BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042417
(249 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6H9K0|PGLR2_PLAAC Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2
PE=1 SV=1
Length = 377
Score = 191 bits (484), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 103/250 (41%), Positives = 146/250 (58%), Gaps = 54/250 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++RF+FL + + I S++S+ FHIN+L C ++ + +TA S NT+GIH+G S G
Sbjct: 129 MNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKG 188
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I+++ IATGDDC+S+ GHGIS+GSLG+ N++EV G+TV+ CT
Sbjct: 189 VTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCT 248
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
F+GT ++ NNV+NP+++DQ YCPY +C+ + PS++K
Sbjct: 249 FSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQAPSRIKL 308
Query: 187 SNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
SN+ FNNIRGTS K+ PC N+ IG IN Y G G TS CSNVK
Sbjct: 309 SNINFNNIRGTSTGKVAVVIACSHGMPCSNMKIGEINLSYRGA-----GGPATSTCSNVK 363
Query: 237 PTLFGKQIPA 246
PT GKQ+PA
Sbjct: 364 PTFSGKQVPA 373
Score = 39.3 bits (90), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKY 45
VFNV D+GA G D S+A AW+ AC G S VL+P G Y
Sbjct: 9 VFNVNDYGA--KGAGDISQAVMKAWKAACASQG-PSTVLIPKGNY 50
>sp|Q05967|PGLR_TOBAC Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1
Length = 396
Score = 181 bits (458), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 142/250 (56%), Gaps = 54/250 (21%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
+ FN L +STI I ++DS+ FH+N+ C NL ++A A+SPNT+GIH+ S+
Sbjct: 144 LSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSRSSSVN 203
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFT 151
I+ S +TGDDC+S+ GHGISVGSLG +++ VVG+ VRNCTFT
Sbjct: 204 ITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVRNCTFT 263
Query: 152 GT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T +I+ NV NP+VIDQ+YCP+NKCN +PSQVK S
Sbjct: 264 NTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQVKISK 323
Query: 189 VRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238
V F NI+GTS + +PC+ I +G+I+ Y+G EGP +S C N+KP+
Sbjct: 324 VSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSG----KEGPAKSS-CENIKPS 378
Query: 239 LFGKQIPATC 248
L GKQ P C
Sbjct: 379 LKGKQNPPVC 388
>sp|P24548|PGLR_OENOR Exopolygalacturonase (Fragment) OS=Oenothera organensis PE=2 SV=1
Length = 362
Score = 178 bits (452), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/252 (40%), Positives = 141/252 (55%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+++R + +S + + ++DS+ FH+N++GC NL KI+A S NT+GIHIG S+G
Sbjct: 108 MNLRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHIGRSDG 167
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
I ++ I TGDDC+SL GHGISVGSLG+ N+E VVG+ V+NCT
Sbjct: 168 VNIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIYVKNCT 227
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
TG+ +I N+V PI+IDQ YCPYN+C +VPS VK
Sbjct: 228 ITGSQNGVRIKTWPKSEPGEASEMHFQDITMNSVGTPILIDQGYCPYNQCTAEVPSSVKL 287
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S + F NI+GTS K PC + + +I+ Y+G +G TS+C N+K
Sbjct: 288 SKISFKNIKGTSTTKEAVKLVCSKSFPCNGVELADIDLTYSG-----KGGPATSVCENIK 342
Query: 237 PTLFGKQIPATC 248
PT+ GKQIPA C
Sbjct: 343 PTIKGKQIPAIC 354
>sp|P49063|PGLR2_ARATH Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana
GN=At3g07850 PE=1 SV=2
Length = 444
Score = 175 bits (443), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 137/252 (54%), Gaps = 54/252 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
++IRF L +S I I S +S+ FH+NIL C N+ L+D+ I A +S NT+GIHIG SNG
Sbjct: 190 INIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNG 249
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+ + I TGDDCVS+ GHGIS+GSLG+ N++ V G+TVR C
Sbjct: 250 VNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCL 309
Query: 150 FTGT-----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T +I +NV P++IDQ YCPY C VPSQVK
Sbjct: 310 IKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKL 369
Query: 187 SNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
S+V I+GTSA K +PC NI + +IN V+NG EGP S CSN+K
Sbjct: 370 SDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNG----KEGP-AVSACSNIK 424
Query: 237 PTLFGKQIPATC 248
P L GK +PA C
Sbjct: 425 PILSGKLVPAAC 436
>sp|Q39786|PGLR_GOSHI Polygalacturonase OS=Gossypium hirsutum GN=G9 PE=2 SV=1
Length = 407
Score = 174 bits (441), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 151/298 (50%), Gaps = 66/298 (22%)
Query: 2 FNVKDFGAVADGIKDD--SKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTIT 59
++V++F GI D S A+E + C +S + V +IRF+FL ++ I
Sbjct: 113 YSVENFKMFGGGIFDGQGSIAYE---KNTCENREFRSKLPV------NIRFDFLTNALIQ 163
Query: 60 GIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDC 119
I S DS+ FHIN+ C N+ L LKI A +SPNT+GIH+G S G I S I TGDDC
Sbjct: 164 DITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDC 223
Query: 120 VSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---------- 153
+S+ GHGIS+GSLGK N+E V G+ + NCT T T
Sbjct: 224 ISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWP 283
Query: 154 -------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA- 199
+I NNV +PI+IDQ YCP+NKC S+VK SN+ F NIRGTSA
Sbjct: 284 GEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSAL 343
Query: 200 ---------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
PCQN+ + +I+ +NG TS C NVKP GK P C
Sbjct: 344 PEAIKFICSGSSPCQNVELADIDIKHNGAE------PATSQCLNVKPITSGKLNPIPC 395
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
V FGA ADG D SK F AW+EAC S V++P G YL + N
Sbjct: 32 VAKFGAKADGKTDLSKPFLDAWKEACA-SVTPSTVVIPKGTYLLSKVNL 79
>sp|Q39766|PGLR_GOSBA Polygalacturonase OS=Gossypium barbadense GN=G9 PE=2 SV=1
Length = 407
Score = 174 bits (441), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/298 (38%), Positives = 151/298 (50%), Gaps = 66/298 (22%)
Query: 2 FNVKDFGAVADGIKDD--SKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTIT 59
++V++F GI D S A+E + C +S + V +IRF+F+ ++ I
Sbjct: 113 YSVENFKMFGGGIFDGQGSIAYE---KNTCENREFRSKLPV------NIRFDFVTNALIQ 163
Query: 60 GIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDC 119
I S DS+ FHIN+ C N+ L LKI A +SPNT+GIH+G S G I S I TGDDC
Sbjct: 164 DITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGVNIIASDIKTGDDC 223
Query: 120 VSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---------- 153
+S+ GHGIS+GSLGK N+E V G+ + NCT T T
Sbjct: 224 ISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTITNTSNGARIKTWP 283
Query: 154 -------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA- 199
+I NNV +PI+IDQ YCP+NKC S+VK SN+ F NIRGTSA
Sbjct: 284 GEHGGAVSEIHFEDITMNNVSSPILIDQQYCPWNKCKKNEESKVKLSNISFKNIRGTSAL 343
