 GIKINDVIYSGIMGTSATEIAIKMDCSEKVPCTGIRMQAINLTSYG-----EAAKTS--C 380
Query: 233 SNVKPTLFGKQIPATCV 249
+NV G P+ C+
Sbjct: 381 TNVSGKQLGLVTPSGCL 397
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 8/54 (14%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL--VPPGKYL---SIRF 50
NV FGA +GI + +KAF AW AC G++ +V+ VP G+YL +RF
Sbjct: 31 LNVLSFGANPNGIVESAKAFSDAWDAAC---GVEDSVVIYVPKGRYLVSGEVRF 81
>gi|449442583|ref|XP_004139061.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 393
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 136/292 (46%), Gaps = 68/292 (23%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDS 66
+G V DG T W AC GI + L +S N L I G+ SV+S
Sbjct: 120 YGGVLDG------QGTTLW--ACKNSGINTCSLGATTLEVSDSQNIL----INGLSSVNS 167
Query: 67 RYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL---- 122
+ +HI + C ++K+ +K+ A ++SPNT+GIH+ S+ I +S I+TGDDC+S+
Sbjct: 168 QMYHIVVYDCQDVKIQGVKVLAASNSPNTDGIHVERSSNVAILNSNISTGDDCISIGPGT 227
Query: 123 ------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------- 153
GHGIS+GSLGK + V +T++ F GT
Sbjct: 228 SHLWMERLACGPGHGISIGSLGKWWEEAGVKNVTLKTAHFKGTMNGVRIKSWGRPSNGSA 287
Query: 154 ------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----- 202
+IV +NV NP++IDQ YCP+N+ S VK SNV + +IRGTSA ++
Sbjct: 288 KNILFQHIVLDNVTNPLIIDQNYCPHNQGCPNQASGVKISNVTYKDIRGTSATEVGINFE 347
Query: 203 -----PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC I + ++ ++ + + C T G P+ C+
Sbjct: 348 CSPARPCNQIRLEDVKLIF-------KDQIAQAWCEYATGTTLGLVQPSNCL 392
>gi|242055243|ref|XP_002456767.1| hypothetical protein SORBIDRAFT_03g042350 [Sorghum bicolor]
gi|241928742|gb|EES01887.1| hypothetical protein SORBIDRAFT_03g042350 [Sorghum bicolor]
Length = 403
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 119/245 (48%), Gaps = 58/245 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G++SVDS FH+ +L C+ + + + + A ADSPNT+GIH+ S+ + + I+TGD
Sbjct: 164 VAGVRSVDSELFHVVVLQCHGVTVRGVTVEAPADSPNTDGIHMHMSSHVSVYDARISTGD 223
Query: 118 DCVSL----------------GHGISVGSLGK--GINDEEVVGLTVRNCTFTGT------ 153
DC+S+ GHGIS+GSLGK G+ E V +TV+ FTGT
Sbjct: 224 DCISIGPGNSHLWIERVACGPGHGISIGSLGKQQGMEVEAVQNVTVKTTWFTGTMNGLRI 283
Query: 154 -----------------NIVTNNVENPIVIDQLYCP-YNKC-NIKVPSQVKTSNVRFNNI 194
+ + V+NPI+IDQ YCP + C S ++ S+VR+ I
Sbjct: 284 KTWGGSKRGFVTGVTFADSTMSGVDNPIIIDQNYCPDSSGCPGAGRSSSIRISDVRYVGI 343
Query: 195 RGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQI 244
RG+SA + PC I + ++ Y + S C NV+ T G +
Sbjct: 344 RGSSATPVAVNFDCSRSNPCSGISLQDVALTYQNRPAAAK-----SYCRNVQGTTLGLVL 398
Query: 245 PATCV 249
P +C+
Sbjct: 399 PPSCL 403
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
V+NV +GA DG D + F AW +AC + V VPPG+YL
Sbjct: 29 VYNVLRYGARPDGATDAAGPFLRAWADACR-SPRPATVYVPPGRYL 73
>gi|119507451|dbj|BAF42033.1| polygalacturonase2 [Pyrus communis]
Length = 459
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/245 (33%), Positives = 120/245 (48%), Gaps = 62/245 (25%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ FN N+ + +K D++ H+ C+N++ + L +TA DSPNT+GIH+ ++
Sbjct: 221 AVTFNGCNNLVVKNLKIQDAQQMHVMFQNCFNVQASCLTVTAPEDSPNTDGIHVANTQNI 280
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS SVI TGDDC+S+ GHGIS+GSLGK + + V G+ V
Sbjct: 281 TISSSVIGTGDDCISIVSGSQRVQAKNITCGPGHGISIGSLGKNGSKDYVSGVLVNGAKL 340
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPY--NKCNIKVPSQVKT 186
+GT N+ NNV NPI+IDQ YC + CN + S V+
Sbjct: 341 SGTANGLRIKTWQGGSGSATNIVFQNVQMNNVTNPIMIDQNYCDHKTKDCN-QQKSAVQV 399
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
NV + NIRGTSA+ +PCQ I + NI + NG + C+NV+
Sbjct: 400 KNVLYQNIRGTSASGDAITVYCSQSVPCQGIVLQNIQ-LQNG----------RAECNNVQ 448
Query: 237 PTLFG 241
P G
Sbjct: 449 PAYKG 453
>gi|449526373|ref|XP_004170188.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Cucumis
sativus]
Length = 393
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 136/292 (46%), Gaps = 68/292 (23%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDS 66
+G V DG T W AC GI + L +S N L I G+ SV+S
Sbjct: 120 YGGVLDG------QGTTLW--ACKNSGINTCSLGATTLEVSDSQNIL----INGLSSVNS 167
Query: 67 RYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL---- 122
+ +HI + C ++K+ +K+ A ++SPNT+GIH+ S+ I +S I+TGDDC+S+
Sbjct: 168 QMYHIVVYDCQDVKIQGVKVLAASNSPNTDGIHVERSSNVAILNSNISTGDDCISIGPGT 227
Query: 123 ------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------- 153
GHGIS+GSLGK + V +T++ F GT
Sbjct: 228 SHLWMERLACGPGHGISIGSLGKWWEEAGVKNVTLKTAHFKGTMNGVRIKSWGRPSNGSA 287
Query: 154 ------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----- 202
+IV +NV NP++IDQ YCP+N+ S VK SNV + +IRGTSA ++
Sbjct: 288 KNILFQHIVLDNVTNPLIIDQNYCPHNQGCPNQASGVKISNVTYKDIRGTSATEVGINFE 347
Query: 203 -----PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC I + ++ ++ + + C T G P+ C+
Sbjct: 348 CSPARPCNQIRLEDVKLIF-------KDQIAQAWCEYATGTTLGLVQPSNCL 392
>gi|224117782|ref|XP_002331630.1| predicted protein [Populus trichocarpa]
gi|222874026|gb|EEF11157.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 126/260 (48%), Gaps = 62/260 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ N+ ITG+ S++S+ FHI I GC N+K+ +K++A SPNT+GIH+
Sbjct: 147 PRGATSLEFSNSNNIAITGLASLNSQLFHIVINGCQNVKVQGVKVSAAGSSPNTDGIHVQ 206
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV---- 141
SS G I +S I TGDDCVS+ GHGIS+GSLGK + V
Sbjct: 207 SSTGVTILNSRIGTGDDCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGVQNVTV 266
Query: 142 ----------GLTV-----------RNCTFTGTNIVTNNVENPIVIDQLYCPYNK-CNIK 179
GL + R+ F + V NNV+NPIVIDQ YCP K C +
Sbjct: 267 KTTTFTGTENGLRIKSWGRPSNGFARDILF--QHAVMNNVQNPIVIDQNYCPGEKNCPGQ 324
Query: 180 VPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETT 229
V S VK S+V + +I G+SA K PC I + ++ Y N E
Sbjct: 325 V-SGVKISDVTYQDIHGSSATEVAVKFDCSKKYPCTGIKLEDVKLTYK--NQPAE----- 376
Query: 230 SLCSNVKPTLFGKQIPATCV 249
+ CSN G P +C+
Sbjct: 377 ASCSNAGGVASGLVQPTSCL 396
>gi|125572932|gb|EAZ14447.1| hypothetical protein OsJ_04368 [Oryza sativa Japonica Group]
Length = 408
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 113/246 (45%), Gaps = 54/246 (21%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G++SV S FH+ +L + + + + A ADSPNT+GIHI S + + I TGD
Sbjct: 163 VEGVRSVSSELFHVVVLQSRGVTVRRVTVEAPADSPNTDGIHIHKSTNVAVYDAAIRTGD 222
Query: 118 DCVSL----------------GHGISVGSLGK--GINDEEVVGLTVRNCTFTGT------ 153
DCVS+ GHGIS+GSLGK G+ E V +TV+ FTGT
Sbjct: 223 DCVSVGPGNSNLWIERVACGPGHGISIGSLGKQQGMAVEAVQNVTVKTTWFTGTTNGLRI 282
Query: 154 -----------------NIVTNNVENPIVIDQLYCPYNKCNIKV---PSQVKTSNVRFNN 193
+ V NPI+IDQ YCP C S +K S V + +
Sbjct: 283 KTWGNSKRGFVRGVTFSDSTMAGVGNPIIIDQHYCPDGGCGGAARGSSSGIKISEVEYAD 342
Query: 194 IRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQ 243
+RG+SA + PC I + ++ Y G + +++ S C N + T G
Sbjct: 343 VRGSSATPVAVSFDCSRSNPCSGIRLRDVRLTYQGKSGRLQAAGAVSSCRNAQGTASGLV 402
Query: 244 IPATCV 249
+P +C+
Sbjct: 403 VPPSCL 408
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
V++V +GA DG D ++ F AW +AC + V VPPG+YL R F+
Sbjct: 28 VYSVVRYGARGDGASDSTRPFLRAWADACR-SPRPATVYVPPGRYLLGRATFVG 80
>gi|9967518|emb|CAC05657.1| endopolygalacturonase [Brassica napus]
gi|9967520|emb|CAC05658.1| endopolygalacturonase [Brassica napus]
Length = 434
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 119/240 (49%), Gaps = 53/240 (22%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ET W +C + K P ++ F + + ++ D++ I+I C N+++
Sbjct: 174 ETWWENSCKRNEAKKCTKAPT----ALTFYNSKNLRVNNLRVKDAQQIQISIEKCSNVQV 229
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+++++TA ADSPNT+GIHI ++ ++S+S+I TGDDC+S+ GHG
Sbjct: 230 SNVEVTAPADSPNTDGIHITNTQNIQVSNSIIGTGDDCISIESGSQNVQINDLTCGPGHG 289
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG + V G+TV +GT NI NVENP
Sbjct: 290 ISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTNQGGSGTASNIIFQNIQMENVENP 349
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNIN 213
I+IDQ YC +KC + S V+ NV + NI GTSA+ I PCQ I + +N
Sbjct: 350 IIIDQDYCDKSKC-TEQKSAVQIKNVVYRNISGTSASDIAITFNCSKNYPCQGIVLDKVN 408
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL---SIRFN 51
V DFGA DG DD++AF AW++AC+ G + +LVP GK S+R N
Sbjct: 70 VSDFGAKGDGKTDDTQAFVNAWKKACSSSGAVN-LLVPEGKTYFLKSLRLN 119
>gi|357114979|ref|XP_003559271.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 403
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 128/271 (47%), Gaps = 49/271 (18%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
E W+ +C + + P ++ F+ ++ T+ +K V+S+ ++++ C +++L
Sbjct: 134 ELWWKNSCKTNKARPCKQAPT----ALTFHLCSNLTVENLKIVNSQQINMSVEDCSDVQL 189
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
L ITA SPNT+GIHI S ++ VI TGDDC+S+ GHG
Sbjct: 190 ARLSITAPGTSPNTDGIHITRSKDVQVRDCVIRTGDDCMSIEDGTHNLHVTKVVCGPGHG 249
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG + EV G+ + GT NI+ +NV+NP
Sbjct: 250 ISIGSLGDDNSRAEVSGIYIDTVQLYGTTNGARIKTYQGGSGYAKDIVFQNIIMDNVQNP 309
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----ANKIPCQNIGIGNINWVYNGV 219
I+IDQ YC K S V+ SNV F NIRGT+ A K+ C N + V +
Sbjct: 310 IIIDQNYCDSAKPCKNQESAVEISNVVFKNIRGTTMSKDAIKLDCSN-SDSCTDIVLENI 368
Query: 220 NVKVEG--PETTSLCSNVKPTLFGKQIPATC 248
++K+EG ET S C N K G P C
Sbjct: 369 DLKMEGGNGETQSTCQNAKWRKSGNVTPQPC 399
>gi|226530040|ref|NP_001141204.1| uncharacterized protein LOC100273291 precursor [Zea mays]
gi|194703252|gb|ACF85710.1| unknown [Zea mays]
gi|414879284|tpg|DAA56415.1| TPA: putative alcohol dehydrogenase superfamily protein [Zea mays]
Length = 401
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 117/249 (46%), Gaps = 59/249 (23%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
D + G++SVDS FH+ +L C+ + + + + A ADSPNT+GIH+ S + + I
Sbjct: 159 KDVVVAGLRSVDSELFHVVVLQCHGVTVRGVTVEAPADSPNTDGIHLHMSTHVSVYDARI 218
Query: 114 ATGDDCVSL----------------GHGISVGSLGK--GINDEEVVGLTVRNCTFTGT-- 153
+TGDDC+S+ GHGIS+GSLGK G E V +TV+ FTGT
Sbjct: 219 STGDDCISIGPGNSHLWIERVACGPGHGISIGSLGKQQGTEVEAVQNVTVKTTWFTGTMN 278
Query: 154 ---------------------NIVTNNVENPIVIDQLYCPYNK-C-NIKVPSQVKTSNVR 190
+ + V+NPI+IDQ YCP + C S ++ S+VR
Sbjct: 279 GLRIKTWGGSKRGFVTGVTFADSTMSGVDNPIIIDQNYCPTSSGCPGAGRSSSIRISDVR 338
Query: 191 FNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLF 240
+ IRG+SA + PC I + ++ Y S C NV+ T
Sbjct: 339 YVGIRGSSATPVAVNFDCSRSYPCSGISLQDVALTYQ------NRAAAKSYCRNVQGTAL 392
Query: 241 GKQIPATCV 249
G +P +C+
Sbjct: 393 GLVLPPSCL 401
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
V+NV +GA DG+ D + F AW +AC + +AV VPPG+YL F
Sbjct: 29 VYNVLRYGARPDGVTDAAGPFLRAWADACR-SPLPAAVYVPPGRYLVRSATF 79
>gi|115441547|ref|NP_001045053.1| Os01g0891100 [Oryza sativa Japonica Group]
gi|20161258|dbj|BAB90184.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|113534584|dbj|BAF06967.1| Os01g0891100 [Oryza sativa Japonica Group]
gi|125528676|gb|EAY76790.1| hypothetical protein OsI_04747 [Oryza sativa Indica Group]
Length = 408
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 113/246 (45%), Gaps = 54/246 (21%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G++SV S FH+ +L + + + + A ADSPNT+GIHI S + + I TGD
Sbjct: 163 VEGVRSVSSELFHVVVLQSRGVTVRRVTVEAPADSPNTDGIHIHKSTNVAVYDAAIRTGD 222
Query: 118 DCVSL----------------GHGISVGSLGK--GINDEEVVGLTVRNCTFTGT------ 153
DCVS+ GHGIS+GSLGK G+ E V +TV+ FTGT
Sbjct: 223 DCVSVGPGNSNLWIERVACGPGHGISIGSLGKQQGMAVEAVQNVTVKTTWFTGTTNGLRI 282
Query: 154 -----------------NIVTNNVENPIVIDQLYCPYNKCNIKV---PSQVKTSNVRFNN 193
+ V NPI+IDQ YCP C S +K S V + +
Sbjct: 283 KTWGNSKRGFVRGVTFSDSTMAGVGNPIIIDQHYCPDGGCGGAARGSSSGIKISEVEYAD 342
Query: 194 IRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQ 243
+RG+SA + PC I + ++ Y G + +++ S C N + T G
Sbjct: 343 VRGSSATPVAVSFDCSRSNPCSGIRLRDVRLTYQGKSGRLQAAGAVSSCRNAQGTASGLV 402
Query: 244 IPATCV 249
+P +C+
Sbjct: 403 VPPSCL 408
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
V++V +GA DG D ++ F AW +AC + V VPPG+YL R F+
Sbjct: 28 VYSVVRYGARGDGASDSTRPFLRAWADACR-SPRPATVYVPPGRYLLGRATFVG 80
>gi|12313687|dbj|BAB21092.1| polygalacturonase precursor-like [Oryza sativa Japonica Group]
gi|125571226|gb|EAZ12741.1| hypothetical protein OsJ_02658 [Oryza sativa Japonica Group]
Length = 400
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 61/262 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S++ D I+G+KSV+S +H+ I GC + + D +I A SPNT+GIH+
Sbjct: 146 PDGATSMKVLNSRDVVISGVKSVNSELYHVVIDGCEGVAVQDARIVAPGSSPNTDGIHVQ 205
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+ I+ + I TGDDC+S+ GHGIS+GSLGK + V +TV
Sbjct: 206 SSSAVTITGASIQTGDDCISVGPGTSNLRVEHVSCGPGHGISIGSLGKESEEGGVENVTV 265
Query: 146 RNCTFTGT-------------------------NIVTNNVENPIVIDQLYCPYNKCNIKV 180
F GT + + +V NPI+IDQ YCP N
Sbjct: 266 SGAAFVGTENGLRIKTWGRAARSGAYVRGVVFEHALMRDVSNPIIIDQSYCP-NDGGQGC 324
Query: 181 PSQ---VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPE 227
P Q V+ S V + +I+G+SA+++ PC +G+ +I ++G G
Sbjct: 325 PHQSSDVQISGVTYTDIQGSSASQVAVKFDCSASKPCSGLGLQDIKLTFDG------GKP 378
Query: 228 TTSLCSNVKPTLFGKQIPATCV 249
+ C + T G +P +C+
Sbjct: 379 AEATCQHADGTASGVLMPPSCL 400
>gi|125526903|gb|EAY75017.1| hypothetical protein OsI_02915 [Oryza sativa Indica Group]
Length = 400
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 61/262 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S++ D I+G+KSV+S +H+ I GC + + D +I A SPNT+GIH+
Sbjct: 146 PDGATSMKVLNSRDVVISGVKSVNSELYHVVIDGCEGVAVQDARIVAPGSSPNTDGIHVQ 205
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+ I+ + I TGDDC+S+ GHGIS+GSLGK + V +TV
Sbjct: 206 SSSAVTITGASIQTGDDCISVGPGTSNLRVEHVSCGPGHGISIGSLGKESEEGGVENVTV 265
Query: 146 RNCTFTGT-------------------------NIVTNNVENPIVIDQLYCPYNKCNIKV 180
F GT + + +V NPI+IDQ YCP N
Sbjct: 266 SGAAFVGTENGLRIKTWGRAARSGAYVRGVVFEHALMRDVSNPIIIDQSYCP-NDGGQGC 324
Query: 181 PSQ---VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPE 227
P Q V+ S V + +I+G+SA+++ PC +G+ +I ++G G
Sbjct: 325 PHQSSDVQISGVTYTDIQGSSASQVAVKFDCSASKPCSGLGLQDIKLTFDG------GKP 378
Query: 228 TTSLCSNVKPTLFGKQIPATCV 249
+ C + T G +P +C+
Sbjct: 379 AEATCQHADGTASGVLMPPSCL 400
>gi|215736963|dbj|BAG95892.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 418
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 61/262 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S++ D I+G+KSV+S +H+ I GC + + D +I A SPNT+GIH+
Sbjct: 164 PDGATSMKVLNSRDVVISGVKSVNSELYHVVIDGCEGVAVQDARIVAPGSSPNTDGIHVQ 223
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+ I+ + I TGDDC+S+ GHGIS+GSLGK + V +TV
Sbjct: 224 SSSAVTITGASIQTGDDCISVGPGTSNLRVEHVSCGPGHGISIGSLGKESEEGGVENVTV 283
Query: 146 RNCTFTGT-------------------------NIVTNNVENPIVIDQLYCPYNKCNIKV 180
F GT + + +V NPI+IDQ YCP N
Sbjct: 284 SGAAFVGTENGLRIKTWGRAARSGAYVRGVVFEHALMRDVSNPIIIDQSYCP-NDGGQGC 342
Query: 181 PSQ---VKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPE 227
P Q V+ S V + +I+G+SA+++ PC +G+ +I ++G G
Sbjct: 343 PHQSSDVQISGVTYTDIQGSSASQVAVKFDCSASKPCSGLGLQDIKLTFDG------GKP 396
Query: 228 TTSLCSNVKPTLFGKQIPATCV 249
+ C + T G +P +C+
Sbjct: 397 AEATCQHADGTASGVLMPPSCL 418
>gi|449449647|ref|XP_004142576.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
gi|449473210|ref|XP_004153818.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 389
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/268 (34%), Positives = 133/268 (49%), Gaps = 59/268 (22%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W SA PPG SI FN+ N+ ++G+ S++S+ H+ I C N+ + ++KI A
Sbjct: 130 WACKNSAKNCPPGAR-SITFNWANNIILSGLTSINSQQTHVVINSCNNVVVKNVKIMAPD 188
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
SPNT+GIH+ SS I+ S I TGDDC+S+ GHG+S+GSLGK
Sbjct: 189 QSPNTDGIHVQSSTNVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGSLGKE 248
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
N+ V +T+ N FT + NIV NV+NPI+IDQ YC
Sbjct: 249 ANENGVENVTLINAVFTKSDNGVRIKTWPTPSNGFVRHVIFQNIVMINVKNPILIDQNYC 308
Query: 172 P-YNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVN 220
P + C+++ S VK ++V + +I GTSA PC +I + +I Y
Sbjct: 309 PNHQSCSLQ-SSGVKINDVTYKSIEGTSATSEAVTFDCSSSSPCSDIKLEDIKLTY---- 363
Query: 221 VKVEGPETTSLCSNVKPTLFGKQIPATC 248
+ TTS C N+ + G +P TC
Sbjct: 364 ---KNKTTTSSCKNIGGSSIGLVVPETC 388
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+NV FGA DG D +++F AW AC+ +S + VP G++L F
Sbjct: 26 YNVISFGAKPDGKTDSTQSFLKAWTSACS-SSTRSTINVPKGRFLLTPITF 75
>gi|356519796|ref|XP_003528555.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 398
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 114/235 (48%), Gaps = 49/235 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WD S P ++ F N+ I G+ S++S+ FHI GC N+KL +K+ A
Sbjct: 138 WDCKNSGKGNCPSGATTLAFTNSNNIAIGGLTSMNSQLFHIVFNGCQNVKLQGVKVLADG 197
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIHI S+ I +S I TGDDC+S+ GHGIS+GSLGK
Sbjct: 198 NSPNTDGIHIQMSSHVAIINSKIRTGDDCISIGPGTTNLWIENIACGPGHGISIGSLGKD 257
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ + V +TV+ TFTGT + + NVENP++IDQ YC
Sbjct: 258 LKEAGVQNVTVKTVTFTGTQNGVRIKTWGRPSNGFVRNVLFQDAIMENVENPVIIDQNYC 317
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVY 216
NK ++ S+V + +I GTSA +K PC I + ++ Y
Sbjct: 318 SDNKGCPGQVCKLYQSDVTYQDIHGTSATHVAVKFDCSSKYPCSGIKLEDVKLTY 372
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFN 51
+NV +FGA +DG D +KAF AW +AC +++ VP GK+L S FN
Sbjct: 33 YNVVNFGAKSDGKTDSTKAFLNAWAKACASTN-PASIYVPQGKFLLKSATFN 83
>gi|224117722|ref|XP_002331615.1| predicted protein [Populus trichocarpa]
gi|222874011|gb|EEF11142.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 128/260 (49%), Gaps = 62/260 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ N+ ITG+ S++S+ FHI I GC N+K+ ++++A +SPNT+GIH+
Sbjct: 147 PRGATSLDFSNSNNIAITGLASLNSQLFHIVIHGCQNVKVQGVRVSAAGNSPNTDGIHVQ 206
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV---- 141
SS G I +S I TGDDCVS+ GHGIS+GSLGK + V
Sbjct: 207 SSTGVTILNSRIGTGDDCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGVQNVTV 266
Query: 142 ----------GLTV-----------RNCTFTGTNIVTNNVENPIVIDQLYCPYNK-CNIK 179
GL + R+ F + V NNV+NPIVIDQ YCP K C +
Sbjct: 267 KTTTFTGTENGLRIKSWGRPSNGXARDILF--QHAVMNNVQNPIVIDQNYCPGEKNCPGQ 324
Query: 180 VPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETT 229
V S VK S+V + +I G+SA K PC I + ++ Y K + E +
Sbjct: 325 V-SGVKISDVTYQDIHGSSATEVAVKFDCSKKYPCTGIKLEDVKLTY-----KNQPAEAS 378
Query: 230 SLCSNVKPTLFGKQIPATCV 249
CSN G P +C+
Sbjct: 379 --CSNAGGVASGLVQPTSCL 396
>gi|296083402|emb|CBI23357.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 101/200 (50%), Gaps = 39/200 (19%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ I G+ SV+S+ FHI I GC N++L + I A SPNT+GIH+
Sbjct: 150 PSGATTLSFTNSNNIMIKGVLSVNSQMFHIVINGCNNVRLQGISIKAPESSPNTDGIHVQ 209
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S I S+I TGDDC+S+ GHGIS+GSL K + +E V +TV
Sbjct: 210 LSANIAIVRSIIRTGDDCISIGPGTRNLWIERVKCGPGHGISIGSLAKDMEEEGVENVTV 269
Query: 146 RNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPS 182
R FTGT + +NV+ PIVIDQ YCP ++ S
Sbjct: 270 RTAVFTGTQNGLRIKSWPRPSKGFVNGVHFRGAIMDNVQYPIVIDQNYCPGDEDCPSQES 329
Query: 183 QVKTSNVRFNNIRGTSANKI 202
VK SNV + I GTSA ++
Sbjct: 330 GVKVSNVTYKEIEGTSATEV 349
>gi|357114981|ref|XP_003559272.1| PREDICTED: polygalacturonase ADPG1-like [Brachypodium distachyon]
Length = 407
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/268 (31%), Positives = 126/268 (47%), Gaps = 49/268 (18%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C D P ++ F+ ++ T+ I+ VDS+ ++++ C +++L L
Sbjct: 141 WKNSCKIDKALPCTEAP----TALTFHMCDNLTVENIRIVDSQQINLSVEDCSDVRLARL 196
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA SPNT+GIHI S ++ +I TGDDC+S+ GHGIS+
Sbjct: 197 SITAPGTSPNTDGIHITRSKDVQVRDCLIKTGDDCMSIEDGTHNLRVSKVVCGPGHGISI 256
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + EV G+ + GT NI+ +NV+NPI+I
Sbjct: 257 GSLGDDNSRAEVSGIYIDTVQLYGTTNGARVKTYQGGSGYAKDIVFQNIIMDNVQNPIII 316
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----IPCQNIGIGNINWVYNGVNVK 222
DQ YC K V+ SNV F NIRGT+ +K + C N + + V +N+K
Sbjct: 317 DQNYCDSAKPCKNQELAVEISNVVFKNIRGTTVSKDAIQLNCSN-SVSCSDIVLENINLK 375
Query: 223 VEG--PETTSLCSNVKPTLFGKQIPATC 248
+EG ET S C N + G P C
Sbjct: 376 MEGGEGETESTCQNARWRKSGNVSPLPC 403
Score = 40.4 bits (93), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL 46
VF+V ++GA DG DD++A AW AC+ + +LVP GK YL
Sbjct: 32 VFSVDNYGARGDGKHDDTQALAKAWNAACS-SSRPAVLLVPKGKSYL 77
>gi|357448409|ref|XP_003594480.1| Polygalacturonase [Medicago truncatula]
gi|355483528|gb|AES64731.1| Polygalacturonase [Medicago truncatula]
Length = 380
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 129/250 (51%), Gaps = 57/250 (22%)
Query: 50 FNFLNDSTI-TGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEI 108
+NF +D+ I TG+ S++S+ FHI I C N+K++ +KI A +SPNT+GIH+ SS+ I
Sbjct: 138 WNFNSDNIIITGLTSLNSQMFHIVIRECRNVKVDGVKIIAPKNSPNTDGIHVQSSSDITI 197
Query: 109 SHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTG 152
I TGDDC+S+ GHGIS+GSLG +N+ V +TV++ TFT
Sbjct: 198 LKPRIRTGDDCISIGPSTRNLWIEHVECGPGHGISIGSLGWKLNEPGVKNVTVKSTTFTK 257
Query: 153 T-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T + +V+NPI+IDQ YCP K S + S+V
Sbjct: 258 TQNGFRIKSWGKPSNGFVRHVHFVHATMIDVQNPILIDQHYCPLYKGCSNEASGIMISDV 317
Query: 190 RFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
+ +I+GTSA K+ PC+ I + ++ Y K + P+ +LC++V T
Sbjct: 318 LYKDIQGTSATKVAVRFECSSKQPCRRIKLEDLKLSY-----KNQVPK--ALCNHVAGTA 370
Query: 240 FGKQIPATCV 249
G P +C+
Sbjct: 371 SGMVQPQSCL 380
>gi|400758|sp|Q02096.1|PGLR_PERAE RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|22631|emb|CAA47055.1| polygalacturonase [Persea americana]
Length = 462
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 125/267 (46%), Gaps = 58/267 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ET W +C + L ++ F + ++ + DS+ H++ C ++
Sbjct: 187 ETWWDSSCK----RKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIA 242
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
++L +TA SPNT+GIHI + + +SVI TGDDC+S+ GHG
Sbjct: 243 SNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHG 302
Query: 126 ISVGSLGKGINDEEVVGLTV------------RNCTFTG----------TNIVTNNVENP 163
IS+GSLG ++ V G+ V R T+ G NIV +NV NP
Sbjct: 303 ISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNP 362
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNIN 213
I+IDQ YC + S VK SNV + NIRGTSA+++ PCQ +GNIN
Sbjct: 363 IIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGYIVGNIN 422
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLF 240
V NG G ETT CSN+ L
Sbjct: 423 LVGNG------GKETTMSCSNIVQGLL 443
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNF 52
+V DFGA DG DD+KAFE AW++AC+ S ++VP K YL + F
Sbjct: 86 SVDDFGARGDGT-DDTKAFEKAWKDACS---SGSVLIVPENKNYLLKQITF 132
>gi|238011840|gb|ACR36955.1| unknown [Zea mays]
Length = 285
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 117/249 (46%), Gaps = 59/249 (23%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
D + G++SVDS FH+ +L C+ + + + + A ADSPNT+GIH+ S + + I
Sbjct: 43 KDVVVAGLRSVDSELFHVVVLQCHGVTVRGVTVEAPADSPNTDGIHLHMSTHVSVYDARI 102
Query: 114 ATGDDCVSL----------------GHGISVGSLGK--GINDEEVVGLTVRNCTFTGT-- 153
+TGDDC+S+ GHGIS+GSLGK G E V +TV+ FTGT
Sbjct: 103 STGDDCISIGPGNSHLWIERVACGPGHGISIGSLGKQQGTEVEAVQNVTVKTTWFTGTMN 162
Query: 154 ---------------------NIVTNNVENPIVIDQLYCPYNK-C-NIKVPSQVKTSNVR 190
+ + V+NPI+IDQ YCP + C S ++ S+VR
Sbjct: 163 GLRIKTWGGSKRGFVTGVTFADSTMSGVDNPIIIDQNYCPTSSGCPGAGRSSSIRISDVR 222
Query: 191 FNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLF 240
+ IRG+SA + PC I + ++ Y S C NV+ T
Sbjct: 223 YVGIRGSSATPVAVNFDCSRSYPCSGISLQDVALTYQ------NRAAAKSYCRNVQGTAL 276
Query: 241 GKQIPATCV 249
G +P +C+
Sbjct: 277 GLVLPPSCL 285
>gi|242079727|ref|XP_002444632.1| hypothetical protein SORBIDRAFT_07g025130 [Sorghum bicolor]
gi|241940982|gb|EES14127.1| hypothetical protein SORBIDRAFT_07g025130 [Sorghum bicolor]
Length = 421
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 116/238 (48%), Gaps = 60/238 (25%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
F+ + +ST+ G+ V+SR FH+NI + L I A A S NT+G+H+G S+ +
Sbjct: 159 FDGVTNSTLRGLAFVNSRGFHVNIRRSSRVVAEGLGIHAPAHSRNTDGVHVGLSSHIRVL 218
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
SVI TGDDCVS+ GHG+SVGSLGK +E+V GL ++NCT GT
Sbjct: 219 DSVIGTGDDCVSVGPGSVDVVVDGVICGPGHGLSVGSLGKEEGEEDVQGLIIKNCTVKGT 278
Query: 154 -----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVR 190
+I + V NPI+IDQ YCP++ C K S+V
Sbjct: 279 TNGVRIKTWPGSPPSRASNITFQDITMDGVANPIIIDQRYCPHDHC----ADANKISDVT 334
Query: 191 FNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
F I GTS++++ PC + + +G+N+ S+ SNV+ T
Sbjct: 335 FERIEGTSSSRVAVRLLCSEERPCTGVRL-------DGINLSCGDQPCRSVLSNVRET 385
>gi|357132729|ref|XP_003567981.1| PREDICTED: probable polygalacturonase At1g80170-like [Brachypodium
distachyon]
Length = 410
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 117/273 (42%), Gaps = 54/273 (19%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C + PP K ++ F ++ G+ + + FH+ C ++K N L
Sbjct: 138 WARSCKRKKTQPCNTRPPPK--AVHFEECRGVSVQGLTLQNGQQFHLTFTRCIDVKANFL 195
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
++ A ADSPNT+GIH+ S+ +I ++I+TGDDCVS+ GHGIS+
Sbjct: 196 RVIAPADSPNTDGIHLNDSSRVQIMDNLISTGDDCVSMVGNCSHVRVEDISCGPGHGISI 255
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGTN----------------------IVTNNVENPIVI 166
GSLGK + V + V C T T IV NV NPI+I
Sbjct: 256 GSLGKNRTTDRVENVRVDTCLLTNTTNGVRIKSWQGGMGSAYNLRFEGIVMKNVSNPIII 315
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVY 216
DQ YC V+ V F ++RGTSA + +PC+ + + N+N
Sbjct: 316 DQYYCDQPTPCANQTQAVEVRKVEFVDVRGTSATAQAIKMACSDAVPCRELELKNVNLTV 375
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
G T+ C G +P +C+
Sbjct: 376 EGGGAA----PATAFCYKAYGKTVGTVVPGSCL 404
>gi|357126288|ref|XP_003564820.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 412
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 116/244 (47%), Gaps = 54/244 (22%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G++SV+S FH+ +L + + L + + A DSPNT+GIH+ S+ + + I TGD
Sbjct: 171 VEGVRSVNSELFHVVVLQSHGVTLRRVAVEAPGDSPNTDGIHVHMSSHVSVYDANIRTGD 230
Query: 118 DCVSL----------------GHGISVGSLGK--GINDEEVVGLTVRNCTFTGT------ 153
DCVS+ GHGIS+GSLGK G+ E V +TV+ FTGT
Sbjct: 231 DCVSIGPGNSHLWVERVACGPGHGISIGSLGKEQGMAVEAVQNVTVKTTWFTGTTNGLRI 290
Query: 154 -----------------NIVTNNVENPIVIDQLYCP-YNKCNIKVPSQVKTSNVRFNNIR 195
+ V+NPI+IDQ YCP N C S +K S+V++ IR
Sbjct: 291 KTWGSSKRGFVSGVDFIDSTMTGVQNPIIIDQNYCPDKNGCGTHKSSSIKVSDVKYVGIR 350
Query: 196 GTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
G SA + PC+ I + ++ YN + G S C N + + G +P
Sbjct: 351 GWSATPVAVNFDCSKSNPCRGISLQDVMLTYN--QSPMVGGAAKSSCRNAQGSTLGLVVP 408
Query: 246 ATCV 249
+C+
Sbjct: 409 PSCL 412
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSA-VLVPPGKYLSIR 49
V++V +GA DG+ D + F AW +AC G+ A V VPPG +L R
Sbjct: 29 VYDVTRYGARPDGVTDSAVPFLRAWADACRSPGLGPATVHVPPGVFLLGR 78
>gi|224117904|ref|XP_002331662.1| predicted protein [Populus trichocarpa]
gi|222874058|gb|EEF11189.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 123/259 (47%), Gaps = 60/259 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ + ITG+ S++S+ FHI I GC N+KL +K++A +SPNT+GIH+
Sbjct: 140 PRGATSLEFSNSKNIAITGLASLNSQMFHIVINGCQNVKLQGVKVSADGNSPNTDGIHVQ 199
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGK-----GINDEEV 140
S I +S I TGDDC+S+ GHGIS+GSLGK G+ D V
Sbjct: 200 LSTAVTILNSRIGTGDDCISIGPGTSNLWIENVACGPGHGISIGSLGKESQEAGVRDVTV 259
Query: 141 V---------GLTVR-----------NCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKV 180
GL ++ N F ++V NNV+NPI+IDQ YCP K
Sbjct: 260 KTTTFTGTENGLRIKTWGRPSNGFATNILF--QHVVMNNVKNPILIDQNYCPGKKNCPGQ 317
Query: 181 PSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTS 230
S VK S+V + +I GTSA K PC I + ++ Y E +
Sbjct: 318 ASGVKISDVTYQDIHGTSATELAVKFDCSRKYPCTGIKLQDVKLTY-------ENKPAEA 370
Query: 231 LCSNVKPTLFGKQIPATCV 249
CSN G P +C+
Sbjct: 371 SCSNAGGVASGVVQPTSCL 389
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F+V +GA DG D +KAF AW +AC G + + VP G + + F
Sbjct: 24 FSVLSYGAKPDGKTDSTKAFAAAWSQACASTG-PATISVPKGSFSLRQVKF 73
>gi|479088|emb|CAA54448.1| polygalacturonase [Prunus persica]
Length = 458
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 119/248 (47%), Gaps = 60/248 (24%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ FN N+ + +K D++ H+ C N++ + L +TA DSPNT+GIHI ++
Sbjct: 214 AVTFNKCNNLVVKNLKIQDAQQMHVRFQNCKNVEASHLTVTAPEDSPNTDGIHITNTKNI 273
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS SVI TGDDC+S+ GHGIS+GSLG+ ++ V G+ V
Sbjct: 274 TISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGISIGSLGEDNANDHVSGVFVNGAKI 333
Query: 151 TGT-----------------NIVTNNVE-----NPIVIDQLYCPY-NKCNIKVPSQVKTS 187
+GT NIV NVE NPI+IDQ YC + NK + S V+
Sbjct: 334 SGTSNGVRIKTWQGGSGSASNIVFQNVEMNDVTNPIIIDQNYCDHKNKDCTRQRSAVQVK 393
Query: 188 NVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
NV + NIRGTSA+ +PCQ I + NI + + C+NVKP
Sbjct: 394 NVLYQNIRGTSASTDAITFNCSQSVPCQGIVLQNI-----------QLQNARAKCNNVKP 442
Query: 238 TLFGKQIP 245
G P
Sbjct: 443 AYKGAVSP 450
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+V +FGA +G DD++AFE AW+ AC+ +G + VLV P K +R
Sbjct: 91 ISVANFGAKGNG-ADDTRAFEKAWKAACSSNG--AIVLVVPQKTYLVR 135
>gi|357129594|ref|XP_003566446.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 424
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 148/375 (39%), Gaps = 136/375 (36%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYLS------------ 47
VF+V +GA+ DG DD+K AW AC+ S VL+P G KYL+
Sbjct: 48 VFDVLRYGALGDGHHDDTKGLAKAWAAACS-SSHPSIVLLPKGKKYLTKHVTFSGPCKSN 106
Query: 48 --------------------------IRFNFLNDSTITGIKSVD---SRYFH-------- 70
I F + T+TG+ ++D ++
Sbjct: 107 INFMIEGTLVAPPKRSYWIEATIRHWILFKAVRGLTVTGVGTIDGNGKLWWQNSCKVNSK 166
Query: 71 ---------INILGCYNLKLNDLK-----------------------ITAHADSPNTEGI 98
+ C NLK+N+LK ITA + SPNT+GI
Sbjct: 167 LPCRQSPTALTFYSCTNLKVNNLKLLNSQQIHMSVERCTDVRIFRLSITAPSSSPNTDGI 226
Query: 99 HIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVG 142
HI S G ++ + +I TGDDC+S+ GHGIS+GSLG ++ +V
Sbjct: 227 HIAHSKGVKVRNCMIRTGDDCLSIEDGTKNLHVKNIVCGPGHGISIGSLGDQNSEAQVAN 286
Query: 143 LTVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKV 180
+T+ GT N++ +NV NPI+IDQ YC K
Sbjct: 287 ITIDGVRLHGTTNGARIKTWQGGRGYAKNIVFQNMIMDNVWNPIIIDQNYCDSATPCKKQ 346
Query: 181 PSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTS 230
S V+ SNV F NIRGTSA++ PC I + N+ + +K G S
Sbjct: 347 KSAVEVSNVLFKNIRGTSASREAIKLSCSRAAPCHGIALHNVK-----LTLKRGGGNAKS 401
Query: 231 LCSNVKPTLFGKQIP 245
C N K G +P
Sbjct: 402 TCQNAKWKKLGTVMP 416
>gi|399764468|gb|AFP50434.1| polygalacturonase 3, partial [Medicago carstiensis]
Length = 173
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 89/167 (53%), Gaps = 40/167 (23%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
FNFL S + I S DS+ FH+N+LGC N + ITA S NT+GIHIG S ++
Sbjct: 4 FNFLKHSIVRDITSKDSKNFHVNVLGCTNFTFDGFTITAPXKSINTDGIHIGRSTDVKVL 63
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
++ IATGDDC+SL GHGISVGSLGK +E V + V+NCT + T
Sbjct: 64 NTNIATGDDCISLGQGSRQITVQNVNCGPGHGISVGSLGKNPKEEAVEHVLVKNCTISNT 123
Query: 154 ------------------------NIVTNNVENPIVIDQLYCPYNKC 176
+I+ NV NP++IDQ YCP+N+C
Sbjct: 124 DNGLRIKTWPSSPGTSPITDMHFEDIIMVNVLNPVIIDQEYCPWNQC 170
>gi|357118928|ref|XP_003561199.1| PREDICTED: polygalacturonase QRT2-like [Brachypodium distachyon]
Length = 471
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 129/274 (47%), Gaps = 64/274 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
E W+++C D L G ++ N+ T+ I+ ++S+ H+++ C ++ L
Sbjct: 190 EIWWKKSCRVD----KNLPCTGAPTALLLYKCNNLTVENIRLLNSQQMHMSVEDCKDVVL 245
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
++ITA DSPNT+GIHI + ++ I TGDDC+S+ GHG
Sbjct: 246 KRVRITAPGDSPNTDGIHIARTKDIQVIDCDIGTGDDCMSIETGTENLYASGVTCGPGHG 305
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG ++ V +T+ TGT ++V +V+NP
Sbjct: 306 ISIGSLGDDNSEARVSNITIYKARLTGTTNGARIKSWQGGRGYARDITYEDMVMEDVKNP 365
Query: 164 IVIDQLYCPY------NKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNI 207
I++DQ YC C K S V+ S +RF NIRGTSA K +PC +I
Sbjct: 366 IILDQNYCTMADPLRPKPCE-KQDSAVEFSGIRFKNIRGTSATKQAIKLDCSDAVPCHDI 424
Query: 208 GIGNINWVYNGVNVKVEGPE-----TTSLCSNVK 236
+ ++ +NG + G TTSLC+NV+
Sbjct: 425 LLQDVKLTFNGRPQRHRGRSAHRSTTTSLCNNVQ 458
>gi|242037695|ref|XP_002466242.1| hypothetical protein SORBIDRAFT_01g004220 [Sorghum bicolor]
gi|241920096|gb|EER93240.1| hypothetical protein SORBIDRAFT_01g004220 [Sorghum bicolor]
Length = 452
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 128/277 (46%), Gaps = 58/277 (20%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ET W+ +C + P ++ F+F + + V+S+ H++I C ++L
Sbjct: 180 ETWWKNSCKINKALPCKEAP----TALSFHFCTSLRVQDLNVVNSQQIHMSIEDCTGVQL 235
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
L ITA SPNT+GIHI SN ++++ I TGDDC+S+ GHG
Sbjct: 236 TGLSITAPGTSPNTDGIHITRSNDVQVTNCKIKTGDDCLSIESGTHNLHVSQVVCGPGHG 295
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG + EV G+T+ + GT N+V +V NP
Sbjct: 296 ISIGSLGDDNSRAEVSGITIDSVQLYGTTNGARIKTYQGGSGYAKDITFQNMVMYDVANP 355
Query: 164 IVIDQLYC--PYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
I+IDQ YC C ++ S V+ SNV F NI+GT+ K +PC I + N
Sbjct: 356 IIIDQNYCDKATAPCELQ-GSAVEVSNVVFKNIKGTTVTKDAIMLNCSRNVPCLGITLQN 414
Query: 212 INWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
IN G N K + E+T C N + G +P C
Sbjct: 415 INLRMQGSNGK-DAAEST--CQNARWRKSGTVLPQPC 448
>gi|158264069|gb|ABW24665.1| pollen-specific polygalacturonase [Brassica rapa subsp. campestris]
Length = 421
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 137/276 (49%), Gaps = 65/276 (23%)
Query: 22 ETAWR-EACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 80
E W+ + C G K +PP S++F + + I+GI SV+++ FH+ ++ N+
Sbjct: 151 EAVWKADGC---GKKLNCNLPP---TSLKFRNILNLDISGISSVNAKAFHMFLVKTTNVN 204
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
+ ++KI A A+SPNT+GIH+ ++ I+ S+IATGDDC+S+ GH
Sbjct: 205 VQNIKIIAPAESPNTDGIHLSNAVNVHIADSLIATGDDCISVGRGSTNVTVERVTCGPGH 264
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVE 161
G+SVGSLGK N+E V G+ RNCT T +I+ NV+
Sbjct: 265 GLSVGSLGKYPNEENVAGIHFRNCTMKDTDNGLRIKSWGGSSPSTAVDITYEDIMMTNVK 324
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
NPI+IDQ Y S+V SNV F N+RGT+ K +PC+ + + +
Sbjct: 325 NPIIIDQNYGSRGG-----DSKVAISNVLFKNVRGTTITKDEVQFMCSKSVPCKGVSVVD 379
Query: 212 INWVY---NGVNVKVEGPETTSLCSNVKPTLFGKQI 244
+ + G + G +LC+N +FG ++
Sbjct: 380 VELNFVGDKGGHPSSSGGLVGALCTNAN-VIFGGKL 414
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
VF++ GAV +G D SKAF W + C + + +LVP G +L+
Sbjct: 51 VFDITKNGAVGNGATDSSKAFLNTWLQVCA-SPVPATLLVPKGDFLA 96
>gi|449479814|ref|XP_004155715.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 389
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 130/258 (50%), Gaps = 59/258 (22%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
PPG SI FN+ N+ ++G+ S++S+ H+ I C N+ + ++KI A SPNT+GIH+
Sbjct: 140 PPGAR-SITFNWANNIILSGLTSINSQQTHVVINSCNNVVVKNVKIMAPDQSPNTDGIHV 198
Query: 101 GSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT 144
SS I+ S I TGDDC+S+ GHG+S+GSLGK N+ V +T
Sbjct: 199 QSSTNVTITGSTIKTGDDCISIGDGTKNLFMSDIKCGPGHGVSIGSLGKEANENGVENVT 258
Query: 145 VRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCP-YNKCNIKV 180
+ N FT + NIV NV+NPI+IDQ YCP + C+++
Sbjct: 259 LINAVFTKSDNGVRIKTWPTPSNGFVRHVIFQNIVMINVKNPILIDQNYCPNHQSCSLQ- 317
Query: 181 PSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTS 230
S VK ++V + +I GTSA PC +I + +I Y + TTS
Sbjct: 318 SSGVKINDVTYKSIEGTSATSEAVTFDCSSSSPCSDIKLEDIKLTY-------KNKTTTS 370
Query: 231 LCSNVKPTLFGKQIPATC 248
C N+ + G +P TC
Sbjct: 371 SCKNIGGSSIGLVVPETC 388
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+NV FGA DG D +++F AW AC+ +S + VP G++L F
Sbjct: 26 YNVISFGAKPDGKTDSTQSFLKAWTSACS-SSTRSTINVPKGRFLLTPITF 75
>gi|224095385|ref|XP_002310385.1| predicted protein [Populus trichocarpa]
gi|222853288|gb|EEE90835.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 121/259 (46%), Gaps = 60/259 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ N+ ITG+ S++S+ FHI I C N+K+ ++++A DSPNT+GIH+
Sbjct: 148 PSGATSLEFSNSNNIAITGLASLNSQMFHIVINACQNVKVQGVRVSAAGDSPNTDGIHVQ 207
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT- 144
SS G I +S I TGDDCVS+ GHGIS+GSLGK + V +T
Sbjct: 208 SSTGVTILNSRIGTGDDCVSIGPGTSNLWIENVACGPGHGISIGSLGKDSQEAGVQNVTV 267
Query: 145 ------------------------VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKV 180
RN F + V NV NPIVIDQ YCP +
Sbjct: 268 KTTTFTGTENGVRIKTWGRPSNGFARNILF--QHAVMTNVHNPIVIDQNYCPGEENCPGQ 325
Query: 181 PSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTS 230
S VK S+V + +I G+SA +I PC I + ++ Y + + +
Sbjct: 326 FSGVKISDVTYQDIHGSSATEIAVKFDCSKKYPCAGIKLEDVKLTY-------KNQQAEA 378
Query: 231 LCSNVKPTLFGKQIPATCV 249
CSN G P +C+
Sbjct: 379 SCSNAGGVASGLVQPTSCL 397
>gi|224117770|ref|XP_002331627.1| predicted protein [Populus trichocarpa]
gi|222874023|gb|EEF11154.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 125/260 (48%), Gaps = 62/260 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ N+ ITG+ S++S+ FHI I GC +K+ +K++A SPNT+GIH+
Sbjct: 147 PRGATSLEFSNSNNIAITGLASLNSQLFHIVINGCQKVKVQGVKVSAAGSSPNTDGIHVQ 206
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV---- 141
SS G I +S I TGDDCVS+ GHGIS+GSLGK + V
Sbjct: 207 SSTGVTILNSRIGTGDDCVSIGPGTSSLWIENVACGPGHGISIGSLGKESQEAGVQNVTV 266
Query: 142 ----------GLTV-----------RNCTFTGTNIVTNNVENPIVIDQLYCPYNK-CNIK 179
GL + R+ F + V NNV+NPIVIDQ YCP K C +
Sbjct: 267 KTTTFTGTENGLRIKSWGRPSNGFARDILF--QHAVMNNVQNPIVIDQNYCPGEKNCPGQ 324
Query: 180 VPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETT 229
V S VK S+V + +I G+SA K PC I + ++ Y N E
Sbjct: 325 V-SGVKISDVTYQDIHGSSATEVAVKFDCSKKYPCTGIKLEDVKLTYK--NQPAE----- 376
Query: 230 SLCSNVKPTLFGKQIPATCV 249
+ CSN G P +C+
Sbjct: 377 ASCSNAGGVASGLVQPTSCL 396
>gi|195620576|gb|ACG32118.1| exopolygalacturonase precursor [Zea mays]
Length = 415
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 121/253 (47%), Gaps = 57/253 (22%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ F+ +N +T+ GIK ++S++FHINI ++ + D+ +TA AD NT+G+H+G S+
Sbjct: 168 VLFHVIN-ATVAGIKLLNSKFFHINIDNSESITVKDVNVTAPADVENTDGVHVGGSSKIS 226
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT-- 149
I +S I TGDDCVS+ G GISVG LG+ ++++V +TVRN
Sbjct: 227 ILNSTIGTGDDCVSIGPGCNGVLVDSITCGPGQGISVGCLGRYKDEKDVSDITVRNLLKN 286
Query: 150 ---------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKV--PSQVKT 186
T NI V NPIVIDQ +CP C K S V
Sbjct: 287 TTNGVRIKSYVDAESVLTASHLTFENIRMEEVANPIVIDQYFCPQKVCPGKRSNSSHVSV 346
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS + PC + + ++N Y G N K T ++CSN K
Sbjct: 347 KDVTFRNITGTSSTPEAISLLCSETQPCSGVSLIDVNVEYAGKNNK-----TMAVCSNAK 401
Query: 237 PTLFGKQIPATCV 249
T G C+
Sbjct: 402 GTAKGSIEALACL 414
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +DG D +KA + AW AC G + V++P G YL NF
Sbjct: 48 FDISKLGATSDGKTDCTKAVQDAWTSACEATG-SATVVIPKGDYLVGPLNF 97
>gi|3320458|gb|AAC26510.1| polygalacturonase precursor [Cucumis melo]
Length = 393
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 134/292 (45%), Gaps = 68/292 (23%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDS 66
+G + DG T W AC GI + L +S N L I G+ SV+S
Sbjct: 120 YGGILDG------QGTTLW--ACKNSGINTCSLGATTLEVSDSQNIL----INGLSSVNS 167
Query: 67 RYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL---- 122
+ +HI + C ++K+ +K+ A ++SPNT+GIH+ S+ I +S I TGDDC+S+
Sbjct: 168 QMYHIVVYDCQDVKIQGVKVLAASNSPNTDGIHVERSSNVTILNSNIRTGDDCISIGPGT 227
Query: 123 ------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------- 153
GHGIS+GSLGK + V +T++ F GT
Sbjct: 228 SHLWMERLACGPGHGISIGSLGKWWEEAGVENVTLKTAHFKGTMNGVRIKSWGRPSNGFA 287
Query: 154 ------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----- 202
+IV +NV NP++IDQ YCP+N+ S VK SNVR+ +I GTSA ++
Sbjct: 288 KNILFKHIVFDNVNNPLIIDQNYCPHNQGCPGQASGVKISNVRYEDIHGTSATEVGINFE 347
Query: 203 -----PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC I + ++ ++ + C T G P+ C+
Sbjct: 348 CSPARPCNEIRLKDVKLIFKDQIAQAS-------CEYATGTTLGLVQPSNCL 392
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFL 53
F++ + GA DG D S A ++AW AC+ + S V VP G++ NF+
Sbjct: 27 FDIVNLGAKPDGKTDASHALQSAWARACS-STVASTVYVPKGRFYVQSGNFI 77
>gi|356558039|ref|XP_003547316.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 408
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 55/267 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WD A P ++ F ITG+ S++S+ HI I C+N+K++ +K+ A
Sbjct: 147 WDCKYKATPNCPIGAATLGFTNSEHIVITGLTSLNSQLVHILINACHNVKMHGVKLMADG 206
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GIH+ S I I TGDDC+S+ GHGIS+GSLG
Sbjct: 207 NSPNTDGIHVKFSTDVTILAPRIRTGDDCISVGPGCRNLWVEDVACGPGHGISIGSLGWD 266
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+++ V +TVR TF+ T + ++V+NPI+IDQ YC
Sbjct: 267 LDEPGVKNVTVRKATFSKTQNGFRIKSWGRPSSGFVEDVHFEHATMSDVQNPIIIDQHYC 326
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P+ S VK S++ + +I GTSA ++ PC+ I + +I + Y +N
Sbjct: 327 PFRNGCPSQASGVKISDISYKDIHGTSATQVAVKFDCSSEQPCERITLEDIRFTYK-IN- 384
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATC 248
+ P+ +LC++ T G P +C
Sbjct: 385 --KAPQ--ALCNHAGGTTLGIVQPVSC 407
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+NV DFGA DG D + AF +AW +AC+ + + VP G++L R
Sbjct: 41 YNVVDFGAKPDGATDATAAFLSAWNKACS-SNKPAGIHVPQGRFLIAR 87
>gi|24475517|dbj|BAC22688.1| polygalacturonase [Pyrus communis]
gi|82949281|dbj|BAE53368.1| polygalacturonase-1 [Pyrus communis]
Length = 460
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 127/272 (46%), Gaps = 67/272 (24%)
Query: 25 WREACNWDGIKSAVLVPPGKYL--SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
W+ +C K P G + ++ FN N+ + +K D++ H+ C N++ +
Sbjct: 203 WKNSC-----KRKPQPPCGTHAPTAVTFNRCNNLVVKNLKIQDAQQMHVRFQNCINVQAS 257
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGI 126
L +TA DSPNT+GIH+ ++ IS SVI TGDDC+S+ GHGI
Sbjct: 258 RLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGI 317
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPI 164
S+GSLG+ + + V G+ V +GT N+ NNV NPI
Sbjct: 318 SIGSLGEDGSKDHVSGVCVNGAKLSGTSNGLRIKTWQGGSGSATNIVFQNVQMNNVTNPI 377
Query: 165 VIDQLYCPYNKCNIKVP-SQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNIN 213
+IDQ YC + + K S V+ NV + NIRGTSA+ +PC+ I + ++
Sbjct: 378 IIDQNYCDHKTKDCKQQKSAVQVKNVLYQNIRGTSASGDAITLNCSQSVPCRGIALQSVR 437
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
+ NG + C+NV+P G P
Sbjct: 438 -LQNG----------RAECNNVQPAYKGVASP 458
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+V DFGA +G DD++AF AW+ AC+ G ++VP KYL +F
Sbjct: 99 ISVDDFGAKGNG-ADDTQAFVKAWKAACSSSG-AIVLVVPQKKYLVRPIDF 147
>gi|224093210|ref|XP_002334853.1| predicted protein [Populus trichocarpa]
gi|222875228|gb|EEF12359.1| predicted protein [Populus trichocarpa]
Length = 294
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/259 (34%), Positives = 124/259 (47%), Gaps = 60/259 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ + ITG+ S++S+ FHI I GC N+KL +K++A +SPNT+GIH+
Sbjct: 45 PRGATSLEFSNSKNIAITGLASLNSQMFHIVINGCQNVKLQGVKVSADGNSPNTDGIHVQ 104
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGK-----GINDEEV 140
S I +S I TGDDC+S+ GHGIS+GSLGK G+ D V
Sbjct: 105 LSTAVTILNSRIGTGDDCISIGPGTSNLWIENVACGPGHGISIGSLGKESQEAGVRDVTV 164
Query: 141 V---------GLTVR-----------NCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKV 180
GL ++ N F ++V NNV+NPI+IDQ YCP K
Sbjct: 165 KTTTFTGTENGLRIKTWGRPSNGFATNILF--QHVVMNNVKNPILIDQNYCPGKKNCPGQ 222
Query: 181 PSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTS 230
S VK S+V + +I GTSA K PC I + ++ Y+ P S
Sbjct: 223 ASGVKISDVTYQDIHGTSATELAVKFDCSRKYPCTGIKLQDVKLTYD------NKPAEAS 276
Query: 231 LCSNVKPTLFGKQIPATCV 249
CSN G P +C+
Sbjct: 277 -CSNAGGVASGMVQPTSCL 294
>gi|4826572|emb|CAB42886.1| polygalacturonase [Phleum pratense]
Length = 394
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 127/254 (50%), Gaps = 56/254 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ +F +D+ I GI +++++FH+NI C + + D+ ITA DSPNT+GIHIG S+
Sbjct: 145 TLVLDFCDDALIEGITLLNAKFFHMNIYECKGVTVKDVTITAPGDSPNTDGIHIGDSSKV 204
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I+ + I TGDDC+S+ GHGISVGSLG+ ++++V +TV+NC
Sbjct: 205 TITDTTIGTGDDCISIGPGSTGLNITGVTCGPGHGISVGSLGRYKDEKDVTDITVKNCVL 264
Query: 150 -----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPS-QVK 185
T N+ +V PI+IDQ YCP C K S +V
Sbjct: 265 KKSTNGLRIKSYEDAKSPLTASKLTYENVKMEDVGYPIIIDQKYCPNKICTSKGDSARVT 324
Query: 186 TSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+V F NI GTS ++K PC + + ++ Y+G N K T ++C+N
Sbjct: 325 VKDVTFRNITGTSSTPEAVSLLCSDKQPCNGVTMNDVKIEYSGTNNK-----TMAVCTNA 379
Query: 236 KPTLFGKQIPATCV 249
K T G TC
Sbjct: 380 KVTAKGVSEANTCA 393
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+++ GA DG D +K E AW AC G K+ +++P G +L+ NF
Sbjct: 24 YDITKLGAKPDGKTDCTKEVEEAWASACGGTG-KNTIVIPKGDFLTGPLNF 73
>gi|225443001|ref|XP_002266960.1| PREDICTED: probable polygalacturonase At3g15720 [Vitis vinifera]
gi|297743436|emb|CBI36303.3| unnamed protein product [Vitis vinifera]
Length = 391
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 148/370 (40%), Gaps = 124/370 (33%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL---SIRF------NFL 53
NV+DFGA+ DG DDS+AF AW++AC ++ GK IRF +++
Sbjct: 21 NVRDFGAIGDGTTDDSQAFLKAWKKACGIQAGYVNFIIESGKAFLLKPIRFEGPCRASYI 80
Query: 54 NDS---TITGIKSVDSR----------YFHIN---------------------------- 72
N TIT KS+ +F IN
Sbjct: 81 NIQVLGTITAPKSIYEWGGQSVDNWLIFFRINGLIVNGKGTINGQGSIWWQQLPKNNLFH 140
Query: 73 ------ILGCYNLKLN-----------------------DLKITAHADSPNTEGIHIGSS 103
+GC NLKL+ +L I A +SPNT+GI IG S
Sbjct: 141 PLDALSFVGCNNLKLDHLNLINSPRRHVVIFNINGATISNLNIIAPKESPNTDGIDIGQS 200
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRN 147
++ + I TGDDC+++ GHGIS+GSLG ++V + VR+
Sbjct: 201 TNIQLHYCNIKTGDDCIAIGPSSFYINISNIACGPGHGISIGSLGLNGRTDKVEEVQVRD 260
Query: 148 CTFTGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
CTFTGT I N +NPI+IDQ YCP N C+ + S VK
Sbjct: 261 CTFTGTRNGVRIKTWEGGSGYARKILFEGITLNAADNPIIIDQYYCPNNMCSKQSTSGVK 320
Query: 186 TSNVRFNNIRGTSANK----IPCQNIGIGNINWVYNGVNVKVEGPE--TTSLCSNVKPTL 239
S++ F + GT+ K + C + N + N VN+K E +S C N
Sbjct: 321 LSDISFTRVIGTTTTKNAINLSCSK-SVACTNILLNHVNIKSAYSEDVVSSYCINAHGRF 379
Query: 240 FGKQIPATCV 249
P C+
Sbjct: 380 SDSVPPVDCL 389
>gi|134305344|gb|ABO71786.1| polygalacturonase [Cucumis melo]
Length = 393
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 134/292 (45%), Gaps = 68/292 (23%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDS 66
+G + DG T W AC GI + L +S N L I G+ SV+S
Sbjct: 120 YGGILDG------QGTTLW--ACKNSGINTCSLGATTLEVSDSQNIL----INGLSSVNS 167
Query: 67 RYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL---- 122
+ +HI + C ++++ +K+ A ++SPNT+GIH+ S+ I +S I TGDDC+S+
Sbjct: 168 QMYHIVVYDCQDVRIQGVKVLAASNSPNTDGIHVERSSNVTILNSNIRTGDDCISIGPGT 227
Query: 123 ------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------- 153
GHGIS+GSLGK + V +T++ F GT
Sbjct: 228 SHLWMERLACGPGHGISIGSLGKWWEEAGVENVTLKTAHFNGTMNGVRIKSWGRPSNGFA 287
Query: 154 ------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----- 202
+IV +NV NP++IDQ YCP+N+ S VK SNVR+ +I GTSA ++
Sbjct: 288 KNILFQHIVFDNVNNPLIIDQNYCPHNQGCPGQASGVKISNVRYEDIHGTSATEVGINFE 347
Query: 203 -----PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC I + ++ ++ + C T G P+ C+
Sbjct: 348 CSPARPCNEIRLKDVKLIFKDQIAQAS-------CEYATGTTLGLVQPSNCL 392
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFL 53
F++ + GA DG D S A ++AW AC+ + S V VP G++ NF+
Sbjct: 27 FDIVNLGAKPDGKTDASHALQSAWARACS-STVASTVYVPKGRFYVQSGNFI 77
>gi|359485799|ref|XP_003633336.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 275
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 106/217 (48%), Gaps = 64/217 (29%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL-------------- 46
+F+V +GA AD + S+A AW +AC+ + S V++P G Y
Sbjct: 27 IFDVTKYGAKADENINISQALLKAWGDACS-SPVSSTVMIPDGTYALGQITIXGPCKAPI 85
Query: 47 ---------------------------------SIRFNFLNDSTITGIKSVDSRYFHINI 73
++RFNF+ +S + I S S+ FHIN+
Sbjct: 86 SISLFKAEVDWITFEQIDQFTLSGGGVFYGQGKNLRFNFITNSMVKDITSRYSKRFHINL 145
Query: 74 LGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------- 122
LGC N ++ I+A +S NT+GIHIG S+G I+ S I TGDDCVS+
Sbjct: 146 LGCKNSTFYNVAISALEESLNTDGIHIGRSSGINITDSTIETGDDCVSIGADSEQINIQR 205
Query: 123 -----GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN 154
GHGISVGSLGK ++E VVG++V+NCT T T
Sbjct: 206 VTYGPGHGISVGSLGKYPHEEPVVGISVKNCTXTNTQ 242
>gi|2459815|gb|AAC28905.1| polygalacturonase 4 [Solanum lycopersicum]
Length = 387
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 115/224 (51%), Gaps = 49/224 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ ++G+ +S+ FHI + GC+N + +K+ + +SPNT+GIH+
Sbjct: 138 PKGTTALAFYNSNNIVMSGVTVQNSQMFHILVDGCHNAMIQGVKVLSPGNSPNTDGIHVQ 197
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+G I +S I TGDDC+S+ GHGIS+GSLG ++ V +TV
Sbjct: 198 SSSGVSIMNSNIGTGDDCISIGPGNSNLWIEGIACGPGHGISIGSLGWESQEQGVQNVTV 257
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ +FT T +IV +NV+NPI+IDQ YCP ++ S
Sbjct: 258 KMVSFTSTENGVRVKTWARPSNGFVRNVLFQHIVMSNVQNPIIIDQNYCPNHESCPNQGS 317
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
VK S+V + +I GTSA +I PC I + ++N Y
Sbjct: 318 GVKISDVTYEDIHGTSATEIAVKLDCSKTNPCSGITLEDVNLSY 361
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDST 57
++NV++FGA ++G D +KAF +AW AC S + VP G YL IR + N T
Sbjct: 21 IYNVQNFGAQSNGKIDSTKAFLSAWGSACA-STSASTIYVPRGNYL-IRNIYFNGQT 75
>gi|194693572|gb|ACF80870.1| unknown [Zea mays]
Length = 416
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 52/251 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + ++ G+ +++ F + C +K + L++ A ADSPNT+GIH+ ++
Sbjct: 162 AVHFEECREVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVVAPADSPNTDGIHLNDTSHV 221
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ ++I+TGDDCVS+ GHGIS+GSLGK + V + V C
Sbjct: 222 RITDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDMVEDVKVDTCLL 281
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T T NIV NV NPI+IDQ YC V+
Sbjct: 282 TNTTNGVRIKSWQGGTGFARDLRFENIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRK 341
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F IRGTSA + +PC+++ + N+N G G T+LC
Sbjct: 342 VEFAGIRGTSATPQAISIACSDAVPCRDLELANVNLTLEGGG----GGRATALCYRASGK 397
Query: 239 LFGKQIPATCV 249
G +P +C+
Sbjct: 398 SVGTVVPPSCL 408
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
+ + DFGAV DGI +D++A AW AC+ K+ + VP GK I
Sbjct: 33 LLTLDDFGAVGDGIANDTQALLDAWGAACS-SNQKAVLAVPAGKVYQI 79
>gi|414873518|tpg|DAA52075.1| TPA: hypothetical protein ZEAMMB73_445912 [Zea mays]
Length = 436
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 117/250 (46%), Gaps = 53/250 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F++ D + +K V+S+ H+++ N L L ITA SPNT+GIHI S
Sbjct: 188 ALSFHYCVDLKVEDLKIVNSQQIHMSVEDSANALLARLSITAPGTSPNTDGIHITRSKDV 247
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ I TGDDC+S+ GHGIS+GSLG + EV G+T+ +
Sbjct: 248 RVTDCKIKTGDDCMSIENGTHNLHVSKVNCGPGHGISIGSLGDDNSRAEVSGITIDSVQL 307
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
GT N+V +V+NPI+IDQ YC K + S V+ S
Sbjct: 308 HGTTNGARIKTYQGGSGYAKDITFQNMVMYDVKNPIIIDQNYCDKAKPCGEQESAVQVSG 367
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F NIRGT++ K +PCQ I + NI+ + ++ T S C N K T
Sbjct: 368 VVFKNIRGTTSTKDAIKMNCSENVPCQGITLQNID-----LKMQDGKGNTRSTCQNAKWT 422
Query: 239 LFGKQIPATC 248
FG P C
Sbjct: 423 EFGTVRPQPC 432
>gi|15224377|ref|NP_181914.1| putative polygalacturonase [Arabidopsis thaliana]
gi|75318034|sp|O22818.1|PGLR6_ARATH RecName: Full=Probable polygalacturonase At2g43860; Short=PG;
AltName: Full=Pectinase At2g43860; Flags: Precursor
gi|2281084|gb|AAB64020.1| putative polygalacturonase [Arabidopsis thaliana]
gi|67633604|gb|AAY78726.1| putative polygalacturonase/pectinase [Arabidopsis thaliana]
gi|330255242|gb|AEC10336.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 405
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 115/223 (51%), Gaps = 50/223 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ N+ I+G+ S++S+ FHI I N+ ++ +K++A +SPNT+GIH+
Sbjct: 150 PTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVE 209
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+ I++S I TGDDC+S+ GHGIS+GSLG+ ++ V +TV
Sbjct: 210 SSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTV 269
Query: 146 RNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPS 182
N F GTN I V+NPI+IDQ YC + C K S
Sbjct: 270 SNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLHKPCP-KQES 328
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWV 215
VK SNVR+ +I GTS ++ PC I + ++N V
Sbjct: 329 GVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLV 371
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
NV +GA DG KD +KAF AW AC + ++VP G++L
Sbjct: 33 LNVLSYGAKPDGSKDSTKAFLAAWDVACA-SANPTTIIVPKGRFL 76
>gi|226506034|ref|NP_001151886.1| polygalacturonase precursor [Zea mays]
gi|195650599|gb|ACG44767.1| polygalacturonase precursor [Zea mays]
Length = 416
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 113/251 (45%), Gaps = 52/251 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + ++ G+ +++ F + C +K + L++ A ADSPNT+GIH+ ++
Sbjct: 162 AVHFEECREVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVVAPADSPNTDGIHLNDTSHV 221
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ ++I+TGDDCVS+ GHGIS+GSLGK + V + V C
Sbjct: 222 RITDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDMVEDVKVDTCLL 281
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T T NIV NV NPI+IDQ YC V+
Sbjct: 282 TNTTNGVRIKSWQGGTGFARDLRFENIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRK 341
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F IRGTSA + +PC+++ + N+N G G T+LC
Sbjct: 342 VEFAGIRGTSATPQAISIACSDAVPCRDLELANVNLTLEGGG----GGRATALCYRASGK 397
Query: 239 LFGKQIPATCV 249
G +P +C+
Sbjct: 398 SAGTVVPPSCL 408
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
+ + DFGAV DGI +D++A AW AC+ K+ + VP GK I
Sbjct: 33 LLTLDDFGAVGDGIANDTQALLDAWGAACS-SNQKAVLAVPAGKVYQI 79
>gi|350535050|ref|NP_001233917.1| abscission polygalacturonase precursor [Solanum lycopersicum]
gi|1575707|gb|AAB09576.1| abscission polygalacturonase [Solanum lycopersicum]
Length = 387
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 115/224 (51%), Gaps = 49/224 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ ++G+ +S+ FHI + GC+N + +K+ + +SPNT+GIH+
Sbjct: 138 PKGTTALAFYNSNNIVMSGVTVQNSQMFHILVDGCHNAMIQGVKVLSPGNSPNTDGIHVQ 197
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+G I +S I TGDDC+S+ GHGIS+GSLG ++ V +TV
Sbjct: 198 SSSGVSIMNSNIGTGDDCISIGPGNSNLWIEGIACGPGHGISIGSLGWESQEQGVQNVTV 257
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ +FT T +IV +NV+NPI+IDQ YCP ++ S
Sbjct: 258 KMVSFTSTENGVRVKTWARPSNGFVRNVLFQHIVMSNVQNPIIIDQNYCPNHESCPNQGS 317
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
VK S+V + +I GTSA +I PC I + ++N Y
Sbjct: 318 GVKISDVTYEDIHGTSATEIAVKLDCSKTNPCSGITLEDVNLSY 361
>gi|3164119|emb|CAA11846.1| polygalacturonase [Rubus idaeus]
Length = 335
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 118/240 (49%), Gaps = 55/240 (22%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C K + P ++ F N+ + +K DS+ H++ C N++ + L
Sbjct: 77 WQNSCKNKHTKPCGTLAP---TAVTFYQCNNLVVKNLKFKDSQQMHVSFEDCTNVQASYL 133
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
+TA SPNT+GIH+ ++ IS+S+I TGDDC+S+ GHGIS+
Sbjct: 134 TVTAPETSPNTDGIHVANTQNITISNSIIGTGDDCISIVSGSQNVQASSITCGPGHGISI 193
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG+G +++ V +TV +GT NI N+V NPI+I
Sbjct: 194 GSLGEGGSEDRVSKVTVNGAKISGTMNGVRIKTWQGGSGMASNIVFQNIEMNDVTNPIII 253
Query: 167 DQLYCPYN---KCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNIN 213
DQ YC + KC + + VK NV + NIRGTSA+K IPCQ I + N+
Sbjct: 254 DQNYCDTSDKRKCKQQSKA-VKVQNVLYKNIRGTSASKYAIAFDCSKSIPCQGIVLQNVQ 312
>gi|218197199|gb|EEC79626.1| hypothetical protein OsI_20838 [Oryza sativa Indica Group]
Length = 426
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 122/297 (41%), Gaps = 58/297 (19%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
VF V D G D A W +C K V K L +F ++ G
Sbjct: 121 VFRVDDLSVSGGGTIDGMGA--EWWARSCKRKKTKPCSTVSAPKAL--QFEECRRVSVQG 176
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
I + FH+ C ++K + L++ A SPNT+GIH+ + ++I ++I+TGDDCV
Sbjct: 177 ITMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTDGIHLNDTTHAQIMDNLISTGDDCV 236
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN---------- 154
S+ GHGIS+GSLGK + + + V C T T
Sbjct: 237 SMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDRIENVRVDTCLLTNTTNGVRIKSWQG 296
Query: 155 ------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK- 201
IV NV NPI+IDQ YC V+ + F IRGTSA +
Sbjct: 297 GMGYAHNLRFEGIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRKIEFAGIRGTSATEQ 356
Query: 202 ---------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+PC+++ + N+N G G ++ C G +PA+C+
Sbjct: 357 AIKLACSDAVPCRDLELRNVNLTMVG------GGAASAFCHRASGKAAGAVVPASCL 407
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSI 48
+ + DFGAV DGI +D++AF AW AC + AVL VP GK I
Sbjct: 34 LLTLDDFGAVGDGIANDTQAFLDAWNAACA--STEPAVLAVPAGKTYQI 80
>gi|52353423|gb|AAU43991.1| unknown protein [Oryza sativa Japonica Group]
gi|215700980|dbj|BAG92404.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740740|dbj|BAG97396.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 426
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 122/297 (41%), Gaps = 58/297 (19%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
VF V D G D A W +C K V K L +F ++ G
Sbjct: 121 VFRVDDLSVSGGGTIDGMGA--EWWARSCKRKKTKPCSTVSAPKAL--QFEECRRVSVQG 176
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
I + FH+ C ++K + L++ A SPNT+GIH+ + ++I ++I+TGDDCV
Sbjct: 177 ITMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTDGIHLNDTTHAQIMDNLISTGDDCV 236
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN---------- 154
S+ GHGIS+GSLGK + + + V C T T
Sbjct: 237 SMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDRIENVRVDTCLLTNTTNGVRIKSWQG 296
Query: 155 ------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK- 201
IV NV NPI+IDQ YC V+ + F IRGTSA +
Sbjct: 297 GMGYAHNLRFEGIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRKIEFAGIRGTSATEQ 356
Query: 202 ---------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+PC+++ + N+N G G ++ C G +PA+C+
Sbjct: 357 AIKLACSDAVPCRDLELRNVNLTMVG------GGAASAFCHRASGKAAGAVVPASCL 407
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 14/99 (14%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSI----------- 48
+ + DFGAV DGI +D++AF AW AC + AVL VP GK I
Sbjct: 34 LLTLDDFGAVGDGITNDTQAFLDAWNAACA--STEPAVLAVPAGKTYQIWPVRLAGPCKK 91
Query: 49 RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
+ + TI S D Y +++DL ++
Sbjct: 92 KLKLMISGTIAAPASPDEWAGRDPTKWLYVFRVDDLSVS 130
>gi|169144941|gb|ACA49228.1| putative polygalacturonase [Olea europaea]
Length = 356
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 117/224 (52%), Gaps = 49/224 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F N+ + G+ S++S+ F+I + GC+N KL +K++A +SPNT+GIH+
Sbjct: 105 PTGATTLAFYNSNNIIMNGLFSINSQKFNILVDGCHNAKLVGIKVSAPGNSPNTDGIHVE 164
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S G +I +S I TGDDCVS+ GHGIS+GSLG + + V +TV
Sbjct: 165 KSTGVKIMNSQIGTGDDCVSIGPGTSNLWIETIACGPGHGISIGSLGWDLQEPGVQNVTV 224
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
++ TFTGT ++V NV+NPI+IDQ YCP + S
Sbjct: 225 KSATFTGTQNGARVKTWARPSNGFVKNILFQHLVMVNVQNPIIIDQNYCPDDHNCPNQVS 284
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
VK S+V + +I G+SA++ PC +I + ++ Y
Sbjct: 285 GVKISDVTYLDIHGSSASETAVKFDCSKGNPCSDITLEDVKLTY 328
>gi|225441686|ref|XP_002282759.1| PREDICTED: polygalacturonase [Vitis vinifera]
gi|297739724|emb|CBI29906.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 58/273 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
+T W +C + S P ++ F + + +K +++ H++ C ++
Sbjct: 178 KTWWENSCKVNDDLSCKDAP----TALTFYNCKNLVVKNLKIQNAQQMHVSFEKCVGVQA 233
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ L +TA DSPNT+GIH+ + +IS SV+ TGDDC+S+ GHG
Sbjct: 234 SGLTVTAPGDSPNTDGIHVTDTQNIQISSSVLGTGDDCISIVSGTQNLQATGITCGPGHG 293
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG G ++ V +TV T +GT NI +NV+NP
Sbjct: 294 ISIGSLGSGNSEAHVSDITVNGATLSGTTNGVRIKTWQGGSGSASNIKFQNIEMHNVKNP 353
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNIN 213
I+IDQ YC +K V+ NV + NI+GTS ++K PCQ + + +I+
Sbjct: 354 IIIDQKYCDQDKPCKSQSRAVQVQNVLYQNIKGTSSSNEAIQLDCSDKFPCQGVVLQDID 413
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA 246
G G T ++C+N K T G P+
Sbjct: 414 IEIGG------GRATKAVCNNAKVTEKGDVSPS 440
>gi|51507673|emb|CAH18929.1| polygalacturonase [Pyrus communis]
Length = 460
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/272 (31%), Positives = 127/272 (46%), Gaps = 67/272 (24%)
Query: 25 WREACNWDGIKSAVLVPPGKYL--SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
W+ +C K P G Y ++ FN N+ + +K D++ H+ C N++ +
Sbjct: 203 WKNSC-----KRKPQPPCGTYAPTAVTFNRCNNLVVKNLKIQDAQQMHVRFQNCINVQAS 257
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGI 126
L +TA DSPNT+GIH+ ++ IS SVI TGDDC+S+ GHGI
Sbjct: 258 RLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSERVQATDITCGPGHGI 317
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTG-----------------TNIV-----TNNVENPI 164
S+GSLG+ + + V G+ V +G TNIV N+V NPI
Sbjct: 318 SIGSLGEDGSKDHVSGVLVNGAKLSGTSNGLRIKTWQGGSGSATNIVFPECAMNDVTNPI 377
Query: 165 VIDQLYCPYNKCNIKVP-SQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNIN 213
+IDQ YC + K S V+ NV + NIRGTSA+ +PC+ I + ++
Sbjct: 378 IIDQNYCDQKTKDCKQQKSAVQVKNVLYQNIRGTSASADAITLNCSQSVPCRGIALQSV- 436
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
+ NG + C+NV+P G P
Sbjct: 437 LLQNG----------RAECNNVQPAYKGVASP 458
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
+V DFGA +G DD++AF AW+ AC+ G ++VP KYL F
Sbjct: 99 ISVDDFGAKGNG-ADDTQAFMKAWKAACSSSG-AIVLVVPQKKYLVRPIEF 147
>gi|297828103|ref|XP_002881934.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297327773|gb|EFH58193.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 405
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 116/223 (52%), Gaps = 50/223 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ N+ I G+ S++S+ FHI I N+ ++ +K++A A+SPNT+GIH+
Sbjct: 150 PTGAKSLMFSGSNNIKINGLTSINSQRFHIVIDKSNNVNIDGVKVSADANSPNTDGIHVE 209
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+ I++S I TGDDC+S+ GHGIS+GSLG+ ++ V +TV
Sbjct: 210 SSHSVHITNSRIGTGDDCISIGPGSTDVFIQTIQCGPGHGISIGSLGRAEEEQGVDNVTV 269
Query: 146 RNCTFTGT------------------NIVTNN-----VENPIVIDQLYCPYNKCNIKVPS 182
N F GT NIV + V+NPI+IDQ YC C K S
Sbjct: 270 SNVDFMGTDNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLDKPCP-KQES 328
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWV 215
VK SNVR+ +I GTS ++ PC I + ++N V
Sbjct: 329 GVKVSNVRYEDIHGTSNTEVAVLLDCSKDKPCTGIVMDDVNLV 371
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
NV +GA DG KD +KAF AW AC + ++VP G++L
Sbjct: 33 LNVLSYGAKPDGSKDSTKAFLAAWDVACA-SANPTMIIVPKGRFL 76
>gi|356498559|ref|XP_003518118.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 481
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 118/247 (47%), Gaps = 54/247 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F ND T+ + + + ++ N+K++ L +TA DSPNT+GIH+ ++
Sbjct: 238 ALTFYKCNDLTVEDLTIKNGQKMQVSFQDSENVKVSGLTVTAPGDSPNTDGIHVTNTQNI 297
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+IS SVI TGDDC+S+ GHGIS+GSLG G + + V G+TV+
Sbjct: 298 QISSSVIGTGDDCISIVSGSKDVLATDIICGPGHGISIGSLGAGGSKDFVSGITVKGAML 357
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
+GT NI +NV NPI+IDQ YC + S V+ N
Sbjct: 358 SGTTNGLRIKTWQGGSGSASNIQFQNIQMDNVTNPIIIDQNYCDQETPCEEQKSAVQIRN 417
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V + NI+GTSA N PCQ I + NI+ G G + C++V+ +
Sbjct: 418 VMYQNIKGTSASDVGVQFDCSNNFPCQGIVLQNIDLQLEG------GGGAKASCNSVELS 471
Query: 239 LFGKQIP 245
G IP
Sbjct: 472 YRGDVIP 478
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
NV D+GA DG DD++AF AW AC+ G + +LVP YL F F
Sbjct: 116 NVNDYGARGDGKTDDTQAFNDAWEVACSSGG--AVLLVPENNYLLKPFRF 163
>gi|413946311|gb|AFW78960.1| polygalacturonase [Zea mays]
Length = 490
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 52/251 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + ++ G+ +++ F + C +K + L++ A ADSPNT+GIH+ ++
Sbjct: 241 AVHFEECREVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVVAPADSPNTDGIHLNDTSHV 300
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ ++I+TGDDCVS+ GHGIS+GSLGK + V + V C
Sbjct: 301 RITDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDMVEDVKVDTCLL 360
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T T NIV NV NPI+IDQ YC V+
Sbjct: 361 TNTTNGVRIKSWQGGTGFARDLRFENIVMRNVSNPIIIDQYYCDQPTPCANQTQAVEVRR 420
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F IRGTSA + +PC+++ + N+N G T+LC
Sbjct: 421 VEFAGIRGTSATPQAISIACSDAVPCRDLELANVNLTLEGGGAG----RATALCYRASGK 476
Query: 239 LFGKQIPATCV 249
G +P +C+
Sbjct: 477 SAGTVVPPSCL 487
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSI 48
+ + DFG V DGI +D++A AW AC+ + AVL VP GK I
Sbjct: 112 LLTLDDFGGVGDGIANDTQALLDAWAAACS--STQEAVLAVPAGKVYQI 158
>gi|414873526|tpg|DAA52083.1| TPA: hypothetical protein ZEAMMB73_529440 [Zea mays]
Length = 475
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 120/255 (47%), Gaps = 60/255 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F++ + + +K ++S+ H++I C +++++ L ITA SPNT+GIHI S
Sbjct: 194 ALSFHYCTNLRVENLKMMNSQQIHMSIEDCASVQVSRLSITAPGTSPNTDGIHITRSKDV 253
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+++ I TGDDC+S+ GHGISVGSLG + EV G+T+ +
Sbjct: 254 RVTNCKIKTGDDCMSIEDGTHGLHVSGVVCGPGHGISVGSLGDDDSRAEVSGITIDSVQL 313
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP-----SQ 183
GT N+ + V NPIVIDQ YC ++ + P S
Sbjct: 314 HGTTNGARIKTYQGGSGYARDITFQNMAMHGVRNPIVIDQSYC--DRAEAEPPCREQRSA 371
Query: 184 VKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
V+ S+V F NIRGT+ + +PC+ I + NI+ G E S C
Sbjct: 372 VQISDVVFRNIRGTTVTRDAIRMSCSRDVPCRGIVLQNIDLKMQGGKGHAE-----STCQ 426
Query: 234 NVKPTLFGKQIPATC 248
N K GK +P C
Sbjct: 427 NAKWRKSGKVVPQPC 441
>gi|326497563|dbj|BAK05871.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 400
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 113/257 (43%), Gaps = 54/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ + I G+ S++S H+ + + + D ++A DSPNT+GIHI
Sbjct: 140 PAATRSLTIYRSRNVVIQGLTSLNSAGIHVTVQASTGVAILDTVVSAPGDSPNTDGIHIK 199
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+ I +VI TGDDC+S+ GHGIS+GSLG V +TV
Sbjct: 200 QSSNVTIRDAVIGTGDDCISMVEGSSDVWIQGVRCGPGHGISIGSLGDTPEQVAVRNITV 259
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
+ T GT ++V +V NPI+IDQ YCP N S
Sbjct: 260 KAVTLAGTTNGLRIKWWVKANRGLVDGVEFSDVVMRDVRNPIIIDQNYCPGNVSCPTEGS 319
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
+K SNV + NI GTSA + PC I + NI W+ G + S C
Sbjct: 320 GIKISNVSYTNIEGTSATPVAVRFDCSPSRPCTGITMRNI-WLEYGERRR----AAESFC 374
Query: 233 SNVKPTLFGKQIPATCV 249
N +G+ +P +C+
Sbjct: 375 RNAHGVTYGQVVPPSCL 391
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGI-KSAVLVPPGKYLSIRFNF 52
++V D+GAVADG D + AF AW AC +G +AV+VP G++L R F
Sbjct: 24 YSVVDYGAVADGQTDCAGAFLRAWSAACAAEGEGPAAVVVPAGEFLVSRARF 75
>gi|356555327|ref|XP_003545985.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 437
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 120/247 (48%), Gaps = 50/247 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F N+ +T ++ +++ HI C N+ ++L + A +SPNT+GIH+ +
Sbjct: 189 AVTFYQCNNLRVTNLRFKNAQQMHIRFQKCNNVTASNLIVRAPGNSPNTDGIHVTETRNI 248
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS+S+I TGDDC+S+ GHGIS+GSLG G + +V + V TF
Sbjct: 249 LISNSIIGTGDDCISIVSGSQNVRAIDVKCGPGHGISIGSLGAGDSKAQVSNVLVNRATF 308
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
TGT NI NV NPI++DQ YC +K + S VK SN
Sbjct: 309 TGTTNGVRIKTWQGGSGYAKNVKFVNITMRNVTNPIIVDQNYCDQDKPCHEKDSAVKLSN 368
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
+ + NIRGTSA++ +PC+ I + ++ + + G T + C NV+
Sbjct: 369 IVYQNIRGTSASEVAIKFDCSKTVPCKGIYLQDV--ILTPEDHGGGGSSTIATCENVRYV 426
Query: 239 LFGKQIP 245
GK P
Sbjct: 427 HRGKFFP 433
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
N+ D+GA A +DD++AFE AW EAC+ GI ++VP K ++
Sbjct: 67 NIDDYGAKASDGRDDTEAFEKAWDEACSTGGI---LVVPEEKIYHLK 110
>gi|226503533|ref|NP_001142092.1| uncharacterized protein LOC100274254 precursor [Zea mays]
gi|194707086|gb|ACF87627.1| unknown [Zea mays]
gi|413932713|gb|AFW67264.1| hypothetical protein ZEAMMB73_031497 [Zea mays]
Length = 487
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 122/283 (43%), Gaps = 65/283 (22%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ET W+ +C + P ++ F++ + +K VDS+ H++I C ++L
Sbjct: 203 ETWWKHSCKINKDLPCEEAP----TALSFHYCTSLRVHDLKIVDSQQIHVSIEDCTGVQL 258
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
L ITA SPNT+GIHI S ++++ I TGDDC+S+ GHG
Sbjct: 259 TGLSITAPGTSPNTDGIHITRSRDVQVTNCKIKTGDDCLSIEAGTHDLHVSQIVCGPGHG 318
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG + EV G+T+ GT N+ + VENP
Sbjct: 319 ISIGSLGDDNSRAEVSGITIDTVQLYGTTNGARIKTYQGGSGYARDITFQNMAMHGVENP 378
Query: 164 IVIDQLYC--------PYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQ 205
IVIDQ YC P S V+ S+V F NIRGT+ +K +PC
Sbjct: 379 IVIDQDYCDKRQATSPPCEAQGSSSSSAVEVSDVAFRNIRGTTVSKDAIKLSCSWNVPCH 438
Query: 206 NIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
I + NI+ G E S C N + G +P C
Sbjct: 439 GITLQNISLEMLGGKGTAE-----STCRNARWRTSGTVLPQPC 476
>gi|449530160|ref|XP_004172064.1| PREDICTED: polygalacturonase QRT2-like, partial [Cucumis sativus]
Length = 314
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 120/247 (48%), Gaps = 49/247 (19%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + + G++ +++ H++ C N+K +L I + +SPNT+GIH+ +
Sbjct: 64 AVTFFQCTNLRVEGLRFRNAQQMHLSFQKCNNVKALNLWIHSPGNSPNTDGIHVTGTQFI 123
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I + +I TGDDC+S+ GHGIS+GSLG G + EV + V F
Sbjct: 124 VIKNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKTEAEVSNVVVDTAKF 183
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
+GT NIV +NV NPI+IDQ YC + + V+ SN
Sbjct: 184 SGTTNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIIDQNYCDQKEPCTQQADAVEVSN 243
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V + NIRGTSA++ IPCQ I + +IN V+ G N + + + C NVK
Sbjct: 244 VVYQNIRGTSASEVAVKFNCSKSIPCQGILLQDINLVHKGKN-DDKSAQAEASCKNVKLK 302
Query: 239 LFGKQIP 245
G+ P
Sbjct: 303 NRGRVSP 309
>gi|351723133|ref|NP_001237524.1| polygalacturonase precursor [Glycine max]
gi|85376233|gb|ABC70314.1| polygalacturonase precursor [Glycine max]
Length = 440
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 108/214 (50%), Gaps = 48/214 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F N+ +T ++ D+ H+ GC+N+ +++L I A DSPNT+GIH+ +
Sbjct: 196 AVTFYQCNNLKVTNLRFKDAPQMHVVFEGCFNVIVSNLVIRAPGDSPNTDGIHVADTQNI 255
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS+S I TGDDC+S+ GHGIS+GSLG ++ EV + V T
Sbjct: 256 VISNSDIGTGDDCISIISGSQNVRATDITCGPGHGISIGSLGADNSEAEVSNVVVNRATL 315
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
TGT NI NV NPI+IDQ YC +K + S V+ SN
Sbjct: 316 TGTTNGVRIKTWQGGSGYARNIKFLNIAMQNVTNPIIIDQYYCDQSKPCQEQDSAVQLSN 375
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNI 212
V + NI+GTSA++ +PC+ I + ++
Sbjct: 376 VLYQNIKGTSASEVAIKFDCSRAVPCRQIYVQDV 409
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
+V DFGA ADG DDS+AF AW EAC+ + A+LV P
Sbjct: 73 SVDDFGAKADG-SDDSEAFGKAWNEACS----RGAILVVP 107
>gi|28411804|dbj|BAC57279.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|50509106|dbj|BAD30173.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|222636649|gb|EEE66781.1| hypothetical protein OsJ_23515 [Oryza sativa Japonica Group]
Length = 429
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 57/273 (20%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C + + P ++ F ++ + +K ++S+ H+++ C N++++ L
Sbjct: 161 WQNSCKTNAKLACTESPT----ALTFYSCSNLKVENLKLLNSQQIHMSVEDCTNVRISGL 216
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA SPNT+GIHI S +++ I TGDDC+S+ GHGIS+
Sbjct: 217 TITAPGTSPNTDGIHITRSKNVQVTGCTIKTGDDCMSIEDGTENLHVKNMVCGPGHGISI 276
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG ++ V +T+ GT N++ NV NP++I
Sbjct: 277 GSLGDHNSEAHVNNVTIGTVRLYGTTNGARIKTWQGGRGYAKYIVFQNMIMENVWNPVII 336
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVY 216
DQ YC K S V+ SNV F NIRGTSA+K +PCQ I + ++
Sbjct: 337 DQNYCDSATPCKKQTSAVQISNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLNDVK--- 393
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ VK G + S C N K G +P C
Sbjct: 394 --LTVKGGGGDAKSTCRNAKWKKSGTVVPQPCA 424
>gi|194708392|gb|ACF88280.1| unknown [Zea mays]
gi|223950129|gb|ACN29148.1| unknown [Zea mays]
gi|413946313|gb|AFW78962.1| polygalacturonase [Zea mays]
Length = 407
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 52/251 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + ++ G+ +++ F + C +K + L++ A ADSPNT+GIH+ ++
Sbjct: 158 AVHFEECREVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVVAPADSPNTDGIHLNDTSHV 217
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ ++I+TGDDCVS+ GHGIS+GSLGK + V + V C
Sbjct: 218 RITDNLISTGDDCVSMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDMVEDVKVDTCLL 277
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T T NIV NV NPI+IDQ YC V+
Sbjct: 278 TNTTNGVRIKSWQGGTGFARDLRFENIVMRNVSNPIIIDQYYCDQPTPCANQTQAVEVRR 337
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F IRGTSA + +PC+++ + N+N G T+LC
Sbjct: 338 VEFAGIRGTSATPQAISIACSDAVPCRDLELANVNLTLEGGGAG----RATALCYRASGK 393
Query: 239 LFGKQIPATCV 249
G +P +C+
Sbjct: 394 SAGTVVPPSCL 404
Score = 38.9 bits (89), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSI 48
+ + DFG V DGI +D++A AW AC+ + AVL VP GK I
Sbjct: 29 LLTLDDFGGVGDGIANDTQALLDAWAAACS--STQEAVLAVPAGKVYQI 75
>gi|449436309|ref|XP_004135935.1| PREDICTED: polygalacturonase QRT2-like [Cucumis sativus]
Length = 458
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 116/236 (49%), Gaps = 49/236 (20%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G++ +++ H++ C N+K +L I + +SPNT+GIH+ + I + +I TGD
Sbjct: 219 VEGLRFRNAQQMHLSFQKCNNVKALNLWIHSPGNSPNTDGIHVTGTQFIVIKNCLIMTGD 278
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG G + EV + V F+GT
Sbjct: 279 DCLSIVSGSKNVRAKGITCGPGHGISIGSLGAGKTEAEVSNVVVDTAKFSGTTNGVRIKT 338
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
NIV +NV NPI+IDQ YC + + V+ SNV + NIRGTSA
Sbjct: 339 WQGGKGYAQNIIFQNIVMDNVTNPIIIDQNYCDQKEPCTQQADAVEVSNVVYQNIRGTSA 398
Query: 200 NK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
++ IPCQ I + +IN V+ G N + + + C NVK G+ P
Sbjct: 399 SEVAVKFNCSKSIPCQGILLQDINLVHKGKN-DDKSAQAEASCKNVKLKNRGRVSP 453
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+FNV D+GA+ DG +DDS+AF+ W++AC+ + LVP + ++
Sbjct: 84 IFNVDDYGAMGDG-EDDSEAFKETWKDACS--STNAIFLVPCDRVYHLK 129
>gi|359482000|ref|XP_002277214.2| PREDICTED: polygalacturonase-like [Vitis vinifera]
gi|297739725|emb|CBI29907.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 126/273 (46%), Gaps = 58/273 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
+T W +C + S P ++ F + + +K +++ H++ C ++
Sbjct: 178 KTWWENSCKVNDDLSCKDAP----TALTFYNCKNLVVKNLKIQNAQQMHVSFEKCVGVQA 233
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ L +TA DSPNT+GIH+ + +IS SVI TGDDC+S+ GHG
Sbjct: 234 SGLTVTAPGDSPNTDGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHG 293
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG G ++ V +TV T +GT NI +NV+NP
Sbjct: 294 ISIGSLGSGNSEAHVSDITVNGATLSGTTNGVRIKTWPGGSGSASNIKFQNIEMHNVKNP 353
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNIN 213
I+IDQ YC +K V+ NV + NI+GTS ++K PCQ I + +I+
Sbjct: 354 IIIDQKYCDGDKPCKSQSRAVQVQNVLYQNIKGTSSSSEAIQLDCSDKFPCQGIVLQDID 413
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA 246
G G ++C+N K T G P+
Sbjct: 414 IEIGG------GKAAQAVCNNAKVTEKGDVSPS 440
>gi|218199292|gb|EEC81719.1| hypothetical protein OsI_25337 [Oryza sativa Indica Group]
Length = 429
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 125/273 (45%), Gaps = 57/273 (20%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C + + P ++ F ++ + +K ++S+ H+++ C N++++ L
Sbjct: 161 WQNSCKTNAKLACTESPT----ALTFYSCSNLKVENLKLLNSQQIHMSVEDCTNVRISGL 216
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA SPNT+GIHI S +++ I TGDDC+S+ GHGIS+
Sbjct: 217 TITAPGTSPNTDGIHITRSKNVQVTGCTIKTGDDCMSIEDGTENLHVKNMVCGPGHGISI 276
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG ++ V +T+ GT N++ NV NP++I
Sbjct: 277 GSLGDHNSEAHVNNVTIGTVRLYGTTNGARIKTWQGGRGYAKYIVFQNMIMENVWNPVII 336
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVY 216
DQ YC K S V+ SNV F NIRGTSA+K +PCQ I + ++
Sbjct: 337 DQNYCDSATPCKKQTSAVQISNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLNDVK--- 393
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ VK G + S C N K G +P C
Sbjct: 394 --LTVKGGGGDAKSTCRNAKWKKSGTVVPQPCA 424
>gi|449435888|ref|XP_004135726.1| PREDICTED: uncharacterized protein LOC101214300 [Cucumis sativus]
Length = 1858
Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats.
