Query 042417
Match_columns 249
No_of_seqs 193 out of 1484
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 10:03:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042417.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042417hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rmg_A Rgase A, rhamnogalactur 100.0 2.7E-45 9.2E-50 337.2 25.9 220 1-238 20-356 (422)
2 3jur_A EXO-poly-alpha-D-galact 100.0 6.9E-44 2.4E-48 329.5 19.3 205 1-218 27-414 (448)
3 1bhe_A PEHA, polygalacturonase 100.0 3.2E-40 1.1E-44 299.7 21.7 170 48-237 154-374 (376)
4 1nhc_A Polygalacturonase I; be 100.0 1.9E-40 6.4E-45 297.0 19.1 209 15-237 5-332 (336)
5 2iq7_A Endopolygalacturonase; 100.0 2.7E-40 9.2E-45 296.3 19.2 209 16-237 6-333 (339)
6 1czf_A Polygalacturonase II; b 100.0 4.2E-40 1.4E-44 297.1 18.8 208 16-237 33-358 (362)
7 1hg8_A Endopolygalacturonase; 100.0 2.3E-39 7.9E-44 291.2 22.6 208 17-237 7-345 (349)
8 1ia5_A Polygalacturonase; glyc 100.0 3.4E-39 1.2E-43 289.1 20.2 206 17-237 11-335 (339)
9 2uvf_A Exopolygalacturonase; G 100.0 4.2E-38 1.4E-42 301.1 21.6 190 53-247 339-608 (608)
10 1k5c_A Endopolygalacturonase; 100.0 1.8E-37 6.1E-42 277.3 12.1 200 18-236 8-328 (335)
11 2x6w_A Tail spike protein; vir 100.0 3.1E-33 1.1E-37 261.8 13.6 188 1-217 51-384 (600)
12 2vbk_A Tailspike-protein; vira 99.9 2.6E-27 8.8E-32 212.6 12.5 153 1-170 51-313 (514)
13 1x0c_A Isopullulanase; glycosi 99.9 1.6E-26 5.5E-31 218.1 8.0 95 51-153 290-405 (549)
14 1h80_A IOTA-carrageenase; hydr 99.9 2.3E-25 8E-30 205.9 15.3 168 2-173 22-284 (464)
15 3gq8_A Preneck appendage prote 99.9 4.7E-24 1.6E-28 200.7 20.0 138 1-153 22-246 (609)
16 3gqn_A Preneck appendage prote 99.9 5.8E-24 2E-28 203.2 19.9 138 1-153 22-246 (772)
17 1ogo_X Dextranase; hydrolase, 99.9 4.8E-24 1.6E-28 201.4 16.6 94 52-153 331-443 (574)
18 3eqn_A Glucan 1,3-beta-glucosi 99.8 5.4E-20 1.8E-24 175.9 13.5 179 2-195 50-298 (758)
19 2pyg_A Poly(beta-D-mannuronate 99.8 6.7E-19 2.3E-23 159.0 18.4 44 1-46 2-45 (377)
20 3jur_A EXO-poly-alpha-D-galact 99.6 1.6E-15 5.5E-20 140.0 14.7 156 47-216 215-443 (448)
21 2iq7_A Endopolygalacturonase; 99.4 5.8E-12 2E-16 112.4 15.0 99 47-153 125-255 (339)
22 1bhe_A PEHA, polygalacturonase 99.4 6.6E-12 2.3E-16 113.5 15.3 141 47-207 176-372 (376)
23 2uvf_A Exopolygalacturonase; G 99.4 3.2E-12 1.1E-16 122.2 13.6 158 50-219 359-587 (608)
24 1hg8_A Endopolygalacturonase; 99.4 8.9E-12 3E-16 111.6 14.8 99 47-153 129-267 (349)
25 1ia5_A Polygalacturonase; glyc 99.3 2.2E-11 7.7E-16 108.6 15.1 99 47-153 129-259 (339)
26 1nhc_A Polygalacturonase I; be 99.3 3.2E-11 1.1E-15 107.5 14.1 98 47-153 125-254 (336)
27 1rmg_A Rgase A, rhamnogalactur 99.3 8.3E-11 2.9E-15 107.8 15.9 97 47-153 152-274 (422)
28 1czf_A Polygalacturonase II; b 99.3 9.2E-11 3.2E-15 105.5 15.1 98 47-153 151-280 (362)
29 1k5c_A Endopolygalacturonase; 99.3 7.6E-11 2.6E-15 104.9 14.0 98 47-153 121-251 (335)
30 1h80_A IOTA-carrageenase; hydr 99.1 6.7E-10 2.3E-14 102.7 13.9 42 74-115 106-152 (464)
31 2inu_A Insulin fructotransfera 99.0 1.6E-09 5.5E-14 97.4 11.8 45 1-46 14-68 (410)
32 3gq8_A Preneck appendage prote 99.0 4.8E-09 1.6E-13 99.0 14.4 155 47-216 136-341 (609)
33 3gqn_A Preneck appendage prote 99.0 5.6E-09 1.9E-13 100.3 14.1 155 47-216 136-341 (772)
34 3eqn_A Glucan 1,3-beta-glucosi 98.9 1.1E-09 3.7E-14 105.2 7.0 110 1-116 400-533 (758)
35 1ogo_X Dextranase; hydrolase, 98.7 6.6E-08 2.2E-12 91.4 9.6 141 47-216 349-545 (574)
36 1x0c_A Isopullulanase; glycosi 98.6 3E-07 1E-11 86.7 12.1 145 48-215 310-519 (549)
37 2x6w_A Tail spike protein; vir 98.4 2.7E-06 9.3E-11 80.1 12.0 149 43-213 197-408 (600)
38 2pyg_A Poly(beta-D-mannuronate 98.2 7.9E-06 2.7E-10 73.1 11.7 102 52-153 132-270 (377)
39 1pcl_A Pectate lyase E; lyase 98.0 0.00017 5.7E-09 64.4 14.7 94 16-116 31-154 (355)
40 3zsc_A Pectate trisaccharide-l 98.0 0.0001 3.6E-09 65.2 12.9 98 19-122 36-144 (340)
41 1ru4_A Pectate lyase, PEL9A; p 97.9 0.00011 3.9E-09 66.5 12.1 23 20-46 37-59 (400)
42 2qy1_A Pectate lyase II; GAG l 97.9 5.8E-05 2E-09 66.7 9.9 96 17-116 22-139 (330)
43 1pxz_A Major pollen allergen J 97.8 0.00026 9E-09 62.9 13.0 92 21-120 58-175 (346)
44 1idk_A Pectin lyase A; signal, 97.7 0.00024 8.4E-09 63.4 11.7 72 69-153 124-199 (359)
45 2o04_A Pectate lyase, PL; hexa 97.7 0.00039 1.3E-08 62.9 12.1 47 69-116 143-204 (399)
46 1qcx_A Pectin lyase B; beta-he 97.6 0.00084 2.9E-08 59.9 12.7 72 69-153 124-199 (359)