Query: 200 ---------NKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTLFGKQIPATC 248
PCQN+ + +I+ +NG TS C NVKP GK P C
Sbjct: 344 PEAIKFICSGSSPCQNVELADIDIQHNGAE------PATSQCLNVKPITIGKLNPIPC 395
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
V FGA ADG D SK F AW+EAC S V++P G YL + N
Sbjct: 32 VAKFGAKADGKTDLSKPFLDAWKEACA-SVTPSTVVIPKGTYLLSKVNL 79
>sp|P35337|PGLR_BRANA Polygalacturonase OS=Brassica napus PE=2 SV=1
Length = 397
Score = 173 bits (438), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/254 (39%), Positives = 144/254 (56%), Gaps = 55/254 (21%)
Query: 46 LSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNG 105
+S+RF+F++++ I + S+D++ FH N++ N+ +++KI A A+SPNT+GIH+G G
Sbjct: 139 ISVRFDFVDNAEIKDVTSLDAKNFHFNVISGKNMTFDNIKIIAPAESPNTDGIHLGRCEG 198
Query: 106 SEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCT 149
+I ++ IATGDDC+S+ GHGISVGSLG+ +++V +TV+NCT
Sbjct: 199 VKILNTKIATGDDCISVGDGMKNLLIEKVVCGPGHGISVGSLGRYGWEQDVTDITVKNCT 258
Query: 150 FTGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVK 185
GT +I+ N V NPI+IDQ YCP+N+CN PS +K
Sbjct: 259 LEGTSNGLRIKTWPSAACTTTAAGIHFEDIILNKVSNPILIDQEYCPWNQCNKNKPSTIK 318
Query: 186 TSNVRFNNIRGTSANK----------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
++ F NIRGTS NK PC+N+ IG+IN Y G +GP T C+NV
Sbjct: 319 LVDITFRNIRGTSENKDAVKLLCSKGHPCENVEIGDINIEYTG----PDGPPTFE-CTNV 373
Query: 236 KPTLFGKQIPATCV 249
P L G Q P CV
Sbjct: 374 TPKLVGAQNPKACV 387
>sp|Q40312|PGLR_MEDSA Polygalacturonase OS=Medicago sativa PE=2 SV=1
Length = 421
Score = 164 bits (416), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/264 (36%), Positives = 141/264 (53%), Gaps = 61/264 (23%)
Query: 28 ACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT 87
A W G S V +++ FNF+N+S + G+ S DS+ FH+ + GC N+ + IT
Sbjct: 134 ASAWSGKNSNSKV----FMNFGFNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTIT 189
Query: 88 AHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSL 131
A DSPNT+GIH+G S +I ++ I TGDDCVS+ GHG+SVGSL
Sbjct: 190 APGDSPNTDGIHMGKSTDVKILNTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSL 249
Query: 132 GKGINDEEVVGLTVRNCTFTGT------------------------NIVTNNVENPIVID 167
GK +E V G+TV+NCT T T +I NV+NP++ID
Sbjct: 250 GKFTTEENVEGITVKNCTLTATDNGVRIKTWPDAPGTITVSDIHFEDITMTNVKNPVIID 309
Query: 168 QLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS----------ANKIPCQNIGIGNINWVYN 217
Q Y P+N+C+ K PS++K S + F N++GTS ++ +PC + + N++ +N
Sbjct: 310 QEYYPWNQCSKKNPSKIKLSKISFKNVKGTSGTAEGVVLICSSAVPCDGVELNNVDLKFN 369
Query: 218 GVNVKVEGPETTSLCSNVKPTLFG 241
G TT+ C+NVKP + G
Sbjct: 370 GA-------PTTAKCTNVKPLVTG 386
>sp|P35338|PGLR2_MAIZE Exopolygalacturonase OS=Zea mays GN=PG9 PE=2 SV=1
Length = 410
Score = 133 bits (335), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C N+ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGVTLLNSKFFHMNMYQCKNMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 283 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ K+PC + ++N Y+G N K T ++C+N K
Sbjct: 343 KDVTFKNITGTSSTPEAISLLCTAKVPCTGATMDDVNVEYSGTNNK-----TMAICTNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSTKG 402
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 90
>sp|P26216|PGLR1_MAIZE Exopolygalacturonase OS=Zea mays GN=PG1 PE=1 SV=1
Length = 410
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 127/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++G+ ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + NPI ID YCP C S+V
Sbjct: 283 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ K+PC + + ++N Y+G N K T ++C+N K
Sbjct: 343 KDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNK-----TMAICTNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSTKG 402
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L + NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGQLNF 90
>sp|P35339|PGLR3_MAIZE Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1
Length = 410
Score = 132 bits (331), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 126/245 (51%), Gaps = 55/245 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
S+ +F+N+ ++GI ++S++FH+N+ C ++ + D+ +TA DSPNT+GIH+G S+G
Sbjct: 163 SLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNVTAPGDSPNTDGIHMGDSSGV 222
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I+++VI GDDC+S+ GHGIS+GSLG+ ++++V + V++CT
Sbjct: 223 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 282
Query: 151 TGT------------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKT 186
T NI + PI+ID YCP C S+V
Sbjct: 283 KKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIIIDMKYCPNKLCTANGASKVTV 342
Query: 187 SNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236
+V F NI GTS+ KIPC + + ++N Y+G N K T ++C N K
Sbjct: 343 KDVTFKNITGTSSTPEAVNLLCTAKIPCTGVTMDDVNIKYSGTNNK-----TMAVCKNAK 397
Query: 237 PTLFG 241
+ G
Sbjct: 398 GSAKG 402
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNF 52
F++ GA +G D +KA + AW AC G K +L+P G +L NF
Sbjct: 41 FDITKLGASGNGKTDSTKAVQEAWASACGGTG-KQTILIPKGDFLVGPLNF 90
>sp|P49062|PGLR1_ARATH Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3
PE=2 SV=1
Length = 422
Score = 122 bits (306), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 136/278 (48%), Gaps = 71/278 (25%)
Query: 22 ETAWR-EACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLK 80
E W+ + C G K +PP S++F + + I GI SV+++ FH+ ++ N+
Sbjct: 151 EAVWKADGC---GKKVQCNLPP---TSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVN 204
Query: 81 LNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH 124
+ ++K+TA A+SPNT+GIH+ +++ I S IATGDDCVS+ GH
Sbjct: 205 IQNIKLTAPAESPNTDGIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGH 264
Query: 125 GISVGSLGKGINDEEVVGLTVRNCTFTGT-----------------------NIVTNNVE 161
G+SVGSLGK N+E+V G+ V NCT T NI+ +V+
Sbjct: 265 GLSVGSLGKYKNEEDVSGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVK 324
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
NPI+IDQ Y SQV S++ F NIRGT+ K +PCQ + + +
Sbjct: 325 NPIIIDQNYGSRGG-----DSQVAISDILFKNIRGTTITKDVVQIMCSKSVPCQGVNVVD 379
Query: 212 INWVYNGVNVKVEGPETTS-------LCSNVKPTLFGK 242
+N Y G K G + +S LC N GK
Sbjct: 380 VNLDYVG---KTGGEKKSSSGGLVGALCDNANVIFGGK 414
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS 47
V+++ FGAV DG + KAF W + C+ + + +LVP G +L+
Sbjct: 51 VYDITKFGAVGDGSTNTFKAFLNTWIQVCD-SPVPATLLVPKGTFLA 96
>sp|P48979|PGLR_PRUPE Polygalacturonase OS=Prunus persica PE=2 SV=1
Length = 393
Score = 119 bits (297), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 131/257 (50%), Gaps = 56/257 (21%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P ++ F+ N+ ++G+ S++S+ FHI I N+++ ++++ +SPNT+GIH+
Sbjct: 144 PSGATTLGFSDSNNIVVSGLASLNSQMFHIVINDFQNVQMQGVRVSRSGNSPNTDGIHVQ 203
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