Identities = 68/152 (44%), Positives = 80/152 (52%), Gaps = 41/152 (26%)
Query: 75 GCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------------ 122
GC NL + I A DSPNT+GIHIG S G I S IATGDDC+SL
Sbjct: 220 GCNNLTFQGVNIIAPEDSPNTDGIHIGRSIGISILKSRIATGDDCISLGDGSKRVKITNV 279
Query: 123 ----GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN---------------IVTN----- 158
GHGIS+GSLGK N+E V + V+NCT T I TN
Sbjct: 280 TCGPGHGISIGSLGKYTNEEPVDDVVVKNCTIMNTTNGVRIKTWPSSPVAGIATNMHFSD 339
Query: 159 ----NVENPIVIDQLYCPYNKCNIKVPSQVKT 186
NV NPI+IDQ YCP+N+CN +V S+ KT
Sbjct: 340 ITMVNVSNPILIDQEYCPWNQCNREV-SKSKT 370
>gi|326528133|dbj|BAJ89118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 414
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 117/273 (42%), Gaps = 56/273 (20%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C + PP + ++ F ++ G+ + FH++ C ++K N L
Sbjct: 145 WARSCKRKNTQPCNTRPPPR--AVHFEECRGVSVQGVTLQNGPQFHLSFTRCVDVKANFL 202
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
++ A ADSPNT+GIH+ S+ +I ++I+TGDDCVS+ GHGIS+
Sbjct: 203 RVVAPADSPNTDGIHLNDSSRVQIMDNLISTGDDCVSMVGNCSDVRVRDISCGPGHGISI 262
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGTN----------------------IVTNNVENPIVI 166
GSLGK + V + V C T T IV NV NPI+I
Sbjct: 263 GSLGKNRTTDRVENVRVDTCLLTNTTNGVRIKSWQGGTGSARDLRFEGIVMKNVSNPIII 322
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVY 216
DQ YC V+ V F ++RGTSA + +PC + + N+N
Sbjct: 323 DQYYCDQPTPCANQTEAVEVRKVEFVDVRGTSATAQAIRIACSDAVPCTELELRNVNLTV 382
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
G G T+ C G +P +C+
Sbjct: 383 VG------GGAATASCYRASGKAAGVVVPWSCL 409
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREAC 29
+ + DFGAV DG+ +D++AF AW AC
Sbjct: 36 LLTLDDFGAVGDGVANDTQAFVDAWTAAC 64
>gi|449529002|ref|XP_004171490.1| PREDICTED: polygalacturonase ADPG1-like, partial [Cucumis sativus]
Length = 271
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 120/268 (44%), Gaps = 81/268 (30%)
Query: 20 AFETAWREACNWDGIKSA--VLVPPGK-YLSIRFNF------------------------ 52
AF AW+ AC K++ +LVPPGK +L F
Sbjct: 1 AFLDAWKAACKSSNSKTSPIMLVPPGKSFLLQPFTLDGYDCKSTKTNIISIVVCTRRPTS 60
Query: 53 --LNDSTITGIKSV---DSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
L DS IK++ DS H+ I + + +L I A DSPNT+GIHI S
Sbjct: 61 LILEDSEKVHIKNIAFKDSPQMHMAIENSKYVFVKNLYIEAPGDSPNTDGIHIQHSRKIS 120
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+ S I TGDDC+S+ GHGIS+GSLGK + E+V + V++ TFT
Sbjct: 121 ITSSSIRTGDDCISIGDGSYRINISKIACGPGHGISIGSLGKHGDHEKVEFIHVKDVTFT 180
Query: 152 GTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T IV+ NPI+IDQ YC + KC + S VK SNV
Sbjct: 181 DTTNGVRIKTWQGGSGYARNIIFEGIVSRGSLNPIIIDQFYCDHEKCKNQT-SAVKVSNV 239
Query: 190 RFNNIRGTSANKI----------PCQNI 207
+N + GTS +KI PC+NI
Sbjct: 240 LYNRVSGTSKSKIAVNLACSETEPCKNI 267
>gi|115456093|ref|NP_001051647.1| Os03g0808000 [Oryza sativa Japonica Group]
gi|30103016|gb|AAP21429.1| putative polygalacturonase precursor [Oryza sativa Japonica Group]
gi|41469668|gb|AAS07380.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|108711664|gb|ABF99459.1| Polygalacturonase family protein, expressed [Oryza sativa Japonica
Group]
gi|113550118|dbj|BAF13561.1| Os03g0808000 [Oryza sativa Japonica Group]
Length = 444
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 126/276 (45%), Gaps = 58/276 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
E W +C + L G ++ F+ ++ ++ G+K V+S+ H+++ C ++L
Sbjct: 174 EGWWENSCKIN----RALPCKGAPTALSFHTCDNLSVNGLKMVNSQQIHMSVEDCTGVEL 229
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
L I+A SPNT+GIHI S ++S I TGDDCVS+ GHG
Sbjct: 230 AHLSISAPGTSPNTDGIHITHSKNVQVSDCTIKTGDDCVSIEDGTHGLHVTRLVCGPGHG 289
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG + EV + + GT N+V N+V+NP
Sbjct: 290 ISIGSLGDDNSRAEVSDIFIDTVHLYGTTNGARIKTWQGGSGYAKDIVFQNMVMNSVKNP 349
Query: 164 IVIDQLYC-PYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNI 212
I+IDQ YC KC + S V+ SNV F NI GT+ +K PC +I + +I
Sbjct: 350 IIIDQNYCDSAKKCETQEGSAVEISNVVFKNIAGTTISKSAITLNCSKNYPCYDISLQDI 409
Query: 213 NWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
N + + + T S C N K G +P C
Sbjct: 410 N-----LEMVDDNGATGSTCQNAKWRKSGTVVPQPC 440
>gi|218193956|gb|EEC76383.1| hypothetical protein OsI_13998 [Oryza sativa Indica Group]
gi|222626016|gb|EEE60148.1| hypothetical protein OsJ_13044 [Oryza sativa Japonica Group]
Length = 420
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 126/276 (45%), Gaps = 58/276 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
E W +C + L G ++ F+ ++ ++ G+K V+S+ H+++ C ++L
Sbjct: 150 EGWWENSCKIN----RALPCKGAPTALSFHTCDNLSVNGLKMVNSQQIHMSVEDCTGVEL 205
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
L I+A SPNT+GIHI S ++S I TGDDCVS+ GHG
Sbjct: 206 AHLSISAPGTSPNTDGIHITHSKNVQVSDCTIKTGDDCVSIEDGTHGLHVTRLVCGPGHG 265
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG + EV + + GT N+V N+V+NP
Sbjct: 266 ISIGSLGDDNSRAEVSDIFIDTVHLYGTTNGARIKTWQGGSGYAKDIVFQNMVMNSVKNP 325
Query: 164 IVIDQLYC-PYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNI 212
I+IDQ YC KC + S V+ SNV F NI GT+ +K PC +I + +I
Sbjct: 326 IIIDQNYCDSAKKCETQEGSAVEISNVVFKNIAGTTISKSAITLNCSKNYPCYDISLQDI 385
Query: 213 NWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
N + + + T S C N K G +P C
Sbjct: 386 N-----LEMVDDNGATGSTCQNAKWRKSGTVVPQPC 416
>gi|297741981|emb|CBI33426.3| unnamed protein product [Vitis vinifera]
Length = 371
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 152/364 (41%), Gaps = 130/364 (35%)
Query: 6 DFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS------------------ 47
++GAV DG DDS+AF AW EACN ++ + VP +L
Sbjct: 2 NYGAVGDGKTDDSQAFLKAWNEACNVQQQRATLNVPARTFLLNPIEFSGPCVPTSIEFQV 61
Query: 48 ------------------IRFNFLNDSTITGIKSVDSR---------------------- 67
I F+++ T+TG ++D +
Sbjct: 62 AGKIIASTNKSLFDNNHWILFSYVKGLTLTGSGTIDGQGAGSWQDRTGVAISHVLGQALK 121
Query: 68 -----------YFHIN-------ILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
HIN + C +N + ITA D+PNT+GI I SSN ++
Sbjct: 122 FYTCPNLVLQGLTHINPQKAHIILTKCDGANINSITITAPEDAPNTDGIDIASSNHVQVQ 181
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGK-GINDEEVVG-LTVRNCTFT 151
+S I TGDDC+++ GHGIS+GSLG G D + V + VR+C FT
Sbjct: 182 NSKIGTGDDCIAISARCSFINITGVTCGPGHGISIGSLGDPGSGDFDTVSEVHVRSCNFT 241
Query: 152 GTN-----------------------IVTNNVENPIVIDQLYCPYNKC-NIKVPSQVKTS 187
GTN I+ +NV PIVIDQ YCP+N C N S V S
Sbjct: 242 GTNTTGIRIKTWQGGQGEVKKITYEDIMFDNVRYPIVIDQFYCPHNVCKNNTGTSAVAIS 301
Query: 188 NVRFNNIRGTSA-NKIPCQNIGIGNI--NWVYNGVNVKVEGPETTS---------LCSNV 235
+V + I GTS+ +++ N G + N V + V++K P T+ + SNV
Sbjct: 302 DVSYTGIIGTSSGDEVMSLNCGTESSCNNIVLDDVHLKTSDPTKTAFVRCVNFNGIASNV 361
Query: 236 KPTL 239
+P+L
Sbjct: 362 EPSL 365
>gi|21530799|emb|CAD21651.2| endo polygalacturonase [Brassica rapa subsp. rapa]
Length = 433
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 115/237 (48%), Gaps = 53/237 (22%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C D K P L +N N + ++ +++ I+I C N+ + ++
Sbjct: 178 WQNSCKIDKSKPCTKAPTALTL---YNLKN-LNVKNLRVRNAQQIQISIEKCNNVDVKNV 233
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
KITA DSPNT+GIHI ++ IS+S I TGDDC+S+ GHGIS+
Sbjct: 234 KITAPGDSPNTDGIHIVATKNIRISNSDIGTGDDCISIEDGSQNVQINDLTCGPGHGISI 293
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + V G+ V T + T NI +NV+NPI+I
Sbjct: 294 GSLGDDNSKAYVSGINVDGATLSETDNGVRIKTYQGGSGTAKNIKFQNIRMDNVKNPIII 353
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNIN 213
DQ YC +KC + S V+ +NV + NI+GTSA K PCQ I + N+N
Sbjct: 354 DQNYCDKDKCE-QQESAVQVNNVVYRNIQGTSATDVAIMFNCSVKYPCQGIVLENVN 409
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL--SIRF 50
V +FGA DG DD++AF+ AW++AC+ +G+ + L+P GK YL SIRF
Sbjct: 71 VSNFGAKGDGKTDDTQAFKKAWKKACSTNGV-TTFLIPKGKTYLLKSIRF 119
>gi|1212786|emb|CAA65072.1| polygalacturonase [Brassica napus]
gi|1403141|emb|CAA67020.1| endo-polygalacturonidase [Brassica napus]
Length = 433
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 115/237 (48%), Gaps = 53/237 (22%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C D K P L +N N + ++ +++ I+I C N+ + ++
Sbjct: 178 WQNSCKIDKSKPCTKAPTALTL---YNLKN-LNVKNLRVRNAQQIQISIEKCNNVGVKNV 233
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
KITA DSPNT+GIHI ++ IS+S I TGDDC+S+ GHGIS+
Sbjct: 234 KITAPGDSPNTDGIHIVATKNIRISNSDIGTGDDCISIEDGSQNVQINDLTCGPGHGISI 293
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + V G+ V T + T NI +NV+NPI+I
Sbjct: 294 GSLGDDNSKAYVSGIDVDGATLSETDNGVRIKTYQGGSGTAKNIKFQNIRMDNVKNPIII 353
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNIN 213
DQ YC +KC + S V+ +NV + NI+GTSA K PCQ I + N+N
Sbjct: 354 DQNYCDKDKCE-QQESAVQVNNVVYQNIKGTSATDVAIMFNCSVKYPCQGIVLENVN 409
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL--SIRF 50
V +FGA DG DD++AF+ AW++AC+ +G+ + L+P GK YL SIRF
Sbjct: 71 VSNFGAKGDGKTDDTQAFKKAWKKACSTNGV-TTFLIPKGKTYLLKSIRF 119
>gi|242088669|ref|XP_002440167.1| hypothetical protein SORBIDRAFT_09g027150 [Sorghum bicolor]
gi|241945452|gb|EES18597.1| hypothetical protein SORBIDRAFT_09g027150 [Sorghum bicolor]
Length = 408
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 113/251 (45%), Gaps = 53/251 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F ++ G+ +++ F + C +K + L++ A ADSPNT+GIH+ ++
Sbjct: 160 AVHFEECRGVSVQGVTLQNAQQFQLTFTRCSCVKASFLRVIAPADSPNTDGIHLNDTSHV 219
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+ ++I+TGDDCVS+ GHGIS+GSLGK + V + V C
Sbjct: 220 HITDNLISTGDDCVSMVGNCSDVHVKDISCGPGHGISIGSLGKNRTTDMVENVRVDTCLL 279
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T T NI+ NV NPI++DQ YC V+
Sbjct: 280 TNTTNGVRIKSWQGGMGFARDLRFENILMKNVSNPIIVDQYYCDQPTPCANQTQAVEVRK 339
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F NIRGTSA + +PC+ + + N+N + + G T+LC
Sbjct: 340 VEFANIRGTSATAQAISIACSDTVPCRELELANVN-----LTLAEGGGRATALCYRASGK 394
Query: 239 LFGKQIPATCV 249
G +P +C+
Sbjct: 395 SVGTVVPPSCL 405
>gi|356531615|ref|XP_003534372.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 441
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 48/214 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F N+ +T ++ D+ H+ GC+N+ +++L I A DSPNT+GIH+ +
Sbjct: 197 AVTFYQCNNLKVTNLRFKDAPQMHVTFEGCFNVIVSNLVIRAPGDSPNTDGIHVADTQNI 256
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS++ I TGDDC+S+ GHGIS+GSLG ++ EV + V T
Sbjct: 257 VISNTDIGTGDDCISIISGSQNVRATDITCGPGHGISIGSLGADNSEAEVSNVVVNRATL 316
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
GT NI NV NPI++DQ YC K + S V+ SN
Sbjct: 317 IGTANGVRIKTWQGGSGYARNIKFLNIAMQNVTNPIIVDQYYCDQAKPCQEQDSAVQLSN 376
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNI 212
V + NIRGTSA++ +PC+ I + ++
Sbjct: 377 VLYQNIRGTSASEVAIKFDCSRAVPCRQIYVQDV 410
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 5/40 (12%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
+V DFGA ADG +DDS+AF AW EAC+ + A+LV P
Sbjct: 74 SVDDFGAKADG-RDDSEAFGKAWNEACS----RGAILVVP 108
>gi|238014976|gb|ACR38523.1| unknown [Zea mays]
gi|413946312|gb|AFW78961.1| hypothetical protein ZEAMMB73_374088 [Zea mays]
Length = 382
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 140/357 (39%), Gaps = 114/357 (31%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSI----------- 48
+ + DFG V DGI +D++A AW AC+ + AVL VP GK I
Sbjct: 29 LLTLDDFGGVGDGIANDTQALLDAWAAACS--STQEAVLAVPAGKVYQIWPVQLSGPCKK 86
Query: 49 RFNFLNDSTITGIKSVDS-------RYFH--------------INILG------------ 75
R L I S D ++ + I+ +G
Sbjct: 87 RLKLLISGAIVAPSSPDEWAGRDPMKWLYVYGVDGLSVSGGGTIDGMGQQWWASTCKRKK 146
Query: 76 ---CYN------------LKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
CY+ + + L++ A ADSPNT+GIH+ ++ I+ ++I+TGDDCV
Sbjct: 147 TQPCYSGPRPKAVHFEECREASFLRVVAPADSPNTDGIHLNDTSHVRITDNLISTGDDCV 206
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------- 153
S+ GHGIS+GSLGK + V + V C T T
Sbjct: 207 SMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDMVEDVKVDTCLLTNTTNGVRIKSWQG 266
Query: 154 -----------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA--- 199
NIV NV NPI+IDQ YC V+ V F IRGTSA
Sbjct: 267 GTGFARDLRFENIVMRNVSNPIIIDQYYCDQPTPCANQTQAVEVRRVEFAGIRGTSATPQ 326
Query: 200 -------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ +PC+++ + N+N G T+LC G +P +C+
Sbjct: 327 AISIACSDAVPCRDLELANVNLTLEGGGAG----RATALCYRASGKSAGTVVPPSCL 379
>gi|147785372|emb|CAN64004.1| hypothetical protein VITISV_043286 [Vitis vinifera]
Length = 442
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 124/273 (45%), Gaps = 58/273 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
+T W +C + S P ++ F + + +K +++ H++ C ++
Sbjct: 178 KTWWENSCKVNDDLSCKDAP----TALTFYNCKNLVVKNLKIQNAQQMHVSFEKCVGVQA 233
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ L +TA DSPNT+GIH+ + +IS SVI TGDDC+S+ GHG
Sbjct: 234 SGLTVTAPGDSPNTDGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHG 293
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG G ++ V +TV T +GT NI +NV NP
Sbjct: 294 ISIGSLGSGNSEAHVSDITVNGATLSGTTNGVRIKTWQGGSGSASNIKFQNIEMHNVXNP 353
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNIN 213
I+IDQ YC +K V+ NV + NI+GTS +BK PCQ + +I+
Sbjct: 354 IIIDQKYCDQDKPCKSQSRAVQVQNVLYQNIKGTSSSXEAIQLDCSBKFPCQGXVLQDID 413
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA 246
G G ++C+N K T G P+
Sbjct: 414 IEXGG------GXAXKAVCNNAKVTEKGDVSPS 440
>gi|414873520|tpg|DAA52077.1| TPA: hypothetical protein ZEAMMB73_569322 [Zea mays]
Length = 441
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 147/382 (38%), Gaps = 144/382 (37%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-----KYLSIR------ 49
VF++ +GA DG DD++A E AW+ AC + VLVP G K L++R
Sbjct: 64 VFSLDRYGARGDGRNDDTRALEMAWKAACA-SPRPAVVLVPAGRRYLLKLLTLRGPCKSS 122
Query: 50 ----------------------------FNFLNDSTITGIKSVD---------------- 65
F +++ T+ G ++D
Sbjct: 123 VTLTVKGTLVASPNRADWSDSDRRHWIVFRSIDELTVNGGGAIDGNGEKWWPHSCKINKA 182
Query: 66 --------SRYFHINILGCYNLKLNDLK-----------------------ITAHADSPN 94
+ FH C LK+ DLK ITA SPN
Sbjct: 183 LPCKEAPTALSFHY----CVGLKVEDLKIMNSQQIHMSVEDSANVLLARLSITAPGTSPN 238
Query: 95 TEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDE 138
T+GIHI S ++ I TGDDC+S+ GHGIS+GSLG +
Sbjct: 239 TDGIHITRSKDVRVTDCKIKTGDDCMSIENGTHNLHVSKVTCGPGHGISIGSLGDDNSRA 298
Query: 139 EVVGLTVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKC 176
EV G+T+ + GT N+V +V+NPI+IDQ YC K
Sbjct: 299 EVSGITIDSVQLHGTTNGARIKTYQGGSGYAKDITFQNMVMYDVKNPIIIDQNYCDRAKP 358
Query: 177 NIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGP 226
+ S V+ S V F NIRGT++ K +PCQ I + NI+ + ++
Sbjct: 359 CGEQESAVQVSGVVFKNIRGTTSTKDAIKMNCSENVPCQGITLQNID-----LEMQDGKG 413
Query: 227 ETTSLCSNVKPTLFGKQIPATC 248
T S C N K FG P C
Sbjct: 414 STRSTCRNAKWREFGTVHPQPC 435
>gi|359491344|ref|XP_002267182.2| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 771
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 143/356 (40%), Gaps = 129/356 (36%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP------------PGKYLSIR 49
FNV D+GA+ +G DDS+AF AW + C LVP G+ S +
Sbjct: 26 FNVMDYGAIGNGRTDDSEAFMKAWSDVCKASA-SPTFLVPGDRRFLINPVVFEGRCRSKK 84
Query: 50 FNFLNDSTITG-------------------IKSVD--------------------SRYFH 70
F D TIT K VD R
Sbjct: 85 IKFKVDGTITAPSEPSKWKCINKQCHSWISFKHVDGLVISGSGTIDGNAEKWWKQGRVTA 144
Query: 71 INILGCYNLKLNDL-----------------------KITAHADSPNTEGIHIGSSNGSE 107
+ + N++L+DL I A DSPNT+GIH+ +
Sbjct: 145 LVVARSNNVQLHDLSFKDNPHMHVVFHHCDGVKISHISIDAPEDSPNTDGIHLKETASVI 204
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I H I TGDDC+SL GHGIS+GSLGK E V + V++ FT
Sbjct: 205 IEHCTIGTGDDCISLVDGSTHIDMRHIKCGPGHGISIGSLGKFGLSETVEYIHVKDAQFT 264
Query: 152 GT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
GT I +++ E PI+IDQ YC + +C+ K P+ V+ N+
Sbjct: 265 GTTNGVRIKTWQGGRGHARNMIFEKIRSSDSEYPIIIDQFYCDHTECHDK-PNAVEIRNI 323
Query: 190 RFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+ +++GTS ++ +PC++I I NIN +Y+ G + ++ C NV
Sbjct: 324 SYIDVKGTSKKETAVKIACSDTVPCRDIFIQNINLIYDQ-----SGKQASAYCKNV 374
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 56/241 (23%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
N +TG+ ++ + H+ C + ++++ I A DSPNT+GIH+ S I I
Sbjct: 530 NKVQLTGLSFRNNPHMHVVFDSCDMVHISNVSIDAPGDSPNTDGIHLKESTHVNIEFCSI 589
Query: 114 ATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---- 153
TGDDC+S+ GHGIS+GS+G+ E V + V + F G+
Sbjct: 590 RTGDDCISIVDKCSNITIQNIECGPGHGISIGSMGQYGAYETVENIYVSDVQFKGSLSGV 649
Query: 154 ------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIR 195
I + N + PI IDQ YCP+ KC+ + + V+ S++ + +I+
Sbjct: 650 RIKTWQGGKGHARKMVFKGITSLNTQYPIQIDQFYCPHAKCDEQADA-VEISDISYIDIK 708
Query: 196 GTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
GTS K +PC+NI + +IN Y G N ++ C NV T G P
Sbjct: 709 GTSMRKTAVKLACSESVPCKNIFMQDINLSYQGTNA-------SAYCKNVNGTSQGIMEP 761
Query: 246 A 246
+
Sbjct: 762 S 762
Score = 37.4 bits (85), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACN 30
VF+V +GA+ +G DDS AF AW + CN
Sbjct: 397 VFDVTQYGAIGNGSTDDSPAFMLAWTDVCN 426
>gi|1346704|sp|P48978.1|PGLR_MALDO RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|456092|gb|AAA74452.1| poly [1,4-a-D-galacturonide] glycan hydrolase [Malus x domestica]
Length = 460
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 126/268 (47%), Gaps = 67/268 (25%)
Query: 25 WREACNWDGIKSAVLVPPGKYL--SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
W+ +C K P G Y ++ FN N+ + + D++ H+ C N++ +
Sbjct: 203 WKNSC-----KIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQAS 257
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGI 126
L +TA DSPNT+GIH+ ++ IS SVI TGDDC+S+ GHGI
Sbjct: 258 CLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGI 317
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPI 164
S+GSLG+ +++ V G+ V +GT N+ N+V NPI
Sbjct: 318 SIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSATNIVFQNVQMNDVTNPI 377
Query: 165 VIDQLYCPYNKCNIKVP-SQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNIN 213
+IDQ YC + + K S V+ NV + NIRGTSA+ +PCQ I + ++
Sbjct: 378 IIDQNYCDHKTKDCKQQKSAVQVKNVLYQNIRGTSASGDAITLNCSQSVPCQGIVLQSVQ 437
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFG 241
+ NG + C+NV+P G
Sbjct: 438 -LQNG----------RAECNNVQPAYKG 454
>gi|356503450|ref|XP_003520521.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 461
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 127/270 (47%), Gaps = 59/270 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C + + P ++ F D T+ + +++ H++ N+K++ L
Sbjct: 178 WKNSCKRNKKRPCKDAP----TALTFYNCEDLTVENLSIENAQQIHVSFQDSVNIKVSGL 233
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
+TA DSPNT+GIH+ ++ +IS SVI TGDDC+S+ GHGIS+
Sbjct: 234 TVTAPEDSPNTDGIHVTNTQNIQISSSVIGTGDDCISIVHGSKDVEATDITCGPGHGISI 293
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG G + E V G+ V GT NI +NV NPI+I
Sbjct: 294 GSLGSGKSKEFVSGIRVNRAKIFGTKNGVRIKTWQGGSGSASDIQFQNIGMDNVTNPIII 353
Query: 167 DQLYCP-YNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWV 215
+Q YC K K+ S ++ NV + NIRGTSA +K PC+ I + NI+
Sbjct: 354 NQNYCDKKKKPCKKMKSAIQIKNVLYQNIRGTSASDIAVKFDCSDKFPCEEIVLQNIDLE 413
Query: 216 YNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
EG + ++C+NV+ + G P
Sbjct: 414 CE------EGDDAEAMCNNVELSYLGNVRP 437
>gi|18412685|ref|NP_565232.1| putative polygalacturonase [Arabidopsis thaliana]
gi|75332048|sp|Q94AJ5.1|PGLR5_ARATH RecName: Full=Probable polygalacturonase At1g80170; Short=PG;
AltName: Full=Pectinase At1g80170; Flags: Precursor
gi|15028105|gb|AAK76676.1| putative polygalacturonase [Arabidopsis thaliana]
gi|23296942|gb|AAN13206.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332198245|gb|AEE36366.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 444
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 106/219 (48%), Gaps = 48/219 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++ F+ + + + +DS+ HI + C + ++ LK+ A A SPNT+GIHI
Sbjct: 175 GAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISV 234
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S G I ++ ++TGDDC+S+ GHGIS+GSLGK + EEV +TV
Sbjct: 235 SRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDITVD 294
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
+ T NI NNV NPI+IDQ YC K S +
Sbjct: 295 TAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAI 354
Query: 185 KTSNVRFNNIRGTSANK----------IPCQNIGIGNIN 213
N+ F ++RGTSA+K PC+NI + +I+
Sbjct: 355 SIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDID 393
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
+ +V +FGA +G+ DD+KAF AW+ AC+ +K+ +LVP
Sbjct: 52 LLHVGNFGAKGNGVTDDTKAFADAWKTACS-SKVKTRILVP 91
>gi|125599503|gb|EAZ39079.1| hypothetical protein OsJ_23511 [Oryza sativa Japonica Group]
Length = 393
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 110/217 (50%), Gaps = 49/217 (22%)
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
+K V+S+ I++ C ++ ++ L ITA +PNT+GIHI S E++ +I TGDDC+
Sbjct: 171 LKVVNSQQIQISVEDCTDVMVSRLSITAPETAPNTDGIHITRSRDVEVTDCMIKTGDDCM 230
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------- 153
S+ GHGIS+GSLG ++ V +TV N GT
Sbjct: 231 SIEDGTENLHVKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTANGARIKTWQG 290
Query: 154 -----------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK- 201
N+V +NV NPI+IDQ YC + + S V+ SNV F NIRGTSA++
Sbjct: 291 GKGSAKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQKSAVEVSNVLFKNIRGTSASEE 350
Query: 202 ---------IPCQNIGIGNINW-VYNGVNVKVEGPET 228
+PC I + N+N V G+++K E P T
Sbjct: 351 AIMLHCSSSVPCHGITLENVNLTVKGGIDLKHEHPWT 387
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
VF+++ +GA DG DD+KA W AC+ + +L+P GK I+ L+
Sbjct: 30 VFSIQSYGAHGDGRHDDTKALGDTWAAACS-SAKPAVLLIPKGKKYLIKHTTLS 82
>gi|125557644|gb|EAZ03180.1| hypothetical protein OsI_25333 [Oryza sativa Indica Group]
Length = 393
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 110/217 (50%), Gaps = 49/217 (22%)
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
+K V+S+ I++ C ++ ++ L ITA +PNT+GIHI S E++ +I TGDDC+
Sbjct: 171 LKVVNSQQIQISVEDCTDVMVSRLSITAPETAPNTDGIHITRSRDVEVTDCMIKTGDDCM 230
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------- 153
S+ GHGIS+GSLG ++ V +TV N GT
Sbjct: 231 SIEDGTENLHVKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQG 290
Query: 154 -----------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK- 201
N+V +NV NPI+IDQ YC + + S V+ SNV F NIRGTSA++
Sbjct: 291 GKGSAKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQKSAVEVSNVLFKNIRGTSASEE 350
Query: 202 ---------IPCQNIGIGNINW-VYNGVNVKVEGPET 228
+PC I + N+N V G+++K E P T
Sbjct: 351 AIMLHCSSSVPCHGITLENVNLTVKGGIDLKHEHPWT 387
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
VF+++ +GA +G DD+KA W AC+ + +L+P GK I+ L+
Sbjct: 30 VFSIQSYGAHGNGRHDDTKALGDTWAAACS-SAKPAVLLIPKGKKYLIKHTTLS 82
>gi|115468430|ref|NP_001057814.1| Os06g0545200 [Oryza sativa Japonica Group]
gi|113595854|dbj|BAF19728.1| Os06g0545200 [Oryza sativa Japonica Group]
Length = 329
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 40/183 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++GI V+ ++FH+N+ C N+ + DL ITA DSPNT+ IHI S+
Sbjct: 118 SLVLDFVNNGLVSGISLVNPKFFHMNMFKCKNITIKDLTITAPEDSPNTDDIHICDSSKI 177
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I +VI TGDDC+S+ G+GISVGSLG+ ++++V +TV+NC
Sbjct: 178 SIIDTVIGTGDDCISIGPGTEGINISGVTCGPGYGISVGSLGRYKDEKDVTDVTVKNCVL 237
Query: 150 -----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
FT NI +V NPI+ID YCP C S+V
Sbjct: 238 KKSTNGVRIKSYEDAASVLTTSKFTYKNIKMEDVANPIIIDMKYCPNKICTANGNSKVTI 297
Query: 187 SNV 189
++
Sbjct: 298 KDI 300
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
G DG D +KA + AW+ AC G K ++ P G +++ FNF
Sbjct: 3 LGGKGDGKTDSTKAVDEAWKAACAGTG-KQTIVFPKGDFVTGPFNF 47
>gi|356537541|ref|XP_003537285.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 428
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 118/247 (47%), Gaps = 54/247 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F D T+ + + + ++ N++++DL +TA DSPNT+GIH+ ++
Sbjct: 185 ALTFYKCKDLTVEDLTIKNGQQMQVSFQNSENVQVSDLTVTAPGDSPNTDGIHVTNTQNI 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+IS+SVI TGDDC+S+ GHGIS+GSLG + + V G+TV+
Sbjct: 245 QISNSVIGTGDDCISIVSGSKDVLATDIICGPGHGISIGSLGAEGSKDFVSGITVKGAQL 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
+GT NI +NV NPI+IDQ YC + S V+ N
Sbjct: 305 SGTTNGLRIKTWQGGSGSASNIQFQNIQMDNVANPIIIDQNYCDQETPCEEQTSAVQIRN 364
Query: 189 VRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V + NI GTSA+ K PCQ I + NI+ G G E + C++V+ +
Sbjct: 365 VLYQNISGTSASDVGVQFDCSKKFPCQGIVLQNIDLKLEG------GGEAKASCNSVELS 418
Query: 239 LFGKQIP 245
G P
Sbjct: 419 YRGDVNP 425
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
NV D+GA DG DD++AF+ AW AC+ G + +VP YL F F
Sbjct: 63 NVNDYGARGDGKTDDTQAFKEAWEVACSSGG--AVFVVPRKNYLLKPFTF 110
>gi|16903125|gb|AAL30418.1|AF434714_1 dehiscence-related endopolygalaturonase [Glycine max]
Length = 428
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 118/247 (47%), Gaps = 54/247 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F D T+ + + + ++ N++++DL +TA DSPNT+GIH+ ++
Sbjct: 185 ALTFYKCKDLTVEDLTIKNGQQMQVSFQNSENVQVSDLTVTAPGDSPNTDGIHVTNTQNI 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+IS+SVI TGDDC+S+ GHGIS+GSLG + + V G+TV+
Sbjct: 245 QISNSVIGTGDDCISIVSGSKDVLATDIICGPGHGISIGSLGAEGSKDFVSGITVKGAQL 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
+GT NI +NV NPI+IDQ YC + S V+ N
Sbjct: 305 SGTTNGLRIKTWQGGSGSASNIQFQNIQMDNVANPIIIDQNYCDQETPCEEQTSAVQIRN 364
Query: 189 VRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V + NI GTSA+ K PCQ I + NI+ G G E + C++V+ +
Sbjct: 365 VLYQNISGTSASDVGVQFDCSKKFPCQGIVLQNIDLKLEG------GGEAKASCNSVELS 418
Query: 239 LFGKQIP 245
G P
Sbjct: 419 YRGDVNP 425
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
NV D+GA DG DD++AF+ AW AC+ G + +VP YL F F
Sbjct: 63 NVNDYGAPGDGKTDDTQAFKEAWEVACSSGG--AVFVVPRKNYLLKPFTF 110
>gi|125597502|gb|EAZ37282.1| hypothetical protein OsJ_21620 [Oryza sativa Japonica Group]
Length = 253
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 40/183 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++GI V+ ++FH+N+ C N+ + DL ITA DSPNT+ IHI S+
Sbjct: 42 SLVLDFVNNGLVSGISLVNPKFFHMNMFKCKNITIKDLTITAPEDSPNTDDIHICDSSKI 101
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT- 149
I +VI TGDDC+S+ G+GISVGSLG+ ++++V +TV+NC
Sbjct: 102 SIIDTVIGTGDDCISIGPGTEGINISGVTCGPGYGISVGSLGRYKDEKDVTDVTVKNCVL 161
Query: 150 -----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
FT NI +V NPI+ID YCP C S+V
Sbjct: 162 KKSTNGVRIKSYEDAASVLTTSKFTYKNIKMEDVANPIIIDMKYCPNKICTANGNSKVTI 221
Query: 187 SNV 189
++
Sbjct: 222 KDI 224
>gi|147846598|emb|CAN83753.1| hypothetical protein VITISV_026267 [Vitis vinifera]
Length = 441
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 58/270 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C D S P ++ F + + +K +++ H++ C ++ + L
Sbjct: 180 WENSCKVDDDLSCKDAP----TALTFYNCKNLVVKNLKIENAQQIHVSFEKCVGVQASGL 235
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
+TA DSPNT+GIH+ + +IS SVI TGDDC+S+ GHGIS+
Sbjct: 236 TVTAPGDSPNTDGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHGISI 295
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG G ++ V +TV T +GT NI ++V+NPI+I
Sbjct: 296 GSLGYGNSEALVSDITVNGATLSGTTNGVRIKTWPGGSGSASNIKFQNIEMHDVDNPIII 355
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVY 216
+Q YC +K V+ NV + NI+GTS ++K PCQ I + +I+
Sbjct: 356 NQKYCDDDKPCESESQAVQVQNVLYQNIKGTSSSSEAIQLDCSSKFPCQGIVLQDIDIXT 415
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPA 246
G G T++C + K T G P+
Sbjct: 416 GG------GKAATAVCXDAKVTEKGDVSPS 439
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
NV D+GA DG D ++AF+ AW AC+ G S ++VP YL F
Sbjct: 77 NVNDYGAKGDG-SDATEAFKKAWEAACSSQG--SVLVVPKNNYLLKPITF 123
>gi|356570487|ref|XP_003553417.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 553
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 127/270 (47%), Gaps = 59/270 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C + + P ++ F D T+ ++ +++ H++ N++++ L
Sbjct: 270 WKNSCKRNKKRPCKDAP----TALTFYNCEDLTVENLRIENAQQIHVSFQDSVNVQVSGL 325
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
+TA DSPNT+GIH+ ++ +IS SVI TGDDC+S+ GHGIS+
Sbjct: 326 NVTAPEDSPNTDGIHVTNTQNIQISSSVIGTGDDCISIVHGSKDVEATDITCGPGHGISI 385
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG G + E V G+ V GT NI +NV NPI+I
Sbjct: 386 GSLGAGKSKEFVSGIRVNRAKIFGTKNGVRIKTWQGGSGSASDIQFQNIEMDNVTNPIII 445
Query: 167 DQLYCP-YNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWV 215
+Q YC K K+ S ++ NV + NI GTSA +K PCQ I + NI+
Sbjct: 446 NQNYCDKKKKPCKKLKSAIQIKNVLYQNITGTSASDIAVRFDCSDKFPCQEIVLQNIDLQ 505
Query: 216 YNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
G G + ++C+NV+ + G P
Sbjct: 506 CEG------GDDADAMCNNVELSYLGHVRP 529
>gi|115465197|ref|NP_001056198.1| Os05g0542800 [Oryza sativa Japonica Group]
gi|52353424|gb|AAU43992.1| unknown protein [Oryza sativa Japonica Group]
gi|113579749|dbj|BAF18112.1| Os05g0542800 [Oryza sativa Japonica Group]
Length = 408
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 112/267 (41%), Gaps = 52/267 (19%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
VF V D G D A W +C K V K L +F ++ G
Sbjct: 121 VFRVDDLSVSGGGTIDGMGA--EWWARSCKRKKTKPCSTVSAPKAL--QFEECRRVSVQG 176
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
I + FH+ C ++K + L++ A SPNT+GIH+ + ++I ++I+TGDDCV
Sbjct: 177 ITMQNGPQFHLMFTRCTDVKASFLRVVAPESSPNTDGIHLNDTTHAQIMDNLISTGDDCV 236
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN---------- 154
S+ GHGIS+GSLGK + + + V C T T
Sbjct: 237 SMVGNCSDVRVKDISCGPGHGISIGSLGKNRTTDRIENVRVDTCLLTNTTNGVRIKSWQG 296
Query: 155 ------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK- 201
IV NV NPI+IDQ YC V+ + F IRGTSA +
Sbjct: 297 GMGYAHNLRFEGIVMKNVSNPIIIDQYYCDQPTPCANQTQAVEVRKIEFAGIRGTSATEQ 356
Query: 202 ---------IPCQNIGIGNINWVYNGV 219
+PC+++ + N+N GV
Sbjct: 357 AIKLACSDAVPCRDLELRNVNLTMVGV 383
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 14/99 (14%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSI----------- 48
+ + DFGAV DGI +D++AF AW AC + AVL VP GK I
Sbjct: 34 LLTLDDFGAVGDGITNDTQAFLDAWNAACA--STEPAVLAVPAGKTYQIWPVRLAGPCKK 91
Query: 49 RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
+ + TI S D Y +++DL ++
Sbjct: 92 KLKLMISGTIAAPASPDEWAGRDPTKWLYVFRVDDLSVS 130
>gi|59860148|gb|AAX09642.1| polygalacturonase [Malus x domestica]
Length = 292
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 112/234 (47%), Gaps = 56/234 (23%)
Query: 25 WREACNWDGIKSAVLVPPGKYL--SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
W+ +C K P G Y ++ FN N+ + + D++ H+ C N++ +
Sbjct: 62 WKNSC-----KIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQAS 116
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGI 126
L +TA DSPNT+GIH+ ++ IS SVI TGDDC+S+ GHGI
Sbjct: 117 RLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGI 176
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPI 164
S+GSLG+ +++ V G+ V +GT N+ N+V NPI
Sbjct: 177 SIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSVTNIVFQNVQMNDVTNPI 236
Query: 165 VIDQLYCPYNKCNIKVP-SQVKTSNVRFNNIRGTSAN----------KIPCQNI 207
+IDQ YC + + K S V+ NV + NIRGTSA+ +PCQ I
Sbjct: 237 IIDQNYCDHKTKDCKQQKSAVQVKNVLYQNIRGTSASGDAITLNCSQSVPCQGI 290
>gi|449471477|ref|XP_004153320.1| PREDICTED: polygalacturonase-like, partial [Cucumis sativus]
Length = 295
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 81/124 (65%), Gaps = 16/124 (12%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++++ NF+ +S + I S+DS+ +HIN+LGC NL ++ + ITA +SPNT+GIH+ SS
Sbjct: 147 MTLKLNFITNSIVKDITSLDSKNYHINLLGCKNLTIDHVTITAPGNSPNTDGIHVSSSEQ 206
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ IATGDDC+S+ GHGIS+GSLGK ++EVVG+TV+ C
Sbjct: 207 INILNTNIATGDDCISVGDTNKQIVISDVTCGPGHGISIGSLGKYTKEKEVVGVTVKKCK 266
Query: 150 FTGT 153
T T
Sbjct: 267 LTST 270
>gi|226528677|ref|NP_001140231.1| uncharacterized protein LOC100272271 precursor [Zea mays]
gi|194698606|gb|ACF83387.1| unknown [Zea mays]
Length = 472
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/256 (31%), Positives = 120/256 (46%), Gaps = 61/256 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F++ + + +K V+S+ H++I C +++++ L ITA SPNT+GIHI S
Sbjct: 190 ALSFHYCTNLRVENLKMVNSQQIHMSIEDCASVQVSRLSITAPGTSPNTDGIHITRSKDV 249
Query: 107 EISHSVIATG-DDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+++ I TG DDC+S+ GHGISVGSLG + EV G+T+ +
Sbjct: 250 RVTNCKIKTGSDDCMSIEDGTHGLHVSGVVCGPGHGISVGSLGDDDSRAEVSGITIDSVQ 309
Query: 150 FTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP-----S 182
GT N+ + V NPIVIDQ YC ++ + P S
Sbjct: 310 LHGTTNGARIKTYQGGSGYARDITFQNMAMHGVRNPIVIDQSYC--DRAEAEPPCRERRS 367
Query: 183 QVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V F NIRGT+ + +PC+ I + NI+ G E S C
Sbjct: 368 AVQISDVVFRNIRGTTVTRDAIRMSCSRNVPCRGIVLQNIDLKMQGGQGHAE-----STC 422
Query: 233 SNVKPTLFGKQIPATC 248
N K GK +P C
Sbjct: 423 RNAKWRKSGKVVPQPC 438
>gi|357130709|ref|XP_003566989.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 424
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 53/250 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + + ++ ++S+ H+++ C +++++ L ITA + SPNT+GIHI S
Sbjct: 175 ALTFYSCTNLKVNNLELLNSQQIHMSVECCSDVRISRLSITAPSTSPNTDGIHIAHSKDV 234
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ I TGDDC+S+ GHGIS+GSLG ++ EV +T+
Sbjct: 235 KVRDCAIKTGDDCMSIEDGTKNLHVKNIVCGPGHGISIGSLGDRNSEAEVANITIDGVRL 294
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
GT NI+ +NV NPI+I+Q YC K S V+ SN
Sbjct: 295 HGTTNGARIKTWQGGRGYAKNIVFQNIIMDNVWNPIIINQNYCDSATPCKKQQSAVEVSN 354
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F NIRGTSA++ +PC I + N+ + +K + S C N +
Sbjct: 355 VLFKNIRGTSASREAIKLNCSPTVPCHGIALHNVR-----LTLKRGSGDAKSTCHNAQWR 409
Query: 239 LFGKQIPATC 248
G +P C
Sbjct: 410 KLGTVMPQPC 419
>gi|225441688|ref|XP_002282772.1| PREDICTED: polygalacturonase [Vitis vinifera]
gi|297739723|emb|CBI29905.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 115/237 (48%), Gaps = 54/237 (22%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +K +++ H++ C ++ + L +TA DSPNT+GIH+ + +IS SVI TGD
Sbjct: 210 VKNLKIQNAQQMHVSFEKCVGVQASGLTVTAPGDSPNTDGIHVTDTQNIQISSSVIGTGD 269
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG G ++ V +TV T +GT
Sbjct: 270 DCISIVSGTQNLQATGITCGPGHGISIGSLGSGNSEAHVSDITVNGATLSGTTNGVRIKT 329
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS- 198
NI ++V+NPI+I+Q YC +K V+ NV + NI+GTS
Sbjct: 330 WQGGSGSASNIKFQNIEMHDVDNPIIINQKYCDDDKPCESESQAVQVQNVLYQNIKGTSS 389
Query: 199 ---------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA 246
++K PCQ I + +I+ G G T++C++ K T G P+
Sbjct: 390 SSEAIQLDCSSKFPCQGIVLQDIDIETGG------GKAATAVCNDAKVTEKGDVSPS 440
>gi|399764474|gb|AFP50437.1| polygalacturonase 11a, partial [Medicago tornata]
Length = 151
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 82/151 (54%), Gaps = 41/151 (27%)
Query: 69 FHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------ 122
FH+ + GC N+ + +TA ADSPNT+GIH+G S +I ++ I TGDDCVSL
Sbjct: 2 FHV-MFGCNNITFDGFTVTAPADSPNTDGIHMGRSTDVKILNTNIGTGDDCVSLGDGSRK 60
Query: 123 ----------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------- 153
GHGISVGSLG+ ++ V G+TV+NCT T T
Sbjct: 61 ITVQGVKCGPGHGISVGSLGRYTTEDNVEGVTVKNCTLTATQNGVRIKTWPDAPGTITVF 120
Query: 154 -----NIVTNNVENPIVIDQLYCPYNKCNIK 179
+I NNV NPI+IDQ YCP+N CN K
Sbjct: 121 DIHFEDITMNNVLNPIIIDQEYCPWNACNKK 151
>gi|225441690|ref|XP_002277234.1| PREDICTED: polygalacturonase [Vitis vinifera]
gi|297739722|emb|CBI29904.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 125/270 (46%), Gaps = 58/270 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C D S P ++ F + + +K +++ H++ C ++ + L
Sbjct: 180 WENSCKVDDDLSCKDAP----TALTFYNCKNLVVKNLKIENAQQIHVSFEKCVGVQASGL 235
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
+TA DSPNT+GIH+ + +IS SVI TGDDC+S+ GHGIS+
Sbjct: 236 TVTAPGDSPNTDGIHVTDTQNIQISSSVIGTGDDCISIVSGTQNLQATGITCGPGHGISI 295
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG G ++ V +TV T +GT NI ++V+NPI+I
Sbjct: 296 GSLGYGNSEALVSDITVNGATLSGTTNGVRIKTWPGGSGSASNIKFQNIEMHDVDNPIII 355
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVY 216
+Q YC +K V+ NV + NI+GTS ++K PCQ I + +I+
Sbjct: 356 NQKYCDDDKPCESESQAVQVQNVLYQNIKGTSSSSEAIQLDCSSKFPCQGIVLQDIDIET 415
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPA 246
G G T++C++ K T G P+
Sbjct: 416 GG------GKAATAVCNDAKVTEKGDVSPS 439
Score = 37.7 bits (86), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
NV D+GA DG D ++AF+ AW AC+ G S ++VP YL F
Sbjct: 77 NVNDYGAKGDG-SDATEAFKKAWEAACSSQG--SVLVVPKNNYLLKPITF 123
>gi|413943669|gb|AFW76318.1| hypothetical protein ZEAMMB73_347158 [Zea mays]
Length = 321
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 55/224 (24%)
Query: 68 YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----- 122
+FH+N+ ++ + D+ + A DSPNT+GIH+G S+G I+++VI GDDC+S+
Sbjct: 95 FFHMNMYRRKDMLIKDVTVMAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTS 154
Query: 123 -----------GHGISVGSLGKGINDEEVVGLTVRNCTFTG------------------- 152
GHGIS+GSLG+ ++++V + V++ T
Sbjct: 155 KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDSTLKKKIFDVRIKAYEDATSVLTV 214
Query: 153 -----TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN------- 200
NI + NPI ID YCP C S+V +V F NI TS+
Sbjct: 215 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITDTSSTPEAVSLL 274
Query: 201 ---KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
KIPC + + ++N Y+G N K T ++C+N K + G
Sbjct: 275 CTAKIPCTGVTMDDVNVEYSGTNNK-----TMAICTNAKGSTKG 313
>gi|297839921|ref|XP_002887842.1| hypothetical protein ARALYDRAFT_477239 [Arabidopsis lyrata subsp.
lyrata]
gi|297333683|gb|EFH64101.1| hypothetical protein ARALYDRAFT_477239 [Arabidopsis lyrata subsp.
lyrata]
Length = 444
Score = 107 bits (266), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 103/219 (47%), Gaps = 48/219 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G +I F+ + + + +DS+ HI C + ++ LK+ A A SPNT+GIHI
Sbjct: 175 GAPTAITFHKCKNMRVENLNVIDSQQMHIAFTSCRRVAISGLKVIAPATSPNTDGIHISV 234
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S G I ++ ++TGDDCVS+ GHGIS+GSLGK + EEV +TV
Sbjct: 235 SRGIVIDNTTVSTGDDCVSIVKNSSQISISNIICGPGHGISIGSLGKSESWEEVRDITVD 294
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
+ T NI NNV NPI+IDQ YC K S +
Sbjct: 295 TAFISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAL 354
Query: 185 KTSNVRFNNIRGTSANKI----------PCQNIGIGNIN 213
N+ F +RGTSA K PC+NI + +++
Sbjct: 355 SVENISFVYVRGTSATKQAIKISCSDSSPCRNILLQDVD 393
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
+ +V FGA +G DD+KAF AW+ AC+ +K+ +LVP
Sbjct: 52 LLHVGKFGAKGNGFTDDTKAFADAWKTACS-SKVKTRILVP 91
>gi|3320462|gb|AAC26512.1| polygalacturonase precursor [Cucumis melo]
Length = 461
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 119/247 (48%), Gaps = 49/247 (19%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + + G++ +++ ++ C N+K +L I A +SPNT+GIH+ +
Sbjct: 211 AVTFYQCTNLRVEGLRFRNAQQMLLSFQRCNNVKALNLWIYAPGNSPNTDGIHVTGTQFI 270
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I + +I TGDDC+S+ GHGIS+GSLG G ++ EV + V F
Sbjct: 271 VIKNCLIMTGDDCISIVSGSKNVRAKGITCGPGHGISIGSLGAGKSEAEVSNVVVDTAKF 330
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
+GT NIV +NV NPI+I+Q YC + + V SN
Sbjct: 331 SGTSNGVRIKTWQGGKGYAQNIIFQNIVMDNVTNPIIINQNYCDQKEPCTQQADAVAVSN 390
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V + NIRGTSA++ +PCQ I + +IN V+ G N + + + C NVK
Sbjct: 391 VMYQNIRGTSASEVAVKFDCSKSVPCQGILLQDINLVHKGKN-DDKSAQAEASCKNVKWK 449
Query: 239 LFGKQIP 245
G+ P
Sbjct: 450 NRGRVSP 456
Score = 40.4 bits (93), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+FNV D+GA+ DG +DD++AF+ W++AC+ + LVP + ++
Sbjct: 87 IFNVDDYGAMGDG-EDDTEAFKETWKDACS--STNAIFLVPCDRVYHLK 132
>gi|222635662|gb|EEE65794.1| hypothetical protein OsJ_21499 [Oryza sativa Japonica Group]
Length = 425
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 40/166 (24%)
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------G 123
+ + L+I A A S NT+GIH+G S+ ++ S++ TGDDCVS+ G
Sbjct: 192 RRSRLRIEAPAASRNTDGIHVGLSSHVTVADSLVGTGDDCVSIGPGSSGVVIAGVACGPG 251
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNV 160
HGISVGSLG+ + +V GL VRNCT GT +IV +NV
Sbjct: 252 HGISVGSLGREEGEGDVRGLVVRNCTVVGTTNGLRIKTWPGSPPSRAFNITFRDIVMSNV 311
Query: 161 ENPIVIDQLYCPYNKC-NIKVPSQVKTSNVRFNNIRGTSANKIPCQ 205
NPI+IDQ YCP+ C +I PS V+ S+V + I GTS++++ Q
Sbjct: 312 SNPIIIDQHYCPHAHCSDIAKPSLVQISDVTYERIEGTSSSRVAVQ 357
>gi|28411798|dbj|BAC57273.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|50508418|dbj|BAD30433.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
Length = 422
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 57/260 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C + P ++ F ++ + +K ++S+ H+++ C +++++ L
Sbjct: 161 WQNSCKTNAKLPCTEAPT----ALTFYSCSNLKVENLKLLNSQQIHMSVEDCTDVRISSL 216
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA SPNT+GIHI S +++ +I TGDDC+S+ GHGIS+
Sbjct: 217 TITAPGTSPNTDGIHITRSKNVQVTGCIIKTGDDCMSIEDGTENLHVKNMVCGPGHGISI 276
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG ++ V +TV GT N++ NV NPI+I
Sbjct: 277 GSLGDHNSEAHVNNVTVDTVRLYGTTNGARIKTWQGGWGYAKNIVFQNMIMENVWNPIII 336
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVY 216
DQ YC + S V+ SNV F NIRGTSA+K +PCQ I + ++
Sbjct: 337 DQNYCDSATPCKEQTSAVQVSNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLKDVK--- 393
Query: 217 NGVNVKVEGPETTSLCSNVK 236
+ +K G + S C N K
Sbjct: 394 --LTIKGGGSDAKSTCGNAK 411
>gi|449527009|ref|XP_004170505.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Cucumis
sativus]
Length = 395
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 103/191 (53%), Gaps = 42/191 (21%)
Query: 39 LVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGI 98
++PP SI+FN + + GI SV+S+ FHI ++ +N+K+N++ I A +SPNT+G+
Sbjct: 183 IIPP---TSIKFNKVTQGLMEGITSVNSKAFHIFVVLSHNIKINNVHIVAPGNSPNTDGV 239
Query: 99 HIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVG 142
HI ++ +++S+I TGDDCVS+ GHGISVGSLGK +++EV G
Sbjct: 240 HISQTDVVNVTNSIIGTGDDCVSIGHGSTNINVLNITCGPGHGISVGSLGKYRDEKEVRG 299
Query: 143 LTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIK 179
+ V NCT T NIV + V NPI+IDQ Y K ++
Sbjct: 300 IFVSNCTIRNTTNGVRIKTWAASPPGQATRITFQNIVLDKVRNPIIIDQNYGSKTKKSVT 359
Query: 180 VPSQVKTSNVR 190
+ + + V+
Sbjct: 360 ISGEGQRRPVQ 370
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
VFN+ GA ADG D ++AF AW +AC+ G + V+ PPG +L+
Sbjct: 66 VFNIIAHGAKADGRTDSTQAFMQAWVKACHSSG-PAKVVFPPGTFLT 111
>gi|449431860|ref|XP_004133718.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 427
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 114/243 (46%), Gaps = 50/243 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W +S P G S+ F + I+G+ S++S+ +HI + C N+K+ L I A A
Sbjct: 156 WACKQSGKTCPRGT-TSLEFTNSQNILISGLTSLNSQIYHIVMNKCRNVKMESLNIYAPA 214
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
+SPNT+GI + + + I S I TGDDC+SL GHGISVGSLG+
Sbjct: 215 NSPNTDGIDLEETTYATILDSNIGTGDDCISLGHGTFNVFIQNVFCGPGHGISVGSLGRK 274
Query: 135 INDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYC 171
+ V +TV++C + T +I NV+ PI+IDQ YC
Sbjct: 275 EKENGVQNVTVQSCRLSNTQNGVRIKSWGRPSTGFGRDIRFQHITMTNVKYPIIIDQNYC 334
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNV 221
P+++ S VK SNV + +I GTSA K PC+ I + ++ Y
Sbjct: 335 PHHQDCPGQDSGVKISNVTYQSIYGTSATLVAIKMDCSPKFPCKGIVLDDVKLTYKNGKA 394
Query: 222 KVE 224
K
Sbjct: 395 KAS 397
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 2 FNVKDFGAVADGIK-DDSKAFETAWREACNWDGIKSAVLVPPGKY 45
FNV D+GA D K D +KAF++AW AC+ + + VP K+
Sbjct: 50 FNVVDYGAKPDNTKFDSAKAFQSAWTHACS-SSKAATIYVPKAKF 93
>gi|125599501|gb|EAZ39077.1| hypothetical protein OsJ_23509 [Oryza sativa Japonica Group]
Length = 498
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 57/260 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C + P ++ F ++ + +K ++S+ H+++ C +++++ L
Sbjct: 161 WQNSCKTNAKLPCTEAPT----ALTFYSCSNLKVENLKLLNSQQIHMSVEDCTDVRISSL 216
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA SPNT+GIHI S +++ +I TGDDC+S+ GHGIS+
Sbjct: 217 TITAPGTSPNTDGIHITRSKNVQVTGCIIKTGDDCMSIEDGTENLHVKNMVCGPGHGISI 276
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG ++ V +TV GT N++ NV NPI+I
Sbjct: 277 GSLGDHNSEAHVNNVTVDTVRLYGTTNGARIKTWQGGWGYAKNIVFQNMIMENVWNPIII 336
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVY 216
DQ YC + S V+ SNV F NIRGTSA+K +PCQ I + ++
Sbjct: 337 DQNYCDSATPCKEQTSAVQVSNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLKDVK--- 393
Query: 217 NGVNVKVEGPETTSLCSNVK 236
+ +K G + S C N K
Sbjct: 394 --LTIKGGGSDAKSTCGNAK 411
>gi|449485383|ref|XP_004157151.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 400
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 109/240 (45%), Gaps = 56/240 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I G+ S +S+ FHI I GC N+ + ++ + A ++SPNT+GIH+ +S I S+I TGD
Sbjct: 166 IRGLVSRNSQLFHIVINGCKNVLVEEVNVIAASNSPNTDGIHVETSTHVTIIDSIIQTGD 225
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN------- 154
DC+S+ GHGIS+GSL +N+ V +TV N F GT
Sbjct: 226 DCISIGPGSYNLWIQRIRCGPGHGISIGSLAHNMNEPGVGNITVANAIFYGTQNGLRIKS 285
Query: 155 ----------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS 198
+NV+NPI+IDQ YCP N S +K SN+ + +I GTS
Sbjct: 286 WARPSTGFVYGVQFLGATMHNVQNPILIDQHYCPNNFDCPDQESGIKISNIIYKDIVGTS 345
Query: 199 ANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
A I PC I + ++ Y + E S C K G P C
Sbjct: 346 ATPIAIKFDCSSKNPCNGIRLEDVRLTY-------QNEEAKSSCEYAKGKTLGLVQPEGC 398
>gi|242032587|ref|XP_002463688.1| hypothetical protein SORBIDRAFT_01g004230 [Sorghum bicolor]
gi|241917542|gb|EER90686.1| hypothetical protein SORBIDRAFT_01g004230 [Sorghum bicolor]
Length = 436
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 121/273 (44%), Gaps = 57/273 (20%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C + + P ++ F+ + + +K ++ + H+++ C ++ L L
Sbjct: 170 WPHSCKINKTLPCKVAP----TALSFHHCTNLRVDNLKIMNGQQMHMSVEDCTDVVLARL 225
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA A SPNT+GIHI S +++ I TGDDC+S+ GHGIS+
Sbjct: 226 SITAPARSPNTDGIHITRSKNVRVTNCKIKTGDDCMSIENGTHNLHVSKVVCGPGHGISI 285
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + EV G+T+ + GT N++ V+NPI+I
Sbjct: 286 GSLGDDNSRAEVSGITIDSVQLYGTTNGARIKTYQGGSGYAKDITFQNMIMYGVKNPIII 345
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVY 216
DQ YC + S V+ SNV F NIRGT+ K +PCQ I + NI+
Sbjct: 346 DQNYCDKATPCAEQRSAVRVSNVVFKNIRGTTITKHAIKMNCSKNVPCQGITLKNIDMKL 405
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
G ++ S C N K G P C+
Sbjct: 406 KGGKGNID-----STCQNAKWRKSGFVHPQPCI 433
>gi|255553564|ref|XP_002517823.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223543095|gb|EEF44630.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 446
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 126/269 (46%), Gaps = 58/269 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C D K + P ++ F+ + + + +++ H+ C N++ +L
Sbjct: 186 WDNSCKIDKSKPCIGAP----TAVTFSDCKNLIVANLWFQNAQQMHLTFQKCKNVRALNL 241
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
+TA SPNT+GIH+ S+ I + VI TGDDC+S+ GHGIS+
Sbjct: 242 IVTAPGKSPNTDGIHVTSTQNIRIRNCVIRTGDDCLSIESGSKNVEATDIVCGPGHGISI 301
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG G ++ EV + V T +GT NIV NNV NPI+I
Sbjct: 302 GSLGDGNSEAEVSNVLVNRATLSGTTNGVRIKTWQGGSGFAKNIVFQNIVMNNVTNPIII 361
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVY 216
DQ YC + + S V+ SNV + +I+GTSA++ PCQ I + ++
Sbjct: 362 DQNYCDQDDPCPEQKSAVQVSNVVYKSIKGTSASETAMKFDCSKTFPCQGILLQDVAL-- 419
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
N +V+ + + C+NV + GK P
Sbjct: 420 --GNQRVDNAKAS--CANVNLSSRGKVYP 444
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
+ NV+DFGA ADG D S+AF+ AW EAC+ + +SA++V P
Sbjct: 79 IVNVEDFGAKADGT-DASEAFKKAWEEACSSE--ESAIIVVP 117
>gi|28411800|dbj|BAC57275.1| putative polygalacturonase precursor [Oryza sativa Japonica Group]
Length = 405
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 111/236 (47%), Gaps = 53/236 (22%)
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
+K V+S+ I++ C ++ ++ L ITA +PNT+GIHI S E++ +I TGDDC+
Sbjct: 171 LKVVNSQQIQISVEDCTDVMVSRLSITAPETAPNTDGIHITRSRDVEVTDCMIKTGDDCM 230
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------- 153
S+ GHGIS+GSLG ++ V +TV N GT
Sbjct: 231 SIEDGTENLHVKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTANGARIKTWQG 290
Query: 154 -----------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK- 201
N+V +NV NPI+IDQ YC + + S V+ SNV F NIRGTSA++
Sbjct: 291 GKGSAKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQKSAVEVSNVLFKNIRGTSASEE 350
Query: 202 ---------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
+PC I + N+N + VK S C N + G P C
Sbjct: 351 AIMLHCSSSVPCHGITLENVN-----LTVKGGSSNAKSTCQNAEWKKSGSVSPQPC 401
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
VF+++ +GA DG DD+KA W AC+ + +L+P GK I+ L+
Sbjct: 30 VFSIQSYGAHGDGRHDDTKALGDTWAAACS-SAKPAVLLIPKGKKYLIKHTTLS 82
>gi|148909947|gb|ABR18059.1| unknown [Picea sitchensis]
Length = 493
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 121/276 (43%), Gaps = 58/276 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
E W E+C + P +I F N+ + + +S+ HI C +K
Sbjct: 193 EQWWAESCKINKTNPCRPAP----TAITFELCNNLRVMNLIVQNSQQMHIKFRKCVGVKA 248
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
++LK+ A SPNT+GIH+ +S I +++ TGDDC+S+ GHG
Sbjct: 249 DNLKVLAPGHSPNTDGIHVSASKDVVIKNTITGTGDDCISIVSDSFNIYIENITCGPGHG 308
Query: 126 ISVGSLGKGINDEEVVGLTV------------RNCTFTGT----------NIVTNNVENP 163
IS+GSLG+G V + V R T+ G+ N+ NV++P
Sbjct: 309 ISIGSLGEGSAKARVADVMVHGAFLHNTTNGLRIKTWQGSSGSARRILFQNVHMENVKHP 368
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNIN 213
I+IDQ YC K S VK S V + NI+GTSA+K +PC+NI + +I+
Sbjct: 369 IIIDQYYCDSKKPCSNKTSAVKVSEVAYLNIKGTSASKEVMRFACSQTVPCENILLADID 428
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
G T+ C N G P +C+
Sbjct: 429 L------TATSGCTPTTYCENAIGCTTGSVSPHSCL 458
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYL--SIRFNFLNDST 57
V V +FGA DG DD+KAF AW +AC+ + LVP G KYL I+F+ S
Sbjct: 88 VVCVDEFGAKGDGENDDTKAFNNAWSKACS--SAPAVFLVPHGKKYLVKPIKFSGPCKSA 145
Query: 58 IT 59
+T
Sbjct: 146 LT 147
>gi|357142175|ref|XP_003572483.1| PREDICTED: LOW QUALITY PROTEIN: exopolygalacturonase-like
[Brachypodium distachyon]
Length = 465
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 102/221 (46%), Gaps = 60/221 (27%)
Query: 45 YLSIRFNFLND----STITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
Y S+ + D +T+ G+ DSR FH++I ++ L+I+A A S NT+G+H+
Sbjct: 166 YFSLTQTLVLDGVASATVRGLAFTDSRGFHVSIHRSTHVSAQSLRISAPATSRNTDGVHV 225
Query: 101 GSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGI------NDE 138
G S I S I TGDDCVS+ GHGIS+GSLGK +
Sbjct: 226 GFSKHVSILGSAIGTGDDCVSIGPGSTDVLVSGVSCGPGHGISIGSLGKHKPNNNNGGGD 285
Query: 139 EVVGLTVRNCTFTGT------------------------------NIVTNNVENPIVIDQ 168
EV G+ VRNCT GT ++ V+NP+VIDQ
Sbjct: 286 EVRGVVVRNCTVKGTANGVRIKTWPGPPSSSSAPAGGLAYNITFEDVAMAGVQNPVVIDQ 345
Query: 169 LYCPYNKCNIKV----PSQVKTSNVRFNNIRGTSANKIPCQ 205
YCP+ C PS V+ S V F IRGT++ ++ +
Sbjct: 346 HYCPHGSCGGATARGRPSLVQISEVVFRRIRGTASGEVAVR 386
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
V +V +GA + G KD+ +AF TAWR AC + VLVP G ++
Sbjct: 31 VHDVTVYGA-SPGSKDNKRAFLTAWRAACGSTAGNATVLVPEGAFV 75
>gi|449433419|ref|XP_004134495.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
gi|449503881|ref|XP_004162215.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 425
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/217 (35%), Positives = 109/217 (50%), Gaps = 49/217 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S++ + + + T++ I VDS+ FH++I C N+ L+ ITA S NT+G HI S
Sbjct: 170 ISLKLSNVLNGTVSSINLVDSKAFHVSIHQCDNIHLSGFNITAPWYSQNTDGFHISQSTN 229
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I++S I GDDCVS+ GHGIS+GSLG+ + +V G+ V NCT
Sbjct: 230 ISITNSKIGVGDDCVSIGPGSVNVLVSNVTCGPGHGISIGSLGRYKMENDVRGIWVENCT 289
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
+GT NIV NV NPI+IDQ YCP + C+ + S VK
Sbjct: 290 ISGTQNGVRVKTWPGDHASNATNLTFQNIVMINVSNPIIIDQQYCPNSSCDSRESSSVKL 349
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNIN 213
S++ NI GT ++ C+NI + IN
Sbjct: 350 SDINIRNISGTYNSEFAINMKCSSTKACENIRLSYIN 386
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
VF+V D+G VADG ++S A AW +AC G S +L+P G Y + F
Sbjct: 47 VFDVNDYGGVADGKTNNSLALMAAWEDACYHQG-GSMLLIPEGNYFVDQVTF 97
>gi|125599506|gb|EAZ39082.1| hypothetical protein OsJ_23514 [Oryza sativa Japonica Group]
Length = 321
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 110/228 (48%), Gaps = 50/228 (21%)
Query: 39 LVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGI 98
+VP +I +F+ + +K V+S+ I++ C ++K++ L ITA +PNT+GI
Sbjct: 58 MVPMTNKENIGKHFI--LKVENLKVVNSQQIQISVEDCTDVKMSRLSITAPETAPNTDGI 115
Query: 99 HIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVG 142
HI S +++ I TGDDC+S+ GHGIS+GSLG ++ V
Sbjct: 116 HITRSRDVQVTDCTIKTGDDCMSIEDGTKNLHVKNMVCGPGHGISIGSLGDHNSEAHVNN 175
Query: 143 LTVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKV 180
+TV N GT N+V +NV NPI+IDQ YC + +
Sbjct: 176 VTVDNVRLYGTTNGARIKTWQGGKGSAKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQ 235
Query: 181 PSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNG 218
S V+ SN+ F NIRGTSA N +PC I + N+N G
Sbjct: 236 KSAVEVSNLLFKNIRGTSASEEAIVLHCSNSVPCHGITLENVNLTVKG 283
>gi|449464038|ref|XP_004149736.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 435
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 103/220 (46%), Gaps = 53/220 (24%)
Query: 65 DSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL-- 122
D++ H+ C N+K +L++ A +SPNT+GIHI + + I + VI TGDDC+S+
Sbjct: 210 DAQQMHLTFQKCTNVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVS 269
Query: 123 --------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT--------------- 153
GHGIS+GSLG ++ EV + V +GT
Sbjct: 270 GSRNVQAMDITCGPGHGISIGSLGADNSEAEVSNIRVNRALISGTSNGVRIKTWQGGSGY 329
Query: 154 -------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN------ 200
N+V NV NPI+IDQ YC + + S VK SNV + NIRGTSA+
Sbjct: 330 AKNIMFQNVVMRNVSNPIIIDQNYCDKKESCPEQKSAVKVSNVVYKNIRGTSASGDAIKF 389
Query: 201 ----KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
PCQ I + I V G V T+ C NV+
Sbjct: 390 DCSKSFPCQGISLLGIRIVGQGNEEAV-----TASCENVR 424
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
V NV DFGA +G +DD+KAFE AW+EAC+ K+ +LVP G+ ++
Sbjct: 67 VVNVDDFGAKGNG-QDDTKAFELAWKEACS--SRKATLLVPKGRTYYLK 112
>gi|3320460|gb|AAC26511.1| polygalacturonase precursor [Cucumis melo]
Length = 423
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 113/231 (48%), Gaps = 49/231 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S++F + I+G+ S++S+ +HI I C N+++ L I A A+SPNT+GI +
Sbjct: 167 PRGTTSLQFTNSQNIVISGLTSLNSQIYHIVINKCRNVRMERLNIYAPANSPNTDGIDLE 226
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
++ I S I TGDDC+S+ GHGIS+GSLG+ + V +TV
Sbjct: 227 ETSYVTILDSNIGTGDDCISVGPGTSNVLIQNIYCGPGHGISIGSLGRKERENGVQNVTV 286
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
++C T +I +V+NPIVI+Q YCP+N+ S
Sbjct: 287 QSCRLKKTQNGVRIKSWGRPSTGFATNIRFQHITMTDVKNPIVINQNYCPHNQGCPGKES 346
Query: 183 QVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKV 223
+K S+V + +I GTSA+ K PC+ I + N+ Y N K
Sbjct: 347 GIKISDVTYKSIYGTSASLVAIKLDCSPKFPCKGIVLENVQLTYKNGNAKA 397
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 2 FNVKDFGAVADGIK-DDSKAFETAWREACNWDGIKSAVLVPPGKY 45
FNV DFGA + IK D SKAFE+AW++AC+ + + VP K+
Sbjct: 51 FNVVDFGAKPNNIKIDSSKAFESAWKQACS-SSRAATIYVPKAKF 94
>gi|28411803|dbj|BAC57278.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 461
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 102/209 (48%), Gaps = 48/209 (22%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +K V+S+ I++ C ++K++ L ITA +PNT+GIHI S +++ I TGD
Sbjct: 215 VENLKVVNSQQIQISVEDCTDVKMSRLSITAPETAPNTDGIHITRSRDVQVTDCTIKTGD 274
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG ++ V +TV N GT
Sbjct: 275 DCMSIEDGTKNLHVKNMVCGPGHGISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKT 334
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
N+V +NV NPI+IDQ YC + + S V+ SN+ F NIRGTSA
Sbjct: 335 WQGGKGSAKNIVFQNMVMDNVWNPIIIDQNYCDSSTPCKQQKSAVEVSNLLFKNIRGTSA 394
Query: 200 ----------NKIPCQNIGIGNINWVYNG 218
N +PC I + N+N G
Sbjct: 395 SEEAIVLHCSNSVPCHGITLENVNLTVKG 423
>gi|356550861|ref|XP_003543801.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 424
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 115/246 (46%), Gaps = 59/246 (23%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
F F+N+S I I S DS+YFH+NILGC N+ + ++++ A SPNT G HI S +I+
Sbjct: 184 FGFVNNSVIQDITSKDSKYFHVNILGCKNITFTNFEVSSLAYSPNTNGSHIEKSTQVKIT 243
Query: 110 HSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
I T +D +SLG H ISV SL K N+E V L V+NCT T
Sbjct: 244 K--IDTDNDYISLGDGSKEVIILNVTCGLEHSISVRSLXKYSNEEFVEDLNVKNCTLRNT 301
Query: 154 N------------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
N NV N I+IDQ C +N+C P ++K S +
Sbjct: 302 NNGLRIKTWPGTPINSLAFDLHFEDTKMINVINLIIIDQEXCQWNQCAKXSPXKIKISKI 361
Query: 190 RFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
F NI GTS + +P + + + +I+ +NG + T +N+K
Sbjct: 362 TFKNITGTSITREGVXLVCRSDVPFEIVDLNDIDIRFNGTTL------ATGKYANIKSN- 414
Query: 240 FGKQIP 245
FG++ P
Sbjct: 415 FGRKAP 420
>gi|147840305|emb|CAN70684.1| hypothetical protein VITISV_031809 [Vitis vinifera]
Length = 256
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 78/120 (65%), Gaps = 16/120 (13%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+RFNF+ +S + I S D++ F + +LGC NL ++ I+A S NT+GIHIG S+G
Sbjct: 133 LRFNFITNSMVKDITSRDNKQFQMXLLGCKNLTFYNVGISAPEVSINTDGIHIGRSSGFN 192
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I++S + TGDDCVS+ G+GISVGSLGK N+E VVG++V+NCTFT
Sbjct: 193 ITNSTVETGDDCVSIGDGSEQINIQXVTCGPGYGISVGSLGKCPNEEPVVGISVKNCTFT 252
>gi|357114983|ref|XP_003559273.1| PREDICTED: polygalacturonase ADPG1-like [Brachypodium distachyon]
Length = 346
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 42/219 (19%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
E W+ +C + + P ++ F+ ++ T+ +K V+S+ ++++ C +++L
Sbjct: 132 ELWWKNSCKTNKARPCKQAP----TALTFHLCSNLTVENLKIVNSQQINMSVEDCSDVQL 187
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
L ITA SPNT+GIHI S ++ VI T DDC+S+ GHG
Sbjct: 188 ARLSITAPGTSPNTDGIHITRSKDVQVRDCVIKTRDDCMSIEDGTHNLRVTKVVCGPGHG 247
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG + EV G+ + GT NI+ +NV+NP
Sbjct: 248 ISIGSLGDDNSRAEVSGIYIDTVQLYGTTNGARIKTYQGGSGYAKDIVFQNIIIDNVQNP 307
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI 202
I+IDQ YC K S V+ SNV F NIRGT+ +++
Sbjct: 308 IIIDQNYCDSAKPCENQESAVEISNVVFKNIRGTTVSRV 346
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL 46
F++ ++GA DG +DD++A AW AC+ + +LVP GK YL
Sbjct: 27 FSIDNYGARGDGKRDDTEALAKAWTAACS-SSRPAVLLVPKGKTYL 71
>gi|255577475|ref|XP_002529616.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223530901|gb|EEF32761.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 474
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 55/233 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +K +++ H++ G N+K+++L +T+ +SPNT+GIH+ S+ +I+ VI TGD
Sbjct: 241 VENLKIQNAQQMHVSFQGSKNVKISNLIVTSPEESPNTDGIHVTSTQNIQITDCVIGTGD 300
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG G + V G+T+ +GT
Sbjct: 301 DCISIVSGSQNVQAMNITCGPGHGISIGSLGSGNSKAHVSGVTINGAKLSGTTNGVRIKT 360
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
NI +NV NPI+IDQ YC +K + S V+ +V + NI+GTSA
Sbjct: 361 WQGGSGNASNIKFQNIKMDNVSNPIIIDQNYCDQDKPCKEQKSAVQVKDVVYKNIKGTSA 420
Query: 200 NKI----------PCQNIGIGNINWVYNGVNVKVEGPETT-SLCSNVKPTLFG 241
+ + PC+ I + +++ + G ET +LC+NV G
Sbjct: 421 SHVAIKFDCSNSHPCEGILLQDVSL------ERQRGDETAIALCNNVDVAQVG 467
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFN 51
F+V FGA ADG DD+KAF+ AW+ AC+ G S ++VP YL IRF+
Sbjct: 108 FSVDAFGAKADG-SDDTKAFQEAWKAACSSAG--SVLVVPDNNYLIKPIRFS 156
>gi|449512834|ref|XP_004164154.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 604
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 102/220 (46%), Gaps = 53/220 (24%)
Query: 65 DSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL-- 122
D++ H+ C +K +L++ A +SPNT+GIHI + + I + VI TGDDC+S+
Sbjct: 379 DAQQMHLTFQKCTKVKALNLRVVAPGNSPNTDGIHITETQNAIIRNCVIGTGDDCISIVS 438
Query: 123 --------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT--------------- 153
GHGIS+GSLG ++ EV + V +GT
Sbjct: 439 GSRNVQAMDITCGPGHGISIGSLGADNSEAEVSNIRVNRALISGTSNGVRIKTWQGGSGY 498
Query: 154 -------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN------ 200
N+V NV NPI+IDQ YC + + S VK SNV + NIRGTSA+
Sbjct: 499 AKNIMFQNVVMRNVSNPIIIDQNYCDKKESCPEQKSAVKVSNVVYKNIRGTSASGDAIKF 558
Query: 201 ----KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
PCQ I + I V G V T+ C NV+
Sbjct: 559 DCSKSFPCQGISLLGIRIVGQGNQEAV-----TASCENVR 593
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 3/49 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
V NV DFGA +G +DD+KAFE AW+EAC+ K+ +LVP G+ ++
Sbjct: 236 VVNVDDFGAKGNG-QDDTKAFELAWKEACS--SRKATLLVPKGRTYYLK 281
>gi|356537284|ref|XP_003537159.1| PREDICTED: polygalacturonase-like [Glycine max]
Length = 436
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 51/247 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F N+ +T ++ +++ HI C N+ ++L + A +SPNT+GIH+ +
Sbjct: 189 AVTFYQCNNLKVTNLRFKNAQQMHIRFQKCNNVAASNLVVRAPGNSPNTDGIHVTETKNI 248
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
IS+S+I TGDDC+S+ GHGIS+GSLG G + +V + V T
Sbjct: 249 LISNSIIGTGDDCISIVSGSQNVRAIDIKCGPGHGISIGSLGAGDSKAQVSNVLVNRATL 308
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T T NI NV NPI++DQ YC K + S VK SN
Sbjct: 309 TRTTNGVRIKTWQGGSGYAENIIFVNIAMRNVTNPIIVDQNYCDQEKPCHEKDSAVKLSN 368
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
+ + NIRGTSA++ +PC+ I + ++ G T + C NV+
Sbjct: 369 IMYQNIRGTSASEVAIKFNCSKTVPCKGIYLQDVILTPEGHG---GCSSTIATCENVRYV 425
Query: 239 LFGKQIP 245
GK P
Sbjct: 426 NQGKVFP 432
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
NV D+GA +DD++AFE AW E C+ GI V+VP K ++
Sbjct: 67 NVDDYGAKTIDGRDDTEAFEKAWDEVCSTGGI---VVVPEEKIFHLK 110
>gi|297802788|ref|XP_002869278.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315114|gb|EFH45537.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 110/226 (48%), Gaps = 49/226 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I FN ++ G+ ++S HI+IL C N+ L++ + A DSPNT+GI I SN
Sbjct: 110 TIGFNGSSNIIYNGLTQMNSPKNHISILNCTNVTLSNFHLIAPKDSPNTDGIDIALSNNI 169
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +S I TGDDCV++ GHGIS+GSLG+G ++ V + VR+C+F
Sbjct: 170 RIFNSSIQTGDDCVAINGGSYDINITHVACGPGHGISIGSLGRGGENDTVQNVKVRHCSF 229
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYC-PYNKCNIKVPSQVKTS 187
GT NI + PI+IDQ YC + C + + VK S
Sbjct: 230 NGTKNGARIKTWTGGQGIAKNILYENITLTDANYPIIIDQHYCNGGHNCTKEATTAVKVS 289
Query: 188 NVRFNNIRGTSANKIP----------CQNIGIGNINWVYNGVNVKV 223
NV F +GT AN I CQ+I + +IN + N+ +
Sbjct: 290 NVTFRYFKGTCANNIAIKLDCDEVTGCQDIVMEHINITSSSTNMPL 335
>gi|125557642|gb|EAZ03178.1| hypothetical protein OsI_25331 [Oryza sativa Indica Group]
Length = 415
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 120/260 (46%), Gaps = 64/260 (24%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C + P ++ F ++ + +K ++S+ H+++ C +++++ L
Sbjct: 161 WQNSCKTNAKLPCTEAPT----ALTFYSCSNLKVENLKLLNSQQIHMSVEDCTDVRISSL 216
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA SPNT+GIHI S +++ +I TGDDC+S+ GHGIS+
Sbjct: 217 TITAPGTSPNTDGIHITRSKNVQVAGCIIKTGDDCMSIEDGTENLHVKNMVCGPGHGISI 276
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG ++ V +TV GT N++ NV NPI+I
Sbjct: 277 GSLGDHNSEAHVNNVTVDPVRLYGTTNGARIKTWQGGWGYAKNIVFQNMIMENVWNPIII 336
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVY 216
DQ Y C+ P + + SNV F NIRGTSA+K +PCQ I + +
Sbjct: 337 DQNY-----CDSATPCKEQVSNVVFKNIRGTSASKEAIKLDCSRNVPCQGITLKD----- 386
Query: 217 NGVNVKVEGPETTSLCSNVK 236
V +K G + S C N K
Sbjct: 387 --VTIKGGGSDAKSTCGNAK 404
>gi|255553151|ref|XP_002517618.1| polygalacturonase, putative [Ricinus communis]
gi|223543250|gb|EEF44782.1| polygalacturonase, putative [Ricinus communis]
Length = 770
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 133/301 (44%), Gaps = 68/301 (22%)
Query: 1 VFNVKDFGAVADGIKDDS---------------KAFETAWREACNWDGIKSAVLVPPGKY 45
+ +V +GAV DG DDS KA + + + I+ + +
Sbjct: 411 ITDVMQYGAVGDGEIDDSELRNPTNTGRKDILVKASQVSRSCKSSPINIQKFDEIGGRRP 470
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ F+ N+ ++G+ ++S HI+ GC N+ ++DL ITA SPNT+GI+I S+
Sbjct: 471 TALTFDQCNNLQLSGLTHINSAQDHIHFSGCSNVLVSDLHITAPESSPNTDGINISHSSN 530
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I I TGDDCV++ GHGIS+GSLGK + V + V++CT
Sbjct: 531 IQIHDCTIGTGDDCVAIGGGSSNINITGVTCGPGHGISIGSLGKNGKSDTVEEVYVKDCT 590
Query: 150 FTGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
GT I + V+NPI+IDQ YC + S VK S
Sbjct: 591 LKGTTNGLRIKTWQGGSGHARQIHFEGITLDAVDNPIIIDQYYCEHKSACKNQTSAVKVS 650
Query: 188 NVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
N+ + + GTS + C NI + +I+ + +G +T + C N
Sbjct: 651 NIFYKGVHGTSITEEAIQLRCSQSTSCSNIFLSDIDIISAN-----QGIQTHAFCFNAYG 705
Query: 238 T 238
T
Sbjct: 706 T 706
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 95/214 (44%), Gaps = 49/214 (22%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
I F + + I +V S HI + GC N++ + L + + SPNT+GIHI SN
Sbjct: 134 ISFEMCKNVNLRRISTVRSGGGHIAVFGCENVRFSILNLQSPGKSPNTDGIHISHSNFVH 193
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I SVI +GDDC+S+ GHGIS+GSLG +V +T+RN F
Sbjct: 194 IHKSVIGSGDDCISMLDRSYNVNITNINCGPGHGISIGSLGSDGTKVDVQNITIRNVNFY 253
Query: 152 GT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T NI N NPI IDQ YCP C + S VK S +
Sbjct: 254 KTTNGARIKTWQGGSGYVRNVLFENITLLNTSNPINIDQYYCPRGNC-AEQASAVKVSGI 312
Query: 190 RFNNIRGTS----------ANKIPCQNIGIGNIN 213
F +G+S + + C NI + NI+
Sbjct: 313 TFTKFKGSSFTDPAINIACSETVGCSNIVLDNID 346
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
+NV +GAV +GI DD+ AF AW + C D + ++VP GK
Sbjct: 11 YNVLSYGAVGNGIVDDTMAFMKAWNDTCK-DSRRPVMVVPMGK 52
>gi|15230328|ref|NP_191310.1| Polygalacturonase ADPG1 [Arabidopsis thaliana]
gi|75318074|sp|O23147.1|ADPG1_ARATH RecName: Full=Polygalacturonase ADPG1; Short=AtADPG1; Short=PG
ADPG1; AltName: Full=Pectinase ADPG1; AltName:
Full=Protein ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 1; Flags: Precursor
gi|2597824|emb|CAA05525.1| endo-polygalacturonase [Arabidopsis thaliana]
gi|4090973|gb|AAC98923.1| endo-polygalacturonase [Arabidopsis thaliana]
gi|6706422|emb|CAB66108.1| endo-polygalacturonase [Arabidopsis thaliana]
gi|26450946|dbj|BAC42580.1| putative endo-polygalacturonase [Arabidopsis thaliana]
gi|28951033|gb|AAO63440.1| At3g57510 [Arabidopsis thaliana]
gi|332646143|gb|AEE79664.1| Polygalacturonase ADPG1 [Arabidopsis thaliana]
Length = 431
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 123/263 (46%), Gaps = 62/263 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
+T W+ +C D K P L +N N + ++ +++ I+I C +++
Sbjct: 173 KTWWQNSCKIDKSKPCTKAPTALTL---YNLKN-LNVKNLRVKNAQQIQISIEKCNKVEV 228
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
++++ITA DSPNT+GIHI ++ +S+S I TGDDC+S+ GHG
Sbjct: 229 SNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHG 288
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG + V G+ V F+ + NI NV+NP
Sbjct: 289 ISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNP 348
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNIN 213
I+IDQ YC +KC + S V+ NV + NI GTSA K PCQ I +
Sbjct: 349 IIIDQDYCDKDKCEDQ-ESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVL---- 403
Query: 214 WVYNGVNVKVEGPETTSLCSNVK 236
NVK++G + +NVK
Sbjct: 404 -----ENVKIKGGTASCKNANVK 421
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL--SIRF 50
V +FGA DG DD++AF+ AW++AC+ +G+ + LVP GK YL S RF
Sbjct: 70 VSNFGAKGDGKTDDTQAFKKAWKKACSTNGV-TTFLVPKGKTYLLKSTRF 118
>gi|242056231|ref|XP_002457261.1| hypothetical protein SORBIDRAFT_03g004360 [Sorghum bicolor]
gi|241929236|gb|EES02381.1| hypothetical protein SORBIDRAFT_03g004360 [Sorghum bicolor]
Length = 411
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 105/218 (48%), Gaps = 52/218 (23%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ F+ ND + I+ +S H+ + C ++ + ITA ADSPNT+GI + SSN +
Sbjct: 165 LAFSLCNDLWVRNIRLKNSADKHMTLFQCNQALIDGVSITAPADSPNTDGITVASSNSTT 224
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
IS+ I +GDDCVS+ GHGISVGSLGK +V + + NC+F
Sbjct: 225 ISNCSIQSGDDCVSILSHTKNITVTHSTCGPGHGISVGSLGKS-ERAKVEQIVITNCSFV 283
Query: 152 GT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
GT ++ V+ PIVIDQ YCP C K P V S+
Sbjct: 284 GTMNGVRIKSWQGGKGYAKGFLFASLNMTEVQYPIVIDQFYCPQGNCPTK-PGGVAISDA 342
Query: 190 RFNNIRGTSANK----------IPCQNIGIGNIN--WV 215
+F +I+GTS+ + + C I + N+N WV
Sbjct: 343 KFIDIQGTSSEQEAIKLLCSQSVHCHGIYLSNVNLSWV 380
>gi|302807555|ref|XP_002985472.1| hypothetical protein SELMODRAFT_122081 [Selaginella moellendorffii]
gi|300146935|gb|EFJ13602.1| hypothetical protein SELMODRAFT_122081 [Selaginella moellendorffii]
Length = 410
Score = 103 bits (257), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 129/303 (42%), Gaps = 66/303 (21%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDS---T 57
+ V DF GI D E WR +C +++ V Y F + S T
Sbjct: 112 IARVHDFSVEGYGIIDGQG--EEWWRISCR----RNSSYVSDSSYRLYSFLTFDSSANIT 165
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I +K V+S H+ I N+ + ++I A DSPNT+GIH+ SN I +I TGD
Sbjct: 166 IQDLKFVNSPQMHLAIEESSNVSIKGVEILAPHDSPNTDGIHLHMSNNVSIEKCIIGTGD 225
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG+ E V + V N T
Sbjct: 226 DCISIAKNTSNVVIREIICGPGHGISIGSLGRNKTPEFVSNVKVENSILESTKYGLRIKT 285
Query: 154 --------------NIVTNNVENPIVIDQLYCPYN---KCNIKVPSQVKTSNVRFNNIRG 196
N+V NV PI+IDQ YC N C + VK SNV ++NI G
Sbjct: 286 WQGGQGFASNFSYYNVVMMNVLQPIIIDQYYCDGNSSFSCGTEELDAVKVSNVSYSNIMG 345
Query: 197 TSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA 246
TSA+ + PC N+ + N+ +N+ G ++ C N G +P
Sbjct: 346 TSASSVALRFQCSLGNPCYNLVLENV-----FLNLS-NGSTPSAFCLNAFGQNKGLVVPN 399
Query: 247 TCV 249
+C+
Sbjct: 400 SCL 402
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
FNV +FGA DG+ DDS+AF AW+ AC+ + + +LVP GK + + L T +
Sbjct: 28 FNVVEFGARGDGLSDDSQAFLAAWKRACHTE--NATMLVPGGKAFVVNYLLLTGPCATNL 85
Query: 62 K 62
+
Sbjct: 86 R 86
>gi|225450100|ref|XP_002274775.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 449
Score = 103 bits (257), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 126/272 (46%), Gaps = 57/272 (20%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C + + + P ++ F + + G+ +++ H+ +++ ++
Sbjct: 186 WKNSCKINKTQPCTVAP----TAVTFRRCENLRVCGLNIKNAQQMHVRFEQSVDVQAFNV 241
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
+TA DSPNT+GIH+ S +I SVI TGDDC+S+ GHGIS+
Sbjct: 242 MLTAPEDSPNTDGIHVTGSQNVQIISSVIRTGDDCISIVNGSKNVQALDVTCGPGHGISI 301
Query: 129 GSLGKG----------INDEEVVGLT--VRNCTFTG----------TNIVTNNVENPIVI 166
GSLG+G +N +++G T VR T+ G NI+ NV NPI+I
Sbjct: 302 GSLGEGNSEAFVSNVMVNKAKLIGTTNGVRIKTWQGGSGYAKNIVFQNIIMENVSNPIII 361
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YC + + S V+ V + NI+GTSA+++ PCQ I + +I+ V
Sbjct: 362 DQNYCDQDTPCEEQDSAVQIKGVVYKNIKGTSASEMAIKFNCSSTFPCQGIVLQDIDLVS 421
Query: 217 NGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
E E S C NV ++ TC
Sbjct: 422 -----YEEDREANSTCMNVMELETRGRVSPTC 448
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
NV D+GA DGI DD++AF+ AW+E C+ + ++VP KY
Sbjct: 81 NVDDYGAEGDGITDDTEAFKKAWKETCSSN--VGVLVVPEKKY 121
>gi|302796123|ref|XP_002979824.1| hypothetical protein SELMODRAFT_111266 [Selaginella moellendorffii]
gi|300152584|gb|EFJ19226.1| hypothetical protein SELMODRAFT_111266 [Selaginella moellendorffii]
Length = 410
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 129/303 (42%), Gaps = 66/303 (21%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDS---T 57
+ V DF GI D E WR +C +++ V Y F + S T
Sbjct: 112 IARVYDFSVEGYGIIDGQG--EEWWRISCR----RNSSYVSDSSYRLYSFLTFDSSANIT 165
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I +K V+S H+ I N+ + ++I A DSPNT+GIH+ SN I +I TGD
Sbjct: 166 IQDLKFVNSPQMHLAIEESSNVSIKGVEILAPHDSPNTDGIHLHMSNNVSIEKCIIGTGD 225
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG+ E V + V N T
Sbjct: 226 DCISIAKNTSNVVIREIICGPGHGISIGSLGRNKTPEFVSNVKVENSILESTKYGLRIKT 285
Query: 154 --------------NIVTNNVENPIVIDQLYCPYN---KCNIKVPSQVKTSNVRFNNIRG 196
N+V NV PI+IDQ YC N C + VK SNV ++NI G
Sbjct: 286 WQGGQGFASNFSYYNVVMMNVLQPIIIDQYYCDGNSSFSCGTEELDAVKVSNVSYSNIMG 345
Query: 197 TSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA 246
TSA+ + PC N+ + N+ +N+ G ++ C N G +P
Sbjct: 346 TSASSVALRFQCSLGNPCYNLVLENV-----FLNLS-NGSTPSAFCLNAFGQNKGLVVPN 399
Query: 247 TCV 249
+C+
Sbjct: 400 SCL 402
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
FNV +FGA DG+ DDS+AF AW+ AC+ + + +LVP GK + + L T +
Sbjct: 28 FNVVEFGARGDGLSDDSQAFLAAWKRACHTE--NATMLVPGGKAFVVNYLLLTGPCATNL 85
Query: 62 K 62
+
Sbjct: 86 R 86
>gi|297736266|emb|CBI24904.3| unnamed protein product [Vitis vinifera]
Length = 456
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 135/294 (45%), Gaps = 59/294 (20%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIK 62
N+K+F G D + + W+ +C + + + P ++ F + + G+
Sbjct: 173 NIKNFIVEGQGTIDGNG--KIWWKNSCKINKTQPCTVAP----TAVTFRRCENLRVCGLN 226
Query: 63 SVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL 122
+++ H+ +++ ++ +TA DSPNT+GIH+ S +I SVI TGDDC+S+
Sbjct: 227 IKNAQQMHVRFEQSVDVQAFNVMLTAPEDSPNTDGIHVTGSQNVQIISSVIRTGDDCISI 286
Query: 123 ----------------GHGISVGSLGKG----------INDEEVVGLT--VRNCTFTG-- 152
GHGIS+GSLG+G +N +++G T VR T+ G
Sbjct: 287 VNGSKNVQALDVTCGPGHGISIGSLGEGNSEAFVSNVMVNKAKLIGTTNGVRIKTWQGGS 346
Query: 153 --------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI-- 202
NI+ NV NPI+IDQ YC + + S V+ V + NI+GTSA+++
Sbjct: 347 GYAKNIVFQNIIMENVSNPIIIDQNYCDQDTPCEEQDSAVQIKGVVYKNIKGTSASEMAI 406
Query: 203 --------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
PCQ I + +I+ V E E S C NV ++ TC
Sbjct: 407 KFNCSSTFPCQGIVLQDIDLVS-----YEEDREANSTCMNVMELETRGRVSPTC 455
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 2/43 (4%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
NV D+GA DGI DD++AF+ AW+E C+ + ++VP KY
Sbjct: 88 NVDDYGAEGDGITDDTEAFKKAWKETCSSN--VGVLVVPEKKY 128
>gi|548488|sp|P35336.1|PGLR_ACTDE RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Pectinase;
Flags: Precursor
gi|166325|gb|AAC14453.1| polygalacturonase [Actinidia deliciosa var. deliciosa]
Length = 467
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 114/237 (48%), Gaps = 56/237 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +K +++ H++ C N++ ++L +TA +SPNT+GIH+ + IS VI TGD
Sbjct: 224 VKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGD 283
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG G ++ V + V GT
Sbjct: 284 DCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKT 343
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
N+ +NVENPI+IDQ YC +K + S V+ NV + NI+GT A
Sbjct: 344 WQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCA 403
Query: 200 N----------KIPCQNIGIGNINWVYNGVNVKVE-GPETTSLCSNVKPTLFGKQIP 245
+ + PCQ I V V++++E G +LC+NV+ + G P
Sbjct: 404 SNVAITFDCSKRFPCQGI-------VLEDVDLEIEGGAAAKALCNNVELSETGVVSP 453
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
NV DFGA DG +DD+KAFE AW+ AC+ SAVL+ P K +R
Sbjct: 91 NVDDFGAKGDG-RDDTKAFEKAWKAACS--STSSAVLLVPKKNYLVR 134
>gi|255548325|ref|XP_002515219.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223545699|gb|EEF47203.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 537
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 116/242 (47%), Gaps = 52/242 (21%)
Query: 22 ETAWREACN-WDGIKSAVLVPP-GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 79
E W C GI L P ++IRF ++ T+ GI+ +S F+ C N+
Sbjct: 248 EKWWDLPCKPHKGINGTTLPGPCDSPIAIRFFMSSNLTVQGIRIKNSPQFNFRFDNCRNV 307
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG---------------- 123
++ + ITA A SPNT+GIHI ++N EI SVI+ GDDCVS+G
Sbjct: 308 HIDSIHITAPALSPNTDGIHIENTNNVEIYDSVISNGDDCVSIGSGCYDVDIRNITCGPS 367
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCT----------------------FTGTNIVTNNVE 161
HGIS+GSLG + V +TVR+ T +NI +NV+
Sbjct: 368 HGISIGSLGNHNSRACVSNITVRDSVIKLSDNGVRIKTWQGGSGAVTGITFSNIHMDNVK 427
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT-----------SANKIPCQNIGIG 210
NPI+IDQ YC +C+ + S V S++ + NI+GT ++ +PC N+ +
Sbjct: 428 NPIIIDQFYCLTKECSNQT-SAVFVSDILYENIKGTYNIRSPPMHFACSDSVPCTNLTLS 486
Query: 211 NI 212
+
Sbjct: 487 EV 488
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
V +V+ FGA+ DGI DD+ AF+ AW AC+ + + +LVP F F+ STI
Sbjct: 141 VLDVRKFGAIGDGITDDTDAFKMAWETACSQND-TAIILVP------YTFKFMIQSTI 191
>gi|147810290|emb|CAN78059.1| hypothetical protein VITISV_006092 [Vitis vinifera]
Length = 422
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 122/260 (46%), Gaps = 62/260 (23%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
+N+K+F G D + + W+ +C + ++ + F ++ + G+
Sbjct: 177 YNIKNFQVEGQGTIDGNG--KIWWKNSCKINITQA-----------VSFVQCDNLKVYGL 223
Query: 62 KSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
D++ H++ N++ +++ +T+ +SPNT+GIH+ S +I +VI TGDDC+S
Sbjct: 224 NVQDAQQMHVSFEESMNVQASNIMVTSSEESPNTDGIHVTRSENVQIIKTVIKTGDDCIS 283
Query: 122 L----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------ 153
+ GHGIS+GSLGKG ++ V + V GT
Sbjct: 284 IVNGSTNIEAIDVTCGPGHGISIGSLGKGKSEARVSNVMVNTAKLIGTTNGGGSGYAENI 343
Query: 154 ---NIVTNNVENPIVIDQLYC----PYNKCNIKVPSQVKTSNVRFNNIRGTSANK----- 201
+I NV NPI+IDQ YC P N+ N S V+ N+ + NI GTSA K
Sbjct: 344 VFQDIKMENVSNPIIIDQNYCDQEIPCNEQN----SAVQIRNIVYKNITGTSATKMTXIF 399
Query: 202 -----IPCQNIGIGNINWVY 216
+PCQ I +IN VY
Sbjct: 400 NCSKTLPCQGIVQKDINLVY 419
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
NV DFGA DG+ DD++AF+TAW E C+ + +AVLV P
Sbjct: 92 NVDDFGAKGDGVTDDTEAFKTAWEETCSSN---TAVLVVP 128
>gi|224138026|ref|XP_002322711.1| predicted protein [Populus trichocarpa]
gi|222867341|gb|EEF04472.1| predicted protein [Populus trichocarpa]
Length = 453
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 116/247 (46%), Gaps = 54/247 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + + +K +++ H+ ++ +++L + + +SPNT+GIHI +
Sbjct: 210 AVTFFECQNLIVKDLKIQNAQQMHVTFKKSNHVLVSNLTVISPEESPNTDGIHITKTQNI 269
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+I+ SVI TGDDC+S+ GHGIS+GSLG + + V G+TV+
Sbjct: 270 QITDSVIGTGDDCISIVSGSHNVQATGITCGPGHGISIGSLGAHDSKDHVSGVTVKGAKL 329
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
+GT NI N V NPI+IDQ YC +K + S ++ N
Sbjct: 330 SGTANGVRIKTWQGGSGNVSNIKFQNIEMNKVTNPIIIDQNYCDQDKPCKQQKSALQVKN 389
Query: 189 VRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V + NI+GTSA+++ PCQ I + +IN G +LC+NVK
Sbjct: 390 VMYKNIKGTSASEVAMRFDCSKAYPCQGILLQDINLERAGDRT------AKALCNNVKLA 443
Query: 239 LFGKQIP 245
G P
Sbjct: 444 TLGVVYP 450
>gi|297743438|emb|CBI36305.3| unnamed protein product [Vitis vinifera]
Length = 372
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 148/366 (40%), Gaps = 131/366 (35%)
Query: 6 DFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP-------PGKYLS----------- 47
D+GAV DG DDS+AF AW E C + + +P P K+
Sbjct: 2 DYGAVGDGKTDDSQAFLKAWNETCKAQSPDATMNIPAKTFLVNPAKFWGPCVPTRINIQV 61
Query: 48 ------------------IRFNFLNDSTITGIKSVDSR------------YFHI------ 71
+ F +L T+TG ++D + +H+
Sbjct: 62 AGQIIANTDQSLYSNNYWLHFAYLGGLTLTGSGTIDGQGAGSWPERKGVAIWHVLGQALQ 121
Query: 72 ----------------------NILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
++ GC + +N++ I+A DSPNT+GI IG S+ +I
Sbjct: 122 LFSITDLEINGLTHTNPQKAHISMTGCNGVNINNITISAPEDSPNTDGIDIGDSSHIQIQ 181
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGIND--EEVVGLTVRNCTFT 151
+S I TGDDC+++ GHGIS+GSLG ++ + V + VR+C F
Sbjct: 182 NSKIGTGDDCIAIGTNCSFINITDVTCGPGHGISIGSLGNPVDGGYDTVSEIHVRSCDFI 241
Query: 152 GTN-----------------------IVTNNVENPIVIDQLYCPYNKC-NIKVPSQVKTS 187
G N I ++ PIVIDQ YCP N C N S V S
Sbjct: 242 GKNTTGVRIKTWQGGHGEVKNITYEYIKFYDIARPIVIDQFYCPNNACQNNTGTSAVAIS 301
Query: 188 NVRFNNIRGTSANKIPCQNIGIGNINWVYNGV--NVKVEGPETTS-----------LCSN 234
+V + N+ GTS+ P ++ G+ N N V NV ++ ++T + S+
Sbjct: 302 DVSYTNMGGTSSGDDPAISLRCGDKNSCNNIVLDNVHIKNSDSTKPASADCLNVKGISSH 361
Query: 235 VKPTLF 240
VKP+L
Sbjct: 362 VKPSLL 367
>gi|297736265|emb|CBI24903.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 123/267 (46%), Gaps = 62/267 (23%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
+N+K+F G D + + W+ +C + + P ++ F ++ + G+
Sbjct: 174 YNIKNFQVEGQGTIDGNG--KIWWKNSCKINITQPCTNAP----TAVSFVQCDNLKVYGL 227
Query: 62 KSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
D++ H++ N++ +++ +T+ +SPNT+GIH+ S +I +VI TGDDC+S
Sbjct: 228 NVQDAQQMHVSFEESMNVQASNIMVTSSEESPNTDGIHVTRSENVQIIKTVIKTGDDCIS 287
Query: 122 L----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------ 153
+ GHGIS+GSLGKG ++ V + V GT
Sbjct: 288 IVNGSTNIEAIDVTCGPGHGISIGSLGKGKSEARVSNVMVNTAKLIGTTNGVRIKTWQGG 347
Query: 154 ----------NIVTNNVENPIVIDQLYC----PYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
+I NV NPI+IDQ YC P N+ N S V+ N+ + NI GTSA
Sbjct: 348 SGYAENIVFQDIKMENVSNPIIIDQNYCDQETPCNEQN----SAVQIRNIVYKNITGTSA 403
Query: 200 NK----------IPCQNIGIGNINWVY 216
K +PCQ I +IN VY
Sbjct: 404 TKMTIIFNCSKTLPCQGIVQKDINLVY 430
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
NV DFGA DG+ DD++AF+TAW E C+ + +AVLV P
Sbjct: 89 NVDDFGAKGDGVTDDTEAFKTAWEETCSSN---TAVLVVP 125
>gi|297842853|ref|XP_002889308.1| hypothetical protein ARALYDRAFT_316947 [Arabidopsis lyrata subsp.