47 1air_A Pectate lyase C, PELC; 97.6 0.00061 2.1E-08 60.7 11.6 62 54-116 89-151 (353)
48 3vmv_A Pectate lyase; polysacc 97.6 0.00068 2.3E-08 59.7 11.4 92 18-115 28-141 (326)
49 1pe9_A Pectate lyase A; parall 97.3 0.0022 7.6E-08 57.2 11.7 92 17-116 40-165 (361)
50 1xg2_A Pectinesterase 1; prote 97.3 0.00086 2.9E-08 58.9 8.6 117 17-153 14-151 (317)
51 1gq8_A Pectinesterase; hydrola 97.3 0.0011 3.7E-08 58.2 9.1 117 17-153 18-155 (319)
52 2x3h_A K5 lyase, K5A lyase; ba 97.2 0.0068 2.3E-07 52.5 12.9 108 1-115 64-177 (542)
53 1vbl_A Pectate lyase 47; PL 47 97.2 0.0014 4.8E-08 59.5 9.0 49 68-116 147-210 (416)
54 1pcl_A Pectate lyase E; lyase 97.1 0.0033 1.1E-07 56.0 11.1 101 47-153 97-227 (355)
55 1pxz_A Major pollen allergen J 97.1 0.0015 5.1E-08 58.0 8.4 95 47-153 107-226 (346)
56 1dbg_A Chondroitinase B; beta 97.1 0.0023 7.8E-08 59.6 9.8 69 16-89 29-138 (506)
57 3uw0_A Pectinesterase; right-h 97.0 0.0034 1.2E-07 56.1 10.1 120 17-153 43-200 (364)
58 1air_A Pectate lyase C, PELC; 96.9 0.017 5.8E-07 51.3 13.3 97 47-153 104-215 (353)
59 3zsc_A Pectate trisaccharide-l 96.9 0.0045 1.5E-07 54.7 9.4 96 47-153 84-194 (340)
60 2nsp_A Pectinesterase A; micha 96.7 0.017 5.7E-07 51.1 11.9 118 17-153 17-173 (342)
61 1vbl_A Pectate lyase 47; PL 47 96.6 0.0044 1.5E-07 56.3 7.3 101 47-153 149-282 (416)
62 2qy1_A Pectate lyase II; GAG l 96.6 0.034 1.2E-06 48.9 12.9 100 47-153 87-204 (330)
63 1idk_A Pectin lyase A; signal, 96.4 0.0077 2.6E-07 53.7 7.8 65 47-116 125-199 (359)
64 3vmv_A Pectate lyase; polysacc 96.2 0.073 2.5E-06 46.7 12.4 99 47-153 96-204 (326)
65 2o04_A Pectate lyase, PL; hexa 96.0 0.013 4.3E-07 53.0 6.7 100 47-153 144-276 (399)
66 1qcx_A Pectin lyase B; beta-he 95.9 0.025 8.4E-07 50.4 8.5 64 48-116 126-199 (359)
67 1pe9_A Pectate lyase A; parall 95.4 0.021 7E-07 50.9 5.6 101 47-153 104-238 (361)
68 3grh_A YBHC, acyl-COA thioeste 93.8 1.1 3.7E-05 40.5 13.0 74 74-153 198-278 (422)
69 2vbk_A Tailspike-protein; vira 92.8 0.092 3.1E-06 47.8 4.3 69 39-117 190-286 (514)
70 2inu_A Insulin fructotransfera 91.5 0.39 1.3E-05 43.2 6.8 83 35-122 110-211 (410)
71 3t9g_A Pectate lyase; PL3, par 89.7 6.7 0.00023 31.4 14.8 40 77-122 52-92 (196)
72 3t9g_A Pectate lyase; PL3, par 88.4 5.2 0.00018 32.1 10.3 60 55-120 53-112 (196)
73 3ju4_A Endo-N-acetylneuraminid 85.6 0.59 2E-05 42.3 3.7 21 7-27 4-24 (670)
74 1ru4_A Pectate lyase, PEL9A; p 83.6 1.9 6.6E-05 38.6 6.3 59 52-115 113-172 (400)
75 1dbg_A Chondroitinase B; beta 80.7 12 0.00041 34.5 10.6 100 48-153 246-350 (506)
76 2nsp_A Pectinesterase A; micha 80.4 4 0.00014 35.8 6.9 63 52-120 94-177 (342)
77 1gq8_A Pectinesterase; hydrola 71.8 14 0.00047 32.0 7.9 62 52-120 92-159 (319)
78 1ee6_A Pectate lyase; parallel 71.6 37 0.0013 27.1 9.7 40 77-122 48-88 (197)
79 1xg2_A Pectinesterase 1; prote 71.2 13 0.00045 32.0 7.7 62 52-120 88-155 (317)
80 3uw0_A Pectinesterase; right-h 60.7 44 0.0015 29.3 9.1 64 52-120 120-204 (364)
81 1ee6_A Pectate lyase; parallel 51.0 93 0.0032 24.8 12.2 60 55-120 49-108 (197)
82 3riq_A Tailspike protein; righ 42.6 1.5E+02 0.0051 26.7 9.2 38 105-152 309-346 (543)
83 2vfm_A Bifunctional tail prote 42.0 73 0.0025 28.1 7.1 38 105-152 318-355 (559)
84 3b4n_A Endo-pectate lyase; pec 40.2 1.8E+02 0.0063 25.1 12.0 40 78-122 159-199 (344)
85 3grh_A YBHC, acyl-COA thioeste 32.1 1.7E+02 0.0058 26.2 8.1 63 52-120 199-282 (422)
86 2v5i_A Salmonella typhimurium 31.9 91 0.0031 27.5 6.1 38 105-152 321-358 (559)
87 2xc1_A Bifunctional tail prote 27.2 1.3E+02 0.0043 27.7 6.3 38 105-152 425-462 (666)
88 1j5p_A Aspartate dehydrogenase 22.4 62 0.0021 26.9 3.3 24 19-44 98-121 (253)
No 1
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=100.00 E-value=2.7e-45 Score=337.24 Aligned_cols=220 Identities=24% Similarity=0.441 Sum_probs=193.0
Q ss_pred CeeeeecCccCCCccchHHHHHHHHHHHhhcCCCCcEEEecCCeEE----------------------------------
Q 042417 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL---------------------------------- 46 (249)
Q Consensus 1 ~~~v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~---------------------------------- 46 (249)
+++|+||||++||++|||+|||+|| ++|+ + +++|+||+|+|+
T Consensus 20 ~~~V~~~GA~~dg~tddT~Aiq~Ai-~ac~--~-g~~V~vP~G~Yli~~~l~l~g~s~v~l~l~G~~l~~~~~~~~~~~~ 95 (422)
T 1rmg_A 20 TCNILSYGAVADNSTDVGPAITSAW-AACK--S-GGLVYIPSGNYALNTWVTLTGGSATAIQLDGIIYRTGTASGNMIAV 95 (422)
T ss_dssp EEEGGGGTCCCSSSSBCHHHHHHHH-HHHT--B-TCEEEECSSEEEECSCEEEESCEEEEEEECSEEEECCCCSSEEEEE