S+G I +S IATGDDCVS+ GHGIS+GSLGK + V +TV
Sbjct: 204 MSSGVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTV 263
Query: 146 RNCTFTGT------------------NIVTN-----NVENPIVIDQLYCPYNKCNIKVPS 182
+ TF+GT NI+ NVENPIVIDQ YCP NK S
Sbjct: 264 KTVTFSGTQNGLRIKSWGRPSTGFARNILFQHATMVNVENPIVIDQHYCPDNKGCPGQVS 323
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLC 232
V+ S+V + +I GTSA ++ PC+ I + ++ Y K + E++ C
Sbjct: 324 GVQISDVTYEDIHGTSATEVAVKFDCSPKHPCREIKLEDVKLTY-----KNQAAESS--C 376
Query: 233 SNVKPTLFGKQIPATCV 249
S+ T G P +C+
Sbjct: 377 SHADGTTEGVVQPTSCL 393
Score = 38.1 bits (87), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITG 60
+NV GA ADG D +KAF +AW +AC + VP G + FL D +G
Sbjct: 28 YNVASLGAKADGKTDSTKAFLSAWAKACA-SMNPGVIYVPAGTF------FLRDVVFSG 79
>sp|Q02096|PGLR_PERAE Polygalacturonase OS=Persea americana PE=2 SV=1
Length = 462
Score = 115 bits (288), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/267 (33%), Positives = 125/267 (46%), Gaps = 58/267 (21%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
ET W +C + L ++ F + ++ + DS+ H++ C ++
Sbjct: 187 ETWWDSSCK----RKKSLPCKSAPTALTFRSCKNLIVSDLSIKDSQKMHLSFDKCQDVIA 242
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
++L +TA SPNT+GIHI + + +SVI TGDDC+S+ GHG
Sbjct: 243 SNLMVTAPEHSPNTDGIHITGTQRIHVMNSVIGTGDDCISIESGSKMVIATNITCGPGHG 302
Query: 126 ISVGSLGKGINDEEVVGLTV------------RNCTFTG----------TNIVTNNVENP 163
IS+GSLG ++ V G+ V R T+ G NIV +NV NP
Sbjct: 303 ISIGSLGDRNSEAHVSGVLVDGGNLFDTTNGLRIKTWQGGSGSAKNIKFQNIVMHNVTNP 362
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKI----------PCQNIGIGNIN 213
I+IDQ YC + S VK SNV + NIRGTSA+++ PCQ +GNIN
Sbjct: 363 IIIDQYYCDSKDPCPEQESAVKVSNVAYMNIRGTSASEVAVKFDCSKSSPCQGYIVGNIN 422
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLF 240
V NG G ETT CSN+ L
Sbjct: 423 LVGNG------GKETTMSCSNIVQGLL 443
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 5/51 (9%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNF 52
+V DFGA DG DD+KAFE AW++AC+ S ++VP K YL + F
Sbjct: 86 SVDDFGARGDGT-DDTKAFEKAWKDACS---SGSVLIVPENKNYLLKQITF 132
>sp|O22818|PGLR6_ARATH Probable polygalacturonase At2g43860 OS=Arabidopsis thaliana
GN=At2g43860 PE=2 SV=1
Length = 405
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 115/223 (51%), Gaps = 50/223 (22%)
Query: 42 PGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIG 101
P S+ F+ N+ I+G+ S++S+ FHI I N+ ++ +K++A +SPNT+GIH+
Sbjct: 150 PTGAKSLVFSGSNNIKISGLTSINSQKFHIVIDNSNNVNIDGVKVSADENSPNTDGIHVE 209
Query: 102 SSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTV 145
SS+ I++S I TGDDC+S+ GHGIS+GSLG+ ++ V +TV
Sbjct: 210 SSHSVHITNSRIGTGDDCISIGPGSTNVFIQTIRCGPGHGISIGSLGRAEEEQGVDNVTV 269
Query: 146 RNCTFTGTN-----------------------IVTNNVENPIVIDQLYCPYNKCNIKVPS 182
N F GTN I V+NPI+IDQ YC + C K S
Sbjct: 270 SNVDFMGTNNGVRIKTWGKDSNSFARNIVFQHINMKMVKNPIIIDQHYCLHKPCP-KQES 328
Query: 183 QVKTSNVRFNNIRGTSANKI----------PCQNIGIGNINWV 215
VK SNVR+ +I GTS ++ PC I + ++N V
Sbjct: 329 GVKVSNVRYEDIHGTSNTEVAVLLDCSKEKPCTGIVMDDVNLV 371
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46
NV +GA DG KD +KAF AW AC + ++VP G++L
Sbjct: 33 LNVLSYGAKPDGSKDSTKAFLAAWDVACA-SANPTTIIVPKGRFL 76
>sp|P48978|PGLR_MALDO Polygalacturonase OS=Malus domestica PE=2 SV=1
Length = 460
Score = 108 bits (271), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 126/268 (47%), Gaps = 67/268 (25%)
Query: 25 WREACNWDGIKSAVLVPPGKYL--SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLN 82
W+ +C K P G Y ++ FN N+ + + D++ H+ C N++ +
Sbjct: 203 WKNSC-----KIKPQPPCGTYAPTAVTFNRCNNLVVKNLNIQDAQQIHVIFQNCINVQAS 257
Query: 83 DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGI 126
L +TA DSPNT+GIH+ ++ IS SVI TGDDC+S+ GHGI
Sbjct: 258 CLTVTAPEDSPNTDGIHVTNTQNITISSSVIGTGDDCISIVSGSQRVQATDITCGPGHGI 317
Query: 127 SVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPI 164
S+GSLG+ +++ V G+ V +GT N+ N+V NPI
Sbjct: 318 SIGSLGEDGSEDHVSGVFVNGAKLSGTSNGLRIKTWKGGSGSATNIVFQNVQMNDVTNPI 377
Query: 165 VIDQLYCPYNKCNIKVP-SQVKTSNVRFNNIRGTSAN----------KIPCQNIGIGNIN 213
+IDQ YC + + K S V+ NV + NIRGTSA+ +PCQ I + ++
Sbjct: 378 IIDQNYCDHKTKDCKQQKSAVQVKNVLYQNIRGTSASGDAITLNCSQSVPCQGIVLQSVQ 437
Query: 214 WVYNGVNVKVEGPETTSLCSNVKPTLFG 241
+ NG + C+NV+P G
Sbjct: 438 -LQNG----------RAECNNVQPAYKG 454
Score = 38.1 bits (87), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
+V DFGA +G DD++AF AW+ AC+ G + VLV P K +R
Sbjct: 99 ISVDDFGAKGNG-ADDTQAFVKAWKAACSSSG--AMVLVVPQKNYLVR 143
>sp|Q94AJ5|PGLR5_ARATH Probable polygalacturonase At1g80170 OS=Arabidopsis thaliana
GN=At1g80170 PE=1 SV=1
Length = 444
Score = 108 bits (270), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 106/219 (48%), Gaps = 48/219 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++ F+ + + + +DS+ HI + C + ++ LK+ A A SPNT+GIHI
Sbjct: 175 GAPTALTFHKCKNMRVENLNVIDSQQMHIALTSCRRVTISGLKVIAPATSPNTDGIHISV 234
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S G I ++ ++TGDDC+S+ GHGIS+GSLGK + EEV +TV
Sbjct: 235 SRGIVIDNTTVSTGDDCISIVKNSTQISISNIICGPGHGISIGSLGKSKSWEEVRDITVD 294
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
+ T NI NNV NPI+IDQ YC K S +
Sbjct: 295 TAIISDTANGVRIKTWQGGSGLVSKIIFRNIKMNNVSNPIIIDQYYCDSRKPCANQTSAI 354
Query: 185 KTSNVRFNNIRGTSANK----------IPCQNIGIGNIN 213
N+ F ++RGTSA+K PC+NI + +I+
Sbjct: 355 SIENISFVHVRGTSASKEAIKISCSDSSPCRNILLQDID 393
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVP 41
+ +V +FGA +G+ DD+KAF AW+ AC+ +K+ +LVP
Sbjct: 52 LLHVGNFGAKGNGVTDDTKAFADAWKTACS-SKVKTRILVP 91
>sp|O23147|ADPG1_ARATH Polygalacturonase ADPG1 OS=Arabidopsis thaliana GN=ADPG1 PE=2 SV=1
Length = 431
Score = 103 bits (258), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 123/263 (46%), Gaps = 62/263 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKL 81
+T W+ +C D K P L +N N + ++ +++ I+I C +++
Sbjct: 173 KTWWQNSCKIDKSKPCTKAPTALTL---YNLKN-LNVKNLRVKNAQQIQISIEKCNKVEV 228
Query: 82 NDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHG 125
++++ITA DSPNT+GIHI ++ +S+S I TGDDC+S+ GHG
Sbjct: 229 SNVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQIFDLTCGPGHG 288
Query: 126 ISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENP 163
IS+GSLG + V G+ V F+ + NI NV+NP
Sbjct: 289 ISIGSLGDDNSKAYVSGINVDGAKFSESDNGVRIKTYQGGSGTAKNIKFQNIRMENVKNP 348
Query: 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA----------NKIPCQNIGIGNIN 213
I+IDQ YC +KC + S V+ NV + NI GTSA K PCQ I +
Sbjct: 349 IIIDQDYCDKDKCEDQ-ESAVQVKNVVYKNISGTSATDVAITLNCSEKYPCQGIVL---- 403
Query: 214 WVYNGVNVKVEGPETTSLCSNVK 236
NVK++G + +NVK
Sbjct: 404 -----ENVKIKGGTASCKNANVK 421
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 4 VKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YL--SIRF 50
V +FGA DG DD++AF+ AW++AC+ +G+ + LVP GK YL S RF
Sbjct: 70 VSNFGAKGDGKTDDTQAFKKAWKKACSTNGV-TTFLVPKGKTYLLKSTRF 118