lyrata]
gi|297335149|gb|EFH65567.1| hypothetical protein ARALYDRAFT_316947 [Arabidopsis lyrata subsp.
lyrata]
Length = 374
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 123/252 (48%), Gaps = 57/252 (22%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ F+ + T+ ++ +S H+ ++G N+ +ND+K+T+ SPNT+GIHI SS
Sbjct: 130 MTFSNCGNVTLKSLRFRNSAQTHVLVMGSQNVYINDIKVTSPEASPNTDGIHITSSTVVS 189
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+HS IATGDDCVS+ GHG S+GSLG+G + V + V + FT
Sbjct: 190 INHSDIATGDDCVSIGDQVNNLNVTFMNCGPGHGDSIGSLGRGGTEVAVENIRVWHVNFT 249
Query: 152 GT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
GT +I ++V+NPI+IDQ Y KC ++ V V
Sbjct: 250 GTTNGARIKTWPGGTGYVRGIEFFDIHFSSVQNPIIIDQFYGCAPKC-VETRKGVHIEKV 308
Query: 190 RFNNIRGTSANK-----------IPCQNIGIGNINWV-YNGVNVKVEGPETTSLCSNVKP 237
R+ + GTSA K +PC N+ + +I+ +G+ +SLCS V
Sbjct: 309 RYMKMSGTSATKVAMKLECSGESVPCSNLLMRDIDLSPADGIG------SVSSLCSFVHG 362
Query: 238 TLFGKQIPATCV 249
+ G P++C+
Sbjct: 363 SAQGLIRPSSCL 374
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+GAV DGI DD+ AF+ AW +AC +V VP GK LN TG
Sbjct: 3 YGAVGDGIADDTSAFQKAWEDACKGSSKMGSVNVPAGKVF-----LLNSLHFTG 51
>gi|30688821|ref|NP_850359.1| Polygalacturonase ADPG2 [Arabidopsis thaliana]
gi|226711460|sp|Q8RY29.2|ADPG2_ARATH RecName: Full=Polygalacturonase ADPG2; Short=AtADPG2; Short=PG
ADPG2; AltName: Full=Pectinase ADPG2; AltName:
Full=Protein ARABIDOPSIS DEHISCENCE ZONE
POLYGALACTURONASE 2; Flags: Precursor
gi|330254946|gb|AEC10040.1| Polygalacturonase ADPG2 [Arabidopsis thaliana]
Length = 433
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 117/242 (48%), Gaps = 57/242 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDST--ITGIKSVDSRYFHINILGCYNL 79
ET W+ +C + K P F N + + +K +++ I+I C N+
Sbjct: 173 ETWWQNSCKRNKAKPCTKAPTA------LTFYNSKSLIVKNLKVRNAQQIQISIEKCSNV 226
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------G 123
+++++ +TA ADSPNT+GIHI ++ +S S+I TGDDC+S+ G
Sbjct: 227 QVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPG 286
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVE 161
HGIS+GSLG + V G+TV +GT NI +NV+
Sbjct: 287 HGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVK 346
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
NPI+IDQ YC +KC + S V+ NV + +I GTSA++ PCQ I +
Sbjct: 347 NPIIIDQDYCDKSKCTTE-KSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDR 405
Query: 212 IN 213
+N
Sbjct: 406 VN 407
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+V DFGA DG DD++AF AW++AC+ +G + +LVP G
Sbjct: 69 SVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVN-LLVPKG 108
>gi|449461705|ref|XP_004148582.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 483
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF ++ + G++ DS FH C ++ ++ L IT+ A SPNT+GIHI ++NG
Sbjct: 220 IAIRFFMSSELRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNG 279
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
+I +S++A GDDCVS+ GHGIS+GSLG + V +TVR+
Sbjct: 280 VQIFNSIVANGDDCVSIGSGSFNVEIRNITCGPGHGISIGSLGNHNSRACVSNITVRDSI 339
Query: 149 -----------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T+ G NI +NV NPI+IDQ YC NK + S V S
Sbjct: 340 IKVSDNGVRIKTWQGGFGTVRGVSFNNINMDNVRNPIIIDQFYC-LNKGCLNQTSAVVVS 398
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
++ + +I+GT ++ +PC N+ + NI
Sbjct: 399 DISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANI 434
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 11/62 (17%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKS-----AVLVPPGKYLSIRFNFLNDS 56
F+V+ FGA+ DG DD+ AF+ AW AC + + +LVP G F+F+ S
Sbjct: 85 FDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDNNDDYGVILVPYG------FSFMIQS 138
Query: 57 TI 58
TI
Sbjct: 139 TI 140
>gi|449511515|ref|XP_004163976.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 483
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 110/216 (50%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF ++ + G++ DS FH C ++ ++ L IT+ A SPNT+GIHI ++NG
Sbjct: 220 IAIRFFMSSELRVEGVRIKDSPQFHFRFDNCKDVYIDSLHITSPALSPNTDGIHIENTNG 279
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
+I +S++A GDDCVS+ GHGIS+GSLG + V +TVR+
Sbjct: 280 VQIFNSIVANGDDCVSIGSGSFNVEIRNITCGPGHGISIGSLGNHNSRACVSNITVRDSI 339
Query: 149 -----------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T+ G NI +NV NPI+IDQ YC NK + S V S
Sbjct: 340 IKVSDNGVRIKTWQGGFGTVRGVSFNNINMDNVRNPIIIDQFYC-LNKGCLNQTSAVVVS 398
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
++ + +I+GT ++ +PC N+ + NI
Sbjct: 399 DISYIDIKGTYDIRSPPMHFGCSDSMPCMNLTLANI 434
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 11/62 (17%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKS-----AVLVPPGKYLSIRFNFLNDS 56
F+V+ FGA+ DG DD+ AF+ AW AC + + +LVP G F+F+ S
Sbjct: 85 FDVRHFGAIGDGTADDTAAFKMAWDTACQRNDDDNNDDYGVILVPYG------FSFMIQS 138
Query: 57 TI 58
TI
Sbjct: 139 TI 140
>gi|449436389|ref|XP_004135975.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449488764|ref|XP_004158164.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 467
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 106/216 (49%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF ++ T+ G+K +S FH GC + ++ + I + SPNT+GIHI ++NG
Sbjct: 203 IAIRFFMSSNLTVHGLKITNSPQFHFRFDGCKTVHIDSIHIKSPGLSPNTDGIHIENTNG 262
Query: 106 SEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT 149
+I +SVI GDDCVS+G HGIS+GSLG + V +TVR+
Sbjct: 263 VQIYNSVINNGDDCVSIGSGSYDLDIRNITCGPSHGISIGSLGVRNSRACVTNITVRDSV 322
Query: 150 ----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +NI +NV NPI+IDQ YC C + S V S
Sbjct: 323 IKDSDNGVRIKTWQGGYGAVRGITFSNIHMDNVRNPIIIDQFYCLTKDCTNQT-SAVSVS 381
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
++++ NI+GT ++ +PC N+ + I
Sbjct: 382 DIQYTNIKGTYDIRSPPMHFACSDSVPCTNLTLSEI 417
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
+F+V+ FGA+ DGI DD++AF+ AW AC + +LVP G F+F+ STI
Sbjct: 69 IFDVRAFGAIGDGIVDDTEAFKMAWDTACQSEDDSVVMLVPYG------FSFMIQSTI 120
>gi|356557253|ref|XP_003546932.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max]
Length = 443
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 117/252 (46%), Gaps = 56/252 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F+ D + + ++S+ H++ C + + LK+ A A SPNT+GIHI ++ G
Sbjct: 177 AMTFHRCKDLKVRNLMLINSQRMHLSFTNCMRIVASHLKVLAPAFSPNTDGIHISATKGV 236
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT------ 144
E+ SVI TGDDC+S+ GHGIS+GSLGK E+V +
Sbjct: 237 EVRDSVIRTGDDCISIVRNSSRVWIRNISCGPGHGISIGSLGKSKKWEKVQNVIVDGVYL 296
Query: 145 ------VRNCTFTG----------TNIVTNNVENPIVIDQLYC-PYNKCNIKVPSQVKTS 187
VR T+ G +I+ NV NPI++DQ YC N C + S V+
Sbjct: 297 YNTDNGVRIKTWQGGSGFASKITFQHILMENVSNPIIVDQYYCDSRNPCKNET-SAVRVE 355
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
N+ F +I+GTSA + PC+ + + NI G T+S C
Sbjct: 356 NISFIDIQGTSATEEAIKFSCSDAFPCEGLYLENI------FLASCFGGNTSSFCWQAHG 409
Query: 238 TLFGKQIPATCV 249
+ G P+TC+
Sbjct: 410 SARGFLHPSTCL 421
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
V +V D+GA DG+ +D++AF AW+ AC+ G S V P GK
Sbjct: 50 VLSVGDYGAKGDGLHNDTEAFLEAWKIACSLSGFISVVF-PYGK 92
>gi|296084985|emb|CBI28400.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 84/161 (52%), Gaps = 47/161 (29%)
Query: 100 IGSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGL 143
+G S G IS ++I TGDD +S+G HGISVGSLGK N+E VVG+
Sbjct: 1 MGRSTGVNISDAIIKTGDDSLSIGDGSQHINVEKVTCGPGHGISVGSLGKYHNEEPVVGV 60
Query: 144 TVRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKV 180
TV+NCT T +I+ NNV NPI+I+Q YCPY++C KV
Sbjct: 61 TVKNCTLINTMNGIRVKTWPDSPASVATDLHFEDIIMNNVGNPILINQEYCPYDQCQAKV 120
Query: 181 PSQVKTSNVRFNNIRGTSANK--------IPCQNIGIGNIN 213
PSQVK S+V F I S + +PCQ + I +IN
Sbjct: 121 PSQVKISDVSFQGICSMSGTQVAVVCSRGVPCQTVDISDIN 161
>gi|297743440|emb|CBI36307.3| unnamed protein product [Vitis vinifera]
Length = 404
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 111/236 (47%), Gaps = 44/236 (18%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++ F N+ + G+ ++S+ HI++ G + ++ L ITA SPNT+GI I S
Sbjct: 157 IAMGFYSCNNLLLQGLNFINSQRNHISVSGSNGVTISHLTITAPDSSPNTDGIDISHSKN 216
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+S S I TGDDC++ GHGIS+GSLG G +V + V +C+
Sbjct: 217 VRVSDSTIGTGDDCIAFGDQTSQVFVKGVACGPGHGISIGSLGVGGASAQVEEIHVDSCS 276
Query: 150 FTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
F GT NI + ENPI+IDQ YCP++ C S V+ S
Sbjct: 277 FKGTQNGARIKTWQGGSGYARKITFNNIKLEDAENPIIIDQYYCPHSVCQTTT-SAVQIS 335
Query: 188 NVRFNNIRGTSAN----KIPC-QNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
+V F GTSA K+ C + +G NI+ Y + + T S C N T
Sbjct: 336 DVSFTGFLGTSATDNAIKLSCSETVGCTNISLDYINIKLASGNGNTYSSCINAHGT 391
>gi|15220066|ref|NP_178131.1| pectin lyase-like protein [Arabidopsis thaliana]
gi|332198241|gb|AEE36362.1| pectin lyase-like protein [Arabidopsis thaliana]
Length = 336
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 59/257 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
PG ++ F+ + T+ ++ +S H+ ++G N+ ++D+KIT+ SPNT+GIHI
Sbjct: 88 PGPMMT--FSNCGNVTLKSLRFRNSAQTHVLVMGSQNVYIDDIKITSPEASPNTDGIHIT 145
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS I+HS IATGDDCVS+ GHG+S+GSLG+G + V + V
Sbjct: 146 SSTAVSINHSDIATGDDCVSIGDQVNNLNVTFMNCGPGHGVSIGSLGRGGTEVTVENIRV 205
Query: 146 RNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ 183
+ FTGT +I ++V+NPI+IDQ Y C ++
Sbjct: 206 SHVNFTGTTNGARIKTWPGGTGYVRGIEFFDIRFSSVQNPIIIDQFYGCAPTC-VETMKG 264
Query: 184 VKTSNVRFNNIRGTSANK-----------IPCQNIGIGNINWV-YNGVNVKVEGPETTSL 231
V VR+ + GTSA K +PC N+ + +I+ +G++ +SL
Sbjct: 265 VHIEKVRYMKMSGTSATKVAMKLECSGESVPCSNLFMRDIDLSPADGID------SVSSL 318
Query: 232 CSNVKPTLFGKQIPATC 248
CS + G P +C
Sbjct: 319 CSFAHGSAQGIIRPLSC 335
>gi|5902387|gb|AAD55489.1|AC009322_29 Similar to polygalacturonases [Arabidopsis thaliana]
Length = 459
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 110/234 (47%), Gaps = 63/234 (26%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++ F+ + + + +DS+ HI + C + ++ LK+ A A SPNT+GIHI
Sbjct: 175 GAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISV 234
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S G I ++ ++TGDDC+S+ GHGIS+GSLGK + EEV +TV
Sbjct: 235 SRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDITVD 294
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCP-----YNKCNIK 179
+ T NI NNV NPI+IDQ YC N+ NI+
Sbjct: 295 TAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQLNIE 354
Query: 180 VPSQVKTS----------NVRFNNIRGTSANK----------IPCQNIGIGNIN 213
KT N+ F ++RGTSA+K PC+NI + +I+
Sbjct: 355 PEKLSKTQKLQTSAISIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDID 408
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
+ +V +FGA +G+ DD+KAF AW+ AC+ +K+ +LVP
Sbjct: 52 LLHVGNFGAKGNGVTDDTKAFADAWKTACS-SKVKTRILVP 91
>gi|297820550|ref|XP_002878158.1| endo-polygalacturonase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297323996|gb|EFH54417.1| endo-polygalacturonase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 113/237 (47%), Gaps = 53/237 (22%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C D K P L +N L + + ++ +++ I+I C ++++++
Sbjct: 176 WQNSCKIDKSKPCTKAPTALTL---YN-LKNLNVKNLRVRNAQQIQISIEKCNKVEVSNV 231
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA DSPNT+GIHI ++ +S+S I TGDDC+S+ GHGIS+
Sbjct: 232 VITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHGISI 291
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + V G+ V F+ + NI NV+NPI+I
Sbjct: 292 GSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNPIII 351
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNIN 213
DQ YC +KC + S V+ NV + NI GTSA K PCQ I + N+N
Sbjct: 352 DQNYCDKDKCE-EQGSAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVLENVN 407
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL--SIRF 50
V +FGA DG DD++AF+ AW++AC+ +G+ + L+P GK YL S RF
Sbjct: 70 VSNFGAKGDGKTDDTQAFKKAWKKACSTNGV-TTFLIPKGKTYLLKSTRF 118
>gi|224128211|ref|XP_002320271.1| predicted protein [Populus trichocarpa]
gi|222861044|gb|EEE98586.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 54/262 (20%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACN-WDGIKSAVLVPP-GKYLSIRFNFLNDSTIT 59
+ + + + G+ D E W C GI + P ++IRF ++ T+
Sbjct: 131 YRINEMSLLGGGVIDGRG--EKWWDLPCKPHKGINGTTMPGPCDSPIAIRFFMSSNLTVQ 188
Query: 60 GIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDC 119
G+K +S F+ C N+ + + ITA A SPNT+GIHI ++NG EI +SVI+ GDDC
Sbjct: 189 GLKIKNSPQFNFRFDNCKNVHVESIHITAPALSPNTDGIHIENTNGVEIYNSVISNGDDC 248
Query: 120 VSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT-------------- 149
VS+G HGIS+GSLG + V +TVR+
Sbjct: 249 VSIGSGCYDVDIRNITCGPSHGISIGSLGNHNSRACVSNITVRDSVIRVSDNGVRIKTWQ 308
Query: 150 --------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT---- 197
T +NI +NV NPI+IDQ YC C + S + S++ + NI+GT
Sbjct: 309 GGSGAVSGITFSNIHMDNVRNPIIIDQFYCLSKGCTNQT-SALSVSDILYENIKGTYNIR 367
Query: 198 -------SANKIPCQNIGIGNI 212
++ +PC N+ + ++
Sbjct: 368 SPPMHFACSDSVPCTNLTLSDV 389
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
VF+V+ FGA+ DGI DD+ AF+ AW ACN D + +LVP G F F+ STI
Sbjct: 42 VFDVRSFGAIGDGITDDTDAFKMAWDAACNQDD-SAVILVPYG------FEFMIQSTI 92
>gi|1419408|emb|CAA90272.1| Polygalacturonase [Brassica napus]
Length = 433
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 101/197 (51%), Gaps = 49/197 (24%)
Query: 65 DSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL-- 122
+++ I+I C ++ + ++KITA DSPNT+GIHI ++ IS+S I TGDDC+S+
Sbjct: 214 NAQQIQISIEKCNSVDVKNVKITAPGDSPNTDGIHIVATKNIRISNSDIGTGDDCISIED 273
Query: 123 --------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT--------------- 153
GHGIS+GSLG + V G+ V T + T
Sbjct: 274 GSQNVQINDLTCGPGHGISIGSLGDDNSKAYVSGINVDGATLSETDNGVRIKTYQGGSGT 333
Query: 154 -------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN------ 200
NI +NV+NPI+IDQ YC +KC + S V+ +NV + NI+GTSA
Sbjct: 334 AKNIKFQNIRMDNVKNPIIIDQNYCDKDKCE-QQESAVQVNNVVYRNIQGTSATDVAIMF 392
Query: 201 ----KIPCQNIGIGNIN 213
K PCQ I + N+N
Sbjct: 393 NCSVKYPCQGIVLENVN 409
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%), Gaps = 4/50 (8%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL--SIRF 50
V +FGA DG DD++AF+ AW++AC+ +G+ + L+P GK YL SIRF
Sbjct: 71 VSNFGAKGDGKTDDTQAFKKAWKKACSTNGV-TTFLIPKGKTYLLKSIRF 119
>gi|224127770|ref|XP_002329173.1| predicted protein [Populus trichocarpa]
gi|222870954|gb|EEF08085.1| predicted protein [Populus trichocarpa]
Length = 153
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/160 (39%), Positives = 84/160 (52%), Gaps = 40/160 (25%)
Query: 122 LGHGISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTN 158
+G G VGSLGK N++ V G+ V+NCT + T +IV N
Sbjct: 1 MGQG--VGSLGKYPNEKPVSGIFVKNCTISDTTNGVRIKSWPALYGGVASNMHFEDIVMN 58
Query: 159 NVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIG 208
NV+NP++IDQ YCP+N+C +K PS+VK S+V F +IRGTSA + PCQ +
Sbjct: 59 NVQNPVIIDQGYCPWNQCTLKAPSKVKISDVSFKSIRGTSATPVVVRIACSSGFPCQKVK 118
Query: 209 IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
+ NIN Y G G S CSNVKP + G + C
Sbjct: 119 LANINLAYRG-----PGGPAKSQCSNVKPIISGIMSASGC 153
>gi|55296785|dbj|BAD68111.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 457
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 132/336 (39%), Gaps = 126/336 (37%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL---SIRFN------ 51
++NV DF A DG DD+KAF AW E CN +G +++P G+ I+FN
Sbjct: 93 LYNVLDFNATGDGNTDDTKAFLAAWEETCNNEGWP-ILIIPGGRTFLLKQIKFNGSCKSP 151
Query: 52 ---------------------------FLNDSTITGIKSVDS----------------RY 68
+N+ T+ G +D R
Sbjct: 152 IKIQMDGNIVAPNYIWASEADNLITFYSVNNLTLDGNGQIDGKGAIWWTCYTEKKCVYRP 211
Query: 69 FHINILGCYNLKLNDLKITAHAD-----------------------SPNTEGIHIGSSNG 105
+ C NL + ++ +T AD SPNT+GI + S+
Sbjct: 212 VILAFAACNNLSVTNIHLTNSADKHMTVYRCSQVHVHNVTIVAPGDSPNTDGITMAISDH 271
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
IS+ I +GDDCVS+ GHGISVGSLG+ V +TV NC
Sbjct: 272 VYISNCSIQSGDDCVSMLSYTTDVNITDITCGPGHGISVGSLGR-FETALVERITVSNCN 330
Query: 150 FTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
F GT NI VE+PI+IDQ YCP C +K V S
Sbjct: 331 FIGTKNGVRIKSWQGGMGQATGFIFENINMTAVESPIIIDQFYCPQGNCPLK-DGGVAIS 389
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNIN 213
+ RF NIRGTS+ + + CQ I + NIN
Sbjct: 390 DARFINIRGTSSEQEAIKILCSQSVHCQGIYLSNIN 425
>gi|297829364|ref|XP_002882564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328404|gb|EFH58823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 439
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 118/251 (47%), Gaps = 53/251 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++ F N+ ++ I+ +++ H+ C N+K +L +T+ ADSPNT+GIH+
Sbjct: 191 GAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVTG 250
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
+ I S++ TGDDC+S+ GHGIS+GSLG+ ++ V + V
Sbjct: 251 TQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVN 310
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
T GT +I+ NV NPI+I+Q YC + + S V
Sbjct: 311 KATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVESCPEQKSAV 370
Query: 185 KTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+ SNV + NI+GTS+ IPC+ I + N+ V + + +T+ CSN
Sbjct: 371 QVSNVLYKNIQGTSSRPIAVKFVCSKSIPCRGISMQNVKLVD-----QTQQDVSTASCSN 425
Query: 235 VKPTLFGKQIP 245
VK G P
Sbjct: 426 VKLDTRGNVSP 436
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
FNV FGA A+G DDSKAF AW AC+ GI V+VP
Sbjct: 71 FNVNTFGAKANG-NDDSKAFMKAWEAACSSTGI-VYVVVP 108
>gi|15237927|ref|NP_197222.1| polygalacturonase [Arabidopsis thaliana]
gi|10177065|dbj|BAB10507.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332005012|gb|AED92395.1| polygalacturonase [Arabidopsis thaliana]
Length = 421
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 152/385 (39%), Gaps = 151/385 (39%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK------------------ 44
+V FGA+ DG DD+KAF AW C G +LVP GK
Sbjct: 40 SVTSFGAIGDGKTDDTKAFLKAWEAVCK-GGHNRKILVPQGKTFMLKPLTFIGPCKSSTI 98
Query: 45 YLSIR--------------------FNFLNDSTITGIKSVDSR---------------YF 69
LSIR F+ +N +TG ++D R +F
Sbjct: 99 SLSIRGNLVAPGYTWYAGRYTTWISFDSINGLVVTGGGTIDGRGSLWWGNVNNRPCAMHF 158
Query: 70 -------------------HINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISH 110
H+ + N+++ L++TA DSPNT+GI I + G I
Sbjct: 159 NNCNGLRISNLRHLNSPRNHVGLSCSQNIEVRGLRMTAPGDSPNTDGIDISNCIGVHIHD 218
Query: 111 SVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT- 153
SVIATGDDC+++ GHGISVGSLG + E V + V+NCTFT T
Sbjct: 219 SVIATGDDCIAINSGSSHINITGIFCGPGHGISVGSLGVTGDFETVEEVRVKNCTFTKTQ 278
Query: 154 -----------------------NIVTNNVENPIVIDQLY-------------CPYNKCN 177
N+V + ENPI+IDQ Y Y C+
Sbjct: 279 NGVRIKTYQNGSGYARKISFEDINMVAS--ENPIIIDQTYHNGGTNGGISKSSSSYQNCH 336
Query: 178 I----KVPS----QVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGV 219
+ + PS VK ++VR+ IRG+SA+ + C +I + N+N V
Sbjct: 337 LTAKQRTPSGNGKGVKVTDVRYARIRGSSASDQDITLNCDADLGCSDIVMDNVNMVS--- 393
Query: 220 NVKVEGPETTSLCSNVKPTLFGKQI 244
G + S C N +LF ++
Sbjct: 394 --ATFGHKLFSSCKNAHGSLFASKV 416
>gi|194690040|gb|ACF79104.1| unknown [Zea mays]
Length = 496
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 48/223 (21%)
Query: 38 VLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEG 97
+L+P K ++RF ++ T+ GI V+S H+ C + ++DL +++ DSPNT+G
Sbjct: 221 MLLPRTKPTALRFYGSSNVTVAGITIVNSSQCHLKFDSCEGVMVHDLSVSSPEDSPNTDG 280
Query: 98 IHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV 141
IH+ +S G +I H+ +A GDDC+S+ GHGIS+G LG+ V
Sbjct: 281 IHLQNSRGVDIHHATLACGDDCISIQTGCSDVNIHSVNCGPGHGISIGGLGRFNTKACVS 340
Query: 142 GLTVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIK 179
+TVR+ T TG +NI V+ PI+IDQ YC C +
Sbjct: 341 NVTVRDVKMFRTTTGVRIKTWQGGSGLVQGVRFSNIQVTEVQTPIMIDQFYCDRATCRNQ 400
Query: 180 VPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S V++ ++RGT ++ PC I + I
Sbjct: 401 T-SAVAVSGVQYEDVRGTFTVRPAHLACSDSSPCSGITLAGIQ 442
>gi|224090225|ref|XP_002308956.1| predicted protein [Populus trichocarpa]
gi|222854932|gb|EEE92479.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 126/266 (47%), Gaps = 60/266 (22%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W+ +C D P +I F + + +K +++ H++ +++++L
Sbjct: 182 WQNSCKVDKNLPCKDAP----TAITFYECQNLVVKNLKIQNAQQMHVSFEKSNGVQVSNL 237
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
+T+ SPNT+GIH+ + +I+ SVI TGDDC+S+ GHGIS+
Sbjct: 238 TVTSPEGSPNTDGIHVAGTQNIQITDSVIGTGDDCISIVSGSQNVQASDITCGPGHGISI 297
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG +++ V G+TV F+GT NI NNV NPI+I
Sbjct: 298 GSLGVHNSEDYVSGVTVNGAKFSGTTNGVRIKTWQGGSGSARNIEFLNIEMNNVTNPIII 357
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVY 216
DQ YC ++ + S V+ NV + NI+GT A+++ PC+ I +
Sbjct: 358 DQNYCDQDEPCEEQRSAVQVKNVVYKNIKGTGASEVAIKFDCSKTYPCEGI-------LM 410
Query: 217 NGVNVKVEGPETT-SLCSNVKPTLFG 241
+ VN++ EG T + C+NVK G
Sbjct: 411 HDVNLEREGAGTAIASCNNVKLAELG 436
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
NVKDFGA A G DD++ E AW+EAC+ + A++V P
Sbjct: 78 NVKDFGAKAVG-GDDTETIEKAWKEACS--SSEGAIVVVP 114
>gi|147765590|emb|CAN62657.1| hypothetical protein VITISV_039093 [Vitis vinifera]
Length = 317
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 124/309 (40%), Gaps = 111/309 (35%)
Query: 6 DFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP-------PGKYLS----------- 47
D+GAV DG DDS+AF AW E C + + +P P K+
Sbjct: 2 DYGAVGDGKTDDSQAFLKAWNETCKAQSPDATMNIPAKTFLVNPAKFWGPCVPTRINIQV 61
Query: 48 ------------------IRFNFLNDSTITGIKSVDS----------------------- 66
+ F +L T+TG ++D
Sbjct: 62 AGQIIANTDQSLYSNNYWLHFAYLGGLTLTGSGTIDGQGAGSWPERKGVAALQLFSITDL 121
Query: 67 ----------RYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG 116
+ HI++ GC + +N++ I+A DSPNT+GI IG S+ +I +S I TG
Sbjct: 122 EINGLTHTNPQKAHISMTGCNGVNINNITISAPEDSPNTDGIDIGDSSHIQIQNSKIGTG 181
Query: 117 DDCVSL----------------GHGISVGSLGKGIND--EEVVGLTVRNCTFTGTN---- 154
DDC+++ GHGIS+GSLG ++ + V + VR+C F G N
Sbjct: 182 DDCIAIGTNCSFINITDVTCGPGHGISIGSLGNPVDGGYDTVSEIHVRSCDFIGKNTTGV 241
Query: 155 -------------------IVTNNVENPIVIDQLYCPYNKC-NIKVPSQVKTSNVRFNNI 194
I ++ PIVIDQ YCP N C N S V S+V + N+
Sbjct: 242 RIKTWQGGHGEVKNITYEYIKFYDIARPIVIDQFYCPNNACQNNTGTSAVAISDVSYTNM 301
Query: 195 RGTSANKIP 203
GT + P
Sbjct: 302 GGTFKWRRP 310
>gi|226500736|ref|NP_001141617.1| hypothetical protein [Zea mays]
gi|194705292|gb|ACF86730.1| unknown [Zea mays]
gi|413948585|gb|AFW81234.1| hypothetical protein ZEAMMB73_645258 [Zea mays]
Length = 537
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 48/223 (21%)
Query: 38 VLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEG 97
+L+P K ++RF ++ T+ GI V+S H+ C + ++DL +++ DSPNT+G
Sbjct: 262 MLLPRTKPTALRFYGSSNVTVAGITIVNSSQCHLKFDSCEGVMVHDLSVSSPEDSPNTDG 321
Query: 98 IHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV 141
IH+ +S G +I H+ +A GDDC+S+ GHGIS+G LG+ V
Sbjct: 322 IHLQNSRGVDIHHATLACGDDCISIQTGCSDVNIHSVNCGPGHGISIGGLGRFNTKACVS 381
Query: 142 GLTVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIK 179
+TVR+ T TG +NI V+ PI+IDQ YC C +
Sbjct: 382 NVTVRDVKMFRTTTGVRIKTWQGGSGLVQGVRFSNIQVTEVQTPIMIDQFYCDRATCRNQ 441
Query: 180 VPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S V++ ++RGT ++ PC I + I
Sbjct: 442 T-SAVAVSGVQYEDVRGTFTVRPAHLACSDSSPCSGITLAGIQ 483
>gi|449479923|ref|XP_004155747.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 392
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W+ S P G ++ + + + G+ S++S+ F+I + GC N+++ + +++
Sbjct: 132 WNCKHSGKSCPDGA-TNLEISHAQNVHVNGLSSINSQMFNIVVYGCENVQIQGVNVSSAG 190
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
DSPNT+GIH+ S IS + I TGDDC+S+ GHGIS+GSLG+
Sbjct: 191 DSPNTDGIHVQQSLNVNISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGSLGRQ 250
Query: 135 INDEEVV--------------GLTVRNCTFTGTNIVTN---------NVENPIVIDQLYC 171
+ + V G+ +++ T NV NPI+IDQ YC
Sbjct: 251 VEEAGVENVTVTTATFTGTQNGVRIKSWGRPSNAFATKILFQHIRFYNVNNPILIDQNYC 310
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P N+ S VK S+V + ++ GTSA+++ PC I + +I YN
Sbjct: 311 PNNQGCPGQASGVKVSDVTYQDVNGTSASEVAINFDCSPTNPCTGITLEDIQLTYNNQIP 370
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
K C N + T G P +C+
Sbjct: 371 KAS-------CKNARGTASGPLQPRSCL 391
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
FN+ GA+ADG D S AF+ AW AC + + VP G + NF
Sbjct: 27 FNIVSLGAIADGKTDASHAFQEAWANACG-SSEPATIYVPNGAFYIQSGNF 76
>gi|359487296|ref|XP_003633562.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 481
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 129/286 (45%), Gaps = 67/286 (23%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
+N+K+F G D + + W+ +C + + P ++ F ++ + G+
Sbjct: 193 YNIKNFQVEGQGTIDGNG--KIWWKNSCKINITQPCTNAP----TAVSFVQCDNLKVYGL 246
Query: 62 KSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
D++ H++ N++ +++ +T+ +SPNT+GIH+ S +I +VI TGDDC+S
Sbjct: 247 NVQDAQQMHVSFEESMNVQASNIMVTSSEESPNTDGIHVTRSENVQIIKTVIKTGDDCIS 306
Query: 122 L----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------ 153
+ GHGIS+GSLGKG ++ V + V GT
Sbjct: 307 IVNGSTNIEAIDVTCGPGHGISIGSLGKGKSEARVSNVMVNTAKLIGTTNGVRIKTWQGG 366
Query: 154 ----------NIVTNNVENPIVIDQLYC----PYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
+I NV NPI+IDQ YC P N+ N S V+ N+ + NI GTSA
Sbjct: 367 SGYAENIVFQDIKMENVSNPIIIDQNYCDQETPCNEQN----SAVQIRNIVYKNITGTSA 422
Query: 200 NK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
K +PCQ I +IN V K + S C+NV
Sbjct: 423 TKMTIIFNCSKTLPCQGIVQKDINLV-----TKRTEKQINSACNNV 463
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
NV DFGA DG+ DD++AF+TAW E C+ + +AVLV P
Sbjct: 108 NVDDFGAKGDGVTDDTEAFKTAWEETCSSN---TAVLVVP 144
>gi|50313466|gb|AAT74603.1| polygalacturonase [Musa acuminata AAA Group]
Length = 419
Score = 101 bits (252), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 123/282 (43%), Gaps = 90/282 (31%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VP-----------------PG 43
F+V+ FGAV DG+ DD++AF +AWR AC+ ++SA L VP PG
Sbjct: 71 FDVRSFGAVGDGVTDDTEAFRSAWRAACS---VESATLFVPSDGVFMITSTIFPGPCQPG 127
Query: 44 KYLSI---------------------RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
+ RF + T+ ++ +S FHI C ++ +
Sbjct: 128 LVFQVILSTKITCSGCIXLLLWIQLIRFFMSCNLTVRDLRIENSPQFHIKFDACEDVHIE 187
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIA---------TGDDCVSL----------- 122
L I + A SPNT+G+HI ++ I +S+I+ +GDDC+S+
Sbjct: 188 GLSINSPAFSPNTDGVHIENTRSVTIYNSMISNGWKRLLSGSGDDCISIGPGCSDVDIQN 247
Query: 123 -----GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN----------------------I 155
GHGIS+GSLG ++ V ++V+N ++ +
Sbjct: 248 VTCGPGHGISIGSLGMHNSEACVSNVSVKNAVIRNSDNGVRIKTWQGGMGSVSDISFDTV 307
Query: 156 VTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT 197
NV NPI+IDQ YC C + S V S+V + IRGT
Sbjct: 308 YMENVRNPIIIDQYYCLSESC-LNQTSAVYVSDVSYTGIRGT 348
>gi|357450939|ref|XP_003595746.1| Polygalacturonase [Medicago truncatula]
gi|355484794|gb|AES65997.1| Polygalacturonase [Medicago truncatula]
Length = 444
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 109/236 (46%), Gaps = 54/236 (22%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ ++ DS+ H+ C+N+ +++L + A DSPNT+GIH+ + +I + I TGD
Sbjct: 210 VKNLRFKDSQQMHVVFERCFNVFVSNLIVRAPEDSPNTDGIHVAETQNIDIINCDIGTGD 269
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG ++ EV + V TGT
Sbjct: 270 DCISIVSGSKNVRAIDITCGPGHGISIGSLGADNSEAEVSNVVVNRAALTGTTNGVRIKT 329
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
NI NV NP++IDQ YC + + V+ S V + NIRGTSA
Sbjct: 330 WQGGSGYARNIKFMNIKMQNVTNPVIIDQYYCDQTEPCQERNKAVQLSQVLYQNIRGTSA 389
Query: 200 NKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
++I PC+ I + ++ G G TT+ C NV+ GK P
Sbjct: 390 SEIAIKFNCSRSVPCREIYLQDVILEPEG------GGGTTATCENVRYVNRGKFYP 439
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%), Gaps = 5/42 (11%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
+ +V DFGA ADG +DD +AF+ AW EAC+ K VLV P
Sbjct: 73 MVSVDDFGARADG-RDDWEAFKKAWNEACS----KGYVLVVP 109
>gi|359482694|ref|XP_002266543.2| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 366
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 110/235 (46%), Gaps = 44/235 (18%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F N+ + G+ ++S+ HI++ G + ++ L ITA SPNT+GI I S
Sbjct: 120 AMGFYSCNNLLLQGLNFINSQRNHISVSGSNGVTISHLTITAPDSSPNTDGIDISHSKNV 179
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+S S I TGDDC++ GHGIS+GSLG G +V + V +C+F
Sbjct: 180 RVSDSTIGTGDDCIAFGDQTSQVFVKGVACGPGHGISIGSLGVGGASAQVEEIHVDSCSF 239
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
GT NI + ENPI+IDQ YCP++ C S V+ S+
Sbjct: 240 KGTQNGARIKTWQGGSGYARKITFNNIKLEDAENPIIIDQYYCPHSVCQTTT-SAVQISD 298
Query: 189 VRFNNIRGTSAN----KIPC-QNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F GTSA K+ C + +G NI+ Y + + T S C N T
Sbjct: 299 VSFTGFLGTSATDNAIKLSCSETVGCTNISLDYINIKLASGNGNTYSSCINAHGT 353
>gi|223947811|gb|ACN27989.1| unknown [Zea mays]
gi|413948584|gb|AFW81233.1| hypothetical protein ZEAMMB73_645258 [Zea mays]
Length = 421
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 48/223 (21%)
Query: 38 VLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEG 97
+L+P K ++RF ++ T+ GI V+S H+ C + ++DL +++ DSPNT+G
Sbjct: 146 MLLPRTKPTALRFYGSSNVTVAGITIVNSSQCHLKFDSCEGVMVHDLSVSSPEDSPNTDG 205
Query: 98 IHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV 141
IH+ +S G +I H+ +A GDDC+S+ GHGIS+G LG+ V
Sbjct: 206 IHLQNSRGVDIHHATLACGDDCISIQTGCSDVNIHSVNCGPGHGISIGGLGRFNTKACVS 265
Query: 142 GLTVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIK 179
+TVR+ T TG +NI V+ PI+IDQ YC C +
Sbjct: 266 NVTVRDVKMFRTTTGVRIKTWQGGSGLVQGVRFSNIQVTEVQTPIMIDQFYCDRATCRNQ 325
Query: 180 VPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S V++ ++RGT ++ PC I + I
Sbjct: 326 T-SAVAVSGVQYEDVRGTFTVRPAHLACSDSSPCSGITLAGIQ 367
>gi|238011668|gb|ACR36869.1| unknown [Zea mays]
Length = 421
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 48/222 (21%)
Query: 38 VLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEG 97
+L+P K ++RF ++ T+ GI V+S H+ C + ++DL +++ DSPNT+G
Sbjct: 146 MLLPRTKPTALRFYGSSNVTVAGITIVNSSQCHLKFDSCEGVMVHDLSVSSPEDSPNTDG 205
Query: 98 IHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV 141
IH+ +S G +I H+ +A GDDC+S+ GHGIS+G LG+ V
Sbjct: 206 IHLQNSRGVDIHHATLACGDDCISIQTGCSDVNIHSVNCGPGHGISIGGLGRFNTKACVS 265
Query: 142 GLTVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIK 179
+TVR+ T TG +NI V+ PI+IDQ YC C +
Sbjct: 266 NVTVRDVKMFRTTTGVRIKTWQGGSGLVQGVRFSNIQVTEVQTPIMIDQFYCDRATCRNQ 325
Query: 180 VPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V S V++ ++RGT ++ PC I + I
Sbjct: 326 T-SAVAVSGVQYEDVRGTFTVRPAHLACSDSSPCSGITLAGI 366
>gi|297807483|ref|XP_002871625.1| hypothetical protein ARALYDRAFT_488306 [Arabidopsis lyrata subsp.
lyrata]
gi|297317462|gb|EFH47884.1| hypothetical protein ARALYDRAFT_488306 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 101 bits (251), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 124/324 (38%), Gaps = 115/324 (35%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL-------------- 46
NV D GA DG DD+KAFE AW+ AC S +LVP G
Sbjct: 50 TINVLDHGAKGDGKSDDTKAFEDAWKVACKV--AASTLLVPSGSTFLVGPISFLGKECKE 107
Query: 47 --------------SIRFNFLNDSTITGIKSVDSR------------------------- 67
S +F L TI G +D R
Sbjct: 108 NIVFQIDGKIIAPTSAKFKSLKGITIKGKGIIDGRGSVWWNNAKMPRTKPTALRFYGSNG 167
Query: 68 ------------YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIAT 115
H+ C +++++D ++ DSPNT+GIH+ +S + I S +A
Sbjct: 168 VTVSGITIQNSPQTHLKFDNCKSIQVSDFTTSSPGDSPNTDGIHLQNSQDAVIYRSTLAC 227
Query: 116 GDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------ 153
GDDC+S+ GHGIS+G LGK V +TVR+ T T
Sbjct: 228 GDDCISIQTGCSNINIHDVDCGPGHGISIGGLGKDNTKACVSNITVRDVTMHETTNGVRI 287
Query: 154 ----------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT 197
NI +NV NPI+IDQ YC C+ + S V SN+ + NI+GT
Sbjct: 288 KSWQGGSGSVKQVMFSNIQVSNVANPIIIDQYYCDGGGCHNET-SAVAVSNINYINIKGT 346
Query: 198 ---------SANKIPCQNIGIGNI 212
++ +PC I + I
Sbjct: 347 YTKEPVRFACSDSLPCTGISLSTI 370
>gi|297744034|emb|CBI37004.3| unnamed protein product [Vitis vinifera]
Length = 484
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 52/242 (21%)
Query: 22 ETAWREACN-WDGIKSAVLVPP-GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 79
E W C GI L P ++IRF ++ T+ G++ +S F+ C ++
Sbjct: 195 ENWWNLPCKPHKGINGTTLPGPCDSPIAIRFFMSSNLTVQGLRIKNSPQFNFRFDNCRDV 254
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG---------------- 123
+ + ITA A SPNT+GIHI ++N +I +SV++ GDDCVS+G
Sbjct: 255 HIESIYITAPALSPNTDGIHIENTNNVKIYNSVVSNGDDCVSIGSGCYDVDIKNITCGPS 314
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTF----------------------TGTNIVTNNVE 161
HGIS+GSLG + V +TVR+ T +N+ NNV
Sbjct: 315 HGISIGSLGNHNSRACVSNITVRDSVLKYSDNGVRIKTWQGGSGAVSGVTFSNLHMNNVR 374
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT-----------SANKIPCQNIGIG 210
NPI+IDQ YC +C + S V SN+ ++NI+GT ++ +PC N+ +
Sbjct: 375 NPIIIDQFYCLAKQC-MNQTSAVLVSNIIYSNIKGTYDIRSPAMHFACSDSVPCTNLTLS 433
Query: 211 NI 212
++
Sbjct: 434 DV 435
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
VF+V+ FGAV +GI DD++AF+ AW AC + + V VP G ++F+ STI
Sbjct: 88 VFDVRSFGAVGNGIADDTQAFKAAWDTACQVEE-SAIVFVPYG------YSFMIQSTI 138
>gi|125542915|gb|EAY89054.1| hypothetical protein OsI_10538 [Oryza sativa Indica Group]
Length = 411
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 124/296 (41%), Gaps = 95/296 (32%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNF---LNDS 56
V +V D+ A AD D ++AF AW+EACN S +LVP GK YL + +F +
Sbjct: 65 VVDVDDYRARADA-GDHTEAFLQAWKEACNSSDYPSVLLVPEGKTYLLMPVSFNGPCRAT 123
Query: 57 TITGIKSV---------------------------------------------------- 64
TIT + +
Sbjct: 124 TITATEWITFDNIDHLRVLGGGTLNGNGHQWWINSCKTNRSMALYFRRCNHLVVDGLQIR 183
Query: 65 DSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL-- 122
DS H+ I + + ++ L ITA SPNT+GIH+ +S +S +I+TGDDC+S+
Sbjct: 184 DSMQMHVVIAYSWRVLVSRLLITAPGWSPNTDGIHVSNSREVLMSGCIISTGDDCISIVT 243
Query: 123 --------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT--------------- 153
GHGIS+GSLG + V + V T GT
Sbjct: 244 GSMFIRATGIFCGPGHGISIGSLGANKSWAHVSDVLVEKATLVGTTNGVRIKTWQGGDGH 303
Query: 154 -------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI 202
+I +NV NP++IDQ YC + S V +N+R+ NIRGTS++K+
Sbjct: 304 AERITFQDITMHNVTNPVIIDQNYCDSMTPCHEQGSAVAINNIRYRNIRGTSSSKV 359
>gi|6648209|gb|AAF21207.1|AC013483_31 putative polygalacturonase [Arabidopsis thaliana]
Length = 438
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 53/251 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++ F N+ ++ I+ +++ H+ C N+K +L +T+ ADSPNT+GIH+
Sbjct: 190 GAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSG 249
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
+ I S++ TGDDC+S+ GHGIS+GSLG+ ++ V + V
Sbjct: 250 TQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVN 309
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
T GT +I+ NV NPI+I+Q YC + + S V
Sbjct: 310 KATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAV 369
Query: 185 KTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+ SNV + NI+GTS+ IPC+ I + N+ V + + + + CSN
Sbjct: 370 QVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVD-----QTQQDVSKASCSN 424
Query: 235 VKPTLFGKQIP 245
VK G P
Sbjct: 425 VKLDTRGNVSP 435
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGI 34
FNV FGA A+G DDSKAF AW AC+ GI
Sbjct: 71 FNVNTFGAKANG-NDDSKAFMKAWEAACSSTGI 102
>gi|125585408|gb|EAZ26072.1| hypothetical protein OsJ_09925 [Oryza sativa Japonica Group]
Length = 411
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 124/296 (41%), Gaps = 95/296 (32%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNF---LNDS 56
V +V D+ A AD D ++AF AW+EACN S +LVP GK YL + +F +
Sbjct: 65 VVDVDDYRARADA-GDHTEAFLQAWKEACNSSDYPSVLLVPEGKTYLLMPVSFNGPCRAT 123
Query: 57 TITGIKSV---------------------------------------------------- 64
TIT + +
Sbjct: 124 TITATEWITFDNIDHLRVLGGGTLNGNGHQWWINSCKTNRSMALYFRRCNHLVVEGLQIR 183
Query: 65 DSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL-- 122
DS H+ I + + ++ L ITA SPNT+GIH+ +S +S +I+TGDDC+S+
Sbjct: 184 DSMQMHVVIAYSWRVLVSRLLITAPGWSPNTDGIHVSNSREVLMSGCIISTGDDCISIVT 243
Query: 123 --------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT--------------- 153
GHGIS+GSLG + V + V T GT
Sbjct: 244 GSMFIRATGIFCGPGHGISIGSLGANKSWAHVSDVLVEKATLVGTTNGVRIKTWQGGDGH 303
Query: 154 -------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI 202
+I +NV NP++IDQ YC + S V +N+R+ NIRGTS++K+
Sbjct: 304 AERITFQDITMHNVTNPVIIDQNYCDSMTPCHEQGSAVAINNIRYRNIRGTSSSKV 359
>gi|22330914|ref|NP_187454.2| Polygalacturonase QRT2 [Arabidopsis thaliana]
gi|226736750|sp|Q9SFB7.2|QRT2_ARATH RecName: Full=Polygalacturonase QRT2; Short=AtQRT2; Short=PG QRT2;
AltName: Full=Pectinase QRT2; AltName: Full=Protein
QUARTET 2; Flags: Precursor
gi|332641105|gb|AEE74626.1| Polygalacturonase QRT2 [Arabidopsis thaliana]
Length = 439
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 53/251 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++ F N+ ++ I+ +++ H+ C N+K +L +T+ ADSPNT+GIH+
Sbjct: 191 GAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSG 250
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
+ I S++ TGDDC+S+ GHGIS+GSLG+ ++ V + V
Sbjct: 251 TQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVN 310
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
T GT +I+ NV NPI+I+Q YC + + S V
Sbjct: 311 KATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAV 370
Query: 185 KTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+ SNV + NI+GTS+ IPC+ I + N+ V + + + + CSN
Sbjct: 371 QVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVD-----QTQQDVSKASCSN 425
Query: 235 VKPTLFGKQIP 245
VK G P
Sbjct: 426 VKLDTRGNVSP 436
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGI 34
FNV FGA A+G DDSKAF AW AC+ GI
Sbjct: 71 FNVNTFGAKANG-NDDSKAFMKAWEAACSSTGI 102
>gi|357489585|ref|XP_003615080.1| Polygalacturonase [Medicago truncatula]
gi|355516415|gb|AES98038.1| Polygalacturonase [Medicago truncatula]
Length = 315
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 119/292 (40%), Gaps = 115/292 (39%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS------------- 47
+FNV + A ++G D+S+AF AW +AC W G KS +L+P G Y
Sbjct: 24 IFNVITYNASSNGNTDNSEAFLKAWSDACKWKG-KSTILIPNGTYTLRGPCNSSINFRLE 82
Query: 48 -----------------IRFNFLNDSTITGIKSVDSR----------------------- 67
I F ++N + G S+D++
Sbjct: 83 GLLKAPIDPKSFASDNWINFKYVNKLMVGGGGSLDAQGAYAWKMNDCQKNPNCRPLPTSM 142
Query: 68 --------YFH-----------INILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEI 108
Y H + C N+ L L+I A DSPNT+GI IG S G I
Sbjct: 143 KFDYITNGYIHHMHSFNSKQSHFGLYRCNNMTLTKLQIKAPGDSPNTDGIKIGKSTGINI 202
Query: 109 SHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTG 152
+ I TG+DC+S+ GHGI++GSLGK ++E++ + V+NCTF G
Sbjct: 203 TSVNIRTGNDCISMLSGLKNVQIMDVYCGPGHGINIGSLGKYEDEEDLADIIVKNCTFNG 262
Query: 153 T-------------------------NIVTNNVENPIVIDQLYCPYN-KCNI 178
T +IV NVE IVIDQ YC + +CN+
Sbjct: 263 TSNGVRIKSYESQLNKTVVASNFIYEDIVMENVEYHIVIDQHYCSNSGECNL 314
>gi|307135900|gb|ADN33764.1| polygalacturonase [Cucumis melo subsp. melo]
Length = 329
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 92/173 (53%), Gaps = 39/173 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P +++F+ + ++ + S++S+ FHI I GC N+ + +K+ A +SPNT+GIH
Sbjct: 151 PSGATTLQFSNSKNVVVSALTSLNSQMFHIVINGCQNVTMRGIKVLASGNSPNTDGIHGQ 210
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+ + +S I TGDDC+S+ GHGIS+GSL K + +E V +TV
Sbjct: 211 MSSNVAVLNSKIGTGDDCISIGPGTSNLRIENIVCGPGHGISIGSLAKDLQEEGVQNVTV 270
Query: 146 RNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNK 175
+N F+ T +IV +NV+NPIVIDQ YCP +K
Sbjct: 271 KNVVFSRTQNGVRIKAWGKPSNGFARKILFQHIVMDNVQNPIVIDQNYCPRHK 323
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+NV FG DG D ++AF+T W AC+ + + VP G+Y
Sbjct: 34 YNVVSFGGKGDGRTDSTQAFQTVWSNACS-STKPATIYVPRGRY 76
>gi|359479968|ref|XP_002272733.2| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
Length = 465
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 52/242 (21%)
Query: 22 ETAWREACN-WDGIKSAVLVPP-GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 79
E W C GI L P ++IRF ++ T+ G++ +S F+ C ++
Sbjct: 176 ENWWNLPCKPHKGINGTTLPGPCDSPIAIRFFMSSNLTVQGLRIKNSPQFNFRFDNCRDV 235
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG---------------- 123
+ + ITA A SPNT+GIHI ++N +I +SV++ GDDCVS+G
Sbjct: 236 HIESIYITAPALSPNTDGIHIENTNNVKIYNSVVSNGDDCVSIGSGCYDVDIKNITCGPS 295
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTF----------------------TGTNIVTNNVE 161
HGIS+GSLG + V +TVR+ T +N+ NNV
Sbjct: 296 HGISIGSLGNHNSRACVSNITVRDSVLKYSDNGVRIKTWQGGSGAVSGVTFSNLHMNNVR 355
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT-----------SANKIPCQNIGIG 210
NPI+IDQ YC +C + S V SN+ ++NI+GT ++ +PC N+ +
Sbjct: 356 NPIIIDQFYCLAKQC-MNQTSAVLVSNIIYSNIKGTYDIRSPAMHFACSDSVPCTNLTLS 414
Query: 211 NI 212
++
Sbjct: 415 DV 416
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
VF+V+ FGAV +GI DD++AF+ AW AC + + V VP G ++F+ STI
Sbjct: 69 VFDVRSFGAVGNGIADDTQAFKAAWDTACQVEE-SAIVFVPYG------YSFMIQSTI 119
>gi|122894108|gb|ABM67700.1| polygalacturonase [Citrus sinensis]
Length = 445
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 54/250 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I F+ + + ++ V+S+ HI C + +++L++ A A+SPNT+GIHI +S G
Sbjct: 181 AITFHKCKNLKVQNLRVVNSQQMHIAFTNCLRVVISNLEVIAPAESPNTDGIHISASRGV 240
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKG-----INDEEVVGLTV 145
E+ +S++ TGDDC+S+ GHGIS+GSLGK I+D V G +
Sbjct: 241 EVKNSIVGTGDDCISIVGNSSLIRIRNFACGPGHGISIGSLGKSNSSVRIHDIMVYGALI 300
Query: 146 RNC-------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
N T+ G +++ NV NPI+IDQ YC S VK N
Sbjct: 301 SNTQNGVRIKTWQGGSGSATNIQFLDVLMKNVSNPIIIDQYYCDSPVPCANQTSAVKVEN 360
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
+ F +I+GTSA + PC+ + + ++ V + G S C +
Sbjct: 361 ITFIHIKGTSATEEAIKFACSDDSPCEGLFLEDVQLVSH------SGGIAKSFCWEAYGS 414
Query: 239 LFGKQIPATC 248
G+ P C
Sbjct: 415 SVGQVEPPPC 424
>gi|297811865|ref|XP_002873816.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297319653|gb|EFH50075.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 422
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 150/383 (39%), Gaps = 147/383 (38%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK------------------ 44
+V FGA+ DG DD+KAF AW C G + +LVP GK
Sbjct: 40 SVTSFGAIGDGETDDTKAFLKAWEAVCK-GGRNTKILVPQGKTFMLKPLAFIGPCKSSSI 98
Query: 45 YLSIR--------------------FNFLNDSTITGIKSVDSR---------------YF 69
SIR F+ +N +TG ++D+R +F
Sbjct: 99 SFSIRGNLVAPGYTWYAGRYPTWISFDSINGLVVTGGGTIDARGSLWWGNVNTRPSAMHF 158
Query: 70 -------------------HINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISH 110
H+ + N+++ +++TA DSPNT+GI I + G I
Sbjct: 159 NNCNGLRISNLRHLNSPRNHVGLSCSQNIEVTGIRMTAPGDSPNTDGIDISNCKGVHIHD 218
Query: 111 SVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT- 153
SVIATGDDC+++ GHGISVGSLG + V + V+NCTFT T
Sbjct: 219 SVIATGDDCIAINSGSSHINITGIFCGPGHGISVGSLGVTGDFATVEEVRVKNCTFTNTQ 278
Query: 154 ---------------------NIVTNNVENPIVIDQLYC-------------PYNKCNIK 179
+I+ ENPI+IDQ Y Y C++
Sbjct: 279 NGVRIKTYQNGSGYARKISFEDIIMVASENPIIIDQTYHNGGTNGGRSKSSNSYQNCHLA 338
Query: 180 VPSQ--------VKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNV 221
+ V+ S+VR+++IRG+SA+ + C +I + N+N V
Sbjct: 339 AKQRTQSGNGKGVRVSDVRYSSIRGSSASDQAITLNCDADLGCSDIVMNNVNMV-----S 393
Query: 222 KVEGPETTSLCSNVKPTLFGKQI 244
G + + C N + F ++
Sbjct: 394 ATFGHKVFATCKNAHGSFFASKV 416
>gi|350537043|ref|NP_001234021.1| polygalacturonase-2 precursor [Solanum lycopersicum]
gi|129939|sp|P05117.1|PGLR_SOLLC RecName: Full=Polygalacturonase-2; Short=PG; AltName: Full=PG-2A;
AltName: Full=PG-2B; AltName: Full=Pectinase; Flags:
Precursor
gi|19292|emb|CAA28254.1| unnamed protein product [Solanum lycopersicum]
gi|19298|emb|CAA29148.1| unnamed protein product [Solanum lycopersicum]
gi|170473|gb|AAA34178.1| polygalacturonase [Solanum lycopersicum]
gi|295813|emb|CAA32235.1| polygalacturonase [Solanum lycopersicum]
Length = 457
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 112/226 (49%), Gaps = 54/226 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +KS +++ HI C N+ ++L I A A SPNT+G+H+ ++ +IS ++I TGD
Sbjct: 211 VNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGD 270
Query: 118 DCVSL----------------GHGISVGSLGKG----------INDEEVVGLT--VRNCT 149
DC+S+ GHGIS+GSLG G +N+ +++G VR T
Sbjct: 271 DCISIVSGSQNVQATNITCGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKT 330
Query: 150 FTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
+ G N+ +V+ PI+IDQ YC + I+ S V+ NV + NI+GTSA
Sbjct: 331 WQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSA 390
Query: 200 NKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
K+ PC+ I + NIN V G + + C NV
Sbjct: 391 TKVAIKFDCSTNFPCEGIIMENINLVGES------GKPSEATCKNV 430
>gi|225933|prf||1403396A endopolygalacturonase
Length = 456
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 112/226 (49%), Gaps = 54/226 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +KS +++ HI C N+ ++L I A A SPNT+G+H+ ++ +IS ++I TGD
Sbjct: 211 VNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGD 270
Query: 118 DCVSL----------------GHGISVGSLGKG----------INDEEVVGLT--VRNCT 149
DC+S+ GHGIS+GSLG G +N+ +++G VR T
Sbjct: 271 DCISIVSGSQNVQATNITCGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKT 330
Query: 150 FTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
+ G N+ +V+ PI+IDQ YC + I+ S V+ NV + NI+GTSA
Sbjct: 331 WQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSA 390
Query: 200 NKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
K+ PC+ I + NIN V G + + C NV
Sbjct: 391 TKVAIKFDCSTNFPCEGIIMENINLVGES------GKPSEATCKNV 430
>gi|15241591|ref|NP_199297.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|2660666|gb|AAC79137.1| putative polygalacturonase [Arabidopsis thaliana]
gi|10177474|dbj|BAB10865.1| polygalacturonase [Arabidopsis thaliana]
gi|332007784|gb|AED95167.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 381
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 119/245 (48%), Gaps = 49/245 (20%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+ + F ND ITGI S +S HI+I C +K+ +K+ A DSPNT+GI+I S+
Sbjct: 134 WKQLHFQRCNDLMITGITSFNSPKNHISISECKRVKITKIKLVAPHDSPNTDGINISESS 193
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
+I +VI TGDDCV++ GHGISVGS+G+ + V + V NC
Sbjct: 194 DVDIYDTVIGTGDDCVAINSGSMNINIARMNCGPGHGISVGSVGRDGEESIVENVQVTNC 253
Query: 149 TFTGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
TF T+ + +NPI+IDQ Y + +++ S V
Sbjct: 254 TFIRTDNGARIKTWPNGKGYAKNILFKSLTFRETKNPIIIDQNYVDKGRLDVE-ESAVAI 312
Query: 187 SNVRFNNIRGTSAN----KIPCQNIGIGNINWVYNGVNVK-VEGPETTSLCSNVKPTLFG 241
SNV F ++RGTS KI C + + V + +++ V+G + CSNV +G
Sbjct: 313 SNVTFTDLRGTSKLDEIIKIDCSKVTYCK-DIVLDKIDIATVDGNKPIVECSNV----YG 367
Query: 242 KQIPA 246
K I A
Sbjct: 368 KSINA 372
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+++V +FGA +GI DDSKAF AW C G ++P K ++
Sbjct: 23 IYDVLEFGADGNGITDDSKAFVKAWSAMCGSGGNSKTFIIPSNKTFLLQ 71
>gi|414876106|tpg|DAA53237.1| TPA: hypothetical protein ZEAMMB73_980438 [Zea mays]
Length = 437
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 52/223 (23%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
+ + + F+F + +T I+ +S H+ + C ++ + I A DSPNT+GI + S
Sbjct: 186 ARPILLAFSFCDHLRVTRIRLTNSADKHMTLFRCSQALVDGVSIAAPPDSPNTDGITVAS 245
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
SN + IS+ I +GDDCVS+ GHGISVGSLG+ V + V
Sbjct: 246 SNHTVISNCSIRSGDDCVSILSQTRNVTVTRSTCGPGHGISVGSLGRS-ESAVVEQIVVT 304
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
NC+F GT + V+ PIVIDQ YCP C +K P V
Sbjct: 305 NCSFVGTMNGVRIKSWQGGKGYAKGFLFAGLNMTGVQYPIVIDQFYCPQGNCPVK-PGGV 363
Query: 185 KTSNVRFNNIRGTSANK----------IPCQNIGIGNIN--WV 215
++ RF +I+GTS+ + + C I + N+N WV
Sbjct: 364 AITDARFIDIQGTSSRQEAIRLLCSQSVHCHGIYLSNVNLSWV 406
>gi|116786106|gb|ABK23977.1| unknown [Picea sitchensis]
gi|116789399|gb|ABK25238.1| unknown [Picea sitchensis]
gi|224284249|gb|ACN39860.1| unknown [Picea sitchensis]
Length = 440
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 135/291 (46%), Gaps = 74/291 (25%)
Query: 13 GIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDST----ITGIKSVDSRY 68
GI D S E W +C+ D K + VP F F+ +S+ + + +S+
Sbjct: 157 GIIDGSG--EKWWAGSCSRDQNKVCLSVP--------FAFVVNSSSNVHLRDLTFQNSQK 206
Query: 69 FHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------ 122
FH+ I ++++ +L+I A DSPNT+GIHI +S I + IATGDDCVS+
Sbjct: 207 FHVVISLSKHVEVENLQIVAPGDSPNTDGIHIFTSEHVMIRNCTIATGDDCVSIIAQSSH 266
Query: 123 ----------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------- 153
GHGIS+GSLGK + V + V + +GT
Sbjct: 267 IQVNDIICGPGHGISIGSLGKYNATDTVSDVVVNRASLSGTQNGLRIKTWQGGSGYAQGI 326
Query: 154 ---NIVTNNVENPIVIDQLYCP-YNKCNIKVP-----SQVKTSNVRFNNIRGTSANK--- 201
++ NV NPI+IDQ YC ++CN P S V+ +NV + I GTSA +
Sbjct: 327 IFQHVKMINVSNPIIIDQYYCAGSSRCNQPAPCNNQTSAVQVNNVTYTGITGTSATQEAI 386
Query: 202 -------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
+PC NI + +I+ N G +SL +NV+ + G+ IP
Sbjct: 387 KLACSATVPCTNIVLEDISLQLN------NGDTPSSLSANVQGSSTGQVIP 431
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYL--SIRFN 51
VF+V +GA +G+ DDS+AF AW AC S LVP G YL I FN
Sbjct: 57 VFSVDSYGAKGNGVSDDSQAFLAAWNAACT-SSSDSIFLVPHGNSYLVKPISFN 109
>gi|224284550|gb|ACN40008.1| unknown [Picea sitchensis]
Length = 440
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/291 (31%), Positives = 135/291 (46%), Gaps = 74/291 (25%)
Query: 13 GIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDST----ITGIKSVDSRY 68
GI D S E W +C+ D K + VP F F+ +S+ + + +S+
Sbjct: 157 GIIDGSG--EKWWAGSCSRDQNKVCLSVP--------FAFVVNSSSNVHLRDLTFQNSQK 206
Query: 69 FHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------ 122
FH+ I ++++ +L+I A DSPNT+GIHI +S I + IATGDDCVS+
Sbjct: 207 FHVVISLSKHVEVENLQIVAPGDSPNTDGIHIFTSEHVMIRNCTIATGDDCVSIIAQSSH 266
Query: 123 ----------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------- 153
GHGIS+GSLGK + V + V + +GT
Sbjct: 267 IQVNDIICGPGHGISIGSLGKYNATDTVSDVVVNRASLSGTQNGLRIKTWQGGSGYAQGI 326
Query: 154 ---NIVTNNVENPIVIDQLYCP-YNKCNIKVP-----SQVKTSNVRFNNIRGTSANK--- 201
++ NV NPI+IDQ YC ++CN P S V+ +NV + I GTSA +
Sbjct: 327 IFQHVKMINVSNPIIIDQYYCAGSSRCNQPAPCNNQTSAVQVNNVTYTGITGTSATQEAI 386
Query: 202 -------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
+PC NI + +I+ N G +SL +NV+ + G+ IP
Sbjct: 387 KLACSATVPCTNIVLEDISLQLN------NGDTPSSLSANVQGSSTGQVIP 431
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYL--SIRFN 51
VF+V +GA +G+ DDS+AF AW AC S LVP G YL I FN
Sbjct: 57 VFSVDSYGAKGNGVSDDSQAFLAAWNAACT-SSSDSIFLVPHGNSYLVKPISFN 109
>gi|7959983|gb|AAF71160.1|AF152758_1 polygalacturonase A [Actinidia chinensis]
Length = 463
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 113/237 (47%), Gaps = 56/237 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +K +++ H++ C N++ ++L +T +SPNT+GIH+ + IS VI TGD
Sbjct: 224 VKNLKIENAQQIHVSFDNCVNVQASNLMVTTPENSPNTDGIHVTGTQNIHISSCVIETGD 283
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG G ++ V + V GT
Sbjct: 284 DCISIVSGGQKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKT 343
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
N+ +NVENPI+IDQ YC +K + S V+ N+ + NI+GT A
Sbjct: 344 WQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNIFYKNIKGTCA 403
Query: 200 N----------KIPCQNIGIGNINWVYNGVNVKVE-GPETTSLCSNVKPTLFGKQIP 245
+ + PCQ I V V++++E G +LC+NV+ + G P
Sbjct: 404 SNVAITFDCSKRFPCQGI-------VLEDVDLEIEGGAAAKALCNNVELSETGVVSP 453
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
NV DFGA DG DD+KAFE AW+ C+ SAVL+ P K +R
Sbjct: 91 NVDDFGAKGDG-SDDTKAFEKAWKAVCS--STSSAVLLVPQKNYLVR 134
>gi|449445220|ref|XP_004140371.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 392
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 57/268 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W+ S P G ++ + + + G+ S++S+ F+I + GC N+++ + +++
Sbjct: 132 WNCKHSGKSCPDGA-TNLEISHAQNVNVNGLSSINSQMFNIVVYGCENVQIQGVNVSSAG 190
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
DSPNT+GIH+ S IS + I TGDDC+S+ GHGIS+GSLG+
Sbjct: 191 DSPNTDGIHVQQSLNVNISSTSIGTGDDCISIGPGTTNLWMENIKCGPGHGISIGSLGRQ 250
Query: 135 INDEEVV--------------GLTVRNC-----TFTG----TNIVTNNVENPIVIDQLYC 171
+ + V G+ +++ F +I NV NPI+IDQ YC
Sbjct: 251 VEEAGVENVTVTTATFTGTQNGVRIKSWGRPSNAFANKILFQHIRFYNVNNPILIDQNYC 310
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNV 221
P N+ S VK S+V + ++ GTSA+++ PC I + +I YN
Sbjct: 311 PNNQGCPGQASGVKVSDVTYQDVNGTSASEVAINFDCSPTNPCTGITLEDIQLTYNNQIP 370
Query: 222 KVEGPETTSLCSNVKPTLFGKQIPATCV 249
K C N + T G P +C+
Sbjct: 371 KAS-------CKNARGTASGPLQPRSCL 391
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
FN+ GA+ADG D S AF+ AW AC + + VP G + NF
Sbjct: 27 FNIVSLGAIADGKTDASHAFQEAWANACG-SSEPATIYVPNGAFYIQSGNF 76
>gi|356571013|ref|XP_003553676.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 462
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF ++ T+ G++ +S FH GC N+ + + ITA SPNT+GIHI ++N
Sbjct: 199 IAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCKNVHIESIYITAPKLSPNTDGIHIENTND 258
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
+I +SVI+ GDDCVS+ GHGIS+GSLG + V + VR+
Sbjct: 259 MKIYNSVISNGDDCVSIGSGCNDVDIKNITCGPGHGISIGSLGNHNSRACVSNIMVRDSF 318
Query: 149 -----------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T+ G +NI +V NPI+IDQ YC +C K S V S
Sbjct: 319 IKVTDNGVRIKTWQGGSGSVSGVTFSNIHMVSVRNPIIIDQFYCLTKECTNKT-SAVSVS 377
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
N+ + NI+GT ++ +PC N+ + +I
Sbjct: 378 NIIYTNIKGTYDIRSPPMRFACSDSVPCTNLTLSDI 413
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
+ +V+ FGA+ DG DD+ +F+ AW AC + + +LVP G F+FL STI
Sbjct: 65 ILDVRKFGAIGDGETDDTGSFKMAWDSACQSESAVNVILVPQG------FSFLIQSTI 116
>gi|3367585|emb|CAA20037.1| putative polygalacturonase [Arabidopsis thaliana]
gi|7270518|emb|CAB80283.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 374
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 124/305 (40%), Gaps = 107/305 (35%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK----------------- 44
+NV +F A DG DDS+AF AW AC DG +L+P GK
Sbjct: 14 YNVLNFDAKGDGQTDDSEAFLQAWTAACGGDGDIKTLLIPSGKTFLLQPTVFQGPCKSSS 73
Query: 45 -----------------------YLSIRFNFLNDSTITGIKSVDSR-------------- 67
+ I+F+ ++ I G ++DSR
Sbjct: 74 IKVQLDGTIVAPSDKFAWSDPISRMWIKFSTVSGLIIVGSGTIDSRGSSFWEALHISKCD 133
Query: 68 -------------YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIA 114
HI+I C + ++++ + A SPNT+GI I S I S I
Sbjct: 134 NLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDISDSTNINIFDSTIQ 193
Query: 115 TGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF-------- 150
TGDDC+++ GHGISVGSLG G + +V + V +CTF
Sbjct: 194 TGDDCIAINSGSSNINITGINCGPGHGISVGSLGAGGAEAKVSDVQVTHCTFNQTTNGAR 253
Query: 151 --------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRG 196
+ T+I N +NPI+IDQ Y +K + S V SNV+F + RG
Sbjct: 254 IKTWLGGQGYARNISFTDITLVNTKNPIIIDQHY--IDKGRLTEESAVAISNVKFVDFRG 311
Query: 197 TSANK 201
TS+NK
Sbjct: 312 TSSNK 316
>gi|297791313|ref|XP_002863541.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297309376|gb|EFH39800.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/245 (33%), Positives = 118/245 (48%), Gaps = 49/245 (20%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+ + F ND I+GI S +S HI+I C +K+ +K+ A DSPNT+GI I S+
Sbjct: 134 WKQLHFKSCNDLKISGITSFNSPRNHISISECKRVKITKIKLVAPHDSPNTDGIDISRSS 193
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
+I ++I TGDDCV++ GHGISVGSLG+ + V + V NC
Sbjct: 194 DVDIYDTIIGTGDDCVAINNGSMNINITRMNCGPGHGISVGSLGRDGEESIVENVQVTNC 253
Query: 149 TFTGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
TF T+ + +NPI+IDQ Y + +++ S V
Sbjct: 254 TFFRTDNGARIKTWPNGKGYAKNILFQGLTFRETKNPIIIDQNYVDKGRLDVE-ESAVAI 312
Query: 187 SNVRFNNIRGTSAN----KIPCQNIGIGNINWVYNGVNVK-VEGPETTSLCSNVKPTLFG 241
SNV F +IRGTS KI C + + V + +++ V+G + CSNV +G
Sbjct: 313 SNVTFTDIRGTSQVDEIIKIDCSKVTYCK-DIVLDKIDIATVDGNKPVVECSNV----YG 367
Query: 242 KQIPA 246
K I A
Sbjct: 368 KSINA 372
>gi|224115434|ref|XP_002332134.1| predicted protein [Populus trichocarpa]
gi|222875184|gb|EEF12315.1| predicted protein [Populus trichocarpa]
Length = 362
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 122/274 (44%), Gaps = 72/274 (26%)
Query: 24 AWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLND 83
AW +ACN ++ FN N ++ + V+S+ HI I C ++++++
Sbjct: 111 AWWKACN----------------ALHFNKCNGLRLSNLHHVNSQKGHICINACDDVEVSN 154
Query: 84 LKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGIS 127
L+I A +SPNT+GI I SN I S I TGDDC+++ GHGIS
Sbjct: 155 LQILAPDESPNTDGIDISESNHVNIHDSFIGTGDDCIAINGFSTSINVTGVKCGPGHGIS 214
Query: 128 VGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIV 165
+GSLGK E V + V++C F GT +I N ENPI+
Sbjct: 215 IGSLGKDGAYETVEDVHVKSCAFKGTQNGVRIKTWETGSGYVRKITFEDITFVNSENPII 274
Query: 166 IDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWV 215
IDQ Y P + S +K S+V + N+RG+SA+ K C NI + N+
Sbjct: 275 IDQQYNPNGN---RGGSGIKISDVTYRNVRGSSADEVAIALNCAGKAACTNIVMDNVK-- 329
Query: 216 YNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ G + + C+N K T C+
Sbjct: 330 ---ITSSNPGKQIRASCNNAKGTAISASPTVPCL 360
>gi|5902370|gb|AAD55472.1|AC009322_12 Similar to polygalacturonases [Arabidopsis thaliana]
Length = 381
Score = 100 bits (248), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 63/300 (21%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN--DSTITG 60
V V G+ D ++ W C + + + P Y S F N + T+
Sbjct: 90 QVDGLAIVGRGLLDGQG--KSWWDIHCRDHPGPNCICLAPTIYFSQMMTFSNCGNVTLKS 147
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
++ +S H+ ++G N+ ++D+KIT+ SPNT+GIHI SS I+HS IATGDDCV
Sbjct: 148 LRFRNSAQTHVLVMGSQNVYIDDIKITSPEASPNTDGIHITSSTAVSINHSDIATGDDCV 207
Query: 121 SL----------------GHGI--SVGSLGKGINDEEVVGLTVRNCTFTGT--------- 153
S+ GHG+ S+GSLG+G + V + V + FTGT
Sbjct: 208 SIGDQVNNLNVTFMNCGPGHGVRDSIGSLGRGGTEVTVENIRVSHVNFTGTTNGARIKTW 267
Query: 154 -------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN 200
+I ++V+NPI+IDQ Y C ++ V VR+ + GTSA
Sbjct: 268 PGGTGYVRGIEFFDIRFSSVQNPIIIDQFYGCAPTC-VETMKGVHIEKVRYMKMSGTSAT 326
Query: 201 K-----------IPCQNIGIGNINWV-YNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
K +PC N+ + +I+ +G++ +SLCS + G P +C
Sbjct: 327 KVAMKLECSGESVPCSNLFMRDIDLSPADGID------SVSSLCSFAHGSAQGIIRPLSC 380
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+GAV DGI DD+ AF+ AW +AC +V VP GK LN TG
Sbjct: 3 YGAVGDGIVDDTSAFQKAWEDACKGSSKMGSVNVPAGKVF-----LLNSLHFTG 51
>gi|357127466|ref|XP_003565401.1| PREDICTED: probable polygalacturonase At3g15720-like [Brachypodium
distachyon]
Length = 430
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 111/246 (45%), Gaps = 54/246 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ F N+ + I DS H+ + C + ++ + +TA ADSPNT+GI++G+S+
Sbjct: 183 LAFASCNNLWVRNIHLKDSPDKHMTLFRCSQVHVDSVSVTAPADSPNTDGINMGNSDHVY 242
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
IS TGDDCVS+ GHGISVGSLG V +TV NC+F
Sbjct: 243 ISSCSFQTGDDCVSILSGTTDVNVTNTTCGPGHGISVGSLGGANVIALVERITVSNCSFV 302
Query: 152 GT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
GT N+ V PI IDQ YCP C K V ++
Sbjct: 303 GTLTGVRIKSWQGGMGKANGFLFENLKMTAVRIPIDIDQFYCPQGNCPTK-DGGVSITDA 361
Query: 190 RFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
RF NI GTSA+K +PC+ I + ++ ++ N + + S N + T+
Sbjct: 362 RFVNIHGTSADKQAIQILCSQSVPCRGIYLDDVTLYWDKQNSQAQ-----SKVLNAEGTI 416
Query: 240 FGKQIP 245
G +P
Sbjct: 417 VGDVVP 422
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL---SIRFNFLNDSTI 58
++V DF A DG DD+ AF AW+ AC+ DG +++P G+ IRF S I
Sbjct: 63 YSVLDFHAAGDGKTDDAPAFLEAWQAACS-DGSSPILVIPGGRTFLLSKIRFQGSCKSPI 121
Query: 59 T 59
T
Sbjct: 122 T 122
>gi|297743439|emb|CBI36306.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 103/215 (47%), Gaps = 49/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F+F N+ I G+ ++S H+ + C L++L I A +SPNT+GI IG +
Sbjct: 249 ALGFSFCNNLQIYGLNVINSPSKHVKLFRCNGAILSNLNIKAPKESPNTDGIVIGECSQI 308
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ + I TGDDCV++ GHGIS+GSLG + V + V++C+F
Sbjct: 309 QVHDNNIGTGDDCVAILKGSSNINISRVACGPGHGISIGSLGMNGAYDTVEEIHVQDCSF 368
Query: 151 TGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
TGT I N ENPI+IDQ YCP C K S VK S+
Sbjct: 369 TGTQNGIRIKTWQGGSGYARKISFQGITLNAAENPIIIDQYYCPQLHCPNKT-SAVKVSD 427
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNIN 213
+ + ++GTS K + C NI + IN
Sbjct: 428 ISYAGVQGTSMTKTAINLRCSQSMACTNIELKRIN 462
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
FNV DFGA+ DG+ DDS+AF AW C + +++ K
Sbjct: 124 FNVLDFGAIGDGVTDDSQAFLKAWNAVCTARTTSAMLIIQRKK 166
>gi|356499681|ref|XP_003518665.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 473
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF ++ T+ G++ +S FH GC ++ + + ITA A SPNT+GIHI ++N
Sbjct: 210 VAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCESVHVESIYITAPALSPNTDGIHIENTND 269
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I +SVI+ GDDCVS+ GHGIS+GSLG + V +TVR+
Sbjct: 270 VRIYNSVISNGDDCVSIGAGCHDVDIKNITCGPGHGISIGSLGNHNSRACVSNITVRDSV 329
Query: 150 F----------------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +NI +V NPI+IDQ YC C+ K S V +
Sbjct: 330 IKVADNGVRIKTWQGGSGSVSGVTFSNIHMESVRNPIIIDQFYCLSKDCSNKT-SAVFVT 388
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
++ + NI+GT ++ +PC N+ + +I
Sbjct: 389 DIVYTNIKGTYDIRHPPMRFACSDSVPCTNLTLSDI 424
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
+F+V+ FGA+ DGI DD+++F+ AW AC + +LVP G F+F+ STI
Sbjct: 76 LFDVRTFGAIGDGITDDTESFKMAWDTACESESPVKVILVPQG------FSFVIQSTI 127
>gi|449436122|ref|XP_004135843.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
sativus]
gi|449491014|ref|XP_004158774.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase
At1g80170-like [Cucumis sativus]
Length = 371
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 95/191 (49%), Gaps = 38/191 (19%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I F+ + I + +DS+ H+ + C + ++LK+ A A SPNT+GIHI +S G
Sbjct: 107 AITFHKCKNLKIHHLLVIDSQQMHVALTSCLRVVASNLKVIAPAFSPNTDGIHISASKGV 166
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ +S+I+TGDDCVS+ GHGIS+GSLGK +V + V
Sbjct: 167 MVKNSIISTGDDCVSIVGNSSRILIKDITCGPGHGISIGSLGKRNTSAQVRNVRVDGAVL 226
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
+ T N++ NV NPI+IDQ YC N+ S VK +
Sbjct: 227 SNTKNGARIKTWQGGSGSATDIIFKNMLMKNVSNPIIIDQYYCDSNRPCANQTSAVKVED 286
Query: 189 VRFNNIRGTSA 199
+ F +I+GT+A
Sbjct: 287 ISFIHIKGTTA 297
>gi|356503952|ref|XP_003520763.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 462
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF ++ T+ G++ +S FH GC N+ + + ITA SPNT+GIHI ++N
Sbjct: 199 IAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCKNVHIESIYITAPKLSPNTDGIHIENTND 258
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
+I +SVI+ GDDCVS+ GHGIS+GSLG + V + VR+
Sbjct: 259 VKIYNSVISNGDDCVSIGSGCNDVDIKNITCGPGHGISIGSLGNHNSRACVSNIMVRDSF 318
Query: 149 -----------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T+ G +NI +V NPI+IDQ YC +C K S V S
Sbjct: 319 IKVTDNGVRIKTWQGGSGSVSGVTFSNIHMVSVRNPIIIDQFYCLTKECTNK-SSAVSVS 377
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
N+ + NI+GT ++ +PC N+ + +I
Sbjct: 378 NIIYTNIKGTYDIRSPPMRFACSDSVPCTNLTLSDI 413
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
+F+++ FGA+ DG DD+++F+ AW AC + + +LVP G F+FL STI
Sbjct: 65 IFDLRKFGAIGDGETDDTESFKMAWDSACQSESAVNVILVPQG------FSFLVQSTI 116
>gi|297802786|ref|XP_002869277.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315113|gb|EFH45536.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 332
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 110/235 (46%), Gaps = 50/235 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P + ++RF + G+ ++S HI+I GC N L++L + A A+SPNT+GI I
Sbjct: 44 PSRPEAVRFFGCQNLLYKGLTQINSPRNHISIFGCTNATLSNLHLIAPANSPNTDGIDIS 103
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S + S I TGDDCV++ GHGIS+GSLG+G E V + V
Sbjct: 104 HSQNIHVLSSTINTGDDCVAIKGASYDINITYVTCGPGHGISIGSLGQGGASEVVQNVNV 163
Query: 146 RNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ 183
R+CTF+GT NI N PI+IDQ Y +
Sbjct: 164 RHCTFSGTQNGARIKTWPGGRGFVKNILYENITLINANFPIIIDQQYHQSAGA-----TA 218
Query: 184 VKTSNVRFNNIRGTSAN----KIPCQNIGIGNINWVYNGVNVKVEGPET--TSLC 232
VK S+V F + +GTSA+ K+ C G N V + +N+ P T TS C
Sbjct: 219 VKVSDVTFKSFKGTSADATAIKLDCDPT-TGCDNIVMDHINIVSSSPRTPLTSYC 272
>gi|359482692|ref|XP_002266797.2| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 389
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 103/215 (47%), Gaps = 49/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F+F N+ I G+ ++S H+ + C L++L I A +SPNT+GI IG +
Sbjct: 143 ALGFSFCNNLQIYGLNVINSPSKHVKLFRCNGAILSNLNIKAPKESPNTDGIVIGECSQI 202
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
++ + I TGDDCV++ GHGIS+GSLG + V + V++C+F
Sbjct: 203 QVHDNNIGTGDDCVAILKGSSNINISRVACGPGHGISIGSLGMNGAYDTVEEIHVQDCSF 262
Query: 151 TGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
TGT I N ENPI+IDQ YCP C K S VK S+
Sbjct: 263 TGTQNGIRIKTWQGGSGYARKISFQGITLNAAENPIIIDQYYCPQLHCPNKT-SAVKVSD 321
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNIN 213
+ + ++GTS K + C NI + IN
Sbjct: 322 ISYAGVQGTSMTKTAINLRCSQSMACTNIELKRIN 356
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREAC 29
FNV DFGA+ DG+ DDS+AF AW C
Sbjct: 18 FNVLDFGAIGDGVTDDSQAFLKAWNAVC 45
>gi|18400876|ref|NP_566524.1| polygalacturonase [Arabidopsis thaliana]
gi|75311636|sp|Q9LW07.1|PGLR3_ARATH RecName: Full=Probable polygalacturonase At3g15720; Short=PG;
AltName: Full=Pectinase At3g15720; Flags: Precursor
gi|11994344|dbj|BAB02303.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332642197|gb|AEE75718.1| polygalacturonase [Arabidopsis thaliana]
Length = 456
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 50/211 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+++F N+ ++G+ +DS HI+I C + ++ L+I A SPNT+GI +G+S+
Sbjct: 140 ALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNV 199
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +IATGDDC+++ GHGIS+GSLGK V + V+NC F
Sbjct: 200 VIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNF 259
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIK--VPSQVKT 186
GT I +NVENPI+IDQ Y + N K S V+
Sbjct: 260 RGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEV 319
Query: 187 SNVRFNNIRGTS----------ANKIPCQNI 207
S V F+N GTS + ++PC I
Sbjct: 320 SKVVFSNFIGTSKSEYGVDFRCSERVPCTEI 350
>gi|357442133|ref|XP_003591344.1| Polygalacturonase [Medicago truncatula]
gi|355480392|gb|AES61595.1| Polygalacturonase [Medicago truncatula]
Length = 478
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 109/216 (50%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF ++ T+ G++ +S FH GC ++ + + ITA A SPNT+GIHI ++N
Sbjct: 215 VAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCQSVHVESIFITAPALSPNTDGIHIENTND 274
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I +SV++ GDDCVS+ GHGIS+GSLG + V +TVR+
Sbjct: 275 VKIYNSVVSNGDDCVSIGSGCYDVDIKNITCGPGHGISIGSLGNHNSRACVSNITVRDSV 334
Query: 150 F----------------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +NI + V+NPI+IDQ YC C+ K S V S
Sbjct: 335 IRVSDNGVRIKTWQGGSGSVSGVTFSNIHMDTVKNPIIIDQFYCLSKDCSNKT-SAVFVS 393
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
++ + +I+GT ++ IPC N+ + +I
Sbjct: 394 DIVYTSIKGTYDIRHPPMHFACSDSIPCTNLTLSDI 429
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
+ +V+ FGA+ DGI DD+++F+ AW AC + + + VPPG F+F+ STI
Sbjct: 80 LLDVRKFGAIGDGITDDTESFKMAWDTACQSELDLNVIFVPPG------FSFIVQSTI 131
>gi|326516452|dbj|BAJ92381.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 528
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 115/258 (44%), Gaps = 62/258 (24%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C D K P ++ + + G+ +++ H+ + ++L+ +
Sbjct: 234 WANSCKVDRSKPCKGAP----TAVTIDSCRGVRVRGLTIQNAQQMHLTVSRSRGVRLDGM 289
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
I A DSPNT+GIH+ S I+ + I TGDDCVS+ GHGIS+
Sbjct: 290 AIQAPGDSPNTDGIHVAESTAVTITGARIGTGDDCVSISNASFAVKMKGIVCDPGHGISI 349
Query: 129 GSLGKGINDEEVVGLT------------------------VRNCTFTGTNIVTNNVENPI 164
GSLG+G + V G+T VRN F TN++ + V++PI
Sbjct: 350 GSLGQGGSYAAVEGVTLDGARIARAQNGVRIKTWQGGAGYVRNVRF--TNVLVDAVDHPI 407
Query: 165 VIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINW 214
+IDQ YC + V SNV + NI GTS ++ +PC +I + NIN
Sbjct: 408 IIDQFYCDSRTPCANRSTNVAVSNVMYRNISGTSTRDEAIKLACSDAVPCSDIVLSNINL 467
Query: 215 VYNGVNVKVEGPETTSLC 232
+ + +G E ++C
Sbjct: 468 LGD------DGAEVQAVC 479
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLV 40
FGAV DG DD++AF AW +AC+ +K AVLV
Sbjct: 132 FGAVGDGCADDTEAFAKAWEKACS---LKDAVLV 162
>gi|2335094|gb|AAC02763.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 426
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 64/242 (26%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDST--ITGIKSVDSRYFHINILGCYNL 79
ET W+ +C + K+ F N + + +K +++ I+I C N+
Sbjct: 173 ETWWQNSCKRNKAKA-------------LTFYNSKSLIVKNLKVRNAQQIQISIEKCSNV 219
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------G 123
+++++ +TA ADSPNT+GIHI ++ +S S+I TGDDC+S+ G
Sbjct: 220 QVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPG 279
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVE 161
HGIS+GSLG + V G+TV +GT NI +NV+
Sbjct: 280 HGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVK 339
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
NPI+IDQ YC +KC + S V+ NV + +I GTSA++ PCQ I +
Sbjct: 340 NPIIIDQDYCDKSKCTTE-KSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDR 398
Query: 212 IN 213
+N
Sbjct: 399 VN 400
Score = 42.0 bits (97), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+V DFGA DG DD++AF AW++AC+ +G + +LVP G
Sbjct: 69 SVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVN-LLVPKG 108
>gi|147667130|gb|ABQ45847.1| polygalacturonase, partial [Citrus unshiu]
Length = 213
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 56/215 (26%)
Query: 84 LKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGIS 127
+K++A DSPNT+GIH+ +S+G I S I TGDDCVS+ GHGIS
Sbjct: 3 VKVSAAGDSPNTDGIHVQASSGVTILDSKIGTGDDCVSVGPGATNLWIENVACGPGHGIS 62
Query: 128 VGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPI 164
+GSLGK V +T + TFTGT + + NNV+NPI
Sbjct: 63 IGSLGKEQQKAGVQNVTATSVTFTGTQNGVRIKSWGRTSSGFARNILFQHALMNNVDNPI 122
Query: 165 VIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINW 214
+IDQ YCP N S VK S+V + +I GTSA ++ PC I + ++
Sbjct: 123 IIDQNYCPDNGNCPGQASGVKISDVIYQDIHGTSATEVGVKLDCSSKNPCTGISLEDVKL 182
Query: 215 VYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
YN N E + C+N + G +P +C+
Sbjct: 183 SYN--NQPAE-----ASCTNADGSASGVVLPNSCL 210
>gi|19310405|gb|AAL84942.1| At2g41850/T11A7.5 [Arabidopsis thaliana]
Length = 433
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 115/242 (47%), Gaps = 57/242 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDST--ITGIKSVDSRYFHINILGCYNL 79
ET W+ +C + K P F N + + +K +++ I+I C N+
Sbjct: 173 ETWWQNSCKRNKAKPCTXAPTA------LTFYNSKSLIVKNLKVRNAQQIQISIEKCSNV 226
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------G 123
+++++ +TA ADSPNT+GIHI ++ +S S+I TGDDC+S+ G
Sbjct: 227 QVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPG 286
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVE 161
HGIS+GSLG + V G+TV +GT NI +NV+
Sbjct: 287 HGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVK 346
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
NPI+IDQ C KC + S V+ NV + +I GTSA++ PCQ I +
Sbjct: 347 NPIIIDQDDCDKGKCTTE-KSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDR 405
Query: 212 IN 213
+N
Sbjct: 406 VN 407
Score = 42.0 bits (97), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+V DFGA DG DD++AF AW++AC+ +G + +LVP G
Sbjct: 69 SVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVN-LLVPKG 108
>gi|357475199|ref|XP_003607885.1| hypothetical protein MTR_4g084050 [Medicago truncatula]
gi|85719349|gb|ABC75354.1| Glycoside hydrolase, family 28 [Medicago truncatula]
gi|355508940|gb|AES90082.1| hypothetical protein MTR_4g084050 [Medicago truncatula]
Length = 394
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 141/361 (39%), Gaps = 128/361 (35%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS-------------- 47
FNV +GA DG DDS AF AW++ C +++P G+
Sbjct: 23 FNVVKYGAKGDGHTDDSNAFTNAWQDVCGSTRDTPTLIIPEGQNFMLQPLSFQGPCKSTT 82
Query: 48 ----------------------------IRFNFLNDSTITGIKSVDS------------R 67
I+F+ +N I G +VD R
Sbjct: 83 ISVKIMGTITAPQSNANWKWDDNDGDYWIKFSNINGLIINGGGTVDGQGDSWWNNNGHIR 142
Query: 68 YFHINILGCYNLKLNDLK-----------------------ITAHADSPNTEGIHIGSSN 104
+ IL C NLKL LK I A DSPNT+GI I +S
Sbjct: 143 PTALKILECDNLKLGPLKHINSPRNHISIVGCNDALISNLHIIAPKDSPNTDGIDISTST 202
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
+ HS+I+TGDDC+++ GHGISVGSLGK + V + V N
Sbjct: 203 NISVQHSIISTGDDCIAINNGTEFIYITDIQCGPGHGISVGSLGKDGDYSTVEEIHVSNI 262
Query: 149 TFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIK------V 180
TF T +I+ VENP++IDQ Y K V
Sbjct: 263 TFRETTNGARIKTWTGGSGYARKITYEDIIVFKVENPVIIDQQYDALEPLKTKYNVLEGV 322
Query: 181 PSQVKTSNVRFNNIRGTSANK----IPCQNIGIGNINWVYNGVN-VKVEGPETTSLCSNV 235
VK S+V F NIRGT+ K + C IG NI + ++ V ++G + ++ C++V
Sbjct: 323 SKAVKVSDVIFRNIRGTTNGKDAIDLNCARIGCTNI--ILEDIDIVDLDGKKASASCNSV 380
Query: 236 K 236
+
Sbjct: 381 Q 381
>gi|388519421|gb|AFK47772.1| unknown [Medicago truncatula]
Length = 425
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + +++GI +S+ H+ C N+++ D+ ++ DSPNT+GIH
Sbjct: 158 LPKTKPTALRFYGSDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIH 217
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S IS S ++ GDDCVS+ GHGIS+GSLGK V +
Sbjct: 218 LQNSQDVVISGSTLSCGDDCVSIQTGCSNILVHNVNCGPGHGISIGSLGKENTKACVSNV 277
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T NI ++V+ PI+IDQ YC KC V
Sbjct: 278 TVRDVTLQNTLTGVRIKTWQGGSGSVQNIMFSNIQVSDVKTPIMIDQFYCDGGKCR-NVT 336
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V S++ + N+ GT ++ +PC+ I + I
Sbjct: 337 SAVAVSSIHYTNVHGTYTKEPIYFACSDSLPCKGITLDTI 376
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV DFGA DG DD+KAFE AW AC + S ++VP G ++
Sbjct: 45 FNVLDFGAKGDGHSDDTKAFEDAWAAACKMEA--STMVVPSGSVFLVK 90
>gi|357495809|ref|XP_003618193.1| Polygalacturonase [Medicago truncatula]
gi|355493208|gb|AES74411.1| Polygalacturonase [Medicago truncatula]
Length = 425
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 106/220 (48%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + +++GI +S+ H+ C N+++ D+ ++ DSPNT+GIH
Sbjct: 158 LPKTKPTALRFYGSDGVSVSGITIQNSQQTHLKFDSCTNVQVFDITTSSPGDSPNTDGIH 217
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S IS S ++ GDDCVS+ GHGIS+GSLGK V +
Sbjct: 218 LQNSQDVVISGSTLSCGDDCVSIQTGCSNILVHNVNCGPGHGISIGSLGKENTKACVSNV 277
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T NI ++V+ PI+IDQ YC KC V
Sbjct: 278 TVRDVTLQNTLTGVRIKTWQGGSGSVQNIMFSNIQVSDVKTPIMIDQFYCDGGKCR-NVT 336
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V S++ + N+ GT ++ +PC+ I + I
Sbjct: 337 SAVAVSSIHYTNVHGTYTKEPIYFACSDSLPCKGITLDTI 376
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV DFGA DG DD+KAFE AW AC + S ++VP G ++
Sbjct: 45 FNVLDFGAKGDGHSDDTKAFEDAWAAACKMEA--STMVVPSGSVFLVK 90
>gi|356536665|ref|XP_003536857.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 475
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 107/216 (49%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF ++ T+ G++ +S FH GC ++ + + ITA A SPNT+GIHI ++N
Sbjct: 212 VAIRFFMSSNLTVQGLRIKNSPQFHFRFDGCESVHVESIYITAPALSPNTDGIHIENTND 271
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I +SVI+ GDDCVS+ GHGIS+GSLG + V +TVR+
Sbjct: 272 VRIYNSVISNGDDCVSIGAGCHDVDIKNITCGPGHGISIGSLGNHNSRACVSNITVRDSV 331
Query: 150 F----------------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T +NI +V NPI++DQ YC C+ K S V +
Sbjct: 332 IKVSDNGVRIKTWQGGAGSVSGVTFSNIHMESVRNPIIVDQFYCLSKDCSNKT-SAVFVT 390
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
++ + NI+GT ++ +PC N+ + +I
Sbjct: 391 DIVYANIKGTYDIRHPPMRFACSDSVPCTNLTLSDI 426
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 6/58 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
+F+V+ FGA+ DGI DD+++F+ AW AC + +LVP G F+F+ STI
Sbjct: 78 LFDVRTFGAIGDGITDDTESFKMAWDTACQSESPVKVILVPQG------FSFVIQSTI 129
>gi|357462819|ref|XP_003601691.1| Polygalacturonase [Medicago truncatula]
gi|355490739|gb|AES71942.1| Polygalacturonase [Medicago truncatula]
Length = 404
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 117/230 (50%), Gaps = 52/230 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++RF T++ + ++S HI++ C N + ++ ITA SPNT+GI I S
Sbjct: 157 ALRFLDCQALTLSNLNHMNSPKNHISVDSCKNASIFNIHITAPPTSPNTDGIDISQSTNI 216
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +S I TGDDC+++ GHGISVGSLGK + V + V+NCTF
Sbjct: 217 AIMNSTIETGDDCIAINNGSSVITITGTFCGPGHGISVGSLGKDNSYATVEDVRVQNCTF 276
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
TGT +I+ N V+NP++IDQ Y P S V+ S+