T ss_pred EEEeeeccccCCCCcccHHHHHHHH-HHCC--C-CCEEEECCCeEEeCCceeecCCCeEEEEEcCcEEcccCCCCceEEE
Confidence 4799999999999999999999999 4785 3 679999999998
Q ss_pred ---------------------------------EEEEEecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCCCCC
Q 042417 47 ---------------------------------SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSP 93 (249)
Q Consensus 47 ---------------------------------~i~~~~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~~~ 93 (249)
+|+|.+|+|++|++++|+|+++|++++..|+|++|+|++|++ .+++
T Consensus 96 ~~~~~~~~i~i~G~G~IdG~G~~~w~~~~~rp~~i~~~~~~nv~I~~iti~nsp~~~i~i~~~~nv~I~n~~I~~-~d~~ 174 (422)
T 1rmg_A 96 TDTTDFELFSSTSKGAVQGFGYVYHAEGTYGARILRLTDVTHFSVHDIILVDAPAFHFTMDTCSDGEVYNMAIRG-GNEG 174 (422)
T ss_dssp EEEEEEEEECSSSCCEEECCTHHHHTTTCCCCEEEEEEEEEEEEEEEEEEECCSSCSEEEEEEEEEEEEEEEEEC-CSST
T ss_pred EecCceeEEeeccCEEEECCcchhhcCCCCCceEEEEcccceEEEECeEEECCCceEEEEeCcCCEEEEeEEEEC-CCCC
Confidence 456677899999999999999999999999999999999999 5568
Q ss_pred CCcceEecCcccEEEEeeEEecCCCeeEe----------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc----
Q 042417 94 NTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---- 153 (249)
Q Consensus 94 n~DGi~~~~s~nv~I~n~~i~~gDD~i~i----------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~---- 153 (249)
|+||||+.+ +||+|+||+|.++||||++ +|||+|||+|.+ +.|+||+|+||+|.++
T Consensus 175 ntDGidi~~-~nV~I~n~~i~~gDD~Iai~s~~~nI~I~n~~~~~~~GisIGS~g~~---~~v~nV~v~n~~~~~~~~Gi 250 (422)
T 1rmg_A 175 GLDGIDVWG-SNIWVHDVEVTNKDECVTVKSPANNILVESIYCNWSGGCAMGSLGAD---TDVTDIVYRNVYTWSSNQMY 250 (422)
T ss_dssp TCCSEEEEE-EEEEEEEEEEESSSEEEEEEEEEEEEEEEEEEEESSSEEEEEEECTT---EEEEEEEEEEEEEESSSCSE
T ss_pred CCccEeecC-CeEEEEeeEEeCCCCeEEeCCCCcCEEEEeEEEcCCcceeecccCCC---CcEEEEEEEeEEEeccceEE
Confidence 999999999 9999999999999999999 789999999643 4799999999999987
Q ss_pred -----------------ceEEecCCccEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccC-----C--------Cc
Q 042417 154 -----------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN-----K--------IP 203 (249)
Q Consensus 154 -----------------nI~~~nv~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~-----~--------~~ 203 (249)
||+|++++++|.|+++|+.... .....+.|+||+|+||+++... . .|
T Consensus 251 ~Ikt~~g~G~v~nI~~~NI~~~~v~~~i~i~~~y~~~~~---~~~~~~~i~nI~~~nI~gt~~~g~~~~~i~i~~~~~~~ 327 (422)
T 1rmg_A 251 MIKSNGGSGTVSNVLLENFIGHGNAYSLDIDGYWSSMTA---VAGDGVQLNNITVKNWKGTEANGATRPPIRVVCSDTAP 327 (422)
T ss_dssp EEEEBBCCEEEEEEEEEEEEEEEESCSEEEETBCTTSCC---BSSSCCEEEEEEEEEEEEEESCTTTSCSEEEECBTTBC
T ss_pred EEEecCCCcEEEEEEEEeEEEECccccEEEEeeccCCCc---ccCCCceEEEEEEEeEEEEecccccceeEEEEeCCCCc
Confidence 6666667889999999976432 2345689999999999999742 1 68
Q ss_pred eecEEEEeEEEEEcCceeecCCCCCcceeecccCc
Q 042417 204 CQNIGIGNINWVYNGVNVKVEGPETTSLCSNVKPT 238 (249)
Q Consensus 204 ~~~i~~~nv~i~~~~g~~~~~~~~~~~~c~n~~~~ 238 (249)
|++|+|+||+|+.+.|+ + ..+.|+|++|.
T Consensus 328 ~~ni~l~nv~i~~~~g~-----~-~~~~C~n~~g~ 356 (422)
T 1rmg_A 328 CTDLTLEDIAIWTESGS-----S-ELYLCRSAYGS 356 (422)
T ss_dssp EEEEEEEEEEEEESSSS-----C-EEEEEESEEEE
T ss_pred EeeEEEEeEEEEcCCCC-----c-cceEEECCCcc
Confidence 99999999999998875 4 67999999875
No 2
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=100.00 E-value=6.9e-44 Score=329.53 Aligned_cols=205 Identities=25% Similarity=0.349 Sum_probs=179.2
Q ss_pred CeeeeecCccCCCccchHHHHHHHHHHHhhcCCCCcEEEecCCeEE----------------------------------
Q 042417 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL---------------------------------- 46 (249)
Q Consensus 1 ~~~v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~---------------------------------- 46 (249)
+|||+||||+|||.+|||+|||+|| ++|++.| +++|+||+|+|+
T Consensus 27 ~~~v~~~GA~gdg~tddt~Aiq~Ai-~~c~~~g-gg~v~vP~G~yl~~~l~l~s~v~l~l~gtL~~s~d~~~y~p~~~~~ 104 (448)
T 3jur_A 27 EVNLLDFGARGDGRTDCSESFKRAI-EELSKQG-GGRLIVPEGVFLTGPIHLKSNIELHVKGTIKFIPDPERYLPVVLTR 104 (448)
T ss_dssp EEEGGGGTCCCEEEEECHHHHHHHH-HHHHHHT-CEEEEECSSEEEESCEECCTTEEEEESSEEEECCCGGGGCSCEEEE
T ss_pred EEEEEecccCCCCCeecHHHHHHHH-HhhhhcC-CeEEEECCCcEEEeeeEeCCCcEEEEEEEEEecCCHHHhCcccccc
Confidence 4899999999999999999999999 5777666 789999999999
Q ss_pred --------------------------------E-----------------------------------------------
Q 042417 47 --------------------------------S----------------------------------------------- 47 (249)
Q Consensus 47 --------------------------------~----------------------------------------------- 47 (249)
.