>sp|P35336|PGLR_ACTDE Polygalacturonase OS=Actinidia deliciosa PE=2 SV=1
Length = 467
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 114/237 (48%), Gaps = 56/237 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +K +++ H++ C N++ ++L +TA +SPNT+GIH+ + IS VI TGD
Sbjct: 224 VKNLKIENAQQIHVSFDNCVNVQASNLMVTAPENSPNTDGIHVTGTQNIHISSCVIGTGD 283
Query: 118 DCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT-------- 153
DC+S+ GHGIS+GSLG G ++ V + V GT
Sbjct: 284 DCISIVNGSRKVRVNDITCGPGHGISIGSLGYGNSEAHVSDVVVNGAKLCGTTNGVRIKT 343
Query: 154 --------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
N+ +NVENPI+IDQ YC +K + S V+ NV + NI+GT A
Sbjct: 344 WQGGSGSASNIKFQNVEMHNVENPIIIDQNYCDQDKPCQEQSSAVQVKNVVYQNIKGTCA 403
Query: 200 N----------KIPCQNIGIGNINWVYNGVNVKVE-GPETTSLCSNVKPTLFGKQIP 245
+ + PCQ I V V++++E G +LC+NV+ + G P
Sbjct: 404 SNVAITFDCSKRFPCQGI-------VLEDVDLEIEGGAAAKALCNNVELSETGVVSP 453
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSIR 49
NV DFGA DG +DD+KAFE AW+ AC+ SAVL+ P K +R
Sbjct: 91 NVDDFGAKGDG-RDDTKAFEKAWKAACS--STSSAVLLVPKKNYLVR 134
>sp|Q8RY29|ADPG2_ARATH Polygalacturonase ADPG2 OS=Arabidopsis thaliana GN=ADPG2 PE=2 SV=2
Length = 433
Score = 102 bits (255), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 117/242 (48%), Gaps = 57/242 (23%)
Query: 22 ETAWREACNWDGIKSAVLVPPGKYLSIRFNFLNDST--ITGIKSVDSRYFHINILGCYNL 79
ET W+ +C + K P F N + + +K +++ I+I C N+
Sbjct: 173 ETWWQNSCKRNKAKPCTKAPTA------LTFYNSKSLIVKNLKVRNAQQIQISIEKCSNV 226
Query: 80 KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------G 123
+++++ +TA ADSPNT+GIHI ++ +S S+I TGDDC+S+ G
Sbjct: 227 QVSNVVVTAPADSPNTDGIHITNTQNIRVSESIIGTGDDCISIESGSQNVQINDITCGPG 286
Query: 124 HGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVE 161
HGIS+GSLG + V G+TV +GT NI +NV+
Sbjct: 287 HGISIGSLGDDNSKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMDNVK 346
Query: 162 NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGN 211
NPI+IDQ YC +KC + S V+ NV + +I GTSA++ PCQ I +
Sbjct: 347 NPIIIDQDYCDKSKCTTE-KSAVQVKNVVYRDISGTSASENAITFNCSKNYPCQGIVLDR 405
Query: 212 IN 213
+N
Sbjct: 406 VN 407
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 3 NVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+V DFGA DG DD++AF AW++AC+ +G + +LVP G
Sbjct: 69 SVSDFGAKGDGKTDDTQAFVNAWKKACSSNGAVN-LLVPKG 108
>sp|Q9SFB7|QRT2_ARATH Polygalacturonase QRT2 OS=Arabidopsis thaliana GN=QRT2 PE=1 SV=2
Length = 439
Score = 100 bits (250), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 53/251 (21%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G ++ F N+ ++ I+ +++ H+ C N+K +L +T+ ADSPNT+GIH+
Sbjct: 191 GAPTAVTFVECNNLRVSNIRLENAQQMHLTFQDCKNVKALNLMVTSPADSPNTDGIHVSG 250
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
+ I S++ TGDDC+S+ GHGIS+GSLG+ ++ V + V
Sbjct: 251 TQNILIQDSIVRTGDDCISIVSGSENVRATGITCGPGHGISIGSLGEDNSEAYVSNVVVN 310
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
T GT +I+ NV NPI+I+Q YC + + S V
Sbjct: 311 KATLIGTTNGVRIKTWQGGHGMAKNIIFQDIIMKNVTNPIIINQDYCDRVEACPEQKSAV 370
Query: 185 KTSNVRFNNIRGTSAN----------KIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSN 234
+ SNV + NI+GTS+ IPC+ I + N+ V + + + + CSN
Sbjct: 371 QVSNVLYKNIQGTSSRPIAVKFVCSKNIPCRGISMQNVKLVD-----QTQQDVSKASCSN 425
Query: 235 VKPTLFGKQIP 245
VK G P
Sbjct: 426 VKLDTRGNVSP 436
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGI 34
FNV FGA A+G DDSKAF AW AC+ GI
Sbjct: 71 FNVNTFGAKANG-NDDSKAFMKAWEAACSSTGI 102
>sp|P05117|PGLR_SOLLC Polygalacturonase-2 OS=Solanum lycopersicum GN=PG2 PE=1 SV=1
Length = 457
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 112/226 (49%), Gaps = 54/226 (23%)
Query: 58 ITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGD 117
+ +KS +++ HI C N+ ++L I A A SPNT+G+H+ ++ +IS ++I TGD
Sbjct: 211 VNNLKSKNAQQIHIKFESCTNVVASNLMINASAKSPNTDGVHVSNTQYIQISDTIIGTGD 270
Query: 118 DCVSL----------------GHGISVGSLGKG----------INDEEVVGLT--VRNCT 149
DC+S+ GHGIS+GSLG G +N+ +++G VR T
Sbjct: 271 DCISIVSGSQNVQATNITCGPGHGISIGSLGSGNSEAYVSNVTVNEAKIIGAENGVRIKT 330
Query: 150 FTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
+ G N+ +V+ PI+IDQ YC + I+ S V+ NV + NI+GTSA
Sbjct: 331 WQGGSGQASNIKFLNVEMQDVKYPIIIDQNYCDRVEPCIQQFSAVQVKNVVYENIKGTSA 390
Query: 200 NKI----------PCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
K+ PC+ I + NIN V G + + C NV
Sbjct: 391 TKVAIKFDCSTNFPCEGIIMENINLVGES------GKPSEATCKNV 430
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGK-YLSIRFNF 52
V NV FGA DG D+ AFE AW EAC+ +VP K YL + F
Sbjct: 75 VINVLSFGAKGDGKTYDNIAFEQAWNEACS-SRTPVQFVVPKNKNYLLKQITF 126
>sp|Q9LW07|PGLR3_ARATH Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana
GN=At3g15720 PE=1 SV=1
Length = 456
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 50/211 (23%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+++F N+ ++G+ +DS HI+I C + ++ L+I A SPNT+GI +G+S+
Sbjct: 140 ALKFRSCNNLRLSGLTHLDSPMAHIHISECNYVTISSLRINAPESSPNTDGIDVGASSNV 199
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I +IATGDDC+++ GHGIS+GSLGK V + V+NC F
Sbjct: 200 VIQDCIIATGDDCIAINSGTSNIHISGIDCGPGHGISIGSLGKDGETATVENVCVQNCNF 259
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIK--VPSQVKT 186
GT I +NVENPI+IDQ Y + N K S V+
Sbjct: 260 RGTMNGARIKTWQGGSGYARMITFNGITLDNVENPIIIDQFYNGGDSDNAKDRKSSAVEV 319
Query: 187 SNVRFNNIRGTS----------ANKIPCQNI 207
S V F+N GTS + ++PC I
Sbjct: 320 SKVVFSNFIGTSKSEYGVDFRCSERVPCTEI 350
>sp|Q9FY19|PGLR2_JUNAS Polygalacturonase OS=Juniperus ashei GN=JNA2 PE=1 SV=1
Length = 507
Score = 98.2 bits (243), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 98/218 (44%), Gaps = 48/218 (22%)
Query: 43 GKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS 102
G+ +I+ +F T+ + +S FH+ C +K+ +KI A DSPNT+GI I +
Sbjct: 182 GRPTAIKIDFSKSVTVKELTLTNSPEFHLVFGECDGVKIQGIKIKAPRDSPNTDGIDIFA 241
Query: 103 SNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVR 146
S EI I TGDDCV++ GHG+S+GSLGKG + EV + +
Sbjct: 242 SKRFEIEKCTIGTGDDCVAVGTGSSNITIKDLTCGPGHGMSIGSLGKGNSRSEVSFVHLD 301
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQV 184
F T N+ N ENPI+I+Q YC S V
Sbjct: 302 GAKFIDTQNGLRIKTWQGGSGLASHITYENVEMINAENPILINQFYCTSAAACKNQRSAV 361
Query: 185 KTSNVRFNNIRGTSA----------NKIPCQNIGIGNI 212
K +V F NI GTSA + +PC NI + N+
Sbjct: 362 KIQDVTFKNIHGTSATTAAIQLMCSDSVPCSNIKLSNV 399
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 13/71 (18%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLSI-----------R 49
VFNV+ +GAV DG D + AFE W ACN + + LVP K +
Sbjct: 59 VFNVEHYGAVGDGKHDSTDAFEKTWNAACN--KLSAVFLVPANKKFVVNNLVFYGPCQPH 116
Query: 50 FNFLNDSTITG 60
F+F D TI
Sbjct: 117 FSFKVDGTIAA 127
>sp|P43212|PGLR2_CRYJA Polygalacturonase OS=Cryptomeria japonica PE=1 SV=1
Length = 514