Sbjct: 277 TGTSNGGRIKTFEGGSGYARNITYEDIILNEVKNPVIIDQAYNP------NADSAVEISD 330
Query: 189 VRFNNIRGTS----ANKIPCQ-NIGIGNINWVYNGVNV-KVEGPETTSLC 232
V ++NIRGTS A ++ C+ NIG NI V + +N+ + +G + +C
Sbjct: 331 VTYSNIRGTSVGEYAIELKCELNIGCNNI--VLDHINITRADGGKAGVVC 378
>gi|302805520|ref|XP_002984511.1| hypothetical protein SELMODRAFT_44337 [Selaginella moellendorffii]
gi|300147899|gb|EFJ14561.1| hypothetical protein SELMODRAFT_44337 [Selaginella moellendorffii]
Length = 388
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 64/298 (21%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIK 62
V +F V G D + W ++C + + P ++ F + G+
Sbjct: 98 RVTNFRLVGTGTIDGKG--QNWWMQSCKRNVNEPCRRAP----TALTFRHCQHVEVDGLT 151
Query: 63 SVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL 122
+S+ H+++ C N L L +++ DSPNT+GIH+ S I + I+TGDDC+S+
Sbjct: 152 ITNSQQMHLDLSSCSNAVLRHLTVSSPEDSPNTDGIHLERSESVSIVQTTISTGDDCISI 211
Query: 123 ----------------GHGISVGSLGKGIND-EEVVGLTVRNC----------------- 148
GHGIS+GSLGK + V + VRN
Sbjct: 212 GPGTSHVVIEDVSCGPGHGISIGSLGKKRQSFDRVSHVKVRNAFLRDTQNGLRIKTWEGG 271
Query: 149 -----TFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPS--QVKTSNVRFNNIRGTSANK 201
F +I V+NPI+IDQ YC + P ++ SNV++++I+G+SA++
Sbjct: 272 RGWAHDFVFEHITMLRVKNPILIDQYYCDHEHSGTCTPKRRELLISNVKYSDIKGSSASQ 331
Query: 202 I----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ PC I + ++ Y + + +S C N + +P TC+
Sbjct: 332 VAVMFRCNPTNPCHKISLDDVALQY-------KNSQASSFCQNAYGSSARYVLPPTCL 382
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSA-VLVPPGK-YL 46
VF+V DFGA+ +GI +D+++F + W+ AC KS+ +LVP GK YL
Sbjct: 7 VFSVDDFGAIGNGIANDTQSFISTWQRACRQRKNKSSMMLVPSGKVYL 54
>gi|2660667|gb|AAC79138.1| putative polygalacturonase [Arabidopsis thaliana]
Length = 381
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 119/243 (48%), Gaps = 49/243 (20%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+ + F ND I GI S +S HI+I C ++L +K+ A DSPNT+GI+I S+
Sbjct: 134 WKQLHFQRCNDLKIIGITSFNSPRNHISISECKRVQLTKIKLVAPEDSPNTDGINISGSS 193
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
++ + I TGDDCV++ GHGISVGSLG+ + V + V NC
Sbjct: 194 DVDVYDTFIGTGDDCVAINNGSVNINITRMNCGPGHGISVGSLGRDGEESIVENVQVTNC 253
Query: 149 TFTGT-----------------NIVTNNV-----ENPIVIDQLYCPYNKCNIKVPSQVKT 186
TF T NI+ ++ +NPI+IDQ Y + +++ S V
Sbjct: 254 TFFRTDNGVRIKTWPNGKGYARNILFKDLTFRESKNPIIIDQNYVDKGRLDVE-ESAVAI 312
Query: 187 SNVRFNNIRGTSAN----KIPCQNIGIGNINWVYNGVNVK-VEGPETTSLCSNVKPTLFG 241
SNV F +IRGTS KI C + + V + +++ V+G + CSNV +G
Sbjct: 313 SNVTFTDIRGTSQRNEIIKIDCSEVTYCK-DIVLDKIDIATVDGNKPVVECSNV----YG 367
Query: 242 KQI 244
K I
Sbjct: 368 KSI 370
>gi|297834448|ref|XP_002885106.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330946|gb|EFH61365.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 104/216 (48%), Gaps = 50/216 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+++F N+ ++G+ VDS HI+I C + ++ L+I A SPNT+GI +GSS+
Sbjct: 140 ALKFKSCNNLRLSGLTHVDSPMAHIHINDCNYVTISSLRINAPESSPNTDGIDVGSSSNV 199
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I VI TGDDC+++ GHGIS+GSLGK V + V+NC F
Sbjct: 200 VIQDCVIGTGDDCIAINSGTSNIRISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNF 259
Query: 151 TGTN----------------------IVTNNVENPIVIDQLY--CPYNKCNIKVPSQVKT 186
GT I +NVENPI+IDQLY +K S V+
Sbjct: 260 RGTTNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQLYNGGDSDKAKDHKSSAVEV 319
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNI 212
S V ++N GTS ++ +PC I + ++
Sbjct: 320 SKVVYSNFIGTSKSEYGVDFRCSETVPCTEIFLRDV 355
>gi|47606048|sp|Q9FY19.1|PGLR2_JUNAS RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Major
pollen allergen Jun a 2; AltName: Full=Pectinase;
AltName: Allergen=Jun a 2; Flags: Precursor
gi|9955725|emb|CAC05582.1| pollen major allergen 2 protein [Juniperus ashei]
Length = 507
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 98/218 (44%), Gaps = 48/218 (22%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G+ +I+ +F T+ + +S FH+ C +K+ +KI A DSPNT+GI I +
Sbjct: 182 GRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFA 241
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S EI I TGDDCV++ GHG+S+GSLGKG + EV + +
Sbjct: 242 SKRFEIEKCTIGTGDDCVAVGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEVSFVHLD 301
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
F T N+ N ENPI+I+Q YC S V
Sbjct: 302 GAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAV 361
Query: 185 KTSNVRFNNIRGTSA----------NKIPCQNIGIGNI 212
K +V F NI GTSA + +PC NI + N+
Sbjct: 362 KIQDVTFKNIHGTSATTAAIQLMCSDSVPCSNIKLSNV 399
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI-----------R 49
VFNV+ +GAV DG D + AFE W ACN + + LVP K +
Sbjct: 59 VFNVEHYGAVGDGKHDSTDAFEKTWNAACN--KLSAVFLVPANKKFVVNNLVFYGPCQPH 116
Query: 50 FNFLNDSTITG 60
F+F D TI
Sbjct: 117 FSFKVDGTIAA 127
>gi|302791651|ref|XP_002977592.1| hypothetical protein SELMODRAFT_417452 [Selaginella moellendorffii]
gi|300154962|gb|EFJ21596.1| hypothetical protein SELMODRAFT_417452 [Selaginella moellendorffii]
Length = 804
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 33/181 (18%)
Query: 65 DSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL-- 122
DS+ FH+++ C + + L++ A +DSPNT+GIHI S + ++I TGDDC+S+
Sbjct: 527 DSQEFHLSVESCNEVYMTGLQVVAPSDSPNTDGIHIVRSENVYLQDTLIGTGDDCISIQT 586
Query: 123 --------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------NIVTNNVE 161
GHG+S+G LGK + V G+ V++ TG ++ N+V
Sbjct: 587 GSYNIYIERVTCGPGHGVSIGGLGKYDSWACVAGVYVKDLGGTGVVRDVHFESVTMNDVA 646
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGN 211
P++I+Q YC V+ +V F NIRGTS ++ +PCQNI + +
Sbjct: 647 FPVIINQFYCDSVLPCENQTDAVQVHDVYFKNIRGTSRTDFSVYLACSDTVPCQNIFLQD 706
Query: 212 I 212
+
Sbjct: 707 V 707
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V FGA+ DG DDS+AF +AW AC + S+ ++ P Y
Sbjct: 394 VFDVTSFGALGDGETDDSQAFLSAWEAACF---VPSSTVLFPATY 435
>gi|302782539|ref|XP_002973043.1| hypothetical protein SELMODRAFT_54363 [Selaginella moellendorffii]
gi|300159644|gb|EFJ26264.1| hypothetical protein SELMODRAFT_54363 [Selaginella moellendorffii]
Length = 392
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 64/298 (21%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIK 62
V +F V G D + W ++C + + P ++ F + G+
Sbjct: 102 RVTNFRLVGTGTIDGKG--QNWWMQSCKRNVNEPCRRAP----TALTFRHCQHVEVDGLT 155
Query: 63 SVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL 122
+S+ H+++ C N L L +++ DSPNT+GIH+ S I + I+TGDDC+S+
Sbjct: 156 ITNSQQMHLDLSSCSNAVLRHLTVSSPEDSPNTDGIHLERSESVSIVQTTISTGDDCISI 215
Query: 123 ----------------GHGISVGSLGKGIND-EEVVGLTVRNC----------------- 148
GHGIS+GSLGK + V + VRN
Sbjct: 216 GPGTSHVVIEDVSCGPGHGISIGSLGKKRQSFDRVSHVKVRNAFLRDTQNGLRIKTWEGG 275
Query: 149 -----TFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQ--VKTSNVRFNNIRGTSANK 201
F +I V+NPI+IDQ YC + P + + SNV++++I+G+SA++
Sbjct: 276 RGWAHDFVFEHITMLRVKNPILIDQYYCDHEHSGTCTPKRRGLLISNVKYSDIKGSSASQ 335
Query: 202 I----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ PC I + ++ Y + + +S C N + +P TC+
Sbjct: 336 VAVMFRCNPTNPCHKISLDDVALQY-------KNSQASSFCQNAYGSSARYVLPPTCL 386
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%), Gaps = 2/48 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSA-VLVPPGK-YL 46
VF+V DFGA+ +GI +D+++F + W+ AC KS+ +LVP G+ YL
Sbjct: 11 VFSVDDFGAIGNGIANDTQSFISTWQRACRQRKNKSSMMLVPSGQVYL 58
>gi|350536629|ref|NP_001234256.1| polygalacturonase [Solanum lycopersicum]
gi|7381227|gb|AAF61444.1|AF138858_1 polygalacturonase [Solanum lycopersicum]
Length = 452
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 118/295 (40%), Gaps = 60/295 (20%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
F VK GI D + W +C + P ++ F+ N+ + I
Sbjct: 150 FKVKHLTVEGGGIIDGMG--QEWWARSCKVNRTNPCHHAP----TALTFHKCNNLKVKNI 203
Query: 62 KSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
K +S+ H+ GC ++ ++ L + A DSPNT+ IHI SS + +I TGDDC+S
Sbjct: 204 KIFNSQQMHLAFTGCKHVTISQLVVKAPGDSPNTDAIHISSSTQVNVKDCIIGTGDDCIS 263
Query: 122 L----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------ 153
+ GHGIS+GSLGK + +V + V + + T
Sbjct: 264 IVGNSSRIKVKDIVCGPGHGISIGSLGKSNSFSQVYNVHVNGASISNTENGVRIKTWQGG 323
Query: 154 ----------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA---- 199
N+ NV NPI+IDQ YC K S + N+ F I+GTSA
Sbjct: 324 SGFVKKVSFENVWMENVSNPIIIDQYYCDSRKPCSNKTSNIHIDNISFMGIKGTSATERA 383
Query: 200 ------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
+ PC+ + + +I + G TT C T G P C
Sbjct: 384 ITLACSDSFPCRRLYLEDIQLTSS------SGDPTTFFCWQAYGTTSGLNYPPPC 432
Score = 43.5 bits (101), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+F V DFGA DGI DD+K+F+ W AC+ + +++P G +R
Sbjct: 62 LFRVNDFGATGDGITDDTKSFKDVWDMACS-SPSHAKIVIPAGYSFLVR 109
>gi|296084983|emb|CBI28398.3| unnamed protein product [Vitis vinifera]
Length = 105
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/105 (47%), Positives = 68/105 (64%), Gaps = 15/105 (14%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IP 203
+IV NNV NPI+IDQ YCP+N+CN+K+PS++ SNV F NIRGT++ + +P
Sbjct: 5 DIVMNNVGNPIIIDQEYCPHNQCNLKIPSRIMLSNVSFRNIRGTTSTQVAVKLVCSQGVP 64
Query: 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
C++ +G+IN YNG KV S C N+KP L G Q+P TC
Sbjct: 65 CEDAELGDINLKYNG---KVG--HAMSQCKNIKPNLLGTQLPRTC 104
>gi|255548940|ref|XP_002515526.1| Polygalacturonase-2 precursor, putative [Ricinus communis]
gi|223545470|gb|EEF46975.1| Polygalacturonase-2 precursor, putative [Ricinus communis]
Length = 395
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 123/257 (47%), Gaps = 55/257 (21%)
Query: 32 DGIKSAVLVPP--GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 89
DG SA P ++ F+ ++ + G+ ++S HI+I C + ++ L I A
Sbjct: 130 DGQGSAWWTHPRSNHLKALHFSQCDNLILRGLTHINSPRNHISINSCIGVIISHLNIIAP 189
Query: 90 ADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLG- 132
+SPNT+GI I S+ +I S I+TGDDCV++ GHGISVGSLG
Sbjct: 190 KESPNTDGIDISRSSYVKIRDSNISTGDDCVAVNGNSSYIRIINVVCGPGHGISVGSLGA 249
Query: 133 KGIND--EEVVGLTVRNCTF----------------------TGTNIVTNNVENPIVIDQ 168
KG+ D EEV VRNCTF + T I ENP++IDQ
Sbjct: 250 KGLTDTVEEV---HVRNCTFNRTQNGVRIKTWQGGQGFARKISFTQITLIASENPVIIDQ 306
Query: 169 LYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----IPCQNIGIGNINWVYNGVNVKVE 224
YC + + V SNV +++I+GTSA K + C IG NI V N + +
Sbjct: 307 YYCDGEQNCKNGTTAVAVSNVIYSDIKGTSAQKEAIRLDCSEIGCTNI--VMNRIYIAPS 364
Query: 225 GP---ETTSLCSNVKPT 238
P +T + C NV+ T
Sbjct: 365 APLVHQTEAYCQNVRGT 381
>gi|297734026|emb|CBI15273.3| unnamed protein product [Vitis vinifera]
Length = 393
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 111/241 (46%), Gaps = 56/241 (23%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
N +TG+ ++ + H+ C + ++++ I A DSPNT+GIH+ S I I
Sbjct: 152 NKVQLTGLSFRNNPHMHVVFDSCDMVHISNVSIDAPGDSPNTDGIHLKESTHVNIEFCSI 211
Query: 114 ATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---- 153
TGDDC+S+ GHGIS+GS+G+ E V + V + F G+
Sbjct: 212 RTGDDCISIVDKCSNITIQNIECGPGHGISIGSMGQYGAYETVENIYVSDVQFKGSLSGV 271
Query: 154 ------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIR 195
I + N + PI IDQ YCP+ KC+ + + V+ S++ + +I+
Sbjct: 272 RIKTWQGGKGHARKMVFKGITSLNTQYPIQIDQFYCPHAKCDEQADA-VEISDISYIDIK 330
Query: 196 GTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
GTS K +PC+NI + +IN Y G N ++ C NV T G P
Sbjct: 331 GTSMRKTAVKLACSESVPCKNIFMQDINLSYQGTNA-------SAYCKNVNGTSQGIMEP 383
Query: 246 A 246
+
Sbjct: 384 S 384
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACN 30
VF+V +GA+ +G DDS AF AW + CN
Sbjct: 25 VFDVTQYGAIGNGSTDDSPAFMLAWTDVCN 54
>gi|224143124|ref|XP_002324855.1| predicted protein [Populus trichocarpa]
gi|222866289|gb|EEF03420.1| predicted protein [Populus trichocarpa]
Length = 399
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 110/227 (48%), Gaps = 46/227 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F +D ++G+ VDS HI I C + +++L I A +SPNT+GI + S
Sbjct: 150 ALNFEKCDDLQLSGLTHVDSPKGHIGITDCNGVLISNLNIAAPENSPNTDGIDMARSTNV 209
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I S+IATGDDCV++ GHGISVGSLGK + V + VRNC+F
Sbjct: 210 HIQDSMIATGDDCVAINGGCSYINITNIACGPGHGISVGSLGKDGQYDTVEEVHVRNCSF 269
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCP-YNKCNIKVPSQVKTS 187
TGT I +NPI+IDQ YC N C + ++ S
Sbjct: 270 TGTQNAARIKTWQGGSGYARKISYEQITLVASKNPIIIDQYYCDGVNNCR-NSSTALQVS 328
Query: 188 NVRFNNIRGTSAN----KIPCQNIGIGNINWVYNGVNVKVEGPETTS 230
+V ++ +GTS + ++ C + G IN V + +N+ P T+
Sbjct: 329 DVTYSGFQGTSVDEEAIRLDCSDRGC--INIVMDNINITSLDPGKTT 373
>gi|297611569|ref|NP_001067620.2| Os11g0249400 [Oryza sativa Japonica Group]
gi|222615795|gb|EEE51927.1| hypothetical protein OsJ_33540 [Oryza sativa Japonica Group]
gi|255679960|dbj|BAF27983.2| Os11g0249400 [Oryza sativa Japonica Group]
Length = 419
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 120/310 (38%), Gaps = 71/310 (22%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
VF D +VA G D A R A D PP S+ + + G
Sbjct: 118 VFQDVDGVSVAGGTLDGRGRALWACRRARRPD-------CPPATR-SLTIYRSRNVAVRG 169
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
+ S DS HI + + + D ++A SPNT+GIHI S G + ++VI TGDDCV
Sbjct: 170 LTSRDSAGIHITVQASAGVAIVDTVVSAPGRSPNTDGIHIKQSTGVTVRNAVIGTGDDCV 229
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN---------- 154
S+ GHGIS+GSLG V +TV+ GT
Sbjct: 230 SMVEGSSDVLIEAVTCGPGHGISIGSLGDTPEQVAVRNITVKGAALAGTTNGLRIKTWAK 289
Query: 155 -------------IVTNNVENPIVIDQLYCPYNK-----------CNIKVPSQVKTSNVR 190
+V NV NPI++DQ YCP N C++ S ++ S V
Sbjct: 290 ANAGAVAGVSFSGVVMRNVSNPIIVDQNYCPGNASCPTEARSPETCDLG--SGIEISGVS 347
Query: 191 FNNIRGTSANKI----------PCQNIGIGNINWVY-NGVNVKVEGPETTSLCSNVKPTL 239
+ +I GTSA PC I + ++ Y E S C N
Sbjct: 348 YTDIEGTSATATAVRFDCSPSRPCAGIAMRDVRLRYQPPAAAAEEEQPAASFCRNAHGVA 407
Query: 240 FGKQIPATCV 249
FG P +C+
Sbjct: 408 FGDVDPPSCL 417
>gi|15241590|ref|NP_199296.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|9758387|dbj|BAB08836.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332007783|gb|AED95166.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 332
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 119/243 (48%), Gaps = 49/243 (20%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+ + F ND I GI S +S HI+I C ++L +K+ A DSPNT+GI+I S+
Sbjct: 85 WKQLHFQRCNDLKIIGITSFNSPRNHISISECKRVQLTKIKLVAPEDSPNTDGINISGSS 144
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
++ + I TGDDCV++ GHGISVGSLG+ + V + V NC
Sbjct: 145 DVDVYDTFIGTGDDCVAINNGSVNINITRMNCGPGHGISVGSLGRDGEESIVENVQVTNC 204
Query: 149 TFTGT-----------------NIVTNNV-----ENPIVIDQLYCPYNKCNIKVPSQVKT 186
TF T NI+ ++ +NPI+IDQ Y + +++ S V
Sbjct: 205 TFFRTDNGVRIKTWPNGKGYARNILFKDLTFRESKNPIIIDQNYVDKGRLDVE-ESAVAI 263
Query: 187 SNVRFNNIRGTSAN----KIPCQNIGIGNINWVYNGVNVK-VEGPETTSLCSNVKPTLFG 241
SNV F +IRGTS KI C + + V + +++ V+G + CSNV +G
Sbjct: 264 SNVTFTDIRGTSQRNEIIKIDCSEVTYCK-DIVLDKIDIATVDGNKPVVECSNV----YG 318
Query: 242 KQI 244
K I
Sbjct: 319 KSI 321
>gi|118197959|gb|ABK78768.1| putative allergen Cup a 2 variant 1 [Hesperocyparis arizonica]
Length = 384
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 99/218 (45%), Gaps = 48/218 (22%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G+ +I+ +F T+ + ++S FH+ C +K+ +KI A +SPNT+GI I
Sbjct: 129 GRPTAIKIDFSKSVTVKELTLMNSPEFHLVFGECDGVKIQGIKIKAPKESPNTDGIDIFG 188
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S EI +I TGDDCV++ GHG+S+GSLGKG + EV + +
Sbjct: 189 SKRFEIEKCIIGTGDDCVAIGTGSSNITITDLTCGPGHGMSIGSLGKGNSRSEVSFVHLD 248
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
F T N+ N ENPI+I+Q YC S V
Sbjct: 249 GAKFIDTQNGLRIKTWQGGSGLASHITYENVEMVNAENPILINQFYCTSAAACENQRSAV 308
Query: 185 KTSNVRFNNIRGTSA----------NKIPCQNIGIGNI 212
K +V F NI GTSA + +PC NI + N+
Sbjct: 309 KIEDVTFKNIHGTSATAAAIQLMCSDSVPCSNIKLSNV 346
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
VFNV+ GAV DG D + AFE W EAC + + LVP K +
Sbjct: 6 VFNVEHHGAVGDGNHDSTDAFEKTWNEACK--TLSAVFLVPANKKFVV 51
>gi|224058683|ref|XP_002299601.1| predicted protein [Populus trichocarpa]
gi|222846859|gb|EEE84406.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 110/250 (44%), Gaps = 54/250 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I F+ D + +K V + H+ C + +L +T+ A SPNT+GIHI +S+G
Sbjct: 184 AITFHKCKDLKVENLKVVCGQKMHVAFTNCLRVMTFNLIVTSPAVSPNTDGIHISASHGV 243
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKG-----INDEEVVGLTV 145
+I SV+ TGDDC+S+ GHGIS+GSLGK + D V G +
Sbjct: 244 KIKDSVVRTGDDCISIVSNSSRIKIRNIACGPGHGISIGSLGKSNSSSLVRDVMVDGAFL 303
Query: 146 RN-----------------CTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
N T NI NV NPI+IDQ YC + S VK N
Sbjct: 304 SNTDNGVRIKTWQGGGGNATNITFQNIFMENVSNPIIIDQYYCDAHVPCANQTSAVKVEN 363
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
+ F I+GTSA + +PC+ + + ++ + + G T S C +
Sbjct: 364 ISFRRIKGTSATEEAIKFACSDDLPCKGLYLEDVQL------LSLTGGTTRSFCWQAYGS 417
Query: 239 LFGKQIPATC 248
G P+ C
Sbjct: 418 SRGLVHPSPC 427
>gi|15241460|ref|NP_196969.1| polygalacturonase [Arabidopsis thaliana]
gi|7573314|emb|CAB87632.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|332004675|gb|AED92058.1| polygalacturonase [Arabidopsis thaliana]
Length = 435
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 104/220 (47%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF N T++GI +S H+ C +++++D ++ DSPNT+GIH
Sbjct: 166 MPRTKPTALRFYGSNGVTVSGITIQNSPQTHLKFDNCISIQVSDFTTSSPGDSPNTDGIH 225
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S + I S +A GDDC+S+ GHGIS+G LGK V +
Sbjct: 226 LQNSQDAVIYRSTLACGDDCISIQTGCSNINIHDVDCGPGHGISIGGLGKDNTKACVSNI 285
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T NI +NV NPI+IDQ YC C+ +
Sbjct: 286 TVRDVTMHETTNGVRIKSWQGGSGSVKQVMFSNIQVSNVANPIIIDQYYCDGGGCHNET- 344
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V SN+ + NI+GT ++ +PC I + I
Sbjct: 345 SAVAVSNINYINIKGTYTKEPVRFACSDSLPCTGISLSTI 384
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNFL 53
NV D GA DG DD+KAFE AW+ AC S +LVP G +L +FL
Sbjct: 51 INVLDHGAKGDGTSDDTKAFEDAWQVACKV--AASTLLVPSGSTFLVGPVSFL 101
>gi|15231579|ref|NP_189293.1| putative polygalacturonase / pectinase [Arabidopsis thaliana]
gi|1402880|emb|CAA66811.1| polygalacturonase-like protein [Arabidopsis thaliana]
gi|9293940|dbj|BAB01843.1| polygalacturonase [Arabidopsis thaliana]
gi|26450320|dbj|BAC42276.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332643664|gb|AEE77185.1| putative polygalacturonase / pectinase [Arabidopsis thaliana]
Length = 470
Score = 97.8 bits (242), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 126/259 (48%), Gaps = 55/259 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+PP K ++RF N+ T+ I V+S H+ +K+N++ I++ +SPNT+GIH
Sbjct: 188 IPPMKPTALRFYSSNNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNTDGIH 247
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG-----INDE 138
+ ++ EI HS IA GDDCVS+ GHGIS+G LGK ++D
Sbjct: 248 LQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGKDKSVACVSDI 307
Query: 139 EVVGLTVRNCT-----------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
V ++++N T +NI +V+ PIVIDQ YC +KC +
Sbjct: 308 IVEDISIQNTLAGVRIKTWQGGLGVVKNLTFSNIQVKDVKVPIVIDQYYCDKSKCKNQTR 367
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNINWVYNGVNVKVEGPET---- 228
+ V S V++NNI G+ +N +PC ++ + +I +G + G +T
Sbjct: 368 A-VSISGVKYNNIVGSFTVQPVRIACSNNVPCMDVDLMDIRLRPSG---GIRGLQTHQQQ 423
Query: 229 TSLCSNVKPTLFGKQIPAT 247
+LC N G +P++
Sbjct: 424 QALCWNSYGKTQGPLVPSS 442
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
VFN+ +GA DG+ DDSKA AW+ AC G K V +P G ++
Sbjct: 66 VFNIFSYGAKGDGVSDDSKALVGAWKAACKVVGGK--VEIPAGTQFLVK 112
>gi|4558558|gb|AAD22651.1|AC007138_15 putative polygalacturonidase [Arabidopsis thaliana]
gi|7268573|emb|CAB80682.1| putative polygalacturonidase [Arabidopsis thaliana]
Length = 452
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 110/223 (49%), Gaps = 51/223 (22%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P + ++RF ++ + G+ +S H+ + GC+ + +N L+I + SPNT+GIH
Sbjct: 179 LPCKPHQALRFFMSSNVIVKGLSIKNSPQVHLKLDGCHVVHINSLRIISPPASPNTDGIH 238
Query: 100 IGSSNGSEISHSVIATGDDCVSL-----------------GHGISVGSLGKGINDEEVVG 142
I +SN EI +SVI+ GDDCVS+ GHGIS+GSLG+ + V
Sbjct: 239 IENSNSVEIYNSVISNGDDCVSIGPGAYDIDIRNITCGPGGHGISIGSLGEKNSHACVSN 298
Query: 143 LTVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKV 180
+TVR+ T+ G NI + V NPI+IDQ YC C K
Sbjct: 299 VTVRDSFIKFSENGVRIKTWQGGSGSVSGVTFDNIHVDTVRNPIIIDQYYCTTKSCANKT 358
Query: 181 PSQVKTSNVRFNNIRGT-----------SANKIPCQNIGIGNI 212
S V +++ + +I+GT +N +PC N+ + NI
Sbjct: 359 -SAVFVNDIVYQSIKGTYDIRSPPMHFGCSNNVPCTNLTLSNI 400
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREAC--NWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
V++V+ +GAV +G+ DD+ +F+TAW AC N + S + VP G F F+ STI
Sbjct: 64 VYDVRKYGAVGNGVADDTVSFKTAWDSACSNNKNNTASVLHVPYG------FTFMIRSTI 117
Query: 59 TGIKSVDSRYFHIN 72
+YF ++
Sbjct: 118 FTGPCRSYQYFQVD 131
>gi|356555461|ref|XP_003546050.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 401
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 113/254 (44%), Gaps = 46/254 (18%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W++ C + A PP ++ FN N + G S++ H+ + C ++++
Sbjct: 135 WQQPCVGNPQPGATCRPP---TAVTFNRCNRLQLKGYTSINPARSHVTLTSCNKGIISNI 191
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
++ A SPNT+GI I S G ++ +S IATGDDC+++ GHGIS+
Sbjct: 192 RLIAPGTSPNTDGIDISGSTGIQVLNSFIATGDDCIAISAGSSKIKITGITCGPGHGISI 251
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + + V + V NCT T T NI +PI+I
Sbjct: 252 GSLGTRGDTDIVEDVHVENCTLTETLTGVRIKTWQGGAGYARRITFENIRFVRANSPIII 311
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----ANKIPC-QNIGIGNINWVYNGVNV 221
DQ YCP+ +K S+V + I GTS A + C QN+G NI + +
Sbjct: 312 DQFYCPHRSDCQNQTRAIKISDVTYKGIVGTSLTDKAINLSCDQNVGCSNIVLDHVYITP 371
Query: 222 KVEGPETTSLCSNV 235
V G + S C N
Sbjct: 372 AVPGQKVFSYCHNA 385
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
FNV +GAV +G +DS AF AW+ AC + +++P + R L +T +G
Sbjct: 25 FNVLQYGAVGNGQTNDSPAFLKAWKAACQSKSHIARLIIP-----AKRTFLLKPTTFSG- 78
Query: 62 KSVDSRYFHINILG 75
S Y +I + G
Sbjct: 79 -PCKSNYTYIQLSG 91
>gi|24898904|dbj|BAC23082.1| allergen Cry j 2 [Cryptomeria japonica]
gi|114841595|dbj|BAF32099.1| pollen allergen [Cryptomeria japonica]
gi|114841601|dbj|BAF32102.1| pollen allergen [Cryptomeria japonica]
gi|114841625|dbj|BAF32114.1| pollen allergen [Cryptomeria japonica]
gi|114841631|dbj|BAF32117.1| pollen allergen [Cryptomeria japonica]
gi|114841637|dbj|BAF32120.1| pollen allergen [Cryptomeria japonica]
gi|114841639|dbj|BAF32121.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 107/237 (45%), Gaps = 49/237 (20%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W C W + + + +I+F+F I G+K ++S FH+ C +K+ +
Sbjct: 164 WAGQCKWVNGRE-ICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGI 222
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA DSPNT+GI I +S + + I TGDDCV++ GHGIS+
Sbjct: 223 SITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISI 282
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG+ + EV + V F T N+ N ENPI+I
Sbjct: 283 GSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILI 342
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNIN 213
+Q YC S V+ +V + NIRGTSA + +PC+NI + +I+
Sbjct: 343 NQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPCKNINLSDIS 399
Score = 43.9 bits (102), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV+ +GAV DG D ++AF TAW+ AC SA+L+ PG
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPG 97
>gi|218197319|gb|EEC79746.1| hypothetical protein OsI_21117 [Oryza sativa Indica Group]
Length = 534
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 98/196 (50%), Gaps = 39/196 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF ++ T+TGI V+S H+ C + ++DL I++ +SPNT+GIH
Sbjct: 264 MPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDLTISSPENSPNTDGIH 323
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 324 LQNSKQVSIHHTNLACGDDCVSIQTGCSDINIHNVNCGPGHGISIGGLGRYNTKACVSNV 383
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PI+IDQ YC C +
Sbjct: 384 TVRDVNMFKTMTGVRIKTWQGGSGLVQGIRFSNIQVSEVQTPIIIDQFYCDRTTCRNQT- 442
Query: 182 SQVKTSNVRFNNIRGT 197
S V S V++ NIRGT
Sbjct: 443 SAVAVSGVQYENIRGT 458
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
VFNV DFGA DG+ DD++AFE AW AC + S VLVP
Sbjct: 133 VFNVVDFGARGDGVTDDTQAFEEAWAAACKVEA--STVLVP 171
>gi|1495261|emb|CAA66407.1| polygalacturonase precursor homologue [Arabidopsis thaliana]
Length = 328
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 111/220 (50%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+PP K ++RF N+ T+ I V+S H+ +K+N++ I++ +SPNT+GIH
Sbjct: 104 IPPMKPTALRFYSSNNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNTDGIH 163
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG-----INDE 138
+ ++ EI HS IA GDDCVS+ GHGIS+G LGK ++D
Sbjct: 164 LQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGKDKSVACVSDI 223
Query: 139 EVVGLTVRNCT-----------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
V ++++N T +NI +V+ PIVIDQ YC +KC +
Sbjct: 224 IVEDISIQNTLAGVRIKTWQGGLGVVKNLTFSNIQVKDVKVPIVIDQYYCDKSKCKNQTR 283
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
+ V S V++NNI G+ +N +PC ++ + +I
Sbjct: 284 A-VSISGVKYNNIVGSFTVQPVRIACSNNVPCMDVDLMDI 322
>gi|242091477|ref|XP_002441571.1| hypothetical protein SORBIDRAFT_09g029500 [Sorghum bicolor]
gi|241946856|gb|EES20001.1| hypothetical protein SORBIDRAFT_09g029500 [Sorghum bicolor]
Length = 537
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 97/196 (49%), Gaps = 39/196 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF ++ T+TGI V+S H+ C + ++DL I++ SPNT+GIH
Sbjct: 267 MPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDLTISSPEHSPNTDGIH 326
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 327 LQNSKEVSIHHTNLACGDDCVSIQTGCSDVNIHNVNCGPGHGISIGGLGRYNTKACVSNI 386
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PI+IDQ YC C +
Sbjct: 387 TVRDVKMFRTMTGVRIKTWQGGSGLVQGIRFSNIQVSEVQTPIIIDQFYCDKTTCRNQT- 445
Query: 182 SQVKTSNVRFNNIRGT 197
S V S V++ NIRGT
Sbjct: 446 SAVAVSGVQYENIRGT 461
>gi|168004644|ref|XP_001755021.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693614|gb|EDQ79965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 419
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 105/245 (42%), Gaps = 58/245 (23%)
Query: 57 TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG 116
T+ + VD+ HIN + + + A SPNT+GIHI + + + +ATG
Sbjct: 150 TVRTVTFVDAPQVHINFQDITEGHVKGITVLAPWSSPNTDGIHISGTTDFVVRNCYVATG 209
Query: 117 DDCVSL-----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------ 153
DDCVS+ HGISVGSLG V + V+NC T
Sbjct: 210 DDCVSIVSGSRNIGVYDTYCGIGCHGISVGSLGYNGQHANVTQVQVKNCQLDSTTNGLRI 269
Query: 154 ----------------NIVTNNVENPIVIDQLYCPYNKCN---IKVPSQVKTSNVRFNNI 194
NI +NV NPI+IDQ YCP ++ + + V V+F NI
Sbjct: 270 KTWQGGTGIASNIDFRNIKMSNVSNPIIIDQFYCPPSQTEEPCSNLSTAVHIDLVKFTNI 329
Query: 195 RGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQI 244
GTSA+ PC NI + +IN +++G ++CSN G QI
Sbjct: 330 TGTSASATAVKLACSDAEPCTNIRMKDINL------TRMDGNTARAVCSNAVGVAMGVQI 383
Query: 245 PATCV 249
P TC+
Sbjct: 384 PPTCL 388
Score = 38.1 bits (87), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
FNV GAV DGI +D+ AF AW +AC D V VP G
Sbjct: 15 FNVLLDGAVGDGITNDTNAFLAAWNKAC--DARNGEVYVPSG 54
>gi|145332593|ref|NP_001078162.1| polygalacturonase [Arabidopsis thaliana]
gi|332642198|gb|AEE75719.1| polygalacturonase [Arabidopsis thaliana]
Length = 452
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 50/208 (24%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
F N+ ++G+ +DS HI+I C + ++ L+I A SPNT+GI +G+S+ I
Sbjct: 139 FRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNVVIQ 198
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
+IATGDDC+++ GHGIS+GSLGK V + V+NC F GT
Sbjct: 199 DCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNFRGT 258
Query: 154 ----------------------NIVTNNVENPIVIDQLYCPYNKCNIK--VPSQVKTSNV 189
I +NVENPI+IDQ Y + N K S V+ S V
Sbjct: 259 MNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEVSKV 318
Query: 190 RFNNIRGTS----------ANKIPCQNI 207
F+N GTS + ++PC I
Sbjct: 319 VFSNFIGTSKSEYGVDFRCSERVPCTEI 346
>gi|307135968|gb|ADN33827.1| polygalacturonase [Cucumis melo subsp. melo]
Length = 610
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 115/252 (45%), Gaps = 58/252 (23%)
Query: 12 DGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI--TGIKSVDSRYF 69
DG+ D S E W E+C + + P K F + S I G+ +S+
Sbjct: 303 DGVIDGSG--EKWWAESCKKNKSR------PCKGAPTAFTIDSSSNIRVKGLTIQNSQQM 354
Query: 70 HINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------- 122
H I +++ +++++A DSPNT+GIHI S + +S I+TGDDC+S+
Sbjct: 355 HFTIARSETVRITEVRVSAPGDSPNTDGIHITQSTNVVVQNSKISTGDDCISIVNASSGI 414
Query: 123 ---------GHGISVGSLGK----GINDEEVVGLT--------VRNCTFTG--------- 152
GHGIS+GSLGK GI + V+ VR T+ G
Sbjct: 415 KMKGISCGPGHGISIGSLGKDNSTGIVTKVVLDTAFLRETTNGVRIKTWQGGSGYVRSVR 474
Query: 153 -TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK---------- 201
N+ +VENPI+IDQ YC S VK S + + NI GT+ +K
Sbjct: 475 FENVRMEDVENPIIIDQFYCDSPTTCETQTSAVKISQIMYRNISGTTTSKNAMKFACSDS 534
Query: 202 IPCQNIGIGNIN 213
+PC NI + N+N
Sbjct: 535 VPCSNIILSNVN 546
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL 46
+ NV F AV DG+ DD+ AF AW AC+ KS +LVP K YL
Sbjct: 206 LMNVDSFDAVGDGVTDDTMAFRKAWETACSTS--KSVLLVPKEKRYL 250
>gi|10176984|dbj|BAB10216.1| polygalacturonase-like protein [Arabidopsis thaliana]
Length = 411
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 96/204 (47%), Gaps = 49/204 (24%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I+ I DS F +++ + + L ITA DSPNT+GIHI S + S I TGD
Sbjct: 159 ISNIMVKDSPNFQMSLEDSKWVIVKQLTITADGDSPNTDGIHIQRSQNVIVYDSNIRTGD 218
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG+ E V + VR+CTF T
Sbjct: 219 DCISIGDGSKYINISRISCGPGHGISIGSLGRYGTKETVENVVVRDCTFRETTNGVRIKT 278
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
I + PI+IDQ YCP+++C + V+ NV FN+I GTS
Sbjct: 279 WQGGRGHVRNVLFERIKLHGATRPIIIDQFYCPHSQCKNHTKA-VEIKNVMFNHIHGTSI 337
Query: 200 NK----------IPCQNIGIGNIN 213
K +PC++I + +IN
Sbjct: 338 KKPFVQLLCSKSVPCRDIFMNDIN 361
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV ++GA+ DG DDSKAF+ AW + CN+ G +S + +P G
Sbjct: 35 IFNVLNYGAIGDGFSDDSKAFKDAWEDTCNYIGSESIMEIPEG 77
>gi|147765591|emb|CAN62658.1| hypothetical protein VITISV_039094 [Vitis vinifera]
Length = 435
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 48/235 (20%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++ F+F N+ I G+ +S H+ + C L++L I A +SPNT+GI IG +
Sbjct: 188 IALGFSFCNNLQIYGLNXXNSPSKHVKLFRCNGAXLSNLNIKAPKESPNTDGIVIGECSQ 247
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
++ + I TGDDCV++ GHGIS+GSLG + V + V++ +
Sbjct: 248 IQVHDNNIGTGDDCVAILKGSSNINISRVACGPGHGISIGSLGMNGAYDTVEEIHVQDSS 307
Query: 150 FTGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
FTGT I N ENPI+IDQ YCP C K S VK S
Sbjct: 308 FTGTQNGIRIKTWQGGSGYARKISFQGITLNAAENPIIIDQYYCPQLHCPNKT-SAVKVS 366
Query: 188 NVRFNNIRGTSANK----IPC-QNIGIGNINWVYNGVNVKVEGPE--TTSLCSNV 235
++ + ++GTS K + C Q++ NI N +N+ G + T+S C N
Sbjct: 367 DISYTGVQGTSMTKTAINLRCSQSMACTNIE--LNRINITSVGQKFITSSFCLNA 419
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREAC 29
FNV DFGA+ DG+ DDS+AF AW C
Sbjct: 55 FNVLDFGAIGDGVTDDSQAFLKAWNAVC 82
>gi|22426|emb|CAA44248.1| polygalacturonase [Zea mays]
gi|287830|emb|CAA47234.1| polygalacturonase [Zea mays]
Length = 306
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 80/123 (65%), Gaps = 16/123 (13%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT 153
T
Sbjct: 283 KKT 285
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 90
>gi|302769504|ref|XP_002968171.1| hypothetical protein SELMODRAFT_89085 [Selaginella moellendorffii]
gi|300163815|gb|EFJ30425.1| hypothetical protein SELMODRAFT_89085 [Selaginella moellendorffii]
Length = 383
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 113/241 (46%), Gaps = 55/241 (22%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG- 116
++GI+ +S+ ++ + C+++ + ++I +SPNT+GIHI SS + H+ I TG
Sbjct: 148 MSGIRIQNSQQMNVAFVSCHDVIVAKIRIENPQNSPNTDGIHIESSTNVTVEHAAIGTGS 207
Query: 117 DDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------- 153
DDCVS+ GHGIS+GSLGKG + V + V TGT
Sbjct: 208 DDCVSIGSGSSNVVIRDCECGPGHGISIGSLGKGESAAYVSSVLVHRVQITGTMNGLRIK 267
Query: 154 ---------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS 198
N+ + V NPI+IDQ YC + S V+ +V + +IRGTS
Sbjct: 268 TWQGGRGSASNIRFENVSMSGVANPIIIDQNYCDALRPCSPQGSAVQVKSVEYLHIRGTS 327
Query: 199 ANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
A I PC ++ + +IN + G + ++ CSN G +PA+C
Sbjct: 328 ATAIATSFDCSASLPCLDLLLHDINL------TQSSGAQASASCSNAFGVSSGSVVPASC 381
Query: 249 V 249
+
Sbjct: 382 L 382
>gi|22329192|ref|NP_195292.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332661147|gb|AEE86547.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 394
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 127/315 (40%), Gaps = 117/315 (37%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK----------------- 44
+NV +F A DG DDS+AF AW AC DG +L+P GK
Sbjct: 24 YNVLNFDAKGDGQTDDSEAFLQAWTAACGGDGDIKTLLIPSGKTFLLQPTVFQGPCKSSS 83
Query: 45 -----------------------YLSIRFNFLNDSTITGIKSVDSR---YFHINILG--- 75
+ I+F+ ++ I G ++DSR ++ +N+
Sbjct: 84 IKVQLDGTIVAPSDKFAWSDPISRMWIKFSTVSGLIIVGSGTIDSRGSSFWELNLKASQR 143
Query: 76 --------CYNLKLN-----------------------DLKITAHADSPNTEGIHIGSSN 104
C NL++N ++ + A SPNT+GI I S
Sbjct: 144 PTALHISKCDNLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDISDST 203
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
I S I TGDDC+++ GHGISVGSLG G + +V + V +C
Sbjct: 204 NINIFDSTIQTGDDCIAINSGSSNINITGINCGPGHGISVGSLGAGGAEAKVSDVQVTHC 263
Query: 149 TF----------------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
TF + T+I N +NPI+IDQ Y +K + S V
Sbjct: 264 TFNQTTNGARIKTWLGGQGYARNISFTDITLVNTKNPIIIDQHY--IDKGRLTEESAVAI 321
Query: 187 SNVRFNNIRGTSANK 201
SNV+F + RGTS+NK
Sbjct: 322 SNVKFVDFRGTSSNK 336
>gi|118197961|gb|ABK78769.1| putative allergen Cup a 2 variant 2 [Hesperocyparis arizonica]
Length = 381
Score = 96.7 bits (239), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 98/218 (44%), Gaps = 48/218 (22%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G+ +I+ +F T+ + ++S FH+ C +K+ +KI A +SPNT+GI I
Sbjct: 129 GRPTAIKIDFSKSVTVKELTLMNSPEFHLVFGECDGVKIQGIKIKAPKESPNTDGIDIFG 188
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S EI I TGDDCV++ GHG+S+GSLGKG + EV + +
Sbjct: 189 SKRFEIEKCTIGTGDDCVAIGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEVSFVHLD 248
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
F T N+ N ENPI+I+Q YC S V
Sbjct: 249 GAKFIDTQNGLRIKTWQGGSGLASHITYENVEMVNAENPILINQFYCTSAAACENQRSAV 308
Query: 185 KTSNVRFNNIRGTSA----------NKIPCQNIGIGNI 212
K +V F NI GTSA + +PC NI + N+
Sbjct: 309 KIEDVTFKNIHGTSATAAAIQLMCSDSVPCSNIKLSNV 346
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
VFNV+ +GAV DG D + AFE W EAC + + LVP K +
Sbjct: 6 VFNVEHYGAVGDGNHDSTDAFEKTWNEACK--TLSAVFLVPANKKFVV 51
>gi|356503452|ref|XP_003520522.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
max]
Length = 425
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 116/259 (44%), Gaps = 62/259 (23%)
Query: 42 PGKYLSIRFNFLN--DSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
P K +F N D +K ++ H+ N+K++DLK+TA DSPNT+GIH
Sbjct: 143 PCKDAPTALSFYNCKDLIFENLKIENAXQIHVAFQDSVNVKVSDLKVTAPEDSPNTDGIH 202
Query: 100 IGSSNGSEISHSV------IATGDDCVSL----------------GHGISVGSLGKGIND 137
+ ++ +I V IA+GDDC+ + GHGIS+GSL G +
Sbjct: 203 VTNTQNIQIXEPVYLYFCIIASGDDCICMVQGSRNVEATDNTCGPGHGISIGSLXAGKSK 262
Query: 138 EEVVGLTV-----------RNCTFTG----------TNIVTNNVENPIVIDQLYCPYNKC 176
E V G+ V R T+ G NI +NV NPI+I+Q YC + K
Sbjct: 263 EIVSGVLVDIAKIFGRSXIRIKTWQGGSGSASNIQFQNIEMDNVTNPIIINQNYCDHKKR 322
Query: 177 NIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGP 226
K NV + NI GTS + + PCQ I + NI N++ EG
Sbjct: 323 PCKTQKSAIQINVLYQNITGTSTSDVAVKLACSENFPCQEIVLQNI-------NLECEGD 375
Query: 227 ETTSLCSNVKPTLFGKQIP 245
++C+NV+ + G P
Sbjct: 376 AAYAICNNVELSYLGHVNP 394
Score = 41.2 bits (95), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRF 50
NV D+GA +G DD+KAF AW+ C+ ++ ++VP G YL IRF
Sbjct: 28 NVNDYGAKGNGSTDDTKAFNKAWQVVCSTG--EAILVVPQGNYLLKPIRF 75
>gi|225442916|ref|XP_002265133.1| PREDICTED: probable polygalacturonase At3g15720-like [Vitis
vinifera]
Length = 374
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 110/236 (46%), Gaps = 49/236 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+++F + G+ ++S+ HI I C+ ++ +K+ A DSPNT+GI+I SS
Sbjct: 127 ALKFYECPGMVLKGLTHLNSQKQHIVITKCHGALISKIKVIAPEDSPNTDGINIASSKNV 186
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGK-GINDEEVVGLTVRNCT 149
+ S I+TGDDC+++ HGIS+G+LG G DE V + V +CT
Sbjct: 187 RVQRSHISTGDDCIAISAGSSNIKIKGMTCAPSHGISIGALGDPGKPDESVEKVDVSDCT 246
Query: 150 FTG----------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
F G NI V PIVIDQ YCP C V+ S
Sbjct: 247 FKGPGIGVRIKTWQGGRGRVRNISYKNIEVQEVGTPIVIDQFYCPRGGCK-NNSDAVRVS 305
Query: 188 NVRFNNIRGT----SANKIPC-QNIGIGNINWVYNGVNVKVEGPETTS--LCSNVK 236
+V ++ IRGT A + C QN NI V + +N++ P+ + C NVK
Sbjct: 306 DVSYSGIRGTYTRDDAMSLLCSQNAACTNI--VLDNINLRTMDPKKAAKVKCFNVK 359
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV +GAV +G DDSKAF AW C+ + +++PP +L
Sbjct: 10 FNVVSYGAVGNGKTDDSKAFMKAWSAVCHGQSHDAHLIIPPKTFL 54
>gi|413953936|gb|AFW86585.1| hypothetical protein ZEAMMB73_740672 [Zea mays]
Length = 419
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 103/228 (45%), Gaps = 49/228 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++R ++ T+TGI S FH+ + C ++++ + I + DSPNT+GIH+ SS G
Sbjct: 167 ALRVYQGDNVTVTGITIRSSPKFHLTLDTCRAVEVHGVTIASPGDSPNTDGIHLASSVGV 226
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I H+ IA GDDCVS+ GHGISVG LGKG V +TV++ TF
Sbjct: 227 SIHHTTIACGDDCVSIQAGCSDVSIRNVYCGPGHGISVGGLGKGGATATVSDVTVQDVTF 286
Query: 151 ----TGTNIVT------------------NNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
TG I T + V+ PIVIDQ YC + C + S V
Sbjct: 287 NHTMTGVRIKTWQGGSGSVKNVRFSGVRVSAVKTPIVIDQYYCDHTACTNQT-SAVAVVG 345
Query: 189 VRFNNIRGTSANK---------IPCQNIGIGNINWV-YNGVNVKVEGP 226
+ + GT + PC I + +I +V+GP
Sbjct: 346 AAYQGVAGTYTQRPVYLACSDAAPCSGIHLADIQLQPVKDSGYRVQGP 393
>gi|42566242|ref|NP_192098.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332656691|gb|AEE82091.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 468
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 107/216 (49%), Gaps = 51/216 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++RF ++ + G+ +S H+ + GC+ + +N L+I + SPNT+GIHI +SN
Sbjct: 202 ALRFFMSSNVIVKGLSIKNSPQVHLKLDGCHVVHINSLRIISPPASPNTDGIHIENSNSV 261
Query: 107 EISHSVIATGDDCVSL-----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
EI +SVI+ GDDCVS+ GHGIS+GSLG+ + V +TVR+
Sbjct: 262 EIYNSVISNGDDCVSIGPGAYDIDIRNITCGPGGHGISIGSLGEKNSHACVSNVTVRDSF 321
Query: 149 -----------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T+ G NI + V NPI+IDQ YC C K S V +
Sbjct: 322 IKFSENGVRIKTWQGGSGSVSGVTFDNIHVDTVRNPIIIDQYYCTTKSCANKT-SAVFVN 380
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
++ + +I+GT +N +PC N+ + NI
Sbjct: 381 DIVYQSIKGTYDIRSPPMHFGCSNNVPCTNLTLSNI 416
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREAC--NWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
V++V+ +GAV +G+ DD+ +F+TAW AC N + S + VP G F F+ STI
Sbjct: 64 VYDVRKYGAVGNGVADDTVSFKTAWDSACSNNKNNTASVLHVPYG------FTFMIRSTI 117
Query: 59 TGIKSVDSRYFHIN 72
+YF ++
Sbjct: 118 FTGPCRSYQYFQVD 131
>gi|297814886|ref|XP_002875326.1| hypothetical protein ARALYDRAFT_484425 [Arabidopsis lyrata subsp.
lyrata]
gi|297321164|gb|EFH51585.1| hypothetical protein ARALYDRAFT_484425 [Arabidopsis lyrata subsp.
lyrata]
Length = 470
Score = 96.3 bits (238), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 126/259 (48%), Gaps = 55/259 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+PP K ++RF ++ T+ I V+S H+ +K+N++ I++ +SPNT+GIH
Sbjct: 188 IPPMKPTALRFYAAHNVTVRDISIVNSPLCHLKFDDSDGVKVNNITISSPENSPNTDGIH 247
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG-----INDE 138
+ ++ EI HS IA GDDCVS+ GHGIS+G LGK ++D
Sbjct: 248 LQNTRNVEIQHSNIACGDDCVSIQTGSSNVHIHHINCGPGHGISIGGLGKDKSVACVSDI 307
Query: 139 EVVGLTVRNCT-----------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
V ++++N T +NI +V+ PIVIDQ YC +KC +
Sbjct: 308 IVEDISIQNTLAGVRIKTWQGGLGVVKNLTFSNIQVTDVKVPIVIDQYYCDKSKCKNQTR 367
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNINWVYNGVNVKVEGPET---- 228
+ V S +++NNI G+ +N +PC ++ + +I +G + G +T
Sbjct: 368 A-VSISGIKYNNIVGSFTVQPVRIACSNNVPCMDVDLMDIRLRPSG---GIRGLQTHQQQ 423
Query: 229 TSLCSNVKPTLFGKQIPAT 247
+LC N G +P++
Sbjct: 424 QALCWNSYGKTQGPLVPSS 442
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
VFN+ FGA DG+ DDSKA AW+ AC G K V +P GK ++
Sbjct: 66 VFNIISFGAKGDGVSDDSKALVRAWKAACEVVGGK--VEIPAGKQFLVK 112
>gi|356547430|ref|XP_003542115.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 422
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 111/254 (43%), Gaps = 46/254 (18%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W++ C + + A PP ++ FN N + G S++ H+ + C ++++
Sbjct: 156 WQQPCVGNPLPGATCRPP---TAVTFNRCNRLQLKGYTSINPARSHMTLTSCKKGIISNI 212
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
++ A SPNT+GI I S ++ +S IATGDDC+++ GHGIS+
Sbjct: 213 RLIAPGTSPNTDGIDISGSTDIQVLNSFIATGDDCIAISAGSSKIKITGITCGPGHGISI 272
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + V + V NCT T T I NPI+I
Sbjct: 273 GSLGTRGETDIVEDVHVENCTLTETLTGVRIKTWQGGAGYARRITFEKIRFVRANNPIII 332
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----ANKIPC-QNIGIGNINWVYNGVNV 221
DQ YCP+ +K S+V + I GTS A + C QN+G NI + +
Sbjct: 333 DQFYCPHRSDCQNQTRAIKISDVTYKGIVGTSLTDKAINLSCDQNVGCSNIVLDHVYITP 392
Query: 222 KVEGPETTSLCSNV 235
V G + S C N
Sbjct: 393 SVPGQKVFSYCHNA 406
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
FNV +GAV +G +DS AF AW+ AC + S +++P + R L +T +G
Sbjct: 46 FNVLQYGAVGNGQTNDSPAFLKAWKAACQSNSHISRLIIP-----AKRTFLLKPTTFSG- 99
Query: 62 KSVDSRYFHINILG 75
S Y +I + G
Sbjct: 100 -PCKSNYTYIQLSG 112
>gi|8778527|gb|AAF79535.1|AC023673_23 F21D18.18 [Arabidopsis thaliana]
Length = 492
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 99/197 (50%), Gaps = 39/197 (19%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
YL IRF N+ + G++ +S FH+ GC + +N+++I++ SPNT+GIH+G++
Sbjct: 227 YLMIRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTR 286
Query: 105 GSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC 148
I +SV++ GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 287 SVGIYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNT 346
Query: 149 TF---------------TGT-------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
TG+ NI NV N I++DQ YC C + S VK
Sbjct: 347 VIRDSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNET-SAVKV 405
Query: 187 SNVRFNNIRGTSANKIP 203
+V + NI+GT + P
Sbjct: 406 FDVEYRNIKGTYDVRSP 422
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V FGAV DG DD+ AF+ AW+ AC ++S V++ P
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAAC---AVESGVVLAP 117
>gi|317106742|dbj|BAJ53238.1| JHL06P13.19 [Jatropha curcas]
Length = 443
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 131/343 (38%), Gaps = 129/343 (37%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI-----------R 49
VF V DFGA DG +D+KAF AWR AC+ ++ +++P G + R
Sbjct: 55 VFFVGDFGAKGDGFSNDTKAFIDAWRMACSCPA-RTRIIIPAGFIFLVHPVDLAGPCKSR 113
Query: 50 FNFLNDSTIT---------GIKSVDSRYFH------------INILG------------- 75
+ TIT G+ YFH IN +G
Sbjct: 114 ITLIISGTITAPKDPAHWKGLNPRKWLYFHGVNHLTIDGGGTINGMGRGWWARSCKINPP 173
Query: 76 ------------CYNLKLNDLKIT-----------------------AHADSPNTEGIHI 100
C NLK+ +L + + + SPNT+GIHI
Sbjct: 174 CRHAPTAITFHKCKNLKVRNLSVVHGQQMHISFTNCIRVMAFHLVVISPSFSPNTDGIHI 233
Query: 101 GSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT 144
+S G E+ S++ TGDDC+S+ GHGIS+GSLGK + V +
Sbjct: 234 SASRGVEVRDSIVRTGDDCISIVSNSSRIKIKNFACGPGHGISIGSLGKYNSSSRVYDIM 293
Query: 145 VRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
V + T N+ NV NPI+IDQ YC S
Sbjct: 294 VDGAFLSNTDNGVRIKTWQGGSGNATEIRFQNVFMENVSNPIIIDQYYCDSPISCANQTS 353
Query: 183 QVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWV 215
VK +N+ F +I+GTSA + PC+ + + +I V
Sbjct: 354 AVKVANISFVHIKGTSATENAIKFACSDYSPCEGLYLEDIQLV 396
>gi|297848456|ref|XP_002892109.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337951|gb|EFH68368.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 491
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 108/229 (47%), Gaps = 52/229 (22%)
Query: 35 KSAVLVPP-GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSP 93
KSA++ P +++RF ++ + G++ +S FH GC + + L ITA SP
Sbjct: 212 KSAIVAGPCDSPIALRFFMSSNLRVEGLQIKNSPQFHFRFDGCQGVHVESLHITAPPLSP 271
Query: 94 NTEGIHIGSSNGSEISHSVIATGDDCVSL-----------------GHGISVGSLGKGIN 136
NT+GIHI +SN I +S+I+ GDDCVS+ GHGIS+GSLG +
Sbjct: 272 NTDGIHIENSNSVTIYNSIISNGDDCVSIGSGSYDVDIRNLTCGPGGHGISIGSLGNHNS 331
Query: 137 DEEVVGLTVRNCTF----------------------TGTNIVTNNVENPIVIDQLYCPYN 174
V +TVR+ T NI ++V NPI+IDQ YC
Sbjct: 332 RACVSNITVRDSVIKYSDNGVRIKTWQGGSGSVSGVTFNNIHVDSVRNPIIIDQYYCMTK 391
Query: 175 KCNIKVPSQVKTSNVRFNNIRGT-----------SANKIPCQNIGIGNI 212
C K S V S++ + I+GT ++ IPC N+ + +I
Sbjct: 392 DCANKT-SAVFVSDIAYQGIKGTYDIRSPPMHFGCSDAIPCTNLTLSDI 439
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREAC-NWDGIKSAVLVPPGKYLSIRFNFLNDSTIT 59
++NV+ +GAV DG DD++AF+ AW AC N + S +LVP G + F+ STI
Sbjct: 88 IYNVRKYGAVGDGETDDTEAFKMAWDSACNNENNTDSVLLVPYG------YTFMIQSTIF 141
Query: 60 GIKSVDSRYFHIN 72
++F ++
Sbjct: 142 TGPCRSYQFFQVD 154
>gi|114841605|dbj|BAF32104.1| pollen allergen [Cryptomeria japonica]
gi|114841641|dbj|BAF32122.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV+ +GAV DG D ++AF TAW+ AC SA+L+ PG
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPG 97
>gi|225450488|ref|XP_002276945.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
gi|296089826|emb|CBI39645.3| unnamed protein product [Vitis vinifera]
Length = 464
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 114/242 (47%), Gaps = 52/242 (21%)
Query: 22 ETAWREACN-WDGIKSAVLVPP-GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 79
E W C GI L P ++IRF ++ T+ G+K +S FH C N+
Sbjct: 175 EKWWDLPCKPHKGINGTTLPGPCDSPVAIRFFTSSNLTVQGLKIKNSPQFHFRFDNCQNV 234
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG---------------- 123
++ L I A A+SPNT+GIHI ++NG +I +S+++ GDDCVS+G
Sbjct: 235 HIDLLNIKAPAESPNTDGIHIENTNGVKIYNSIVSNGDDCVSIGAGCHNVDIRNITCGPS 294
Query: 124 HGISVGSLGKGINDEEVVGLT------------VRNCTFTG----------TNIVTNNVE 161
HGIS+GSLG + V +T VR T+ G NI + V
Sbjct: 295 HGISIGSLGIRNSRACVSNITVTDSIIKHSANGVRIKTWQGGSGSVSKVTFNNIHMDTVR 354
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT-----------SANKIPCQNIGIG 210
NPI+IDQ YC C + S V S++ + NI+GT ++ +PC N+ +
Sbjct: 355 NPIIIDQYYCLTKGC-VNQTSAVLISHISYTNIKGTYDVRSSPMHFACSDSVPCTNLTLS 413
Query: 211 NI 212
+
Sbjct: 414 EV 415
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
VFNV+ FGAV DG+ DD++AF+ W AC + + +LVP G I+ TG
Sbjct: 69 VFNVRSFGAVGDGVTDDTQAFKMTWDTACQAE--SATLLVPHGHSFMIQSTIFTGPCKTG 126
Query: 61 I 61
+
Sbjct: 127 L 127
>gi|222632674|gb|EEE64806.1| hypothetical protein OsJ_19662 [Oryza sativa Japonica Group]
Length = 534
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 97/196 (49%), Gaps = 39/196 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF ++ T+TGI V+S H+ C + ++DL I++ +SPNT+GIH
Sbjct: 264 MPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDLTISSPENSPNTDGIH 323
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I HS +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 324 LQNSKQVSIHHSNLACGDDCVSIQTGCSDINIHNVNCGPGHGISIGGLGRYNTKACVSNV 383
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PI+IDQ YC C +
Sbjct: 384 TVRDVNMFKTMTGVRIKTWQGGSGLVQGIRFSNIQVSEVQTPIIIDQFYCDRTTCRNQT- 442
Query: 182 SQVKTSNVRFNNIRGT 197
S V V++ NIRGT
Sbjct: 443 SAVAVLGVQYENIRGT 458
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
VFNV DFGA DG+ DD++AFE AW AC + S VLVP
Sbjct: 133 VFNVVDFGARGDGVTDDTQAFEEAWAAACKVEA--STVLVP 171
>gi|147795881|emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
Length = 1052
Score = 96.3 bits (238), Expect = 1e-17, Method: Composition-based stats.
Identities = 84/290 (28%), Positives = 121/290 (41%), Gaps = 80/290 (27%)
Query: 3 NVKDFGAVADGIKDDSKAFET--AWREACNWDGIKSAVLVPPGKYLSIRF---------- 50
NV FGA DG+ DD++ T A E NWD + K + F
Sbjct: 704 NVDAFGAAGDGVADDTQIDGTIVAPDEPKNWDPKNPRNWLDFSKLKGVLFQGGGIIDGSG 763
Query: 51 ----------NFLNDSTITGIKSV--------DSRYFHINILGCYNLKLNDLKITAHADS 92
N N TI SV +S+ H I ++++ D++++A DS
Sbjct: 764 SKWWASSCKRNKSNALTIDSSSSVWVKGLTIQNSQQMHFTISRSQSVRIIDVQVSAPEDS 823
Query: 93 PNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGIN 136
PNT+GIHI S + + I TGDDC+S+ GHGIS+GSLGK +
Sbjct: 824 PNTDGIHITDSTNVLLQNCKIGTGDDCISIVSGSSNIKMKTIYCGPGHGISIGSLGKDNS 883
Query: 137 DEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPY- 173
V + + + GT N+ +V NPI+IDQ YC
Sbjct: 884 SGIVTKVVLDSAFLRGTTNGLRIKTWQGGSGFVRAVRYQNVRMEDVANPILIDQFYCDSP 943
Query: 174 NKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNIN 213
N+C + S V+ S + + NI GT+ ++ PC NI + NIN
Sbjct: 944 NECKNQT-SAVQISQIMYRNISGTTKSAKAMKFACSDSFPCNNIVVSNIN 992
>gi|1171004|sp|P43212.1|PGLR2_CRYJA RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Allergen
Cry j II; AltName: Full=Major pollen allergen Cry j 2;
AltName: Full=Pectinase; AltName: Allergen=Cry j 2;
Flags: Precursor
gi|577696|dbj|BAA07021.1| Cry j II precursor [Cryptomeria japonica]
Length = 514
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV+ +GAV DG D ++AF TAW+ AC SA+L+ PG
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPG 97
>gi|210063111|gb|ACJ06506.1| polygalacturonase [Diospyros kaki]
Length = 441
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 65/275 (23%)
Query: 23 TAWREACNWDGIKSAVLVPPGKYLSIRFNFLN--DSTITGIKSVDSRYFHINILGCYNLK 80
T W +C I A+ P K F N + + +K ++ H++ N++
Sbjct: 177 TWWENSCK---INKAL---PCKDAPTALTFYNCKNIIVKNLKIQHAQQIHLSFEKSTNVQ 230
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
+ L +T+ SPNT+GIHI ++ +IS VI TGDDC+S+ GH
Sbjct: 231 ASSLTVTSPQTSPNTDGIHITNTQNIQISSCVIGTGDDCISIVSGSQKVKATDITCGPGH 290
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVEN 162
GIS+GSLG G + V + V GT N+ NNV+N
Sbjct: 291 GISIGSLGSGNSKAFVSDVLVNGAKLYGTQNGVRIKTWQGGSGIASNIKFLNVQMNNVDN 350
Query: 163 PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNI 212
PI+IDQ YC +K + S V+ +V + NI+GTSA+ + PC+ I
Sbjct: 351 PIIIDQNYCDQDKPCKEQGSSVQLKDVLYQNIQGTSASDVAINFSCSKDFPCEGI----- 405
Query: 213 NWVYNGVNVKVEG--PETTSLCSNVKPTLFGKQIP 245
V VN++ EG + C+NVK + G P
Sbjct: 406 --VLQSVNIRREGAVAAAKASCNNVKLSETGAVAP 438
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRF 50
++ DFGA DG DD++AF+ AW+ AC+ + + +LVP KYL IRF
Sbjct: 75 SIDDFGAKGDG-SDDTQAFKNAWQAACS-SSVAATLLVPKKKYLVKPIRF 122
>gi|114841635|dbj|BAF32119.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 107/237 (45%), Gaps = 49/237 (20%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W C W + + + +I+F+F I G+K ++S FH+ C +K+ +
Sbjct: 164 WAGQCKWVNGRE-ICNDRDRPTAIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGI 222
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA DSPNT+GI I +S + + I TGDDCV++ GHGIS+
Sbjct: 223 SITAPRDSPNTDGIDIFASKNFHLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISI 282
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG+ + EV + V F T N+ N ENPI+I
Sbjct: 283 GSLGRENSRAEVSYVHVNGAKFIDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILI 342
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNIN 213
+Q YC S V+ +V + NIRGTSA + +PC++I + +I+
Sbjct: 343 NQFYCTSASACQNQRSAVQIQDVTYKNIRGTSATAAAIQLKCSDSMPCKDINLSDIS 399
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV+ +GAV DG D ++AF TAW+ AC SA+L+ PG
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPG 97
>gi|114841629|dbj|BAF32116.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
+FNV+ +GAV DG D ++AF TAW+ AC + +LVP K + F N
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFN 109
>gi|114841617|dbj|BAF32110.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
+FNV+ +GAV DG D ++AF TAW+ AC + +LVP K + F N
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFN 109
>gi|449531265|ref|XP_004172608.1| PREDICTED: probable polygalacturonase At3g15720-like, partial
[Cucumis sativus]
Length = 374
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 133/340 (39%), Gaps = 108/340 (31%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL--SIRFN------- 51
FNV D+GA+ +G DDSKAF AW + C + VP GK YL ++F
Sbjct: 27 FNVLDYGAIGNGKTDDSKAFLKAWNDVCGATEESPTLHVPDGKTYLLNPLKFQGPCKSKQ 86
Query: 52 ------------FLNDSTITGIKSVD---------------------SRYFH-------- 70
+++D I+ D + +FH
Sbjct: 87 LGGTLMAPTKDEWISDGKGQWIQFFDIEGLNLQGGGRFDGQGSLWWKALFFHNCNGLQMK 146
Query: 71 -----------INILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDC 119
I+I C+++ + L I+A DSPNT+GI I S I S +ATGDDC
Sbjct: 147 GMKHINSAKNHISINMCHDVIFSHLHISAPEDSPNTDGIDISESTNIFIEDSFMATGDDC 206
Query: 120 VSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN--------- 154
+++ GHGIS+GSLGK V + V NC T
Sbjct: 207 IAINNGSSNININGITCGPGHGISIGSLGKDGEYNVVENVHVSNCLLRSTQNGIRIKTWE 266
Query: 155 -------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK 201
I N +NPI+IDQ Y Y +K S+V + + GTSAN+
Sbjct: 267 GGYGYAKNITFEKITMKNAKNPIIIDQYYSSYAYSRKMKGMDIKVSDVTYREVNGTSANE 326
Query: 202 ----IPCQNIGIGNINWVYNGVNVKVEGP--ETTSLCSNV 235
C NI + + VN+K+ P + ++C N
Sbjct: 327 DAITFNCSQARCSNI--ILDNVNIKMTNPGEKAKAVCQNA 364
>gi|114841589|dbj|BAF32096.1| pollen allergen [Cryptomeria japonica]
gi|114841597|dbj|BAF32100.1| pollen allergen [Cryptomeria japonica]
gi|114841663|dbj|BAF32133.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV+ +GAV DG D ++AF TAW+ AC SA+L+ PG
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPG 97
>gi|225217044|gb|ACN85328.1| exopolygalacturonase precursor [Oryza brachyantha]
Length = 402
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 111/253 (43%), Gaps = 76/253 (30%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ N +N++ ++GI D+++FH+N+ C + +T SP+
Sbjct: 176 TLVLNTVNNALVSGITLKDAKFFHMNMFRCKD-------VTVQGGSPS------------ 216
Query: 107 EISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCTF 150
S + TGDDC+S+G HGISVGSLG+ ++++V +TVR+C
Sbjct: 217 --SAPPVGTGDDCISVGPGSDGINITGVTCGPGHGISVGSLGRYKDEKDVRDVTVRDCVL 274
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI V NPI+IDQ YCP C S+V
Sbjct: 275 RNTTNGVRIKSYEDALSPITASRLTYENIRMEGVANPIIIDQKYCPNKICTSSGSSEVTV 334
Query: 187 SNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS ++K+PC + + ++N Y G + K T ++CSN +
Sbjct: 335 KDVTFKNITGTSSTPEAVTLVCSDKLPCSGVQMQDVNVQYAGTDNK-----TMAVCSNAQ 389
Query: 237 PTLFGKQIPATCV 249
T G CV
Sbjct: 390 VTATGCLKELACV 402
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
+++ GA +G D SKA AW+ AC G K +++P G +++ +F
Sbjct: 53 YDIIKLGANGNGRTDSSKAVMEAWKSACGGAG-KQTIVIPKGDFVTGPMDFTGPCKGAVT 111
Query: 62 KSVDSRYFHINILGCYNLKL 81
+D N L Y KL
Sbjct: 112 VQLDGNLLGSNDLSKYKGKL 131
>gi|210063109|gb|ACJ06505.1| polygalacturonase [Diospyros kaki]
Length = 441
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 65/275 (23%)
Query: 23 TAWREACNWDGIKSAVLVPPGKYLSIRFNFLN--DSTITGIKSVDSRYFHINILGCYNLK 80
T W +C I A+ P K F N + + +K ++ H++ N++
Sbjct: 177 TWWENSCK---INKAL---PCKDAPTALTFYNCKNIIVKNLKIQHAQQIHLSFEKSTNVQ 230
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
+ L +T+ SPNT+GIHI ++ +IS VI TGDDC+S+ GH
Sbjct: 231 ASSLTVTSPQTSPNTDGIHITNTQNIQISSCVIGTGDDCISIVSGSQKVKATDITCGPGH 290
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVEN 162
GIS+GSLG G + V + V GT N+ NNV+N
Sbjct: 291 GISIGSLGSGNSKAFVSDVLVNGAKLYGTQNGVRIKTWQGGSGIASNIKFLNVQMNNVDN 350
Query: 163 PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNI 212
PI+IDQ YC +K + S V+ +V + NI+GTSA+ + PC+ I
Sbjct: 351 PIIIDQNYCDQDKPCKEQGSSVQLKDVLYQNIQGTSASDVAINFSCSKDFPCEGI----- 405
Query: 213 NWVYNGVNVKVEG--PETTSLCSNVKPTLFGKQIP 245
V VN++ EG + C+NVK + G P
Sbjct: 406 --VLQSVNIRREGAVAAAKASCNNVKLSETGAVAP 438
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRF 50
++ DFGA DG DD++AF+ AW +A + + +LVP KYL IRF
Sbjct: 75 SIDDFGAKGDG-SDDTQAFKNAW-QAARSSSVAATLLVPKKKYLVKPIRF 122
>gi|357455167|ref|XP_003597864.1| hypothetical protein MTR_2g103410 [Medicago truncatula]
gi|87162606|gb|ABD28401.1| Glycoside hydrolase, family 28 [Medicago truncatula]
gi|355486912|gb|AES68115.1| hypothetical protein MTR_2g103410 [Medicago truncatula]
Length = 451
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 107/239 (44%), Gaps = 52/239 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
+ W +C + + P ++ F+ + + ++S+ HI C +
Sbjct: 164 QEWWSRSCKINTTNPCLPAP----TALTFHKCKSLKVRNLTVLNSQKMHIAFTSCMRVVA 219
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
+ LK+ A A SPNT+GIHI ++ G EI S+I TGDDC+S+ GHG
Sbjct: 220 SRLKVLAPASSPNTDGIHISATKGVEIRDSLIRTGDDCISIVRNSSRVWIRNISCGPGHG 279
Query: 126 ISVGSLGKGINDEEVVGLT------------VRNCTFTG----------TNIVTNNVENP 163
IS+GSLGK E++ + VR T+ G NI+ NV NP
Sbjct: 280 ISIGSLGKSNVWEKIQNVIVDGAYLYNTDNGVRIKTWQGGSGFASKITFQNILMENVSNP 339
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNI 212
I+IDQ YC S V+ N+ F NI+GTSA + PC+ + + NI
Sbjct: 340 IIIDQYYCDSRHPCKNQTSAVQVGNISFINIQGTSATEETIKFACSDASPCEGLYLENI 398
>gi|506858|dbj|BAA06172.1| allergen [Cryptomeria japonica]
gi|114841577|dbj|BAF32090.1| pollen allergen [Cryptomeria japonica]
gi|114841581|dbj|BAF32092.1| pollen allergen [Cryptomeria japonica]
gi|114841583|dbj|BAF32093.1| pollen allergen [Cryptomeria japonica]
gi|114841585|dbj|BAF32094.1| pollen allergen [Cryptomeria japonica]
gi|114841587|dbj|BAF32095.1| pollen allergen [Cryptomeria japonica]
gi|114841593|dbj|BAF32098.1| pollen allergen [Cryptomeria japonica]
gi|114841599|dbj|BAF32101.1| pollen allergen [Cryptomeria japonica]
gi|114841609|dbj|BAF32106.1| pollen allergen [Cryptomeria japonica]
gi|114841611|dbj|BAF32107.1| pollen allergen [Cryptomeria japonica]
gi|114841615|dbj|BAF32109.1| pollen allergen [Cryptomeria japonica]
gi|114841621|dbj|BAF32112.1| pollen allergen [Cryptomeria japonica]
gi|114841623|dbj|BAF32113.1| pollen allergen [Cryptomeria japonica]
gi|114841627|dbj|BAF32115.1| pollen allergen [Cryptomeria japonica]
gi|114841633|dbj|BAF32118.1| pollen allergen [Cryptomeria japonica]
gi|114841643|dbj|BAF32123.1| pollen allergen [Cryptomeria japonica]
gi|114841645|dbj|BAF32124.1| pollen allergen [Cryptomeria japonica]
gi|114841649|dbj|BAF32126.1| pollen allergen [Cryptomeria japonica]
gi|114841655|dbj|BAF32129.1| pollen allergen [Cryptomeria japonica]
gi|114841667|dbj|BAF32135.1| pollen allergen [Cryptomeria japonica]
gi|114841669|dbj|BAF32136.1| pollen allergen [Cryptomeria japonica]
gi|114841671|dbj|BAF32137.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
+FNV+ +GAV DG D ++AF TAW+ AC + +LVP K + F N
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFN 109
>gi|18378969|ref|NP_563654.1| Pectin lyase-like protein [Arabidopsis thaliana]
gi|9972390|gb|AAG10640.1|AC022521_18 Putative polygalacturonase [Arabidopsis thaliana]
gi|66792702|gb|AAY56453.1| At1g02460 [Arabidopsis thaliana]
gi|332189311|gb|AEE27432.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 491
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 108/229 (47%), Gaps = 52/229 (22%)
Query: 35 KSAVLVPP-GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSP 93
KSA++ P +++RF ++ + G++ +S FH GC + + L ITA SP
Sbjct: 212 KSAIVTGPCDSPIALRFFMSSNLRVEGLQIKNSPQFHFRFDGCQGVHVESLHITAPPLSP 271
Query: 94 NTEGIHIGSSNGSEISHSVIATGDDCVSL-----------------GHGISVGSLGKGIN 136
NT+GIHI +SN I +S+I+ GDDCVS+ GHGIS+GSLG +
Sbjct: 272 NTDGIHIENSNSVTIYNSIISNGDDCVSIGSGSYDVDIRNLTCGPGGHGISIGSLGNHNS 331
Query: 137 DEEVVGLTVRNCTF----------------------TGTNIVTNNVENPIVIDQLYCPYN 174
V +TVR+ T NI ++V NPI+IDQ YC
Sbjct: 332 RACVSNITVRDSVIKYSDNGVRIKTWQGGSGSVSGVTFNNIHVDSVRNPIIIDQYYCMTK 391
Query: 175 KCNIKVPSQVKTSNVRFNNIRGT-----------SANKIPCQNIGIGNI 212
C K S V S++ + I+GT ++ +PC N+ + +I
Sbjct: 392 DCANKT-SAVFVSDIAYQGIKGTYDIRSPPMHFGCSDAVPCTNLTLSDI 439
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
++NV+ +GAV DG DD++AF+TAW +CN + +VL+ P Y F+ STI
Sbjct: 88 IYNVRKYGAVGDGETDDTEAFKTAWDSSCNNENNTDSVLLVPYGY-----TFMIQSTIFT 142
Query: 61 IKSVDSRYFHIN 72
++F ++
Sbjct: 143 GPCRSYQFFQVD 154
>gi|449436767|ref|XP_004136164.1| PREDICTED: exopolygalacturonase-like [Cucumis sativus]
Length = 334
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 117/249 (46%), Gaps = 64/249 (25%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS------------- 47
VFN+ GA ADG D ++AF AW +AC+ G + V+ PPG +L+
Sbjct: 66 VFNIIAHGAKADGRTDSTQAFMQAWVKACHSSG-PAKVVFPPGTFLTGPLVYAGPCDGPM 124
Query: 48 ---IRFNFLNDSTITGIKSVDSRYFH----INILGCYNLKLNDLKITAHADSPNTEGIHI 100
I+ + I+ S + F +N++G D ++ A +SPNT+G+HI
Sbjct: 125 TVEIQGTVKATTDISQYSSAEWILFESVTGLNLIGRGTF---DGQV-APGNSPNTDGVHI 180
Query: 101 GSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT 144
++ +++S+I TGDDCVS+ GHGISVGSLGK +++EV G+
Sbjct: 181 SQTDVVNVTNSIIGTGDDCVSIGHGSTNINVLNITCGPGHGISVGSLGKYRDEKEVRGIF 240
Query: 145 VRNCTFTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
V NCT T NIV + V NPI+IDQ Y K ++ +
Sbjct: 241 VSNCTIRNTTNGVRIKTWAASPPGQATRITFQNIVLDKVRNPIIIDQNYGSKTKKSVTIS 300
Query: 182 SQVKTSNVR 190
+ + V+
Sbjct: 301 GEGQRRPVQ 309
>gi|114841591|dbj|BAF32097.1| pollen allergen [Cryptomeria japonica]
gi|114841607|dbj|BAF32105.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV+ +GAV DG D ++AF TAW+ AC SA+L+ PG
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPG 97
>gi|24898906|dbj|BAC23083.1| allergen Cry j 2 [Cryptomeria japonica]
gi|114841647|dbj|BAF32125.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.5 bits (101), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
+FNV+ +GAV DG D ++AF TAW+ AC + +LVP K + F N
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFN 109
>gi|413947914|gb|AFW80563.1| hypothetical protein ZEAMMB73_033652 [Zea mays]
Length = 494
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 55/250 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF N+ T+ G+K +S FHI C + + L I++ A SPNT+GIH+ ++
Sbjct: 228 VALRFFMTNNVTVQGLKVQNSPEFHIRFDSCCGVVASGLSISSPALSPNTDGIHVENTED 287
Query: 106 SEISHSVIATGDDCVSL-----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
I+++ ++ GDDCVS+ GHGIS+GSLGK + V +TVRN
Sbjct: 288 VLITNTAVSNGDDCVSIGAGTRNMHVENVTCGPGGHGISIGSLGKQGSRACVANVTVRNA 347
Query: 149 ------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T+ G N+ + V NPI+IDQ YC C+ S V
Sbjct: 348 VIRHSDNGVRIKTWQGGSGAVSSVSFENVRMDAVRNPIIIDQYYCLSKSCD-NATSAVFV 406
Query: 187 SNVRFNNIRGT-----------SANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S V + IRGT ++ +PC NI + ++ + + ++ P C NV
Sbjct: 407 SGVSYAGIRGTYDPRTTPIHFGCSDAVPCTNITLSDVELLPASGDSTIDNP----FCWNV 462
Query: 236 KPTLFGKQIP 245
+ +P
Sbjct: 463 YGSTATPTVP 472
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
VKDFGAV DG+ DD+ A +TAW AC DG S VL G ++FL +T+
Sbjct: 98 VKDFGAVGDGVTDDTDALKTAWDTACQDDG-DSVVLAAAG------YSFLVHTTV 145
>gi|114841613|dbj|BAF32108.1| pollen allergen [Cryptomeria japonica]
gi|114841659|dbj|BAF32131.1| pollen allergen [Cryptomeria japonica]
gi|114841661|dbj|BAF32132.1| pollen allergen [Cryptomeria japonica]
gi|114841665|dbj|BAF32134.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
+FNV+ +GAV DG D ++AF TAW+ AC + +LVP K + F N
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFN 109
>gi|215766185|dbj|BAG98413.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 271
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 97/196 (49%), Gaps = 39/196 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF ++ T+TGI V+S H+ C + ++DL I++ +SPNT+GIH
Sbjct: 1 MPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDLTISSPENSPNTDGIH 60
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I HS +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 61 LQNSKQVSIHHSNLACGDDCVSIQTGCSDINIHNVNCGPGHGISIGGLGRYNTKACVSNV 120
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PI+IDQ YC C +
Sbjct: 121 TVRDVNMFKTMTGVRIKTWQGGSGLVQGIRFSNIQVSEVQTPIIIDQFYCDRTTCRNQT- 179
Query: 182 SQVKTSNVRFNNIRGT 197
S V V++ NIRGT
Sbjct: 180 SAVAVLGVQYENIRGT 195
>gi|57899119|dbj|BAD86981.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
Length = 410
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF N+ T+ G+K +S FH C ++++ L I++ A SPNT+GIH+ +++
Sbjct: 147 VAMRFAISNNVTVRGLKVQNSPEFHFRFDNCNGVRVDGLSISSPALSPNTDGIHVENTSD 206
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
I+++V++ GDDCVS+ GHGIS+GSLGK V +TVRN
Sbjct: 207 VLITNTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGKAGTKACVANVTVRNAV 266
Query: 149 -----------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T+ G N+ + V NPI+IDQ YC C + + V +
Sbjct: 267 IRHSDNGVRIKTWQGGSGSVSAVAFENVRMDAVRNPIIIDQYYCLSKSCENET-TAVFVN 325
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
V ++ IRGT ++ +PC NI + ++
Sbjct: 326 GVSYSGIRGTYDVRGPPIHFGCSDAVPCTNITLSDV 361
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
VKDFGA DG+ DD+ A +TAW AC DG VL G+ I
Sbjct: 21 VKDFGAAGDGVTDDTDALKTAWDTACADDG-AGVVLAAAGRSFLIH 65
>gi|297802374|ref|XP_002869071.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297314907|gb|EFH45330.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 395
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 127/315 (40%), Gaps = 116/315 (36%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP-------------------- 41
+NV +F A DG DDSKAF AW AC DG +L+P
Sbjct: 24 YNVLNFDAKGDGQTDDSKAFLQAWTAACGGDGDIKTLLIPSDKTFLLQPTVFQGPCKSSS 83
Query: 42 --------------------PGKYLSIRFNFLNDSTITGIKSVDSR---YFHINILG--- 75
P + I+F+ ++ TI G ++DSR ++ +N+
Sbjct: 84 IKVQLDGAIVAPSDKVAWSDPISRMWIKFSTVSGLTIVGSGTIDSRGSSFWELNLKASQR 143
Query: 76 --------CYNLKLN-----------------------DLKITAHADSPNTEGIHIGSSN 104
C NL++N ++ + A SPNT+GI I S
Sbjct: 144 PTALHISKCDNLRINGITSIDSPKNHISIKTCNTVAISNINLFAPETSPNTDGIDISDST 203
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
I S I TGDDC+++ GHGISVGSLG G + +V + V +C
Sbjct: 204 NINIFDSTIQTGDDCIAINSGSSNINITGINCGPGHGISVGSLGAGGAEAKVSDVHVTHC 263
Query: 149 TF----------------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
TF + T+I N +NPI+IDQ Y K + + S V
Sbjct: 264 TFNQTTNGARIKTWLGGQGYARNISFTDITLINTKNPIIIDQQYIDKGKLDGE-ESSVAI 322
Query: 187 SNVRFNNIRGTSANK 201
SNV++ + RGTS+NK
Sbjct: 323 SNVKYVDFRGTSSNK 337
>gi|242041749|ref|XP_002468269.1| hypothetical protein SORBIDRAFT_01g042735 [Sorghum bicolor]
gi|241922123|gb|EER95267.1| hypothetical protein SORBIDRAFT_01g042735 [Sorghum bicolor]
Length = 398
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 112/262 (42%), Gaps = 45/262 (17%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C + V+ P Y F + ++ DS H+ I +N+ ++ L
Sbjct: 135 WINSCKLNKSMRCVIGPTALY----FRRCTHLVVEELEVRDSMQMHVAIAYSWNVVVSKL 190
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA SPNT+GIH+ +S IS I+TGDDC+S+ GHGIS+
Sbjct: 191 LITAPGWSPNTDGIHVSNSREVSISKCTISTGDDCISIVTGSMFVRVTSIFCGPGHGISI 250
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + V + V T GT +I +NV NPI+I
Sbjct: 251 GSLGANNSWAHVSDVLVEKATLLGTTNGVRIKTWQGGHGYAERISFQDISMHNVTNPIII 310
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIPCQNIGIGNINW---VYNGVNVKV 223
DQ YC + + S V N+R+ NI GTSA+K+ I G ++ + + +
Sbjct: 311 DQNYCDSKRPCHEQGSAVAVRNIRYRNIHGTSASKVAVNFICSGALHCDGILMQDIYLVG 370
Query: 224 EGPETTSLCSNVKPTLFGKQIP 245
EG T +N FG P
Sbjct: 371 EGRYATCSYTNATVVQFGYNFP 392
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNF 52
V +V D+GA G ++AF AW EACN +S LVP GK YL + F
Sbjct: 24 VVDVDDYGAGDAGGDHVTEAFLEAWSEACNSSDDRSVFLVPEGKAYLLMPVIF 76
>gi|115465629|ref|NP_001056414.1| Os05g0578600 [Oryza sativa Japonica Group]
gi|113579965|dbj|BAF18328.1| Os05g0578600, partial [Oryza sativa Japonica Group]
Length = 312
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/196 (34%), Positives = 97/196 (49%), Gaps = 39/196 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF ++ T+TGI V+S H+ C + ++DL I++ +SPNT+GIH
Sbjct: 42 MPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDLTISSPENSPNTDGIH 101
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I HS +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 102 LQNSKQVSIHHSNLACGDDCVSIQTGCSDINIHNVNCGPGHGISIGGLGRYNTKACVSNV 161
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PI+IDQ YC C +
Sbjct: 162 TVRDVNMFKTMTGVRIKTWQGGSGLVQGIRFSNIQVSEVQTPIIIDQFYCDRTTCRNQT- 220
Query: 182 SQVKTSNVRFNNIRGT 197
S V V++ NIRGT
Sbjct: 221 SAVAVLGVQYENIRGT 236
>gi|115436094|ref|NP_001042805.1| Os01g0296200 [Oryza sativa Japonica Group]
gi|113532336|dbj|BAF04719.1| Os01g0296200 [Oryza sativa Japonica Group]
gi|125570033|gb|EAZ11548.1| hypothetical protein OsJ_01413 [Oryza sativa Japonica Group]
Length = 503
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF N+ T+ G+K +S FH C ++++ L I++ A SPNT+GIH+ +++
Sbjct: 240 VAMRFAISNNVTVRGLKVQNSPEFHFRFDNCNGVRVDGLSISSPALSPNTDGIHVENTSD 299
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
I+++V++ GDDCVS+ GHGIS+GSLGK V +TVRN
Sbjct: 300 VLITNTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGKAGTKACVANVTVRNAV 359
Query: 149 -----------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T+ G N+ + V NPI+IDQ YC C + + V +
Sbjct: 360 IRHSDNGVRIKTWQGGSGSVSAVAFENVRMDAVRNPIIIDQYYCLSKSCENET-TAVFVN 418
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
V ++ IRGT ++ +PC NI + ++
Sbjct: 419 GVSYSGIRGTYDVRGPPIHFGCSDAVPCTNITLSDV 454
Score = 43.1 bits (100), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
VKDFGA DG+ DD+ A +TAW AC DG VL G+ I
Sbjct: 114 VKDFGAAGDGVTDDTDALKTAWDTACADDG-AGVVLAAAGRSFLIH 158
>gi|125525509|gb|EAY73623.1| hypothetical protein OsI_01510 [Oryza sativa Indica Group]
Length = 503
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF N+ T+ G+K +S FH C ++++ L I++ A SPNT+GIH+ ++
Sbjct: 240 VAMRFAISNNVTVRGLKVQNSPEFHFRFDNCNGVRVDGLSISSPALSPNTDGIHVENTQD 299
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
I+++V++ GDDCVS+ GHGIS+GSLGK V +TVRN
Sbjct: 300 VLITNTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGKAGTKACVANVTVRNAV 359
Query: 149 -----------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T+ G N+ + V NPI+IDQ YC C + + V +
Sbjct: 360 IRHSDNGVRIKTWQGGSGSVSAVAFENVRMDAVRNPIIIDQYYCLSKSCENET-TAVFVN 418
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
V ++ IRGT ++ +PC NI + ++
Sbjct: 419 GVSYSGIRGTYDVRGPPIHFGCSDAVPCTNITLSDV 454
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
VKDFGA DG+ DD+ A +TAW AC DG VL G+ I
Sbjct: 114 VKDFGAAGDGVTDDTDALKTAWDTACADDG-AGVVLAAAGRSFLIH 158
>gi|210063113|gb|ACJ06507.1| polygalacturonase [Diospyros kaki]
Length = 441
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 122/275 (44%), Gaps = 65/275 (23%)
Query: 23 TAWREACNWDGIKSAVLVPPGKYLSIRFNFLN--DSTITGIKSVDSRYFHINILGCYNLK 80
T W +C I A+ P K F N + + +K ++ H++ N++
Sbjct: 177 TWWENSCK---INKAL---PCKDAPTALTFYNCKNIIVKNLKIQHAQQIHLSFEKSTNVQ 230
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
+ L +T+ SPNT+GIHI ++ +IS VI TGDDC+S+ GH
Sbjct: 231 ASSLTVTSPQTSPNTDGIHITNTQNIQISSCVIGTGDDCISIVSGSQKVKATDITCGPGH 290
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVEN 162
GIS+GSLG G + V + V GT N+ NNV+N
Sbjct: 291 GISIGSLGSGNSKAFVSDVLVNGAKLYGTQNGVRIKTWQGGSGIASNIKFLNVQMNNVDN 350
Query: 163 PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNI 212
PI+IDQ YC +K + S V+ ++ + NI+GTSA+ + PC+ I
Sbjct: 351 PIIIDQNYCDQDKPCKEQGSSVQVKDMLYQNIQGTSASDVAINFSCCKDFPCEGI----- 405
Query: 213 NWVYNGVNVKVEG--PETTSLCSNVKPTLFGKQIP 245
V VN++ EG + C+NVK + G P
Sbjct: 406 --VLQSVNIRREGAVAAAKASCNNVKLSETGAVAP 438
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRF 50
++ DFGA DG DD++AF+ AW +A + + +LVP KYL IRF
Sbjct: 75 SIDDFGAKGDG-SDDTQAFKNAW-QAARSSSVAATLLVPKKKYLVKPIRF 122
>gi|114841579|dbj|BAF32091.1| pollen allergen [Cryptomeria japonica]
gi|114841603|dbj|BAF32103.1| pollen allergen [Cryptomeria japonica]
gi|114841619|dbj|BAF32111.1| pollen allergen [Cryptomeria japonica]
gi|114841651|dbj|BAF32127.1| pollen allergen [Cryptomeria japonica]
gi|114841657|dbj|BAF32130.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G++ ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLRLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV+ +GAV DG D ++AF TAW+ AC SA+L+ PG
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPG 97
>gi|414877180|tpg|DAA54311.1| TPA: polygalacturonase [Zea mays]
Length = 499
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 51/218 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF N+ T+ G+K +S FHI C + + L I++ A SPNT+GIH+ ++
Sbjct: 234 VALRFFMTNNVTVQGLKVQNSPEFHIRFDSCRGVVASGLSISSPALSPNTDGIHVENTQD 293
Query: 106 SEISHSVIATGDDCVSL-----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
I+++ ++ GDDCVS+ GHGIS+GSLGK + V +TVRN
Sbjct: 294 VLITNTAVSNGDDCVSIGAGTLNMHVENVTCGPGGHGISIGSLGKQGSRACVANVTVRNA 353
Query: 149 ------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T+ G N+ + V NPI+IDQ YC C S V
Sbjct: 354 VIRHSDNGVRIKTWQGGSGAVSSVSFQNVRMDAVRNPIIIDQYYCLSKSCE-NATSAVFV 412
Query: 187 SNVRFNNIRGT-----------SANKIPCQNIGIGNIN 213
S V + IRGT ++ +PC NI + ++
Sbjct: 413 SGVSYAGIRGTYDPRTPPIHFGCSDAVPCTNITLSDVE 450
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
VKDFGAV DG+ DD+ A +TAW AC DG S VL G ++FL +T+
Sbjct: 104 VKDFGAVGDGVTDDTGAIKTAWDTACQDDG-ASVVLAAAG------YSFLVHTTV 151
>gi|24898908|dbj|BAC23084.1| allergen Cry j 2 [Cryptomeria japonica]
Length = 514
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G++ ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLRLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV+ +GAV DG D ++AF TAW+ AC SA+L+ PG
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPG 97
>gi|302773968|ref|XP_002970401.1| hypothetical protein SELMODRAFT_93668 [Selaginella moellendorffii]
gi|300161917|gb|EFJ28531.1| hypothetical protein SELMODRAFT_93668 [Selaginella moellendorffii]
Length = 383
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 55/241 (22%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG- 116
++GI+ +S+ ++ + C+++ + ++I +SPNT+GIHI SS I H+ I TG
Sbjct: 148 LSGIRIQNSQQMNVAFVSCHDVIVARIRIENPQNSPNTDGIHIESSMNVTIEHAAIGTGS 207
Query: 117 DDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------- 153
DDCVS+ GHGIS+GSLGKG + V + V GT
Sbjct: 208 DDCVSIGSGSSNVVIRDCECGPGHGISIGSLGKGESAAYVSSVLVHRLQINGTMNGLRIK 267
Query: 154 ---------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS 198
N+ + V NPI+IDQ YC + S V+ +V + +IRGTS
Sbjct: 268 TWQGGRGSASNIRFENVSMSGVANPIIIDQNYCDALRPCSPQGSAVQVKSVEYLHIRGTS 327
Query: 199 ANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
A I PC ++ + +IN + G + ++ CSN G +PA+C
Sbjct: 328 ATAIATIFDCSASLPCLDLLLHDINL------TQSSGAQASASCSNAFGVSSGSVVPASC 381
Query: 249 V 249
+
Sbjct: 382 L 382
>gi|226491171|ref|NP_001150436.1| polygalacturonase precursor [Zea mays]
gi|195639244|gb|ACG39090.1| polygalacturonase precursor [Zea mays]
Length = 499
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 103/218 (47%), Gaps = 51/218 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF N+ T+ G+K +S FHI C + + L I++ A SPNT+GIH+ ++
Sbjct: 234 VALRFFMTNNVTVQGLKVQNSPEFHIRFDSCRGVVASGLSISSPALSPNTDGIHVENTQD 293
Query: 106 SEISHSVIATGDDCVSL-----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
I+++ ++ GDDCVS+ GHGIS+GSLGK + V +TVRN
Sbjct: 294 VLITNTAVSNGDDCVSIGAGTLNMHVENVTCGPGGHGISIGSLGKQGSRACVANVTVRNA 353
Query: 149 ------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T+ G N+ + V NPI+IDQ YC C S V
Sbjct: 354 VIRHSDNGVRIKTWQGGSGAVSSVSFQNVRMDAVRNPIIIDQYYCLSKSCE-NATSAVFV 412
Query: 187 SNVRFNNIRGT-----------SANKIPCQNIGIGNIN 213
S V + IRGT ++ +PC NI + ++
Sbjct: 413 SGVSYAGIRGTYDPRTPPIHFGCSDAVPCTNITLSDVE 450
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
VK FGAV DG+ DD+ A +TAW AC DG S VL G ++FL +T+
Sbjct: 104 VKGFGAVGDGLTDDTGAIKTAWDTACQDDG-ASVVLAAAG------YSFLVHTTV 151
>gi|22329093|ref|NP_680757.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332660648|gb|AEE86048.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 486
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 41/184 (22%)
Query: 60 GIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDC 119
G+ ++S HI+IL C N+ L++ + A DSPNT+GI I SN I +S I TGDDC
Sbjct: 123 GLTQMNSPKNHISILDCTNVTLSNFHLIAPKDSPNTDGIDIAHSNNIRIFNSSIQTGDDC 182
Query: 120 VSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---------- 153
+++ GHGIS+GSLG+ ++ V + +R+C+F GT
Sbjct: 183 IAINGGSYDINITHVACGPGHGISIGSLGRYSVNDTVQNVKIRHCSFNGTENGARIKTWT 242
Query: 154 --------------NIVTNNVENPIVIDQLYC-PYNKCNIKVPSQVKTSNVRFNNIRGTS 198
NI + + PI+IDQ YC + C + + VK SNV F GT
Sbjct: 243 VRGGLGVAKNILYENITLTDTKYPIIIDQHYCNGGHNCTKEAMTAVKVSNVTFRYFTGTC 302
Query: 199 ANKI 202
AN I
Sbjct: 303 ANDI 306
>gi|297827843|ref|XP_002881804.1| hypothetical protein ARALYDRAFT_483267 [Arabidopsis lyrata subsp.