T Consensus 105 ~~G~~~~~~~~lI~~~~~~ni~ItG~GtIDG~G~~~~ww~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~ 184 (448)
T 3jur_A 105 FEGIELYNYSPLVYALDCENVAITGSGVLDGSADNEHWWPWKGKKDFGWKEGLPNQQEDVKKLKEMAERGTPVEERVFGK 184 (448)
T ss_dssp ETTEEEEESCCSEEEESCEEEEEESSCEEECCCBTTBBGGGGCCGGGTCCTTSCCSHHHHHHHHHHHHHTCCGGGCBCST
T ss_pred cccccccCccceEEEeCcEeeEEEEeEEEECCCCchhhhhhcccccccccccccccccchhhhhhhhcccCcchhhhccc
Confidence 1
Q ss_pred --------EEEEecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCCe
Q 042417 48 --------IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDC 119 (249)
Q Consensus 48 --------i~~~~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~ 119 (249)
|.|.+|+|++|+|++++|+|+|++++..|+|++|++++|.++ ++|+||||+.+|+||+|+||+|.+||||
T Consensus 185 ~~~~RP~~i~~~~~~nv~i~giti~nsp~~~i~~~~~~nv~i~~v~I~~~--~~NtDGidi~~s~nV~I~n~~i~~gDDc 262 (448)
T 3jur_A 185 GHYLRPSFVQFYRCRNVLVEGVKIINSPMWCIHPVLSENVIIRNIEISST--GPNNDGIDPESCKYMLIEKCRFDTGDDS 262 (448)
T ss_dssp TCCCCCCSEEEESCEEEEEESCEEESCSSCSEEEESCEEEEEESCEEEEC--STTCCSBCCBSCEEEEEESCEEEESSEE
T ss_pred cccCCceEEEEEcccceEEEeeEEEeCCCceEeeeccCCEEEEeEEEeec--cCCCccccccCCcCEEEEeeEEEeCCCc
Confidence 335668889999999999999999999999999999999986 6899999999999999999999999999
Q ss_pred eEe-----------------------------Cc-ceEEccCCCCCCCCceEeEEEEeeEEEcc----------------
Q 042417 120 VSL-----------------------------GH-GISVGSLGKGINDEEVVGLTVRNCTFTGT---------------- 153 (249)
Q Consensus 120 i~i-----------------------------g~-Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~---------------- 153 (249)
|++ || |++|||+ +.+.|+||+|+||+|.++
T Consensus 263 Iaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~gh~gisiGS~----~~~~v~nV~v~n~~~~~t~~GirIKt~~g~gG~v 338 (448)
T 3jur_A 263 VVIKSGRDADGRRIGVPSEYILVRDNLVISQASHGGLVIGSE----MSGGVRNVVARNNVYMNVERALRLKTNSRRGGYM 338 (448)
T ss_dssp EEEBCCCHHHHHHHCCCEEEEEEESCEEECSSCSEEEEECSS----CTTCEEEEEEESCEEESCSEEEEEECCTTTCSEE
T ss_pred EEeccCccccccccCCCceeEEEEEeEEecCCCcceEEECCc----ccCcEEEEEEEEEEEecccceEEEEEEcCCCceE
Confidence 998 56 8999999 457899999999999887
Q ss_pred ------ceEEecCCccE-EEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccCC---------CceecEEEEeEEEEEc
Q 042417 154 ------NIVTNNVENPI-VIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNINWVYN 217 (249)
Q Consensus 154 ------nI~~~nv~~~i-~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~~---------~~~~~i~~~nv~i~~~ 217 (249)
||+|+|+.+++ .|+++|+... .+..+.|+||+|+||+++.... .||++|+|+||+|+..
T Consensus 339 ~nI~f~ni~m~~v~~~~i~I~~~Y~~~~-----~~~~~~i~nI~~~NI~~t~~~~~i~i~g~~~~p~~~I~~~nv~i~~~ 413 (448)
T 3jur_A 339 ENIFFIDNVAVNVSEEVIRINLRYDNEE-----GEYLPVVRSVFVKNLKATGGKYAVRIEGLENDYVKDILISDTIIEGA 413 (448)
T ss_dssp EEEEEESCEEEEESSEEEEEESCGGGCC-----CSCCCEEEEEEEESCEEEECSEEEEEECBTTBCEEEEEEEEEEEESC
T ss_pred eeEEEEEEEEECCccccEEEEeeccCCC-----CCCCceEEEEEEEeEEEEecceEEEEEeCCCCCEeeEEEEEEEEEcc
Confidence 55566667777 9999998651 1234689999999999987432 7999999999999964
Q ss_pred C
Q 042417 218 G 218 (249)
Q Consensus 218 ~ 218 (249)
.