Score = 96.3 bits (238), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 101/215 (46%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+F+F I G+K ++S FH+ C +K+ + ITA DSPNT+GI I +S
Sbjct: 185 AIKFDFSTGLIIQGLKLMNSPEFHLVFGNCEGVKIIGISITAPRDSPNTDGIDIFASKNF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
+ + I TGDDCV++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HLQKNTIGTGDDCVAIGTGSSNIVIEDLICGPGHGISIGSLGRENSRAEVSYVHVNGAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+ +
Sbjct: 305 IDTQNGLRIKTWQGGSGMASHIIYENVEMINSENPILINQFYCTSASACQNQRSAVQIQD 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NIRGTSA + +PC++I + +I+
Sbjct: 365 VTYKNIRGTSATAAAIQLKCSDSMPCKDIKLSDIS 399
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
+FNV+ +GAV DG D ++AF TAW+ AC SA+L+ PG
Sbjct: 58 IFNVEKYGAVGDGKHDCTEAFSTAWQAACK---KPSAMLLVPG 97
>sp|Q949Z1|PGLR4_ARATH Polygalacturonase At1g48100 OS=Arabidopsis thaliana GN=At1g48100
PE=2 SV=1
Length = 475
Score = 92.4 bits (228), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 97/194 (50%), Gaps = 39/194 (20%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
IRF N+ + G++ +S FH+ GC + +N+++I++ SPNT+GIH+G++
Sbjct: 213 IRFFMSNNIEVKGLRIQNSPQFHMKFDGCQGVLINEIQISSPKLSPNTDGIHLGNTRSVG 272
Query: 108 ISHSVIATGDDCVSLG----------------HGISVGSLGKGINDEEVVGLTVRNC--- 148
I +SV++ GDDC+S+G HGIS+GSLG + V +TVRN
Sbjct: 273 IYNSVVSNGDDCISIGTGCSDVDIQGVTCGPSHGISIGSLGVHNSQACVSNITVRNTVIR 332
Query: 149 ---------TFTG----------TNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNV 189
T+ G NI NV N I++DQ YC C + S VK +V
Sbjct: 333 DSDNGLRVKTWQGGTGSVSNLLFENIQMENVLNCIIVDQYYCQSKDCRNET-SAVKVFDV 391
Query: 190 RFNNIRGTSANKIP 203
+ NI+GT + P
Sbjct: 392 EYRNIKGTYDVRSP 405
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPP 42
VF+V FGAV DG DD+ AF+ AW+ AC ++S V++ P
Sbjct: 79 VFDVTSFGAVGDGSCDDTAAFQDAWKAAC---AVESGVVLAP 117
>sp|Q7M1E7|PGLR2_CHAOB Polygalacturonase OS=Chamaecyparis obtusa PE=1 SV=1
Length = 514
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 95/215 (44%), Gaps = 48/215 (22%)
Query: 47 SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGS 106
+I+ ++ T+ + ++S FH+ C +K+ LKI A DSPNT+GI I +S
Sbjct: 185 AIKIDYSKSVTVKELTLMNSPEFHLVFGECEGVKIQGLKIKAPRDSPNTDGIDIFASKRF 244
Query: 107 EISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTF 150
I VI TGDDC+++ GHGIS+GSLG+ + EV + V F
Sbjct: 245 HIEKCVIGTGDDCIAIGTGSSNITIKDLICGPGHGISIGSLGRDNSRAEVSHVHVNRAKF 304
Query: 151 TGT----------------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSN 188
T N+ N ENPI+I+Q YC S V+
Sbjct: 305 IDTQNGLRIKTWQGGSGLASYITYENVEMINSENPILINQFYCTSASACQNQRSAVQIQG 364
Query: 189 VRFNNIRGTSA----------NKIPCQNIGIGNIN 213
V + NI GTSA + +PC I + N++
Sbjct: 365 VTYKNIHGTSATAAAIQLMCSDSVPCTGIQLSNVS 399
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG 43
VFNV+ +GAV DG D ++AF T W AC SAVL+ P
Sbjct: 58 VFNVEQYGAVGDGKHDSTEAFATTWNAACK---KASAVLLVPA 97
>sp|Q0CMU3|PGLR1_ASPTN Probable endopolygalacturonase I OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=pgaI PE=3 SV=1
Length = 368
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 103/249 (41%), Gaps = 50/249 (20%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI-TAH 89
WDG + K+L + L DSTI G+ ++ I++ NL L D+ I +
Sbjct: 120 WDGKGTNGGKTKPKFL--YAHKLEDSTIKGLNIKNTPVQAISVQ-ANNLHLTDITIDNSD 176
Query: 90 ADSP---NTEGIHIGSSNGSEISHSVIATGDDCVSL---------------GHGISVGSL 131
DS NT+G I SNG IS + + DDC+++ GHG+S+GS+
Sbjct: 177 GDSKGGHNTDGFDISESNGVYISGANVKNQDDCIAINSGKNIEFTGGTCSGGHGLSIGSI 236
Query: 132 GKGINDEEVVGLTVRNCTFT----GTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTS 187
G G +D V G+ + + T T G I T E V D Y I V
Sbjct: 237 G-GRDDNTVQGVKITDSTVTNSDNGIRIKTIVDETGSVSDVTYSNIKLSGIHKKGIVIQQ 295
Query: 188 NVRFNNIRGTSANKIPCQNIGIGNI---------------------NWVYNGVNVKVEGP 226
+ + G +N IP +++ + I +W + NVK+ G
Sbjct: 296 DYKNGGPTGKPSNGIPIKDVTVDGITGSVDSKATPVYILCGSGSCSDWTWK--NVKLSGG 353
Query: 227 ETTSLCSNV 235
+++S C N+
Sbjct: 354 KSSSECKNL 362
>sp|Q27UB1|PGXB_ASPNG Exopolygalacturonase B OS=Aspergillus niger GN=pgxB PE=3 SV=1
Length = 438
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 75/192 (39%), Gaps = 56/192 (29%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG-------------- 123
N+ ++ A +D NT+G+ +G ++ I GDDC S
Sbjct: 216 NVYIHAFSTNASSDPANTDGMDSLDVDGVSFTNMRIDVGDDCFSPKPNTTNIFVQNMWCN 275
Query: 124 --HGISVGSLGKGINDEEVV-GLTVRNCTF-------------------------TGTNI 155
HG+S+GS+G+ + +++ + + N T T NI
Sbjct: 276 NTHGVSMGSIGQYAGEMDIIENVYIENVTLLNGQNGARLKAWAGQDVGYGRINNVTYKNI 335
Query: 156 VTNNVENPIVIDQLYCPYNKCN-IKVPSQVKTSNVRFNNIRGTSANK------------- 201
N + PIV+DQ Y N K PS V +N+ F NI G+S+ K
Sbjct: 336 QIQNTDAPIVLDQCYFDINATECAKYPSAVNITNILFENIWGSSSGKDGKIVADLVCSPD 395
Query: 202 IPCQNIGIGNIN 213
C NI + N+N
Sbjct: 396 AVCTNITLSNVN 407
>sp|A2QHG0|PGXB_ASPNC Probable exopolygalacturonase B OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgxB PE=3 SV=1
Length = 438
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 75/192 (39%), Gaps = 56/192 (29%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG-------------- 123
N+ ++ A +D NT+G+ +G ++ I GDDC S
Sbjct: 216 NVYIHAFSTNASSDPANTDGMDSLDVDGVSFTNMRIDVGDDCFSPKPNTTNIFVQNMWCN 275
Query: 124 --HGISVGSLGKGINDEEVV-GLTVRNCTF-------------------------TGTNI 155
HG+S+GS+G+ + +++ + + N T T NI
Sbjct: 276 NTHGVSMGSIGQYAGEMDIIENVYIENVTLLNGQNGARLKAWAGQDVGYGRINNVTYKNI 335
Query: 156 VTNNVENPIVIDQLYCPYNKCN-IKVPSQVKTSNVRFNNIRGTSANK------------- 201
N + PIV+DQ Y N K PS V +N+ F NI G+S+ K
Sbjct: 336 QIQNTDAPIVLDQCYFDINATECAKYPSAVNITNILFENIWGSSSGKDGKIVADLVCSPD 395
Query: 202 IPCQNIGIGNIN 213
C NI + N+N
Sbjct: 396 AVCTNITLSNVN 407
>sp|Q873X6|PGXB_EMENI Probable exopolygalacturonase B OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=pgxB
PE=2 SV=1
Length = 440
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 49/168 (29%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG-------------- 123
N+ +N A A+ NT+G + NG ++++ + GDDC S
Sbjct: 221 NVFINAYSTNASAEPKNTDGFDSLNVNGLSVTNTRVDIGDDCFSPKPNTTNIFVQNLWCN 280
Query: 124 --HGISVGSLGK--GIND--------------------------EEVVGLTVRNCTFTGT 153
HG+S+GS+G+ G+ D E+V + N T+
Sbjct: 281 NTHGVSMGSIGQYPGVLDIIEHAYIENVTLLNGENGARLKAWAGEDVGYGRINNITY--K 338
Query: 154 NIVTNNVENPIVIDQLY--CPYNKCNIKVPSQVKTSNVRFNNIRGTSA 199
NI N + PIV+DQ Y P ++C PSQV +N+ F N+ GTS+
Sbjct: 339 NIHVENTDYPIVLDQCYFNIPADEC-ASYPSQVNVTNIVFENVYGTSS 385
>sp|O93883|PGLR_PENGR Polygalacturonase OS=Penicillium griseoroseum GN=PGG1 PE=3 SV=1
Length = 376
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 101/223 (45%), Gaps = 57/223 (25%)
Query: 61 IKSVDSRYFHINILGCYNLKLNDLKI-TAHADS---PNTEGIHIGSSNGSEISHSVIATG 116
IK+ + F IN G L L+ + + TA DS NT+ +GSSNG I+ ++
Sbjct: 157 IKNSPVQVFSIN--GAKELTLSGITVDTADGDSNGGHNTDAFDVGSSNGVYITSPIVHNQ 214