lyrata]
gi|297327643|gb|EFH58063.1| hypothetical protein ARALYDRAFT_483267 [Arabidopsis lyrata subsp.
lyrata]
Length = 433
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 107/219 (48%), Gaps = 47/219 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDST--ITGIKSVDSRYFHINILGCYNL 79
ET W+ +C + K P F N + + ++ +++ I+I N+
Sbjct: 173 ETWWQNSCKRNKAKPCTKAPTA------LTFYNSKSLIVENLRVRNAQQIQISIEKSSNV 226
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------G 123
+++++ +TA ADSPNT+GIHI ++ +S S+I TGDDC+S+ G
Sbjct: 227 QVSNVVVTAPADSPNTDGIHITNTQNIRVSDSIIGTGDDCISIESGSQNVQINDITCGPG 286
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVE 161
HGIS+GSLG + V G+TV +GT NI NV+
Sbjct: 287 HGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMENVK 346
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN 200
NPI+IDQ YC +KC + S V+ NV + NI GTSA+
Sbjct: 347 NPIIIDQDYCDKSKCTSQ-QSAVQVKNVVYRNISGTSAS 384
Score = 40.8 bits (94), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+V D+GA DG DD++AF AW++AC+ +G + +LVP G FL +TG
Sbjct: 69 SVSDYGAKGDGKTDDTQAFVNAWKKACSSNGAVN-LLVPKGNTY-----FLKSIQLTG 120
>gi|357511459|ref|XP_003626018.1| Polygalacturonase [Medicago truncatula]
gi|355501033|gb|AES82236.1| Polygalacturonase [Medicago truncatula]
Length = 462
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 101/216 (46%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF ++ T+ G+K +S F+ C N+ + + ITA SPNT+GIH+ +N
Sbjct: 199 IAIRFFMSSNLTVKGLKVKNSPQFNFRFDACNNVHIESIYITAPKISPNTDGIHLEYAND 258
Query: 106 SEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT 149
+I +SVI+ GDDCVS+G HGIS+GSLG V +TVR+
Sbjct: 259 VKIYNSVISNGDDCVSIGTGSYDVDIKNITCGPSHGISIGSLGNHNTKACVSNITVRDSI 318
Query: 150 F----------------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T NI +V NPI+IDQ YC C K S V S
Sbjct: 319 IKMSDNGIRIKTWQGGSGSVSGVTFNNIHMISVRNPIIIDQYYCLTKDCTNKT-SAVSVS 377
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
N+ + NI+GT ++ +PC NI + I
Sbjct: 378 NILYTNIKGTYDIKSPPMHFACSDSVPCTNITLSEI 413
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
+F+V+ FGA+ DGI+DD+++F+ AW AC + +LVP G F+F+ STI
Sbjct: 66 IFDVRSFGAIGDGIEDDTESFKMAWDTACQNGSDVNVILVPQG------FSFVIQSTI 117
>gi|297801608|ref|XP_002868688.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314524|gb|EFH44947.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 410
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 95/204 (46%), Gaps = 49/204 (24%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I+ I DS F +++ + + L ITA DSPNT+GIHI S + S I TGD
Sbjct: 159 ISNIMVKDSPNFQMSLEDSKWVIVKQLTITADGDSPNTDGIHIQRSQNVIVYESNIRTGD 218
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG+ E V + VR+CTF T
Sbjct: 219 DCISIGDGSKYVNISRISCGPGHGISIGSLGRYGTKETVENVVVRDCTFRETTNGVRIKT 278
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
I + PI+IDQ YCP+++C + V+ NV +N+I GTS
Sbjct: 279 WQGGRGHVRNVLFERIKLHGATRPIIIDQFYCPHSQCKNHTRA-VEIKNVMYNHIHGTSI 337
Query: 200 NK----------IPCQNIGIGNIN 213
K +PC+ I + +IN
Sbjct: 338 KKPFVQLLCSKSVPCRGIFMNDIN 361
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
FNV ++GA+ DG DDSKAF+ AW + CN+ G +S + +P G
Sbjct: 36 FNVLNYGAIGDGFSDDSKAFKDAWEDTCNYIGSQSTMEIPEG 77
>gi|147839923|emb|CAN61695.1| hypothetical protein VITISV_029441 [Vitis vinifera]
Length = 1581
Score = 94.7 bits (234), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 38/165 (23%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
F N+ + G+ ++S+ HI++ G + ++ L ITA SPNT+GI I S +S
Sbjct: 142 FYSCNNLLLQGLNFINSQRNHISVSGSNGVTISHLTITAPDSSPNTDGIDISHSKNVRVS 201
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
S I TGDDC++ GHGIS+GSLG G +V + V +C+F GT
Sbjct: 202 DSTIGTGDDCIAFGDQTSQVFVKGVACGPGHGISIGSLGVGGASAQVEEIHVDSCSFKGT 261
Query: 154 ----------------------NIVTNNVENPIVIDQLYCPYNKC 176
NI + ENPI+IDQ YCP++ C
Sbjct: 262 QNGARIKTWQGGSGYARKITFNNIKLEDAENPIIIDQYYCPHSVC 306
>gi|356532486|ref|XP_003534803.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 474
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 39/194 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ++ ++G+K +S FH+ GC + ++ L I++ SPNT+GIH+G++ G
Sbjct: 211 IRFFMSSNLVLSGVKIQNSPMFHVKFDGCQGVLIDKLSISSPKLSPNTDGIHLGNTRGVG 270
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S+I+ GDDC+S+G HGIS+GSLG + V LTVRN
Sbjct: 271 IYNSMISNGDDCISIGPGCSDVDIEGVTCAPTHGISIGSLGVHNSQACVSNLTVRNTIIK 330
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N I+IDQ YC +C + S V ++V
Sbjct: 331 ESDNGLRIKTWQGGTGSVTGLRFENIQMENVRNCIIIDQYYCMSKEC-LNQTSAVHVNDV 389
Query: 190 RFNNIRGTSANKIP 203
+ NI+GT + P
Sbjct: 390 TYRNIKGTYDVRTP 403
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
+F+V+ FGAV DG DD+ AF AW+EAC ++S V++ P
Sbjct: 77 IFDVRSFGAVGDGSADDTDAFVAAWKEAC---AVESGVVLVP 115
>gi|356555962|ref|XP_003546297.1| PREDICTED: polygalacturonase At1g48100-like isoform 1 [Glycine max]
Length = 479
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 39/194 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ++ ++G+K +S FH+ GC + ++ L I++ SPNT+GIH+G++ G
Sbjct: 216 IRFFMSSNLVLSGVKIQNSPMFHVKFDGCQGVLIDKLSISSPKLSPNTDGIHLGNTRGVG 275
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S+I+ GDDC+S+G HGIS+GSLG + V LTVRN
Sbjct: 276 IYNSMISNGDDCISIGPGCSDVDIEGVTCAPTHGISIGSLGVHNSQACVSNLTVRNTIIK 335
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N I+IDQ YC +C + S V ++V
Sbjct: 336 ESDNGLRIKTWQGGTGSVTGLRFENIQMENVRNCIIIDQYYCMSKEC-LNQTSAVHVNDV 394
Query: 190 RFNNIRGTSANKIP 203
+ NI+GT + P
Sbjct: 395 TYRNIKGTYDVRTP 408
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+F+V+ FGAV DG DD+ AF AW+EAC ++S V++ P Y
Sbjct: 82 IFDVRSFGAVGDGSADDTDAFVAAWKEAC---AVESGVVLVPEDY 123
>gi|356555964|ref|XP_003546298.1| PREDICTED: polygalacturonase At1g48100-like isoform 2 [Glycine max]
Length = 483
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 98/194 (50%), Gaps = 39/194 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ++ ++G+K +S FH+ GC + ++ L I++ SPNT+GIH+G++ G
Sbjct: 220 IRFFMSSNLVLSGVKIQNSPMFHVKFDGCQGVLIDKLSISSPKLSPNTDGIHLGNTRGVG 279
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S+I+ GDDC+S+G HGIS+GSLG + V LTVRN
Sbjct: 280 IYNSMISNGDDCISIGPGCSDVDIEGVTCAPTHGISIGSLGVHNSQACVSNLTVRNTIIK 339
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N I+IDQ YC +C + S V ++V
Sbjct: 340 ESDNGLRIKTWQGGTGSVTGLRFENIQMENVRNCIIIDQYYCMSKEC-LNQTSAVHVNDV 398
Query: 190 RFNNIRGTSANKIP 203
+ NI+GT + P
Sbjct: 399 TYRNIKGTYDVRTP 412
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+F+V+ FGAV DG DD+ AF AW+EAC ++S V++ P Y
Sbjct: 82 IFDVRSFGAVGDGSADDTDAFVAAWKEAC---AVESGVVLVPEDY 123
>gi|114841653|dbj|BAF32128.1| pollen allergen [Cryptomeria japonica]
Length = 514
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 100/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGTENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.5 bits (101), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLN 54
+FNV+ +GAV DG D ++AF TAW+ AC + +LVP K + F N
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK--NPSAMLLVPGSKKFVVNNLFFN 109
>gi|242052709|ref|XP_002455500.1| hypothetical protein SORBIDRAFT_03g012280 [Sorghum bicolor]
gi|241927475|gb|EES00620.1| hypothetical protein SORBIDRAFT_03g012280 [Sorghum bicolor]
Length = 506
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 103/217 (47%), Gaps = 51/217 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF N+ T+ G+K +S FHI C + + L I++ A SPNT+GIH+ +S
Sbjct: 241 VAMRFFMTNNVTLQGLKVQNSPEFHIRFDSCRGVVASGLSISSPALSPNTDGIHVENSQD 300
Query: 106 SEISHSVIATGDDCVSL-----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
I+++ ++ GDDCVS+ GHGIS+GSLGK + V +TVRN
Sbjct: 301 VVITNTAVSNGDDCVSIGAGTLNMHVENVTCGPGGHGISIGSLGKQGSRACVANVTVRNA 360
Query: 149 ------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T+ G N+ + V NPI+IDQ YC C S V
Sbjct: 361 VIRHSDNGVRIKTWQGGSGAVSAVSFENVRMDAVRNPIIIDQYYCLSKSCE-NATSAVFV 419
Query: 187 SNVRFNNIRGT-----------SANKIPCQNIGIGNI 212
+ V + IRGT ++ +PC NI + ++
Sbjct: 420 NGVSYAGIRGTYDARTPPIHFGCSDAVPCTNITLSDV 456
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
VKDFGAV DG+ DD+ A +TAW AC DG S VL G ++FL ST+
Sbjct: 111 VKDFGAVGDGVTDDTDAVKTAWDTACQDDG-DSVVLAAAG------YSFLVHSTV 158
>gi|357457907|ref|XP_003599234.1| Polygalacturonase [Medicago truncatula]
gi|355488282|gb|AES69485.1| Polygalacturonase [Medicago truncatula]
Length = 437
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 121/251 (48%), Gaps = 54/251 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++ F+ N+ + I+ +++ H+ I GC N+ ++L +TA SPNT+GIHI
Sbjct: 189 GAPTAVTFDECNNLKVDKIRFRNAQQMHLRIQGCNNVWASNLIVTAPGHSPNTDGIHITH 248
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S I++S I TGDDC+S+ GHGIS+GSLG G EV + V
Sbjct: 249 SQNVFITNSTIGTGDDCISIVSGSKNVRATDITCGPGHGISIGSLGGGNTQAEVSNVEVN 308
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
T GT NIV NV NPI+IDQ YC K + S V
Sbjct: 309 RATLIGTTNGVRIKTWQGGSGYARNIKFINIVVRNVTNPIIIDQKYCDQKKKCQEQNSAV 368
Query: 185 KTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+ SNV + NI+GTSA++ +PC+ I + ++ G N+K +T + C N
Sbjct: 369 ELSNVMYQNIKGTSASEVAIKLECSKAVPCKGIHLQDVK--ITGENIK----DTIAKCDN 422
Query: 235 VKPTLFGKQIP 245
VK + G P
Sbjct: 423 VKYSNSGMFFP 433
>gi|147801585|emb|CAN74551.1| hypothetical protein VITISV_002518 [Vitis vinifera]
Length = 319
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 119/246 (48%), Gaps = 54/246 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+++F + + G+ ++ + HI + C +N++ I+A +PNT+GI I SSN
Sbjct: 67 ALKFYTCPNLVLQGLTHINPQKAHIILTKCDGANINNITISAPEAAPNTDGIDIASSNHV 126
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGK-GINDEEVVG-LTVRNC 148
++ +S I TGDDC+++ GHGIS+GSLG G D + V + VR+C
Sbjct: 127 QVRNSKIGTGDDCIAISARCSFINITXVTCGPGHGISIGSLGDPGSGDFDTVSEVHVRSC 186
Query: 149 TFTGTN-----------------------IVTNNVENPIVIDQLYCPYNKC-NIKVPSQV 184
FTG N IV +NV PIVIDQ YCP N C N S +
Sbjct: 187 NFTGRNTTGVRIKTWQGGEGEVKKITYEDIVFDNVRYPIVIDQFYCPNNACKNHSGTSAL 246
Query: 185 KTSNVRFNNIRGTSA-NKIPCQNIGIGNI--NWVYNGVNVKVEGPETTSL---------C 232
S+V + I GTS+ +++ N G N N V + +++K P T+
Sbjct: 247 AISDVLYTRITGTSSGDEVISLNCGTRNSCNNIVLDDIHLKSSDPTKTAYAHCLNVNGRA 306
Query: 233 SNVKPT 238
SNV+P+
Sbjct: 307 SNVEPS 312
>gi|449436769|ref|XP_004136165.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Cucumis
sativus]
Length = 400
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 100/214 (46%), Gaps = 30/214 (14%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+SI+F LN + + G+ S++S FH ++ CYN ++KI A +S NT G+HI +S
Sbjct: 206 ISIKFTRLNHTIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSSNTNGMHISTSTL 265
Query: 106 SEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIV 165
+ + I + + S V GL R +IV NV+NPI+
Sbjct: 266 VXVKNCTIFNATNGARIKTWAS-----------PVSGLASR---IIFEDIVMYNVKNPII 311
Query: 166 IDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWV 215
IDQ Y K S K SNV+F NIRGTS + PC+ + + +IN
Sbjct: 312 IDQTY----GTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRDINLS 367
Query: 216 YNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
Y G N++ S CSN K FG + P CV
Sbjct: 368 YGGTNLR--NTTIVSSCSNAKIATFGVKNPPPCV 399
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 24/46 (52%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VF+V GA DG DD+ AF T W AC + L+P G +L
Sbjct: 83 VFDVTKHGAKGDGETDDAHAFMTTWIAACRNTVGPTKFLIPQGTFL 128
>gi|62910157|gb|AAY21049.1| PGN [Glycine max]
Length = 402
Score = 94.0 bits (232), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 117/234 (50%), Gaps = 51/234 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + ++G+ ++S HI+I C N ++ + + A +SPNT+GI I S+
Sbjct: 157 ALHFRECDYLFLSGLTHINSPKNHISINRCNNSLISKIHMIAPDESPNTDGIDISQSSNI 216
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +S + TGDDC+++ GHGIS+GSLGK + V + VRNCTF
Sbjct: 217 VIKNSKMETGDDCIAINHGSTFISIIGVFCGPGHGISIGSLGKNGAHQTVEEIYVRNCTF 276
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T +I+ NP++IDQ Y PY+ V+ S+
Sbjct: 277 NRTTNGARIKTWIGGQGYARKITFKDIILMEATNPVIIDQQYNPYDNV-----GGVRVSD 331
Query: 189 VRFNNIRGTSAN----KIPC-QNIGIGNINWVYNGVNV-KVEGPETTSLCSNVK 236
V ++N+RGTS++ K+ C +++G NI G+N+ + G +T + C NVK
Sbjct: 332 VSYHNVRGTSSSMHAIKLHCDKSVGCTNIE--LKGINITTITGKKTYASCKNVK 383
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV D+GA +G DDS+AF AW++ACN + +L+P K ++
Sbjct: 30 FNVIDYGATGNGQTDDSQAFLKAWKDACNASYGTATLLIPKEKTFMLQ 77
>gi|449434943|ref|XP_004135255.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
sativus]
Length = 610
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 111/250 (44%), Gaps = 54/250 (21%)
Query: 12 DGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHI 71
DG+ D S E W E+C + + P + N + G+ +S+ H
Sbjct: 303 DGVIDGSG--EKWWAESCKKNKSRPCKGAPTALTIDSSSNI----RVKGLTIQNSQQMHF 356
Query: 72 NILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--------- 122
I +++ ++++A DSPNT+GIHI S + + I+TGDDC+S+
Sbjct: 357 TIARSETVRITGVRVSAPGDSPNTDGIHITQSTNVVVQNCKISTGDDCISIVNASSGIKM 416
Query: 123 -------GHGISVGSLGK----GINDEEVVGLT--------VRNCTFTG----------T 153
GHGIS+GSLGK GI + V+ VR T+ G
Sbjct: 417 KGISCGPGHGISIGSLGKDNSTGIVTKVVLDTAYLRETTNGVRIKTWQGGSGYVRAVRFE 476
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IP 203
N+ +VENPI+IDQ YC S VK S + + NI GT+ +K +P
Sbjct: 477 NVRMEDVENPIIIDQFYCDSPTTCESQTSAVKISQIMYRNISGTTTSKNAMKFACSDSVP 536
Query: 204 CQNIGIGNIN 213
C NI + N+N
Sbjct: 537 CSNIILSNVN 546
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL 46
+ NV F A+ DG+ DD+ AF AW AC+ KS +LVP K YL
Sbjct: 206 LMNVDSFDAIGDGVTDDTMAFRKAWETACSTS--KSVLLVPKEKTYL 250
>gi|449478579|ref|XP_004155358.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
sativus]
Length = 610
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 111/250 (44%), Gaps = 54/250 (21%)
Query: 12 DGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHI 71
DG+ D S E W E+C + + P + N + G+ +S+ H
Sbjct: 303 DGVIDGSG--EKWWAESCKKNKSRPCKGAPTALTIDSSSNI----RVKGLTIQNSQQMHF 356
Query: 72 NILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--------- 122
I +++ ++++A DSPNT+GIHI S + + I+TGDDC+S+
Sbjct: 357 TIARSETVRITGVRVSAPGDSPNTDGIHITQSTNVVVQNCKISTGDDCISIVNASSGIKM 416
Query: 123 -------GHGISVGSLGK----GINDEEVVGLT--------VRNCTFTG----------T 153
GHGIS+GSLGK GI + V+ VR T+ G
Sbjct: 417 KGISCGPGHGISIGSLGKDNSTGIVTKVVLDTAYLRETTNGVRIKTWQGGSGYVRAVRFE 476
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IP 203
N+ +VENPI+IDQ YC S VK S + + NI GT+ +K +P
Sbjct: 477 NVRMEDVENPIIIDQFYCDSPTTCESQTSAVKISQIMYRNISGTTTSKNAMKFACSDSVP 536
Query: 204 CQNIGIGNIN 213
C NI + N+N
Sbjct: 537 CSNIILSNVN 546
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL 46
+ NV F A+ DG+ DD+ AF AW AC+ KS +LVP K YL
Sbjct: 206 LMNVDSFDAIGDGVTDDTMAFRKAWETACSTS--KSVLLVPKDKTYL 250
>gi|42562835|ref|NP_564758.2| Pectin lyase-like protein [Arabidopsis thaliana]
gi|2462753|gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana]
gi|332195579|gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 540
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 55/235 (23%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R NW +P K ++RF D T+TGI +S H+ C + ++D+
Sbjct: 263 RSELNWR-------MPSIKPTALRFYGSIDVTVTGITIQNSPQCHLKFDNCVKVLVHDVN 315
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+++ DSPNT+GIH+ ++ I + +A GDDC+S+ GHGIS+G
Sbjct: 316 VSSPGDSPNTDGIHLQNTRDVMIHTTTLACGDDCISIQTGCSNVYVHNVNCGPGHGISIG 375
Query: 130 SLGKGINDEEVVGLTVRNC----TFTG------------------TNIVTNNVENPIVID 167
SLGK V +TVR+ T TG +NI V+ PIVID
Sbjct: 376 SLGKDSTKACVSNITVRDVVMHNTMTGVRIKTWQGGIGSVKGILFSNIQLTEVQLPIVID 435
Query: 168 QLYCPYNKCNIKVPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
Q YC ++KC + S V V + IRGT ++ PC ++ + I
Sbjct: 436 QFYCDHSKC-MNHTSAVSVEGVTYEKIRGTYTVKPVHFACSDSFPCIDVQLSGIE 489
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
FNV DFGA DG+ DD++AFE AW AC + S +++PP
Sbjct: 123 FNVLDFGAKGDGMSDDTQAFEAAWASACKVEA--STMIIPP 161
>gi|449446684|ref|XP_004141101.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449489467|ref|XP_004158321.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 477
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 107/231 (46%), Gaps = 48/231 (20%)
Query: 30 NWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 89
N D S +P K ++RF ++ T++GI +S+ H+ C ++++ L I++
Sbjct: 204 NLDKESSGGELPSTKPTALRFYGSDEVTVSGITIQNSQKAHLKFDSCTAVQVSSLTISSP 263
Query: 90 ADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGK 133
DSPNT+GIH+ +S IS+S IA GDDC+S+ GHGIS+G LG+
Sbjct: 264 GDSPNTDGIHLQNSQNVIISNSNIACGDDCISIQTGSSGVYIHNVNCGPGHGISIGGLGR 323
Query: 134 GINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVIDQLYC 171
V +TVR+ T NI +V+ PI+IDQ YC
Sbjct: 324 DDTKACVSNVTVRDVKLQNTMNGVRIKTWQGGSGLVQGILFSNIQVTDVQTPIMIDQYYC 383
Query: 172 PYNKCNIKVPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
+C+ S V S V + NIRGT ++ +PC + + I
Sbjct: 384 DGGRCH-NGSSAVAISGVNYVNIRGTYTSTPVHFACSDSLPCTGVTLDTIQ 433
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
FNV DFGA DG DD+KAF++AW ACN +G S V VP G
Sbjct: 85 FNVLDFGAKGDGETDDTKAFQSAWESACNVEG--SVVEVPSG 124
>gi|6624205|dbj|BAA88472.1| polygalacturonase [Cucumis sativus]
Length = 435
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 114/250 (45%), Gaps = 54/250 (21%)
Query: 12 DGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHI 71
DG+ D S E W E+C K+ G ++ + ++ + G+ +S+ H
Sbjct: 162 DGVIDGSG--EKWWAESCK----KNKSRPCKGAPTALTIDSSSNIRVKGLTIQNSQQMHF 215
Query: 72 NILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--------- 122
I +++ ++++A DSPNT+GIHI S + + I+TGDDC+S+
Sbjct: 216 TIARSETVRITGVRVSAPGDSPNTDGIHITQSTNVVVQNCKISTGDDCISIVNASSGIKM 275
Query: 123 -------GHGISVGSLGK----GINDEEVVGLT--------VRNCTFTG----------T 153
GHGIS+GSLGK GI + V+ VR T+ G
Sbjct: 276 KGISCGPGHGISIGSLGKDNSTGIVTKVVLDTAYLRETTNGVRIKTWQGGSGYVRAVRFE 335
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IP 203
N+ +VENPI+IDQ YC S VK S + + NI GT+ +K +P
Sbjct: 336 NVRMEDVENPIIIDQFYCDSPTTCESQTSAVKISQIMYRNISGTTTSKNAMKFACSDSVP 395
Query: 204 CQNIGIGNIN 213
C NI + N+N
Sbjct: 396 CSNIILSNVN 405
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL 46
+ NV F A+ DG+ DD+ AF AW AC+ KS +LVP K YL
Sbjct: 65 LMNVDSFDAIGDGVTDDTMAFRKAWETACSTS--KSVLLVPKEKTYL 109
>gi|224104077|ref|XP_002313308.1| predicted protein [Populus trichocarpa]
gi|222849716|gb|EEE87263.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 54/236 (22%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ ++ +++ H++ C N++ +L + A SPNT+GIH+ + I + VI TGD
Sbjct: 144 VANLRFQNAQQMHLSFQNCVNVRALNLMVIAPGTSPNTDGIHVTGTQNIRIRNCVIRTGD 203
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG + EV + V T +GT
Sbjct: 204 DCISIVSGSKNVEATDITCGPGHGISIGSLGADNSGAEVSNVFVNRATISGTTNGVRIKT 263
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
N+V NV NPI+I+Q YC + + S V+ SNV + NI+GTSA
Sbjct: 264 WQGGSGYARNIVFQNVVMRNVTNPIIINQNYCDQDSPCEEQTSAVQISNVMYKNIKGTSA 323
Query: 200 NK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
+ IPC+ I + ++N E + + C+NV G P
Sbjct: 324 SDVAVKFDCSKNIPCRGILLQDVNIALE------ENGKPEASCANVNLRKRGDVFP 373
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
V NV DFGA ADG DDS+AF+ AW EAC+ G SA++V P
Sbjct: 8 VVNVDDFGAKADGT-DDSQAFKKAWEEACSSKG--SAIIVIP 46
>gi|224068659|ref|XP_002302793.1| predicted protein [Populus trichocarpa]
gi|222844519|gb|EEE82066.1| predicted protein [Populus trichocarpa]
Length = 457
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 102/208 (49%), Gaps = 43/208 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+IRF ++ TI G+K +S F++ C N+ + + ITA A SPNT+GIHI ++NG
Sbjct: 202 AIRFFMSSNLTIHGLKIKNSPQFNLRFDNCKNVHVESIHITAPALSPNTDGIHIENTNGV 261
Query: 107 EISHSVIATGDDCVSL---------GHGISVGSLGKGINDEEVVGLTVRNCT-------- 149
I +SVI+ G C + HGIS+GSLG + V +TVR+
Sbjct: 262 GIYNSVISNGSGCFDVDIENITCGPSHGISIGSLGNHNSRACVSNITVRDSVIRVSDNGV 321
Query: 150 --------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIR 195
T +NI +NV NPI+IDQ YC +C + S V S + + NI+
Sbjct: 322 RIKTWQGGSGAVSGITFSNIHMDNVRNPIIIDQFYCLTKRCANQT-SAVSVSEILYENIK 380
Query: 196 GT-----------SANKIPCQNIGIGNI 212
GT ++ +PC NI + ++
Sbjct: 381 GTYNIRSPPMHFACSDSLPCTNITLSDV 408
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
VF+V++FGA+ DGI DD+ AF+ AW ACN + +LVP G F+F+ STI
Sbjct: 68 VFDVRNFGAIGDGIIDDTDAFKMAWDAACN-QVDPAVILVPYG------FDFMIQSTIFS 120
Query: 61 IKSVDSRYFHIN 72
D F ++
Sbjct: 121 GPCKDGLVFQVD 132
>gi|87162928|gb|ABD28723.1| Glycoside hydrolase, family 28 [Medicago truncatula]
Length = 392
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 141/363 (38%), Gaps = 131/363 (36%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR------------ 49
FNV +GAV DG +DS AF AW++ CN S +++P K +R
Sbjct: 16 FNVLQYGAVGDGKTNDSPAFLKAWKDVCNSKSGTSRLIIPAAKTFLLRPIAFRGPCKSNY 75
Query: 50 ----------------------------FNFLNDSTITGIKSVDSR---YFHINILG--- 75
F+F+N I+G +VD R ++ +G
Sbjct: 76 IYIELSGNIIAPKTKSEYSGSPINTWIGFSFVNGLIISGKGTVDGRGSMWWKQPCIGNPP 135
Query: 76 ---------------CYNLKL-----------------------NDLKITAHADSPNTEG 97
CY ++ +++++ A +SPNT+G
Sbjct: 136 PGTSCRPPTAITLNRCYRFQIKGYTSINPARSHITLTSCKKGIISNIRLIAPGESPNTDG 195
Query: 98 IHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV 141
I I +S ++ +S IATGDDC+++ GHGIS+GSLG + + V
Sbjct: 196 IDISASRDIQVLNSFIATGDDCIAISAGSSVIKITAITCGPGHGISIGSLGARGDTDIVE 255
Query: 142 GLTVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIK 179
+ V+NCT T T NI NPI IDQ YC
Sbjct: 256 DVHVKNCTLTETLTGVRIKTKQGGGGFARRITFENIKFVRAHNPIWIDQFYCVNQMVCRN 315
Query: 180 VPSQVKTSNVRFNNIRGTS----ANKIPC-QNIGIGNINWVYNGVNVKVEGPETT--SLC 232
+ +K S+V + I GTS A + C QN+G N+ V++ V V+ P+ S C
Sbjct: 316 MTKAIKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNL--VFDRVYVRSAVPKMKVFSFC 373
Query: 233 SNV 235
N
Sbjct: 374 HNA 376
>gi|16974585|gb|AAL31197.1| At1g60590/F8A5_12 [Arabidopsis thaliana]
gi|23308417|gb|AAN18178.1| At1g60590/F8A5_12 [Arabidopsis thaliana]
Length = 474
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 55/235 (23%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R NW +P K ++RF D T+TGI +S H+ C + ++D+
Sbjct: 197 RSELNWR-------MPSIKPTALRFYGSIDVTVTGITIQNSPQCHLKFDNCVKVLVHDVN 249
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+++ DSPNT+GIH+ ++ I + +A GDDC+S+ GHGIS+G
Sbjct: 250 VSSPGDSPNTDGIHLQNTRDVMIHTTTLACGDDCISIQTGCSNVYVHNVNCGPGHGISIG 309
Query: 130 SLGKGINDEEVVGLTVRNC----TFTG------------------TNIVTNNVENPIVID 167
SLGK V +TVR+ T TG +NI V+ PIVID
Sbjct: 310 SLGKDSTKACVSNITVRDVVMHNTMTGVRIKTWQGGIGSVKGILFSNIQLTEVQLPIVID 369
Query: 168 QLYCPYNKCNIKVPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
Q YC ++KC + S V V + IRGT ++ PC ++ + I
Sbjct: 370 QFYCDHSKC-MNHTSAVSVEGVTYEKIRGTYTVKPVHFACSDSFPCIDVQLSGIE 423
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
FNV DFGA DG+ DD++AFE AW AC + S +++PP
Sbjct: 57 FNVLDFGAKGDGMSDDTQAFEAAWASACKVEA--STMIIPP 95
>gi|297837451|ref|XP_002886607.1| hypothetical protein ARALYDRAFT_893483 [Arabidopsis lyrata subsp.
lyrata]
gi|297332448|gb|EFH62866.1| hypothetical protein ARALYDRAFT_893483 [Arabidopsis lyrata subsp.
lyrata]
Length = 538
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 106/235 (45%), Gaps = 55/235 (23%)
Query: 26 REACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLK 85
R NW +P K ++RF D T+TGI +S H+ C + ++D+
Sbjct: 261 RSELNWR-------MPSIKPTALRFYGSIDVTVTGITIQNSPQCHLKFDNCVQVLVHDVN 313
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+++ DSPNT+GIH+ ++ I + +A GDDC+S+ GHGIS+G
Sbjct: 314 VSSPGDSPNTDGIHLQNTKDVMIHTTTLACGDDCISIQTGCSNVYVHNVNCGPGHGISIG 373
Query: 130 SLGKGINDEEVVGLTVRNC----TFTG------------------TNIVTNNVENPIVID 167
SLGK V +TVR+ T TG +NI V+ PIVID
Sbjct: 374 SLGKDSTKACVSNITVRDVVMHNTMTGVRIKTWQGGIGSVKGILFSNIQLTEVQLPIVID 433
Query: 168 QLYCPYNKCNIKVPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
Q YC ++KC + S V V + IRGT ++ PC ++ + I
Sbjct: 434 QFYCDHSKC-MNHTSAVSVEGVTYEKIRGTYTVKPVHFACSDSFPCIDVQLSGIE 487
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
FNV DFGA DG+ DD++AFE AW AC + S +++PP
Sbjct: 121 FNVLDFGAKGDGMSDDTEAFEAAWASACKVEA--STMIIPP 159
>gi|224100173|ref|XP_002311773.1| predicted protein [Populus trichocarpa]
gi|222851593|gb|EEE89140.1| predicted protein [Populus trichocarpa]
Length = 517
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + ++D+++++ +SPNT+GIH
Sbjct: 248 MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCVGVVVHDMRVSSPGNSPNTDGIH 307
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I + +A GDDCVS+ GHGIS+G LGK V +
Sbjct: 308 LQNSKDVLIRSTDLACGDDCVSIQTGCTNVYIHNVNCGPGHGISIGGLGKDNTKACVSNI 367
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ GT NI + V+ PIVIDQ YC KC +
Sbjct: 368 TVRDVVMHGTMTGVRVKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRKCKNQT- 426
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S + + NIRGT ++ +PC ++ + I
Sbjct: 427 SAVALSGITYENIRGTYTVKPVHFACSDALPCMDVSLTTIE 467
>gi|217330700|gb|ACK38189.1| unknown [Medicago truncatula]
Length = 254
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 66/105 (62%), Gaps = 16/105 (15%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+++ FNF+N+S + G+ S DS+ FH+ + GC N+ + ITA DSPNT+GIH+G S
Sbjct: 147 FMNFGFNFVNNSLVHGVTSKDSKNFHVMVFGCNNITFDSFTITAPGDSPNTDGIHMGKST 206
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGK 133
G +I ++ I TGDDCVS+ GHG+S+GSLGK
Sbjct: 207 GVKILNTNIGTGDDCVSIGDGSKQITVEGVKCGPGHGLSIGSLGK 251
>gi|388511385|gb|AFK43754.1| unknown [Medicago truncatula]
Length = 400
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 107/231 (46%), Gaps = 47/231 (20%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F+ + + + ++S HI++ C+ ++ L I A +SPNT+GI I S+
Sbjct: 158 ALHFHACENLILRELTHINSPRNHISLNACHGSHISKLHIIAPNESPNTDGIDIAESSNI 217
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +S I TGDDC+++ GHGISVGSLG+ E V VRNCTF
Sbjct: 218 IIENSKIETGDDCIAINHGSNSIYINGIFCGPGHGISVGSLGRNGVHESVENTYVRNCTF 277
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T +I+ +NP++IDQ Y PY+ VK S+
Sbjct: 278 NRTTNGARIKTWIGGNGYARKVTFEDIILIEADNPVIIDQEYNPYDS-----AYAVKVSD 332
Query: 189 VRFNNIRGTSANKIPCQ---NIGIGNINWVYNGVNVKVE-GPETTSLCSNV 235
V F NIRGTS K Q + I N + G+N+ G E + C NV
Sbjct: 333 VTFRNIRGTSIAKHAIQLHCDEDITCTNIILEGINITSSIGEEVHASCKNV 383
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV D+GAV +G D+++AF AW++ C S +L+P GK ++
Sbjct: 30 FNVLDYGAVGNGKNDETRAFVDAWKDTCIAMHESSTLLIPKGKTFMLQ 77
>gi|357131906|ref|XP_003567574.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 499
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 101/216 (46%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF N+ T+ G+K +S FH C + ++ L I++ A SPNT+GIH+ ++
Sbjct: 235 VALRFFMSNNVTVQGLKVQNSPEFHFRFDSCRGVHVHGLSISSPALSPNTDGIHVENTQD 294
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+++V++ GDDCVS+ GHGIS+GSLGK V +TVRN
Sbjct: 295 VLIANTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGKQGTRACVSNITVRNAV 354
Query: 150 F----------------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T N+ + V NPI+IDQ YC C + V +
Sbjct: 355 IRHSDNGVRIKTWQGGSGSVSGVTFENVRMDAVRNPIIIDQYYCLSKSCE-NATTAVFVN 413
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
V ++ IRGT ++ +PC NI + +
Sbjct: 414 GVTYSGIRGTYDVRGPPIHFGCSDAVPCTNITLSGV 449
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+KDFGA DG+ DD+ A +TAW AC D + V+ G +R
Sbjct: 109 IKDFGAAGDGVTDDTDAIKTAWDTACQ-DAGEGVVVAAAGHSFLVR 153
>gi|258640140|gb|ACV85696.1| ripening-induced polygalacturonase 3 [Carica papaya]
Length = 444
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 111/238 (46%), Gaps = 55/238 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F ++ ++ I +S+ HI+ C +K +L +TA +SPNT+GIH+ +
Sbjct: 198 AVTFYECSNLIVSNIWFQNSQKMHISFQSCLYVKALNLVVTAPENSPNTDGIHVTGTRNI 257
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I GDDC+S+ GHGIS+GSLG ++ V + V N
Sbjct: 258 CLIRTGIELGDDCISIVSGSKNVRATGITCGPGHGISIGSLGADNSEAYVSNVEVTNSKL 317
Query: 151 TGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
TGT NI NV NPI+IDQ YC + + S VK S
Sbjct: 318 TGTTNGVRIKTWQQGGSGFAKNIIFHNIEMKNVTNPIIIDQNYCDQDDPCPQQASAVKVS 377
Query: 188 NVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
NV + NI+GTSA+K +PCQ I + ++ + K E P T + C+NV
Sbjct: 378 NVLYRNIKGTSASKVAINFDCSETVPCQGILLQDV-----AIASKHEEP-TKASCANV 429
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
+ NV +GA A+G +DDS+AF+ AWR AC AVLV P
Sbjct: 75 IVNVDRYGAKANG-RDDSQAFKKAWRAAC--LASNGAVLVVP 113
>gi|78482998|dbj|BAE47457.1| endopolygalacturonase [Capsicum annuum]
Length = 312
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 42/195 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F N + +K +++ H++ C N++ ++L I + +SPNT+GIH+ +++
Sbjct: 121 ALTFYNCNKLKVKNLKIKNAQQIHVSFETCTNVEASNLMINSPENSPNTDGIHVANTHNI 180
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+IS + I TGDDC+S+ GHGIS+GSLG G ++ + V F
Sbjct: 181 QISSATIGTGDDCISITSGSQKVHATDITCGPGHGISIGSLGSGNSEAHASDINVYGAKF 240
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNK-CNIKVPSQVKTS 187
GT +I VENPI+IDQ YC N C Q+K
Sbjct: 241 YGTTNGLRIKTWQGGSGSASNIKFQHIDMEGVENPIIIDQNYCDQNDPCK---DQQLKVK 297
Query: 188 NVRFNNIRGTSANKI 202
NV + NI+GTSA K+
Sbjct: 298 NVVYQNIKGTSATKV 312
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFL 53
FGA DG DD+KAF+ AW++AC+ + + V+ YL +FL
Sbjct: 1 FGAKGDGNTDDTKAFKQAWQDACSSNTPVNFVVQQNKNYLLKNIHFL 47
>gi|115451573|ref|NP_001049387.1| Os03g0216800 [Oryza sativa Japonica Group]
gi|108706858|gb|ABF94653.1| Polygalacturonase precursor, putative, expressed [Oryza sativa
Japonica Group]
gi|113547858|dbj|BAF11301.1| Os03g0216800 [Oryza sativa Japonica Group]
gi|215740623|dbj|BAG97279.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 438
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 99/216 (45%), Gaps = 42/216 (19%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C + V P Y F N + G++ DS H+ I + + ++ L
Sbjct: 175 WINSCKTNRSMRCVTGPTALY----FRRCNHLVVEGLQIRDSMQMHVVIAYSWRVLVSRL 230
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA SPNT+GIH+ +S +S +I+TGDDC+S+ GHGIS+
Sbjct: 231 LITAPGWSPNTDGIHVSNSREVLMSGCIISTGDDCISIVTGSMFIRATGIFCGPGHGISI 290
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + V + V T GT +I +NV NP++I
Sbjct: 291 GSLGANKSWAHVSDVLVEKATLVGTTNGVRIKTWQGGDGHAERITFQDITMHNVTNPVII 350
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI 202
DQ YC + S V +N+R+ NIRGTS++K+
Sbjct: 351 DQNYCDSMTPCHEQGSAVAINNIRYRNIRGTSSSKV 386
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNF 52
V +V D+ A AD D ++AF AW+EACN S +LVP GK YL + +F
Sbjct: 65 VVDVDDYRARADA-GDHTEAFLQAWKEACNSSDYPSVLLVPEGKTYLLMPVSF 116
>gi|357127462|ref|XP_003565399.1| PREDICTED: probable polygalacturonase At3g15720-like [Brachypodium
distachyon]
Length = 567
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 108/247 (43%), Gaps = 53/247 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ F + N+ + I DS H+ + C ++ + +TA A SPNT+GI++ S+
Sbjct: 317 LAFAYCNNLWVRNIHLKDSAEKHMTLYRCSQAHVDSVSVTAPAHSPNTDGINMALSDHVY 376
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV-GLTVRNCTF 150
IS + TGDDCVS+ GHGISVGSLG + +V +TV NC+F
Sbjct: 377 ISSCSMQTGDDCVSILSGTTDAYVTDTTCGPGHGISVGSLGGANSKSALVERITVSNCSF 436
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
GT N+ V PI IDQ YCP C + V ++
Sbjct: 437 VGTLTGVRIKSWQGGTGKANGFLFENLNMTAVRFPIDIDQFYCPPGNCPTR-DGGVAITD 495
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
RF NI GTS+ K +PC+ I + ++ +N N + S N T
Sbjct: 496 ARFINIHGTSSEKQAIQILCSQSVPCRGIYLHDVTLYWNKKN---HVSQAQSRILNAHGT 552
Query: 239 LFGKQIP 245
+ G +P
Sbjct: 553 IVGNVVP 559
>gi|114841685|dbj|BAF32144.1| pollen allergen [Metasequoia glyptostroboides]
Length = 419
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 112/249 (44%), Gaps = 56/249 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+ +F +D TI G+ +S FH C +K+ L I A +SPNT+GI I S
Sbjct: 155 AIKIDFSSDVTIQGLTITNSPKFHFVFGSCEGVKILGLNIKAPGNSPNTDGIDIFGSKNF 214
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I ++ I TGDDC+++ GHGIS+GSLG+G + V + V F
Sbjct: 215 LIQNNTIGTGDDCIAIGTGSSNIQINDLTCGPGHGISIGSLGRGNSRAVVSSVHVNRAKF 274
Query: 151 TGT-----------------NIVTNNVE-----NPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T NI NVE NPI+I+Q YC S V+ +
Sbjct: 275 IDTQNGLRIKTWQGGSGIANNITYENVEMINAGNPILINQFYCTLVSGCKNQASAVQIKD 334
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKV-EGPETTSLCSNVKP 237
V + NI GTSA + +PC++I + + VN+K+ G + L N
Sbjct: 335 VTYKNIHGTSATPAAVNFKCSDSMPCRDIKLSD-------VNLKLTSGKGASCLNQNAHG 387
Query: 238 TLFGKQIPA 246
L G+ IPA
Sbjct: 388 YLTGRVIPA 396
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV+ +GAV DG D ++AF TAW AC SAVLV P
Sbjct: 28 IFNVEKYGAVGDGKHDSTQAFATAWSAACK---KPSAVLVVPA 67
>gi|357129630|ref|XP_003566464.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 596
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 50/217 (23%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF + + G++ +S FH GC ++ ++ L I+A A+SPNT+GIH+ ++
Sbjct: 334 IRFFMSRNLVVEGLRVENSPEFHFRFDGCSDVLVDGLFISAPANSPNTDGIHVENTERVR 393
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I +S I+ GDDC+S+ GHGIS+GSLG + V +TVRN
Sbjct: 394 IYNSKISNGDDCISIGTGSYDLDIQNISCGPGHGISIGSLGVHNSQACVANVTVRNAVIR 453
Query: 152 GTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
++ ++ NV N I+IDQ YC +C + + V+ +NV
Sbjct: 454 NSDNGLRIKTWQGGAGSVSGIAFDGVLMENVRNCIIIDQYYCLDKRC-MNASTAVRVANV 512
Query: 190 RFNNIRGT-----------SANKIPCQNIGIGNINWV 215
++N+RG+ ++ +PC N+ + + +
Sbjct: 513 SYSNVRGSYDVRSAPIHFACSDAVPCTNVTMSEVELL 549
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V+ FGA + DD+ AF AW AC ++S VL+ P
Sbjct: 200 VFDVRAFGAAGESTADDTDAFRAAWSAAC---AVQSGVLLVP 238
>gi|125524377|gb|EAY72491.1| hypothetical protein OsI_00348 [Oryza sativa Indica Group]
Length = 300
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 96/193 (49%), Gaps = 39/193 (20%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
K L++RF N+ T+ G+K +S FH C ++++ L I++ A SPNT+GIH+ +
Sbjct: 104 AKVLAMRFAISNNVTVRGLKVQNSPEFHFRFDNCNGVRVDGLSISSPALSPNTDGIHVEN 163
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
++ I+++V++ GDDCVS+ GHGIS+GSLGK V +TVR
Sbjct: 164 TSDVLITNTVVSNGDDCVSIGAGTLNVHIENVTCGPGHGISIGSLGKAGTKACVANVTVR 223
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
N + N+ + V NPI+IDQ YC C + + V
Sbjct: 224 NAVIRHSDNGVRIKTWQGGSGSVSAVAFENVRMDAVRNPIIIDQYYCLSKSCENET-TAV 282
Query: 185 KTSNVRFNNIRGT 197
+ V ++ IRGT
Sbjct: 283 FVNGVSYSGIRGT 295
>gi|356571056|ref|XP_003553697.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like
[Glycine max]
Length = 503
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 106/223 (47%), Gaps = 50/223 (22%)
Query: 39 LVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGI 98
L P + ++IRF ++ + G+K +S FH C N+ + L I + A SPNT+GI
Sbjct: 230 LGPGDRPVAIRFFESSNLRVEGLKIKNSPKFHFRFDECQNVHVEKLIIKSPALSPNTDGI 289
Query: 99 HIGSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVG 142
HI ++ I +SVI+ GDDCVS+G HGIS+GSLG + V
Sbjct: 290 HIENTTNVNIHNSVISNGDDCVSVGAGCYNVDIRNITCGPSHGISIGSLGNYNSRACVSN 349
Query: 143 LT------------VRNCTFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKV 180
+T VR T+ G NI + V NPI+IDQ YCP C+ +
Sbjct: 350 ITVSDSIIKHSDNGVRIKTWQGGRGAVSKVVFNNIQMDTVRNPIIIDQYYCPSKNCHNQ- 408
Query: 181 PSQVKTSNVRFNNIRGTS-----------ANKIPCQNIGIGNI 212
V SNV ++NI+GT ++ +PC N+ + +
Sbjct: 409 SYAVSVSNVSYSNIKGTYDARSPPMRFACSDSVPCTNLTLSEV 451
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
VFNVK FGAV DG+ DD++AF+ AW AC+ + + VP G I+
Sbjct: 104 VFNVKSFGAVGDGVSDDTEAFKLAWDAACHAEE-SGTLFVPKGHIFMIQ 151
>gi|351724723|ref|NP_001238091.1| polygalacturonase PG1 precursor [Glycine max]
gi|5669846|gb|AAD46483.1| polygalacturonase PG1 [Glycine max]
Length = 443
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S+ H+ C N++++ + +++ DSPNT+GIH
Sbjct: 173 LPSTKPTALRFYGSDGVTVTGITIQNSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIH 232
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDCVS+ GHGIS+GSLG+ V +
Sbjct: 233 LQNSQNVVIYSSTLACGDDCVSIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNV 292
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T N+ + V+ PI IDQ YC +C +
Sbjct: 293 TVRDVTIQNTLTGVRIKTWQGGSGSVQNIMFSNVQVSGVQTPISIDQYYCDGGRCRNE-S 351
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S + + N++GT ++ +PC I + I
Sbjct: 352 SAVAVSGIHYVNVKGTYTKEPIYFACSDNLPCSGITLDTIQ 392
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV D+GA DG DD+KAFE AW AC +G S ++VP G ++
Sbjct: 46 FNVLDYGAKGDGHADDTKAFEDAWAAACKVEG--STMVVPSGSVFLVK 91
>gi|351725093|ref|NP_001238104.1| polygalacturonase PG2 precursor [Glycine max]
gi|5669848|gb|AAD46484.1| polygalacturonase PG2 [Glycine max]
Length = 439
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S+ H+ C N++++ + +++ DSPNT+GIH
Sbjct: 169 LPSTKPTALRFYGSDGVTVTGITIQNSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIH 228
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDC+S+ GHGIS+GSLG+ V +
Sbjct: 229 LQNSQNVVIYSSTLACGDDCISIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNV 288
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T N+ + V+ PI+IDQ YC KC +
Sbjct: 289 TVRDVTIQNTLTGVRIKTWQGGSGSVQNIMFSNVQVSGVQIPILIDQYYCDGGKCRNE-S 347
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V S + + NI+GT ++ +PC I + I
Sbjct: 348 SAVAVSAIHYVNIKGTYTKQPIYFACSDNLPCTGITLDTI 387
Score = 43.1 bits (100), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV D+GA G DD+KAF+ AW AC +G S ++VP G ++
Sbjct: 42 FNVLDYGAKDGGHADDTKAFQNAWVAACKVEG--STMVVPSGSVFLVK 87
>gi|15221078|ref|NP_175244.1| polygalacturonase [Arabidopsis thaliana]
gi|75306312|sp|Q949Z1.1|PGLR4_ARATH RecName: Full=Polygalacturonase At1g48100; Short=PG; AltName:
Full=Pectinase At1g48100; Flags: Precursor
gi|15292729|gb|AAK92733.1| putative polygalacturonase PG1 [Arabidopsis thaliana]
gi|20465275|gb|AAM20001.1| putative polygalacturonase PG1 [Arabidopsis thaliana]
gi|332194127|gb|AEE32248.1| polygalacturonase [Arabidopsis thaliana]
Length = 475
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 39/194 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF N+ + G++ +S FH+ GC + +N+++I++ SPNT+GIH+G++
Sbjct: 213 IRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVG 272
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +SV++ GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 273 IYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIR 332
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N I++DQ YC C + S VK +V
Sbjct: 333 DSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNET-SAVKVFDV 391
Query: 190 RFNNIRGTSANKIP 203
+ NI+GT + P
Sbjct: 392 EYRNIKGTYDVRSP 405
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V FGAV DG DD+ AF+ AW+ AC ++S V++ P
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAAC---AVESGVVLAP 117
>gi|15294256|gb|AAK95305.1|AF410319_1 At1g48100/F21D18_17 [Arabidopsis thaliana]
Length = 475
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 39/194 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF N+ + G++ +S FH+ GC + +N+++I++ SPNT+GIH+G++
Sbjct: 213 IRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVG 272
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +SV++ GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 273 IYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIR 332
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N I++DQ YC C + S VK +V
Sbjct: 333 DSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNET-SAVKVFDV 391
Query: 190 RFNNIRGTSANKIP 203
+ NI+GT + P
Sbjct: 392 EYRNIKGTYDVRSP 405
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V FGAV DG DD+ AF+ AW+ AC ++S V++ P
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAAC---AVESGVVLAP 117
>gi|297812965|ref|XP_002874366.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320203|gb|EFH50625.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 409
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 85/183 (46%), Gaps = 38/183 (20%)
Query: 57 TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG 116
TI GI S+DS HI+I GC ++ + I A SPNT+GI I S +IS S I TG
Sbjct: 169 TINGITSIDSPKTHISIKGCNYATISKINILAPEKSPNTDGIDISYSTNIKISDSTIQTG 228
Query: 117 DDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------- 153
DDC+++ GHGISVGSLG + EV + V +CTF T
Sbjct: 229 DDCIAIDNGSSGINITQINCGPGHGISVGSLGADGTNAEVSDVHVTHCTFNETMNGARIK 288
Query: 154 ---------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS 198
NI N NPI+IDQ Y + S V NV++ RGT+
Sbjct: 289 TWQGGQGYARNISFENITLINTRNPIIIDQQYIDKGHIDATKDSAVAIGNVKYIGFRGTT 348
Query: 199 ANK 201
N+
Sbjct: 349 VNE 351
>gi|297847058|ref|XP_002891410.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337252|gb|EFH67669.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 474
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 39/194 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF N+ + G++ +S FH+ GC + +N+++I++ SPNT+GIH+G++
Sbjct: 212 IRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVG 271
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +SV++ GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 272 IYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIR 331
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N I++DQ YC C + S VK +V
Sbjct: 332 DSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNET-SAVKVFDV 390
Query: 190 RFNNIRGTSANKIP 203
+ NI+GT + P
Sbjct: 391 EYRNIKGTYDVRSP 404
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V FGAV DG +D+ AF+ AW+ AC ++S V++ P
Sbjct: 78 VFDVTSFGAVGDGSCNDTVAFQNAWKAAC---AVESGVVLAP 116
>gi|449474587|ref|XP_004154223.1| PREDICTED: polygalacturonase-like, partial [Cucumis sativus]
Length = 113
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 65/105 (61%), Gaps = 15/105 (14%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIP 203
+I +NV NPI+IDQ YCP+N+CN KV S++K SNV F NIRGTSA IP
Sbjct: 5 DIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKIVCSKSIP 64
Query: 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
C+ + I +I+ Y+G EGP S C+NVKP + GKQ P C
Sbjct: 65 CEGVEIADIDLTYSG----PEGP-IKSQCANVKPVITGKQNPPIC 104
>gi|357512075|ref|XP_003626326.1| hypothetical protein MTR_7g113910 [Medicago truncatula]
gi|355501341|gb|AES82544.1| hypothetical protein MTR_7g113910 [Medicago truncatula]
Length = 430
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 95/196 (48%), Gaps = 30/196 (15%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ F+ + + V+S+ HI C + ++ L ++A + SPNT+GIHI ++ G
Sbjct: 179 SLTFHRCKSLKVRNLTVVNSQKMHIAFTRCMRVVVSRLNVSAPSSSPNTDGIHISATKGI 238
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSL----GKGINDEEVVGLTVR 146
EISHS + TGDDC+S+ GHGIS+G+ G+ + G
Sbjct: 239 EISHSDVKTGDDCISIVRNSSQVWIRNFSCGPGHGISIGTYLTNTKNGLRIKTWQGGHGL 298
Query: 147 NCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----- 201
T +IV NV NPI+IDQ YC S V+ N+ F NI GTSA++
Sbjct: 299 ASNITFQDIVMENVSNPIIIDQYYCDSRLPCKNQTSAVQVVNISFINIIGTSASEETIKF 358
Query: 202 -----IPCQNIGIGNI 212
PC+ + + NI
Sbjct: 359 ACSDTYPCEGLHLENI 374
Score = 44.3 bits (103), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
V ++ DFGA+ DG +DD++AF W+ AC+ G V+ P GK
Sbjct: 56 VLSITDFGAIGDGFQDDTQAFLEVWKIACSLSGFI-VVVFPYGK 98
>gi|449534405|ref|XP_004174153.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 116
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 65/105 (61%), Gaps = 15/105 (14%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIP 203
+I +NV NPI+IDQ YCP+N+CN KV S++K SNV F NIRGTSA IP
Sbjct: 5 DIEMDNVSNPIIIDQEYCPWNQCNRKVASKIKISNVSFKNIRGTSATAIAVKIVCSKSIP 64
Query: 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
C+ + I +I+ Y+G EGP S C+NVKP + GKQ P C
Sbjct: 65 CEGVEIADIDLTYSG----PEGP-IKSQCANVKPVITGKQNPPIC 104
>gi|297739065|emb|CBI28554.3| unnamed protein product [Vitis vinifera]
Length = 1125
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 50/205 (24%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G+ +S+ H I ++++ D++++A DSPNT+GIHI S + + I TGD
Sbjct: 848 VKGLTIQNSQQMHFTISRSQSVRIIDVQVSAPEDSPNTDGIHITDSTNVLLQNCKIGTGD 907
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLGK + V + + + GT
Sbjct: 908 DCISIVSGSSNIKMKTIYCGPGHGISIGSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKT 967
Query: 154 --------------NIVTNNVENPIVIDQLYCPY-NKCNIKVPSQVKTSNVRFNNIRGTS 198
N+ +V NPI+IDQ YC N+C + S V+ S + + NI GT+
Sbjct: 968 WQGGSGFVRAVRYQNVRMEDVANPILIDQFYCDSPNECKNQT-SAVQISQIMYRNISGTT 1026
Query: 199 ----------ANKIPCQNIGIGNIN 213
++ PC NI + NIN
Sbjct: 1027 KSAKAMKFACSDSFPCNNIVVSNIN 1051
Score = 45.4 bits (106), Expect = 0.023, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
NV FGA DG+ DD++AF +AW +AC+ KS +LVP G+
Sbjct: 713 NVDAFGAAGDGVADDTQAFLSAWDKACSTP--KSVLLVPQGR 752
>gi|22329095|ref|NP_194964.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332660650|gb|AEE86050.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 354
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 44 KYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSS 103
+ +++RF + G+ ++S HI IL N L++L + A A SPNT+GI I S
Sbjct: 46 RPVAVRFFGCQNILYNGLTQINSPRNHITILDSNNATLSNLHLIAPASSPNTDGIDISHS 105
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRN 147
I S I TGDDCV++ GHGIS+GSLG+G E V + VR+
Sbjct: 106 QNINIMSSTIKTGDDCVAIKRNSYNINVTYVTCGPGHGISIGSLGEGGASEVVQNVNVRH 165
Query: 148 CTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKV---PS 182
CTFTGT +I N PI+IDQ Y N K +
Sbjct: 166 CTFTGTQNGARIKTWPGGQGFVKNILYEDITLINANFPIIIDQQYRD-NAGQYKQSAGAT 224
Query: 183 QVKTSNVRFNNIRGTSANKIPCQ-----NIGIGNINWVYNGVNVKVEGPET--TSLCSNV 235
VK S+V F + GT A I + N G NI V +N+ P+T TS C
Sbjct: 225 AVKVSDVTFRSFTGTCAAPIAIKLDCDPNTGCDNI--VMEQINIASSSPKTPLTSYCKFA 282
Query: 236 KPTLFGKQIPATC 248
IP TC
Sbjct: 283 HVVSRFVSIPITC 295
>gi|124361046|gb|ABN09018.1| Pectolytic enzyme, Pectin lyase fold [Medicago truncatula]
Length = 267
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 98/196 (50%), Gaps = 38/196 (19%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ F+ + + V+S+ HI C + ++ L ++A + SPNT+GIHI ++ G
Sbjct: 24 SLTFHRCKSLKVRNLTVVNSQKMHIAFTRCMRVVVSRLNVSAPSSSPNTDGIHISATKGI 83
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV----GLTVR 146
EISHS DDC+S+ GHGIS+GSLGK E++ GL
Sbjct: 84 EISHS-----DDCISIVRNSSQVWIRNFSCGPGHGISIGSLGKSKAWEKIENGGHGL-AS 137
Query: 147 NCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----- 201
N TF +IV NV NPI+IDQ YC S V+ N+ F NI GTSA++
Sbjct: 138 NITF--QDIVMENVSNPIIIDQYYCDSRLPCKNQTSAVQVVNISFINIIGTSASEETIKF 195
Query: 202 -----IPCQNIGIGNI 212
PC+ + + NI
Sbjct: 196 ACSDTYPCEGLHLENI 211
>gi|359479951|ref|XP_002270821.2| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
Length = 469
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 101/216 (46%), Gaps = 48/216 (22%)
Query: 44 KYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSS 103
K ++RF + TI I+ +S H+ C +K+ +L I++ DSPNT+GIH+ +S
Sbjct: 200 KPTAVRFYSSLNLTIRDIQIQNSPRCHLKFDNCAGVKVTNLSISSPGDSPNTDGIHLQNS 259
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRN 147
E+ +S I+ GDDC+S+ GHGIS+G LGK V + V+N
Sbjct: 260 QRVEVENSTISCGDDCISIQTGCSDVNIQNIKCGPGHGISIGGLGKDGTLACVSNIVVQN 319
Query: 148 CTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T +I +NV+ PI+IDQ YC C K + V
Sbjct: 320 SIMVDTLYGIRIKTWQGGVGSVKSVIFLDIEVSNVKVPIMIDQFYCEGGTCRNKTDA-VS 378
Query: 186 TSNVRFNNIRGTSANK---------IPCQNIGIGNI 212
+N+ +N I GT A + IPC NI +GN+
Sbjct: 379 LTNITYNQINGTYATQAIHLACSDSIPCTNISMGNV 414
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+F+V FGA DG+ DDSKAF+ W AC +K+A + P K+
Sbjct: 69 IFDVPSFGARGDGVSDDSKAFQVTWSAAC---AVKNATIKIPSKF 110
>gi|255648183|gb|ACU24545.1| unknown [Glycine max]
Length = 443
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S+ H+ C N++++ + +++ DSPNT+GIH
Sbjct: 173 LPSTKPTALRFYGSDGVTVTGITIQNSQQTHLKFDSCTNVQVSGISVSSPGDSPNTDGIH 232
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S + S +A GDDCVS+ GHGIS+GSLG+ V +
Sbjct: 233 LQNSQNVVVYSSTLACGDDCVSIQTGCSDIYVHNVNCGPGHGISIGSLGRENTKACVRNV 292
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T N+ + V+ PI IDQ YC +C +
Sbjct: 293 TVRDVTIQNTLTGVRIKTWQGGSGSVQNIMFSNVQVSGVQTPISIDQYYCDGGRCRNE-S 351
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S + + N++GT ++ +PC I + I
Sbjct: 352 SAVAVSGIHYVNVKGTYTKEPIYFACSDNLPCSGITLDTIQ 392
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV D+GA DG DD+KAFE AW AC +G S ++VP G ++
Sbjct: 46 FNVLDYGAKGDGHADDTKAFEDAWAAACKVEG--STMVVPSGSVFLVK 91
>gi|297743417|emb|CBI36284.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 119/273 (43%), Gaps = 60/273 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W ++C + P +I F+ + I ++S+ HI + + ++ +
Sbjct: 159 WSQSCKINATNPCEHAP----TAIIFHRCKKLRVRDIALINSQRTHIAFTNSFRIVVSGI 214
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
K+ A A SPNT+G+HI SS+ I S+I TGDDC+S+ GHGISV
Sbjct: 215 KMIAPASSPNTDGLHISSSSRVNIKDSIIRTGDDCISIVGNSSIIRIKNIACGPGHGISV 274
Query: 129 GSLGKG---------INDEEVVGLT---VRNCTFTG----------TNIVTNNVENPIVI 166
GSLG G I D+ + T +R T+ G N++ NV +PI+I
Sbjct: 275 GSLGMGNSWAQVHDVIVDQAFLAHTKNGLRIKTWQGGRGFASQITFQNVLMENVSHPIII 334
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWV- 215
DQ YC + VK +N+ + +I+GTSA + PC+ + + + +
Sbjct: 335 DQYYCDSLTPCLNQTLAVKVANISYVSIKGTSATEESVRFACSDSFPCEKLYLEEVQLLS 394
Query: 216 YNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
Y G N T+S C + G P C
Sbjct: 395 YTGKN-------TSSFCWEAQGLTSGSVDPPAC 420
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+ V FGA DG++DD+ AF AW+ AC K+++++P K +R
Sbjct: 50 ILYVNQFGAKGDGVQDDTDAFRNAWKIACA-SITKASIVIPHDKKFLVR 97
>gi|15223598|ref|NP_176064.1| pectin lyase-like protein [Arabidopsis thaliana]
gi|9954742|gb|AAG09093.1|AC009323_4 Putative polygalacturonase [Arabidopsis thaliana]
gi|332195306|gb|AEE33427.1| pectin lyase-like protein [Arabidopsis thaliana]
Length = 434
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 105/217 (48%), Gaps = 50/217 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IR + I GI ++S FH+ C ++ ++ + I A A SPNT+GIHI +++
Sbjct: 181 VAIRLFQSSKVRIQGINFMNSAQFHVRFDNCSDVVVDSVIIKAPASSPNTDGIHIENTHN 240
Query: 106 SEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT 149
+I +S+I+ GDDC+S+G HGIS+GSLG + V +TV N T
Sbjct: 241 VQIRNSMISNGDDCISIGAGCFNVDIKNVTCGPSHGISIGSLGVHNSQAYVSNITVTNST 300
Query: 150 ----------------------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
+NI+ NV NPI+IDQ YC N C + S V S
Sbjct: 301 IWNSDNGVRIKTWQGGSGSVSRIVFSNILMVNVRNPIMIDQYYCQTNNCANQT-SAVIIS 359
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNIN 213
+V + NI+GT ++ +PC N+ + ++
Sbjct: 360 DVLYANIKGTYDLRSPPIHFGCSDSVPCTNLTLTEVD 396
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V FGA+ D DD+ AF+ AW AC G KSA+L+ P +
Sbjct: 47 VFDVTSFGAIGDCSTDDTSAFKMAWDAACMSTGPKSALLLVPYTF 91
>gi|357462815|ref|XP_003601689.1| hypothetical protein MTR_3g084360 [Medicago truncatula]
gi|355490737|gb|AES71940.1| hypothetical protein MTR_3g084360 [Medicago truncatula]
Length = 400
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 109/237 (45%), Gaps = 45/237 (18%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G+ +++F ++ + ++ +DS HI+I+ C ++ L I A +SPNT+GI I
Sbjct: 152 GRPTALQFLGCDNLKLGPLRHIDSPKNHISIVDCNGALISHLHIIAPENSPNTDGIDISR 211
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S I HS I+TGDDC+++ GHGISVGSLGK V + V
Sbjct: 212 STNIIIEHSTISTGDDCIAINSGSKFINITAINCGPGHGISVGSLGKDGKYATVEEVHVS 271
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
+ FTGT +I V NPI+IDQ Y + V V
Sbjct: 272 HSIFTGTENGARIKTWTAGTGYARKITYEDITLIKVNNPIIIDQHYDALESVSDSVRKGV 331
Query: 185 KTSNVRFNNIRGTSANK----IPCQNIGIGNINWVYNGVNVKVEGPETTSL-CSNVK 236
K S+V F RGT+ K + C IG NI V +N+ G E S C+NV+
Sbjct: 332 KVSDVTFRGFRGTANEKDAIELNCARIGCTNI--VLENINIAGLGGEKPSASCNNVQ 386
>gi|297853574|ref|XP_002894668.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297340510|gb|EFH70927.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 100/205 (48%), Gaps = 50/205 (24%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I G+ ++S FH+ C ++ ++ + I A A SPNT+GIHI +++ +I +SVI+ GD
Sbjct: 193 IQGLNFMNSAQFHVRFDNCSDVVVDSVTIKAPASSPNTDGIHIENTHNVQIHNSVISNGD 252
Query: 118 DCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCT------------ 149
DC+S+G HGIS+GSLG + V +TV N T
Sbjct: 253 DCISIGGGCFNVDIQNVTCGPSHGISIGSLGLHNSQAYVSNITVTNSTIWNSDNGVRIKT 312
Query: 150 ----------FTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT-- 197
+NI+ NV NPI+IDQ YC N C + S V +V + NI+GT
Sbjct: 313 WQGGSGSVSRIVFSNILMVNVRNPIMIDQYYCQTNNCANQT-SAVIIRDVLYANIKGTYD 371
Query: 198 ---------SANKIPCQNIGIGNIN 213
++ +PC N+ + +++
Sbjct: 372 LRSPPMHFGCSDSVPCTNLRLADVD 396
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V FGA+ D DD+ AF+ AW AC G KSA+L+ P +
Sbjct: 47 VFDVTSFGAIGDCATDDTSAFKMAWDVACMSTGSKSALLLVPYTF 91
>gi|255542994|ref|XP_002512560.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223548521|gb|EEF50012.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 470
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 104/216 (48%), Gaps = 50/216 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF ++ T+ G+K +S FH C N+ + L I A A SPNT+GIHI ++N
Sbjct: 207 VALRFFMSSNLTVQGLKVKNSPQFHFRFDNCQNVHIEMLNIKAPALSPNTDGIHIENTND 266
Query: 106 SEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLT----- 144
I +SV++ GDDCVS+G HGIS+GSLG + V +T
Sbjct: 267 VHIHNSVVSNGDDCVSIGAGCHNVDIRNITCGPSHGISIGSLGIHNSRACVSNITVTDSV 326
Query: 145 -------VRNCTFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
VR T+ G NI + V NPI+IDQ YC C+ + S V S
Sbjct: 327 IKYSDNGVRIKTWQGGYGSVSKVAFHNIHMDTVRNPIIIDQYYCLTKNCSNQT-SAVYIS 385
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNI 212
++ + +I+GT ++ +PC N+ + I
Sbjct: 386 DISYTDIKGTYDVRSPPLHLACSDSVPCSNLILSEI 421
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 7/58 (12%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
VFNV FGAV DG DD++AF+ AW AC+ + +S++L+ P +Y +FL TI
Sbjct: 74 VFNVLSFGAVGDGASDDTQAFKMAWDSACSQN--ESSILLAPSRY-----SFLIQPTI 124
>gi|115471125|ref|NP_001059161.1| Os07g0208100 [Oryza sativa Japonica Group]
gi|113610697|dbj|BAF21075.1| Os07g0208100 [Oryza sativa Japonica Group]
Length = 224
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/186 (34%), Positives = 88/186 (47%), Gaps = 48/186 (25%)
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
++ L ITA +PNT+GIHI S +++ I TGDDC+S+ GH
Sbjct: 1 MSRLSITAPETAPNTDGIHITRSRDVQVTDCTIKTGDDCMSIEDGTKNLHVKNMVCGPGH 60
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVEN 162
GIS+GSLG ++ V +TV N GT N+V +NV N
Sbjct: 61 GISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGKGSAKNIVFQNMVMDNVWN 120
Query: 163 PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNI 212
PI+IDQ YC + + S V+ SN+ F NIRGTSA N +PC I + N+
Sbjct: 121 PIIIDQNYCDSSTPCKQQKSAVEVSNLLFKNIRGTSASEEAIVLHCSNSVPCHGITLENV 180
Query: 213 NWVYNG 218
N G
Sbjct: 181 NLTVKG 186
>gi|326514360|dbj|BAJ96167.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 532
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 96/196 (48%), Gaps = 39/196 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + +TGI V+S H+ C + +++L I++ SPNT+GIH
Sbjct: 261 MPQIKPTALRFYGSTNVRVTGISIVNSPQCHLKFDSCQGVMVHNLTISSPETSPNTDGIH 320
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDC+S+ GHGIS+G LG+ V +
Sbjct: 321 LQNSKDVNIHHTDLACGDDCISIQTGCSDVNIHNVNCGPGHGISIGGLGRYNTKACVSNI 380
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PI+IDQ YC C +
Sbjct: 381 TVRDVNMFKTMTGVRIKTWQGGSGLVQGIRFSNIHMSEVQTPIMIDQFYCDKTACTNQT- 439
Query: 182 SQVKTSNVRFNNIRGT 197
S V S+V++ NIRGT
Sbjct: 440 SAVAVSDVQYENIRGT 455
>gi|359482331|ref|XP_002281827.2| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
vinifera]
Length = 452
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 119/273 (43%), Gaps = 60/273 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W ++C + P +I F+ + I ++S+ HI + + ++ +
Sbjct: 170 WSQSCKINATNPCEHAP----TAIIFHRCKKLRVRDIALINSQRTHIAFTNSFRIVVSGI 225
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
K+ A A SPNT+G+HI SS+ I S+I TGDDC+S+ GHGISV
Sbjct: 226 KMIAPASSPNTDGLHISSSSRVNIKDSIIRTGDDCISIVGNSSIIRIKNIACGPGHGISV 285
Query: 129 GSLGKG---------INDEEVVGLT---VRNCTFTG----------TNIVTNNVENPIVI 166
GSLG G I D+ + T +R T+ G N++ NV +PI+I
Sbjct: 286 GSLGMGNSWAQVHDVIVDQAFLAHTKNGLRIKTWQGGRGFASQITFQNVLMENVSHPIII 345
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWV- 215
DQ YC + VK +N+ + +I+GTSA + PC+ + + + +
Sbjct: 346 DQYYCDSLTPCLNQTLAVKVANISYVSIKGTSATEESVRFACSDSFPCEKLYLEEVQLLS 405
Query: 216 YNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
Y G N T+S C + G P C
Sbjct: 406 YTGKN-------TSSFCWEAQGLTSGSVDPPAC 431
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+ V FGA DG++DD+ AF AW+ AC K+++++P K +R
Sbjct: 61 ILYVNQFGAKGDGVQDDTDAFRNAWKIACA-SITKASIVIPHDKKFLVR 108
>gi|226490390|dbj|BAH56488.1| polygalacturonase 1 [Prunus persica]
Length = 510
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + ++TGI +S H+ C N++++D+ I++ DSPNT+GIH
Sbjct: 238 MPSTKPTALRFYGSDGVSVTGITLQNSPQTHLKFDACTNVQVSDISISSPGDSPNTDGIH 297
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I + IA GDDC+S+ GHG+S+ LGK V +
Sbjct: 298 LQNSQDVVIFGTSIACGDDCISIQTGCSNIYVHNVNCGPGHGVSIVGLGKDNTRACVSNV 357
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V PI+IDQ YC +KC +
Sbjct: 358 TVRDVKMHNTLTGVRIKTWQGGSGSVQNIMFSNIQVSEVATPIMIDQFYCDKSKCQNET- 416
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNIN 213
S V S V + NI+GT K +PC + + I
Sbjct: 417 SAVAVSGVNYVNIQGTYTTKPVHFACSDSLPCTGVSLDTIQ 457
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
VFNV D+GA DG DD+KAFETAW AC S + VP G ++
Sbjct: 100 VFNVLDYGAKGDGKADDTKAFETAWAAACKVPA--STINVPSGSVFLVK 146
>gi|242076792|ref|XP_002448332.1| hypothetical protein SORBIDRAFT_06g025345 [Sorghum bicolor]
gi|241939515|gb|EES12660.1| hypothetical protein SORBIDRAFT_06g025345 [Sorghum bicolor]
Length = 400
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 127/286 (44%), Gaps = 64/286 (22%)
Query: 12 DGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHI 71
+G+ D S ++ W C+ D A L + +++ N+ ++ S +S HI
Sbjct: 127 NGVLDGSG--QSWWVRRCHSD----ANLFVSVAWQALKLVSCNNLELSQFSSRNSPQMHI 180
Query: 72 NILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--------- 122
I+ + + L I A +SPNT+G+H+ S+G +I++S I TGDDCVS+
Sbjct: 181 AIVESSGVNVWGLNIAAPGNSPNTDGVHVERSHGVQITNSTIGTGDDCVSISSGSRFVTV 240
Query: 123 -------GHGISVGSLGKGINDEEVVGLTVRNCTFTG----------------------T 153
GHG+S+GSLGK V + V+N FT T
Sbjct: 241 DGIQCGPGHGVSIGSLGKNGEIAAVEYIDVKNVYFTNTMNGARIKTWEGAQGYARSISFT 300
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA-------------- 199
+I +NV++PI+IDQ Y + + V SNV + N++GTSA
Sbjct: 301 DIEFDNVDHPIIIDQFYRDHTAEVRSLQLAVAISNVTYTNLKGTSALPTAVAFDCGAGAG 360
Query: 200 NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
C +I + ++ +G G +T + C N K ++ G+ P
Sbjct: 361 AGGSCTDIHVNSVMITRSG------GQQTVARCRNAKVSISGQVYP 400
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
NV GA DG DD+KAFE AW AC G SAV+V P +
Sbjct: 27 NVVAHGARGDGSTDDTKAFEAAWNAACGAKG-PSAVMVVPAQ 67
>gi|356502035|ref|XP_003519827.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 462
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 49/222 (22%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K +IRF N T+ I+ ++S H+ +K+N++ I++ +SPNT+GIH
Sbjct: 188 IPSIKPTAIRFYSSNFVTVRDIRIINSPLCHLKFDNSKGIKVNNITISSPENSPNTDGIH 247
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG------IND 137
+ ++ EI S+I+TGDDCVS+ GHGIS+G LGK ++D
Sbjct: 248 LQNTQDVEIQRSIISTGDDCVSIQTGCSNVHVHHINCGPGHGISLGGLGKDKTSAACVSD 307
Query: 138 EEVVGLTVRNCTF-----------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKV 180
V ++++N F T + I +V PI+IDQ YC C
Sbjct: 308 ITVEDISMKNTLFGARIKTWQGGIGMVKNVTFSRIQVYDVMYPIMIDQYYCDKEICKNHT 367
Query: 181 PSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S V+F+ I GT +N IPC ++ + +I
Sbjct: 368 -STVVISGVKFDQIHGTYGMQPVHLACSNSIPCTDVDLSDIQ 408
>gi|73912507|dbj|BAB20805.2| polygalacturonase [Zinnia elegans]
Length = 443
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 48/217 (22%)
Query: 44 KYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSS 103
K ++RF D T+TGI +S+ H+ C ++++ + +++ DSPNT+GI++ +S
Sbjct: 176 KPTAVRFYGSTDVTVTGITIQNSQQTHLKFDNCQSVQVFGVTVSSPGDSPNTDGIYLQNS 235
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRN 147
I + +A GDDC+S+ GHGIS+GSLGK V +TVR+
Sbjct: 236 QDVTIHSTKLACGDDCISIQTGCSGVNIQNVDCGPGHGISIGSLGKDNTRACVSNITVRD 295
Query: 148 C----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
T TG +NI + VE I+IDQ YC KC K S V
Sbjct: 296 TKIHDTMTGVRIKTWQGGSGAVQGVTFSNIQVSKVETAIIIDQFYCDGGKCQNKT-SAVG 354
Query: 186 TSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S + + NIRGT + PC ++ + I
Sbjct: 355 VSEISYQNIRGTYTQNPVRFACSQSTPCTDVNLDTIQ 391
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+FNV +FGA DG DD+KAFE AW AC + S ++VP G I+
Sbjct: 62 IFNVLNFGAKGDGTTDDTKAFEAAWLAACKLEA--STMVVPKGSVFLIK 108
>gi|224124378|ref|XP_002330008.1| predicted protein [Populus trichocarpa]
gi|222871433|gb|EEF08564.1| predicted protein [Populus trichocarpa]
Length = 408
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 107/242 (44%), Gaps = 52/242 (21%)
Query: 22 ETAWREACN-WDGIKSAVLVPP-GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 79
E W C GI L P ++IRF ++ T+ G++ +S FH C N+
Sbjct: 128 EKWWNLPCKPHKGINGTTLPGPCDSPVAIRFFTSSNLTVQGLRVKNSPQFHFRFDNCQNV 187
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG---------------- 123
+ L I + A SPNT+GIHI ++ +I +SV++ GDDCVS+G
Sbjct: 188 IVQMLSIKSPAQSPNTDGIHIENTYNVQIHYSVVSNGDDCVSIGAGCHNVDIKNITCGPS 247
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCT----------------------FTGTNIVTNNVE 161
HGIS+GSLG + V +TV + T NI V
Sbjct: 248 HGISIGSLGIRNSRACVSNITVTDSVIKNSDNGVRIKTWQGGYGSVSKITFHNIHMETVR 307
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT-----------SANKIPCQNIGIG 210
NPI+IDQ YC C + S V S++ + NI+GT ++ +PC N+ +
Sbjct: 308 NPIIIDQYYCQTRNCTNQT-SAVYISDILYTNIKGTYDIRSPPLHLACSDSVPCTNLRLS 366
Query: 211 NI 212
I
Sbjct: 367 EI 368
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
V+NV FGAV DG+ DD++AF+ AW AC + +SA+L+ P Y
Sbjct: 21 VYNVLSFGAVGDGVTDDTQAFKMAWDTACLQN--ESAILLAPDDY 63
>gi|255553121|ref|XP_002517603.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223543235|gb|EEF44767.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 424
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F+ D I ++ V + H++ C + L +T+ A SPNT+GIHI +S
Sbjct: 161 AMTFHKCKDLKIMNLRVVYGQQMHLSFTNCIRVTAFHLVVTSPAFSPNTDGIHISASRHV 220
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
EI S++ TGDDC+S+ GHGIS+GSLGK + +V + +
Sbjct: 221 EIRDSIVRTGDDCISIVGNSSRIKIRKIACGPGHGISIGSLGKYDSSSKVHDILIDGAFL 280
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
+ T N+ NV NPI+IDQ YC S VK +N
Sbjct: 281 SNTDNGLRIKTWQGGSGNATEIKFQNVFMKNVSNPIIIDQYYCDSQIPCANQSSAVKVAN 340
Query: 189 VRFNNIRGTSANK 201
+ F +I+GTSA +
Sbjct: 341 ISFIHIKGTSATE 353
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
VF V DFGA+ DG +D++AF+ AW AC++ ++ +++P G L +
Sbjct: 34 VFFVSDFGAIGDGAANDTQAFKEAWEMACSFPS-RTRIVIPAGYTLLVH 81
>gi|359487384|ref|XP_003633583.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 427
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 98/215 (45%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F ++ + G+K +++ H++I N++ + T+ SPNT GIH SS
Sbjct: 169 AVSFIQCDNLKVNGLKVQNAQEMHVSIEQSVNVEAFKIVTTSPQTSPNTXGIHATSSENV 228
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+I SVI TGDDC+S+ GHGISVG LG G ++ +V + V
Sbjct: 229 QIIESVITTGDDCISIVNGSKNVEAIDVTCGPGHGISVGILGGGNSEAQVSNVLVDXAKL 288
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
GT NI NV+NPI+IDQ YC + S V+ N
Sbjct: 289 IGTTIGVRIKTWIRGSRNVDNIVFQNIKMENVKNPIIIDQNYCDQETPXKEQNSAVQIRN 348
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNIN 213
+ + NI G SA K +PCQ I + +IN
Sbjct: 349 IVYRNITGMSATKMTTIFKCSKTLPCQGIMLKDIN 383
>gi|47606004|sp|Q7M1E7.1|PGLR2_CHAOB RecName: Full=Polygalacturonase; Short=PG; AltName: Full=Major
pollen allergen Cha o 2; AltName: Full=Pectinase;
AltName: Allergen=Cha o 2; Flags: Precursor
Length = 514
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 95/215 (44%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+ ++ T+ + ++S FH+ C +K+ LKI A DSPNT+GI I +S
Sbjct: 185 AIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I VI TGDDC+++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+
Sbjct: 305 IDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQG 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NI GTSA + +PC I + N++
Sbjct: 365 VTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVS 399
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
VFNV+ +GAV DG D ++AF T W AC SAVL+ P
Sbjct: 58 VFNVEQYGAVGDGKHDSTEAFATTWNAACK---KASAVLLVPA 97
>gi|302766173|ref|XP_002966507.1| hypothetical protein SELMODRAFT_85947 [Selaginella moellendorffii]
gi|300165927|gb|EFJ32534.1| hypothetical protein SELMODRAFT_85947 [Selaginella moellendorffii]
Length = 418
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 136/374 (36%), Gaps = 132/374 (35%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWD-------------------------GIK- 35
+NV D+GA++DG+ DDS+AF AW AC + G+K
Sbjct: 35 YNVLDYGALSDGVSDDSEAFLAAWSAACESNYSVMVIPENGTYLLQPTVFPGPCGLGMKV 94
Query: 36 --SAVLVPPG--------KYLSIRFNFLNDSTITGIKSVD-------------------- 65
VLV PG + +RF L+ T+ G ++D
Sbjct: 95 QLDGVLVAPGFFDWNSTNRRQWLRFQHLDGFTLEGTGTIDGQGESWWEQSCKRNHSNPCH 154
Query: 66 -----------------------SRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
S+ H+ N++ L I+A SPNT+GIH+
Sbjct: 155 PAPEALTIKSCNSTTVRNLHFVNSQQMHLVFDTGVNIRAIGLNISAPQKSPNTDGIHLHD 214
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
I VIATGDDC+S+ GHGIS+GSLGK + V + V
Sbjct: 215 VQSGFIQDCVIATGDDCISIQTGSSRIHIKNVYCGPGHGISIGSLGKDGSAGNVRAVVVD 274
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
GT N+ V NPI+IDQ YC + + S V
Sbjct: 275 GAVLNGTTNGLRIKSWQGGRGKVYGVLYQNVRMIGVANPIIIDQYYCDSSVPCLNQTSGV 334
Query: 185 KTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+ S + + NI GTS ++ + C I + ++N + +S C N
Sbjct: 335 EVSGIVYRNITGTSSTAVAVRFACSDSVSCHGIVLMDVN-----LTSVKAKSSVSSFCEN 389
Query: 235 VKPTLFGKQIPATC 248
+ G+ P C
Sbjct: 390 AQGIAVGENSPQGC 403
>gi|114841683|dbj|BAF32143.1| pollen allergen [Chamaecyparis obtusa]
Length = 419
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 95/215 (44%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+ ++ T+ + ++S FH+ C +K+ LKI A DSPNT+GI I +S
Sbjct: 155 AIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRF 214
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I VI TGDDC+++ GHGIS+GSLG+ + EV + V F
Sbjct: 215 HIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKF 274
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+
Sbjct: 275 IDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQG 334
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NI GTSA + +PC I + N++
Sbjct: 335 VTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVS 369
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
VFNV+ +GAV DG D ++AFETAW AC SAVLV P
Sbjct: 28 VFNVEQYGAVGDGKHDSTEAFETAWNAACK---KASAVLVVPA 67
>gi|255568780|ref|XP_002525361.1| polygalacturonase, putative [Ricinus communis]
gi|223535324|gb|EEF36999.1| polygalacturonase, putative [Ricinus communis]
Length = 519
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 105/220 (47%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF ++T+TGI +S H+ C + ++D+ I++ DSPNT+GIH
Sbjct: 250 MPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCIGVVIHDITISSPGDSPNTDGIH 309
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDCVS+ GHGIS+GSLG+ V +
Sbjct: 310 LQNSKDVLIHSSNLACGDDCVSIQTGCTNVYIHNVNCGPGHGISIGSLGRDNTKACVSNI 369
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PIVIDQ YC + C +
Sbjct: 370 TVRDVVMHNTMTGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSTCKNQT- 428
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
+ V S + + IRGT ++ +PC ++ + I
Sbjct: 429 TAVSLSGINYEKIRGTYTVKPVHFACSDALPCIDVSLTTI 468
>gi|357448715|ref|XP_003594633.1| Polygalacturonase [Medicago truncatula]
gi|355483681|gb|AES64884.1| Polygalacturonase [Medicago truncatula]
Length = 463
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 100/219 (45%), Gaps = 47/219 (21%)
Query: 31 WDGIKSAVLVPPGKYLS--------IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
WD P GK +S IRF ++ + G+K +S FH+ GC + ++
Sbjct: 175 WDLPCKPHRSPDGKTVSGPCVSPTMIRFFMSSNLVLRGLKIQNSPQFHVKFDGCQGVLID 234
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG----------------HGI 126
+L I+A SPNT+GIH+G++ I +S+I+ GDDC+S+G HGI
Sbjct: 235 ELSISAPKLSPNTDGIHLGNTRDVGIYNSLISNGDDCISIGPGCSNVNVDGVTCAPTHGI 294
Query: 127 SVGSLGKGINDEEVVGLTVRNCT----------------------FTGTNIVTNNVENPI 164
S+GSLG + V LTVRN T NI NV N I
Sbjct: 295 SIGSLGVHNSHACVSNLTVRNSIIKESDNGLRIKTWQGGTGSVTGLTFDNIQMENVRNCI 354
Query: 165 VIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIP 203
IDQ YC +C + S V +N+ + I+GT + P
Sbjct: 355 NIDQFYCLSKEC-MNQTSAVYVNNISYRKIKGTYDVRTP 392
>gi|224122852|ref|XP_002318932.1| predicted protein [Populus trichocarpa]
gi|222857308|gb|EEE94855.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 52/242 (21%)
Query: 22 ETAWREACN-WDGIKSAVLVPP-GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNL 79
E W C G A L P +++RF ++ + G++ +S FH C ++
Sbjct: 183 EKWWNLPCKPHKGPNGATLPGPCDSPVAMRFFMSSNLIVQGLEVKNSPQFHFRFDNCQDV 242
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG---------------- 123
+ L I + SPNT+GIHI ++N +I +SVI+ GDDCVS+G
Sbjct: 243 TVQMLSIKSPPLSPNTDGIHIENTNNVQIYNSVISNGDDCVSIGAGCHNVDIKNITCGPS 302
Query: 124 HGISVGSLGKGINDEEVVGLTVRNC------------TFTG----------TNIVTNNVE 161
HGIS+GSLG G + V +TVR+ T+ G NI V
Sbjct: 303 HGISIGSLGIGNSRACVSNITVRDSVIKHSDNGVRIKTWQGGYGSVSKISFHNINMETVR 362
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT-----------SANKIPCQNIGIG 210
NPI+IDQ YC C + S V S++ + +I+GT ++ +PC N+ +
Sbjct: 363 NPIIIDQYYCQTKNCTNQT-SAVHISDILYTSIKGTYDVRSPPLHLACSDSVPCTNLELA 421
Query: 211 NI 212
I
Sbjct: 422 EI 423
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
V+NV FGAV DG DD++AF+ AW AC + + A+L+ P Y
Sbjct: 76 VYNVLSFGAVGDGDTDDTQAFKMAWDTACFQN--EPAILLAPDDY 118
>gi|359496583|ref|XP_003635269.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
Length = 313
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 124/293 (42%), Gaps = 54/293 (18%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
+NV + GA DG D +KAF AW AC + + VPPG+YL + F
Sbjct: 30 YNVVNLGAKGDGHTDSTKAFLNAWAAACG-SASPATIYVPPGRYLLLNAVFRGCKNHAIT 88
Query: 62 KSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG--SEISHSVIATGDDC 119
+D+ + N L G+ G G + G
Sbjct: 89 FRIDATLVAPSDYRVIGNAANWLAFQDVTGVSIIGGVLDGQGTGLWAXXXXXXXXVGPGA 148
Query: 120 VSL---------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------- 153
+L GHGIS+GSLGK + +E V +TV+ TFTG+
Sbjct: 149 TNLWIENVACGPGHGISIGSLGKDLKEEGVQNVTVKTVTFTGSQNGVRIKSWARASNGFV 208
Query: 154 ------NIVTNNVENPIVIDQLYCPYNK-CNIKVPSQVKTSNVRFNNIRGTSANKI---- 202
+I+ NV+NPIVIDQ YCP +K C +V S VK S+V + +I GTSA+++
Sbjct: 209 KRVVFQHILMVNVQNPIVIDQNYCPGHKNCPGQV-SGVKVSDVTYQDIHGTSASEVAMKF 267
Query: 203 ------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
PC I + ++ Y + + PE++ C N G PA+C+
Sbjct: 268 DCSSKNPCSGIKLEDVKLTY-----RNKAPESS--CVNAGGMASGFVEPASCL 313
>gi|255548942|ref|XP_002515527.1| polygalacturonase, putative [Ricinus communis]
gi|223545471|gb|EEF46976.1| polygalacturonase, putative [Ricinus communis]
Length = 363
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 113/255 (44%), Gaps = 59/255 (23%)
Query: 25 WREACN------WDGIKSAVLVPPGKY---------LSIRFNFLNDSTITGIKSVDSRYF 69
WR C + GI ++ PG L+++F+ N ++G+ ++S
Sbjct: 105 WRPRCKSSVWLLFRGISGLIVNGPGAIDGRGSNWWKLALQFHNCNHVKLSGLTHMNSPKV 164
Query: 70 HINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHGISVG 129
HI + GC + +++L I+A DSPNT+GI I S IS+S I T C
Sbjct: 165 HIGVNGCKGVSISNLNISAPEDSPNTDGIGISGSTDVHISNSTIGTDKGC---------- 214
Query: 130 SLGKGINDEEVVGLTVRNCTFTGTN----------------------IVTNNVENPIVID 167
+++V + V+NCTF GT IV + +NPI+ID
Sbjct: 215 -------NDKVEDVHVQNCTFIGTQNGVRIKTWPGGSGYAKNISFERIVLHQTKNPIIID 267
Query: 168 QLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----IPCQNIGIGNINWVYNGVNVKV 223
Q YC +KC K + V+ S ++++ + GTSA+K C IG NI +
Sbjct: 268 QHYCNGHKCTEKAVA-VELSGIKYSGVEGTSASKQAITFDCAKIGCRNIAMDQINITSSS 326
Query: 224 EGPETTSLCSNVKPT 238
G + + C+N K T
Sbjct: 327 PGKQIHAFCNNAKGT 341
>gi|356565972|ref|XP_003551209.1| PREDICTED: probable polygalacturonase At1g80170-like [Glycine max]
Length = 460
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 95/204 (46%), Gaps = 48/204 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G+ +S+ H I C ++++ +K++A DSPNT+GIHI S I S I TGD
Sbjct: 203 VKGLTIQNSQQMHFTISRCDSVRITSVKVSAPGDSPNTDGIHISESTNVIIQDSKIGTGD 262
Query: 118 DCVSL----------------GHGISVGSLGKG---------INDEEVVGLT---VRNCT 149
DC+S+ GHGIS+GSLGK I D V+ T VR T
Sbjct: 263 DCISIVNASSNIKMKRIYCGPGHGISIGSLGKDNSTGIVTKVILDTAVLRETTNGVRIKT 322
Query: 150 FTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS- 198
+ G N+ NV NPI+IDQ YC + V+ S V + NI GT+
Sbjct: 323 WQGGSGYVRGVRFQNVRVENVSNPIIIDQFYCDSPTSCENQTTAVEISEVMYQNISGTTM 382
Query: 199 ---------ANKIPCQNIGIGNIN 213
++ +PC + + N++
Sbjct: 383 SAKAIKFDCSDSVPCNKLVLSNVD 406
Score = 40.0 bits (92), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYL--SIRF 50
+ N+ FGA DG DD++A + AW AC+ KS +L+P G +YL + RF
Sbjct: 66 LVNIDSFGAAGDGESDDTEALQKAWGVACS--TPKSVLLIPQGRRYLVNATRF 116
>gi|356497743|ref|XP_003517718.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 461
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K +IRF N T+ I+ ++S H+ +K+N++ I++ +SPNT+GIH
Sbjct: 188 IPGMKPTAIRFYSSNFVTVRDIRIINSPLCHLKFDNSKGIKVNNITISSPENSPNTDGIH 247
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG-----INDE 138
+ ++ EI S+I+TGDDCVS+ GHGIS+G LGK ++D
Sbjct: 248 LQNTQDVEIQRSIISTGDDCVSIQTGCSNIHVHHINCGPGHGISLGGLGKDKSAACVSDI 307
Query: 139 EVVGLTVRNCTF-----------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
V ++++N + T + I +V PI+IDQ YC C
Sbjct: 308 TVEDISMKNTLYGARIKTWQGGIGMVKNVTFSRIQVYDVMYPIMIDQYYCDKQICKNHT- 366
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S V+F+ I GT +N IPC ++ + +I
Sbjct: 367 STVVISGVKFDQIHGTYGMQPVHLACSNSIPCTDVDLTDIQ 407
>gi|118488018|gb|ABK95830.1| unknown [Populus trichocarpa]
Length = 516
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + ++D++ ++ DSPNT+GIH
Sbjct: 247 MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDMRTSSPGDSPNTDGIH 306
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I + +A GDDCVS+ GHGIS+G LGK V +
Sbjct: 307 LQNSKDVLIHSTDLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGKDNTKACVSNI 366
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ GT NI + V+ PIVIDQ YC + C +
Sbjct: 367 TVRDVVLHGTMTGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSICKNQT- 425
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S + + IRGT ++ +PC ++ + I
Sbjct: 426 SAVALSGITYEKIRGTYTVKPVHFACSDALPCMDVSLTTIE 466
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV DFGA +G DD+KAF+ AW EAC + ++ ++ P +Y+
Sbjct: 101 FNVLDFGAKGNGKSDDTKAFQAAWAEACK---VAASTMIVPAEYV 142
>gi|297849410|ref|XP_002892586.1| hypothetical protein ARALYDRAFT_471186 [Arabidopsis lyrata subsp.