T Consensus 414 ~ 414 (448)
T 3jur_A 414 K 414 (448)
T ss_dssp S
T ss_pred c
Confidence 4
No 3
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=100.00 E-value=3.2e-40 Score=299.70 Aligned_cols=170 Identities=29% Similarity=0.388 Sum_probs=150.6
Q ss_pred EEEEecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCCeeEe-----
Q 042417 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----- 122 (249)
Q Consensus 48 i~~~~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i~i----- 122 (249)
|.|.+|+|++|++++++|+|+|++++..|++++|++++|.++..++|+||||+.+|+||+|+||+|.+|||||++
T Consensus 154 i~~~~~~nv~I~~iti~nsp~~~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~gDDcIaiks~~~ 233 (376)
T 1bhe_A 154 IQINKSKNFTLYNVSLINSPNFHVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIATGDDNVAIKAYKG 233 (376)
T ss_dssp EEEESCEEEEEEEEEEECCSSCSEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEECSSCSEEEEECTT
T ss_pred EEEEcceEEEEEeEEEECCCcEEEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEecCCCeEEEcccCC
Confidence 346668889999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred ----------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc----------------------ceEEecCCccE
Q 042417 123 ----------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNVENPI 164 (249)
Q Consensus 123 ----------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~----------------------nI~~~nv~~~i 164 (249)
|||++|||+ +. .|+||+|+||+|.++ ||+|+++++||
T Consensus 234 ~~~s~nI~I~n~~~~~ghGisiGSe----~~-~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ni~f~ni~~~~v~~~i 308 (376)
T 1bhe_A 234 RAETRNISILHNDFGTGHGMSIGSE----TM-GVYNVTVDDLKMNGTTNGLRIKSDKSAAGVVNGVRYSNVVMKNVAKPI 308 (376)
T ss_dssp SCCEEEEEEEEEEECSSSCEEEEEE----ES-SEEEEEEEEEEEESCSEEEEEECCTTTCCEEEEEEEEEEEEESCSEEE
T ss_pred CCCceEEEEEeeEEEccccEEeccC----Cc-cEeeEEEEeeEEeCCCcEEEEEEecCCCceEeeEEEEeEEEeCCCceE
Confidence 799999998 33 899999999999998 77788888999
Q ss_pred EEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccCC--------CceecEEEEeEEEEEcCceeecCCCCCcceeeccc
Q 042417 165 VIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK--------IPCQNIGIGNINWVYNGVNVKVEGPETTSLCSNVK 236 (249)
Q Consensus 165 ~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~~--------~~~~~i~~~nv~i~~~~g~~~~~~~~~~~~c~n~~ 236 (249)
.|++.|++... +..+.|+||+|+||+++.... .||++|+|+||+|+.+ ..|.|+|+.
T Consensus 309 ~i~~~y~~~~~-----~~~~~i~ni~~~ni~gt~~~~~~l~g~~~~~~~~I~l~nv~l~~~----------~~~~~~~~~ 373 (376)
T 1bhe_A 309 VIDTVYEKKEG-----SNVPDWSDITFKDVTSETKGVVVLNGENAKKPIEVTMKNVKLTSD----------STWQIKNVN 373 (376)
T ss_dssp EEETTSSCCCC-----CCCCEEEEEEEEEEEECSCCEEEEECTTCSSCEEEEEEEEECCTT----------CEEEEESEE
T ss_pred EEEeeccCCCC-----CcCcEEEEEEEEEEEEEecceEEEEeCCCCCeeeEEEEeEEEecC----------CCceEEEEE
Confidence 99999987521 234689999999999997654 7899999999999854 348999985
Q ss_pred C
Q 042417 237 P 237 (249)
Q Consensus 237 ~ 237 (249)
.
T Consensus 374 ~ 374 (376)
T 1bhe_A 374 V 374 (376)
T ss_dssp E
T ss_pred e
Confidence 3
No 4
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=1.9e-40 Score=296.97 Aligned_cols=209 Identities=26% Similarity=0.420 Sum_probs=181.6
Q ss_pred cchHHHHHHHHHHHhhcCCCCcEEEecCCeEE------------------------------------------------
Q 042417 15 KDDSKAFETAWREACNWDGIKSAVLVPPGKYL------------------------------------------------ 46 (249)
Q Consensus 15 ~ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~------------------------------------------------ 46 (249)
..||+|||+|+ ++|+..| +++|+||+|+|+
T Consensus 5 ~~~t~aiq~ai-~~c~~~g-g~~v~vP~G~~~~l~~l~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~gG~IdG 82 (336)
T 1nhc_A 5 FTSASEASESI-SSCSDVV-LSSIEVPAGETLDLSDAADGSTITFEGTTSFGYKEWKGPLIRFGGKDLTVTMADGAVIDG 82 (336)
T ss_dssp ESSHHHHHHHG-GGCSEEE-EESCEECTTCCEECTTCCTTCEEEEESEEEECCCCSCCCSEECCEESCEEEECTTCEEEC
T ss_pred ECCHHHHHHHH-HHhhccC-CCeEEECCCEEEEeeccCCCeEEEEeceEEcccccccCcEEEEecCCEEEEcCCCeEEEC
Confidence 46899999999 7888776 789999999987
Q ss_pred -------------------EEEEEecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCCC----CCCCcceEecCc
Q 042417 47 -------------------SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD----SPNTEGIHIGSS 103 (249)
Q Consensus 47 -------------------~i~~~~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~----~~n~DGi~~~~s 103 (249)
+|.|.+|+|++|++++|+|+|+|++++. |+|++|++++|.++.. ++|+||||+.+|
T Consensus 83 ~G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s 161 (336)
T 1nhc_A 83 DGSRWWDSKGTNGGKTKPKFMYIHDVEDSTFKGINIKNTPVQAISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISES 161 (336)
T ss_dssp CGGGTCCSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSC
T ss_pred CccccccccCcCCCCCCceEEEEeeeCcEEEEEEEEEeCCccEEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCC
Confidence 3788889999999999999999999999 9999999999999753 799999999999
Q ss_pred ccEEEEeeEEecCCCeeEe---------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc---------------
Q 042417 104 NGSEISHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT--------------- 153 (249)
Q Consensus 104 ~nv~I~n~~i~~gDD~i~i---------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~--------------- 153 (249)
+||+|+||+|.++||||++ +|||+|||+|.+ +.+.|+||+|+||+|.++
T Consensus 162 ~nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~girIkt~~g~~G~ 240 (336)