Query: 117 DDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTF----------- 150
DDC+++ GHGIS+GS+G G +D V G+TV +CT
Sbjct: 215 DDCLAVNSGTNVHFTGAQCTGGHGISIGSVG-GRSDNTVDGVTVESCTIKDSDNGVRIKT 273
Query: 151 ----TGT-------NIVTNNVEN-PIVIDQLYCPYNKCNIKVP-SQVKTSNVRFNNIRGT 197
TGT +I + + IVI+Q Y N P S V +++ +N+ GT
Sbjct: 274 VYGATGTVQGVTYKDITLSGIAKYGIVIEQDY--ENGSPTGTPTSGVPITDLTLDNVHGT 331
Query: 198 SANK-----IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
A+ I C + +W ++GV++ G +T+ C +
Sbjct: 332 VASSGVDTYILCASGACS--DWSWSGVSIT--GGQTSKKCKGI 370
>sp|P47180|PGLR_YEAST Polygalacturonase OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PGU1 PE=1 SV=1
Length = 361
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 23/136 (16%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAH- 89
WDG+ + V P K++ + + T IK+ + F IN C +L ++D+ I
Sbjct: 113 WDGLGDSGKVKP-KFVKLALTGTSKVTGLNIKNAPHQVFSIN--KCSDLTISDITIDIRD 169
Query: 90 ---ADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL---------------GHGISVGSL 131
A NT+G +GSS+ I + DDC+++ GHGISVGS+
Sbjct: 170 GDSAGGHNTDGFDVGSSSNVLIQGCTVYNQDDCIAVNSGSTIKFMNNYCYNGHGISVGSV 229
Query: 132 GKGINDEEVVGLTVRN 147
G G +D V G N
Sbjct: 230 G-GRSDNTVNGFWAEN 244
>sp|A2QK83|XGHA_ASPNC Probable endo-xylogalacturonan hydrolase A OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=xghA PE=3 SV=1
Length = 406
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 58/219 (26%)
Query: 75 GCYNLKLNDLKITAHA--DSP--NTEGIHIGSSNGSEISHSVIATGDDCVSL-------- 122
G N+ ++LK+ A++ D+P NT+G IG S I+ + DDCV+L
Sbjct: 182 GATNVVFSNLKMDANSKSDNPPKNTDGFDIGESTYVTITEVTVVNDDDCVALKPSSNYVT 241
Query: 123 --------GHGISVGSLGKG---------------INDEEVVGL------------TVRN 147
HGISVGSLGK IN + G+ TV N
Sbjct: 242 VDTISCTGSHGISVGSLGKSSDDSVKNIYVTGATMINSTKAAGIKTYPSGGDHGTSTVSN 301
Query: 148 CTFTGTNIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK------ 201
TF T+ +N + I Y + + P K +++ ++ GT+++K
Sbjct: 302 VTF--TDFTVDNSDYAFQIQSCYGEDDDYCEENPGNAKLTDIVVSSFSGTTSDKYDPVVA 359
Query: 202 -IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
I C + G I+ +G +VK ++ LC+N L
Sbjct: 360 NIDCGSDGTCGIS--ISGFDVKAPSGKSEVLCANTPSDL 396
>sp|A1DAX2|PGXB_NEOFI Probable exopolygalacturonase B OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgxB
PE=3 SV=1
Length = 453
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 43/167 (25%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG-------------- 123
N+ ++ A A NT+G + +G ++++ + GDDC+S
Sbjct: 216 NVFIHAYSTNASALPKNTDGFDTLNVDGLTVTNTRVDIGDDCLSPKPNTTNVFVQNLWCN 275
Query: 124 --HGISVGSLGK--GIND-------EEVVGLTVRNCT-----------------FTGTNI 155
HG S+GS+G+ G+ D E V L N T NI
Sbjct: 276 GTHGTSMGSIGQYPGVLDIIENVWIENVTLLNGENGARLKAWAGPNVGYGRINNVTYKNI 335
Query: 156 VTNNVENPIVIDQLYCPYNKCN-IKVPSQVKTSNVRFNNIRGTSANK 201
N +NPIV+DQ Y N PS+V +N+ F NI GTS+ K
Sbjct: 336 HVENTDNPIVLDQCYFNINATQCAAYPSRVNFTNIVFENIYGTSSGK 382
>sp|Q00446|PGLR1_COLLN Endopolygalacturonase 1 OS=Colletotrichum lindemuthianum GN=PG1
PE=3 SV=1
Length = 363
Score = 44.3 bits (103), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 101/229 (44%), Gaps = 53/229 (23%)
Query: 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA-DSP---NTEGIHIGSSNGSEI 108
L DSTI G+ ++++ +I G NL + D+ + A DS NT+ +GSS G I
Sbjct: 134 LKDSTIRGLHTLNTPVQAFSINGAANLGVYDVSVDNSAGDSAGGHNTDAFDVGSSTGVYI 193
Query: 109 SHSVIATGDDCVSL---------------GHGISVGSLG--------------------- 132
S + + DDC+++ GHG+S+GS+G
Sbjct: 194 SGADVKNQDDCLAVNSGTNITFTGGTCSGGHGLSIGSVGGRKDNVVKSVSITNSKIINSD 253
Query: 133 KGINDEEVVGLT--VRNCTFTGTNIVTNNVENPIVIDQLY---CPYNKCNIKVP-SQVKT 186
G+ + V G T V + T++G + +N + IVI+Q Y P K VP S +
Sbjct: 254 NGVRIKTVAGATGPVSDITYSGITL-SNIAKYGIVIEQDYENGSPTGKPTSGVPISGLTL 312
Query: 187 SNVRFNNIRGTSANKIPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNV 235
S + + + I C + NW ++GV+ V G + +S C+ +
Sbjct: 313 SKISGSVSSSATPVYILCASC----TNWKWSGVS--VTGGKKSSKCTGI 355
>sp|Q5ATQ3|PGLR_EMENI Endopolygalacturonase AN8327 OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=AN8327
PE=1 SV=1
Length = 380
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 53/252 (21%)
Query: 31 WDGIKSAVLVPPGKYLSIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA 90
WDG S V K+ + L DSTI + ++ ++I GC L + D+ I A
Sbjct: 127 WDGEGSNGGVTKPKFF--YAHDLTDSTIQNLYIENTPVQAVSINGCDGLTITDMTIDNSA 184
Query: 91 DSP----NTEGIHIGSSNGSEISHSVIATGDDCVSL---------------GHGISVGSL 131
NT+G IG S+ I+ + + DDCV++ GHG+S+GS+
Sbjct: 185 GDDAGGHNTDGFDIGESSNVVITGAKVYNQDDCVAVNSGTSITFSGGTCSGGHGLSIGSV 244
Query: 132 GKGINDEEVVGLTVRNCTFT----GTNIVTNNVEN-------------------PIVIDQ 168
G G +D V +T ++ T + G I + E I+I+Q
Sbjct: 245 G-GRDDNTVDTVTFKDSTVSNSVNGIRIKAKSGETGEIKGVTYSGISLESISDYGILIEQ 303
Query: 169 LYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIPCQNIGI-----GNINWVYNGVNVKV 223
Y + +V S + +++ NI G+ A NI I NW ++ +V+V
Sbjct: 304 NY-DGGDLDGEVTSGIPITDLTIENISGSGAVDSDGYNIVIVCGDDACSNWTWS--DVEV 360
Query: 224 EGPETTSLCSNV 235
G E C NV
Sbjct: 361 TGGEDYGSCENV 372
>sp|Q2TW03|PGXB_ASPOR Probable exopolygalacturonase B OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=pgxB PE=3 SV=2
Length = 435
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 48/193 (24%)
Query: 57 TITGIKSVDSRYFHINILGCYNLKLNDLKITAH-----ADSPNTEGIHIGSSNGSEISHS 111
++ GI ++S + + ++ +D+ I A A N++G + +G ++++
Sbjct: 189 SVEGITQLNSPCWTNFFIQSKDVSFDDVYIHAFSTNKSALPKNSDGFDSLNVDGLTVTNT 248
Query: 112 VIATGDDCVSLG----------------HGISVGSLGK--GIND-------EEVVGLTVR 146
+ GDDC S HG+S+GS+G+ G+ D E V L +
Sbjct: 249 RVDVGDDCFSPKPNTTNIFVQNLLCNNTHGVSMGSIGQYPGVMDIIEHAYIENVTLLNGQ 308
Query: 147 NCT-----------------FTGTNIVTNNVENPIVIDQLYCPYNKCN-IKVPSQVKTSN 188
N T NI N + P+V+DQ Y + PSQV +N
Sbjct: 309 NGARLKAWAGQDVGYGRINNITYKNIRIENTDAPVVLDQCYFDIEAAECAQYPSQVNVTN 368
Query: 189 VRFNNIRGTSANK 201
+ F NI GTS+ K
Sbjct: 369 ILFENISGTSSGK 381
>sp|B8NX60|PGXB_ASPFN Probable exopolygalacturonase B OS=Aspergillus flavus (strain ATCC
200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167)
GN=pgxB PE=3 SV=1
Length = 435
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 48/193 (24%)
Query: 57 TITGIKSVDSRYFHINILGCYNLKLNDLKITAH-----ADSPNTEGIHIGSSNGSEISHS 111
++ GI ++S + + ++ +D+ I A A N++G + +G ++++
Sbjct: 189 SVEGITQLNSPCWTNFFIQSKDVSFDDVYIHAFSTNKSALPKNSDGFDSLNVDGLTVTNT 248
Query: 112 VIATGDDCVSLG----------------HGISVGSLGK--GIND-------EEVVGLTVR 146
+ GDDC S HG+S+GS+G+ G+ D E V L +
Sbjct: 249 RVDVGDDCFSPKPNTTNIFVQNLLCNNTHGVSMGSIGQYPGVMDIIEHAYIENVTLLNGQ 308
Query: 147 NCT-----------------FTGTNIVTNNVENPIVIDQLYCPYNKCN-IKVPSQVKTSN 188
N T NI N + P+V+DQ Y + PSQV +N
Sbjct: 309 NGARLKAWAGQDVGYGRINNITYKNIRIENTDAPVVLDQCYFDIEAAECAQYPSQVNVTN 368
Query: 189 VRFNNIRGTSANK 201
+ F NI GTS+ K
Sbjct: 369 ILFENISGTSSGK 381
>sp|P18192|PGLR1_PECCC Endo-polygalacturonase OS=Pectobacterium carotovorum subsp.