lyrata]
gi|297338428|gb|EFH68845.1| hypothetical protein ARALYDRAFT_471186 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF+ +TGI +S H+ C + ++D+ +++ DSPNT+GIH
Sbjct: 112 MPSTKPTALRFSGSLGVEVTGITIQNSPQCHLKFDDCLGVVVHDIAVSSPGDSPNTDGIH 171
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ ++ I + +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 172 LQNTRDVLIHSTTLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKEGTKACVSNI 231
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI N V+ PI+IDQ YC ++KC +
Sbjct: 232 TVRDVAMHNTMTGVRIKTWQGGVGSVKGIIFSNIQLNEVQIPIMIDQFYCDHSKCKNQT- 290
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V V + I+GT ++ PC ++ + +I
Sbjct: 291 SAVAVEGVTYERIKGTYTVKPVHFACSDNFPCVDVQLSSIE 331
>gi|357487387|ref|XP_003613981.1| Polygalacturonase [Medicago truncatula]
gi|355515316|gb|AES96939.1| Polygalacturonase [Medicago truncatula]
Length = 400
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/183 (37%), Positives = 94/183 (51%), Gaps = 40/183 (21%)
Query: 57 TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG 116
TI+ + ++S HI+I C N +++L+I A +SPNT+GI I SS+ I++ I TG
Sbjct: 164 TISNLNHINSPRNHISIDSCKNASISNLQIIAPENSPNTDGIDIASSSNIIINNLSIKTG 223
Query: 117 DDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------- 153
DDC+++ GHGISVGSLGKG V + V++CTFTGT
Sbjct: 224 DDCIAINSGSNFINITGVLCGPGHGISVGSLGKGGEYATVEEVHVKDCTFTGTTNGARIK 283
Query: 154 ---------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS 198
NI V+NPI+I+Q Y P+ VK S+V F NI GTS
Sbjct: 284 TWKGGSGYARKITYENIKLVEVKNPIIINQNYNPH--IYDSSSEVVKVSDVTFLNIHGTS 341
Query: 199 ANK 201
N+
Sbjct: 342 VNE 344
>gi|114841681|dbj|BAF32142.1| pollen allergen [Taxodium distichum]
Length = 465
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 111/255 (43%), Gaps = 59/255 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+ +F I G+ ++S FH+ C +K+ + I A +SPNT+GI I +S
Sbjct: 155 AIKIDFSKAVIIQGLTLMNSPEFHLAFGNCEGVKIIGINIKAPRNSPNTDGIDIFASKNF 214
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I + I TGDDCV++ GHGIS+GSLG+G + EV + V F
Sbjct: 215 VIQKNTIGTGDDCVAIGTGSSHIVIKDLICGPGHGISIGSLGRGNSRAEVSYVHVNGAKF 274
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 275 IDTQNGLRIKTWQGGSGLASHITYENVEMVNSENPIIINQFYCTQASGCQNQRSAVQIQD 334
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNINW----------VYNGVNVKVEGPET 228
V + NI GTSA + +PC+NI + +I+ + N GP
Sbjct: 335 VTYKNIHGTSATPAAIQLMCSDSVPCKNIKLSDISLKITSGKSASCLNNNALGYFSGP-V 393
Query: 229 TSLCSNVKPTLFGKQ 243
C N++P++ KQ
Sbjct: 394 IPACKNLRPSVKRKQ 408
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
VFNV+ +GAV DG D ++AF AW+ AC SA+L PG
Sbjct: 28 VFNVEKYGAVGDGKHDCTEAFSRAWQAACK---KPSAMLFVPG 67
>gi|357138599|ref|XP_003570878.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 497
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 111/233 (47%), Gaps = 55/233 (23%)
Query: 66 SRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--- 122
++ H+ + + + ++ + I+A DSPNT+GIH+ S I+ I TGDDC+S+
Sbjct: 246 AQQMHLTVSRSHAVSVSGVIISAPRDSPNTDGIHVSESTAVTITSCRIGTGDDCISISNA 305
Query: 123 -------------GHGISVGSLGKGINDEEVVGLTVRNC------------TFTG----- 152
GHGIS+GSLG+G + V G+T+ N T+ G
Sbjct: 306 SFAIKMKGIVCDPGHGISIGSLGQGGSYAAVEGVTLDNARISNAQNGVRIKTWQGGTGYV 365
Query: 153 -----TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS--------- 198
+N++ V++PI+IDQ YC + V+ S+V + NI GTS
Sbjct: 366 RDVRFSNVLVEGVDHPIIIDQFYCDSRTPCQNQSTNVQVSDVMYRNITGTSTRAEAIKFA 425
Query: 199 -ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGK-QIPATCV 249
+ +PC +I + NI+ ++ +G E ++C+ V +G + PA C+
Sbjct: 426 CSETVPCSDIVLSNIDL------LREDGDELHTVCNCVMGFDYGPVRPPADCL 472
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG----KYLSIRF 50
V NV FGA DG DD++AF AW++AC+ + +AVLV P K ++RF
Sbjct: 101 VVNVDSFGAAGDGTADDTEAFRNAWKKACS---LSNAVLVVPANRRYKVGTMRF 151
>gi|224107817|ref|XP_002314612.1| predicted protein [Populus trichocarpa]
gi|222863652|gb|EEF00783.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 101/221 (45%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + ++D++ ++ DSPNT+GIH
Sbjct: 113 MPSIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVVVHDMRTSSPGDSPNTDGIH 172
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I + +A GDDCVS+ GHGIS+G LGK V +
Sbjct: 173 LQNSKDVLIHSTDLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGKDNTKACVSNI 232
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ GT NI + V+ PIVIDQ YC + C +
Sbjct: 233 TVRDVVLHGTMTGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKSICKNQT- 291
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S + + IRGT ++ +PC ++ + I
Sbjct: 292 SAVALSGITYEKIRGTYTVKPVHFACSDALPCMDVSLTTIE 332
>gi|413948023|gb|AFW80672.1| hypothetical protein ZEAMMB73_326479 [Zea mays]
Length = 766
Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 39/188 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+RF ND T+ G++ +S FH+ C ++++ L + + A SPNT+G+H+ ++ +
Sbjct: 501 VRFFLSNDVTVRGLRIENSPQFHLKFDDCERVRVDGLFVRSPAFSPNTDGVHVENTTSVQ 560
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I +S I GDDCVS+ GHGIS+GSLG V +TVRN
Sbjct: 561 ILNSRIYNGDDCVSIGAGCSDVRIENITCGHGHGISIGSLGVHGTRACVSNITVRNARIL 620
Query: 152 -------------GTNIVT---------NNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
GT VT NV+N I+IDQ YC + C + S V+ + V
Sbjct: 621 DSDNGVRIKTWQGGTGAVTAVEFAGVQMQNVKNCILIDQYYCLGSGC-ANLSSAVRVAGV 679
Query: 190 RFNNIRGT 197
+ +IRGT
Sbjct: 680 TYRDIRGT 687
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
VF+V+ FGA G +D++A AW+ AC+ + +LVP +I
Sbjct: 365 VFDVRAFGASGSGSGNDTRALRAAWKAACSSNSTTPTLLVPSDGVFTI 412
>gi|357455211|ref|XP_003597886.1| Polygalacturonase [Medicago truncatula]
gi|355486934|gb|AES68137.1| Polygalacturonase [Medicago truncatula]
Length = 404
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 113/256 (44%), Gaps = 50/256 (19%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W++ C + PP +I N I G S++ HI + C ++++
Sbjct: 138 WKQPCIGNPPPGTSCRPP---TAITLNRCYRFQIKGYTSINPARSHITLTSCKKGIISNI 194
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
++ A +SPNT+GI I +S ++ +S IATGDDC+++ GHGIS+
Sbjct: 195 RLIAPGESPNTDGIDISASRDIQVLNSFIATGDDCIAISAGSSVIKITAITCGPGHGISI 254
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + + V + V+NCT T T NI NPI I
Sbjct: 255 GSLGARGDTDIVEDVHVKNCTLTETLTGVRIKTKQGGGGFARRITFENIKFVRAHNPIWI 314
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----ANKIPC-QNIGIGNINWVYNGVNV 221
DQ YC + +K S+V + I GTS A + C QN+G N+ V++ V V
Sbjct: 315 DQFYCVNQMVCRNMTKAIKVSDVTYRGISGTSLTDKAINLNCDQNVGCSNL--VFDRVYV 372
Query: 222 KVEGPETT--SLCSNV 235
+ P+ S C N
Sbjct: 373 RSAVPKMKVFSFCHNA 388
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV +GAV DG +DS AF AW++ CN S +++P K +R
Sbjct: 28 FNVLQYGAVGDGKTNDSPAFLKAWKDVCNSKSGTSRLIIPAAKTFLLR 75
>gi|226502228|ref|NP_001150912.1| polygalacturonase precursor [Zea mays]
gi|195642914|gb|ACG40925.1| polygalacturonase precursor [Zea mays]
Length = 536
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + ++GI V+S H+ C + ++D+ I++ S NT+GIH
Sbjct: 266 MPQIKPTALRFYGSFNVVVSGITIVNSSQCHLKFDNCQGVMVHDVTISSPEKSLNTDGIH 325
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDC+S+ GHGIS+G LG+ V +
Sbjct: 326 LQNSKDVSIHHTTLACGDDCISIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNV 385
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + V+ PI+IDQ YC + C +
Sbjct: 386 TVRDVNMFRTMNGVRIKTWQGGVGSVQDIRFSNIQVSEVQTPIIIDQFYCDRSTCRNQT- 444
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V+ S V++ NIRGT ++ +PC I + +
Sbjct: 445 SAVEVSGVQYENIRGTFTIKPVHFACSDSLPCSGISLTGVQ 485
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V DFGA DG DD+KAF+ AW AC S +LVPP
Sbjct: 137 VFSVVDFGAKGDGATDDTKAFQGAWAAACTQGA--STLLVPP 176
>gi|158442660|gb|ABW38780.1| dehiscence polygalacturonase [Solanum lycopersicum]
Length = 392
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 129/344 (37%), Gaps = 136/344 (39%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF--------- 52
NV FGA DG DD+ AF+ AW+EAC+ + + V+ KYL F
Sbjct: 16 INVDSFGAKGDGSIDDTNAFQKAWKEACSSSHVVNFVVSQNKKYLLKPIKFYGPCKSSIT 75
Query: 53 ------LNDSTITGIKSVDSRYFHI----------------------------------- 71
L S T DSR++ I
Sbjct: 76 MQIYGTLLASDDTSDYKKDSRHWLIFDSVQKLVVGGAGVINGNGKIWWQHSCKINKKLPC 135
Query: 72 -------NILGCYNLKLNDLKI-----------------------TAHADSPNTEGIHIG 101
C NLK+ DLKI T+ +SPNT+GIHI
Sbjct: 136 KVAPTALTFYKCNNLKVKDLKIENAQQIHLLIEKCVGVEVTKLVVTSPENSPNTDGIHIT 195
Query: 102 SSNGSEISHSVIATGDDCVSLGHGISVGSLGKGI----------------NDEEVV---- 141
S+ +IS S IATGDDC+S+ G S L GI N E V
Sbjct: 196 STQNIQISDSTIATGDDCISIVDG-SQKVLATGITCGPGHGISIGSLGGGNSEAHVSDIH 254
Query: 142 -----------GLTVRNCTFTG----------TNIVTNNVENPIVIDQLYCPY--NKCNI 178
GL ++ T+ G N+V NNV+NPI+IDQ YC C
Sbjct: 255 VNGAKLYETTNGLRIK--TWPGGFGSASNIKYQNVVMNNVKNPIIIDQNYCDQADGPCKA 312
Query: 179 KVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNI 212
+ S V+ NV + NI+GTSA KIPC+ I + N+
Sbjct: 313 ETDSAVEVKNVIYQNIKGTSATNDAISIKCSKKIPCEGILMENV 356
>gi|46485878|gb|AAS98503.1| unknown protein [Oryza sativa Japonica Group]
Length = 504
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 50/214 (23%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+RF + + G++ +S FH GC +++++ L I + A+SPNT+GIH+ ++
Sbjct: 242 VRFFMSRNLVVEGLRVENSPEFHFRFDGCSDVRVDGLSIRSPANSPNTDGIHVENTQRVA 301
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S+I+ GDDC+S+ GHGIS+GSLG + V +TVRN
Sbjct: 302 IYNSMISNGDDCISIGTGSYDVDIQNVSCGPGHGISIGSLGVHNSQACVANVTVRNAVIR 361
Query: 149 ----------------TFTGTNIVT---NNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
+ +G N T NV N I+IDQ YC +C + + V ++V
Sbjct: 362 NSDNGLRIKTWQGGMGSVSGINFDTVSMENVRNCIIIDQYYCLDKRC-MNQSTAVHVTDV 420
Query: 190 RFNNIRGT-----------SANKIPCQNIGIGNI 212
+ N+RG+ ++ +PC NI + +
Sbjct: 421 SYANVRGSYDVRAAPIHFACSDTVPCTNITMSEV 454
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V+ FGAV DG DD++AF AWR AC ++SAV+ P
Sbjct: 89 VFDVRAFGAVGDGTTDDTEAFRAAWRAAC---AVESAVISVP 127
>gi|449450460|ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 505
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF ++T+TGI +S H+ C + ++D+ +++ DS NT+GIH
Sbjct: 235 MPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIH 294
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I + ++ GDDCVS+ GHGIS+GSLGK V +
Sbjct: 295 LQNSKDVLIHSTSLSCGDDCVSIQTGCSNIYIHNVNCGPGHGISIGSLGKDHTKACVSNI 354
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T NI + V+ PIVIDQ YC KC+ +
Sbjct: 355 TVRDVTMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAKCSNQT- 413
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S + + IRGT ++ +PC ++ + I
Sbjct: 414 SAVALSGINYERIRGTYTVKPVHFACSDNLPCTDVTLTTIE 454
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
+FNV DFGA +G DD+KAFE AW EAC +G S V+VP
Sbjct: 88 IFNVLDFGAKGNGETDDTKAFEDAWAEACKVEG--STVMVP 126
>gi|224092464|ref|XP_002309621.1| predicted protein [Populus trichocarpa]
gi|222855597|gb|EEE93144.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 99/205 (48%), Gaps = 45/205 (21%)
Query: 64 VDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL- 122
V+S H+N+ C + ++ LKITA +SPNT+GI + SS+ I S I TGDDC+++
Sbjct: 139 VNSPRSHVNLNDCKGVSISGLKITAPGNSPNTDGIDVSSSSHVSIVDSTIGTGDDCIAIK 198
Query: 123 ---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------------- 153
GHGIS+GSLG+ E+V + VRNC FTGT
Sbjct: 199 GGCSNINITGINCGPGHGISIGSLGENGATEQVEEVHVRNCNFTGTENGARIKTVPGGSG 258
Query: 154 --------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQ-VKTSNVRFNNIRGTSANK--- 201
I N +PI+IDQ YC K P Q V S+V F +RGTS+++
Sbjct: 259 YVRRITFEQITLNAAGSPIIIDQHYCDGKK--EGCPDQAVAVSDVTFTGVRGTSSDEQVI 316
Query: 202 -IPCQNIGIGNINWVYNGVNVKVEG 225
+ C IG NI V + V G
Sbjct: 317 TLDCAAIGCNNIRMVQVAITSSVAG 341
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+FNV FGAV DG DDS AF AW C G +++PPG+ S++
Sbjct: 2 LFNVLSFGAVGDGKTDDSPAFTKAWGALCGASGGTPTLVIPPGRAFSLK 50
>gi|115462973|ref|NP_001055086.1| Os05g0279900 [Oryza sativa Japonica Group]
gi|113578637|dbj|BAF17000.1| Os05g0279900 [Oryza sativa Japonica Group]
gi|125551651|gb|EAY97360.1| hypothetical protein OsI_19283 [Oryza sativa Indica Group]
gi|222630956|gb|EEE63088.1| hypothetical protein OsJ_17896 [Oryza sativa Japonica Group]
Length = 485
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 103/214 (48%), Gaps = 50/214 (23%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+RF + + G++ +S FH GC +++++ L I + A+SPNT+GIH+ ++
Sbjct: 223 VRFFMSRNLVVEGLRVENSPEFHFRFDGCSDVRVDGLSIRSPANSPNTDGIHVENTQRVA 282
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S+I+ GDDC+S+ GHGIS+GSLG + V +TVRN
Sbjct: 283 IYNSMISNGDDCISIGTGSYDVDIQNVSCGPGHGISIGSLGVHNSQACVANVTVRNAVIR 342
Query: 149 ----------------TFTGTNIVT---NNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
+ +G N T NV N I+IDQ YC +C + + V ++V
Sbjct: 343 NSDNGLRIKTWQGGMGSVSGINFDTVSMENVRNCIIIDQYYCLDKRC-MNQSTAVHVTDV 401
Query: 190 RFNNIRGT-----------SANKIPCQNIGIGNI 212
+ N+RG+ ++ +PC NI + +
Sbjct: 402 SYANVRGSYDVRAAPIHFACSDTVPCTNITMSEV 435
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V+ FGAV DG DD++AF AWR AC ++SAV+ P
Sbjct: 89 VFDVRAFGAVGDGTTDDTEAFRAAWRAAC---AVESAVISVP 127
>gi|255560874|ref|XP_002521450.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223539349|gb|EEF40940.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 466
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 110/253 (43%), Gaps = 55/253 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF D T+TGI +S H+ C +++++ + +SPNT+GIH
Sbjct: 204 MPGTKPTALRFYGSTDVTVTGITIQNSPQTHLKFDDCTGVQVSEFTAASPENSPNTDGIH 263
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S ++ GDDCVS+ GHGIS+G LGK V +
Sbjct: 264 LQNSRDVVIYSSDLSCGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGKDNTKACVSNV 323
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + VE PI+IDQ YC +KC +
Sbjct: 324 TVRDVQMQNTLTGVRIKTWQGGSGSVQGVTFSNIQVSGVETPIMIDQFYCDGSKCRNE-S 382
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
S V S + + NI+GT ++ PC + + I +K G + C
Sbjct: 383 SAVAVSGINYMNIKGTYTRNPLHLACSDNSPCTGVSLETI-------ELKSVGENSQPFC 435
Query: 233 SNVKPTLFGKQIP 245
N L +P
Sbjct: 436 WNTYGELRSATVP 448
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV D+GA DG DD+KAFE AW AC + S ++VP G +
Sbjct: 77 FNVLDYGAKGDGRTDDTKAFEAAWIAACKVEA--STIVVPSGSMFLVH 122
>gi|356567642|ref|XP_003552026.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 538
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 104/220 (47%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + ++D+ I++ DSPNT+GIH
Sbjct: 269 MPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDNCNGVMVHDVTISSPGDSPNTDGIH 328
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 329 LQNSKDVLIYSSSMACGDDCISIQTGCSNIYVHNVNCGPGHGISIGSLGKDNTRACVSNI 388
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + VE PIVIDQ YC C +
Sbjct: 389 TVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQT- 447
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V + + + IRGT ++ +PC ++ + ++
Sbjct: 448 SAVSLAGINYERIRGTYTVKPVHFACSDNLPCVDVSLTSV 487
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
FNV DFGA DG DD+KAF+ AW EAC I+S+ ++ P Y
Sbjct: 121 TFNVLDFGAKGDGKSDDTKAFQEAWAEACK---IESSTMLVPADY 162
>gi|15223166|ref|NP_177207.1| pectin lyase-like protein [Arabidopsis thaliana]
gi|12325038|gb|AAG52465.1|AC010796_4 putative polygalacturonase; 18642-16492 [Arabidopsis thaliana]
gi|332196950|gb|AEE35071.1| pectin lyase-like protein [Arabidopsis thaliana]
Length = 468
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 50/216 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G+ +S+ H+ I ++++ + +T+ DSPNT+GIHI +S + S I+TGD
Sbjct: 203 VRGLTIRNSQQMHLIIQRSTTVRISRVMVTSPGDSPNTDGIHITASTDVVVQDSKISTGD 262
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DCVS+ GHGIS+GSLG+G + V + + T
Sbjct: 263 DCVSIVNGSAKIKMKRIYCGPGHGISIGSLGQGHSKGTVTAVVLETAFLKNTTNGLRIKT 322
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS- 198
N+V +V NPI+IDQ YC S V S + + NI GT+
Sbjct: 323 WQGGNGYVKGVRFENVVMQDVANPIIIDQFYCDSPSTCQNQTSAVHISEIMYRNITGTTK 382
Query: 199 ---------ANKIPCQNIGIGNINWVYNGVNVKVEG 225
++ +PC +I + NIN G + KVE
Sbjct: 383 SSKAINFKCSDAVPCSHIVLNNIN--LEGNDGKVEA 416
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL 46
+ NV F A DG+ DD++AF AW AC+ S +LVP G+ YL
Sbjct: 66 LVNVDSFNASGDGVSDDTQAFIRAWTMACS--APNSVLLVPQGRSYL 110
>gi|414881282|tpg|DAA58413.1| TPA: polygalacturonase [Zea mays]
Length = 542
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 104/221 (47%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + ++GI V+S H+ C + ++D+ I++ +S NT+GIH
Sbjct: 272 MPQIKPTALRFYGSFNVVVSGITIVNSSQCHLKFDNCQGVMVHDVTISSPENSLNTDGIH 331
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDC+S+ GHGIS+G LG+ V +
Sbjct: 332 LQNSKDVSIHHTTLACGDDCISIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNV 391
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + V+ PI+IDQ YC + C +
Sbjct: 392 TVRDVNMFRTMNGVRIKTWQGGVGLVQDIRFSNIQVSEVQTPIIIDQFYCDRSTCRNQT- 450
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S V++ NIRGT ++ +PC I + +
Sbjct: 451 SAVAVSGVQYENIRGTFTIKPVHFACSDSLPCSGISLTGVQ 491
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VFNV DFGA DG+ DD+KAF+ AW AC S +LVPP
Sbjct: 143 VFNVVDFGAKGDGVTDDTKAFQGAWAAACTQGA--STLLVPP 182
>gi|449500405|ref|XP_004161089.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like
[Cucumis sativus]
Length = 423
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF ++T+TGI +S H+ C + ++D+ +++ DS NT+GIH
Sbjct: 153 MPSIKPTALRFYGSFNATVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIH 212
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I + ++ GDDCVS+ GHGIS+GSLGK V +
Sbjct: 213 LQNSKDVLIHSTSLSCGDDCVSIQTGCSNIYIHNVNCGPGHGISIGSLGKDHTKACVSNI 272
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T NI + V+ PIVIDQ YC KC+ +
Sbjct: 273 TVRDVTMHDTMNGVRIKTWQGGSGSVQNVLFSNIQMSEVQLPIVIDQFYCDKAKCSNQT- 331
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V S + + IRGT ++ +PC ++ + I
Sbjct: 332 SAVALSGINYERIRGTYTVKPVHFACSDNLPCTDVTLTTI 371
>gi|224055547|ref|XP_002298533.1| predicted protein [Populus trichocarpa]
gi|222845791|gb|EEE83338.1| predicted protein [Populus trichocarpa]
Length = 386
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 48/213 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++RF +TGI +S H+ C ++++D K + +SPNT+GIH+ +S+
Sbjct: 132 ALRFYGSTRVIVTGITIQNSPQTHLKFDDCTTVQVSDFKAASPENSPNTDGIHLENSHDV 191
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC-- 148
I S +A GDDCVS+ GHGIS+G LG+ + V +TVR+
Sbjct: 192 LIYSSDLACGDDCVSIQTGCSQVYIHNVNCGPGHGISIGGLGRDNSKACVSNVTVRDVAM 251
Query: 149 --TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T TG +NI + V+ PI+IDQ YC +KC + S V S+
Sbjct: 252 LNTLTGVRIKTWQGGSGSVQGVTFSNIQVSGVKTPIMIDQFYCDRSKCQNE-SSAVAVSD 310
Query: 189 VRFNNIRGTSANK---------IPCQNIGIGNI 212
+ + NI+GT A+K +PC I I
Sbjct: 311 INYINIKGTYASKPVHLACSDDLPCTGISFSAI 343
Score = 41.2 bits (95), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV +FGA DG DDS+AF W AC ++++ ++ P Y+
Sbjct: 11 AFNVLEFGAKGDGKTDDSEAFGATWAAACK---VEASTMIVPSGYV 53
>gi|226501180|ref|NP_001148771.1| polygalacturonase precursor [Zea mays]
gi|195622048|gb|ACG32854.1| polygalacturonase precursor [Zea mays]
Length = 541
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + + GI V+S H+ C + ++DL I++ +S NT+GIH
Sbjct: 271 MPQIKPTALRFYGSFNVVVAGITIVNSSQCHLKFDNCQGVMVHDLTISSPENSLNTDGIH 330
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDC+S+ GHGIS+G LG+ V +
Sbjct: 331 LQNSKDVSIHHTNLACGDDCISIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNV 390
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + V+ PI+IDQ YC + C +
Sbjct: 391 TVRDVNMFRTMNGVRIKTWQGGVGLVQDIRFSNIQVSEVQTPIIIDQFYCDRSTCRNQT- 449
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S V++ NIRGT ++ +PC I + +
Sbjct: 450 SAVAVSGVQYENIRGTFTIKPVHFACSDSLPCSGISLTGVQ 490
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VFNV DFGA DG+ DD+KAFE AW AC VLVPP
Sbjct: 142 VFNVVDFGAKGDGVTDDTKAFEGAWAAACKKGAC--TVLVPP 181
>gi|125526990|gb|EAY75104.1| hypothetical protein OsI_03000 [Oryza sativa Indica Group]
Length = 374
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 39/196 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + + GI V+S H+ C + ++D+ I++ +S NT+GIH
Sbjct: 104 MPQVKPTALRFYGSFNVVVAGITIVNSSQCHLKFDSCQGVMVHDVTISSPENSLNTDGIH 163
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 164 LQNSKDVSIHHTNLACGDDCVSIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNV 223
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PI+IDQ YC C+ +
Sbjct: 224 TVRDVNMFRTMTGVRIKTWQGGLGLVQDVRFSNIQVSEVQTPIIIDQFYCDERTCSNQT- 282
Query: 182 SQVKTSNVRFNNIRGT 197
S V S V++ NIRGT
Sbjct: 283 SAVAVSGVQYENIRGT 298
>gi|22327096|ref|NP_198105.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332006314|gb|AED93697.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 458
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 88/186 (47%), Gaps = 38/186 (20%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
N+ TI GI S+DS HI+I C+ + ++ + I A +SPNT+GI I S I S I
Sbjct: 172 NNLTINGITSIDSPKSHISIKNCHYVAISKINILAPENSPNTDGIDISYSTNVNIFDSTI 231
Query: 114 ATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---- 153
TGDDC+++ GHGISVGSLG + V + V CTF T
Sbjct: 232 QTGDDCIAINTGSSSINITQVNCGPGHGISVGSLGADGENAAVSDVYVTQCTFNKTTNGA 291
Query: 154 ------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIR 195
NI NV+NPI+IDQ Y + S V S+V++ +
Sbjct: 292 RIKTWQGGQGYARNISFENITLINVQNPIIIDQQYTDKVLLDATKDSAVAISSVKYVGFQ 351
Query: 196 GTSANK 201
GT+ N+
Sbjct: 352 GTTLNE 357
>gi|115444007|ref|NP_001045783.1| Os02g0130200 [Oryza sativa Japonica Group]
gi|113535314|dbj|BAF07697.1| Os02g0130200 [Oryza sativa Japonica Group]
gi|215741344|dbj|BAG97839.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 508
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 52/207 (25%)
Query: 57 TITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG 116
++ ++ +++ H+ + +++L +++ + DSPNT+GIH+ S I IATG
Sbjct: 243 SVRNLRLQNAQQMHLTVSRSRDVRLASVRVDSPEDSPNTDGIHVADSTAVTIQSCRIATG 302
Query: 117 DDCVSL----------------GHGISVGSLGKGINDEEVVGLT---------------- 144
DDC+S+ GHGIS+GSLG+G V G++
Sbjct: 303 DDCISISNGSFAVRMRDIDCGPGHGISIGSLGQGGAFAAVDGVSLDGARVARAQNGVRIK 362
Query: 145 --------VRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRG 196
VRN F G + + V++PIVIDQ YC + S V+ S V F NI G
Sbjct: 363 TWQGGAGYVRNVRFAGVRV--DGVDHPIVIDQFYCDATRPCRNRTSNVRVSGVVFRNITG 420
Query: 197 TS----------ANKIPCQNIGIGNIN 213
T+ ++ +PC I + +I+
Sbjct: 421 TARRAEAIRLACSDAVPCVGIVLSDID 447
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
V NV FGA DG DD++AF AW++AC+ + + LVP G+ +
Sbjct: 107 VVNVDSFGAAGDGCSDDTEAFLNAWKKACSLN--NAVFLVPGGRRYKV 152
>gi|242052853|ref|XP_002455572.1| hypothetical protein SORBIDRAFT_03g013310 [Sorghum bicolor]
gi|241927547|gb|EES00692.1| hypothetical protein SORBIDRAFT_03g013310 [Sorghum bicolor]
Length = 693
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 39/191 (20%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+L +RF ND + G++ +S FH+ C ++++ L +++ A SPNT+G+H+ ++
Sbjct: 419 FLLVRFFSSNDVAVRGLRIENSPQFHLKFDACDRVRVDGLFVSSPASSPNTDGVHVENTT 478
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
+I +S I GDDCVS+ GHGIS+GSLG V +TVRN
Sbjct: 479 SVQILNSRIYNGDDCVSIGAGCSDVHIENITCGHGHGISIGSLGVHNTRACVSNVTVRNA 538
Query: 149 TFT-------------GTNIVT---------NNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
GT V+ NV+N IVIDQ YC + C + S V+
Sbjct: 539 RIVDSDNGVRIKTWQGGTGAVSAVEFAGVQMQNVKNCIVIDQYYCLGSGCANQT-SAVRV 597
Query: 187 SNVRFNNIRGT 197
+ V + +IRGT
Sbjct: 598 AGVTYRDIRGT 608
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
VF+V+ FGA + +D++AF AW+ AC+ + + +LVP
Sbjct: 262 VFDVRAFGASGNASGNDTRAFRAAWKAACSSNTTTATLLVP 302
>gi|224033293|gb|ACN35722.1| unknown [Zea mays]
gi|413950730|gb|AFW83379.1| polygalacturonase [Zea mays]
Length = 541
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + + GI V+S H+ C + ++DL I++ +S NT+GIH
Sbjct: 271 MPQIKPTALRFYGSFNVVVAGITIVNSSQCHLKFDNCQGVMVHDLTISSPENSLNTDGIH 330
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDC+S+ GHGIS+G LG+ V +
Sbjct: 331 LQNSKDVSIHHTNLACGDDCISIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNV 390
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + V+ PI+IDQ YC + C +
Sbjct: 391 TVRDVNMFRTMNGVRIKTWQGGVGLVQDIRFSNIQVSEVQTPIIIDQFYCDRSTCRNQT- 449
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S V++ NIRGT ++ +PC I + +
Sbjct: 450 SAVAVSGVQYENIRGTFTIKPVHFACSDSLPCSGISLTGVQ 490
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VFNV DFGA DG+ DD+KAFE AW AC VLVPP
Sbjct: 142 VFNVVDFGAKGDGVTDDTKAFEGAWAAACKKGAC--TVLVPP 181
>gi|55297004|dbj|BAD68575.1| polygalacturonase PG1-like [Oryza sativa Japonica Group]
gi|55297593|dbj|BAD68939.1| polygalacturonase PG1-like [Oryza sativa Japonica Group]
Length = 423
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 39/196 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + + GI V+S H+ C + ++D+ I++ +S NT+GIH
Sbjct: 153 MPQVKPTALRFYGSFNVVVAGITIVNSSQCHLKFDSCQGVMVHDVTISSPENSLNTDGIH 212
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 213 LQNSKDVSIHHTNLACGDDCVSIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNV 272
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PI+IDQ YC C+ +
Sbjct: 273 TVRDVNMFRTMTGVRIKTWQGGLGLVQDVRFSNIQVSEVQTPIIIDQFYCDERTCSNQT- 331
Query: 182 SQVKTSNVRFNNIRGT 197
S V S V++ NIRGT
Sbjct: 332 SAVAVSGVQYENIRGT 347
>gi|125597244|gb|EAZ37024.1| hypothetical protein OsJ_21369 [Oryza sativa Japonica Group]
Length = 429
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 54/231 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++R + +TGI +S FH+ C +++ + I + DSPNT+GIH+ S G
Sbjct: 177 ALRVYESTNVAVTGITIQNSARFHLTFDTCRAVEVRGVAIRSPGDSPNTDGIHLAGSVGV 236
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKG----------INDEEV 140
I ++ +A GDDCVS+ GHGIS+G LGKG + D +
Sbjct: 237 SIQNATVACGDDCVSIQDGCSRVLVRGVTCGPGHGISIGGLGKGGAMAVVSDVTVQDVSL 296
Query: 141 VGL--------------TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
VG +VR F+G + + V+ PIVIDQ YC + C + + V
Sbjct: 297 VGTSAGVRIKTWQGGSGSVRGVLFSGVRV--SAVKTPIVIDQYYCDHATCANQT-AAVAV 353
Query: 187 SNVRFNNIRGTSANK---------IPCQNIGIGNINW--VYNGVNVKVEGP 226
S V ++ I GT + PC + + +I V G ++ GP
Sbjct: 354 SGVAYSGITGTYTQRPVYLACSDAAPCAGLRLEDIKLAPVKEGGYGRLYGP 404
>gi|41052554|dbj|BAD07736.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 481
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 56/239 (23%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C D K P ++ + ++ ++ +++ H+ + +++L +
Sbjct: 188 WANSCKIDRSKPCKGAP----TALTIDSCRGVSVRNLRLQNAQQMHLTVSRSRDVRLASV 243
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
++ + DSPNT+GIH+ S I IATGDDC+S+ GHGIS+
Sbjct: 244 RVDSPEDSPNTDGIHVADSTAVTIQSCRIATGDDCISISNGSFAVRMRDIDCGPGHGISI 303
Query: 129 GSLGKGINDEEVVGLT------------------------VRNCTFTGTNIVTNNVENPI 164
GSLG+G V G++ VRN F G + + V++PI
Sbjct: 304 GSLGQGGAFAAVDGVSLDGARVARAQNGVRIKTWQGGAGYVRNVRFAGVRV--DGVDHPI 361
Query: 165 VIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNIN 213
VIDQ YC + S V+ S V F NI GT+ ++ +PC I + +I+
Sbjct: 362 VIDQFYCDATRPCRNRTSNVRVSGVVFRNITGTARRAEAIRLACSDAVPCVGIVLSDID 420
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
V NV FGA DG DD++AF AW++AC+ + + LVP G+ +
Sbjct: 80 VVNVDSFGAAGDGCSDDTEAFLNAWKKACSLN--NAVFLVPGGRRYKV 125
>gi|413956537|gb|AFW89186.1| polygalacturonase [Zea mays]
Length = 462
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 96/223 (43%), Gaps = 51/223 (22%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C + V P YL R L + ++ DS H+ I ++ ++ L
Sbjct: 194 WINSCKLNRSARCVTGPTALYLR-RCTRL---VVEELQVRDSMQMHVAIAYSRDVAVSRL 249
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA A SPNT+GIH+ +S IS IATGDDCVS+ GHGIS+
Sbjct: 250 SITAPAWSPNTDGIHVSNSREVSISRCTIATGDDCVSIVTGSTFVRVTSIFCGPGHGISI 309
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + V + V T GT +I NV NPI+I
Sbjct: 310 GSLGANNSWAHVSDVLVEKATLLGTTNGVRIKTWQGGYGYAERISFRDISMRNVTNPIII 369
Query: 167 DQLYCPYNKCNIKVPSQ-------VKTSNVRFNNIRGTSANKI 202
DQ YC + PS V N+ + NI GTSA+++
Sbjct: 370 DQNYC--DSARTTTPSSCHDQGSAVAVRNISYRNIHGTSASRV 410
>gi|219886807|gb|ACL53778.1| unknown [Zea mays]
Length = 437
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 96/223 (43%), Gaps = 51/223 (22%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C + V P YL R L + ++ DS H+ I ++ ++ L
Sbjct: 169 WINSCKLNRSARCVTGPTALYLR-RCTRL---VVEELQVRDSMQMHVAIAYSRDVAVSRL 224
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA A SPNT+GIH+ +S IS IATGDDCVS+ GHGIS+
Sbjct: 225 SITAPAWSPNTDGIHVSNSREVSISRCTIATGDDCVSIVTGSTFVRVTSIFCGPGHGISI 284
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + V + V T GT +I NV NPI+I
Sbjct: 285 GSLGANNSWAHVSDVLVEKATLLGTTNGVRIKTWQGGYGYAERISFRDISMRNVTNPIII 344
Query: 167 DQLYCPYNKCNIKVPSQ-------VKTSNVRFNNIRGTSANKI 202
DQ YC + PS V N+ + NI GTSA+++
Sbjct: 345 DQNYC--DSARTTTPSSCHDQGSAVAVRNISYRNIHGTSASRV 385
>gi|115438773|ref|NP_001043666.1| Os01g0636500 [Oryza sativa Japonica Group]
gi|55297585|dbj|BAD68931.1| polygalacturonase PG1-like [Oryza sativa Japonica Group]
gi|113533197|dbj|BAF05580.1| Os01g0636500 [Oryza sativa Japonica Group]
gi|218188725|gb|EEC71152.1| hypothetical protein OsI_02991 [Oryza sativa Indica Group]
gi|222618920|gb|EEE55052.1| hypothetical protein OsJ_02751 [Oryza sativa Japonica Group]
Length = 538
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 95/196 (48%), Gaps = 39/196 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + + GI V+S H+ C + ++D+ I++ +S NT+GIH
Sbjct: 268 MPQVKPTALRFYGSFNVVVAGITIVNSSQCHLKFDSCQGVMVHDVTISSPENSLNTDGIH 327
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 328 LQNSKDVSIHHTNLACGDDCVSIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNV 387
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PI+IDQ YC C+ +
Sbjct: 388 TVRDVNMFRTMTGVRIKTWQGGLGLVQDVRFSNIQVSEVQTPIIIDQFYCDKRTCSNQT- 446
Query: 182 SQVKTSNVRFNNIRGT 197
S V S V++ NIRGT
Sbjct: 447 SAVAVSGVQYENIRGT 462
>gi|218189987|gb|EEC72414.1| hypothetical protein OsI_05716 [Oryza sativa Indica Group]
Length = 481
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 56/239 (23%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C D K P ++ + ++ ++ +++ H+ + +++L +
Sbjct: 188 WANSCKIDRSKPCKGAP----TALTIDSCRGVSVRNLRLQNAQQMHLTVSRSRDVRLASV 243
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
++ + DSPNT+GIH+ S I IATGDDC+S+ GHGIS+
Sbjct: 244 RVDSPEDSPNTDGIHVADSTAVTIQSCRIATGDDCISISNGSFAVRMRDIDCGPGHGISI 303
Query: 129 GSLGKGINDEEVVGLT------------------------VRNCTFTGTNIVTNNVENPI 164
GSLG+G V G++ VRN F G + + V++PI
Sbjct: 304 GSLGQGGAFAAVDGVSLDGARVARAQNGVRIKTWQGGAGYVRNVRFAGVRV--DGVDHPI 361
Query: 165 VIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNIN 213
VIDQ YC + S V+ S V F NI GT+ ++ +PC I + +I+
Sbjct: 362 VIDQFYCDATRPCRNRTSNVRVSGVVFRNITGTARRAEAIRLACSDAVPCVGIVLSDID 420
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
V NV FGA DG DD++AF AW++AC+ + + LVP G+ +
Sbjct: 80 VVNVDSFGAAGDGCSDDTEAFLNAWKKACSLN--NAVFLVPGGRRYKV 125
>gi|356526793|ref|XP_003532001.1| PREDICTED: polygalacturonase At1g48100 isoform 3 [Glycine max]
Length = 506
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 106/229 (46%), Gaps = 48/229 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W K +P K ++RF + T+TGI +S H+ C + ++++ I++
Sbjct: 228 WWQDKMGGKMPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPG 287
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
DSPNT+GIH+ +S I S +A GDDC+S+ GHGIS+GSLGK
Sbjct: 288 DSPNTDGIHLQNSKDVLIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKD 347
Query: 135 INDEEVVGLTVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCP 172
V +TVR+ T+ G +NI + VE PIVIDQ YC
Sbjct: 348 NTRACVSNITVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCD 407
Query: 173 YNKCNIKVPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
C + S V + + + IRGT ++ +PC ++ + ++
Sbjct: 408 KRTCKNQT-SAVSLAGINYERIRGTYTVKPVHFACSDSLPCVDVSLTSV 455
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV DFGA DG DD+KAF+ AW EAC ++S+ ++ P Y+
Sbjct: 121 TFNVLDFGAKGDGKSDDTKAFQEAWAEACK---VESSTMLVPADYV 163
>gi|357113394|ref|XP_003558488.1| PREDICTED: polygalacturonase-like [Brachypodium distachyon]
Length = 429
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 95/216 (43%), Gaps = 42/216 (19%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C + V P Y F + ++ DS H+ I + + ++ L
Sbjct: 166 WINSCKVNKTMPCVRGPTALY----FQSCEHLVVEDLQVRDSMQMHVVIAYSWKVLVSRL 221
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
+TA SPNT+GIH+ +S IS +I+TGDDC+S+ GHGIS+
Sbjct: 222 FVTAPGWSPNTDGIHVSNSRDVLISSCIISTGDDCISIVSGSAFVRATGIFCGPGHGISI 281
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + V + V T GT +I NV NPI+I
Sbjct: 282 GSLGANKSWAHVSDVLVEKATLVGTTNGVRIKTWQGGQGFAERITFQDIKMYNVTNPIII 341
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI 202
DQ YC + S V N+R+++I GTSA+K+
Sbjct: 342 DQNYCDSKTPCSEQESAVAIRNIRYSSIHGTSASKV 377
Score = 40.8 bits (94), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNFLNDSTIT 59
VF+V D+GA A D ++AF AW+EACN S LVP GK Y + +F T
Sbjct: 54 VFDVDDYGASAG--NDATEAFLRAWKEACNSSSDPSLFLVPGGKTYRLMPVSFTGPCRAT 111
Query: 60 GIKSV 64
I ++
Sbjct: 112 TITAM 116
>gi|224166212|ref|XP_002338901.1| predicted protein [Populus trichocarpa]
gi|222873867|gb|EEF10998.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 16/108 (14%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ N+ ITG+ S++S+ FHI I GC N+K+ +K++A +SPNT+GIH+
Sbjct: 140 PRGATSLEFSNSNNIAITGLASLNSQLFHIVINGCQNVKVQGVKVSAAGNSPNTDGIHVQ 199
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGK 133
SS G I +S I TGDDCVS+ GHGIS+GSLGK
Sbjct: 200 SSTGVTILNSRIGTGDDCVSIGPGTSSLWIENVACGPGHGISIGSLGK 247
>gi|125555354|gb|EAZ00960.1| hypothetical protein OsI_22993 [Oryza sativa Indica Group]
Length = 432
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 54/231 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++R + +TGI +S FH+ C +++ + I + DSPNT+GIH+ S G
Sbjct: 180 ALRVYESTNVAVTGITIQNSARFHLTFDTCRAVEVRGVAIRSPGDSPNTDGIHLAGSVGV 239
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKG----------INDEEV 140
I ++ +A GDDCVS+ GHGIS+G LGKG + D +
Sbjct: 240 SIQNATVACGDDCVSIQDGCSRVLVRGVTCGPGHGISIGGLGKGGAMAFVSDVTVQDVFL 299
Query: 141 VGL--------------TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
VG +VR F+G + + V+ PIVIDQ YC + C + + V
Sbjct: 300 VGTSAGVRIKTWQGGSGSVRGVLFSGVRV--SAVKTPIVIDQYYCDHATCANQT-AAVAV 356
Query: 187 SNVRFNNIRGTSANK---------IPCQNIGIGNINW--VYNGVNVKVEGP 226
S V ++ I GT + PC + + +I V +G ++ GP
Sbjct: 357 SGVAYSGITGTYTQRPVYLACSDAAPCAGLRLEDIKLAPVKDGGYGRLYGP 407
>gi|124360374|gb|ABN08387.1| Pectolytic enzyme, Pectin lyase fold [Medicago truncatula]
Length = 281
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 75/149 (50%), Gaps = 38/149 (25%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++ F FLN+S I GI S DS+YFH+N+ GC NL D TA A SPN +G
Sbjct: 144 MNFGFYFLNNSIIKGITSKDSKYFHVNVFGCKNLTFMDFSATAPATSPNRDG-------S 196
Query: 106 SEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------ 153
+I+ + G GHGISVGSLGK N+E + +TVRNCT T
Sbjct: 197 KQITILNVTCGP-----GHGISVGSLGKYSNEEPLEYITVRNCTLRNTDNGLRIKTWPTT 251
Query: 154 -------------NIVTNNVENP-IVIDQ 168
NI+ +NV NP I+IDQ
Sbjct: 252 PITYDLVSNLHFENIIMDNVSNPVIIIDQ 280
>gi|356526791|ref|XP_003532000.1| PREDICTED: polygalacturonase At1g48100 isoform 2 [Glycine max]
Length = 523
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + ++++ I++ DSPNT+GIH
Sbjct: 254 MPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIH 313
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 314 LQNSKDVLIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNI 373
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + VE PIVIDQ YC C +
Sbjct: 374 TVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQT- 432
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V + + + IRGT ++ +PC ++ + ++
Sbjct: 433 SAVSLAGINYERIRGTYTVKPVHFACSDSLPCVDVSLTSV 472
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV DFGA DG DD+KAF+ AW EAC ++S+ ++ P Y+
Sbjct: 121 TFNVLDFGAKGDGKSDDTKAFQEAWAEACK---VESSTMLVPADYV 163
>gi|359473233|ref|XP_003631273.1| PREDICTED: probable polygalacturonase At1g80170-like [Vitis
vinifera]
Length = 462
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 96/205 (46%), Gaps = 50/205 (24%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G+ +S+ H I ++++ D++++A DSPNT+GIHI S + + I TGD
Sbjct: 199 VKGLTIQNSQQMHFTISRSQSVRIIDVQVSAPEDSPNTDGIHITDSTNVLLQNCKIGTGD 258
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLGK + V + + + GT
Sbjct: 259 DCISIVSGSSNIKMKTIYCGPGHGISIGSLGKDNSSGIVTKVVLDSAFLRGTTNGLRIKT 318
Query: 154 --------------NIVTNNVENPIVIDQLYCPY-NKCNIKVPSQVKTSNVRFNNIRGTS 198
N+ +V NPI+IDQ YC N+C + S V+ S + + NI GT+
Sbjct: 319 WQGGSGFVRAVRYQNVRMEDVANPILIDQFYCDSPNECKNQT-SAVQISQIMYRNISGTT 377
Query: 199 ----------ANKIPCQNIGIGNIN 213
++ PC NI + NIN
Sbjct: 378 KSAKAMKFACSDSFPCNNIVVSNIN 402
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL--SIRF 50
+ NV FGA DG+ DD++AF +AW +AC+ KS +LVP G+ YL + RF
Sbjct: 62 LVNVDAFGAAGDGVADDTQAFLSAWDKACS--TPKSVLLVPQGRSYLVNATRF 112
>gi|116792819|gb|ABK26513.1| unknown [Picea sitchensis]
gi|148907395|gb|ABR16831.1| unknown [Picea sitchensis]
Length = 429
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 129/301 (42%), Gaps = 72/301 (23%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF-LNDSTITGI 61
NV+ GI D S E W +C+ D + VP L N L D T
Sbjct: 134 NVQGLTIHGGGIIDGSG--EKWWAGSCSRDTSHRCLNVPTAFVLYSSSNVHLRDLTFQ-- 189
Query: 62 KSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
+S H+ I ++++ +L+I A DSPNT+GIH+ S I + IATGDDC+S
Sbjct: 190 ---NSPKIHVQIALSTHVQVENLQIVAPGDSPNTDGIHLSISEHVMIQNCTIATGDDCIS 246
Query: 122 L----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------ 153
+ GHGIS+GSLGK + V + V + +GT
Sbjct: 247 IVAESSNIQISELICGPGHGISIGSLGKYNTKDTVSDVVVNGASLSGTQNGLRIKTWQGG 306
Query: 154 ----------NIVTNNVENPIVIDQLYC---------PYNKCNIKVPSQVKTSNVRFNNI 194
++ NV NPI+I+Q YC P CN + S V+ +NV + +I
Sbjct: 307 SGYAQGIIFQHVKMINVSNPIIINQNYCAPSSSCQNQPTTICNNQ-SSAVQVNNVTYTDI 365
Query: 195 RGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQI 244
GTSA + PC NI + +I+ + G +SL +NV+ + G+
Sbjct: 366 TGTSATQDAIKLACSATAPCTNIVLEDISLQLS------NGDTASSLSANVQGSSNGQVA 419
Query: 245 P 245
P
Sbjct: 420 P 420
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNF 52
VF+V +GA +G+ DDS+AF AW AC S LVP GK YL NF
Sbjct: 44 VFSVDSYGAKGNGVSDDSQAFLAAWNAACT-SSSDSIFLVPHGKTYLVKPINF 95
>gi|89145870|gb|ABD62085.1| polygalacturonase precursor [Glycine max]
Length = 338
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + ++++ I++ DSPNT+GIH
Sbjct: 81 MPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIH 140
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 141 LQNSKDVLIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNI 200
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + VE PIVIDQ YC C +
Sbjct: 201 TVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQT- 259
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V + + + IRGT ++ +PC ++ + ++
Sbjct: 260 SAVSLAGINYERIRGTYTVKPVHFACSDSLPCVDVSLTSV 299
>gi|359488687|ref|XP_003633802.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
gi|296087645|emb|CBI34901.3| unnamed protein product [Vitis vinifera]
Length = 483
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C ++++ + +++ DSPNT+GIH
Sbjct: 214 MPSTKPTALRFYGSSVVTVTGITIQNSPQTHLKFDDCTGVQVSGVTVSSPGDSPNTDGIH 273
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I + +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 274 LQNSQNVVIYSTNLACGDDCVSIQTGCSNIFVHNVNCGPGHGISIGGLGRDNTKACVKNV 333
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T NI + V+ PI+IDQ YC ++C +
Sbjct: 334 TVRDITMQDTMTGVRIKTWQGGSGSVSGVMFSNIQVSRVKTPIMIDQFYCDKSRCQNETK 393
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
+ V S++ + NIRGT ++ +PC + + I
Sbjct: 394 A-VAVSDINYVNIRGTYTVNPVHFACSDSLPCSGVTLTTIQ 433
>gi|356526789|ref|XP_003531999.1| PREDICTED: polygalacturonase At1g48100 isoform 1 [Glycine max]
Length = 538
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 104/220 (47%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + ++++ I++ DSPNT+GIH
Sbjct: 269 MPSVKPTALRFYGSFNPTVTGITIQNSPQCHLKFDSCNGVMVHNVTISSPGDSPNTDGIH 328
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 329 LQNSKDVLIYGSTMACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNI 388
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + VE PIVIDQ YC C +
Sbjct: 389 TVRDVNMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKRTCKNQT- 447
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V + + + IRGT ++ +PC ++ + ++
Sbjct: 448 SAVSLAGINYERIRGTYTVKPVHFACSDSLPCVDVSLTSV 487
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV DFGA DG DD+KAF+ AW EAC ++S+ ++ P Y+
Sbjct: 121 TFNVLDFGAKGDGKSDDTKAFQEAWAEACK---VESSTMLVPADYV 163
>gi|357128137|ref|XP_003565732.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 653
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 39/188 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+RF N+ T+ G++ +S FH+ GC ++++ L I++ A SPNT+G+H+ +++ +
Sbjct: 379 VRFFASNNVTVQGLRIENSPQFHLKFDGCEQVRIDGLFISSPALSPNTDGVHVENTSSVQ 438
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S I GDDC+S+ GHGIS+GSLG V +TVRN
Sbjct: 439 IYNSRINNGDDCISIGAGCSGVHIENVTCGHGHGISIGSLGVRNTRACVSNVTVRNARIL 498
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G + NV N IVIDQ YC C + S V+ + V
Sbjct: 499 DSDNGVRIKTWQGGAGSVSAVEFVGVRMENVRNCIVIDQYYCTGGGCANQT-SAVRVAGV 557
Query: 190 RFNNIRGT 197
+ +IRGT
Sbjct: 558 TYRDIRGT 565
>gi|357135651|ref|XP_003569422.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 544
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 94/196 (47%), Gaps = 39/196 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + + GI V+S H+ C + ++DL I++ +S NT+GIH
Sbjct: 274 MPQVKPTALRFYGSFNVVVAGITIVNSSQCHLKFDNCQGVLVHDLTISSPENSLNTDGIH 333
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDC+S+ GHGIS+G LG+ V +
Sbjct: 334 LQNSKDVSIHHTNLACGDDCISIQTGCSNIYIHNVNCGPGHGISIGGLGRDNTKACVSNV 393
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI + V+ PI+IDQ YC C +
Sbjct: 394 TVRDVNMFRTMTGVRIKTWQGGIGLVQDVRFSNIQVSEVQTPIMIDQFYCDKRTCTNQT- 452
Query: 182 SQVKTSNVRFNNIRGT 197
S V S V++ NIRGT
Sbjct: 453 SAVAVSGVQYENIRGT 468
>gi|242053753|ref|XP_002456022.1| hypothetical protein SORBIDRAFT_03g029030 [Sorghum bicolor]
gi|241927997|gb|EES01142.1| hypothetical protein SORBIDRAFT_03g029030 [Sorghum bicolor]
Length = 532
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + + GI V+S H+ C + ++D+ I++ +S NT+GIH
Sbjct: 262 MPQIKPTALRFYGSFNVVVAGITIVNSSQCHLKFDNCQGVMVHDVTISSPENSLNTDGIH 321
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H+ +A GDDC+S+ GHGIS+G LG+ V +
Sbjct: 322 LQNSKDVSIHHTNLACGDDCISIQTGCSNINIHNVNCGPGHGISIGGLGRDNTKACVSNV 381
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + V+ PI+IDQ YC + C +
Sbjct: 382 TVRDVNMFRTMNGVRIKTWQGGVGLVQDIRFSNIQVSEVQTPIIIDQFYCDRSTCRNQT- 440
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S V++ NIRGT ++ +PC I + +
Sbjct: 441 SAVAVSGVQYENIRGTFTIKPVHFACSDSLPCSGISLTGVQ 481
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VFNV DFGA DG+ DD+KAFE AW ACN S VLVPP
Sbjct: 133 VFNVVDFGAKGDGVTDDTKAFEGAWAAACNQGA--STVLVPP 172
>gi|240254055|ref|NP_563875.6| Pectin lyase-like protein [Arabidopsis thaliana]
gi|332190491|gb|AEE28612.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 532
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF+ +TGI +S H+ C + ++D+ +++ DSPNT+GIH
Sbjct: 263 MPSIKPTALRFSGSFGVEVTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIH 322
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ ++ I + +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 323 LQNTKDVLIHSTTLACGDDCISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNI 382
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI N V+ PI I+Q YC ++KC +
Sbjct: 383 TVRDVAMHNTMTGVRIKTWQGGVGSVKGIIFSNIQLNQVQIPITINQFYCDHSKCKNQT- 441
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNIN 213
S V V + I+GT K PC ++ + +I
Sbjct: 442 SAVAVEGVTYERIKGTYTVKPVHFACSDNFPCVDVQLSSIE 482
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP------------GKYLSI 48
VFNV DFGA DG DD+KAFE AW AC + S +LVPP G Y
Sbjct: 118 VFNVMDFGAKGDGKCDDTKAFEAAWVAACKIEA--SVMLVPPEYTYLVGPISFSGPYCQA 175
Query: 49 RFNFLNDSTITGIKSVDSRYFHINILGCYNL-KLNDLKI 86
F D TI I DS+ + ++ + KL +K+
Sbjct: 176 NIVFQLDGTI--IAPTDSKTWGKGLMWWIDFTKLKGIKV 212
>gi|108864194|gb|ABA92372.2| Polygalacturonase family protein, expressed [Oryza sativa Japonica
Group]
Length = 347
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 88/213 (41%), Gaps = 47/213 (22%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
VF D +VA G D A R A D PP S+ + + G
Sbjct: 118 VFQDVDGVSVAGGTLDGRGRALWACRRARRPD-------CPPATR-SLTIYRSRNVAVRG 169
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
+ S DS HI + + + D ++A SPNT+GIHI S G + ++VI TGDDCV
Sbjct: 170 LTSRDSAGIHITVQASAGVAIVDTVVSAPGRSPNTDGIHIKQSTGVTVRNAVIGTGDDCV 229
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN---------- 154
S+ GHGIS+GSLG V +TV+ GT
Sbjct: 230 SMVEGSSDVLIEAVTCGPGHGISIGSLGDTPEQVAVRNITVKGAALAGTTNGLRIKTWAK 289
Query: 155 -------------IVTNNVENPIVIDQLYCPYN 174
+V NV NPI++DQ YCP N
Sbjct: 290 ANAGAVAGVSFSGVVMRNVSNPIIVDQNYCPGN 322
>gi|302784710|ref|XP_002974127.1| hypothetical protein SELMODRAFT_12908 [Selaginella moellendorffii]
gi|300158459|gb|EFJ25082.1| hypothetical protein SELMODRAFT_12908 [Selaginella moellendorffii]
Length = 376
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 117/276 (42%), Gaps = 59/276 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W AC ++ P SI FN + + + G++ V+S H+N GC ++ L
Sbjct: 109 WSRACKPTAGSTSCRKAP---TSIEFNTVKNLRVNGLEVVNSPRMHVNFNGCQHVAAQWL 165
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHG---ISVGSL--GKG----- 134
+I + +SPNT+GIHI +S I + ++A GDDCVS+ G I V S+ G G
Sbjct: 166 RINSPGNSPNTDGIHITNSQDVVIKYVMVAAGDDCVSIVGGSSNIDVSSIVCGPGHGISI 225
Query: 135 ---INDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVIDQL 169
+ V G+ VRN GT ++ + V NPI+IDQ
Sbjct: 226 GSLGGGDVVSGVRVRNANLIGTTNGVRIKSYKNGHGTVSDVSFEDVRMDEVANPIIIDQA 285
Query: 170 YCPYNK--CNIKVPSQ----VKTSNVRFNNIRGTSANK----------IPCQNIGIGNIN 213
YC ++ C + ++ V S VR+ NI GTS K + C I + N+
Sbjct: 286 YCDAHEHDCGAEAAAEEVSGVSISGVRYKNISGTSKTKTAITLRCSQVVGCDGIELDNVE 345
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ + G + CSN P +C+
Sbjct: 346 -----ITQAINGANADARCSNAYGVAGKNVFPESCL 376
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
FN++D+GA DG+ DD++A E AW++AC + +L+P GK I
Sbjct: 3 FNLQDYGAKGDGVTDDTQALERAWQDACK--SPDATLLIPGGKTFLI 47
>gi|302770853|ref|XP_002968845.1| hypothetical protein SELMODRAFT_12909 [Selaginella moellendorffii]
gi|300163350|gb|EFJ29961.1| hypothetical protein SELMODRAFT_12909 [Selaginella moellendorffii]
Length = 376
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 118/276 (42%), Gaps = 59/276 (21%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W AC ++ P SI FN + + + G++ V+S H+N GC ++ L
Sbjct: 109 WSRACKPTPGSTSCRKAP---TSIEFNTVKNLRVNGLEVVNSPRMHVNFNGCQHVAAQWL 165
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHG---ISVGSL--GKG----- 134
+I + +SPNT+GIHI +S I ++++A GDDCVS+ G I V S+ G G
Sbjct: 166 RINSPGNSPNTDGIHITNSQDVVIKYAMVAAGDDCVSIVGGSSNIDVSSIVCGPGHGISI 225
Query: 135 ---INDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVIDQL 169
+ V G+ VRN GT ++ + V NPI+IDQ
Sbjct: 226 GSLGGGDVVSGVRVRNANLIGTTNGVRIKSYKNGHGAVSDVSFEDVRMDEVANPIIIDQA 285
Query: 170 YCPYNK--CNIKVPSQ----VKTSNVRFNNIRGTSANK----------IPCQNIGIGNIN 213
YC ++ C + ++ V S VR+ NI GTS K + C I + N+
Sbjct: 286 YCDAHEHDCGAEAAAEEVSGVSISGVRYKNISGTSKTKTAITLRCSQVVGCDGIELDNVE 345
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+ +G + CSN P +C+
Sbjct: 346 -----ITQATKGANADARCSNAYGVAGKNVFPESCL 376
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
FN++D+GA DG+ DD++A E AW++AC + +L+P GK I
Sbjct: 3 FNLQDYGAKGDGVTDDTQALERAWQDACK--SPDATLLIPGGKTFLI 47
>gi|158634620|gb|ABW76153.1| polygalacturonase [Vitis vinifera]
Length = 483
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C ++++ + +++ DSPNT+GIH
Sbjct: 214 MPSTKPTALRFYGSSVVTVTGITIQNSPQTHLKFDDCTGVQVSGVTVSSPGDSPNTDGIH 273
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I + +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 274 LQNSQNVVIYSTNLACGDDCVSIQTGCSNIFVHNVNCGPGHGISIGGLGRDNTKACVENV 333
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T NI + V+ PI+IDQ YC ++C +
Sbjct: 334 TVRDITMQDTMTGVRIKTWQGGSGSVSGVMFSNIQVSRVKTPIMIDQFYCDKSRCQNETK 393
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
+ V S++ + NIRGT + ++PC + + I
Sbjct: 394 A-VAVSDINYVNIRGTYTVNPVHFACSARLPCSGVTLTPIQ 433
>gi|226501014|ref|NP_001150245.1| polygalacturonase precursor [Zea mays]
gi|195637770|gb|ACG38353.1| polygalacturonase precursor [Zea mays]
Length = 437
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 95/223 (42%), Gaps = 51/223 (22%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C + V P YL R L + ++ DS H+ I ++ ++ L
Sbjct: 169 WINSCKLNRSARCVTGPTALYLR-RCTRL---VVEELQVRDSMQMHVAIAYSRDVAVSRL 224
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
ITA A SPNT GIH+ +S IS IATGDDCVS+ GHGIS+
Sbjct: 225 SITAPAWSPNTYGIHVSNSREVSISRCTIATGDDCVSIVTGSTFVRVTSIFCGPGHGISI 284
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
GSLG + V + V T GT +I NV NPI+I
Sbjct: 285 GSLGANNSWAHVSDVLVEKATLLGTTNGVRIKTWQGGYGYAERISFRDISMRNVTNPIII 344
Query: 167 DQLYCPYNKCNIKVPSQ-------VKTSNVRFNNIRGTSANKI 202
DQ YC + PS V N+ + NI GTSA+++
Sbjct: 345 DQNYC--DSARTTTPSSCHDQGSAVAVRNISYRNIHGTSASRV 385
>gi|218185532|gb|EEC67959.1| hypothetical protein OsI_35700 [Oryza sativa Indica Group]
Length = 341
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 95/241 (39%), Gaps = 59/241 (24%)
Query: 68 YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----- 122
+ + + + + D ++A SPNT+GIHI S G + ++VI TGDDCVS+
Sbjct: 99 FVFVMVEASAGVAIVDTVVSAPGRSPNTDGIHIKQSTGVTVRNAVIGTGDDCVSMVEGSS 158
Query: 123 -----------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN----------------- 154
GHGIS+GSLG V +TV+ GT
Sbjct: 159 DVLIEAVTCGPGHGISIGSLGDTPEQVAVRNITVKGAALAGTTNGLRIKTWAKANAGAVT 218
Query: 155 ------IVTNNVENPIVIDQLYCPYNKC---NIKVP------SQVKTSNVRFNNIRGTSA 199
+V NV NPI++DQ YCP N + P S ++ S V + ++ GTSA
Sbjct: 219 GVSFSGVVMRNVSNPIIVDQNYCPGNASCPTEARSPETCDLGSGIEISGVSYTDVEGTSA 278
Query: 200 NKI----------PCQNIGIGNINWVYN-GVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
PC I + ++ Y S C N FG P +C
Sbjct: 279 TATAVRFDCSPSRPCAGIAMRDVRLRYQPPAAAAAAERPAASFCRNAHGVAFGDVDPPSC 338
Query: 249 V 249
+
Sbjct: 339 L 339
>gi|357168192|ref|XP_003581528.1| PREDICTED: polygalacturonase ADPG1-like [Brachypodium distachyon]
Length = 406
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 115/266 (43%), Gaps = 51/266 (19%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
+T W C +G ++V P +++ + ++ + S DS HI + + +
Sbjct: 144 QTWWPRKCKRNG---CLVVAP---TALKLVSCDGLELSYLSSKDSPQMHIVVSTSRGVNM 197
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
L ITA DSPNT+GIH+ S G +I+ S I TGDDCVS+ GHG
Sbjct: 198 THLTITAPGDSPNTDGIHLDRSEGVQITGSTIGTGDDCVSIGSGTRFVTVDGLVCGPGHG 257
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTF----------------------TGTNIVTNNVENP 163
+SVGSLG+ ++ V + VRN F + T+I NV++P
Sbjct: 258 VSVGSLGRKGSNAAVEYIDVRNVHFINTSNGARIKTWLGGQGYARSISFTDIKFTNVDHP 317
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIP----CQNIGIGNINWVYNGV 219
+VI+Q Y I+ V N+ + N+ GTS+ K C G V +
Sbjct: 318 VVINQFYVDR---AIQSMGGVAIRNITYTNLNGTSSQKTAVAFDCSESGSCTGIHVNSMA 374
Query: 220 NVKVEGPETTSLCSNVKPTLFGKQIP 245
+G T + C NV+ G P
Sbjct: 375 ITGTDGQATVARCQNVQGDTSGNVSP 400
Score = 43.9 bits (102), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
F+V +FGA DG DD+KAFE AW C G + + VP +
Sbjct: 35 AFSVVNFGARGDGTTDDTKAFEQAWAATCGARGPSATLHVPANR 78
>gi|224056805|ref|XP_002299032.1| predicted protein [Populus trichocarpa]
gi|222846290|gb|EEE83837.1| predicted protein [Populus trichocarpa]
Length = 469
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 95/204 (46%), Gaps = 48/204 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G+ +S+ H I +++++ + ++A DSPNT+GIHI S + I TGD
Sbjct: 199 VKGLTIKNSQQMHFVISKSASVRISQVSVSAPGDSPNTDGIHITQSTNVVLQDCKIGTGD 258
Query: 118 DCVSL----------------GHGISVGSLGKG---------INDEEVVGLT---VRNCT 149
DC+S+ GHG+S+GSLGK + D + T VR T
Sbjct: 259 DCISIVNGSSGIKMKRIYCGPGHGVSIGSLGKDNSTGIVAKVVLDTAFISETTNGVRIKT 318
Query: 150 FTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS- 198
+ G N+ +NV+NPI+IDQ YC S VK S + + NI GT+
Sbjct: 319 WQGGNGYVRGVRFENVRMDNVDNPIIIDQFYCDSPASCQNKTSAVKISEIMYRNISGTTK 378
Query: 199 ---------ANKIPCQNIGIGNIN 213
++ +PC NI + N+N
Sbjct: 379 SEKAMTFACSDSVPCSNIVLSNVN 402
Score = 41.2 bits (95), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
+ NV FGAV DGI DD++AF AW AC +S LVP
Sbjct: 62 LVNVDSFGAVGDGISDDTQAFVKAWETACA--TPESVFLVP 100
>gi|157165820|gb|ABV24999.1| polygalacturonase 2 [Oncidium Gower Ramsey]
Length = 483
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 99/221 (44%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + + ++ +T+ DSPNT+GIH
Sbjct: 214 MPSIKPTALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTSPGDSPNTDGIH 273
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H ++ GDDCVS+ GHGIS+G LG+ V +
Sbjct: 274 LQNSKDVVIHHCNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLGRDNTKACVSNI 333
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TV++ GT NI + V+ PIVIDQ YC + C +
Sbjct: 334 TVQDVNMYGTMTGVRIKTWQGGSGSVQSIRFSNIRVSEVQTPIVIDQFYCDRSSCKNQT- 392
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNIN 213
+ V S + + +I+GT K PC +I + I
Sbjct: 393 AAVALSGIAYESIKGTYTVKPVHLACSDGTPCSDISLTEIE 433
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+FNV DFGA DG+ DD+KAFE AW AC ++++ + P Y
Sbjct: 88 MFNVPDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTMQIPSDY 129
>gi|326518002|dbj|BAK07253.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 435
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 104/242 (42%), Gaps = 61/242 (25%)
Query: 55 DSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIA 114
D ++ +S DS HI + N+ + L ITA DSPNT+G+HI S+ ++ S I
Sbjct: 168 DVELSQFRSKDSPQMHIAVSMSSNVNVAQLTITAPWDSPNTDGVHIDRSDHVRVTGSTIG 227
Query: 115 TGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF-------- 150
TGDDCVS+ GHG+SVGSLGK V + VRN F
Sbjct: 228 TGDDCVSIGSGTQFVTVDGIVCGPGHGVSVGSLGKKGAAVSVEYIDVRNVQFINTMNGAR 287
Query: 151 --------------TGTNIVTNNVENPIVIDQLYCPYNKCNIKVP---SQVKTSNVRFNN 193
+ T+I NVE+P+VI+Q Y ++ VP V SN+ + N
Sbjct: 288 IKTWQGGKGYAKSISFTDINFTNVEHPVVINQFYVDHH----HVPNNMGAVALSNITYTN 343
Query: 194 IRGTSANKIP----------CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQ 243
+ GTS K C NI + ++ +G T + C NV+ G
Sbjct: 344 LSGTSRRKTAVEFDCSESGSCTNIHVNSV------AITAADGGGTVARCRNVQGDTSGYV 397
Query: 244 IP 245
P
Sbjct: 398 YP 399
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 27/41 (65%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
VFNVKD+GA DG DD+KAF AW AC G + +LVP
Sbjct: 33 VFNVKDYGARGDGTTDDTKAFVDAWTAACRARGSPATLLVP 73
>gi|218199291|gb|EEC81718.1| hypothetical protein OsI_25336 [Oryza sativa Indica Group]
Length = 185
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 84/177 (47%), Gaps = 48/177 (27%)
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
++ L ITA +PNT+GIHI S +++ I TGDDC+S+ GH
Sbjct: 1 MSRLSITAPETAPNTDGIHITRSRDVQVTDCTIKTGDDCMSIEDGTKNLHVKNMVCGPGH 60
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVEN 162
GIS+GSLG ++ V +TV N GT N+V +NV N
Sbjct: 61 GISIGSLGDHNSEAHVNNVTVDNVRLYGTTNGARIKTWQGGKGSAKNIVFQNMVMDNVWN 120
Query: 163 PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGI 209
PI+IDQ YC + + S V+ SN+ F NIRGTSA N +PC I +
Sbjct: 121 PIIIDQNYCDSSTPCKQQKSAVEVSNLLFKNIRGTSASEEAIVLHCSNSVPCHGITL 177
>gi|242063922|ref|XP_002453250.1| hypothetical protein SORBIDRAFT_04g002530 [Sorghum bicolor]
gi|241933081|gb|EES06226.1| hypothetical protein SORBIDRAFT_04g002530 [Sorghum bicolor]
Length = 520
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 55/211 (26%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G++ +++ H+ + +++ L+I A DSPNT+GIH+ S I I TGD
Sbjct: 241 VRGLRVRNAQQMHVTVSRSRGVRVGGLRIDAPEDSPNTDGIHVADSTAVTIQSCRIGTGD 300
Query: 118 DCVSL----------------GHGISVGSLGKG-----INDEEVVGLTVRNC-------T 149
DC+S+ GHGIS+GSLGKG + D + G +R T
Sbjct: 301 DCISIVNGSFGVKMRNIDCGPGHGISIGSLGKGGAFAAVADVALDGARIRRAQNGVRIKT 360
Query: 150 FTG----------TNIVTNNVENPIVIDQLYC-------PYNKCNIKVPSQVKTSNVRFN 192
+ G N+ + V++PIVIDQ YC ++ S V S+V +
Sbjct: 361 WQGGAGYVRGVRFANVDMDGVDHPIVIDQFYCDVPPGGGDRSRTCANQTSAVAVSDVSYR 420
Query: 193 NIRGTS----------ANKIPCQNIGIGNIN 213
NI GTS ++ +PC I + +IN
Sbjct: 421 NITGTSRRAEAIRFACSDAVPCTGIVLRDIN 451
>gi|449434933|ref|XP_004135250.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 530
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 100/221 (45%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + ++D +++ DS NT+GIH
Sbjct: 261 MPRIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVLVHDFNVSSPGDSLNTDGIH 320
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S ++ GDDC+S+ GHGIS+GSLGK V +
Sbjct: 321 LQNSKDVLIYSSTLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKDNTKACVSNI 380
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T T NI + V+ PIVIDQ YC KC+ +
Sbjct: 381 TVRDVTMHNTMNGVRIKTWQGGLGFVQGVLFSNIQVSEVKIPIVIDQFYCDKAKCSNQT- 439
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNIN 213
+ V S + + IRGT K +PC +I + I
Sbjct: 440 AAVALSGINYERIRGTYTVKPVHFACSDNLPCTDISLTAIE 480
Score = 43.9 bits (102), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+FNV DFGA DG DD+KAF+ W +C + ++ + P KY+
Sbjct: 113 MFNVLDFGAKGDGKTDDTKAFQDTWTASCK---VAASTFIVPSKYV 155
>gi|14532456|gb|AAK63956.1| At1g10640/F20B24_8 [Arabidopsis thaliana]
gi|23506077|gb|AAN28898.1| At1g10640/F20B24_8 [Arabidopsis thaliana]
Length = 380
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF+ +TGI +S H+ C + ++D+ +++ DSPNT+GIH
Sbjct: 111 MPSIKPTALRFSGSFGVEVTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIH 170
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ ++ I + +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 171 LQNTKDVLIHSTTLACGDDCISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNI 230
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +NI N V+ PI I+Q YC ++KC +
Sbjct: 231 TVRDVAMHNTMTGVRIKTWQGGVGSVKGIIFSNIQLNQVQIPITINQFYCDHSKCKNQT- 289
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V V + I+GT ++ PC ++ + +I
Sbjct: 290 SAVAVEGVTYERIKGTYTVKPVHFACSDNFPCVDVQLSSIE 330
>gi|414877334|tpg|DAA54465.1| TPA: polygalacturonase [Zea mays]
Length = 502
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 39/188 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ND T+ G++ +S FH+ C ++++ L +++ A SPNT+G+H+ ++ +
Sbjct: 238 IRFFSSNDVTVCGLRIENSPQFHLRFDDCERVRVDGLFVSSPASSPNTDGVHVENTKSVQ 297
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S I GDDCVS+ GHGIS+GSLG V +TVRN
Sbjct: 298 ILNSRIYNGDDCVSIGAGCSDVHVENITCGHGHGISIGSLGVHNTHACVSNVTVRNVRIL 357
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G T + NV+N IVIDQ YC + C + S V+ + V
Sbjct: 358 DSDNGVRIKTWQGGAGAVSAVEFTGVQMQNVKNCIVIDQYYCLGHGCANQT-SAVRVAGV 416
Query: 190 RFNNIRGT 197
+ +I GT
Sbjct: 417 AYRDIHGT 424
>gi|399764488|gb|AFP50444.1| polygalacturonase 11a, partial [Medicago polymorpha]
Length = 152
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G KS V ++++ FNF+N+S + I S DS+ FH+ + GC N+ + IT
Sbjct: 53 AAAWSGKKSNSKV----FMNLCFNFVNNSIVRDITSKDSKNFHVMVFGCNNITFDGFTIT 108
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHG 125
A DSPNT+GIH+G S +I ++ I TGDDCVS+G G
Sbjct: 109 APGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDG 146
>gi|229577245|ref|NP_001132604.2| uncharacterized protein LOC100194076 [Zea mays]
gi|195645302|gb|ACG42119.1| polygalacturonase [Zea mays]
Length = 502
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 39/188 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ND T+ G++ +S FH+ C ++++ L +++ A SPNT+G+H+ ++ +
Sbjct: 238 IRFFSSNDVTVCGLRIENSPQFHLRFDDCERVRVDGLFVSSPASSPNTDGVHVENTKSVQ 297
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S I GDDCVS+ GHGIS+GSLG V +TVRN
Sbjct: 298 ILNSRIYNGDDCVSIGAGCSDVHVENITCGHGHGISIGSLGVHNTHACVSNVTVRNVRIL 357
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G T + NV+N IVIDQ YC + C + S V+ + V
Sbjct: 358 DSDNGVRIKTWQGGAGAVSAVEFTGVQMQNVKNCIVIDQYYCLGHGCANQT-SAVRVAGV 416
Query: 190 RFNNIRGT 197
+ +I GT
Sbjct: 417 AYRDIHGT 424
>gi|223950345|gb|ACN29256.1| unknown [Zea mays]
Length = 332
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 39/188 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ND T+ G++ +S FH+ C ++++ L +++ A SPNT+G+H+ ++ +
Sbjct: 68 IRFFSSNDVTVCGLRIENSPQFHLRFDDCERVRVDGLFVSSPASSPNTDGVHVENTKSVQ 127
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S I GDDCVS+ GHGIS+GSLG V +TVRN
Sbjct: 128 ILNSRIYNGDDCVSIGAGCSDVHVENITCGHGHGISIGSLGVHNTHACVSNVTVRNVRIL 187
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G T + NV+N IVIDQ YC + C + S V+ + V
Sbjct: 188 DSDNGVRIKTWQGGAGAVSAVEFTGVQMQNVKNCIVIDQYYCLGHGCANQT-SAVRVAGV 246
Query: 190 RFNNIRGT 197
+ +I GT
Sbjct: 247 AYRDIHGT 254
>gi|297791315|ref|XP_002863542.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309377|gb|EFH39801.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 346
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 58/231 (25%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+ S+ FN N+ I+GI S DS HI+I C + ++++++ A SPNT+GI I +S
Sbjct: 86 WESLDFNNCNNLKISGITSKDSPRNHISIDSCNIVMISNIQLFAPETSPNTDGIDISTST 145
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
+IS S I TGDDC++L GHGIS+GSLG +V + V +C
Sbjct: 146 NVDISKSTIGTGDDCIALNTGCVNINITEIVCGPGHGISIGSLGANGQVAKVENVQVTHC 205
Query: 149 TFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNI---KVPSQ 183
F T +I + +NPI+IDQ Y + K
Sbjct: 206 IFNKTTNGARIKTCQGGEGYVKHIYFEHITIIDAKNPIIIDQHYVDKGHSSFESNKDSEA 265
Query: 184 VKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVE 224
V S+V+F + GT+ N+ PC+NI V+N +N+ E
Sbjct: 266 VAISDVKFIDFHGTTPNENIITLNCSKIKPCKNI-------VFNDINITTE 309
>gi|6573750|gb|AAF17670.1|AC009398_19 F20B24.8 [Arabidopsis thaliana]
Length = 542
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF+ +TGI +S H+ C + ++D+ +++ DSPNT+GIH+ ++
Sbjct: 279 IALRFSGSFGVEVTGITIQNSPQCHLKFDDCVGVVVHDIAVSSPGDSPNTDGIHLQNTKD 338
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
I + +A GDDC+S+ GHGIS+GSLGK V +TVR+
Sbjct: 339 VLIHSTTLACGDDCISIQTGCSNVFVHNVNCGPGHGISIGSLGKEGTKACVSNITVRDVA 398
Query: 149 ---TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T TG +NI N V+ PI I+Q YC ++KC + S V
Sbjct: 399 MHNTMTGVRIKTWQGGVGSVKGIIFSNIQLNQVQIPITINQFYCDHSKCKNQT-SAVAVE 457
Query: 188 NVRFNNIRGT---------SANKIPCQNIGIGNIN 213
V + I+GT ++ PC ++ + +I
Sbjct: 458 GVTYERIKGTYTVKPVHFACSDNFPCVDVQLSSIE 492
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP------------GKYLSI 48
VFNV DFGA DG DD+KAFE AW AC + S +LVPP G Y
Sbjct: 118 VFNVMDFGAKGDGKCDDTKAFEAAWVAACKIEA--SVMLVPPEYTYLVGPISFSGPYCQA 175
Query: 49 RFNFLNDSTITGIKSVDSRYFHINILGCYNL-KLNDLKI 86
F D TI I DS+ + ++ + KL +K+
Sbjct: 176 NIVFQLDGTI--IAPTDSKTWGKGLMWWIDFTKLKGIKV 212
>gi|356512221|ref|XP_003524819.1| PREDICTED: polygalacturonase At1g48100 [Glycine max]
Length = 490
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 39/195 (20%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
P G IRF ++ + G+K +S FH+ GC + ++ L I++ SPNT+GIH+
Sbjct: 221 PCGSPAMIRFFMSSNLKVNGLKIQNSPQFHMIFNGCQGVLIDKLSISSPKLSPNTDGIHV 280
Query: 101 GSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLT 144
+S I +S+I+ GDDC+S+G HGIS+GSLG + V LT
Sbjct: 281 ENSKYVGIYNSMISNGDDCISIGPGSSNVDIAGLTCGPSHGISIGSLGVHNSQACVSNLT 340
Query: 145 VRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
VR+ T+ G NI NV N I+IDQ YC +C + S
Sbjct: 341 VRDSIIRESDNGLRIKTWQGGMGSVSSLRFENIQMENVGNCIIIDQYYCMSKEC-LNQTS 399
Query: 183 QVKTSNVRFNNIRGT 197
V ++V ++NI+GT
Sbjct: 400 AVHVNDVSYSNIKGT 414
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VF+V+ FGAV DG DD++AF AW+ AC + S V++ P Y+
Sbjct: 94 VFDVRSFGAVGDGCADDTRAFRAAWKAAC---AVDSGVVLAPENYI 136
>gi|302774382|ref|XP_002970608.1| hypothetical protein SELMODRAFT_33909 [Selaginella moellendorffii]
gi|300162124|gb|EFJ28738.1| hypothetical protein SELMODRAFT_33909 [Selaginella moellendorffii]
Length = 357
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 115/255 (45%), Gaps = 48/255 (18%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C D + P ++RF + + GI +S HI ++ D+
Sbjct: 108 WAHSCKKDKSQHCTDAP----TAVRFEDSKNIKVEGITITNSPQIHITFSDSQAIQATDV 163
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
I + SPNT+GIH+ S + + I+ GDDCVS+ GHGIS+
Sbjct: 164 VINSPESSPNTDGIHVSGSTNVVVRDADISAGDDCVSIVSGSSNIQVLGGRCGPGHGISI 223
Query: 129 GSLGKG-----INDEEVVGLT-------VRNCTFTG----------TNIVTNNVENPIVI 166
GSLGKG +++ +V G+ VR T+ G NI +NV+NPI+I
Sbjct: 224 GSLGKGGSYATVSNVQVSGVKIDAATNGVRIKTWQGGKGYVSNVIFENISMDNVKNPIII 283
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----KIPCQNIGI-GNINWVYNGVNV 221
DQ YC C K S + V ++NI GTSA+ + C + G NI++ + +
Sbjct: 284 DQNYCD-GGCGKKRGSSLTIQGVTYSNIVGTSASPDGINLHCSSSGACTNIHFSNVKLTL 342
Query: 222 KVEGPETTSLCSNVK 236
G ++C NV+
Sbjct: 343 GSSGKAAGAVCENVQ 357
Score = 43.5 bits (101), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP---PGKYLS 47
FNVK++GAV DG DD++AF A+ AC G + +LVP G YLS
Sbjct: 1 FNVKNYGAVGDGKHDDAQAFLDAYNAACQ-AGDNAVILVPSTSAGYYLS 48
>gi|413935441|gb|AFW69992.1| hypothetical protein ZEAMMB73_828266 [Zea mays]
Length = 516
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 57/213 (26%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G++ +++ H+ + +++ L+I A DSPNT+GIH+ S I I TGD
Sbjct: 239 VRGLRVQNAQQMHVTVSRSRGVRVAGLRIDAPEDSPNTDGIHVAESTAVTIQSCRIGTGD 298
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLT------------VRNCT 149
DC+S+ GHGIS+GSLGKG V + VR T
Sbjct: 299 DCISIVNGSFGVKMRDIDCGPGHGISIGSLGKGGAFAAVADVALDRARISRAQNGVRIKT 358
Query: 150 FTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKV---------PSQVKTSNVR 190
+ G ++ + V++PIVIDQ YC + S V S+V
Sbjct: 359 WQGGAGYVRGVRFADVAVDGVDHPIVIDQFYCDVTRRQRDGGGGGACANQTSAVAVSDVS 418
Query: 191 FNNIRGTS----------ANKIPCQNIGIGNIN 213
+ NI GTS ++ +PC I + NIN
Sbjct: 419 YRNISGTSRRAEAIRFACSDAVPCTGIVLSNIN 451
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
V NV FGA DG+ DD++AF +AW+ AC+ D + LVP G+ +
Sbjct: 101 VVNVDSFGAAGDGVADDTQAFASAWKTACSLD--NAVFLVPAGRRYKV 146
>gi|356524988|ref|XP_003531109.1| PREDICTED: polygalacturonase At1g48100-like [Glycine max]
Length = 484
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 96/195 (49%), Gaps = 39/195 (20%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
P G IRF ++ + G+K +S FH+ GC + ++ L I++ SPNT+GIH+
Sbjct: 215 PCGSPAMIRFFMSSNLKVKGLKIQNSPQFHMIFNGCQGVLIDKLSISSPKLSPNTDGIHV 274
Query: 101 GSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLT 144
+S I +S+I+ GDDC+S+G HGIS+GSLG + V LT
Sbjct: 275 ENSKYVGIYNSMISNGDDCISIGPGSSNVDIAGLTCGPSHGISIGSLGVHNSQACVSNLT 334
Query: 145 VRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPS 182
VR+ T+ G NI NV N I+IDQ YC +C + S
Sbjct: 335 VRDSIIRESDNGLRIKTWQGGMGSVSSLRFENIQMENVGNCIIIDQYYCLSKEC-LNQTS 393
Query: 183 QVKTSNVRFNNIRGT 197
V ++V ++NI+GT
Sbjct: 394 AVHVNDVSYSNIKGT 408
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VF+V+ FGAV DG DD++AF AW+ AC + S +++ P Y
Sbjct: 88 VFDVRSFGAVGDGCADDTRAFRAAWKAAC---AVDSGIVLAPENY 129
>gi|297841803|ref|XP_002888783.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334624|gb|EFH65042.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 465
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 50/209 (23%)
Query: 65 DSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL-- 122
+S+ H+ I ++++ + +T+ DSPNT+GIHI +S + S I+TGDDCVS+
Sbjct: 207 NSQQMHLIIARSNTVRISRVMVTSPGDSPNTDGIHITASTDVVVQDSKISTGDDCVSIVN 266
Query: 123 --------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT--------------- 153
GHGIS+GSLG+G + V + + T
Sbjct: 267 GSAKIKMKRIYCGPGHGISIGSLGQGHSTGTVTAVVLDTAFLKNTTNGLRIKTWQGGNGY 326
Query: 154 -------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS-------- 198
N+V +V NPI+IDQ YC S V S + + NI GT+
Sbjct: 327 VKGVRFENVVMQDVANPIIIDQFYCDSPSTCQNQTSAVHISEIMYRNITGTTKSAKAIKF 386
Query: 199 --ANKIPCQNIGIGNINWVYNGVNVKVEG 225
++ +PC +I + N+N G + KVE
Sbjct: 387 ACSDAVPCSHIVLNNVN--LEGNDGKVEA 413
Score = 43.5 bits (101), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL 46
+ NV FGA DG+ DD++AF +AW AC+ S +LVP G+ YL
Sbjct: 63 LVNVDSFGAAGDGVSDDTQAFISAWTMACS--APNSVLLVPQGRSYL 107
>gi|317106729|dbj|BAJ53225.1| JHL06P13.4 [Jatropha curcas]
Length = 380
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 105/232 (45%), Gaps = 41/232 (17%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
F+ D + GI + S HI I GC N+ L L I A A SPNT+G S + +
Sbjct: 151 FSNCTDVHMRGINTARSGGGHIFIFGCENVDLAFLNIQAPATSPNTDGDDCISM--VDRT 208
Query: 110 HSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT---------------- 153
++V T DC GHGIS+GSLG +V +T+R+ F GT
Sbjct: 209 YNVNITNVDC-GPGHGISIGSLGANGEVVDVQNITIRDINFYGTTNGARIKTCRAGRGRV 267
Query: 154 ------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK------ 201
NI V+NPI+IDQ Y + K+ + V S+V+F GTS +K
Sbjct: 268 QDVYFYNINVTEVKNPIIIDQHYGEKKSHSTKMRAGVHISDVQFFGFFGTSKSKVAIDLN 327
Query: 202 ----IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+PC N+ +GNI E E TS C+N + +G P +C+
Sbjct: 328 CSENVPCTNLSLGNIRL------GPAESGEVTSTCNNAFGSTYGVVRPKSCL 373
>gi|168032270|ref|XP_001768642.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680141|gb|EDQ66580.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 424
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 107/266 (40%), Gaps = 64/266 (24%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK--------YLSIRFNFLN 54
N++DF V +G+ + W + C + GK + + F
Sbjct: 110 NLRDFALVGNGVINGKG--RRWWSQVCR------PTMKVSGKTWCRNRKEFYGLVFQNCV 161
Query: 55 DSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIA 114
+ ++ ++ DS FH+ C ++ L ITA +SPNT+GIH+ I + I
Sbjct: 162 NVRVSNLRIRDSPKFHLTFTNCDGVRATGLLITAPRNSPNTDGIHLKDCQNVFILNCRIR 221
Query: 115 TGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----- 153
TGDDCVS+ GHGISVGSLGK + V G+ V TF T
Sbjct: 222 TGDDCVSIQTGSSLVLIEDIECGPGHGISVGSLGKSRSKACVWGIKVDRATFDRTTNGFR 281
Query: 154 -----------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRG 196
N N VE P+VIDQ YC S V S + NI G
Sbjct: 282 IKSWQGGSGHAHGIMFLNAKMNKVEKPVVIDQYYCDSATPCANETSAVAISEIIIANITG 341
Query: 197 TSAN----------KIPCQNIGIGNI 212
S++ +PC+N+ + NI
Sbjct: 342 RSSSMMAVDIKCSEHVPCRNVVLQNI 367
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSA-VLVPPGKYLSIR 49
VFNV GAV DG DD +AF+ AW AC I SA VLVP G+ S+R
Sbjct: 23 VFNVMMEGAVGDGRTDDGEAFQRAWLHACR---IPSAVVLVPAGRKFSLR 69
>gi|242096358|ref|XP_002438669.1| hypothetical protein SORBIDRAFT_10g024000 [Sorghum bicolor]
gi|241916892|gb|EER90036.1| hypothetical protein SORBIDRAFT_10g024000 [Sorghum bicolor]
Length = 195
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 87/192 (45%), Gaps = 55/192 (28%)
Query: 100 IGSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGL 143
+G S+G I ++VI GDDC+S+G HGIS+GSLG+ ++++V +
Sbjct: 1 MGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDI 60
Query: 144 TVRNCTFTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIK 179
V++CT T NI + NPI+ID YCP C
Sbjct: 61 NVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTAS 120
Query: 180 VPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETT 229
S+V +V F N+ GTSA +KIPC + + N+ Y+G N K T
Sbjct: 121 GASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNK-----TM 175
Query: 230 SLCSNVKPTLFG 241
++C N K + G
Sbjct: 176 AVCQNAKGSATG 187
>gi|13958032|gb|AAK50769.1|AF361321_1 polygalacturonase [Pisum sativum]
Length = 355
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 98/220 (44%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF T+TGI +S H+ C + ++D+ I++ DSPNT+GIH
Sbjct: 86 MPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDSCNRVLVHDVSISSPGDSPNTDGIH 145
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 146 LQNSKDVLIYSSKLACGDDCISIQTGCSNVYVHNVDCGPGHGISIGSLGKDNTRACVSNI 205
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI V+ PIVIDQ YC C
Sbjct: 206 TVRDVNIHNSMNGVRIKTWQGGSGSVQGVLFSNIQVTEVQLPIVIDQFYCDKRTCTNHT- 264
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V + + I+GT ++ PC ++ + +
Sbjct: 265 SAVSLEGINYERIKGTYTVKPVHFACSDSFPCVDVSLATV 304
>gi|307135969|gb|ADN33828.1| polygalacturonase [Cucumis melo subsp. melo]
Length = 530
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + ++D +++ DS NT+GIH
Sbjct: 261 MPRIKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCIGVLVHDFNVSSPGDSLNTDGIH 320
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S ++ GDDC+S+ GHGIS+GSLGK V +
Sbjct: 321 LQNSKDVLIYSSTLSCGDDCISIQTGCSNVYIHNVNCGPGHGISIGSLGKDNTKACVSNI 380
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + V+ PIVIDQ YC KC+ +
Sbjct: 381 TVRDVIMHNTMNGVRIKTWQGGLGFVQGVLFSNIQVSEVKIPIVIDQFYCDKAKCSNQT- 439
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNIN 213
S V S + + IRGT K +PC +I + I
Sbjct: 440 SAVALSGINYERIRGTYTVKPVHFACSDNLPCTDISLTAIE 480