T 1nhc_A 162 TGVYISGATVKNQDDCIAINSGESISFTGGTCSGGHGLSIGSVGGR-DDNTVKNVTISDSTVSNSANGVRIKTIYKETGD 240 (336)
T ss_dssp EEEEEESCEEESSSEEEEESSEEEEEEESCEEESSSEEEEEEESSS-SCCEEEEEEEEEEEEESCSEEEEEEEETTCCCE
T ss_pred CeEEEEeCEEEcCCCEEEEeCCeEEEEEeEEEECCcCceEccCccc-cCCCEEEEEEEeeEEECCCcEEEEEEECCCCCE
Confidence 9999999999999999999 899999999876 457899999999999988
Q ss_pred -------ceEEecCCc-cEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccC-C---------CceecEEEEeEEEE
Q 042417 154 -------NIVTNNVEN-PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN-K---------IPCQNIGIGNINWV 215 (249)
Q Consensus 154 -------nI~~~nv~~-~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~-~---------~~~~~i~~~nv~i~ 215 (249)
||+|++++. ||.|++.|+....+. .+++.++|+||+|+||+++... . .||++|+|+||+|+
T Consensus 241 v~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~-~p~~~~~i~~i~~~ni~gt~~~~~~~v~i~c~~~~c~ni~~~nv~i~ 319 (336)
T 1nhc_A 241 VSEITYSNIQLSGITDYGIVIEQDYENGSPTG-TPSTGIPITDVTVDGVTGTLEDDATQVYILCGDGSCSDWTWSGVDLS 319 (336)
T ss_dssp EEEEEEEEEEEEEESSEEEEEEEEEETTEECS-CCCSSSCEEEEEEEEEEEEECTTCEEEEEECCTTCEEEEEEEEEEEE
T ss_pred EeeeEEeeEEeeccccccEEEEeecCCCCCCC-CCCCCceEEEEEEEeEEEEeCCCCEEEEEEcCCCcEecEEEEeEEEE
Confidence 666666664 999999998743222 2234679999999999999876 2 78999999999999
Q ss_pred EcCceeecCCCCCcceeecccC
Q 042417 216 YNGVNVKVEGPETTSLCSNVKP 237 (249)
Q Consensus 216 ~~~g~~~~~~~~~~~~c~n~~~ 237 (249)
. + + ..+.|+|+++
T Consensus 320 ~--~------~-~~~~C~n~~~ 332 (336)
T 1nhc_A 320 G--G------K-TSDKCENVPS 332 (336)
T ss_dssp S--S------B-CCSCCBSCCT
T ss_pred c--C------C-CCcccCCCCC
Confidence 4 2 2 4578999985
No 5
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=100.00 E-value=2.7e-40 Score=296.29 Aligned_cols=209 Identities=26% Similarity=0.393 Sum_probs=181.2
Q ss_pred chHHHHHHHHHHHhhcCCCCcEEEecCCeEE-------------------------------------------------
Q 042417 16 DDSKAFETAWREACNWDGIKSAVLVPPGKYL------------------------------------------------- 46 (249)
Q Consensus 16 ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~------------------------------------------------- 46 (249)
.||+|||+|+ ++|+..| +++|+||+|+|+
T Consensus 6 ~dt~aiq~ai-~~c~~~~-g~~v~vP~G~~~~l~~l~~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~gG~IdG~ 83 (339)
T 2iq7_A 6 TDAAAAIKGK-ASCTSII-LNGIVVPAGTTLDMTGLKSGTTVTFQGKTTFGYKEWEGPLISFSGTNININGASGHSIDCQ 83 (339)
T ss_dssp SCHHHHHHHG-GGCSEEE-EESCEECTTCCEEECSCCTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTCEEECC
T ss_pred CCHHHHHHHH-HHhhccC-CCeEEECCCEEEEeeccCCCeEEEEeCcEEcccccccCcEEEEEcccEEEEcCCCCEEECC
Confidence 5899999999 7888766 789999999987
Q ss_pred ------------------EEEEEecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCCC----CCCCcceEecCcc
Q 042417 47 ------------------SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD----SPNTEGIHIGSSN 104 (249)
Q Consensus 47 ------------------~i~~~~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~----~~n~DGi~~~~s~ 104 (249)
+|.|.+|+|++|++++++|+|+|++++..|+|++|++++|.++.. ++|+||||+.+|+
T Consensus 84 G~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~ 163 (339)
T 2iq7_A 84 GSRWWDSKGSNGGKTKPKFFYAHSLKSSNIKGLNVLNTPVQAFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSST 163 (339)
T ss_dssp GGGTCCSCGGGSSSCCCCCEEEEEEEEEEEECCEEECCSSCCEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCE
T ss_pred cccccccccccCCCCCCeEEEEeeeCcEEEEEEEEEeCCcceEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcc
Confidence 378888999999999999999999999999999999999998743 7899999999999
Q ss_pred cEEEEeeEEecCCCeeEe---------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc----------------
Q 042417 105 GSEISHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---------------- 153 (249)
Q Consensus 105 nv~I~n~~i~~gDD~i~i---------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~---------------- 153 (249)
||+|+||+|.++||||++ +|||+|||+|.+ +.+.++||+|+||+|.++
T Consensus 164 nV~I~n~~i~~gDDciaiksg~nI~i~n~~~~~ghGisiGSlg~~-~~~~v~nV~v~n~~~~~~~~girIkt~~g~~G~v 242 (339)
T 2iq7_A 164 GVYISGANVKNQDDCLAINSGTNITFTGGTCSGGHGLSIGSVGGR-SDNTVKTVTISNSKIVNSDNGVRIKTVSGATGSV 242 (339)
T ss_dssp EEEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEE
T ss_pred eEEEEecEEecCCCEEEEcCCccEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcEEEEEEeCCCCeEE
Confidence 999999999999999999 899999998766 457899999999999997
Q ss_pred ------ceEEecCCc-cEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccC-C---------CceecEEEEeEEEEE
Q 042417 154 ------NIVTNNVEN-PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN-K---------IPCQNIGIGNINWVY 216 (249)
Q Consensus 154 ------nI~~~nv~~-~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~-~---------~~~~~i~~~nv~i~~ 216 (249)
||+|++++. ||.|++.|++...+. .+.+.++|+||+|+||+++... . .||++|+|+||+|+.
T Consensus 243 ~nI~~~ni~~~~v~~~~i~i~~~y~~~~~~~-~p~~~~~i~ni~~~ni~gt~~~~~~~~~i~c~~~~c~ni~~~nv~i~~ 321 (339)
T 2iq7_A 243 SGVTYSGITLSNIAKYGIVIEQDYENGSPTG-TPTNGVPITGLTLSKITGSVASSGTNVYILCASGACSNWKWSGVSVTG 321 (339)
T ss_dssp EEEEEEEEEEEEESSEEEEEEEEEETTEECS-CCCSSSCEEEEEEEEEEEEECTTSEEEEEECCTTCEEEEEEEEEEEES
T ss_pred EEEEEEeEEccCcccccEEEEeecCCCCCCC-CCCCCceEEEEEEEeEEEEeCCCCEEEEEEeCCCcEecEEEEeEEEEc
Confidence 666666665 999999998743221 2234579999999999999876 2 689999999999983
Q ss_pred cCceeecCCCCCcceeecccC
Q 042417 217 NGVNVKVEGPETTSLCSNVKP 237 (249)
Q Consensus 217 ~~g~~~~~~~~~~~~c~n~~~ 237 (249)
+ + ..+.|+|++.