carotovorum GN=peh PE=3 SV=1
Length = 402
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 48/174 (27%)
Query: 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSE 107
I+ N + T+ + ++S FH+ I + + NT+GI SS
Sbjct: 180 IQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNIT 239
Query: 108 ISHSVIATGDDCVSL---------------------GHGISVGSLGKGINDEEVVGLTVR 146
I+HS I+TGDD V++ GHG+S+GS G V +TV
Sbjct: 240 IAHSNISTGDDNVAIKAYKGRSETRNISILHNEFGTGHGMSIGSETMG-----VYNVTVD 294
Query: 147 NCTFTGT----------------------NIVTNNVENPIVIDQLYCPYNKCNI 178
+ TGT N+V NV PIVID +Y N+
Sbjct: 295 DLIMTGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNV 348
>sp|Q9UUZ2|XGHA_ASPTU Endo-xylogalacturonan hydrolase A OS=Aspergillus tubingensis
GN=xghA PE=2 SV=1
Length = 406
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 92/218 (42%), Gaps = 56/218 (25%)
Query: 75 GCYNLKLNDLKITAHA--DSP--NTEGIHIGSSNGSEISHSVIATGDDCVSL-------- 122
G N+ ++LK+ A++ D+P NT+G IG S I+ + DDCV+
Sbjct: 182 GATNVVFSNLKMDANSKSDNPPKNTDGFDIGESTYVTITEVTVVNDDDCVAFKPSSNYVT 241
Query: 123 --------GHGISVGSLGKGINDE----EVVGLTVRNCTFT------------GTNIVTN 158
HGISVGSLGK +D V G T+ N T GT+ V+N
Sbjct: 242 VDTISCTGSHGISVGSLGKSSDDSVKNIYVTGATMINSTKAAGIKTYPSGGDHGTSTVSN 301
Query: 159 NVENPIVID------QLYCPYNK----CNIKVPSQVKTSNVRFNNIRGTSANK------- 201
N +D Q+ Y + C + P K +++ ++ GT+++K
Sbjct: 302 VTFNDFTVDNSDYAFQIQSCYGEDDDYCE-ENPGNAKLTDIVVSSFSGTTSDKYDPVVAN 360
Query: 202 IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPTL 239
+ C G I+ +G +VK ++ LC+N L
Sbjct: 361 LDCGADGTCGIS--ISGFDVKAPSGKSEVLCANTPSDL 396
>sp|Q4WBK6|PGXB_ASPFU Probable exopolygalacturonase B OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgxB
PE=3 SV=2
Length = 453
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 43/167 (25%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG-------------- 123
N+ ++ A A NT+G + +G ++++ + GDDC+S
Sbjct: 216 NVFIHAYSTNASALPKNTDGFDTLNVDGLTVTNTRVDIGDDCLSPKPNTTNVFVKNLWCN 275
Query: 124 --HGISVGSLGK--GIND-------EEVVGLTVRNCT-----------------FTGTNI 155
HG S+GS+G+ G+ D E V L N T NI
Sbjct: 276 GTHGASMGSIGQYPGVLDIIENVWIENVTLLNGENGARLKAWAGPDVGYGRINNVTYKNI 335
Query: 156 VTNNVENPIVIDQLYCPYNKCN-IKVPSQVKTSNVRFNNIRGTSANK 201
N +NPIV+DQ Y N PS+V +N+ F +I GTS+ K
Sbjct: 336 HVENTDNPIVLDQCYFNINATQCAAYPSRVNFTNIVFEDIYGTSSGK 382
>sp|Q0C7H7|PGXB_ASPTN Probable exopolygalacturonase B OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=pgxB PE=3 SV=1
Length = 435
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 43/167 (25%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG-------------- 123
N+ + A A NT+G + G ++++ + GDDC S
Sbjct: 215 NVYIEAFSTNASALPKNTDGFDSYNVKGLSVTNTRVNVGDDCFSPKPNTTDIFVQNLWCN 274
Query: 124 --HGISVGSLGK--GIND-------EEVVGLTVRNCT-----------------FTGTNI 155
HG+S+GS+G+ G+ D E V L +N T NI
Sbjct: 275 GTHGVSMGSIGQYPGVMDIIEHAYIENVTLLNGQNGARLKAWAGENVGYGRINNITYKNI 334
Query: 156 VTNNVENPIVIDQLYCPYNKCN-IKVPSQVKTSNVRFNNIRGTSANK 201
N + P+V+DQ Y + + PS V +N+ F N+ GTS+ K
Sbjct: 335 RIENTDKPVVLDQCYFNVDTATCAEYPSSVNITNITFENVYGTSSGK 381
>sp|B0YAA4|PGXB_ASPFC Probable exopolygalacturonase B OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=pgxB PE=3 SV=2
Length = 453
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 43/167 (25%)
Query: 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSLG-------------- 123
N+ ++ A A NT+G + +G ++++ + GDDC+S
Sbjct: 216 NVFIHAYSTNASALPKNTDGFDTLNVDGLTVTNTRVDIGDDCLSPKPNTTNVFVKNLWCN 275
Query: 124 --HGISVGSLGK--GIND-------EEVVGLTVRNCT-----------------FTGTNI 155
HG S+GS+G+ G+ D E V L N T NI
Sbjct: 276 GTHGASMGSIGQYPGVLDIIENVWIENVTLLNGENGARLKAWAGPDVGYGRINNVTYKNI 335
Query: 156 VTNNVENPIVIDQLYCPYNKCN-IKVPSQVKTSNVRFNNIRGTSANK 201
N +NPIV+DQ Y N PS+V +N+ F +I GTS+ K
Sbjct: 336 HVENTDNPIVLDQCYFNINATQCAAYPSRVNFTNIVFEDIYGTSSGK 382
>sp|A1CVV8|PGLRA_NEOFI Probable endopolygalacturonase A OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=pgaA
PE=3 SV=1
Length = 368
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 72/239 (30%)
Query: 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKI-TAHADS---PNTEGIHIGSSNGSEI 108
L DSTITG+ ++ I++ NL L D+ I + D NT+G I S G I
Sbjct: 140 LEDSTITGLSIKNTPVQAISVQ-ATNLYLIDITIDNSDGDDNGGHNTDGFDISESTGVYI 198
Query: 109 SHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
+ + DDC+++ GHG+S+GS+G G +D V +T+ + T T
Sbjct: 199 RGATVKNQDDCIAINSGENIEFSGGTCSGGHGLSIGSVG-GRDDNTVKNVTITDSTVT-- 255
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNI----------------RGT 197
+ N + I +Y S+V SN++ + I GT
Sbjct: 256 -----DSANGVRIKTVYDATGSV-----SEVTYSNIKLSGITDYGIVIEQDYENGSPTGT 305
Query: 198 SANKIPCQNIGIGNI---------------------NWVYNGVNVKVEGPETTSLCSNV 235
+P ++ I + +W + GV++ G ET+S C NV
Sbjct: 306 PTTGVPITDLTIDGVTGTVESDAVEVYILCGDGSCSDWTWEGVDIT--GGETSSKCENV 362
>sp|Q27UB3|PGLRX_ASPNG Exopolygalacturonase X OS=Aspergillus niger GN=pgaX PE=3 SV=1
Length = 435
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 104/271 (38%), Gaps = 89/271 (32%)
Query: 53 LNDSTITGIK-SVDSRYFHINILGCYNLKLNDLKITAHADS----PNTEGIHIGSSNGSE 107
LN TI +K +Y+H + N+ + + I+ ++ S NT+G SN
Sbjct: 176 LNGGTIGPLKLRYSPQYYHF-VANSSNVLFDGIDISGYSKSDNEAKNTDGWDTYRSNNIV 234
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV---------- 141
I +SVI GDDCVS HGISVGSLG+ ++ ++V