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
+FNV DFGA DG DD+KAF+ W +C + ++ + P KY+ +
Sbjct: 113 MFNVLDFGAKGDGKTDDTKAFQDTWTASCK---VAASTFIVPSKYVFL 157
>gi|224130352|ref|XP_002328587.1| predicted protein [Populus trichocarpa]
gi|222838569|gb|EEE76934.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 94/206 (45%), Gaps = 52/206 (25%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I G+ +S+ H I +++++D+ ++A DSPNT+GIHI S + I TGD
Sbjct: 200 INGLTIQNSQQMHFVISHSDSVRVSDVLVSAPEDSPNTDGIHITGSTNVVLQDCKIGTGD 259
Query: 118 DCVSL----------------GHGISVGSLGK--------------GINDEEVVGLTVRN 147
DCVS+ GHGIS+GSLGK E GL ++
Sbjct: 260 DCVSIVNGSSNIKMKRIFCGPGHGISIGSLGKDNSTGMVTKVVLDTAFLRETTNGLRIK- 318
Query: 148 CTFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT 197
T+ G N+ NV NP++IDQ YC K S V+ S + + NI GT
Sbjct: 319 -TWQGGHGYVRGVRFENVGMENVANPVIIDQFYCDSPKTCHNQTSAVEISEITYRNISGT 377
Query: 198 S----------ANKIPCQNIGIGNIN 213
+ ++ +PC NI + NIN
Sbjct: 378 TKSSKAMKFACSDTVPCSNIVLSNIN 403
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
+ NV FGA+ DG+ DD++AFE AW AC KS LVPPG++ +
Sbjct: 63 LVNVDSFGAIGDGVSDDTQAFEKAWNTACTTP--KSVFLVPPGRHYMV 108
>gi|302759450|ref|XP_002963148.1| hypothetical protein SELMODRAFT_78038 [Selaginella moellendorffii]
gi|300170009|gb|EFJ36611.1| hypothetical protein SELMODRAFT_78038 [Selaginella moellendorffii]
Length = 455
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 100/219 (45%), Gaps = 49/219 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++RF ++ + + V+S H+ C + +N++ I++ SPNT+GIH+
Sbjct: 188 PAPAQAVRFYGSSNVVVQHLAIVNSPQTHLKFDSCQGVVVNNVTISSPYTSPNTDGIHLQ 247
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT- 144
+ + + S ++TGDDCVS+ GHGIS+G LG+G V ++
Sbjct: 248 DTRYAAVRSSRVSTGDDCVSIQTGCSNIEIFDMMCGPGHGISIGGLGRGGTKACVSDVSV 307
Query: 145 -----------VRNCTFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQ 183
VR T+ G NI NV NPIVIDQ YC C+ + S
Sbjct: 308 HDVVVHTSQNGVRIKTWQGGSGSVSSVHFHNIAVLNVSNPIVIDQFYCDGRSCHNQT-SG 366
Query: 184 VKTSNVRFNNIRGTSANK----------IPCQNIGIGNI 212
V S+V + NIRGT K +PC I + N+
Sbjct: 367 VSISDVSYKNIRGTYTQKSNIHFACSDSVPCVGIVVANV 405
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+++V FGA DG+ DD+ AF AW +AC ++S+++ P ++
Sbjct: 69 IYDVLSFGAKGDGVTDDTHAFLAAWNQACK---VESSMVEVPANFV 111
>gi|357485855|ref|XP_003613215.1| Polygalacturonase [Medicago truncatula]
gi|355514550|gb|AES96173.1| Polygalacturonase [Medicago truncatula]
Length = 543
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 101/220 (45%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF T+TGI +S H+ C + ++D+ I++ DSPNT+GIH
Sbjct: 274 MPSNKPTALRFYGSYGPTVTGITIQNSPQCHLKFDNCNGVLVHDVSISSPGDSPNTDGIH 333
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDC+S+ GHGIS+GSLGK V +
Sbjct: 334 LQNSKDVLIHSSKLACGDDCISIQTGCSNVYVHNVNCGPGHGISIGSLGKDNTRACVSNI 393
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + V+ PIVIDQ YC C
Sbjct: 394 TVRDVNIHDSMNGVRIKTWQGGSGSVQGVLFSNIQVSEVQLPIVIDQFYCDKRVCTNHT- 452
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V + + + I+GT ++ +PC ++ + +
Sbjct: 453 SAVSLAGINYERIKGTYTVKPVHFACSDSLPCVDVSLTTV 492
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV D+GA DG DD+KAF+ W C ++++ +V P Y+
Sbjct: 121 FNVLDYGAKGDGNTDDTKAFQATWAATCK---VEASTMVIPANYI 162
>gi|357454641|ref|XP_003597601.1| Polygalacturonase [Medicago truncatula]
gi|355486649|gb|AES67852.1| Polygalacturonase [Medicago truncatula]
Length = 362
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 87/199 (43%), Gaps = 67/199 (33%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
F FLN+S I GI S DS+YFH+N+ GC NL D TA A ++ I I +
Sbjct: 148 FYFLNNSIIKGITSKDSKYFHVNVFGCKNLTFMDFSATAPATRDGSKQITILN------- 200
Query: 110 HSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT---------------- 153
+ G GHGISVGSLGK N+E + +TVRNCT T
Sbjct: 201 ---VTCGP-----GHGISVGSLGKYSNEEPLEYITVRNCTLRNTDNGLRIKTWPTTPITY 252
Query: 154 ---------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK--- 201
NI+ +NV NP++I + V F +I GTSA +
Sbjct: 253 DLVSNLHFENIIMDNVSNPVII-----------------IDQDKVTFKDITGTSATQNGV 295
Query: 202 -------IPCQNIGIGNIN 213
+PC+ + + NI+
Sbjct: 296 VLICSSGVPCEEVVLSNID 314
>gi|125553174|gb|EAY98883.1| hypothetical protein OsI_20839 [Oryza sativa Indica Group]
Length = 439
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 56/253 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F ++ GI +S+ H+ C ++K N L+IT+ DSP+T G+H+ SS
Sbjct: 162 ALHFEDCQGISVMGITLQNSQESHLTFTRCSHVKANYLRITSPEDSPDTTGVHVVSSRNV 221
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT------ 144
I I+TG DCVS+ GHGIS+G LG+ + V +
Sbjct: 222 HIMDDSISTGHDCVSIVGNSTDVRLRAISCGPGHGISIGGLGENRSYHRVEKIKMDTLFI 281
Query: 145 ------VRNCTFTG----------TNIVTNNVENPIVIDQLYCPYNK--CNIKVPSQVKT 186
VR TF G +I+ NV+NPIVIDQ N+ C K S V
Sbjct: 282 SNTENGVRVKTFQGGCGTARKMKFGDILMKNVKNPIVIDQQNSSSNEIPCGSKNGSAVTV 341
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+ + +I GTSA++ PC + + N+N G G ++ C +
Sbjct: 342 GEISYTDITGTSASERAVTFACSEAAPCSKLSLENVNITMAG------GQNASAYCHHAF 395
Query: 237 PTLFGKQIPATCV 249
G +P +C+
Sbjct: 396 GKSVGVVVPDSCL 408
>gi|115465199|ref|NP_001056199.1| Os05g0542900 [Oryza sativa Japonica Group]
gi|52353425|gb|AAU43993.1| unknown protein [Oryza sativa Japonica Group]
gi|113579750|dbj|BAF18113.1| Os05g0542900 [Oryza sativa Japonica Group]
gi|215736855|dbj|BAG95784.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 56/253 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F ++ GI +S+ H+ C ++K N L+IT+ DSP+T G+H+ SS
Sbjct: 168 ALHFEDCQGISVMGITLQNSQESHLTFTRCSHVKANYLRITSPEDSPDTTGVHVVSSRNV 227
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT------ 144
I I+TG DCVS+ GHGIS+G LG+ + V +
Sbjct: 228 HIMDDSISTGHDCVSIVGNSTDVRLRAISCGPGHGISIGGLGENRSYHRVEKIKMDTLFI 287
Query: 145 ------VRNCTFTG----------TNIVTNNVENPIVIDQLYCPYNK--CNIKVPSQVKT 186
VR TF G +I+ NV+NPIVIDQ N+ C K S V
Sbjct: 288 SNTENGVRVKTFQGGCGTARKMKFGDILMKNVKNPIVIDQQNSSSNEIPCGSKNGSAVTV 347
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+ + +I GTSA++ PC + + N+N G G ++ C +
Sbjct: 348 GEISYTDITGTSASERAVTFACSEAAPCSKLSLENVNITMAG------GQNASAYCHHAF 401
Query: 237 PTLFGKQIPATCV 249
G +P +C+
Sbjct: 402 GKSVGVVVPDSCL 414
>gi|222632422|gb|EEE64554.1| hypothetical protein OsJ_19406 [Oryza sativa Japonica Group]
Length = 445
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 56/253 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F ++ GI +S+ H+ C ++K N L+IT+ DSP+T G+H+ SS
Sbjct: 168 ALHFEDCQGISVMGITLQNSQESHLTFTRCSHVKANYLRITSPEDSPDTTGVHVVSSRNV 227
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT------ 144
I I+TG DCVS+ GHGIS+G LG+ + V +
Sbjct: 228 HIMDDSISTGHDCVSIVGNSTDVRLRAISCGPGHGISIGGLGENRSYHRVEKIKMDTLFI 287
Query: 145 ------VRNCTFTG----------TNIVTNNVENPIVIDQLYCPYNK--CNIKVPSQVKT 186
VR TF G +I+ NV+NPIVIDQ N+ C K S V
Sbjct: 288 SNTENGVRVKTFQGGCGTARKMKFGDILMKNVKNPIVIDQQNSSSNEIPCGSKNGSAVTV 347
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+ + +I GTSA++ PC + + N+N G G ++ C +
Sbjct: 348 GEISYTDITGTSASERAVTFACSEAAPCSKLSLENVNITMAG------GQNASAYCHHAF 401
Query: 237 PTLFGKQIPATCV 249
G +P +C+
Sbjct: 402 GKSVGVVVPDSCL 414
>gi|449469286|ref|XP_004152352.1| PREDICTED: probable polygalacturonase At3g15720-like [Cucumis
sativus]
Length = 415
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 49/208 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
++G+ +S H++I+ C + ++ L I A +SPNT+GI + S+ +I + I TGD
Sbjct: 178 LSGLTHSNSPQSHMHIVRCNHASISKLNIVAPENSPNTDGIDVAHSSHVKIHNCNIGTGD 237
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+++ GHGIS+GSLGK V + V+NC GT
Sbjct: 238 DCIAISEGTSNIHIANIQCGPGHGISIGSLGKDGTSSSVEDVRVQNCHLKGTMYGARIKT 297
Query: 154 --------------NIVTNNVENPIVIDQLYC-PYNKCNIKVPSQVKTSNVRFNNIRGTS 198
I + V PI+IDQ YC C + S V+ S+V + + GTS
Sbjct: 298 WQGGAGYARKISFQGITLDQVHKPILIDQYYCNGKTDCKNQQTSAVEVSDVLYQGLHGTS 357
Query: 199 ANKIP----------CQNIGIGNINWVY 216
A ++ C+NI + +I+ Y
Sbjct: 358 ATEVAVELSCSETVGCRNIVLEDIDIRY 385
>gi|157165822|gb|ABV25000.1| polygalacturonase 3 [Oncidium Gower Ramsey]
Length = 483
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + + ++ +T+ DS NT+GIH
Sbjct: 214 MPSIKPTALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTSPGDSLNTDGIH 273
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H ++ GDDCVS+ GHGIS+G LG+ V +
Sbjct: 274 LQNSKDVVIHHRNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLGRDNTKACVSNI 333
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ GT NI + V+ PIVIDQ YC + C +
Sbjct: 334 TVRDVNMYGTMTGVRIKTWQGGSGSVQSIRFSNIRVSEVQTPIVIDQFYCDRSSCKNQT- 392
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNI 212
+ V S + + +I+GT K PC +I + I
Sbjct: 393 AAVALSGIAYESIKGTYTVKPVHLACSDGTPCSDISLTEI 432
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+FNV DFGA DG+ DD+KAFE AW AC ++++ + P Y
Sbjct: 88 MFNVLDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTMQIPSDY 129
>gi|224102451|ref|XP_002312682.1| predicted protein [Populus trichocarpa]
gi|222852502|gb|EEE90049.1| predicted protein [Populus trichocarpa]
Length = 468
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 112/232 (48%), Gaps = 52/232 (22%)
Query: 32 DGIKSAVLVPPGKYL--SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH 89
DG SA P G Y ++RF ++ T+ IK ++S H+ +K+N++ I +
Sbjct: 182 DGQGSAWWSPSGVYYIQALRFYDSHNVTVRDIKIMNSPQCHLKFDSSSGIKVNNITIDSP 241
Query: 90 ADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGK 133
+SPNT+GIH+ ++ EI HS I GDDCVS+ GHGIS+G LGK
Sbjct: 242 ENSPNTDGIHLQNTKDVEIQHSNIGCGDDCVSIQTGCSNIHVHHINCGPGHGISLGGLGK 301
Query: 134 G-----INDEEVVGLTVRNCTFTGTNIVT------------------NNVENPIVIDQLY 170
++D V ++++N T +G I T ++V+ P++IDQ Y
Sbjct: 302 DKSVACVSDIVVEKISLQN-TLSGVRIKTWQGGVGSVKNVTFSSIEVSDVKYPVIIDQFY 360
Query: 171 CPYNKCNIKVPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
C C + + V S V+++ I G+ +N +PC ++ + +I
Sbjct: 361 CDKKICKNQTEA-VAISGVKYDRIIGSYSVQPLHLACSNDVPCTDVDLIDIQ 411
>gi|357518267|ref|XP_003629422.1| Polygalacturonase [Medicago truncatula]
gi|355523444|gb|AET03898.1| Polygalacturonase [Medicago truncatula]
Length = 373
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 107/281 (38%), Gaps = 112/281 (39%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY--------------- 45
+FNV +GA DGI DD++AF AW C +G S +++PP K
Sbjct: 32 IFNVIAYGARGDGISDDTQAFLRAWNHTCGAEG-TSTLVIPPKKLYFVNNLEFRGACKAT 90
Query: 46 -LSIRFNFLNDSTITG-------------------------------------IKSVDSR 67
+ I+ ++N TI G ++ +S
Sbjct: 91 SILIQIQYVNGLTIDGTRRGRINGHGSTWWQCKSCPRPRILSFYACNDLSVRNVRITNSP 150
Query: 68 YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----- 122
H I GC K+++L + + + SPNT+G I SS I S I TGDDC+++
Sbjct: 151 GAHGTINGCNRAKISNLDVQSPSHSPNTDGFDISSSKNILIEDSTIRTGDDCIAINGGSS 210
Query: 123 -------------------------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
GHGIS+GSLGKG + E V + V NC+FT
Sbjct: 211 YISVSRFRAVKTGGSALTGFSSTRVRVACGPGHGISIGSLGKGNSYETVEEVNVPNCSFT 270
Query: 152 GT----------------------NIVTNNVENPIVIDQLY 170
T I NV+N I+IDQ Y
Sbjct: 271 NTTNGARIKTFPGGSGYAKKITFEQIQLTNVKNTIIIDQHY 311
>gi|449484419|ref|XP_004156878.1| PREDICTED: probable polygalacturonase At3g15720-like [Cucumis
sativus]
Length = 415
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 49/208 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
++G+ +S H++I+ C + ++ L I A +SPNT+GI + S+ +I + I TGD
Sbjct: 178 LSGLTHSNSPKSHMHIVRCNHASISKLNIVAPENSPNTDGIDVAHSSHVKIHNCNIGTGD 237
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+++ GHGIS+GSLGK V + V+NC GT
Sbjct: 238 DCIAISEGTSNIHIANIQCGPGHGISIGSLGKDGTSSSVEDVRVQNCHLKGTMYGARIKT 297
Query: 154 --------------NIVTNNVENPIVIDQLYC-PYNKCNIKVPSQVKTSNVRFNNIRGTS 198
I + V PI+IDQ YC C + S V+ S+V + + GTS
Sbjct: 298 WQGGAGYARKISFQGITLDQVHKPILIDQYYCNGKTDCKNQQTSAVEVSDVLYQGLHGTS 357
Query: 199 ANKIP----------CQNIGIGNINWVY 216
A ++ C+NI + +I+ Y
Sbjct: 358 ATEVAVELSCSETVGCRNIVLEDIDIRY 385
>gi|50313468|gb|AAT74604.1| polygalacturonase [Musa acuminata]
Length = 320
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 108/252 (42%), Gaps = 89/252 (35%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VP-----------------PG 43
F+V+ FGAV DG+ DD++AF +AWR AC+ ++SA L VP PG
Sbjct: 71 FDVRSFGAVGDGVTDDTEAFRSAWRAACS---VESATLFVPSDGVFMITSTIFPGPCQPG 127
Query: 44 KYLSI---------------------RFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
+ RF + T+ ++ +S FHI C ++ +
Sbjct: 128 LVFQVILSTKITCSGCIXLLLWIQLIRFFMSCNLTVRDLRIENSPQFHIKFDACEDVHIE 187
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIAT---------GDDCVSL----------- 122
L I + A SPNT+G+HI ++ I +S+I+T GDDC+S+
Sbjct: 188 GLSINSPAFSPNTDGVHIENTRSVTIYNSMISTGWKRLLSGSGDDCISIGPGCSDVDIQN 247
Query: 123 -----GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN----------------------I 155
GHGIS+GSLG ++ V ++V+N ++ +
Sbjct: 248 VTCGPGHGISIGSLGMHNSEACVSNVSVKNAVIRNSDNGVRIKTWQGGMGSVSDISFDTV 307
Query: 156 VTNNVENPIVID 167
NV NPI+ID
Sbjct: 308 YMENVRNPILID 319
>gi|255556512|ref|XP_002519290.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223541605|gb|EEF43154.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 479
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 100/217 (46%), Gaps = 50/217 (23%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ++ ++G+ +S FH+ GC + + L I++ SPNT+GIHI ++
Sbjct: 219 IRFFMSSNLVVSGLSIQNSPQFHMKFDGCEGVLIEKLSISSPKLSPNTDGIHIENTKTVG 278
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S+I+ GDDC+S+G HGIS+GSLG + V +TV N
Sbjct: 279 IYNSMISNGDDCISIGTGCSNVDIEGVTCGPSHGISIGSLGVHNSQACVSNITVSNAIIR 338
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N ++IDQ YC C + S V ++V
Sbjct: 339 DSDNGVRIKTWQGGTGCVSGISFQNIQMENVRNCMIIDQYYCMSKAC-LNQTSAVHVTDV 397
Query: 190 RFNNIRGT-----------SANKIPCQNIGIGNINWV 215
+ NI+GT ++ +PC NI + + +
Sbjct: 398 SYRNIKGTYDVRTPPIHFACSDTVPCTNITLSEVELL 434
>gi|168005233|ref|XP_001755315.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693443|gb|EDQ79795.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 104/231 (45%), Gaps = 52/231 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+++F + ++ I DS H+ C +++ ++ I + SPNT+GIH+ ++ +
Sbjct: 154 ALKFYGCINVSVRDITIQDSPQMHLKFDNCQQVEVFNVSILSPGWSPNTDGIHLQNTGYA 213
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + VIA GDDC+SL GHGIS+G LG+G + V +TV++
Sbjct: 214 LLQNLVIAAGDDCISLQTGTTDVTIRDVVCGPGHGISIGGLGQGGSQACVSNITVQDVLI 273
Query: 151 TGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T + NV+NPIVI+Q YC +C + V S+
Sbjct: 274 KDTQNGVRIKTWQGGSGVVQHVTFDTVTVVNVQNPIVINQFYCDAKECQNDT-AAVLISD 332
Query: 189 VRFNNIRGT-------------SANKIPCQNIGIGNINWVYNGVNVKVEGP 226
+ ++NIRGT ++ +PC+NI + N+ + N P
Sbjct: 333 IAYSNIRGTYDQARCHAPVYFACSDTVPCRNIKVDNVELLPAQANFFTSRP 383
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
++V F AV DGI DD+KAF+ WR AC +S+V+V P Y+ +
Sbjct: 7 YDVMAFNAVGDGITDDTKAFQATWRAACQ---SESSVMVVPAYYVFV 50
>gi|413943671|gb|AFW76320.1| hypothetical protein ZEAMMB73_576403 [Zea mays]
Length = 288
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 59/81 (72%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ F+N+ ++G+ ++S++FH+N+ C N+ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 143 SLVMYFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGI 202
Query: 107 EISHSVIATGDDCVSLGHGIS 127
I+++VI GDDC+S+G G S
Sbjct: 203 TITNTVIGVGDDCISIGPGTS 223
>gi|350535549|ref|NP_001234200.1| polygalacturonase [Solanum lycopersicum]
gi|4325090|gb|AAD17250.1| polygalacturonase [Solanum lycopersicum]
Length = 367
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 111/251 (44%), Gaps = 55/251 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
++FN+ N + GIK V+S HI + + ++++ I+A S NT+GI I S +
Sbjct: 121 VQFNYCNGLRLNGIKLVNSSRDHIILTYNKGVTISNIHISAPNYSRNTDGIDIFFSRQVQ 180
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I S+I TGDDC+ + GHGIS+GSLG V + + NC
Sbjct: 181 IRDSIIQTGDDCIGINTGCSDINITGIRCGPGHGISIGSLGPNNTFANVENVYITNCHLE 240
Query: 152 GT----------------------NIVTNNVENPIVIDQLYC-PYNKCNIKVPSQVKTSN 188
T NI NVENPI+IDQ YC + C +V S VK SN
Sbjct: 241 DTQNGVRIKTWQGGSGYARFIHFENINLKNVENPIIIDQNYCNSVHSCQPQV-SAVKVSN 299
Query: 189 VRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V + I GT+++K+ C N+ + NI + G + + C+NVK
Sbjct: 300 VTYKKIYGTTSSKLAIKMNCSNSTACTNVELENIY-----ITSVEPGKKIFATCNNVKGK 354
Query: 239 LFGKQIPATCV 249
F C+
Sbjct: 355 AFSNSPHVFCL 365
>gi|224128528|ref|XP_002329026.1| predicted protein [Populus trichocarpa]
gi|222839697|gb|EEE78020.1| predicted protein [Populus trichocarpa]
Length = 330
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 114/251 (45%), Gaps = 56/251 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++RF + I V+S HI +LG N +L L I + SPNT+GIHI SSN
Sbjct: 80 AVRFEGCEHLLVDHINIVNSPQIHITLLGSRNAELRFLDIQSPESSPNTDGIHISSSNDV 139
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I S+I +GDDC+S+ GHGIS+GS G G N+ EV G+ V F
Sbjct: 140 TIHDSIIGSGDDCISIGDYTSNITILDVSCGPGHGISIGSFGGGGNEVEVEGIFVSRANF 199
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
+GT +++ VENPI+ID+ Y + N + V S+
Sbjct: 200 SGTTNGARIKTWQGARGNVRDVHFSDLIFTAVENPIIIDEHYGDPQEKN---QTGVHISD 256
Query: 189 VRFNNIRGTS----------ANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V ++ +GT+ ++ + C NI + NI + + G + +S C+N
Sbjct: 257 VSYSRAQGTAKTAVAINFNCSSSVACTNITLDNIQ-----LKSSIRGQQLSSFCNNAHGI 311
Query: 239 LFGKQIPATCV 249
G P +C+
Sbjct: 312 TKGIVYPKSCL 322
>gi|340034707|gb|AEK28685.1| pectin lyase superfamily protein [Populus tremula]
Length = 142
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 75/143 (52%), Gaps = 40/143 (27%)
Query: 123 GHGISVGSLGKGI---NDEEVVGLTVRNCTFTGT-----------------------NIV 156
GHGISVGS+G N + VVGLTV N TFT T +I+
Sbjct: 3 GHGISVGSMGGNTVIENKDIVVGLTVTNSTFTNTSNGLRIKTWASRYEGLASGFTYEDII 62
Query: 157 TNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQN 206
N+VE+PI+IDQ YCP + C K S+++ ++ ++NIRGTS +K +PC N
Sbjct: 63 MNDVEHPIIIDQQYCPSSSCESKTASRIQIKDITYSNIRGTSKSKAAVTLNCSSIVPCNN 122
Query: 207 IGIGNINWVYNGVNVKVEGPETT 229
I + +I VY G EGP ++
Sbjct: 123 IVLKDIRLVYTG----NEGPASS 141
>gi|413943678|gb|AFW76327.1| hypothetical protein ZEAMMB73_655172 [Zea mays]
Length = 308
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 59/81 (72%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ F+N+ ++G+ ++S++FH+N+ C N+ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMYFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 107 EISHSVIATGDDCVSLGHGIS 127
I+++VI GDDC+S+G G S
Sbjct: 223 TITNTVIGVGDDCISIGPGTS 243
>gi|157165818|gb|ABV24998.1| polygalacturonase 1 [Oncidium Gower Ramsey]
Length = 482
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + + ++ +T+ DS NT+GIH
Sbjct: 213 MPSIKPTALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTSPGDSLNTDGIH 272
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H ++ GDDCVS+ GHGIS+G LG+ V +
Sbjct: 273 LQNSKDVAIHHCNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLGRDNTKACVSNI 332
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TV++ GT NI + V+ PIVIDQ YC + C +
Sbjct: 333 TVQDVNMYGTMTGVRIKTWQGGSGSVQSIRFSNIRVSEVQTPIVIDQFYCDRSSCKNQT- 391
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNIN 213
+ V S++ + +I+GT K PC +I + I
Sbjct: 392 AAVALSSIAYESIKGTYTVKPVHLACSDGTPCSDISLTEIE 432
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+ NV DFGA DG+ DD+KAFE AW AC ++++ + P Y
Sbjct: 87 MLNVLDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTMQIPSDY 128
>gi|225425577|ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
gi|297739064|emb|CBI28553.3| unnamed protein product [Vitis vinifera]
Length = 505
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + + ++ +++ DS NT+GIH
Sbjct: 236 MPSTKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCMGVSVYEMSVSSPGDSVNTDGIH 295
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I + +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 296 LQNSKDVLIHATNLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGRDGTKACVSNI 355
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + VE PIVIDQ YC KC +
Sbjct: 356 TVRDIIMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKGKCKNQT- 414
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S V S + + I+GT ++ +PC ++ + I
Sbjct: 415 SAVALSGITYEKIKGTYTVKPVHFACSDNLPCMDVTLTGIE 455
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
FNV DFGA DG DD+KAF++AW AC ++++ +V P +Y+
Sbjct: 90 FNVLDFGAKGDGDTDDTKAFQSAWASACK---VEASTIVVPSEYV 131
>gi|357128627|ref|XP_003565972.1| PREDICTED: probable polygalacturonase At1g80170-like [Brachypodium
distachyon]
Length = 445
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 106/254 (41%), Gaps = 56/254 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F D ++ GI +S H+ CYN+K N L++TA DSP T G+ + SS
Sbjct: 167 AVHFEDCEDVSVMGITVQNSPRQHLAFTRCYNVKANYLRVTAPEDSPGTVGVLLASSTNV 226
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV--------- 141
+ + + G DCVS+ G GIS+G LG+ + ++
Sbjct: 227 HVMDDLFSVGGDCVSIVGNCTDVRLRAVSCGPGAGISIGDLGEDQSQHKIEKIKMDTLFI 286
Query: 142 -----GLTVRN----CTFTG----TNIVTNNVENPIVIDQLYCPYNK---CNIKVPSQVK 185
G+ V+ C F I+ NV NPI+IDQ Y N+ C S V
Sbjct: 287 SNTKNGVRVKTHEDGCGFARKVKFAQILMRNVSNPIIIDQHYSYSNRGTPCGTPNASAVA 346
Query: 186 TSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
+ +N+I GTSA ++ PC+ + + +N G G ++ C
Sbjct: 347 VEKINYNDITGTSATELAVTFACSDAMPCRRLSMSGVNLTRAG-----GGGNVSAYCHQA 401
Query: 236 KPTLFGKQIPATCV 249
G+ +P +C+
Sbjct: 402 FGRNVGEVVPESCL 415
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
+ + DFGAV DGI +D++AF AW AC G + + VP GK I
Sbjct: 32 LLTLDDFGAVGDGIANDTQAFVDAWSAACG-TGDTTYLNVPAGKSYQI 78
>gi|449441508|ref|XP_004138524.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 475
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 39/188 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ++ + ++ +S FH+ GC + + L I++ SPNT+GIHI ++ G
Sbjct: 214 IRFFMSSNLAVNSLRIQNSPMFHMKFDGCEGVLIEKLSISSPKLSPNTDGIHIENTKGVG 273
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S+I+ GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 274 IYNSMISNGDDCISIGPGCANVAIEGVTCGPSHGISIGSLGVHNSQACVSNITVRNAVIR 333
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N I++DQ YC C + S V + V
Sbjct: 334 DSDNGLRIKTWQGGSGSVSDILFENIQMENVRNCIIVDQYYCLSKDC-LNQTSAVFVNQV 392
Query: 190 RFNNIRGT 197
+ NI+GT
Sbjct: 393 LYKNIKGT 400
>gi|255576402|ref|XP_002529093.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223531444|gb|EEF33277.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 321
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 126/308 (40%), Gaps = 76/308 (24%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL-------------- 46
++NV +GA DG D ++AF AW++AC+ + + VP G++L
Sbjct: 29 IYNVSSYGAKPDGTTDSTEAFIAAWKQACS-SLEPTTIYVPLGRFLLRNVAFRGKCRNNA 87
Query: 47 -SIRFNFL----NDSTITG-------IKSVDSRYFHINILGCYNLKLNDLKITAHADSPN 94
IR + + +D + G ++VD F +L L + K TA
Sbjct: 88 IQIRIDGMLVAPSDYRVIGHSENWLLFENVDGVSFFGGVLDAQGTGLWNCKATAKNCPSG 147
Query: 95 TEGIHIGSSNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT- 153
+ ++N EI +S + +GSLGK ++ V +TV+ TFTGT
Sbjct: 148 ATSLRFTNANNIEIKG---------LSSLNSQFIGSLGKEFHEPGVQNVTVKTVTFTGTE 198
Query: 154 ----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRF 191
N + NV NPIVIDQ YCP+ + S +K SNV +
Sbjct: 199 NGVRIKAWARPSTGFARNISFQNAIMKNVHNPIVIDQNYCPHKRNCPHQGSGIKISNVCY 258
Query: 192 NNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
NI GTSA ++ PC I + N+ Y P S C+N T G
Sbjct: 259 QNIYGTSATEVAMRFDCSKKNPCTGIRLQNVVLTYK------NQPADAS-CTNADGTASG 311
Query: 242 KQIPATCV 249
PA+C+
Sbjct: 312 LVNPASCL 319
>gi|449528409|ref|XP_004171197.1| PREDICTED: polygalacturonase At1g48100-like, partial [Cucumis
sativus]
Length = 263
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 90/188 (47%), Gaps = 39/188 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ++ + ++ +S FH+ GC + + L I++ SPNT+GIHI ++ G
Sbjct: 2 IRFFMSSNLAVNSLRIQNSPMFHMKFDGCEGVLIEKLSISSPKLSPNTDGIHIENTKGVG 61
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S+I+ GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 62 IYNSMISNGDDCISIGPGCANVAIEGVTCGPSHGISIGSLGVHNSQACVSNITVRNAVIR 121
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N I++DQ YC C + S V + V
Sbjct: 122 DSDNGLRIKTWQGGSGSVSDILFENIQMENVRNCIIVDQYYCLSKDC-LNQTSAVFVNQV 180
Query: 190 RFNNIRGT 197
+ NI+GT
Sbjct: 181 LYKNIKGT 188
>gi|326503442|dbj|BAJ86227.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 54/217 (24%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF + + G++ +S FH GC ++ ++ L I++ A+SPNT+GIH+ ++
Sbjct: 227 IRFFESCNLVVQGLRVENSPEFHFRFDGCSDVLVDGLFISSPANSPNTDGIHVENTERVG 286
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S I+ GDDC+S+ GHGIS+GSLG + V +TVR+
Sbjct: 287 IYNSKISNGDDCISIGTGSYDVDIQNVTCGPGHGISIGSLGVHNSQACVANVTVRDAVIR 346
Query: 149 ---------------------TFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
TF G + NV N I+IDQ YC +C + + V +
Sbjct: 347 NSDNGLRIKTWQGGMGSVSGITFDG--VTMENVRNCIIIDQYYCQDKRC-MNQSTAVHVT 403
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNIN 213
+V + N+RG+ ++ +PC N+ + +
Sbjct: 404 DVSYANVRGSYDVRSAPIHFACSDTVPCTNVTMAEVE 440
Score = 43.5 bits (101), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V+ +GA + DD++AF AWR AC ++SAVL+ P
Sbjct: 93 VFDVRAYGATGESTADDTEAFRAAWRAAC---AVESAVLLVP 131
>gi|302801183|ref|XP_002982348.1| hypothetical protein SELMODRAFT_116336 [Selaginella moellendorffii]
gi|300149940|gb|EFJ16593.1| hypothetical protein SELMODRAFT_116336 [Selaginella moellendorffii]
Length = 418
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 114/275 (41%), Gaps = 57/275 (20%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
E+ W ++C + S P + L+I+ N +T+ + V+S+ H+ N++
Sbjct: 138 ESWWEQSCKRN--HSNPCHPAPEALTIKS--CNSTTVRNLHFVNSQQMHLVFDTGVNIRA 193
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
L I+A SPNT+GIH+ I VIATGDDC+S+ GHG
Sbjct: 194 IGLNISAPQKSPNTDGIHLHDVQSGFIQDCVIATGDDCISIQTGSSRIHIKNVYCGPGHG 253
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLGK + V + V GT N+ V NP
Sbjct: 254 ISIGSLGKDGSAGNVRAVVVDGAVLNGTTNGLRIKSWQGGHGKVYGVLYQNVRMIGVANP 313
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNIN 213
I+IDQ YC + + S V+ S + + NI GTS ++ + C I + ++N
Sbjct: 314 IIIDQYYCDSSVPCLNQTSGVEVSGIVYRNITGTSSTAVAVRFACSDSVSCHGIVLMDVN 373
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
+ +S C N + G+ P C
Sbjct: 374 -----LTSVKAKSSVSSFCENAQGIALGENSPQGC 403
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP-GKYL 46
+NV D+GA++DG+ DDS+AF AW AC + S +++P G YL
Sbjct: 35 YNVLDYGALSDGVSDDSEAFLAAWSAAC--ESNYSVMVIPENGTYL 78
>gi|27902550|gb|AAO24262.1| putative style polygalacturonase [Turnera subulata]
Length = 473
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 98/221 (44%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF T+TGI +S H+ C ++++D ++ +SPNT+GIH
Sbjct: 213 MPSTKPTALRFYGSTGVTVTGITIQNSPQTHLKFDSCTGVQVSDFTTSSPGNSPNTDGIH 272
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDC+S+ GHGIS+G LGK V +
Sbjct: 273 LQNSQNVLIYSSDLACGDDCISIQTGCSNVFIHNVNCGPGHGISIGGLGKDNTKACVSNV 332
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +N+ + V PI+IDQ YC +KC
Sbjct: 333 TVRDVSMHNTLTGVRIKTWQGGSGSVQGITFSNVQVSGVGTPIMIDQFYCDGSKCK-NDS 391
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNIN 213
S V + + + I+GT K +PC + + I
Sbjct: 392 SAVALTGINYLGIKGTYTEKPIHFACSDSMPCVGVSLSTIE 432
>gi|157165824|gb|ABV25001.1| polygalacturonase 4 [Oncidium Gower Ramsey]
Length = 483
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + + ++ +T+ DS NT+GIH
Sbjct: 214 MPSIKPAALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTSPGDSLNTDGIH 273
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H ++ GDDCVS+ GHGIS+G LG+ V +
Sbjct: 274 LQNSKDVVIHHCNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLGRDNTKACVSNI 333
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TV++ GT NI + V+ PIVIDQ YC + C +
Sbjct: 334 TVQDVNMYGTMTGVRIKTWQGGSGSVQSIRFSNIRVSEVQTPIVIDQFYCDRSSCKNQT- 392
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNIN 213
+ V S + + +I+GT K PC +I + I
Sbjct: 393 AAVALSGIAYESIKGTYTVKPVHLACSDGTPCSDISLTEIE 433
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+FNV DFGA DG+ DD+KAFE AW AC ++++ + P Y
Sbjct: 88 MFNVLDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTMQIPSDY 129
>gi|147795880|emb|CAN65317.1| hypothetical protein VITISV_006410 [Vitis vinifera]
Length = 388
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + + ++ +++ DS NT+GIH
Sbjct: 119 MPSTKPTALRFYGSFNVTVTGITIQNSPQCHLKFDNCMGVSVYEMSVSSPGDSVNTDGIH 178
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I + +A GDDCVS+ GHGIS+G LG+ V +
Sbjct: 179 LQNSKDVLIHATNLACGDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGRDGTKACVSNI 238
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T+ G +NI + VE PIVIDQ YC KC +
Sbjct: 239 TVRDIIMHNTMNGVRIKTWQGGSGSVQGVLFSNIQVSEVELPIVIDQFYCDKGKCKNQT- 297
Query: 182 SQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNI 212
S V S + + I+GT ++ +PC ++ + I
Sbjct: 298 SAVALSGITYEKIKGTYTVKPVHFACSDNLPCMDVTLTGI 337
>gi|157165826|gb|ABV25002.1| polygalacturonase 5 [Oncidium Gower Ramsey]
Length = 484
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 48/221 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + + ++ +T+ DS NT+GIH
Sbjct: 215 MPSIKPTALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTSPGDSLNTDGIH 274
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H ++ GDDCVS+ GHGIS+G LG+ V +
Sbjct: 275 LQNSKDVVIHHCNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLGRDNTKACVSNI 334
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TV++ GT NI + V+ PIVIDQ YC + C +
Sbjct: 335 TVQDVNMYGTMTGVRIKTWQGGSGSVQSIRFSNIRVSEVQTPIVIDQFYCDRSSCKNQT- 393
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNIN 213
+ V S + + +I+GT K PC +I + I
Sbjct: 394 AAVALSGIAYESIKGTYTVKPVHLACSDGTPCSDISLTEIE 434
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+FNV DFGA DG+ DD+KAFE AW AC ++++ + P Y
Sbjct: 89 MFNVLDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTVQIPSDY 130
>gi|296086744|emb|CBI32893.3| unnamed protein product [Vitis vinifera]
Length = 101
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 63/105 (60%), Gaps = 19/105 (18%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IP 203
+IV NNV NPI+IDQ YCP+N+CN+K S++K SNV F NI+GT++ + +P
Sbjct: 5 DIVMNNVGNPIIIDQKYCPHNQCNLKRLSRIKLSNVSFRNIQGTTSTQVPVKLVCSQGVP 64
Query: 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
CQ+ +G+ N EG S C N+KP L KQ+P TC
Sbjct: 65 CQDFELGDNNG--------NEG-LAMSQCKNIKPNLLDKQLPRTC 100
>gi|297814139|ref|XP_002874953.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
gi|297320790|gb|EFH51212.1| glycoside hydrolase family 28 protein [Arabidopsis lyrata subsp.
lyrata]
Length = 480
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 114/228 (50%), Gaps = 51/228 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++RF ++ T+ G+ +S H+ + GC+ + +N ++I + + SPNT+GIHI +S
Sbjct: 214 ALRFFMSSNVTVKGLSIKNSPQVHLKLDGCHVVHINSIRIISPSSSPNTDGIHIENSKSV 273
Query: 107 EISHSVIATGDDCVSL-----------------GHGISVGSLGKGINDEEVVGLTVRNC- 148
EI +SVI+ GDDCVS+ GHGIS+GSLG+ + V +TVR+
Sbjct: 274 EIYNSVISNGDDCVSIGPGSYDIDIRNLTCGPGGHGISIGSLGEKSSHACVSNVTVRDSF 333
Query: 149 -----------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
T+ G NI + V NPI+IDQ YC C K S V +
Sbjct: 334 IKFSENGVRIKTWQGGSGSVSGVTFNNIHVDTVRNPIIIDQYYCTAKSCANKT-SAVFVN 392
Query: 188 NVRFNNIRGT-----------SANKIPCQNIGIGNINWVYNGVNVKVE 224
++ + +I+GT +N +PC N+ + +I + + ++ V+
Sbjct: 393 DIVYQSIKGTYDIRSPPMHFGCSNNVPCTNLTLSDIELLPSKKDIVVD 440
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 8/74 (10%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREAC-NW-DGIKSAVLVPPGKYLSIRFNFLNDSTI 58
V+NVK +GAV DG+ DD+++F+TAW AC N+ + S +LVP G F F+ STI
Sbjct: 76 VYNVKKYGAVGDGVTDDTESFKTAWDSACGNYKNNTASVLLVPYG------FTFMIRSTI 129
Query: 59 TGIKSVDSRYFHIN 72
+YF ++
Sbjct: 130 FTGPCRSYQYFQVD 143
>gi|356553680|ref|XP_003545181.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 402
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 88/183 (48%), Gaps = 38/183 (20%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
N+ +TG + ++S HI+I + + ++ ITA DSPNT+GI + S+ I S I
Sbjct: 162 NNLQLTGTRHLNSARNHISINNSNHTHIFNVTITAPQDSPNTDGIDVSQSSYILIQRSTI 221
Query: 114 ATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN--- 154
ATGDDC+++ GHGISVGSLGK + V + V NC F G +
Sbjct: 222 ATGDDCIAMKSGTSYVNITGITCGPGHGISVGSLGKKGTCQTVEHVHVNNCNFKGADNGM 281
Query: 155 -------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIR 195
I+ N +NPI+IDQ Y + K S+V+ S V + +
Sbjct: 282 RIKTWPGGCGYARNIKFEHILLTNTKNPIIIDQDYENVQNEDKKQTSEVQISGVTYRCVN 341
Query: 196 GTS 198
GTS
Sbjct: 342 GTS 344
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV D+GA+ DG+ DDS+AF AW C + + VPPGK ++
Sbjct: 32 FNVMDYGAIGDGLTDDSQAFLKAWSMVCAMKNGAATLKVPPGKTFMLK 79
>gi|255573961|ref|XP_002527898.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223532673|gb|EEF34455.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 477
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 49/201 (24%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+ I+ ++S H+ +K+N++ I++ +SPNT+GIH
Sbjct: 205 IPDMKPTALRFYASYNVTVRNIEIINSPQCHLKFDNSKGIKVNNITISSPENSPNTDGIH 264
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV-- 141
+ ++ EI HS I TGDDC+S+ GHGIS+G LGK D+ V
Sbjct: 265 LQNTQDVEIQHSNIGTGDDCISIQTGCSNIHVHHINCGPGHGISLGGLGK---DKSVACV 321
Query: 142 ------------------------GL-TVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKC 176
GL +V+N +F +NI ++V+ PI+IDQ YC + C
Sbjct: 322 SNIVVEKISLHNTLAGARIKTWQGGLGSVKNVSF--SNIQVSDVKYPIIIDQFYCDKHIC 379
Query: 177 NIKVPSQVKTSNVRFNNIRGT 197
+ + V S V+F+ I G+
Sbjct: 380 KNQTEA-VAISGVKFDQIIGS 399
>gi|356544252|ref|XP_003540568.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 402
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 87/182 (47%), Gaps = 38/182 (20%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
N+ +TG + ++S HI+I + + ++ ITA DSPNT+GI + S+ I S I
Sbjct: 162 NNLQLTGTRHLNSARNHISINNSNHTHIFNVTITAPQDSPNTDGIDVSQSSYILIQRSTI 221
Query: 114 ATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTN--- 154
ATGDDC+++ GHGISVGSLGK + V + V NC F G +
Sbjct: 222 ATGDDCIAMNSGTSYVNITGITCGPGHGISVGSLGKKGTCQTVEHVHVSNCNFKGADNGM 281
Query: 155 -------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIR 195
IV N +NPI+IDQ Y + K S+V+ S V + +
Sbjct: 282 RIKTWPGGCGYARNIKFEHIVLTNTKNPIIIDQDYENVQNEDKKQTSEVQISGVTYRYVN 341
Query: 196 GT 197
GT
Sbjct: 342 GT 343
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
FNV D+GA+ DG+ DDS+AF AW C + + VPPGK ++
Sbjct: 32 FNVMDYGAIGDGLTDDSQAFLKAWSMVCAMKNGAATLKVPPGKTFMLK 79
>gi|225425613|ref|XP_002266099.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera]
gi|297739091|emb|CBI28580.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 130/344 (37%), Gaps = 132/344 (38%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDG--------------------------- 33
+F+V FGA DGI DDSKA AW AC G
Sbjct: 81 IFDVLSFGAKGDGISDDSKALLAAWGAACKVPGATLEIPSEFKFLIEPITLQGPCMPRLV 140
Query: 34 --IKSAVLVPP--------GKYLSIRFNFLNDSTITGIKSVDS----------------- 66
I +L PP + I F +L++ TI G +VD
Sbjct: 141 LQIDGTLLAPPKVASWPKSSLFQWINFKWLHNFTIQGTGTVDGQGSNWWSLSQIHYIQKR 200
Query: 67 ------------RYFH-----------INILGCY-------NLKLNDLKITAHADSPNTE 96
R++ IN C+ + + ++ I++ +SPNT+
Sbjct: 201 SKDIPNMKPTALRFYASYDVTVCNIRIINSPQCHLKFDYSGRVNVTNITISSPENSPNTD 260
Query: 97 GIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEV 140
GIH+ ++ EI HS I GDDCVS+ GHGIS+G LGK + V
Sbjct: 261 GIHLQNTQDVEIQHSNIGCGDDCVSIQTGCSNVHVHHINCGPGHGISLGGLGKEKSAACV 320
Query: 141 VGLTVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNI 178
L V N T+ G +NI ++V+ PI+IDQ YC + C
Sbjct: 321 SNLVVDNISVQNALYGVRIKTWQGGIGSVKNVSFSNIQVSDVKVPIMIDQYYCDKHICKN 380
Query: 179 KVPSQVKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
+ V S V +N I GT +N +PC ++ + +I
Sbjct: 381 QT-GAVAISGVTYNQIIGTYSVQPIHLACSNNVPCTDVDLIDIQ 423
>gi|224101497|ref|XP_002312305.1| predicted protein [Populus trichocarpa]
gi|222852125|gb|EEE89672.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 90/194 (46%), Gaps = 39/194 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ++ ++G++ +S FH+ GC + + L I++ SPNT+GIHI ++
Sbjct: 221 IRFFMSSNLAVSGLRIQNSPQFHMKFDGCEGVLIEKLSISSPKLSPNTDGIHIENTKAVG 280
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I S I+ GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 281 IYDSSISNGDDCISIGTGCSNVDIDGLTCGPSHGISIGSLGVHHSQACVRNITVRNSVIK 340
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N + IDQ YC C + S V + V
Sbjct: 341 ESDNGLRIKTWQGGTGCVSDINFENIQMENVRNCMNIDQYYCLSKAC-LNETSAVYVTGV 399
Query: 190 RFNNIRGTSANKIP 203
+ NI+GT + P
Sbjct: 400 TYRNIKGTYDVRTP 413
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 8/58 (13%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
+FNV D+GAV DG DD+ AF AW+EAC G++S V++ P + +F+ STI
Sbjct: 87 IFNVMDYGAVGDGSTDDTDAFRQAWKEAC---GVESGVILAPSGH-----SFMITSTI 136
>gi|297736775|emb|CBI25976.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 39/194 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ++ ++ ++ +S FH+ GC + + L I++ SPNT+GIHI ++
Sbjct: 114 IRFFMSSNLVVSSLRIQNSPQFHMKFDGCEGVLIEKLSISSPKLSPNTDGIHIENTKSVG 173
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S I GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 174 IYNSEIGNGDDCISIGRGCSDVNIEGVTCGPSHGISIGSLGVQNSQACVSNITVRNVFIK 233
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N ++IDQ YC C + S V ++V
Sbjct: 234 DSDNGVRIKTWQGGTGSVSGISFENIQMENVRNCMIIDQYYCLSKACRNQT-SAVYLTDV 292
Query: 190 RFNNIRGTSANKIP 203
+ NI+GT + P
Sbjct: 293 TYRNIKGTYDVRSP 306
>gi|357485783|ref|XP_003613179.1| Polygalacturonase [Medicago truncatula]
gi|355514514|gb|AES96137.1| Polygalacturonase [Medicago truncatula]
Length = 489
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 135/363 (37%), Gaps = 152/363 (41%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDG---------------------------- 33
F++ FGA +G+ DDS+AF AW+ AC G
Sbjct: 59 FDIMSFGAKGNGVSDDSEAFLAAWKCACKVSGATIKVPEKLKFLIKPITLQGPCMPDLTL 118
Query: 34 -IKSAVLVPP--------GKYLSIRFNFLNDSTITGIKSVD---------SRYFHINILG 75
I +L PP + I F ++ + TI G ++D S+ + I +
Sbjct: 119 QIDGTILAPPEVSSWPKSNLFQWINFKWVQNFTIKGYGTIDGQGSNWWSSSKLYDIQAIR 178
Query: 76 CYN--------------------------LKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
Y+ +K++++ I++ +SPNT+GIH+ ++ EI
Sbjct: 179 FYSSNFVKIRDIKIKNSPLCHLKFDNSKGIKVDNITISSPENSPNTDGIHLQNTQDVEIQ 238
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKG-----IND----------- 137
HS I TGDDCVS+ GHGIS+G LGK ++D
Sbjct: 239 HSNIGTGDDCVSIQTGCSNIHVHHIKCGPGHGISLGGLGKDKSVACVSDIIVEDISMKNT 298
Query: 138 -----------------------------EEVVGLTVRNCTFTGTNIVTN---------N 159
+E + LT R C G +V N +
Sbjct: 299 LYGARIKTWQYHVKSFTLKVMRSEQMFISDEYLHLTSRFCGVGGNGMVKNVSFSRIKVYD 358
Query: 160 VENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS---------ANKIPCQNIGIG 210
V P++IDQ YC C + + V S V+F+ I G+ +N IPC ++ +
Sbjct: 359 VMYPVMIDQYYCDKQICKNQTGT-VIISGVKFDQISGSYTLQPVHLACSNSIPCTDVDLT 417
Query: 211 NIN 213
+I
Sbjct: 418 DIQ 420
>gi|302826393|ref|XP_002994681.1| hypothetical protein SELMODRAFT_47881 [Selaginella moellendorffii]
gi|300137166|gb|EFJ04256.1| hypothetical protein SELMODRAFT_47881 [Selaginella moellendorffii]
Length = 338
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 97/214 (45%), Gaps = 43/214 (20%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W +C D + P ++RF + + GI +S HI ++ ++
Sbjct: 106 WAHSCKKDKSQRCTDAP----TAVRFEDSKNIKVEGITITNSPQIHITFSDSQAIQATNV 161
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
I + SPNT+GIH+ S + I+ GDDCVS+ GHGIS+
Sbjct: 162 VINSPESSPNTDGIHVSGSTNVVVRDGDISAGDDCVSIVSGSSNIQVLGGRCGPGHGISI 221
Query: 129 GSLGKG-----INDEEVVGLT-------VRNCTFTG----------TNIVTNNVENPIVI 166
GSLGKG +++ +V G+ VR T+ G NI +NV+NPI+I
Sbjct: 222 GSLGKGGSYATVSNVQVSGVKIDAATNGVRIKTWQGGKGYVSNVIFENISMDNVKNPIII 281
Query: 167 DQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN 200
DQ YC C K S + V ++NI GTSA+
Sbjct: 282 DQNYCD-GGCGKKRGSSLTIQGVTYSNIVGTSAS 314
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP---PGKYLS 47
VK +GAV DG DD++AF A+ AC G + +LVP G YLS
Sbjct: 1 VKSYGAVGDGKHDDAQAFLDAYNAACQ-AGDNAVILVPSTSAGYYLS 46
>gi|399764482|gb|AFP50441.1| polygalacturonase 11a, partial [Medicago ciliaris]
Length = 142
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G KS V +++ FNF+N+S + + S DS+ FH+ + GC N+ + IT
Sbjct: 53 AAAWSGKKSNSKV----FMNFGFNFVNNSIVRDVTSKDSKNFHVMVFGCNNITFDGFTIT 108
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
A DSPNT+GIH+G S +I ++ I TGDDCVS
Sbjct: 109 APGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVS 142
>gi|225432118|ref|XP_002263668.1| PREDICTED: polygalacturonase At1g48100-like [Vitis vinifera]
Length = 477
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 39/194 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ++ ++ ++ +S FH+ GC + + L I++ SPNT+GIHI ++
Sbjct: 216 IRFFMSSNLVVSSLRIQNSPQFHMKFDGCEGVLIEKLSISSPKLSPNTDGIHIENTKSVG 275
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S I GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 276 IYNSEIGNGDDCISIGRGCSDVNIEGVTCGPSHGISIGSLGVQNSQACVSNITVRNVFIK 335
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N ++IDQ YC C + S V ++V
Sbjct: 336 DSDNGVRIKTWQGGTGSVSGISFENIQMENVRNCMIIDQYYCLSKACRNQT-SAVYLTDV 394
Query: 190 RFNNIRGTSANKIP 203
+ NI+GT + P
Sbjct: 395 TYRNIKGTYDVRSP 408
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTI 58
VF+V FGAV DG DD+ AF AW+ AC ++S +++ P ++ F+ STI
Sbjct: 82 VFDVTSFGAVGDGTTDDTAAFMEAWKAAC---AVESGIVLVPADHV-----FMITSTI 131
>gi|224110914|ref|XP_002315680.1| predicted protein [Populus trichocarpa]
gi|222864720|gb|EEF01851.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 50/215 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++RF ++ T+ I+ V+S H+ +K++++ I + SPNT+GIH+ ++
Sbjct: 123 ALRFYDSHNVTVRDIEIVNSPQCHLKFDSSSGIKVDNITINSPEMSPNTDGIHLQNTKDV 182
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKG-----INDEEVVGLTV 145
EI HS I GDDCVS+ GHGISVG LGK ++D V +++
Sbjct: 183 EIQHSNIGCGDDCVSIQTGCSNIHVHDINCGPGHGISVGGLGKDKSVACVSDIVVEKISL 242
Query: 146 RNCTFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
+N T +G +NI ++V+ P++IDQ YC C + + V S
Sbjct: 243 QN-TLSGVRIKTWQGGIGSVKNVTFSNIEVSDVKYPVIIDQFYCDKKTCKNQTDA-VAIS 300
Query: 188 NVRFNNIRGT---------SANKIPCQNIGIGNIN 213
V++++I+G+ +N +PC + + +I
Sbjct: 301 GVKYDSIKGSYSVQPIHLACSNDVPCTGVDLIDIQ 335
>gi|296082715|emb|CBI21720.3| unnamed protein product [Vitis vinifera]
Length = 90
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 23/90 (25%)
Query: 128 VGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPI 164
+GSLGK N+E VVG++V+NCTFT T +I NNV NPI
Sbjct: 1 MGSLGKYSNEEPVVGISVKNCTFTNTQNGVRVKTWPASHQGTAFEMHFEDIAMNNVGNPI 60
Query: 165 VIDQLYCPYNKCNIKVPSQVKTSNVRFNNI 194
+IDQ YCP+N+CN+K+PS++K +NV F NI
Sbjct: 61 IIDQEYCPHNQCNLKIPSRIKLNNVSFRNI 90
>gi|357512927|ref|XP_003626752.1| Polygalacturonase [Medicago truncatula]
gi|355520774|gb|AET01228.1| Polygalacturonase [Medicago truncatula]
Length = 371
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 93/199 (46%), Gaps = 46/199 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F+ ND +++ ++ +S H++I C + + I + A SPNT+G I S
Sbjct: 149 ALLFHSCNDLSVSNLRITNSPSSHVSINMCNRTTFSHVSINSPATSPNTDGFDISFSTDI 208
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +S I +GDDC+++ GHGISVGSLGK +++V + VRNCTF
Sbjct: 209 RIENSNIKSGDDCIAVNGGSNFINVTGVTCGPGHGISVGSLGKKRTNDQVSDVHVRNCTF 268
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPS--QVKT 186
T I+ NV+N I+IDQ Y N +P V
Sbjct: 269 KETQNGARIKTVPGGSGYARHITYDQIILVNVKNSIIIDQYY------NDIIPQAGDVSV 322
Query: 187 SNVRFNNIRGTSANKIPCQ 205
S+V + GTSAN + Q
Sbjct: 323 SDVTYRGFTGTSANDLAIQ 341
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
++NV +GA DG DDS+AF A+ AC G+ S +++P GK +
Sbjct: 30 IYNVMQYGAHGDGKTDDSQAFINAFNSACKATGM-STLVIPAGKTFMV 76
>gi|62733048|gb|AAX95165.1| endopolygalacturonase [Oryza sativa Japonica Group]
Length = 389
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 111/280 (39%), Gaps = 41/280 (14%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
VF D +VA G D A R A D PP S+ + + G
Sbjct: 118 VFQDVDGVSVAGGTLDGRGRALWACRRARRPD-------CPPATR-SLTIYRSRNVAVRG 169
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120
+ S DS HI + + + D ++A SPNT+GIHI S G + ++VI TGDDCV
Sbjct: 170 LTSRDSAGIHITVQASAGVAIVDTVVSAPGRSPNTDGIHIKQSTGVTVRNAVIGTGDDCV 229
Query: 121 SL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----NIVTNNV 160
S+ GHGIS+GSLG V +TV+ GT I T
Sbjct: 230 SMVEGSSDVLIEAVTCGPGHGISIGSLGDTPEQVAVRNITVKGAALAGTTNGLRIKTWAK 289
Query: 161 ENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIG 210
N + + ++ ++ S ++ S V + +I GTSA PC I +
Sbjct: 290 ANAGAVAGVS--FSGVVMRNGSGIEISGVSYTDIEGTSATATAVRFDCSPSRPCAGIAMR 347
Query: 211 NINWVY-NGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
++ Y E S C N FG P +C+
Sbjct: 348 DVRLRYQPPAAAAEEEQPAASFCRNAHGVAFGDVDPPSCL 387
>gi|222159961|gb|ACM47314.1| polygalacturonase [Capsicum annuum]
Length = 368
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 38/166 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F N + +K +++ H++ C N++ ++L I + +SPNT+GIH+ +++
Sbjct: 194 ALTFYNCNKLKVKNLKIKNAQQIHVSFETCTNVEASNLMINSPENSPNTDGIHVANTHNI 253
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+IS + I TGDDC+S+ GHGIS+GSLG G ++ V + V F
Sbjct: 254 QISSATIGTGDDCISITSGSQKVHATDITCGPGHGISIGSLGSGNSEAHVSDINVYGAKF 313
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYN 174
GT +I VENPI+IDQ YC N
Sbjct: 314 YGTTNGLRIKTWQGGSGSASNIKFQHIDMEGVENPIIIDQNYCDQN 359
Score = 40.0 bits (92), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFL 53
+ +V FGA DG DD++AF+ AW++AC+ + + V+ YL +FL
Sbjct: 68 LIDVSSFGAKGDGNTDDTRAFKQAWQDACSSNTPVNFVVQQNKNYLLKNIHFL 120
>gi|255637916|gb|ACU19275.1| unknown [Glycine max]
Length = 102
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 17/99 (17%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IP 203
++ NNV NPI+IDQ YCP+N+C+ + PS++K S V F NI+GTS K +P
Sbjct: 5 DLTMNNVMNPIIIDQEYCPWNQCSKQNPSKIKISKVSFKNIKGTSGTKEGVVLVCSSGVP 64
Query: 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGK 242
C+ + + +I+ +N G T+ C+NVKPT+ GK
Sbjct: 65 CEAVEMADIDLTFN-------GSAATAKCANVKPTITGK 96
>gi|297802790|ref|XP_002869279.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315115|gb|EFH45538.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 20/128 (15%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I F D G+ ++S HI+I GC N L++L I+A DSPNT+GI+I S+
Sbjct: 150 TISFESCTDIIYNGLTQINSPKNHISIYGCTNATLSNLDISAPEDSPNTDGINICLSHKI 209
Query: 107 EISHSVIATGDDCVSL-------------------GHGISVGSLGKGINDEEVV-GLTVR 146
+I S I TGDDCV++ GHGIS+GSLGK +++V + VR
Sbjct: 210 QILDSSIQTGDDCVAITGGRGGSSDINITGVACGPGHGISIGSLGKDDETDDIVENVIVR 269
Query: 147 NCTFTGTN 154
+C+FTGT
Sbjct: 270 SCSFTGTQ 277
>gi|357436957|ref|XP_003588754.1| PGN [Medicago truncatula]
gi|355477802|gb|AES59005.1| PGN [Medicago truncatula]
Length = 397
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 108/235 (45%), Gaps = 51/235 (21%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + ++G+ ++ H+ ++ ++ ++ + I++ DS NT+GI I +S
Sbjct: 153 ALLFERCDGLQLSGLTHINGPAMHVYVVHSQDVTISHINISSSKDSYNTDGIDISNSIRV 212
Query: 107 EISHSVIATGDDCVSLG-----------------HGISVGSLGKGINDEEVVGLTVRNCT 149
I S+I +GDDC+++ HGISVGSLG G +E + VRNCT
Sbjct: 213 NIHDSIIQSGDDCIAIKGGSQFINVTQVTCGPGTHGISVGSLGGGGAEEFADRVNVRNCT 272
Query: 150 FTGTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
F G + I+ N + NPI I Q Y + VK S
Sbjct: 273 FNGADSAARIKTWPGGKGYAKAIIFDHIIVNQIRNPISIQQHYMRGG----EQKDAVKVS 328
Query: 188 NVRFNNIRGTSANK----IPCQNIGIGNINWVYNGVNVKVEGPET--TSLCSNVK 236
+V F+NI GT + + C NIG NI +N+ P+ +++C+NV+
Sbjct: 329 DVTFSNIYGTCSGDDAIFLDCANIGCDNI--TLEQINITSVDPKKPNSAICNNVQ 381
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
FNV +GA DG DD++AF AW+ C + ++VP F+ +T G
Sbjct: 28 FNVLQYGAKGDGTSDDTQAFLEAWKALCAANQGTPTLVVPAEHTF-----FVRQATFQG- 81
Query: 62 KSVDSRYFHINILG 75
S+ HI I+G
Sbjct: 82 -PCKSQNLHIQIMG 94
>gi|89145851|gb|ABD62081.1| putative style polygalacturonase [Turnera subulata]
Length = 473
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 97/220 (44%), Gaps = 48/220 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF T+TGI +S H+ C ++++D ++ +SPNT+GIH
Sbjct: 213 MPSTKPTALRFYGSTGVTVTGITIQNSPQTHLKFDSCTGVQVSDFTTSSPGNSPNTDGIH 272
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I S +A GDDC+S+ GHGIS+G LGK V +
Sbjct: 273 LQNSQNVLIYSSDLACGDDCISIQTGCSNVFIHNVNCGPGHGISIGGLGKDNTKACVSNV 332
Query: 144 TVRNC----TFTG------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TVR+ T TG +N+ + V PI+IDQ YC + C
Sbjct: 333 TVRDVSMHNTLTGVRIKTWQGGSGSVQGITFSNVQVSGVGTPIMIDQFYCDGSICK-NDS 391
Query: 182 SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNI 212
S V + + + I+GT K +PC + + I
Sbjct: 392 SAVALTGINYLGIKGTYTEKPIHFACSDSMPCVGVSLSTI 431
>gi|224115662|ref|XP_002317091.1| predicted protein [Populus trichocarpa]
gi|222860156|gb|EEE97703.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 48/204 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G+ +S+ + I +++++ + +++ DSPNT+GIHI S + I TGD
Sbjct: 170 VKGLTIKNSQQMNFVISKSASVRISKVTVSSPGDSPNTDGIHITQSTNVVLQDCKIGTGD 229
Query: 118 DCVSL----------------GHGISVGSLGKG---------INDEEVVGLT---VRNCT 149
DC+S+ GHG+S+GSLGK + D ++ T VR T
Sbjct: 230 DCISIVNGSSAIKMKGIYCGPGHGVSIGSLGKDNSTGIVTKVVLDTALIRETTNGVRIKT 289
Query: 150 FTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS- 198
+ G N+ +NV+NPI+IDQ YC K S V+ S + + NI GT+
Sbjct: 290 WQGGNGYVRGVRFENVRMDNVDNPIIIDQFYCDSPKSCQNQTSAVRISEIMYRNISGTTK 349
Query: 199 ---------ANKIPCQNIGIGNIN 213
++ PC I + N+N
Sbjct: 350 SAKAMKFSCSDTAPCSTIVLSNVN 373
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 5/53 (9%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYL--SIRF 50
+ NV FGAV DGI DD++AF AW AC KS LVP G +YL + RF
Sbjct: 33 LVNVDSFGAVGDGISDDTQAFVKAWGTACAIP--KSVFLVPSGRRYLVNATRF 83
>gi|356503131|ref|XP_003520365.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase
At3g15720-like [Glycine max]
Length = 472
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 103/244 (42%), Gaps = 54/244 (22%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
N N ++T + ++S HI++ GC + + I+A DSPNT+G I +S I
Sbjct: 237 INSCNSVSVTNLNMINSPKSHIHVNGCEGATFSHINISAPGDSPNTDGFDISTSKNIMIE 296
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
S IATGDDC+++ GHGIS+GSLGK + V + VRNC+F T
Sbjct: 297 DSTIATGDDCIAISGGSSYINVTGIACGPGHGISIGSLGKKF--DTVQEVYVRNCSFIRT 354
Query: 154 ----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRF 191
+I NPI+IDQ Y V+ S+V +
Sbjct: 355 TNGARIKTFPNGMGYAKQITFEDITLEQTRNPIIIDQEYRDLTN------QAVEVSDVTY 408
Query: 192 NNIRGTS----ANKIPCQNIGIGNINWVYNGVNVK--VEGPETTSLCSNVKPTLFGKQIP 245
I GTS A + C G I V + +N+ + G + C+N T
Sbjct: 409 RGIHGTSLDGRAITLDCGESGCYGI--VLDQINIVSCLTGKSASCFCNNAHGTATATNPN 466
Query: 246 ATCV 249
TC+
Sbjct: 467 CTCL 470
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
++NV DFGAV DG DD++AF AW+ C G S +L+PP K +
Sbjct: 114 IYNVIDFGAVGDGKTDDTQAFLKAWQSMCEAQG-TSTLLIPPNKVFLV 160
>gi|297739403|emb|CBI29512.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/160 (33%), Positives = 79/160 (49%), Gaps = 40/160 (25%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNN 159
GHGIS+GSLGK + +E V +TV+ TFTG+ +I+ N
Sbjct: 731 GHGISIGSLGKDLKEEGVQNVTVKTVTFTGSQNGVRIKSWARASNGFVKRVVFQHILMVN 790
Query: 160 VENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGI 209
V+NPIVIDQ YCP +K S VK S+V + +I GTSA+++ PC I +
Sbjct: 791 VQNPIVIDQNYCPGHKNCPGQVSGVKVSDVTYQDIHGTSASEVAMKFDCSSKNPCSGIKL 850
Query: 210 GNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
++ Y + + PE++ C N G PA+C+
Sbjct: 851 EDVKLTY-----RNKAPESS--CVNAGGMASGFVEPASCL 883
Score = 43.5 bits (101), Expect = 0.090, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV + GA DG D +KAF AW AC + + VPPG+YL
Sbjct: 357 YNVVNLGAKGDGHTDSTKAFLNAWAAACG-SASPATIYVPPGRYL 400
>gi|242057705|ref|XP_002457998.1| hypothetical protein SORBIDRAFT_03g025260 [Sorghum bicolor]
gi|241929973|gb|EES03118.1| hypothetical protein SORBIDRAFT_03g025260 [Sorghum bicolor]
Length = 420
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 108/287 (37%), Gaps = 121/287 (42%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYLS------------- 47
+V FGA ADG+ DD++A AWR AC ++ VL+P G ++L
Sbjct: 31 LSVLSFGAAADGVTDDAEALVAAWRVACRVP--RATVLLPSGHRFLLSPVTLQGPCSTKL 88
Query: 48 ----------IRFNFLNDSTITGIKSVDS------------------------------- 66
+ F +L D +I G +VD
Sbjct: 89 TLQPRRPLQWLNFKWLQDFSILGAGTVDGQSITSLQSASSPANNSTSQTSTGHWHSPGVK 148
Query: 67 ----RYF------------------HINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
R++ H+ +K+ ++ I++ DSPNT+GIH+ ++
Sbjct: 149 PTLIRFYNSFNVTVRNIRITNSPQCHLKFDSSGGIKVKNITISSPGDSPNTDGIHLQNTR 208
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKG-------------- 134
EI S I GDDCVS+ GHGIS+G LGK
Sbjct: 209 DVEIKSSTIGCGDDCVSIQTGCSNVHIKNVVCNPGHGISLGGLGKDYSLACVSDVVAENI 268
Query: 135 INDEEVVGL----------TVRNCTFTGTNIVTNNVENPIVIDQLYC 171
I + G+ +VRN TF +N+ NV PI IDQ YC
Sbjct: 269 IVQNALYGVRIKTWQGGVGSVRNITF--SNVRVANVATPIAIDQFYC 313
>gi|356503135|ref|XP_003520367.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 452
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 103/244 (42%), Gaps = 54/244 (22%)
Query: 50 FNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109
N N ++T + ++S HI++ GC + + I+A DSPNT+G I +S I
Sbjct: 217 INSCNSVSVTNLNMINSPKSHIHVNGCEGATFSHINISAPGDSPNTDGFDISTSKNIMIE 276
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
S IATGDDC+++ GHGIS+GSLGK + + V VRNC+F T
Sbjct: 277 DSTIATGDDCIAISGGSSYINVTGIACGPGHGISIGSLGKKFDTVQEV--YVRNCSFIRT 334
Query: 154 ----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRF 191
+I NPI+IDQ Y V+ S+V +
Sbjct: 335 TNGARIKTFPNGMGYAKQITFEDITLEQTRNPIIIDQEYRDLTN------QAVEVSDVTY 388
Query: 192 NNIRGTS----ANKIPCQNIGIGNINWVYNGVNVK--VEGPETTSLCSNVKPTLFGKQIP 245
I GTS A + C G I V + +N+ + G + C+N T
Sbjct: 389 RGIHGTSLDGRAITLDCGESGCYGI--VLDQINIVSCLTGKSASCFCNNAHGTATATNPN 446
Query: 246 ATCV 249
TC+
Sbjct: 447 CTCL 450
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFL 53
++NV DFGAV DG DD++AF AW+ C G S +L+PP K + L
Sbjct: 94 IYNVIDFGAVGDGKTDDTQAFLKAWQSMCEAQG-TSTLLIPPNKVFLVTSMLL 145
>gi|255576392|ref|XP_002529088.1| conserved hypothetical protein [Ricinus communis]
gi|223531439|gb|EEF33272.1| conserved hypothetical protein [Ricinus communis]
Length = 307
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 121/268 (45%), Gaps = 64/268 (23%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSIRFNFLNDSTITG 60
FNV +GA DG D +KAF TAW +AC + A++ VPPG++L + F
Sbjct: 24 FNVLSYGANPDGRTDCTKAFLTAWTQAC--ASTRPAIISVPPGRFLVSKLLFQGPCKNNA 81
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKITAHADS----PNTEGIHI--GSSNGSEIS-HSVI 113
+ +++ G + +D T +A + +G+ I G +G +S S
Sbjct: 82 V--------LLSVDGSTLVAPSDYWATGNAQNWLIFEYVDGVTISGGILDGQGMSLWSCK 133
Query: 114 ATGDDC----VSLGHG-------ISVGSLGKGINDEEVVGLTVRNCTFTGT--------- 153
A+G C SLG I +GSLGK + + V +TV+ FTGT
Sbjct: 134 ASGKKCPTGATSLGFSNSNNIAIIGIGSLGKDLQEAGVQNVTVKTAKFTGTQNGLRIKSW 193
Query: 154 ---------NIVTN-----NVENPIVIDQLYCPYNK-CNIKVPSQVKTSNVRFNNIRGTS 198
NI+ +V+NPIVIDQ YCP+NK C +V S V+ S V + +I GTS
Sbjct: 194 GRPSNGFARNILFQHATMIDVKNPIVIDQNYCPHNKNCPGQV-SGVQISGVTYQDIHGTS 252
Query: 199 A----------NKIPCQNIGIGNINWVY 216
A K PC I + +I Y
Sbjct: 253 ATEVAVRFDCSKKTPCTGIKMEDIRLTY 280
>gi|4056431|gb|AAC98004.1| Similar to gb|AJ002532 endo-polygalacturonase from Arabidopsis
thaliana and is a member of the polygalacturonase family
PF|00295 [Arabidopsis thaliana]
Length = 457
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 52/206 (25%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
++G+ +S+ + I +++++ + +++ DSPNT+GIHI S + I TGD
Sbjct: 200 VSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNVILQDCKIGTGD 259
Query: 118 DCVSL----------------GHGISVGSLGK----GINDEEVV----------GLTVRN 147
DCVS+ GHGIS+GSLGK GI + V+ GL ++
Sbjct: 260 DCVSIVNASSNIKMKNIYCGPGHGISIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIK- 318
Query: 148 CTFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT 197
T+ G TN+ +V NPI+IDQ YC S VK S + + NI GT
Sbjct: 319 -TYQGGSGYVQGIRFTNVEMQDVANPILIDQFYCDSPTTCQNQTSAVKISQIMYRNITGT 377
Query: 198 S----------ANKIPCQNIGIGNIN 213
+ ++ +PC +I + N+N
Sbjct: 378 TKSAKAIKFACSDTVPCSHIVLNNVN 403
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYL--SIRFN 51
+ NV FGA DG+ DD++AF +AW +AC+ KS LVP G +YL + +FN
Sbjct: 65 LVNVDTFGAAGDGVSDDTQAFVSAWSKACSTS--KSVFLVPEGRRYLVNATKFN 116
>gi|145336060|ref|NP_173760.2| polygalacturonase [Arabidopsis thaliana]
gi|332192268|gb|AEE30389.1| polygalacturonase [Arabidopsis thaliana]
Length = 460
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 98/206 (47%), Gaps = 52/206 (25%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
++G+ +S+ + I +++++ + +++ DSPNT+GIHI S + I TGD
Sbjct: 203 VSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNVILQDCKIGTGD 262
Query: 118 DCVSL----------------GHGISVGSLGK----GINDEEVV----------GLTVRN 147
DCVS+ GHGIS+GSLGK GI + V+ GL ++
Sbjct: 263 DCVSIVNASSNIKMKNIYCGPGHGISIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIK- 321
Query: 148 CTFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT 197
T+ G TN+ +V NPI+IDQ YC S VK S + + NI GT
Sbjct: 322 -TYQGGSGYVQGIRFTNVEMQDVANPILIDQFYCDSPTTCQNQTSAVKISQIMYRNITGT 380
Query: 198 S----------ANKIPCQNIGIGNIN 213
+ ++ +PC +I + N+N
Sbjct: 381 TKSAKAIKFACSDTVPCSHIVLNNVN 406
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYL--SIRFN 51
+ NV FGA DG+ DD++AF +AW +AC+ KS LVP G +YL + +FN
Sbjct: 66 LVNVDTFGAAGDGVSDDTQAFVSAWSKACSTS--KSVFLVPEGRRYLVNATKFN 117
>gi|224120760|ref|XP_002318410.1| predicted protein [Populus trichocarpa]
gi|222859083|gb|EEE96630.1| predicted protein [Populus trichocarpa]
Length = 189
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 43/164 (26%)
Query: 123 GHGISVGSLGKGINDEE---VVGLTVRNCTFTGT-----------------------NIV 156
GHGI GS+G+ + ++ +VGLTVRNCTF T +I
Sbjct: 31 GHGIGAGSMGENTSLDKKDILVGLTVRNCTFANTSDGVRIKTWESPHEGVASGFTYEDIT 90
Query: 157 TNNVENPIVIDQLYCPYNKCNIKVPSQVK-----------TSNVRFNNIRGTSANKIPCQ 205
+ V++PI IDQ YCP+ C+ + PS ++ TS +R + ++ PC+
Sbjct: 91 MDGVQHPINIDQHYCPFPLCDTRTPSHIQLKILYTITLGVTSKLR-TAVSLNCSSVHPCE 149
Query: 206 NIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
NI + +IN VY G EGP +LCSN+ +L G Q P +C+
Sbjct: 150 NIVLTDINLVYKG----KEGP-AIALCSNIHGSLSGIQKPPSCL 188
>gi|22329091|ref|NP_194963.2| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332660647|gb|AEE86047.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 342
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 20/128 (15%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I F D G+ ++S HI+I GC N L++L I+A DSPNT+GI+I S+
Sbjct: 157 TISFASCMDIVYNGLHHINSPRNHISIYGCTNATLSNLDISAPEDSPNTDGINICLSHRI 216
Query: 107 EISHSVIATGDDCVSL-------------------GHGISVGSLGKGINDEEVV-GLTVR 146
+I S I TGDDCV++ GHGIS+GSLGK +++V + VR
Sbjct: 217 QILDSSIQTGDDCVAITGGRGGSSDINITGVACGPGHGISIGSLGKDNERDDIVENVNVR 276
Query: 147 NCTFTGTN 154
+C+FTGT
Sbjct: 277 SCSFTGTQ 284
>gi|47900290|gb|AAT39158.1| putative polygalacturonase [Oryza sativa Japonica Group]
gi|51854308|gb|AAU10689.1| putative polygalacturonase [Oryza sativa Japonica Group]
Length = 571
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 97/233 (41%), Gaps = 76/233 (32%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF ++ T+TGI V+S H+ C + ++DL I++ +SPNT+GIH
Sbjct: 264 MPQIKPTALRFYGSSNVTVTGITIVNSSQCHLKFDSCQGVMVHDLTISSPENSPNTDGIH 323
Query: 100 IGSSNGSEISHSVIA-------------------------------------TGDDCVSL 122
+ +S I HS +A GDDCVS+
Sbjct: 324 LQNSKQVSIHHSNLACGNALINSIKAKPTGFRTKGKLKTLVQVSEVIFALCDAGDDCVSI 383
Query: 123 ----------------GHGISVGSLGKGINDEEVVGLTVRNC----TFTG---------- 152
GHGIS+G LG+ V +TVR+ T TG
Sbjct: 384 QTGCSDINIHNVNCGPGHGISIGGLGRYNTKACVSNVTVRDVNMFKTMTGVRIKTWQGGS 443
Query: 153 --------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT 197
+NI + V+ PI+IDQ YC C + S V V++ NIRGT
Sbjct: 444 GLVQGIRFSNIQVSEVQTPIIIDQFYCDRTTCRNQT-SAVAVLGVQYENIRGT 495
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
VFNV DFGA DG+ DD++AFE AW AC + S VLVP
Sbjct: 133 VFNVVDFGARGDGVTDDTQAFEEAWAAACKVEA--STVLVP 171
>gi|357470583|ref|XP_003605576.1| hypothetical protein MTR_4g034020 [Medicago truncatula]
gi|355506631|gb|AES87773.1| hypothetical protein MTR_4g034020 [Medicago truncatula]
Length = 373
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 89/184 (48%), Gaps = 40/184 (21%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G ++S HI+I ++ + + ITA +SPNT+GI IG S+ I S IATGD
Sbjct: 133 LNGTHHLNSARNHISIDYSDHVNIFKINITAPQESPNTDGIDIGHSSYVLIQDSTIATGD 192
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+++ GHGISVGSLG+ E V + V+NCTF T
Sbjct: 193 DCIAMNNGTSNINITGVTCGPGHGISVGSLGENGAYEIVEQVYVKNCTFIRTENGMRIKT 252
Query: 154 --------------NIVTNNVENPIVIDQLYCPY--NKCNIKVPSQVKTSNVRFNNIRGT 197
I+ +NPI+IDQ Y +K N S+V+ S V + ++ GT
Sbjct: 253 WPGGSGYARNISFEQIILTETKNPIIIDQNYRDLVIDKANNMQKSEVQISGVTYRDVIGT 312
Query: 198 SANK 201
S +K
Sbjct: 313 SNSK 316
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 6 DFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
D+GAV DG+ DDS+ F W + C D +LVP GK
Sbjct: 2 DYGAVGDGLTDDSQVFLKVWNDICKRDSDTPTLLVPSGK 40
>gi|157165828|gb|ABV25003.1| polygalacturonase 6 [Oncidium Gower Ramsey]
Length = 483
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 39/200 (19%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF + T+TGI +S H+ C + + ++ +T+ D NT+GIH
Sbjct: 214 MPSIKPTALRFYGSYNVTVTGITIQNSPQCHLKFDNCEAVHVYNMSVTSPGDILNTDGIH 273
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ +S I H ++ GDDCVS+ GHGIS+G LG+ V +
Sbjct: 274 LQNSKDVVIHHCNLSCGDDCVSIQTGCNGVKIHNVNCGPGHGISIGGLGRDNTKACVSNI 333
Query: 144 TVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVP 181
TV++ GT NI + V+ PIVIDQ YC + C +
Sbjct: 334 TVQDVNMYGTMTGVRIKTWQGGSGSVQSIRFSNIRVSEVQTPIVIDQFYCDRSSCKNQT- 392
Query: 182 SQVKTSNVRFNNIRGTSANK 201
+ V S + + +I+GT K
Sbjct: 393 AAVALSGIAYESIKGTYTVK 412
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
+ NV DFGA DG+ DD+KAFE AW AC ++++ + P Y
Sbjct: 88 MLNVLDFGAKGDGVTDDTKAFEDAWMSACQ---VEASTMQIPSDY 129
>gi|224133792|ref|XP_002321662.1| predicted protein [Populus trichocarpa]
gi|222868658|gb|EEF05789.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 95/221 (42%), Gaps = 48/221 (21%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G+ DS H+ + ++L I A DSPNT+GIH+ + I +S I TGD
Sbjct: 151 LEGLTFKDSPQMHMAFERSEWVYASNLTIQAPGDSPNTDGIHLQHAKNIFIDYSRIMTGD 210
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVE 161
DC+S+ GHGIS+GSLG E V + V + FT T
Sbjct: 211 DCISIGDGSSQINITRIACGPGHGISIGSLGIDGESETVEDVHVSDVVFTETT------- 263
Query: 162 NPIVIDQLYCPYNKCNIKV--PSQVKTSNVRFNNIRGTSANK----------IPCQNIGI 209
N IK S V+ S +RF NI GTS K +PC +I +
Sbjct: 264 ------------NGARIKTWQSSAVEISKIRFENIYGTSHRKPAVHIACSKSVPCTDIVL 311
Query: 210 GNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPA-TCV 249
N++ +G E ++ C+NV+ G+ P TC+
Sbjct: 312 SNVHLEAADDGDGDDGDEPSTYCANVQGHAMGRVFPPLTCL 352
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VPPGKYLSIR 49
V+NV D+GAV DG DD++AF+ AW++ C ++ VP GK ++
Sbjct: 25 VYNVIDYGAVGDGDTDDTQAFKDAWKDVCKSSSCSVPIIQVPSGKSFLLQ 74
>gi|15242508|ref|NP_198807.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
gi|332007107|gb|AED94490.1| glycoside hydrolase family 28 protein / polygalacturonase
(pectinase) family protein [Arabidopsis thaliana]
Length = 373
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 84/182 (46%), Gaps = 43/182 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
I+ I DS F +++ + + L ITA DSPNT+GIHI S + S I TGD
Sbjct: 159 ISNIMVKDSPNFQMSLEDSKWVIVKQLTITADGDSPNTDGIHIQRSQNVIVYDSNIRTGD 218
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVE 161
DC+S+ GHGIS+GSLG+ E V + VR+CTF T TN V
Sbjct: 219 DCISIGDGSKYINISRISCGPGHGISIGSLGRYGTKETVENVVVRDCTFRET---TNGV- 274
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
+ V+ NV FN+I GTS K +PC++I + +
Sbjct: 275 -------------RIKTWQTKAVEIKNVMFNHIHGTSIKKPFVQLLCSKSVPCRDIFMND 321
Query: 212 IN 213
IN
Sbjct: 322 IN 323
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV ++GA+ DG DDSKAF+ AW + CN+ G +S + +P G
Sbjct: 35 IFNVLNYGAIGDGFSDDSKAFKDAWEDTCNYIGSESIMEIPEG 77
>gi|449458389|ref|XP_004146930.1| PREDICTED: probable polygalacturonase At3g15720-like [Cucumis
sativus]
Length = 330
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 89/188 (47%), Gaps = 40/188 (21%)
Query: 45 YLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSN 104
+ ++ F+ N + G+K ++S HI+I C+++ + L I+A DSPNT+GI I S
Sbjct: 132 WKALFFHNCNGLQMKGMKHINSAKNHISINMCHDVIFSHLHISAPEDSPNTDGIDISEST 191
Query: 105 GSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC 148
I S +ATGDDC+++ GHGIS+GSLGK V + V NC
Sbjct: 192 NIFIEDSFMATGDDCIAINNGSSNININGITCGPGHGISIGSLGKDGEYNVVENVHVSNC 251
Query: 149 TFTGTN----------------------IVTNNVENPIVIDQLYCPYNKCN-IKVPSQVK 185
T I N +NPI+IDQ Y Y +KV ++
Sbjct: 252 LLRSTQNGIRIKTWEGGYGYAKNITFEKITMKNAKNPIIIDQYYSSYAYSRKMKVMLILR 311
Query: 186 TS-NVRFN 192
++ ++RFN
Sbjct: 312 SNGHLRFN 319
>gi|449471875|ref|XP_004153433.1| PREDICTED: polygalacturonase-like, partial [Cucumis sativus]
Length = 167
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 75/160 (46%), Gaps = 39/160 (24%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCT-FTGTN----------------------IVTNN 159
GHG+SVGSLGK ++ V + V+NCT F TN IV N
Sbjct: 14 GHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVSGLASRIIFEDIVMYN 73
Query: 160 VENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGI 209
V+NPI+IDQ Y K S K SNV+F NIRGTS + PC+ + +
Sbjct: 74 VKNPIIIDQTY----GTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFPCEGVEL 129
Query: 210 GNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
+IN Y G N++ S CSN K FG Q P CV
Sbjct: 130 RDINLSYGGTNLR--NTTIVSSCSNAKIATFGVQNPPPCV 167
>gi|356522922|ref|XP_003530091.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 543
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 49/228 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ F N +++ + ++S HI I C +++ I A +SPNT+GI I SS
Sbjct: 303 LSFQSCNRLSVSYLNIINSPRAHIGINQCQGAIFSNINIHAPGNSPNTDGIDINSSQNIM 362
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I S IA+GDDC+++ GHGIS+GSLG+ N + + + V+NC FT
Sbjct: 363 IRDSFIASGDDCIAITGSSSYINVTGIDCGPGHGISIGSLGR--NYDTIQEVHVQNCKFT 420
Query: 152 GT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T I NPI+IDQ Y + +V+ S+V
Sbjct: 421 STTNGARIKTFAGGSGYAKRITFEEITLIQARNPIIIDQFYVGEDDL---TNGEVQVSDV 477
Query: 190 RFNNIRGT----SANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCS 233
F RGT A + C +G NI + + N+ P + CS
Sbjct: 478 TFRGFRGTCTYDQAIDLSCGPLGCFNI--ILDQNNIVSSQPGKQAYCS 523
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK 44
++NV ++GA DG DDS+AF AW+ C G + +L+PP +
Sbjct: 183 IYNVINYGAKGDGRSDDSQAFLRAWQSTCGAQG-AATLLIPPNR 225
>gi|357132727|ref|XP_003567980.1| PREDICTED: probable polygalacturonase At1g80170-like [Brachypodium
distachyon]
Length = 454
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 108/258 (41%), Gaps = 54/258 (20%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
P ++ F + T+ GI +S H+ C +K N L++TA DSP T G +
Sbjct: 170 PAAAPKAVHFEDCKEITVMGITVQNSPREHLAFTRCSVVKANYLRVTAPVDSPGTVGALL 229
Query: 101 GSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLT 144
+S+ I + + G DCVS+ GHGIS+G LG+ + ++ +
Sbjct: 230 VNSSDVRIMDDLFSVGGDCVSMVGRCRDVRLRAVSCGPGHGISIGGLGENGSLHKIEKIK 289
Query: 145 VRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNK-CNIKVP 181
+ FT T +I+ NV +PIVIDQ Y N+ + + P
Sbjct: 290 MDTLFFTNTKYGLRIKTHEDGCGFVRKVKFAHILMRNVSDPIVIDQHYSYSNQGTSCEFP 349
Query: 182 SQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSL 231
+ + +N+I GTSA + +PC+ + + +N G G ++
Sbjct: 350 NVTLVEKIEYNDITGTSATEQAVKFACSDTMPCRRLSMSGVNLTMAG-----GGGNVSAY 404
Query: 232 CSNVKPTLFGKQIPATCV 249
C+ FG +P +C+
Sbjct: 405 CNQAFGRNFGAIVPDSCL 422
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREAC 29
+ + DFGAV DGI +D++AF AW AC
Sbjct: 30 LLTLADFGAVGDGIANDTQAFLDAWAAAC 58
>gi|297845406|ref|XP_002890584.1| F28C11.9 [Arabidopsis lyrata subsp. lyrata]
gi|297336426|gb|EFH66843.1| F28C11.9 [Arabidopsis lyrata subsp. lyrata]
Length = 1134
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 60/220 (27%), Positives = 93/220 (42%), Gaps = 64/220 (29%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
++G+ +S+ + I +++++ + +++ DSPNT+GIHI S + I TGD
Sbjct: 861 VSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNVILQDCKIGTGD 920
Query: 118 DCVSL----------------GHGISVGSLGK----GINDEEVVGLTVRNCTFTGTNIVT 157
DCVS+ GHGIS+GSLGK GI + V+ + T G I T
Sbjct: 921 DCVSIVNASSNIKMKNIYCGPGHGISIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIKT 980
Query: 158 ----------------------------------NNVENPIVIDQLYCPYNKCNIKVPSQ 183
+V NPI+IDQ YC S
Sbjct: 981 YQVKKLQSLRKTSIWLDREQFYFIVYLSNREVLMQDVANPILIDQFYCDSPTTCQNQTSA 1040
Query: 184 VKTSNVRFNNIRGTS----------ANKIPCQNIGIGNIN 213
VK S + + NI GT+ ++ +PC +I + N+N
Sbjct: 1041 VKISQIMYRNITGTTKSEKAIKFACSDTVPCSHIVLNNVN 1080
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYL--SIRFN 51
NV FGA DG+ DD++AF +AW +AC KS LVP G +YL + +FN
Sbjct: 704 NVDTFGAAGDGVSDDTQAFISAWSKACGTS--KSVFLVPEGRRYLVNATKFN 753
>gi|302796826|ref|XP_002980174.1| hypothetical protein SELMODRAFT_112735 [Selaginella moellendorffii]
gi|300151790|gb|EFJ18434.1| hypothetical protein SELMODRAFT_112735 [Selaginella moellendorffii]
Length = 456
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 51/221 (23%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++RF ++ + + V+S H+ C + +N++ I++ SPNT+GIH+
Sbjct: 187 PALAQAVRFFGSSNVVVQHLAIVNSPQTHLKFDSCQGVVVNNVTISSPYTSPNTDGIHLQ 246
Query: 102 SSNGSEISHSVI--ATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ + + S + GDDCVS+ GHGIS+G LG+G V +
Sbjct: 247 DTRYAAVRSSRVLCCAGDDCVSIQTGCSNIEIFDMMCGPGHGISIGGLGRGGTKACVSDV 306
Query: 144 T------------VRNCTFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
+ VR T+ G NI NV NPIVIDQ YC C+ +
Sbjct: 307 SVHDVVVHTSQNGVRIKTWQGGSGSVSSVHFHNIAVLNVSNPIVIDQFYCDGRSCHNQT- 365
Query: 182 SQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNI 212
S V S+V + NIRGT K +PC I + N+
Sbjct: 366 SGVSISDVSYKNIRGTYTQKSNIHFACSDSVPCVGIVVANV 406
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+++V FGA DG+ DD+ AF AW +AC ++S+++ P ++
Sbjct: 68 IYDVLSFGAKGDGVTDDTHAFLAAWNQACK---VESSMVEVPANFV 110
>gi|449435398|ref|XP_004135482.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
gi|449516643|ref|XP_004165356.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus]
Length = 467
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 48/217 (22%)
Query: 44 KYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSS 103
K ++RF + T+ I ++S H+ +K++++ I++ +SPNT+GIH+ ++
Sbjct: 198 KPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGTVKIDNITISSPENSPNTDGIHLQNT 257
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRN 147
EI HS I GDDCVS+ GHGIS+G LGK + V + V N
Sbjct: 258 RDVEIQHSNIGCGDDCVSIQTGCSNIHIHHINCGPGHGISLGGLGKDKSAACVSNIVVEN 317
Query: 148 CTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
+ T NI ++V+ PI+IDQ YC +KC + + V
Sbjct: 318 ISIQNTLSGVRIKTWQGGIGSVKNVSFSNIQVSDVKVPIMIDQYYCDKSKCKNQTGA-VA 376
Query: 186 TSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
S + ++ I G+ +++IPC ++ + +I
Sbjct: 377 ISGITYDQIIGSYSVQPIHLACSSQIPCVDVDLIDIQ 413
>gi|405779218|gb|AFS18538.1| PG2, partial [Cucurbita pepo subsp. pepo]
Length = 171
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 56/177 (31%)
Query: 114 ATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCTFTGT---- 153
TGDDC+S+G HGIS+GSLGK + ++ V +TV++C F T
Sbjct: 1 GTGDDCISIGPGTSNLWIENVACGPGHGISIGSLGKALKEDGVQNVTVKSCRFMNTQNGV 60
Query: 154 -------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNI 194
++ NV+NPI+IDQ YCP+NK S +K S+V + +I
Sbjct: 61 RIKSWGRPSSGFARNIRFQHLKMTNVKNPIIIDQNYCPHNKDCPGQASGIKVSDVTYQDI 120
Query: 195 RGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
GT+A K PC I + ++ Y K +LCS+V+ T+ G
Sbjct: 121 HGTTATKFALTFDCSPKFPCVGIRLEDVKLSYKNGAAK-------ALCSHVRGTVTG 170
>gi|356503153|ref|XP_003520376.1| PREDICTED: uncharacterized protein LOC100782390 [Glycine max]
Length = 760
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 80/191 (41%), Gaps = 46/191 (24%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
I F ND T+ + +S HI I GC +++ I A +SPNT+G I S
Sbjct: 523 ISFVSCNDLTVRKLSISNSPRAHITIDGCNGAIFSNINIHAPRNSPNTDGFDIAFSKNIL 582
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I IATGDDC+++ GHGIS+GSLGK E V + V NC+FT
Sbjct: 583 IEDCTIATGDDCIAINGGSSYINATGIACGPGHGISIGSLGKHNAHETVEEIYVYNCSFT 642
Query: 152 GT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T I NPI++DQ Y V+ S V
Sbjct: 643 KTTNGARIKTVPGGTGYAKRITFEKIKLIQTRNPIILDQFY--------HSTGVVQVSEV 694
Query: 190 RFNNIRGTSAN 200
+ +GTSAN
Sbjct: 695 TYRGFQGTSAN 705
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
+NV DFGA +G DDS AF +AW+ C G + V+ P G +L
Sbjct: 404 YNVMDFGAHGNGKSDDSHAFSSAWQHTCGTQGTSTLVIPPKGVFL 448
>gi|357437099|ref|XP_003588825.1| Polygalacturonase [Medicago truncatula]
gi|355477873|gb|AES59076.1| Polygalacturonase [Medicago truncatula]
Length = 394