T Consensus 322 --~------~-~~~~C~n~~~ 333 (339)
T 2iq7_A 322 --G------K-KSTKCSNIPS 333 (339)
T ss_dssp --S------B-CCSCCBCCCT
T ss_pred --C------C-CcccccCCCC
Confidence 2 2 4578999874
No 6
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=100.00 E-value=4.2e-40 Score=297.14 Aligned_cols=208 Identities=23% Similarity=0.402 Sum_probs=179.8
Q ss_pred chHHHHHHHHHHHhhcCCCCcEEEecCCeEE-------------------------------------------------
Q 042417 16 DDSKAFETAWREACNWDGIKSAVLVPPGKYL------------------------------------------------- 46 (249)
Q Consensus 16 ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~------------------------------------------------- 46 (249)
.+++|||+|+ ++|+..+ +++|+||+|+|+
T Consensus 33 ~~~~aiq~ai-~~c~~~~-g~~v~vP~G~~l~l~~l~~~~~l~~~g~~~~~~~~w~g~~i~~~~~nv~I~G~~~g~IdG~ 110 (362)
T 1czf_A 33 TTAAAAKAGK-AKCSTIT-LNNIEVPAGTTLDLTGLTSGTKVIFEGTTTFQYEEWAGPLISMSGEHITVTGASGHLINCD 110 (362)
T ss_dssp SSHHHHHHHG-GGCSEEE-EESCEECTTCCEEECSCCTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTCEEECC
T ss_pred CCHHHHHHHH-HHhhccC-CCEEEECCCEEEEeeccCCCeEEEEeCcEEeccccCCCcEEEEeCccEEEEcCCCcEEECC
Confidence 3489999999 7887766 789999999987
Q ss_pred -----------------EEEEEecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCC-C---CCCCcceEecCccc
Q 042417 47 -----------------SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA-D---SPNTEGIHIGSSNG 105 (249)
Q Consensus 47 -----------------~i~~~~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~-~---~~n~DGi~~~~s~n 105 (249)
+|+|.+|+|++|++++++|+|+|++++. |+||+|+|++|+++. + ++|+||||+.+|+|
T Consensus 111 G~~~w~~~~~~~~~rP~~i~~~~~~nv~i~~iti~nsp~~~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~n 189 (362)
T 1czf_A 111 GARWWDGKGTSGKKKPKFFYAHGLDSSSITGLNIKNTPLMAFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVG 189 (362)
T ss_dssp GGGTCCSCTTSSSCCCCCEEEEEEETEEEESCEEECCSSCCEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEE
T ss_pred CchhhcccCCCCCCCCeEEEEeecccEEEEEEEEecCCccEEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcce
Confidence 3788999999999999999999999999 999999999999964 3 78999999999999
Q ss_pred EEEEeeEEecCCCeeEe---------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc-----------------
Q 042417 106 SEISHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------- 153 (249)
Q Consensus 106 v~I~n~~i~~gDD~i~i---------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~----------------- 153 (249)
|+|+||+|.++||||++ +|||+|||+|.+ +.+.|+||+|+||+|.++
T Consensus 190 V~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~n~~~~~t~~GirIKt~~g~~G~v~ 268 (362)
T 1czf_A 190 VNIIKPWVHNQDDCLAVNSGENIWFTGGTCIGGHGLSIGSVGDR-SNNVVKNVTIEHSTVSNSENAVRIKTISGATGSVS 268 (362)
T ss_dssp EEEESCEEECSSCSEEESSEEEEEEESCEEESSCCEEEEEECSS-SCCEEEEEEEEEEEEEEEEEEEEEEEETTCCEEEE
T ss_pred EEEEeeEEecCCCEEEEeCCeEEEEEEEEEeCCceeEEeecccc-CCCCEEEEEEEeeEEECCceEEEEEEeCCCCceEe
Confidence 99999999999999999 899999999876 457899999999999987
Q ss_pred -----ceEEecCC-ccEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccC-C---------CceecEEEEeEEEEEc
Q 042417 154 -----NIVTNNVE-NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN-K---------IPCQNIGIGNINWVYN 217 (249)
Q Consensus 154 -----nI~~~nv~-~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~-~---------~~~~~i~~~nv~i~~~ 217 (249)
||+|+++. +||.|++.|++...+. .+++.++|+||+|+||+++... . .||+||+|+||+|+.
T Consensus 269 nI~~~ni~~~~v~~~~i~I~~~Y~~~~~~~-~p~~~~~i~nI~~~ni~gt~~~~~~~i~i~c~~~~c~ni~~~nv~i~~- 346 (362)
T 1czf_A 269 EITYSNIVMSGISDYGVVIQQDYEDGKPTG-KPTNGVTIQDVKLESVTGSVDSGATEIYLLCGSGSCSDWTWDDVKVTG- 346 (362)
T ss_dssp EEEEEEEEEEEEEEEEEEEEEEEETTEECS-CCCSSEEEEEEEEEEEEEEECTTSEEEEEECCTTTEEEEEEEEEEEES-
T ss_pred eEEEEeEEEECcccccEEEEEecCCCCCCC-CCCCCceEEEEEEEEEEEEecCCceEEEEEeCCCcCcCEEEEeEEEEc-
Confidence 55666665 6999999998743222 2235689999999999999876 2 699999999999984
Q ss_pred CceeecCCCCCcceeecccC
Q 042417 218 GVNVKVEGPETTSLCSNVKP 237 (249)
Q Consensus 218 ~g~~~~~~~~~~~~c~n~~~ 237 (249)
+ + ..+.|+|+++
T Consensus 347 -~------~-~~~~C~n~~~ 358 (362)
T 1czf_A 347 -G------K-KSTACKNFPS 358 (362)
T ss_dssp -S------B-CCSCCBSCCT
T ss_pred -C------C-CcccCcCCCC
Confidence 2 2 4578999885
No 7
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=100.00 E-value=2.3e-39 Score=291.17 Aligned_cols=208 Identities=26% Similarity=0.388 Sum_probs=179.8
Q ss_pred hHHHHHHHHHHHhhcCCCCcEEEecCCeEE--------------------------------------------------
Q 042417 17 DSKAFETAWREACNWDGIKSAVLVPPGKYL-------------------------------------------------- 46 (249)
Q Consensus 17 dt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~-------------------------------------------------- 46 (249)
||+|||+|+ ++|+..| +++|+||+|+|+
T Consensus 7 ~t~aiq~ai-~~c~~~g-g~~v~vP~G~~l~l~~l~~~~~l~~~g~~~~~~~~w~~g~~i~~~~~ni~I~G~~~G~IdG~ 84 (349)
T 1hg8_A 7 EYSGLATAV-SSCKNIV-LNGFQVPTGKQLDLSSLQNDSTVTFKGTTTFATTADNDFNPIVISGSNITITGASGHVIDGN 84 (349)