Sbjct: 235 IQNSVINNGDDCVSFKPNSTNILVQNLHCNGSHGISVGSLGQYKDEVDIVENVYVYNISM 294
Query: 142 ----------------------------GLTVRNCTFTGTNIVTNNVENPIVIDQLYCPY 173
+V+N T+ + +NV+ I I Q Y
Sbjct: 295 FNASDMARIKVWPGTPSALSADLQGGGGSGSVKNITY--DTALIDNVDWAIEITQCYGQK 352
Query: 174 NK--CNIKVPSQVKTSNVRFNNIRG-TSANKIP------------CQNIGIGNINWVYNG 218
N CN + PS + S+V N RG TS ++ P C +I NIN
Sbjct: 353 NTTLCN-EYPSSLTISDVHIKNFRGTTSGSEDPYVGTIVCSSPDTCSDIYTSNIN----- 406
Query: 219 VNVKVEGPETTS--LCSNVKPTLFGKQIPAT 247
V P+ T+ +C NV +L AT
Sbjct: 407 ----VTSPDGTNDFVCDNVDESLLSVNCTAT 433
>sp|A2R060|PGLRX_ASPNC Probable exopolygalacturonase X OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=pgaX PE=3 SV=1
Length = 435
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 104/271 (38%), Gaps = 89/271 (32%)
Query: 53 LNDSTITGIK-SVDSRYFHINILGCYNLKLNDLKITAHADS----PNTEGIHIGSSNGSE 107
LN TI +K +Y+H + N+ + + I+ ++ S NT+G SN
Sbjct: 176 LNGGTIGPLKLRYSPQYYHF-VANSSNVLFDGIDISGYSKSDNEAKNTDGWDTYRSNNIV 234
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV---------- 141
I +SVI GDDCVS HGISVGSLG+ ++ ++V
Sbjct: 235 IQNSVINNGDDCVSFKPNSTNILVQNLHCNGSHGISVGSLGQYKDEVDIVENVYVYNISM 294
Query: 142 ----------------------------GLTVRNCTFTGTNIVTNNVENPIVIDQLYCPY 173
+V+N T+ + +NV+ I I Q Y
Sbjct: 295 FNASDMARIKVWPGTPSALSADLQGGGGSGSVKNITY--DTALIDNVDWAIEITQCYGQK 352
Query: 174 NK--CNIKVPSQVKTSNVRFNNIRG-TSANKIP------------CQNIGIGNINWVYNG 218
N CN + PS + S+V N RG TS ++ P C +I NIN
Sbjct: 353 NTTLCN-EYPSSLTISDVHIKNFRGTTSGSEDPYVGTIVCSSPDTCSDIYTSNIN----- 406
Query: 219 VNVKVEGPETTS--LCSNVKPTLFGKQIPAT 247
V P+ T+ +C NV +L AT
Sbjct: 407 ----VTSPDGTNDFVCDNVDESLLSVNCTAT 433
>sp|Q00293|PGLRX_ASPTU Exopolygalacturonase X OS=Aspergillus tubingensis GN=pgaX PE=1 SV=1
Length = 435
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 105/271 (38%), Gaps = 89/271 (32%)
Query: 53 LNDSTITGIK-SVDSRYFHINILGCYNLKLNDLKITAHA----DSPNTEGIHIGSSNGSE 107
LN TI +K +Y+H + N+ + + I+ ++ ++ NT+G SN
Sbjct: 176 LNGGTIGPLKLRYSPQYYHF-VANSSNVLFDGIDISGYSKSDNEAKNTDGWDTYRSNNIV 234
Query: 108 ISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVV---------- 141
I +SVI GDDCVS HGISVGSLG+ ++ ++V
Sbjct: 235 IQNSVINNGDDCVSFKPNSTNILVQNLHCNGSHGISVGSLGQYKDEVDIVENVYVYNISM 294
Query: 142 ----------------------------GLTVRNCTFTGTNIVTNNVENPIVIDQLYCPY 173
+V+N T+ + +NV+ I I Q Y
Sbjct: 295 FNASDMARIKVWPGTPSALSADLQGGGGSGSVKNITY--DTALIDNVDWAIEITQCYGQK 352
Query: 174 NK--CNIKVPSQVKTSNVRFNNIRG-TSANKIP------------CQNIGIGNINWVYNG 218
N CN + PS + S+V N RG TS ++ P C +I NIN
Sbjct: 353 NTTLCN-EYPSSLTISDVHIKNFRGTTSGSEDPYVGTIVCSSPDTCSDIYTSNIN----- 406
Query: 219 VNVKVEGPETTS--LCSNVKPTLFGKQIPAT 247
V P+ T+ +C NV +L AT
Sbjct: 407 ----VTSPDGTNDFVCDNVDESLLSVNCTAT 433
>sp|Q4WQT2|PGLRA_ASPFU Probable endopolygalacturonase A OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=pgaA
PE=3 SV=1
Length = 368
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 72/239 (30%)
Query: 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT-AHADS---PNTEGIHIGSSNGSEI 108
L DSTITG+ ++ I++ NL L D+ I + D NT+G I S G I
Sbjct: 140 LEDSTITGLSIKNTPVQAISVQ-ATNLYLIDITIDNSDGDDNGGHNTDGFDISESTGVYI 198
Query: 109 SHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
+ + DDC+++ GHG+S+GS+G G +D V +T+ + T T
Sbjct: 199 RGATVKNQDDCIAINSGENIEFSGGTCSGGHGLSIGSVG-GRDDNTVKNVTITDSTVT-- 255
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNI----------------RGT 197
+ N + I +Y SQV SN++ + I GT
Sbjct: 256 -----DSANGVRIKTVYDATGSV-----SQVTYSNIKLSGITDYGIVIEQDYENGSPTGT 305
Query: 198 SANKIPCQNIGIGNI---------------------NWVYNGVNVKVEGPETTSLCSNV 235
+P ++ I + +W + GV++ G E +S C NV
Sbjct: 306 PTTGVPITDLTIDGVTGTVESDAVEVYILCGDGSCSDWTWEGVDIT--GGEKSSKCENV 362
>sp|B0Y4Z4|PGLRA_ASPFC Probable endopolygalacturonase A OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=pgaA PE=3 SV=1
Length = 368
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 94/239 (39%), Gaps = 72/239 (30%)
Query: 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKIT-AHADS---PNTEGIHIGSSNGSEI 108
L DSTITG+ ++ I++ NL L D+ I + D NT+G I S G I
Sbjct: 140 LEDSTITGLSIKNTPVQAISVQ-ATNLYLIDITIDNSDGDDNGGHNTDGFDISESTGVYI 198
Query: 109 SHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153
+ + DDC+++ GHG+S+GS+G G +D V +T+ + T T
Sbjct: 199 RGATVKNQDDCIAINSGENIEFSGGTCSGGHGLSIGSVG-GRDDNTVKNVTITDSTVT-- 255
Query: 154 NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNI----------------RGT 197
+ N + I +Y SQV SN++ + I GT
Sbjct: 256 -----DSANGVRIKTVYDATGSV-----SQVTYSNIKLSGITDYGIVIEQDYENGSPTGT 305
Query: 198 SANKIPCQNIGIGNI---------------------NWVYNGVNVKVEGPETTSLCSNV 235
+P ++ I + +W + GV++ G E +S C NV
Sbjct: 306 PTTGVPITDLTIDGVTGTVESDAVEVYILCGDGSCSDWTWEGVDIT--GGEKSSKCENV 362
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,968,745
Number of Sequences: 539616
Number of extensions: 4121286
Number of successful extensions: 9992
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 9681
Number of HSP's gapped (non-prelim): 235
length of query: 249
length of database: 191,569,459
effective HSP length: 115
effective length of query: 134
effective length of database: 129,513,619
effective search space: 17354824946
effective search space used: 17354824946
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)