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 101/233 (43%), Gaps = 57/233 (24%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W+ + + P +++F+ + I G+ ++ HI ++ ++ ++ + I +
Sbjct: 135 WESREKGIGGCPRIPTALQFDKCDGLQINGLTHINGPGAHIAVIDSQDITISHIHINSPK 194
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKG 134
S NT+GI + + G I I +GDDC+++ GHGISVGSLG
Sbjct: 195 KSHNTDGIDLTRTIGVNIHDIQIESGDDCIAVKGGSQFVNVSNVTCGPGHGISVGSLGGH 254
Query: 135 INDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCP 172
++E V +V+NCTF G +I+ N P+ IDQ Y
Sbjct: 255 GSEEFVQHFSVKNCTFNGADSAVKIKTWPGGKGYAKHIIFEDIIINQTNYPVFIDQHY-- 312
Query: 173 YNKCNIKVPSQ---VKTSNVRFNNIRGT---------SANKIPCQNIGIGNIN 213
++ P Q VK SN+ F+NI GT KI C NI + IN
Sbjct: 313 -----MRTPEQHQAVKISNITFSNIYGTCIGEDAVVLDCAKIGCYNITLNQIN 360
>gi|449464134|ref|XP_004149784.1| PREDICTED: exopolygalacturonase clone GBGE184-like [Cucumis
sativus]
Length = 455
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 67/127 (52%), Gaps = 39/127 (30%)
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGI 126
++KI A +SPNT+G+H+ +S I++SVI TGDDCVS+ GHG+
Sbjct: 318 NMKIIAPHNSPNTDGMHLSTSKLVTIANSVIGTGDDCVSIGHSTENITVTNVTCGPGHGL 377
Query: 127 SVGSLGKGINDEEVVGLTVRNCT-FTGTN----------------------IVTNNVENP 163
SVGSLGK ++ V + V+NCT F TN IV NV+NP
Sbjct: 378 SVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVSGLASRIIFEDIVMYNVKNP 437
Query: 164 IVIDQLY 170
I+IDQ Y
Sbjct: 438 IIIDQTY 444
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VF+V GA A+G DD++AF T W AC + L+P G +L
Sbjct: 83 VFDVTKHGAKANGKTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFL 128
>gi|356562018|ref|XP_003549272.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 490
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 55/216 (25%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F + I+G+ ++ HI ++ ++ ++++ I + +S NT+GI + +S
Sbjct: 247 ALLFQRCDGLQISGLTHINGPGSHIFVVHSQDITISNIDIYSPLESHNTDGIDLTNSVRV 306
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I S+I TGDDC+++ GHGISVGS+G+G +E V + V NC F
Sbjct: 307 NIRDSIIRTGDDCIAMKGGSKFININNVTCGPGHGISVGSIGQGGQEEFVENVNVSNCIF 366
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYC--PYNKCNIKVPSQVKT 186
G NI N + PI + Q Y P K VK
Sbjct: 367 NGASSAARIKTWPGGKGYAKNIAFQNISVNQTDYPIYLSQHYMGTPEKK------DAVKV 420
Query: 187 SNVRFNNIRGTSAN---------KIPCQNIGIGNIN 213
S+V F+NI GT + KI C NI + IN
Sbjct: 421 SDVTFSNIHGTCISENAVVLDCAKIGCDNIALKQIN 456
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
F+V ++GA +G DD+ AF AW+ C S ++VP G +R
Sbjct: 124 FDVLNYGAKGNGRSDDTNAFVQAWKALCGASNGTSTLVVPAGHTFFVR 171
>gi|356511674|ref|XP_003524548.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like
[Glycine max]
Length = 441
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 53/230 (23%)
Query: 34 IKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSP 93
++S+ +P + ++RF +TGI +S+ H+ C ++++ D+ +++ DSP
Sbjct: 166 VESSGRLPSTRPTALRF--YGSDXVTGITIQNSQQTHLKFDSCTHVQVYDINVSSPGDSP 223
Query: 94 NTEGIHIGSSNGSEISHSVIATGDDCV-------------------SLGHGISVGSLGKG 134
T+GIH+ +S G I S +A+G+D GHGIS+GSLGK
Sbjct: 224 KTDGIHLQNSQGVVIYSSTLASGNDNTMGILFAMILSDIYVHNVNCGPGHGISIGSLGKE 283
Query: 135 INDEEVVGLTVRNC----TFTGTNIVT------------------NNVENPIVIDQLYCP 172
V +TV++ T TG I T + V+ PI+IDQ YC
Sbjct: 284 NTKACVRNVTVQDVTIQNTLTGVRIXTWQGGSGSVQNIMFSHVQVSGVKTPILIDQYYCE 343
Query: 173 YNKCNIKVPSQVKTSNVRFNNIRGTS---------ANKIPCQNIGIGNIN 213
K + S + S++ + NI+GT ++ +PC I + I
Sbjct: 344 GGKRGNE-SSAMAVSSIHYVNIKGTYTKVPIYFACSDNLPCTGITLDTIQ 392
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
FNV D+GA DG DD+KAFE AW AC +G S ++VP
Sbjct: 46 FNVLDYGAKGDGHADDTKAFEDAWAAACKVEG--STMVVP 83
>gi|384496095|gb|EIE86586.1| hypothetical protein RO3G_11297 [Rhizopus delemar RA 99-880]
Length = 386
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 95/195 (48%), Gaps = 46/195 (23%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI----TAHADSPNTEGIHIGSS 103
+RF L DS ++GIK V++ H+ + C N L+++ + T+ + NT+ + + SS
Sbjct: 138 LRF-ALTDSKVSGIKIVNAPRAHLGVTNCENFVLDNITLKTASTSSKLAKNTDALDVSSS 196
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR- 146
+G +S + GDDC+++ GHG SVGSLGKG E V + +R
Sbjct: 197 SGIVFQNSELTVGDDCLAINGGVTNITLSKITCNGGHGFSVGSLGKGGKSETVKTVRIRD 256
Query: 147 ----NC-------TFTG----------TNIVTNNVENPIVIDQLYCPYNK---CNIKVPS 182
NC T+ G +NI NNV+NPI+I YC N+ CN S
Sbjct: 257 SVCNNCQNGVRIKTWPGGKGAVSDVEYSNIKLNNVDNPILITTHYCDQNQQSYCNGNDGS 316
Query: 183 QVKTSNVRFNNIRGT 197
+ S+V +++ G+
Sbjct: 317 SLSISDVTISDVTGS 331
>gi|258640138|gb|ACV85695.1| ripening-induced polygalacturonase 2 [Carica papaya]
Length = 494
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 113/270 (41%), Gaps = 63/270 (23%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
WR +C P + ++ F + + +K D++ ++ C + +DL
Sbjct: 227 WRNSCK---------APCKEAPTVTFYKCKNLMVRNVKVQDAQQMQVSFEKCSEVTASDL 277
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISV 128
+TA SPNT+GIH+ ++ I+++ I GDDC+S+ GHGI+V
Sbjct: 278 TVTAPEKSPNTDGIHVTNTQNILITNTFIG-GDDCISIESGSHNVQIEELTCGPGHGINV 336
Query: 129 GSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIVI 166
SLG + V +TV +GT N+ NV+NPI+I
Sbjct: 337 DSLGDNNSKAFVSFVTVNGAKLSGTTNGVRIKTYQGGSGSASNIKFQNVDMENVKNPIII 396
Query: 167 DQLYCP-YNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWV 215
DQ YC C + S V+ +V + NI+G SA+ + PC + + N+
Sbjct: 397 DQNYCDQKKPCKKQQKSAVQVKDVLYQNIQGNSASDVAIDFDCSENYPCLGVKLQNVRL- 455
Query: 216 YNGVNVKVEGPETTSLCSNVKPTLFGKQIP 245
E ++C++V+ T G P
Sbjct: 456 ---QRADRVDEEAKAICNHVELTETGVVFP 482
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 5/54 (9%)
Query: 1 VFNVKDFGAVADGIKDDSKA-FETAWREACNWDGIKSAVLVPPGK-YL--SIRF 50
+FNV DFGA DGI DD++ FE AW +AC++ G + LVP + YL IRF
Sbjct: 116 IFNVDDFGAEGDGIHDDTQQVFEEAWEKACSYKG-PALFLVPERRTYLIGPIRF 168
>gi|357128629|ref|XP_003565973.1| PREDICTED: probable polygalacturonase At1g80170-like [Brachypodium
distachyon]
Length = 429
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 56/265 (21%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
+ V+D G+ D + W ++C P ++ F + + G+
Sbjct: 116 YRVQDLSVSGGGVIDGRG--QQWWEQSCKGKHHALQHCTPQAAPKALHFEECHGVRVQGV 173
Query: 62 KSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
+S+ H+ C N + + L++++ SP T+GIH+ S +++ ++I+TG DCVS
Sbjct: 174 TVQNSQQQHLTFTRCTNARASFLRVSSPESSPATDGIHLVDSKNVQLADNLISTGGDCVS 233
Query: 122 L----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------ 153
+ G GIS+G++G+ + + + + T T
Sbjct: 234 MVGNCTDVRLRSISCGPGSGISIGTIGETPAADRLEKIKIDTVFMTNTSNGVRIKTWQDG 293
Query: 154 ----------NIVTNNVENPIVIDQLYC---PYNKCNIKVP--SQVKTSNVRFNNIRGTS 198
+I NV NPIVIDQ P C P S V + + I GTS
Sbjct: 294 CGYARKVKFQSIAMKNVSNPIVIDQYRTSSHPAVPCG-STPGMSAVAVEKIDYEGIAGTS 352
Query: 199 ANK----------IPCQNIGIGNIN 213
A K +PC+ + + N+N
Sbjct: 353 ATKRAVTFACSVAVPCRRVSLRNVN 377
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREAC-NWDGIKSAVLVPPGKYLSI 48
+ +V DFGAV DGI DD++A AW AC D K+ + VP G+ +
Sbjct: 28 LLSVDDFGAVGDGIADDTQALLDAWNAACATLD--KTVLNVPAGRSYQV 74
>gi|22424|emb|CAA40803.1| polygalacturonase [Zea mays]
Length = 180
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 55/176 (31%)
Query: 116 GDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNCTFTGT------ 153
GDDC+S+G HGIS+GSLG+ ++++V + V++CT T
Sbjct: 2 GDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRI 61
Query: 154 ------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIR 195
NI + NPI ID YCP C S+V +V F NI
Sbjct: 62 KAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNIT 121
Query: 196 GTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
GTS+ K+PC + + ++N Y+G N K T ++C+N K + G
Sbjct: 122 GTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAKGSTKG 172
>gi|255579187|ref|XP_002530440.1| polygalacturonase, putative [Ricinus communis]
gi|223530026|gb|EEF31950.1| polygalacturonase, putative [Ricinus communis]
Length = 216
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 78/155 (50%), Gaps = 43/155 (27%)
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
+ A +SPNT+GI I +S+ I +S+I+TGDDC+++ GHGISVG
Sbjct: 1 MIAPEESPNTDGIDISASSHINIRNSLISTGDDCIAINGFTSNINISGVLCGPGHGISVG 60
Query: 130 SLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIV 165
SLGK E V + V NCTF GT N++ + +NPI+
Sbjct: 61 SLGKNGAYETVEDIHVENCTFNGTQNGVRIKTWPGGSGYARRISFEQINLIAS--QNPII 118
Query: 166 IDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN 200
IDQ Y + + + S V S+V + IRGTSA+
Sbjct: 119 IDQNYWDHFQYG-RESSDVHISDVTYREIRGTSAD 152
>gi|147782807|emb|CAN63436.1| hypothetical protein VITISV_021123 [Vitis vinifera]
Length = 418
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 38/175 (21%)
Query: 40 VPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIH 99
+P K ++RF D T+ I+ ++S H+ + + ++ I++ +SPNT+GIH
Sbjct: 159 IPNMKPTALRFYASYDVTVCNIRIINSPQCHLKFDNSGRVNVTNITISSPENSPNTDGIH 218
Query: 100 IGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL 143
+ ++ EI HS I GDDCVS+ GHGIS+G LGK + V L
Sbjct: 219 LQNTQDVEIQHSNIGCGDDCVSIQTGCSNVHVHHINCGPGHGISLGGLGKEKSAACVSNL 278
Query: 144 TVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNKC 176
V N T+ G +NI ++V+ PI+IDQ YC + C
Sbjct: 279 VVDNISVQNALYGVRIKTWQGGIGSVKNVSFSNIQVSDVKVPIMIDQYYCDKHIC 333
>gi|84798479|gb|ABC67156.1| polygalacturonase [Coffea arabica]
Length = 119
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 59/117 (50%), Gaps = 40/117 (34%)
Query: 96 EGIHIGSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEE 139
+GIH+G S+G I+ S I TGDDCVSLG HGIS+GSLG+ N+E
Sbjct: 1 DGIHVGRSSGVNITDSTIGTGDDCVSLGDGSKQVSITNVVCGPGHGISIGSLGRYKNEEP 60
Query: 140 VVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQL-YCP 172
VVG+ VRNCT T +I NV +PIVIDQ YCP
Sbjct: 61 VVGVFVRNCTLINTLTGVRVKSWPSATTGAATDVHFDDITMRNVTSPIVIDQKNYCP 117
>gi|218188124|gb|EEC70551.1| hypothetical protein OsI_01700 [Oryza sativa Indica Group]
Length = 783
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 89/192 (46%), Gaps = 42/192 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
I+F +D ++ G++ +S FH+ GC + ++ L +++ A SPNT+G+H+ +++
Sbjct: 481 IKFVASSDVSVQGLRMENSPQFHLKFDGCSRVLVDGLVVSSPASSPNTDGVHVENTSSVR 540
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNC--- 148
I +S I+ GDDCVS+ GHGIS+G LG V +TVR
Sbjct: 541 ILNSRISNGDDCVSIGGGCSGVRVENVTCVHGHGISIGGLGARGARACVSNVTVRGARVV 600
Query: 149 ---------TFTG-----TNIVTN-----NVENPIVIDQLYCPYNKCNIKVP----SQVK 185
T+ G + +V + NV IVIDQ YC + + V+
Sbjct: 601 DSDNGVRIKTWQGGAGSVSGVVFDAVQMVNVRGCIVIDQYYCDAHGGAGAGCANQTAAVR 660
Query: 186 TSNVRFNNIRGT 197
V + IRGT
Sbjct: 661 VDGVAYRGIRGT 672
>gi|255568778|ref|XP_002525360.1| Polygalacturonase precursor, putative [Ricinus communis]
gi|223535323|gb|EEF36998.1| Polygalacturonase precursor, putative [Ricinus communis]
Length = 510
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 99/239 (41%), Gaps = 83/239 (34%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ G+ +S+ + I +++++ + +++ DSPNT+GIHI S + I TGD
Sbjct: 199 VRGLTIQNSQQMNFVIARSASVRVSRVLVSSPGDSPNTDGIHITDSTNVALQDCKIGTGD 258
Query: 118 DCVSL----------------GHGISVGSLGK----GINDEEVV----------GLTVRN 147
DCVS+ GHG+S+GSLGK GI + V+ GL ++
Sbjct: 259 DCVSIVNGSSGIKMKRIFCGPGHGVSIGSLGKDNSTGIVSKVVLDTAFLKETTNGLRIKT 318
Query: 148 ---------------------CTFTGTNIV----------------------TNNVENPI 164
CT +N + +NV NPI
Sbjct: 319 WQVILLPIIDMKSLIVQNTEVCTSRSSNYIHSVTLLQGGNGYVRGIRFENVQMDNVANPI 378
Query: 165 VIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNIN 213
+IDQ YC K S VK S + + N+ GT+ ++ +PC+NI + NIN
Sbjct: 379 IIDQFYCDSPKTCQNQTSAVKISEIMYRNVTGTTKSARAMNFACSDTVPCENIVLSNIN 437
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYL 46
+ NV FGA DG+ DD++AF AW+ AC+ KS LVPPG +YL
Sbjct: 62 LVNVDSFGAAGDGVSDDTQAFVNAWKTACSTP--KSVFLVPPGRRYL 106
>gi|115436326|ref|NP_001042921.1| Os01g0329300 [Oryza sativa Japonica Group]
gi|53791330|dbj|BAD54709.1| putative polygalacturonase PG2 [Oryza sativa Japonica Group]
gi|113532452|dbj|BAF04835.1| Os01g0329300 [Oryza sativa Japonica Group]
Length = 759
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 42/192 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
I+F +D ++ G++ +S FH+ GC + ++ L +++ A SPNT+G+H+ +++
Sbjct: 481 IKFVASSDVSVQGLRMENSPQFHLKFDGCSRVLVDGLVVSSPASSPNTDGVHVENTSSVR 540
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I +S I+ GDDCVS+ GHGIS+G LG V +TVR
Sbjct: 541 ILNSRISNGDDCVSIGGGCSGVRVENVTCVHGHGISIGGLGARGARACVSNVTVRGARVV 600
Query: 152 GTN----------------------IVTNNVENPIVIDQLYCPYNKCNIKVP----SQVK 185
++ + NV IVIDQ YC + + V+
Sbjct: 601 DSDNGVRIKTWQGGAGSVSGVVFDAVQMVNVRGCIVIDQYYCDAHGGAGAGCANQTAAVR 660
Query: 186 TSNVRFNNIRGT 197
V + IRGT
Sbjct: 661 VDGVAYRGIRGT 672
>gi|242088671|ref|XP_002440168.1| hypothetical protein SORBIDRAFT_09g027160 [Sorghum bicolor]
gi|241945453|gb|EES18598.1| hypothetical protein SORBIDRAFT_09g027160 [Sorghum bicolor]
Length = 423
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 112/257 (43%), Gaps = 60/257 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F ++ GI +S+ +H+ N++ N L++T+ DS +T+GIH+ S
Sbjct: 151 AVHFEDCQGISVKGITLQNSQSYHLTFTRSSNVEANYLRVTSPEDSIDTKGIHLVDSFNV 210
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLG--KGINDEEVV------- 141
+ ++I+TGDDCVS+ GHGIS+G+LG ++ E +
Sbjct: 211 HVMDNLISTGDDCVSIVGNCEDVRLRAISCGPGHGISIGTLGVNNSVDYVEKIKVDTLFI 270
Query: 142 -----GLTVRNCTFTG---------TNIVTNNVENPIVIDQ-----LYCPYNKCNIKVPS 182
G+ VR G +IV NV NPI++DQ L +
Sbjct: 271 SNTKNGVRVRTTRSGGGGFARKVKFESIVMRNVTNPIIVDQGNSDHLPASSEAVAPAAAT 330
Query: 183 QVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ + + +I GTSA+K PC+++ + N+N +V+G + S C
Sbjct: 331 AVQVEKINYIDITGTSASKHAVTFSCSDAKPCRHLSLVNVNL------TQVDGTKALSYC 384
Query: 233 SNVKPTLFGKQIPATCV 249
G IP +C+
Sbjct: 385 RKAFGRSIGTVIPESCL 401
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREAC 29
+ + DFGAV DG+ DD+KA AW AC
Sbjct: 28 LLTLHDFGAVGDGVADDTKALADAWTAAC 56
>gi|357128340|ref|XP_003565831.1| PREDICTED: polygalacturonase At1g48100-like [Brachypodium
distachyon]
Length = 268
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 81/188 (43%), Gaps = 50/188 (26%)
Query: 76 CYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------------- 122
C + +++ I++ +SPNT+GIH+ + I H+ +A GDDCVS+
Sbjct: 22 CQGVMVHNFTISSPENSPNTDGIHLQNYKDVNIHHTDLACGDDCVSIQTGCSDISIHNAN 81
Query: 123 ---GHGISVGSLGKGINDEEVVGLTVRNC----TFTG------------------TNIVT 157
GHGIS+G LG+ V +TVR+ T TG NI
Sbjct: 82 CGPGHGISIGGLGRYNTKACVSNITVRDVSMFKTMTGVRIKTWQGGSGLVQGIRFANIQV 141
Query: 158 NNVENPIVIDQLYCPYNKCNIKVPSQ---VKTSNVRFNNIRGTSANK---------IPCQ 205
+ V+ PI+IDQ YC +Q V S V++ NIRGT K PC
Sbjct: 142 SEVQTPIMIDQFYCDKRAAAGACTNQSSAVVVSGVQYENIRGTYTTKATHFACSDSAPCS 201
Query: 206 NIGIGNIN 213
I + I
Sbjct: 202 EITMAGIQ 209
>gi|338930682|emb|CBM42665.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 169
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 39/153 (25%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTN 158
GHGISVGSLG+ ++++V + V+ CT T NI
Sbjct: 14 GHGISVGSLGRYKDEKDVTDINVKGCTLKKTSNGVRIKSYEDAASVLSASNLHYENIAME 73
Query: 159 NVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIG 208
+V NPI+ID YCP C S+V +V F NI GTS + K+PC +
Sbjct: 74 DVANPIIIDMKYCPNKICTKNGASKVTIKDVTFKNITGTSSTPEAVSLLCSEKLPCTGVT 133
Query: 209 IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
+ N+ Y G N K T ++C+N K + G
Sbjct: 134 LDNVKVEYKGTNNK-----TMAVCNNAKGSSTG 161
>gi|338930680|emb|CBM42664.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 169
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 69/153 (45%), Gaps = 39/153 (25%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------------NIVTN 158
GHGISVGSLG+ ++++V + V+ CT T NI
Sbjct: 14 GHGISVGSLGRYKDEKDVTDINVKGCTLKKTSNGVRIKSYEDAASVLSASNLHYENIAME 73
Query: 159 NVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIG 208
+V NPI+ID YCP C S+V +V F NI GTS + K+PC +
Sbjct: 74 DVANPIIIDMKYCPNKICTKNGASKVTIKDVTFKNITGTSSTPEAVSLLCSEKLPCTGVT 133
Query: 209 IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
+ N+ Y G N K T ++C+N K + G
Sbjct: 134 LDNVKVEYKGTNNK-----TMAVCNNAKGSSTG 161
>gi|357454631|ref|XP_003597596.1| Polygalacturonase [Medicago truncatula]
gi|355486644|gb|AES67847.1| Polygalacturonase [Medicago truncatula]
Length = 548
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 27/121 (22%)
Query: 136 NDEEVVGLTVRNCTFTGTN---------IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
N+E V +TVRN T T+ I+ NN NP++IDQ YCP+N+C+ K S++K
Sbjct: 436 NEEPVEYITVRNRTLRNTDNGLRIKTWDIIMNNFSNPVIIDQEYCPWNQCS-KFSSKIKI 494
Query: 187 SNVRFNNIRGTSA----------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S V F NI G A N +P + + + NI+ +NGV V + C+NVK
Sbjct: 495 SKVTFKNIMGIFATQNCVVLIRSNGVPYEEVVLSNIDLTFNGVTV-------NATCANVK 547
Query: 237 P 237
P
Sbjct: 548 P 548
>gi|302813168|ref|XP_002988270.1| hypothetical protein SELMODRAFT_426909 [Selaginella moellendorffii]
gi|300144002|gb|EFJ10689.1| hypothetical protein SELMODRAFT_426909 [Selaginella moellendorffii]
Length = 477
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 68/131 (51%), Gaps = 34/131 (25%)
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
I + DSPNT+GIH+ + I + ++ GDDCVS+ GHGIS+G
Sbjct: 65 IDSPGDSPNTDGIHVSGTTNIVIDKADVSAGDDCVSIVSGSDNVKVTNSRCGPGHGISIG 124
Query: 130 SLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
SLGK G + C +IV NNV+NPI++DQ N I +TSN+
Sbjct: 125 SLGKA-------GW-LWLCEEAFDDIVMNNVKNPIIVDQ-----NLATI-----ARTSNI 166
Query: 190 RFNNIRGTSAN 200
F+NIRGTS +
Sbjct: 167 TFSNIRGTSVS 177
>gi|242052857|ref|XP_002455574.1| hypothetical protein SORBIDRAFT_03g013330 [Sorghum bicolor]
gi|241927549|gb|EES00694.1| hypothetical protein SORBIDRAFT_03g013330 [Sorghum bicolor]
Length = 548
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 92/216 (42%), Gaps = 67/216 (31%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ND T+ G++ +S FH+ C ++++ L +++ A SPNT+G+H+ ++ +
Sbjct: 256 IRFFLSNDVTVCGLRIENSPQFHLRFDDCERVRVDGLFVSSPASSPNTDGVHVENTTSVQ 315
Query: 108 ISHSVIATGDDCVSL----------------GHGI------------------------- 126
I +S I GDDCVS+ GHGI
Sbjct: 316 ILNSRIYNGDDCVSIGAGCSDVHVENITCGHGHGIRYLSVSHSATCFHGGTSPDAAKLCS 375
Query: 127 ---SVGSLGKGINDEEVVGLTVRNCTFT-------------GTNIVT---------NNVE 161
S+GSLG V +TVRN GT VT NV+
Sbjct: 376 HRRSIGSLGVHNTHACVSNITVRNARILDSDNGLRIKTWQGGTGAVTAVEFAGVQMQNVK 435
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT 197
+ IVIDQ YC + C + S V+ + V + +I GT
Sbjct: 436 SCIVIDQYYCLGHGCANQT-SAVRVAGVTYRDIHGT 470
>gi|383100775|emb|CCG48006.1| polygalacturonase, putative, expressed [Triticum aestivum]
Length = 441
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 108/258 (41%), Gaps = 61/258 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++ F D ++ GI +S+ H+ C++++ L++T+ S T G+ + SS
Sbjct: 160 MALHFEDCRDVSVKGITVQNSQRQHLVFTRCHDVEAYYLRVTSPEYSHGTVGVLVVSSTD 219
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I H + + G DCVS+ G GIS G LG+ +++ + + + N
Sbjct: 220 VHIKHDLFSVGGDCVSIAGNSSDIRLRAISCGPGLGISTGGLGENQSNDRIHKIKMDNML 279
Query: 150 FTGT----------------------NIVTNNVENPIVIDQLYCPYNK-----CNIKVPS 182
+ T +I NV NPIVIDQ Y N C S
Sbjct: 280 LSNTKNGLRIKTYENGCGYARKVKFAHITMRNVANPIVIDQHYSASNSNRGTPCGTPNGS 339
Query: 183 QVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTS-L 231
V +++ +I GTSA + +PC+++ + +GVN+K G +TS
Sbjct: 340 VVAVEKIKYIDITGTSATERAVTFACSDAMPCKHLYL-------DGVNLKTAGGGSTSAY 392
Query: 232 CSNVKPTLFGKQIPATCV 249
C G +P +C+
Sbjct: 393 CHQAFGKHVGDVLPVSCL 410
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
+ ++ DFGAV DGI +D++AF AW+ AC G + + VP GK I
Sbjct: 31 LLSLDDFGAVGDGIANDTQAFVDAWKAACATGGT-TYLNVPAGKSYQI 77
>gi|8778576|gb|AAF79584.1|AC007945_4 F28C11.9 [Arabidopsis thaliana]
Length = 1161
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 60/235 (25%), Positives = 93/235 (39%), Gaps = 79/235 (33%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
++G+ +S+ + I +++++ + +++ DSPNT+GIHI S + I TGD
Sbjct: 873 VSGLTIQNSQQMNFIIARSDSVRVSKVMVSSPGDSPNTDGIHITGSTNVILQDCKIGTGD 932
Query: 118 DCVSL----------------GHGISVGSLGK----GINDEEVVGLTVRNCTFTGTNIVT 157
DCVS+ GHGIS+GSLGK GI + V+ + T G I T
Sbjct: 933 DCVSIVNASSNIKMKNIYCGPGHGISIGSLGKDNTTGIVTQVVLDTALLRETTNGLRIKT 992
Query: 158 -------------------------------------------------NNVENPIVIDQ 168
+V NPI+IDQ
Sbjct: 993 YQVHKKKKASLFSKNFDLARSTTILFHCFSFEQGGSGYVQGIRFTNVEMQDVANPILIDQ 1052
Query: 169 LYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNIN 213
YC S VK S + + NI GT+ ++ +PC +I + N+N
Sbjct: 1053 FYCDSPTTCQNQTSAVKISQIMYRNITGTTKSAKAIKFACSDTVPCSHIVLNNVN 1107
Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYL--SIRFN 51
NV FGA DG+ DD++AF +AW +AC+ KS LVP G +YL + +FN
Sbjct: 714 NVDTFGAAGDGVSDDTQAFVSAWSKACSTS--KSVFLVPEGRRYLVNATKFN 763
>gi|57899399|dbj|BAD88046.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
gi|57900558|dbj|BAD88298.1| putative polygalacturonase PG1 [Oryza sativa Japonica Group]
Length = 372
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 99/254 (38%), Gaps = 100/254 (39%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG---------KYLSIRFNF 52
F+V FGA +GI DDS+ I VL PPG + F +
Sbjct: 27 FSVSSFGAAGNGIADDSE--------------IDGDVLAPPGMGYWPKARRPLQWLNFKW 72
Query: 53 LNDSTITGIKSVDS-----------------RYF------------------HINILGCY 77
L+ TI G +VD R++ H+
Sbjct: 73 LDGFTIQGTGTVDGQSTLLRSVSPANVSQLIRFYSSFNVSVRNIRITNSPQCHLKFDSSG 132
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--------------- 122
+K+ ++ I++ DS NT+GIH+ ++ +I S I GDDC+S+
Sbjct: 133 GIKVKNITISSPGDSLNTDGIHLQNTRDVDIRSSSIGCGDDCISIQTGCSNVHMKNINCN 192
Query: 123 -GHGISVGSLGKG-------------INDEEVV-GL----------TVRNCTFTGTNIVT 157
GHGIS+G LGK IN E + G+ TVRN TF +N+
Sbjct: 193 PGHGISLGGLGKDNSLACVSDVFAEHINVENALYGVRIKTWQGGKGTVRNVTF--SNVRV 250
Query: 158 NNVENPIVIDQLYC 171
NV PI IDQ YC
Sbjct: 251 ANVATPIAIDQFYC 264
>gi|59939885|gb|AAX12520.1| polygalacturonase [Psidium guajava]
Length = 119
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 58/116 (50%), Gaps = 40/116 (34%)
Query: 97 GIHIGSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEV 140
GIH+G S G I+ + I TGDDCVSLG HGIS+GSLGK +++ V
Sbjct: 2 GIHVGRSTGVNITGADIRTGDDCVSLGDGSQQVNVESVTCGPGHGISIGSLGKYHDEQPV 61
Query: 141 VGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQL-YCP 172
VG+TVRNCT T T +I NV PI+IDQ YCP
Sbjct: 62 VGVTVRNCTLTNTPNGIRVKTWPASPGGVATNMHFEDITVKNVSTPILIDQKNYCP 117
>gi|414879283|tpg|DAA56414.1| TPA: putative alcohol dehydrogenase superfamily protein [Zea mays]
Length = 622
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
D + G++SVDS FH+ +L C+ + + + + A ADSPNT+GIH+ S + + I
Sbjct: 159 KDVVVAGLRSVDSELFHVVVLQCHGVTVRGVTVEAPADSPNTDGIHLHMSTHVSVYDARI 218
Query: 114 ATGDDCVSLGHG 125
+TGDDC+S+G G
Sbjct: 219 STGDDCISIGPG 230
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 7/60 (11%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
V+NV +GA DG+ D + F AW +AC + +AV VPPG+YL + +T TG
Sbjct: 29 VYNVLRYGARPDGVTDAAGPFLRAWADACR-SPLPAAVYVPPGRYL------VRSATFTG 81
>gi|38699529|gb|AAR27069.1| endo-polygalacturonase [Ficus carica]
Length = 118
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 60/118 (50%), Gaps = 39/118 (33%)
Query: 92 SPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGI 135
SPNT+G+H+ +S G I +S I TGDDCVS+ GHGIS+GSLGK +
Sbjct: 1 SPNTDGMHVQASTGVTILNSQIGTGDDCVSIGPGTTNLWIEDIACGPGHGISIGSLGKEL 60
Query: 136 NDEEVVGLTVRNCTFTGT-----------------------NIVTNNVENPIVIDQLY 170
+ V +TV+ TF GT ++V NV+NPI+IDQ Y
Sbjct: 61 KEAGVQNVTVKTATFRGTQNGLRIKSWGRPSSGFARNILFQHVVMINVQNPIIIDQHY 118
>gi|223948709|gb|ACN28438.1| unknown [Zea mays]
Length = 506
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
D + G++SVDS FH+ +L C+ + + + + A ADSPNT+GIH+ S + + I
Sbjct: 43 KDVVVAGLRSVDSELFHVVVLQCHGVTVRGVTVEAPADSPNTDGIHLHMSTHVSVYDARI 102
Query: 114 ATGDDCVSLGHG 125
+TGDDC+S+G G
Sbjct: 103 STGDDCISIGPG 114
>gi|302801658|ref|XP_002982585.1| hypothetical protein SELMODRAFT_116909 [Selaginella moellendorffii]
gi|300149684|gb|EFJ16338.1| hypothetical protein SELMODRAFT_116909 [Selaginella moellendorffii]
Length = 420
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 113/289 (39%), Gaps = 79/289 (27%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W ++C +D + P L L D G+ V+S+ H +I N+ +L
Sbjct: 138 WPKSCKFDSTQPCHRAPTSLVLHDSERVLVD----GLTLVNSQQIHFSIFHSSNVTATNL 193
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIATG----------------DDCVSL------ 122
++A SPNT+G+H+ S + I TG DDC+S+
Sbjct: 194 IVSAARKSPNTDGVHVQGSKFVNLGTITIDTGMPASLSFFLSFPFSLWDDCISIGANTSH 253
Query: 123 ----------GHGISVGSLGKGINDEEVV--------------GLTVRNCTFTG------ 152
GHGIS+GSLG + V GL ++ +G
Sbjct: 254 VSMRDITCGAGHGISIGSLGNYKSAAFVSNISLDGALLANTTNGLRIKTWPASGGAGLAT 313
Query: 153 ----TNIVTNNVENPIVIDQLYCPYNKC--NIKVPSQVKTSNVRFNNIRGTSANKI---- 202
N+ +NV+NPI+IDQ YC S V+ +V + NI G+SA +
Sbjct: 314 GISFRNVQMDNVKNPIIIDQFYCDMESSPQGCDHGSGVEVRDVVYENISGSSATPVGVKL 373
Query: 203 ----PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPAT 247
PC I + NI + +G T+ CS+V +G+ AT
Sbjct: 374 NCNHPCTEIVMSNIRLIQT-----RDGSPCTAECSHV----YGRAYNAT 413
>gi|222617828|gb|EEE53960.1| hypothetical protein OsJ_00563 [Oryza sativa Japonica Group]
Length = 409
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 94/244 (38%), Gaps = 93/244 (38%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL---SIRFN------ 51
++NV DF A DG DD+KAF AW E CN +G +++P G+ I+FN
Sbjct: 140 LYNVLDFNATGDGNTDDTKAFLAAWEETCNNEGWP-ILIIPGGRTFLLKQIKFNGSCKSP 198
Query: 52 ---------------------------FLNDSTITGIKSVDS----------------RY 68
+N+ T+ G +D R
Sbjct: 199 IKIQMDGNIVAPNYIWASEADNLITFYSVNNLTLDGNGQIDGKGAIWWTCYTEKKCVYRP 258
Query: 69 FHINILGCYNLKLNDLKITAHAD-----------------------SPNTEGIHIGSSNG 105
+ C NL + ++ +T AD SPNT+GI + S+
Sbjct: 259 VILAFAACNNLSVTNIHLTNSADKHMTVYRCSQVHVHNVTIVAPGDSPNTDGITMAISDH 318
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
IS+ I +GDDCVS+ GHGISVGSLG+ V +TV NC
Sbjct: 319 VYISNCSIQSGDDCVSMLSYTTDVNITDITCGPGHGISVGSLGR-FETALVERITVSNCN 377
Query: 150 FTGT 153
F GT
Sbjct: 378 FIGT 381
>gi|356498200|ref|XP_003517941.1| PREDICTED: LOW QUALITY PROTEIN: probable polygalacturonase
At3g15720-like [Glycine max]
Length = 403
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 94/201 (46%), Gaps = 54/201 (26%)
Query: 48 IRFNFLNDST---------ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGI 98
IRF + DS ++G+ ++S HI+I+ C N +++L + A +SPNT+
Sbjct: 150 IRFRHIRDSLHFRECDNLFLSGLIHLNSPKNHISIIRCNNSLISNLHMIAPNESPNTDEN 209
Query: 99 HIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVG 142
I S+ I +S + G+DC+++ GHGIS+GSLG + V
Sbjct: 210 VISHSSNISIKNSKMEIGEDCIAINHGSTFISIIGVFCKPGHGISIGSLGXNGAHQTVEE 269
Query: 143 LTVRNCTFTGT----------------------NIVTNNVENPIVIDQLYCPY-NKCNIK 179
+ VRNCTF T +I N ++IDQLY P N C ++
Sbjct: 270 ICVRNCTFNRTTNGARIKTWIGGQGYARKITFKDIKLVEATNLVIIDQLYNPCDNVCAVR 329
Query: 180 VPSQVKTSNVRFNNIRGTSAN 200
V ++V ++N+RG S++
Sbjct: 330 V------NDVSYHNVRGISSS 344
>gi|357437101|ref|XP_003588826.1| Polygalacturonase [Medicago truncatula]
gi|355477874|gb|AES59077.1| Polygalacturonase [Medicago truncatula]
Length = 402
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 52/211 (24%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+++F+ + ITG+ ++ HI + ++ ++ + I + +S NT+GI + +
Sbjct: 159 ALQFDKCDGLQITGLTHINGPGPHIAVTDSQDITISHIHINSPKESHNTDGIDLTRAIRV 218
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ I +GDDC+++ GHGISVGSLG + E V L ++NCTF
Sbjct: 219 NVHDIPIRSGDDCIAIKGGSQFVNVSQVTCGPGHGISVGSLGGHGSPEFVEHLRIKNCTF 278
Query: 151 TG----------------------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQ---VK 185
G +I+ P+ IDQ Y +K P Q VK
Sbjct: 279 NGGDSAVKIKTWPGGKGYAKDIIFEDIILYQTNYPVYIDQHY-------MKTPEQHQAVK 331
Query: 186 TSNVRFNNIRGTSANK----IPCQNIGIGNI 212
SN++F+NI GT ++ + C IG +I
Sbjct: 332 ISNIKFSNIHGTCIDENAIVLDCAKIGCYDI 362
>gi|359487382|ref|XP_003633582.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Vitis
vinifera]
Length = 418
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
+N+K+F G D + + W+ C + I+ ++ P I F ND + G+
Sbjct: 179 YNIKNFQVEGQGTIDGNG--KIGWKNLCKINIIQPCIVAP----TLISFIQCNDLKVYGL 232
Query: 62 KSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
+++ H++ N++ ++++T+ SPNT+GIH+ S +I VI GDDC+S
Sbjct: 233 NVQNAQEMHVSFEQSVNVQAFNIRVTSPGTSPNTDGIHVTRSENVQIIKPVIQAGDDCIS 292
Query: 122 L----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----NIVTNNVE 161
+ GHGIS+GSLG G ++ V + V GT I T V
Sbjct: 293 IVNGSKNIEAIDVTCGPGHGISIGSLGGGKSEAXVSNVLVNKAKLIGTTNGVRIKTWQVR 352
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
++ + N + Q+K N+ + NI GTSA + PCQ I + +
Sbjct: 353 LEHTVEYMLTYMNSHILSYLLQIK--NIVYKNITGTSATERTTIFNCSKTFPCQGIVLQD 410
Query: 212 INWVYNG 218
IN VY
Sbjct: 411 INQVYKA 417
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
NV++FGA DG DD++AF+ AW E C+ + +AVLV P
Sbjct: 94 NVENFGAEGDGETDDTEAFKKAWDETCSSN---TAVLVVP 130
>gi|414877336|tpg|DAA54467.1| TPA: hypothetical protein ZEAMMB73_770856 [Zea mays]
Length = 367
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 93/223 (41%), Gaps = 74/223 (33%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF ND T+ G++ +S FH+ C ++++ L +++ A SPNT+G+H+ ++ +
Sbjct: 68 IRFFSSNDVTVCGLRIENSPQFHLRFDDCERVRVDGLFVSSPASSPNTDGVHVENTKSVQ 127
Query: 108 ISHSVIATGDDCVSL----------------GHGI------------------------- 126
I +S I GDDCVS+ GHGI
Sbjct: 128 ILNSRIYNGDDCVSIGAGCSDVHVENITCGHGHGIRYLSVCHSLTHQRASMARGTVCSEP 187
Query: 127 ----------SVGSLGKGINDEEVVGLTVRNC------------TFTG----------TN 154
S+GSLG V +TVRN T+ G T
Sbjct: 188 DAASCCCHPRSIGSLGVHNTHACVSNVTVRNVRILDSDNGVRIKTWQGGAGAVSAVEFTG 247
Query: 155 IVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT 197
+ NV+N IVIDQ YC + C + S V+ + V + +I GT
Sbjct: 248 VQMQNVKNCIVIDQYYCLGHGCANQT-SAVRVAGVAYRDIHGT 289
>gi|356573313|ref|XP_003554806.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like
[Glycine max]
Length = 259
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 44 KYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSS 103
K ++RF + T+TGI +S+ H+ C N+++ D+ +++ DSPNT+GIH+ +S
Sbjct: 125 KSTALRFYGSDGVTVTGITIQNSQKTHLKFDSCTNVQVFDINVSSPGDSPNTDGIHLXNS 184
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRN 147
I + + DDC+S GHGIS+GSLG+ V LT++
Sbjct: 185 QNVVIYSTTLVVSDDCISTQTGCSDIYVHNANCGPGHGISIGSLGRENTKTSVRNLTIQT 244
Query: 148 C--TFTGTNIVTNNV 160
T TG I T V
Sbjct: 245 IQNTLTGVRIKTWQV 259
>gi|449511599|ref|XP_004164001.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 321
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
W +S P G S+ F + I+G+ S++S+ +HI + C N+K+ L I A A
Sbjct: 156 WACKQSGKTCPRGT-TSLEFTNSQNILISGLTSLNSQIYHIVMNKCRNVKMESLNIYAPA 214
Query: 91 DSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHG 125
+SPNT+GI + + + I S I TGDDC+SLGHG
Sbjct: 215 NSPNTDGIDLEETTYATILDSNIGTGDDCISLGHG 249
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 1 VFNVKDFGAVADGIK-DDSKAFETAWREACNWDGIKSAVLVPPGKY 45
FNV D+GA D K D +KAF++AW AC+ + + VP K+
Sbjct: 49 TFNVVDYGAKPDNTKFDSAKAFQSAWTHACS-SSKAATIYVPKAKF 93
>gi|125526362|gb|EAY74476.1| hypothetical protein OsI_02367 [Oryza sativa Indica Group]
Length = 382
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 103/250 (41%), Gaps = 82/250 (32%)
Query: 2 FNVKDFGAVADGIKDDSK-----------AFETAWREACNW------DGI---------- 34
F+V FGA +GI DDS+ + R W DG
Sbjct: 27 FSVSSFGAAGNGIADDSEIDGDVLAPPGMGYWPKARRPLQWLNFKWLDGFTIQGTGTVDG 86
Query: 35 KSAVL--VPPGK-----YLS------IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
+S +L V P Y+S IRF + ++ I+ +S H+ +K+
Sbjct: 87 QSTLLRSVSPANVSQHWYISGVKPTLIRFYSSFNVSVRNIRITNSPQCHLKFDSSGGIKV 146
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
++ I++ DS NT+GIH+ ++ +I S I GDDC+S+ GHG
Sbjct: 147 KNITISSPGDSLNTDGIHLQNTRDVDIRSSSIGCGDDCISIQTGCSNVHMKNINCNPGHG 206
Query: 126 ISVGSLGKG-------------INDEEVV-GL----------TVRNCTFTGTNIVTNNVE 161
IS+G LGK IN E + G+ TVRN TF +N+ NV
Sbjct: 207 ISLGGLGKDNSLACVSDVFAEHINVENALYGVRIKTWQGGKGTVRNVTF--SNVRVANVA 264
Query: 162 NPIVIDQLYC 171
PI IDQ YC
Sbjct: 265 TPIAIDQFYC 274
>gi|413950351|gb|AFW83000.1| hypothetical protein ZEAMMB73_048385 [Zea mays]
Length = 436
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 75/164 (45%), Gaps = 42/164 (25%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF + ++ I+ +S H+ +++ ++ I++ DSPNT+GIH+ ++ E
Sbjct: 171 IRFYNSFNVSVRNIRISNSPQCHLKFDSSGGIRVKNVTISSPGDSPNTDGIHLQNTKDVE 230
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKG--------------IND 137
I S I GDDCVS+ GHGIS+G LGK +
Sbjct: 231 IRSSTIGCGDDCVSIQTGCSNVHMKNVVCNPGHGISLGGLGKDNSLACVSDVVAENIVVQ 290
Query: 138 EEVVGL----------TVRNCTFTGTNIVTNNVENPIVIDQLYC 171
+ G+ +VRN TF +N+ NV PI IDQ YC
Sbjct: 291 NALYGVRIKTWQGGVGSVRNITF--SNVRVANVATPIAIDQFYC 332
>gi|413946317|gb|AFW78966.1| polygalacturonase [Zea mays]
Length = 429
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 65/262 (24%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F ++ GI +S+ +H+ +++ N L++T+ S +T+GIH+ S
Sbjct: 151 AVHFEDCQGISVKGITLQNSQSYHLTFTRSSDVEANYLRVTSPEHSVDTKGIHLVDSYNV 210
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLG--KGINDEEVV------- 141
+ ++I+TGDDCVS+ GHGIS+G+LG ++ E +
Sbjct: 211 HVMDNLISTGDDCVSIVGNCTDVRLRAISCGPGHGISIGTLGVNSSVDYVEKIKVDTLFI 270
Query: 142 -----GLTVRNCTFTG----------TNIVTNNVENPIVIDQ---------LYCPYNKCN 177
G+ VR G +IV NV NPI++DQ
Sbjct: 271 SNAENGVRVRTTENGGGGGFARKVKFESIVMRNVTNPIIVDQGISSDDPPPSSPEAVALA 330
Query: 178 IKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPE 227
+ V+ + + +I GTSA++ PC+ + + N+N +V+G E
Sbjct: 331 ATASAAVQVEKINYIDITGTSASERAVTFSCSDARPCRRLSLDNVNL------TQVDGSE 384
Query: 228 TTSLCSNVKPTLFGKQIPATCV 249
+S C G +P +C+
Sbjct: 385 ASSYCRQAFGRSVGTVVPESCL 406
>gi|384500308|gb|EIE90799.1| hypothetical protein RO3G_15510 [Rhizopus delemar RA 99-880]
gi|384500309|gb|EIE90800.1| hypothetical protein RO3G_15511 [Rhizopus delemar RA 99-880]
Length = 383
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 65/246 (26%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPN----TEGIHIGSS 103
+RF N S ++GI V++ H+ + NL L+++ + + S N T+ + + SS
Sbjct: 136 LRFGLTN-SKVSGINIVNAPRAHMGVTNSQNLILDNITLKTASTSSNLAKNTDALDVSSS 194
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRN 147
G +S + GDDC+++ GHG SVGSLGKG E V + + N
Sbjct: 195 QGIIFQNSHLTVGDDCLAINGGVTNITLNNINCNGGHGFSVGSLGKGGKSETVKTVRILN 254
Query: 148 CTFTG----------------------TNIVTNNVENPIVIDQLYCPYNK---CNIKVPS 182
+ T +NI NNV+NPI+I YC N+ CN S
Sbjct: 255 SSCTNCQNGVRIKTWPGGKGSVSDVKYSNIKLNNVDNPIIITTHYCDKNQQSYCNGNDAS 314
Query: 183 QVKTSNVRFNNIRGTSAN------------KIPCQNIGIGNINWVYNGVNVKVEGPETTS 230
+ S+V + I G+ ++ K PC + +GVN+ +
Sbjct: 315 SLSISDVSISGITGSVSSAGNPIVSIDCSTKTPCTGFSV-------SGVNISKSSKTKKN 367
Query: 231 LCSNVK 236
+C+N++
Sbjct: 368 VCTNLQ 373
>gi|89640981|gb|ABD77576.1| polygalacturonase, partial [Opuntia ficus-indica]
Length = 94
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 47/78 (60%), Gaps = 16/78 (20%)
Query: 93 PNTEGIHIGSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGIN 136
PNT+GIH+G S I+ I TGDDC+SLG HGISVGSLGK
Sbjct: 2 PNTDGIHVGRSRRVNITGVDINTGDDCISLGDGSQHIYIENVTCGLGHGISVGSLGKYRG 61
Query: 137 DEEVVGLTVRNCTFTGTN 154
++ VVG+TVRNCT T TN
Sbjct: 62 EQPVVGITVRNCTLTNTN 79
>gi|449443297|ref|XP_004139416.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
sativus]
gi|449493697|ref|XP_004159417.1| PREDICTED: probable polygalacturonase At1g80170-like [Cucumis
sativus]
Length = 290
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 30/160 (18%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVI 113
ND ++ + ++S + ++GC ++ +L ITA SPNT+GIHI SS+ I ++ I
Sbjct: 95 NDPNLSNLHFINSSQALVLLMGCIRTEIKNLVITAPERSPNTDGIHIHSSHNIIIRNTTI 154
Query: 114 ATGDDCVSL---------GHGISVGSLGKGINDEEVVGLTVRNCTFTGTNIVTNNVENPI 164
TGD + GHGIS+GSLG+G N +V ++V N F GT
Sbjct: 155 GTGDYTSRMNISHIKCGPGHGISIGSLGRGGNFVQVEDISVSNIYFKGTT---------- 204
Query: 165 VIDQLYCPYNKCNIKVPSQ--VKTSNVRFNNIRGTSANKI 202
N IK Q V +NV N+ GTS + +
Sbjct: 205 ---------NGARIKTWQQSGVHIANVSIKNLFGTSMSNV 235
>gi|222618338|gb|EEE54470.1| hypothetical protein OsJ_01569 [Oryza sativa Japonica Group]
Length = 760
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 16/101 (15%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
I+F +D ++ G++ +S FH+ GC + ++ L +++ A SPNT+G+H+ +++
Sbjct: 481 IKFVASSDVSVQGLRMENSPQFHLKFDGCSRVLVDGLVVSSPASSPNTDGVHVENTSSVR 540
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLG 132
I +S I+ GDDCVS+ GHGIS+G LG
Sbjct: 541 ILNSRISNGDDCVSIGGGCSGVRVENVTCVHGHGISIGGLG 581
>gi|302798709|ref|XP_002981114.1| hypothetical protein SELMODRAFT_113633 [Selaginella moellendorffii]
gi|300151168|gb|EFJ17815.1| hypothetical protein SELMODRAFT_113633 [Selaginella moellendorffii]
Length = 427
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 112/296 (37%), Gaps = 86/296 (29%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDL 84
W ++C +D + P L L D G+ V+S+ H +I N+ +L
Sbjct: 138 WPKSCKFDSTQPCHRAPTSLVLHDSERVLVD----GLTLVNSQQIHFSIFHSSNVTATNL 193
Query: 85 KITAHADSPNTEGIHIGSSNGSEISHSVIAT-----------------------GDDCVS 121
++A SPNT+G+H+ S + I T GDDC+S
Sbjct: 194 IVSAARKSPNTDGVHVQGSKFVNLGTITIDTGMPASFSFFLSFFPFLTLFALLDGDDCIS 253
Query: 122 L----------------GHGISVGSLGK--------------GINDEEVVGLTVRNCTFT 151
+ GHGIS+GSLG + GL ++ +
Sbjct: 254 IGANTSHVSMRDITCGAGHGISIGSLGNYKSAAFVSNISLDGALLANTTNGLRIKTWPAS 313
Query: 152 G----------TNIVTNNVENPIVIDQLYCPYNKC--NIKVPSQVKTSNVRFNNIRGTSA 199
G N+ +NV+NPI+IDQ YC S V+ +V + NI G+SA
Sbjct: 314 GGVGLATGISFRNVQMDNVKNPIIIDQFYCDMESSPQGCDHGSGVEVRDVVYENISGSSA 373
Query: 200 NKI--------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPAT 247
+ PC I + NI + +G T+ CS+V +G+ AT
Sbjct: 374 TPVGVKLNCNHPCTEIVMSNIRLIQT-----RDGSPCTAQCSHV----YGRAYNAT 420
>gi|413946315|gb|AFW78964.1| hypothetical protein ZEAMMB73_374088 [Zea mays]
Length = 175
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 64/159 (40%), Gaps = 36/159 (22%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNV 160
GHGIS+GSLGK + V + V C T T NIV NV
Sbjct: 18 GHGISIGSLGKNRTTDMVEDVKVDTCLLTNTTNGVRIKSWQGGTGFARDLRFENIVMRNV 77
Query: 161 ENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIG 210
NPI+IDQ YC V+ V F IRGTSA + +PC+++ +
Sbjct: 78 SNPIIIDQYYCDQPTPCANQTQAVEVRRVEFAGIRGTSATPQAISIACSDAVPCRDLELA 137
Query: 211 NINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATCV 249
N+N G T+LC G +P +C+
Sbjct: 138 NVNLTLEGGGAG----RATALCYRASGKSAGTVVPPSCL 172
>gi|7959975|gb|AAF71156.1|AF152754_1 polygalacturonase B [Actinidia chinensis]
gi|7959977|gb|AAF71157.1|AF152755_1 polygalacturonase B [Actinidia chinensis]
Length = 164
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 71/152 (46%), Gaps = 40/152 (26%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNV 160
GHGIS+GSLG G ++ V + V GT N+ +NV
Sbjct: 13 GHGISIGSLGSGKSEAYVSDVVVNGAKLFGTTNGVRIKTWQGGSGSASNITFQNLEMHNV 72
Query: 161 ENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIG 210
NPI+IDQ YC NK + S V+ N+ + NI+GTSA+ + PCQ I
Sbjct: 73 ANPIIIDQNYCDQNKPCPQQSSAVQVKNIVYQNIKGTSASDVAVTFDCSKRFPCQGI--- 129
Query: 211 NINWVYNGVNVKVE-GPETTSLCSNVKPTLFG 241
V GV+++ E G +LC+NVK + G
Sbjct: 130 ----VLEGVDLEREGGAAAKALCNNVKLSETG 157
>gi|356529897|ref|XP_003533523.1| PREDICTED: probable polygalacturonase At3g15720-like [Glycine max]
Length = 209
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 68/137 (49%), Gaps = 26/137 (18%)
Query: 84 LKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGIS 127
ITA DSPN +GI I S I HS IATGDDC+++ GHGIS
Sbjct: 18 FNITAPKDSPNIDGIDISESCYILIQHSTIATGDDCIAINSGASCINIIGVTCGPGHGIS 77
Query: 128 VGSLG--KGINDEEVVGLTVRNCTFTG----TNIVTNNVENPIVIDQLYCPYNKCNIKVP 181
VGSLG KG + G C + G +IV N +N I+IDQ Y K + K
Sbjct: 78 VGSLGTDKGRRIKTWPG----GCGYAGNISFEHIVLINTKNRIIIDQDYESEQKEDRKQT 133
Query: 182 SQVKTSNVRFNNIRGTS 198
S+V+ S V + + GTS
Sbjct: 134 SEVQISGVTYRYVNGTS 150
>gi|222618644|gb|EEE54776.1| hypothetical protein OsJ_02171 [Oryza sativa Japonica Group]
Length = 500
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 42/164 (25%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF + ++ I+ +S H+ +K+ ++ I++ DS NT+GIH+ ++ +
Sbjct: 230 IRFYSSFNVSVRNIRITNSPQCHLKFDSSGGIKVKNITISSPGDSLNTDGIHLQNTRDVD 289
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKG-------------INDE 138
I S I GDDC+S+ GHGIS+G LGK IN E
Sbjct: 290 IRSSSIGCGDDCISIQTGCSNVHMKNINCNPGHGISLGGLGKDNSLACVSDVFAEHINVE 349
Query: 139 EVV-GL----------TVRNCTFTGTNIVTNNVENPIVIDQLYC 171
+ G+ TVRN TF +N+ NV PI IDQ YC
Sbjct: 350 NALYGVRIKTWQGGKGTVRNVTF--SNVRVANVATPIAIDQFYC 391
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
F+V FGA +GI DDS+A AW+ AC +S VL+P G I
Sbjct: 27 FSVSSFGAAGNGIADDSEALVKAWKFACRIP--RSTVLLPSGHRFLI 71
>gi|338930686|emb|CBM42667.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 169
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 39/153 (25%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCTF-------------------TGTNIVTNNVEN- 162
GHGIS+GSLG+ ++++V + V++CT T +NI NV+
Sbjct: 14 GHGISIGSLGRYKDEKDVTDINVKDCTLKKSSNGLRIKAYEDAKSVLTCSNIHYENVKME 73
Query: 163 ----PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIG 208
PI+ID YCP C+ S+V +V F +I GTS ++ PC I
Sbjct: 74 DAGYPIIIDMKYCPNKICSASAGSKVTVKDVTFKDITGTSSTPEAVSLLCSDSTPCSGIT 133
Query: 209 IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
+ N+ Y+G N K T ++C N K + G
Sbjct: 134 MNNVKVEYSGSNNK-----TMAVCKNAKGSATG 161
>gi|357141781|ref|XP_003572345.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-2-like
[Brachypodium distachyon]
Length = 196
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 83/211 (39%), Gaps = 73/211 (34%)
Query: 95 TEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDE 138
T+GIHI + + I TGDDC+S+ GHGI VGSLG ++
Sbjct: 2 TDGIHIARTRDIHVLDCNINTGDDCMSIETGTENMYASRIPCGPGHGIGVGSLGDKNSEA 61
Query: 139 EVVGLTVRNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPY-- 173
+V +T+ +GT I+ ++V+ P++I Q YC
Sbjct: 62 QVSNITIYKAHLSGTTNGTRIKVVAMRERVRKDITFQDIIMEDDVKKPVIIHQNYCTRAD 121
Query: 174 ----NKCNIKVPSQVKTSNVRFNNIRGT-----------SANKIPCQNIGIGNINWVYNG 218
C + + V+ SNV F NIRGT S++ +PC +I +
Sbjct: 122 PSKPKACKKQTSAAVELSNVPFKNIRGTITATKEAIRLDSSDTVPCHDILL--------- 172
Query: 219 VNVKVEGPETTSLCSNVKPTLF-GKQIPATC 248
TTS C N K F IP TC
Sbjct: 173 -------EATTSTCKNAKLKKFLADVIPETC 196
>gi|338930684|emb|CBM42666.1| group 13 grass pollen allergen [Paspalum notatum]
Length = 169
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 71/153 (46%), Gaps = 39/153 (25%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCTF-------------------TGTNIVTNNVEN- 162
GHGIS+GSLG+ ++++V + V++CT T +NI NV+
Sbjct: 14 GHGISIGSLGRYKDEKDVTDINVKDCTLKKSTNGLRIKAYEDAKSVLTCSNIHYENVKME 73
Query: 163 ----PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIG 208
PI+ID YCP C+ S+V +V F +I GTS ++ PC I
Sbjct: 74 DAGYPIIIDMKYCPNKICSASAGSKVTVKDVTFKDITGTSSTPEAVSLLCSDSTPCSGIT 133
Query: 209 IGNINWVYNGVNVKVEGPETTSLCSNVKPTLFG 241
+ N+ Y+G N K T ++C N K + G
Sbjct: 134 MNNVKVEYSGSNNK-----TMAVCKNAKGSATG 161
>gi|226533566|ref|NP_001151374.1| polygalacturonase precursor [Zea mays]
gi|195646264|gb|ACG42600.1| polygalacturonase precursor [Zea mays]
Length = 429
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 70/265 (26%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F ++ GI +S+ +H+ +++ N L++T+ S +T+GIH+ S
Sbjct: 150 AVHFEDCQGISVKGITLQNSQSYHLTFTRSSDVEANYLRVTSPEHSVDTKGIHLVDSYNV 209
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLG------------------ 132
+ ++I+TGDDCVS+ GHGIS+G+LG
Sbjct: 210 HVMDNLISTGDDCVSIVGNCTDVRLRAISCGPGHGISIGTLGVNSSVDYVEKIKVDTLFI 269
Query: 133 ---------KGINDEEVVGLTVRNCTFTGTNIVTNNVENPIVIDQ---------LYCPYN 174
+ D G R F +IV NV NPI++DQ
Sbjct: 270 SNAENGVRVRTTEDGGGGGGFARKVKF--ESIVMRNVTNPIIVDQGISSDDPPPSSPEAV 327
Query: 175 KCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVE 224
+ V+ + + +I GTSA++ PC+ + + N+N +V+
Sbjct: 328 ALAATATAAVQVEKINYIDITGTSASERAVTFSCSDARPCRRLSLVNVNL------TQVD 381
Query: 225 GPETTSLCSNVKPTLFGKQIPATCV 249
G E +S C G +P +C+
Sbjct: 382 GSEASSYCRQAFGRSVGTVVPESCL 406
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREAC 29
+ + DFGAV DG+ DD+KA AW AC
Sbjct: 28 LLTLYDFGAVGDGVADDTKALAGAWTAAC 56
>gi|86276858|gb|ABC87913.1| polygalacturonase precursor [Glycine max]
Length = 336
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 16/108 (14%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
P G IRF ++ + G+K +S FH+ GC + ++ L I++ SPNT+GIH+
Sbjct: 221 PCGSPAMIRFFMSSNLKVNGLKIQNSPQFHMIFNGCQGVLIDKLSISSPKLSPNTDGIHV 280
Query: 101 GSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLG 132
+S I +S+I+ GDDC+S+G HGIS+GSLG
Sbjct: 281 ENSKYVGIYNSMISNGDDCISIGPGSSNVDIAGLTCGPSHGISIGSLG 328
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VF+V+ FGAV DG DD++AF AW+ AC + S V++ P Y+
Sbjct: 94 VFDVRSFGAVGDGCADDTRAFGAAWKAAC---AVDSGVVLAPENYI 136
>gi|86276862|gb|ABC87915.1| polygalacturonase precursor [Glycine max]
Length = 336
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 16/108 (14%)
Query: 41 PPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHI 100
P G IRF ++ + G+K +S FH+ GC + ++ L I++ SPNT+GIH+
Sbjct: 221 PCGSPAMIRFFMNSNLKVNGLKIQNSPQFHMIFNGCQGVLIDKLPISSPKLSPNTDGIHV 280
Query: 101 GSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLG 132
+S I +S+I+ GDDC+S+G HGIS+GSLG
Sbjct: 281 ENSKYVGIYNSMISNGDDCISIGPGSSNVDIAGLTCGPSHGISIGSLG 328
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
VF+V+ FGAV DG DD++AF AW+ AC + S V++ P Y+
Sbjct: 94 VFDVRSFGAVGDGCADDTRAFRAAWKAAC---AVDSGVVLAPENYI 136
>gi|326514730|dbj|BAJ99726.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 434
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 59/255 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
++ F D ++ GI +S+ H+ CYN++ N L++T+ SP T G+ + SS
Sbjct: 166 ALHFEDCQDVSVKGITVQNSQREHLVFTRCYNVEANYLRVTSPEYSPGTAGVLVVSSTNV 225
Query: 107 EISHSVIATGDDCVSL--------GHGISVG-----------------SLGKGINDEEVV 141
I + + G DCVS+ IS G + K D +
Sbjct: 226 HIKDDLFSVGGDCVSIVGNCSDVRLRAISCGPGLGISIGGLGENQTSHKIEKIKTDTMFI 285
Query: 142 -----GLTVRN----CTFTG----TNIVTNNVENPIVIDQLYCPYNK---CNIKVPSQVK 185
G+ V+ C F I+ NV NPI+IDQ Y N+ C S V
Sbjct: 286 SNTKNGVRVKTYENGCGFARKVKFAQIMMRNVANPIIIDQHYSASNRGTHCGAPNGSAVA 345
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNV-KVEGPETTSLCSN 234
N+ + +I GTSA + +PC+ + + +GVN+ V G T++ C
Sbjct: 346 VENINYIDITGTSATEQAVTFACSDAMPCRRLYL-------DGVNLTTVGGGNTSAYCHQ 398
Query: 235 VKPTLFGKQIPATCV 249
G +P +C+
Sbjct: 399 AFGKHVGNVLPESCL 413
Score = 40.0 bits (92), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
+ ++ DFGAV DGI +D++A AW+ AC G + + VP GK I
Sbjct: 36 LLSLDDFGAVGDGIANDTQALVDAWKAACA-AGDNTYLNVPAGKSYQI 82
>gi|7959973|gb|AAF71155.1|AF152753_1 polygalacturonase A [Actinidia chinensis]
Length = 171
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 40/152 (26%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNV 160
GHGIS+GSLG G ++ V + V GT N+ +NV
Sbjct: 13 GHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNV 72
Query: 161 ENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIG 210
ENPI+IDQ YC +K + S V+ N+ + NI+GT A+ + PCQ I
Sbjct: 73 ENPIIIDQNYCDQDKPCQEQSSAVQVKNIFYKNIKGTCASNVAITFDCSKRFPCQGI--- 129
Query: 211 NINWVYNGVNVKVE-GPETTSLCSNVKPTLFG 241
V V++++E G +LC+NV+ + G
Sbjct: 130 ----VLEDVDLEIEGGAAAKALCNNVELSETG 157
>gi|296084980|emb|CBI28395.3| unnamed protein product [Vitis vinifera]
Length = 77
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/49 (57%), Positives = 37/49 (75%)
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI 202
+I+ NNV NPI+I+Q YCPY++C KVPSQVK S+V F I G SA ++
Sbjct: 24 DIIMNNVGNPILINQEYCPYDQCQAKVPSQVKISDVSFQGICGMSAMQV 72
>gi|7959971|gb|AAF71154.1|AF152752_1 polygalacturonase A, partial [Actinidia chinensis]
Length = 171
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 71/152 (46%), Gaps = 40/152 (26%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNV 160
GHGIS+GSLG G ++ V + V GT N+ +NV
Sbjct: 13 GHGISIGSLGYGNSEAHVPDVVVNGAKLCGTTNGVRIKTWQGGSGSASNIKFQNVEMHNV 72
Query: 161 ENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN----------KIPCQNIGIG 210
ENPI+IDQ YC +K + S V+ N+ + NI+GT A+ + PCQ I
Sbjct: 73 ENPIIIDQNYCDQDKPCQEQSSAVQVKNIFYKNIKGTCASNVAITFDCSKRFPCQGI--- 129
Query: 211 NINWVYNGVNVKVE-GPETTSLCSNVKPTLFG 241
V V++++E G +LC+NV+ + G
Sbjct: 130 ----VLEDVDLEIEGGAAAKALCNNVELSETG 157
>gi|384500306|gb|EIE90797.1| hypothetical protein RO3G_15508 [Rhizopus delemar RA 99-880]
Length = 383
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 65/246 (26%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI----TAHADSPNTEGIHIGSS 103
IRF L +S ++ + V+S H+ + NL L+++ + T+ + NT+ + + SS
Sbjct: 136 IRF-ALTNSKVSHLNIVNSPRAHMGVTNSKNLVLDNITLKTASTSSKLAKNTDALDVSSS 194
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRN 147
G +S + GDDC+++ GHG SVGSLGKG E V + + N
Sbjct: 195 EGIIFQNSHLTVGDDCLAINGGVTNITLNNINCNGGHGFSVGSLGKGGKSETVKTVRILN 254
Query: 148 CTFTG----------------------TNIVTNNVENPIVIDQLYCPYNK---CNIKVPS 182
+ T +NI NNV+NPI+I YC N+ CN S
Sbjct: 255 SSCTNCQNGVRIKTWPGGKGSVSDVKYSNIKLNNVDNPIIITTHYCDKNQQSYCNGNDAS 314
Query: 183 QVKTSNVRFNNIRGTSAN------------KIPCQNIGIGNINWVYNGVNVKVEGPETTS 230
+ +V + I G+ ++ K PC + +GVN+ +
Sbjct: 315 SLNIKDVSISGITGSVSSKGNPIVSIDCSTKTPCTGFSV-------SGVNISKSSKTKKN 367
Query: 231 LCSNVK 236
+C N++
Sbjct: 368 VCKNLQ 373
>gi|384492930|gb|EIE83421.1| hypothetical protein RO3G_08126 [Rhizopus delemar RA 99-880]
Length = 402
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 45/201 (22%)
Query: 52 FLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADS----PNTEGIHIGSSNGSE 107
+ +S + K +++ H+ + NL + + + + S NT+ + I SS+G
Sbjct: 159 MVTNSVFSNFKIINAPRAHMGVTNAKNLVIEGVTLNTASKSSKPPKNTDALDISSSSGII 218
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV-----R 146
+SV+ GDDC ++ GHG SVGSLGKG D+ V + V
Sbjct: 219 FRNSVLNIGDDCTAINGGVTNVTLSKITCNGGHGFSVGSLGKGGKDDSVRTVRVLDSVCN 278
Query: 147 NC-------TFTG----------TNIVTNNVENPIVIDQLYCPYNK---CNIKVPSQVKT 186
NC T+ G N+ NNVENP+++ YC N+ C S +
Sbjct: 279 NCQNGVRVKTWPGGKGSVSDVLYRNVQLNNVENPVIVTTHYCDKNQMSYCTKNADSSLSI 338
Query: 187 SNVRFNNIRGTSANKIPCQNI 207
S V F+ I G+ K P +I
Sbjct: 339 SGVTFDTITGSVTGKKPIVSI 359
>gi|300681554|emb|CBH32652.1| polygalacturonase precursor, putative,expressed [Triticum aestivum]
Length = 443
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 104/259 (40%), Gaps = 62/259 (23%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++ F D ++ GI + + H+ C++++ N L++T+ SP T G+ + SS
Sbjct: 161 MALHFEGCRDVSVKGITVQNGQRQHLVFTRCHDVEANYLRVTSPEYSPGTVGVLVVSSTD 220
Query: 106 SEISHSVIATGDDCVSLG---------------------------------HGISVGSLG 132
I H + + G DCVS+ H I + ++
Sbjct: 221 VHIKHDLFSVGGDCVSIVGNSSDIRVKAVSCGPGLGISIGGLGENQSNDRIHKIKMDTML 280
Query: 133 KGINDEEVVGLTVRN-CTFTG----TNIVTNNVENPIVIDQLYCPYNKCNIKVP------ 181
V T +N C F +I+ NV NPIVIDQ Y + N P
Sbjct: 281 LSNTKNGVRIKTYKNGCGFARKVKFAHIMMRNVANPIVIDQHYYSASNSNRGTPCGTPNV 340
Query: 182 SQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTS- 230
S V +++ +I GTSA + +PC+ + + +GVN+K G +TS
Sbjct: 341 SAVAVEKIKYIDITGTSATERAVTFACSDAMPCRRLYL-------DGVNLKTAGGGSTSA 393
Query: 231 LCSNVKPTLFGKQIPATCV 249
C G +P +C+
Sbjct: 394 YCHQAFGKHVGDVLPESCL 412
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI 48
+ ++ DFGAV DGI +D++AF AW+ AC G + + VP G+ I
Sbjct: 32 LLSLDDFGAVGDGIANDTQAFVDAWKSACATGGT-TYLNVPAGRSYQI 78
>gi|383289794|gb|AFH02978.1| polygalacturonase 1, partial [Psidium guajava]
Length = 100
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 46/77 (59%), Gaps = 16/77 (20%)
Query: 93 PNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGIN 136
PNT+ +HIG+S G I +S I TGDDCVS+ GHGIS+GSLGK
Sbjct: 1 PNTDXVHIGASTGVTILNSKIGTGDDCVSIGPGSNNLWIENLACGPGHGISIGSLGKDQQ 60
Query: 137 DEEVVGLTVRNCTFTGT 153
++ V +TV+ TFTGT
Sbjct: 61 EDGVQNVTVKTVTFTGT 77
>gi|384485854|gb|EIE78034.1| hypothetical protein RO3G_02738 [Rhizopus delemar RA 99-880]
Length = 383
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI----TAHADSPNTEGIHIGSSNGSEI 108
L DS + ++S H+ + NL L ++ + T+ ++ NT+ + + SS+G
Sbjct: 140 LTDSNVGYFTIINSPRAHLGVTNSNNLVLTNITLNTASTSDNEAKNTDALDVSSSSGVIF 199
Query: 109 SHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV-----RN 147
S + GDDC ++ GHG SVGSLGKG E V + V N
Sbjct: 200 KDSTLTIGDDCTAINGGVTNITLSNIICNGGHGFSVGSLGKGGKTETVKTVRVLDSVCNN 259
Query: 148 C-------TFTG----------TNIVTNNVENPIVIDQLYCPYNK---CNIKVPSQVKTS 187
C T+ G +N+ NNV+NP+++ YC N+ CN S + S
Sbjct: 260 CQNGVRIKTWPGGEGSVSDVKYSNVKLNNVDNPVIVTTHYCDKNQQSYCNGNDDSSLTIS 319
Query: 188 NVRFNNIRGTSANK 201
V FN I G+ ++K
Sbjct: 320 GVTFNKITGSVSSK 333
>gi|147821308|emb|CAN74591.1| hypothetical protein VITISV_041994 [Vitis vinifera]
Length = 415
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 111/296 (37%), Gaps = 98/296 (33%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVL-VP-----------------P 42
+F+V FGA DG+ DDSKAF+ W AC +K+A + +P P
Sbjct: 79 IFDVPSFGARGDGVSDDSKAFQVTWSAAC---AVKNATIKIPSKFRLLISPITLQGPCEP 135
Query: 43 GKYLSI----------------------RFNFLNDSTITGIKSVD---SRYFHI------ 71
G L I F L+D I G +++ S ++ I
Sbjct: 136 GLVLQIDGMIVAPGGPRMWLKPELLQWINFKNLHDFVIQGRGTINGQGSAWWWITPRILQ 195
Query: 72 ----NILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHGIS 127
NL + D++I N+ H+ N + + V+ + + S
Sbjct: 196 NQAVRFYSSLNLTIRDIQIQ------NSPRCHLKFDNCAGVKTLVLTVTQNSLQF----S 245
Query: 128 VGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPIV 165
+G LGK V + V+N T +I +NV+ PI+
Sbjct: 246 IGGLGKDGTLACVSNIVVQNSIMVDTLYGIRIKTWQGGVGSVKSVIFXDIEVSNVKVPIM 305
Query: 166 IDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNI 212
IDQ YC C K + V +N+ +N I GT A + IPC NI +GN+
Sbjct: 306 IDQFYCEGGTCRNKTDA-VSLTNITYNQINGTYATQAIHLACSDSIPCTNISMGNV 360
>gi|302760889|ref|XP_002963867.1| hypothetical protein SELMODRAFT_405348 [Selaginella moellendorffii]
gi|300169135|gb|EFJ35738.1| hypothetical protein SELMODRAFT_405348 [Selaginella moellendorffii]
Length = 601
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 69/141 (48%), Gaps = 26/141 (18%)
Query: 86 ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVG 129
I + DSPNT+GIH+ + I + ++ GDDCVS+ GHGIS+G
Sbjct: 163 IDSPGDSPNTDGIHVSGTTNIVIDKADVSAGDDCVSIVSGSDNVKVTNSRCGPGHGISIG 222
Query: 130 SLGKGINDEEVVGLTVRNCTFTGTN----------IVTNNVENPIVIDQLYCPYNKCNIK 179
SLGKG + + V + V+ ++ ++ N E P Q YC +
Sbjct: 223 SLGKGGSFDTVTNVLVQGIKIWRSHGVRISTVISLLLLLNCEQPGTRLQNYCNGAQNCQN 282
Query: 180 VPSQVKTSNVRFNNIRGTSAN 200
+ ++ SN+ F+NIRGTSA+
Sbjct: 283 QGTSLEISNITFSNIRGTSAS 303
>gi|384490085|gb|EIE81307.1| hypothetical protein RO3G_06012 [Rhizopus delemar RA 99-880]
Length = 385
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 100/242 (41%), Gaps = 62/242 (25%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSP----NTEGIHIGSSNGSEIS 109
NDS I G ++S H+N+ NL L+D + +++ NT+ + + S+G
Sbjct: 143 NDSIIGGFTIINSPRAHLNVTNSTNLVLHDFTLHTVSNNSYLPKNTDALDLYHSSGITFR 202
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT---- 149
S++ GDDCV++ GHG S+GSLG G + V + RN T
Sbjct: 203 DSMLTIGDDCVAIKEDVEKVIVSNVTCRGGHGYSIGSLGIGGRKDYVKHVNFRNSTCIDC 262
Query: 150 ------------------FTGTNIVTNNVENPIVIDQLYCPYN---KCNIKVPSQVKTSN 188
+I+ NV+NPI++ YC N CN + + S+
Sbjct: 263 ENGVRVKTWAGGKGIVEDINYNDIILQNVDNPILVTTHYCDPNVIEYCNGNDDNSLNISS 322
Query: 189 VRFNNIRGTSAN------------KIPCQNIGIGNINW-----VYNGVNVKVEGPETTSL 231
+ F +I GT++ + PC +I I+ + V V +EG + S
Sbjct: 323 IHFKDITGTASALGNPIVNVNCSIESPCSDITFSGIDITKASNTTDNVCVYLEGSDEVSE 382
Query: 232 CS 233
CS
Sbjct: 383 CS 384
>gi|384500217|gb|EIE90708.1| hypothetical protein RO3G_15419 [Rhizopus delemar RA 99-880]
Length = 383
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 107/246 (43%), Gaps = 65/246 (26%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI----TAHADSPNTEGIHIGSS 103
IRF L +S ++ V++ H+ NL L+++ + T+ + NT+ + + SS
Sbjct: 136 IRF-ALTNSKVSHFNIVNAPRAHMGATNSKNLVLDNITLKTASTSSKLAKNTDALDVSSS 194
Query: 104 NGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGL---- 143
G +S + GDDC+++ GHG SVGSLGKG E V +
Sbjct: 195 EGIVFQNSQLTIGDDCLAINGGVTNLTVYNVICNGGHGFSVGSLGKGGKSETVKMVRISE 254
Query: 144 -TVRNC-------TFTG----------TNIVTNNVENPIVIDQLYCPYNK---CNIKVPS 182
T NC T+ G TN+ NNV+NPI+I YC N+ CN S
Sbjct: 255 STCNNCQNGIRIKTWPGGKGSVSDVKYTNMKLNNVDNPILITTHYCDKNQQSYCNGNDAS 314
Query: 183 QVKTSNVRFNNIRGTSAN------------KIPCQNIGIGNINWVYNGVNVKVEGPETTS 230
+ S+V + G+ ++ K PC+N I +GV++ +
Sbjct: 315 SLSISDVTISGATGSVSSKGNPIVSINCSTKTPCKNFSI-------SGVSISKASKTKKN 367
Query: 231 LCSNVK 236
+C+N++
Sbjct: 368 VCTNLQ 373
>gi|938309|emb|CAA46684.1| polygalacturonase [Zea mays]
Length = 95
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 46/64 (71%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C + + D+ +TA DSPNT+GIH+G S+G
Sbjct: 32 SLVMDFVNNGEVSGVTLLNSKFFHMNMYXCKXMLIKDVTVTAPGDSPNTDGIHMGDSSGI 91
Query: 107 EISH 110
I++
Sbjct: 92 TITN 95
>gi|449454838|ref|XP_004145161.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
Length = 236
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 46/81 (56%), Gaps = 15/81 (18%)
Query: 178 IKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPE 227
IKVPS++K S V F NIRGTSA + PC+ + + +I+ Y+G EGP
Sbjct: 149 IKVPSKIKISKVSFKNIRGTSATAVAVKIVCSQSNPCEEVEVADIDLTYSG----SEGP- 203
Query: 228 TTSLCSNVKPTLFGKQIPATC 248
S C+NVKP + GKQ P C
Sbjct: 204 IKSQCANVKPVITGKQNPPIC 224
>gi|157420121|gb|ABV55549.1| polygalacturonase [Manilkara zapota]
Length = 211
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 25 WREACNWDGIKSAVLVPPGKYLSIRFNFLN--DSTITGIKSVDSRYFHINILGCYNLKLN 82
W+ +C I A+ P K F N + + +K +++ H++ C N++ +
Sbjct: 101 WKNSCK---INKAL---PCKDAPTALTFYNCENLVVRNLKIQNAQQIHVSFEECVNVQAS 154
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHG 125
+L +TA SPNT+GIH+ + +IS SVI TGDDC+S+ G
Sbjct: 155 NLVVTAPKKSPNTDGIHVARTRNIQISSSVIGTGDDCISIASG 197
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 7 FGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFN 51
FGA DG DD++AF+ AW++AC+ G + +LVP YL IRF+
Sbjct: 1 FGARGDGRSDDTEAFKNAWKKACSSTG--AVLLVPQKNYLVKPIRFS 45
>gi|395328396|gb|EJF60789.1| hypothetical protein DICSQDRAFT_62163 [Dichomitus squalens LYAD-421
SS1]
Length = 412
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 70/160 (43%), Gaps = 48/160 (30%)
Query: 87 TAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGS 130
T+ D+ NT+G I S+ I+ S I GDDCVS HGISVGS
Sbjct: 197 TSSNDAKNTDGWDIFRSDNVTIADSNITNGDDCVSFKPNSTNILVSNLSCNGSHGISVGS 256
Query: 131 LGKGINDEEVV-----------------------------GLTVRNCTFTGTNIVTNNVE 161
LG+ + ++V G+ V+N TF G V +NV+
Sbjct: 257 LGQYAGEYDIVENVLATNIRMSNAQNGARIKAWAGKDVGSGI-VKNITFEG--FVESNVD 313
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK 201
NP++IDQ Y + K PS ++ F NI GTS+ K
Sbjct: 314 NPVIIDQCYETSSSDCTKYPSNTYIEDIWFTNISGTSSGK 353
>gi|30349279|gb|AAP22000.1| endopolygalacturonase [Prunus persica]
Length = 124
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 57/108 (52%), Gaps = 12/108 (11%)
Query: 22 ETAWREACNWDGIKSAVLVPPG----KYLSIRFNFLNDSTITGIKSVDSRYFHINILGCY 77
E W+ +C + K P K ++R N LN D++ H++ C
Sbjct: 9 EQWWQNSCKINKSKPCKDAPTALIFQKCKNLRVNNLNIQ--------DAQQIHVSFQKCM 60
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLGHG 125
N++ ++L I A SPNT+GIH+ + I++SVIATGDDC+S+ +G
Sbjct: 61 NVQASNLSIIAPEKSPNTDGIHVTDTQNILITNSVIATGDDCLSIVNG 108
>gi|392560866|gb|EIW54048.1| glycoside hydrolase family 28 protein [Trametes versicolor
FP-101664 SS1]
Length = 410
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 69/160 (43%), Gaps = 48/160 (30%)
Query: 87 TAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGS 130
T+ + NT+G I S+ I+ S I GDDCVS HGISVGS
Sbjct: 195 TSKNAAKNTDGWDIFRSDNVIIADSNIDNGDDCVSFKPNATNILVSNLSCNGSHGISVGS 254
Query: 131 LGKGINDEEVV-----------------------------GLTVRNCTFTGTNIVTNNVE 161
LG+ + ++V GL V+N TF G V +NV+
Sbjct: 255 LGQYAGEYDIVQNVLATNIRMSNAQNGARIKAWAGKGVGAGL-VKNITFDG--FVESNVD 311
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK 201
NP+VIDQ Y K PS +V FNNI GTS+ K
Sbjct: 312 NPVVIDQCYMTSADDCAKYPSNTYIQDVWFNNISGTSSGK 351
>gi|312136085|ref|YP_004003423.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
gi|311776136|gb|ADQ05623.1| glycoside hydrolase family 28 [Caldicellulosiruptor owensensis OL]
Length = 447
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI F N+ TI GIK V+S + +N + C N+ ++++KI DSPNT+GI+ S G
Sbjct: 132 SICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGV 191
Query: 107 EISHSVIATGDDCVSLGHG 125
IS+ I GDDCV+L G
Sbjct: 192 RISNCYIDVGDDCVTLKSG 210
>gi|302872741|ref|YP_003841377.1| polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
gi|302575600|gb|ADL43391.1| Polygalacturonase [Caldicellulosiruptor obsidiansis OB47]
Length = 447
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI F N+ TI GIK V+S + +N + C N+ ++++KI DSPNT+GI+ S G
Sbjct: 132 SICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGV 191
Query: 107 EISHSVIATGDDCVSLGHG 125
IS+ I GDDCV+L G
Sbjct: 192 RISNCYIDVGDDCVTLKSG 210
>gi|312126393|ref|YP_003991267.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
gi|311776412|gb|ADQ05898.1| glycoside hydrolase family 28 [Caldicellulosiruptor hydrothermalis
108]
Length = 447
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI F N+ TI GIK V+S + +N + C N+ ++++KI DSPNT+GI+ S G
Sbjct: 132 SICFYRCNNVTIEGIKIVNSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGV 191
Query: 107 EISHSVIATGDDCVSLGHG 125
IS+ I GDDCV+L G
Sbjct: 192 RISNCYIDVGDDCVTLKSG 210
>gi|384490346|gb|EIE81568.1| hypothetical protein RO3G_06273 [Rhizopus delemar RA 99-880]
Length = 382
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 49/233 (21%)
Query: 52 FLNDSTITGIKSVDSRYFHINILGCYNLKLND--LKITAHADSP--NTEGIHIGSSNGSE 107
+ +S + K ++S H+ NL + + LK + + P NT+ + I SS+
Sbjct: 139 MVTNSVFSNFKIINSPRAHMGATNSNNLVIENVTLKTASKSSKPAKNTDALDISSSSNII 198
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDE-----EVVGLTVR 146
+S + GDDC ++ GHG SVGSLGKG D+ V+ T
Sbjct: 199 FRNSELNVGDDCTAINGGVTNVTLSKITCNGGHGFSVGSLGKGGKDDTVKTIRVLDSTCN 258
Query: 147 NC-------TFTG----------TNIVTNNVENPIVIDQLYCPYNK---CNIKVPSQVKT 186
NC T+ G N+ NNVENP+++ YC N+ C +
Sbjct: 259 NCQNGVRVKTWPGGKGSVSDVIYKNVKLNNVENPVIVTTHYCDKNQMSYCTKNADRSLSI 318
Query: 187 SNVRFNNIRGTSANKIPCQNIGIGN----INWVYNGVNVKVEGPETTSLCSNV 235
V F+NI G+ K P NI + VN+K ++C+N+
Sbjct: 319 KGVTFDNITGSVTGKKPIINIDCSKSTPCTGFSLKNVNIKKASKTPKNVCNNL 371
>gi|222530340|ref|YP_002574222.1| galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
gi|222457187|gb|ACM61449.1| Galacturan 1,4-alpha-galacturonidase [Caldicellulosiruptor bescii
DSM 6725]
Length = 447
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI F N+ TI GIK ++S + +N + C N+ ++++KI DSPNT+GI+ S G
Sbjct: 132 SICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNPYDSPNTDGINPESCKGV 191
Query: 107 EISHSVIATGDDCVSLGHG 125
IS+ I GDDCV+L G
Sbjct: 192 RISNCYIDVGDDCVTLKSG 210
>gi|86276860|gb|ABC87914.1| polygalacturonase precursor [Glycine max]
Length = 217
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 39/142 (27%)
Query: 94 NTEGIHIGSSNGSEISHSVIATGDDCVSLG----------------HGISVGSLGKGIND 137
NT+GIH+ +S I +S+I+ GDDC+S+G HGIS+GSLG +
Sbjct: 1 NTDGIHVENSKYVGIYNSMISNGDDCISIGPGSSNVDIAGLTCGPSHGISIGSLGVHNSQ 60
Query: 138 EEVVGLTVRNC------------TFTG----------TNIVTNNVENPIVIDQLYCPYNK 175
V LTVR+ T+ G NI NV N I+IDQ YC +
Sbjct: 61 ACVSNLTVRDSIIRESDNGLRIKTWQGGMGSVSSLGFENIQMENVGNCIIIDQYYCMSKE 120
Query: 176 CNIKVPSQVKTSNVRFNNIRGT 197
C + S V ++V ++NI+GT
Sbjct: 121 C-LNQTSAVHVNDVSYSNIKGT 141
>gi|312621274|ref|YP_004022887.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
gi|312201741|gb|ADQ45068.1| glycoside hydrolase family 28 [Caldicellulosiruptor kronotskyensis
2002]
Length = 447
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI F N+ TI GIK ++S + +N + C N+ ++++KI DSPNT+GI+ S G
Sbjct: 132 SICFYRCNNVTIEGIKIINSPSWTVNPIECQNVTVHNIKIQNPYDSPNTDGINPESCKGV 191
Query: 107 EISHSVIATGDDCVSLGHG 125
IS+ I GDDCV+L G
Sbjct: 192 RISNCYIDVGDDCVTLKSG 210
>gi|938308|emb|CAA46681.1| polygalacturonase [Zea mays]
Length = 95
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 46/64 (71%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+ + C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 32 SLVMDFVNNGEVSGVTLLNSKFFHMKMYQCKDMLIKDVTVTALGDSPNTDGIHMGDSSGI 91
Query: 107 EISH 110
I++
Sbjct: 92 TITN 95
>gi|315570530|gb|ADU33269.1| glycoside hydrolase family protein 28 [Callosobruchus maculatus]
Length = 395
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 94/221 (42%), Gaps = 52/221 (23%)
Query: 40 VPPGKYLSIRFNFLN--DSTITGIKSVDSRYFHINILGCYNLKLNDLKI----TAHADSP 93
+PP I NF + + + G S F++NIL + ++ ++I + H P
Sbjct: 139 LPPPATRPIFINFFDCHNVVLKGFTIKSSPMFNVNILYSNGIVIDGIRIRNPESYHGKGP 198
Query: 94 NTEGIHIGSSNGSEISHSVIATGDDCVSL---GHG---------------ISVGSLGKGI 135
NT+GI++ S I+ +ATGDDC+++ GHG +S+G G I
Sbjct: 199 NTDGINVVSVRRLHITGVDVATGDDCIAINAWGHGKERIPTEDVLIEDSHMSIGHGGVSI 258
Query: 136 NDEEVVGL---TVRNCTFTGT----------------------NIVTNNVE-NPIVIDQL 169
GL TVRNC F GT NIV NN+ I I L
Sbjct: 259 GSVTAGGLRNITVRNCVFDGTTRGLLIKTNRERGGTIEDIHYENIVMNNMRWEGIAITDL 318
Query: 170 YCPYNKCNIKVPSQVK-TSNVRFNNIRGTSANKIPCQNIGI 209
Y + + Q N+++NN+RG S+ K P IG+
Sbjct: 319 YNDKDSGRKPIGDQTPFVRNIKYNNVRG-SSKKSPIMLIGL 358
>gi|938311|emb|CAA46683.1| polygalacturonase [Zea mays]
Length = 95
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 46/64 (71%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+ + C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 32 SLVMDFVNNXEVSGVTLLNSKFFHMKMYQCKDMLIKDVTVTALGDSPNTDGIHMGDSSGI 91
Query: 107 EISH 110
I++
Sbjct: 92 TITN 95
>gi|384493142|gb|EIE83633.1| hypothetical protein RO3G_08338 [Rhizopus delemar RA 99-880]
Length = 381
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 83/199 (41%), Gaps = 47/199 (23%)
Query: 84 LKITAHADSP--NTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
LK + + P NT+ + I SS S + GDDC ++ GHG
Sbjct: 172 LKTASSSSKPAKNTDALDISSSKNIVFRDSELTIGDDCTAINGGVTNVTLSNIVCNGGHG 231
Query: 126 ISVGSLGKG-----INDEEVVGLTVRNC-------TFTG----------TNIVTNNVENP 163
SVGSLGKG + V+ T NC T+ G N+ NNVENP
Sbjct: 232 FSVGSLGKGGATDTVKTVRVLDSTCNNCQNGVRVKTWPGGKGSVSDVVYRNVKLNNVENP 291
Query: 164 IVIDQLYCPYNK---CNIKVPSQVKTSNVRFNNIRGTSANKIPCQNIGIGNIN----WVY 216
+++ YC N+ C S + + V F+NI G+ K P NI + +
Sbjct: 292 VIVTTHYCDKNQMSYCTKNADSSLSITGVTFDNISGSVTGKKPIINIDCSTKSPCSGFTL 351
Query: 217 NGVNVKVEGPETTSLCSNV 235
N VN+K ++C+N+
Sbjct: 352 NQVNIKKASSTPKNVCNNL 370
>gi|312794141|ref|YP_004027064.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181281|gb|ADQ41451.1| glycoside hydrolase family 28 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 447
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI F N+ TI GIK ++S + +N + C N+ ++++KI DSPNT+GI+ S G
Sbjct: 132 SICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGV 191
Query: 107 EISHSVIATGDDCVSLGHG 125
IS+ I GDDCV+L G
Sbjct: 192 RISNCYIDVGDDCVTLKSG 210
>gi|297736262|emb|CBI24900.3| unnamed protein product [Vitis vinifera]
Length = 317
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGI 61
+N+K+F G D + + W+ C + I+ ++ P I F ND + G+
Sbjct: 171 YNIKNFQVEGQGTIDGNG--KIGWKNLCKINIIQPCIVAP----TLISFIQCNDLKVYGL 224
Query: 62 KSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVS 121
+++ H++ N++ ++++T+ SPNT+GIH+ S +I VI GDDC+S
Sbjct: 225 NVQNAQEMHVSFEQSVNVQAFNIRVTSPGTSPNTDGIHVTRSENVQIIKPVIQAGDDCIS 284
Query: 122 LGHG 125
+ +G
Sbjct: 285 IVNG 288
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
NV++FGA DG DD++AF+ AW E C+ + +AVLV P
Sbjct: 86 NVENFGAEGDGETDDTEAFKKAWDETCSSN---TAVLVVP 122
>gi|344995379|ref|YP_004797722.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963598|gb|AEM72745.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 447
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI F N+ TI GIK ++S + +N + C N+ ++++KI DSPNT+GI+ S G
Sbjct: 132 SICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGV 191
Query: 107 EISHSVIATGDDCVSLGHG 125
IS+ I GDDCV+L G
Sbjct: 192 RISNCYIDVGDDCVTLKSG 210
>gi|344995681|ref|YP_004798024.1| glycoside hydrolase family protein [Caldicellulosiruptor
lactoaceticus 6A]
gi|343963900|gb|AEM73047.1| glycoside hydrolase family 28 [Caldicellulosiruptor lactoaceticus
6A]
Length = 443
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
SI F N+ TI GIK ++S + +N + C N+ ++++KI DSPNT+GI+ S G
Sbjct: 128 SICFYKCNNVTIEGIKIINSPSWTVNPIECQNVTVHNVKIQNPYDSPNTDGINPESCKGV 187
Query: 107 EISHSVIATGDDCVSLGHG 125
IS+ I GDDCV+L G
Sbjct: 188 RISNCYIDVGDDCVTLKSG 206
>gi|384490094|gb|EIE81316.1| hypothetical protein RO3G_06021 [Rhizopus delemar RA 99-880]
Length = 385
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 88/217 (40%), Gaps = 57/217 (26%)
Query: 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD----SPNTEGIHIGSSNGSEIS 109
NDS+ ++S H+N+ NL L+D I ++ + NT+ + + S+G
Sbjct: 143 NDSSFGNFNIINSPRAHLNVTNSTNLLLHDFIIHTVSNNSNPAKNTDALDLYHSSGVIFR 202
Query: 110 HSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT---- 149
S + GDDC+++ GHG S+GSLG G + V + V N T
Sbjct: 203 DSDLTIGDDCLAVKENVTKVTVSNITCRGGHGYSIGSLGMGGRRDFVTQVNVYNSTCIDC 262
Query: 150 ------------------FTGTNIVTNNVENPIVIDQLYCPYNK---CNIKVPSQVKTSN 188
T+I ENPI+I YC N+ CN + + +
Sbjct: 263 QNGVRVKTWAGGKGFVEDINFTDIYLEKAENPIIITTHYCDKNEMGYCNNNYETSLDIAG 322
Query: 189 VRFNNIRGTSANK------------IPCQNIGIGNIN 213
V F NI G+ ++K PC ++ + NIN
Sbjct: 323 VHFKNIHGSGSDKGKPIINLNCSTESPCSDVTLTNIN 359
>gi|157165830|gb|ABV25004.1| polygalacturonase 7 [Oncidium Gower Ramsey]
Length = 393
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 107/261 (40%), Gaps = 53/261 (20%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP------------PGKYLSI 48
+FNV DFGA DG+ DD+KAFE AW AC + S V +P G Y
Sbjct: 88 MFNVLDFGAKGDGVTDDTKAFEDAWMSACQVEA--STVQIPSDYTFLIGPISFSGPYCQP 145
Query: 49 RFNFLNDSTITGIKSVDSRYFHINILGCYNL-KLNDLKITAHA----------------D 91
F D TI + +S+ + +L KL + I + D
Sbjct: 146 NIIFQLDGTI--VAPTNSKIWSSGLLWWIEFTKLKGITIQGNGTIEGRGSVWWSQPEPND 203
Query: 92 SPNTE--GIHIGSSNGSEI----SHSVIATG--DDCVS--LGHGISVGSLGKGINDEEVV 141
P +E G + S + + S++V TG CVS +++ G+ +
Sbjct: 204 EPISEELGKKMPSIKPTALRFYGSYNVTVTGITKACVSNITVQDVNMYGTMTGVRIKTWQ 263
Query: 142 GLTVRNCTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK 201
G + + +NI + V+ PIVIDQ YC + C + + V S++ + +I+GT K
Sbjct: 264 GGSGSVQSIRFSNIRVSEVQTPIVIDQFYCDRSSCKNQT-AAVALSSIAYESIKGTYTVK 322
Query: 202 ---------IPCQNIGIGNIN 213
PC +I + I
Sbjct: 323 PVHLACSDGTPCSDISLTEIE 343
>gi|34481837|emb|CAD44275.1| putative polygalacturonase [Carica papaya]
Length = 199
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +KS +++ HI C N+ ++L I A A SPNT+G+H+ ++ +IS ++I TGD
Sbjct: 116 VNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGD 175
Query: 118 DCVSLGHG 125
DC+S+ G
Sbjct: 176 DCISIVSG 183
>gi|124359341|gb|ABN05818.1| Virulence factor, pectin lyase fold [Medicago truncatula]
Length = 83
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 18/90 (20%)
Query: 158 NNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNI 207
NN NP++IDQ YCP+N+C+ K S++K S V F NI G A N +P + +
Sbjct: 2 NNFSNPVIIDQEYCPWNQCS-KFSSKIKISKVTFKNIMGIFATQNCVVLIRSNGVPYEEV 60
Query: 208 GIGNINWVYNGVNVKVEGPETTSLCSNVKP 237
+ NI+ +NGV V + C+NVKP
Sbjct: 61 VLSNIDLTFNGVTVN-------ATCANVKP 83
>gi|384499813|gb|EIE90304.1| hypothetical protein RO3G_15015 [Rhizopus delemar RA 99-880]
Length = 382
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 94/226 (41%), Gaps = 62/226 (27%)
Query: 70 HINILGCYNLKLNDLKI----TAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL--- 122
HI + N+ L + + T+ + NT+ + + SS+G +SV+ GDDC ++
Sbjct: 157 HIGVTSSSNVVLQSITLNTASTSSKAAKNTDALDVSSSSGIIFKNSVLTVGDDCTAINGG 216
Query: 123 -------------GHGISVGSLGKGINDE-----EVVGLTVRNC-------TFTG----- 152
GHG SVGSLGK E V+ T NC T+ G
Sbjct: 217 VSNITLSNIVCNGGHGFSVGSLGKNGKSETVKTVRVLDSTCNNCQNGVRIKTWPGGEGSV 276
Query: 153 -----TNIVTNNVENPIVIDQLYCPYNK---CNIKVPSQVKTSNVRFNNIRG---TSANK 201
NIV NV+NP+++ YC N+ CN S + S V F NI G T+ N
Sbjct: 277 TDVKYQNIVLKNVDNPLLVTTHYCDSNQMTYCNKNDDSSLSISGVTFKNISGSVSTAGNP 336
Query: 202 I---------PCQNIGIGNINW-----VYNGVNVKVEGPETTSLCS 233
I PC++ + +++ + V V + G S CS
Sbjct: 337 IININCSTDTPCKSFSLSSVSITKASKTKSNVCVNLSGSSKISYCS 382
>gi|163637657|gb|ABY27563.1| polygalacturonase [Mangifera indica]
Length = 75
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 40/72 (55%), Gaps = 23/72 (31%)
Query: 123 GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNN 159
GHGIS+GSLGK N++ V G+TVRNCT T T +I+ NN
Sbjct: 3 GHGISIGSLGKYQNEQPVEGITVRNCTLTNTMNGVRVKTWPASPRGAASNLRFQDIIMNN 62
Query: 160 VENPIVIDQLYC 171
V NPI+IDQ YC
Sbjct: 63 VSNPIIIDQNYC 74
>gi|34481843|emb|CAD44521.1| putative polygalacturonase [Solanum lycopersicum]
Length = 200
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +KS +++ HI C N+ ++L I A A SPNT+G+H+ ++ +IS ++I TGD
Sbjct: 117 VNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGD 176
Query: 118 DCVSLGHG 125
DC+S+ G
Sbjct: 177 DCISIVSG 184
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,080,272,416
Number of Sequences: 23463169
Number of extensions: 170935626
Number of successful extensions: 377462
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 1279
Number of HSP's that attempted gapping in prelim test: 370747
Number of HSP's gapped (non-prelim): 4396
length of query: 249
length of database: 8,064,228,071
effective HSP length: 139
effective length of query: 110
effective length of database: 9,097,814,876
effective search space: 1000759636360
effective search space used: 1000759636360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)