T ss_dssp SGGGHHHHH-HHCSEEE-ECCCEECTTCCEEETTCCTTCEEEECSEEEECCCCCTTCCSEEEEEESCEEEECTTCEEECC
T ss_pred CHHHHHHHH-HhccccC-CCEEEECCCEEEEeeccCCCeEEEEcCceecccccccCCceEEEECccEEEEecCCCEEcCC
Confidence 789999999 7887766 789999999987
Q ss_pred -------------------EEEE-E-ecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCC-C-----------CC
Q 042417 47 -------------------SIRF-N-FLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA-D-----------SP 93 (249)
Q Consensus 47 -------------------~i~~-~-~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~-~-----------~~ 93 (249)
+|.| . .++|++|++++++|+|+|++++..|++++|++++|.++. + ++
T Consensus 85 G~~ww~~~~~~~~~~~rP~~i~~~~~~~~nv~I~giti~nsp~~~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~ 164 (349)
T 1hg8_A 85 GQAYWDGKGSNSNSNQKPDHFIVVQKTTGNSKITNLNIQNWPVHCFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAH 164 (349)
T ss_dssp GGGTCCSCTTCTTSCCCCSEEEEEEEEESSEEEESCEEECCSSEEEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCC
T ss_pred cchhhhcccccCCCCCCCeEEEEeecCcCcEEEEEEEEEcCCCceEEEeccCCEEEEEEEEECCCCccccccccccccCC
Confidence 4567 6 688999999999999999999999999999999999852 2 58
Q ss_pred CCcceEecCcccEEEEeeEEecCCCeeEe---------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc-----
Q 042417 94 NTEGIHIGSSNGSEISHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----- 153 (249)
Q Consensus 94 n~DGi~~~~s~nv~I~n~~i~~gDD~i~i---------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~----- 153 (249)
|+||||+.+|+||+|+||++.++||||++ ||||+|||+|++ +.+.|+||+|+||+|.++
T Consensus 165 NtDGid~~~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~G~~-~~~~v~nV~v~n~~~~~~~~Gir 243 (349)
T 1hg8_A 165 NTDGFDISSSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCSGGHGLSIGSVGGK-SDNVVDGVQFLSSQVVNSQNGCR 243 (349)
T ss_dssp SCCSEEEESCEEEEEEEEEEECSSCSEEESSEEEEEEEEEEEESSCCEEEEEESSS-SCCEEEEEEEEEEEEEEEEEEEE
T ss_pred CCCeEEEccccEEEEEeeEEecCCCeEEeeCCeEEEEEeEEEeCCcceEEcccccc-ccCCEEEEEEEEEEEECCCcEEE
Confidence 99999999999999999999999999999 899999999876 557899999999999998
Q ss_pred -----------------ceEEecCC-ccEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccC-C---------Ccee
Q 042417 154 -----------------NIVTNNVE-NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN-K---------IPCQ 205 (249)
Q Consensus 154 -----------------nI~~~nv~-~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~-~---------~~~~ 205 (249)
||+|++++ +||.|++.|+....+. .+++.++|+||+|+||+++... . .||+
T Consensus 244 IKt~~g~~G~v~nI~~~ni~~~~v~~~~i~i~~~Y~~~~~~~-~p~~~~~i~~I~~~ni~gt~~~~~~~v~i~c~~~~c~ 322 (349)
T 1hg8_A 244 IKSNSGATGTINNVTYQNIALTNISTYGVDVQQDYLNGGPTG-KPTNGVKISNIKFIKVTGTVASSAQDWFILCGDGSCS 322 (349)
T ss_dssp EEEETTCCEEEEEEEEEEEEEEEEEEEEEEEEEEECSSSBCS-CCCSSEEEEEEEEEEEEEEECTTSEEEEEECCSSCEE
T ss_pred EEecCCCCccccceEEEEEEEEccccccEEEEeeccCCCCCC-cccCCceEEEEEEEeEEEEeCCCCEEEEEEeCCCcCc
Confidence 66666665 6999999998754322 2335689999999999999877 2 7899
Q ss_pred cEEEEeEEEEEcCceeecCCCCCcceeecccC
Q 042417 206 NIGIGNINWVYNGVNVKVEGPETTSLCSNVKP 237 (249)
Q Consensus 206 ~i~~~nv~i~~~~g~~~~~~~~~~~~c~n~~~ 237 (249)
||+|+||+|+.. + ....|.|+++
T Consensus 323 ni~~~nv~i~~~--------~-~~~~C~n~~~ 345 (349)
T 1hg8_A 323 GFTFSGNAITGG--------G-KTSSCNYPTN 345 (349)
T ss_dssp EEEEESCEEECC--------S-SCCEECSSSS
T ss_pred CEEEEeEEEEcC--------C-CCeeeeCCCC
Confidence 999999999842 2 4578999986
No 8
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=100.00 E-value=3.4e-39 Score=289.07 Aligned_cols=206 Identities=27% Similarity=0.412 Sum_probs=178.5
Q ss_pred hHHHHHHHHHHHhhcCCCCcEEEecCCeEE--------------------------------------------------
Q 042417 17 DSKAFETAWREACNWDGIKSAVLVPPGKYL-------------------------------------------------- 46 (249)
Q Consensus 17 dt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~-------------------------------------------------- 46 (249)
-++|||+|+ ++|+..| +++|+||+|+|+
T Consensus 11 g~~aiq~ai-~~c~~~g-g~~v~vP~G~~l~l~~l~~~~~l~~~g~~~~~~~~w~g~li~~~~~nv~I~G~~gG~IdG~G 88 (339)
T 1ia5_A 11 GASSASKSK-TSCSTIV-LSNVAVPSGTTLDLTKLNDGTHVIFSGETTFGYKEWSGPLISVSGSDLTITGASGHSINGDG 88 (339)
T ss_dssp HHHHHHHHG-GGCSEEE-EESCEECTTCCEEECSCCTTCEEEEESEEEECCCCSCCCSEEEEEESCEEEECTTCEEECCG
T ss_pred chHHHHHHH-HHhhccC-CCeEEECCCEEEEeeccCCCeEEEEeCcEEcccccccCcEEEEEcCcEEEEcCCCeEEeCCC
Confidence 478999999 7888776 789999999987
Q ss_pred -----------------EEEEEecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCCC----CCCCcceEecCccc
Q 042417 47 -----------------SIRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHAD----SPNTEGIHIGSSNG 105 (249)
Q Consensus 47 -----------------~i~~~~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~----~~n~DGi~~~~s~n 105 (249)
+|+|.+|+|++|++++++|+|+|++++..|+|++|++++|.++.+ ++|+||||+.+|+|
T Consensus 89 ~~~w~~~~~~~~~~rp~~i~~~~~~nv~i~~i~i~nsp~~~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~n 168 (339)
T 1ia5_A 89 SRWWDGEGGNGGKTKPKFFAAHSLTNSVISGLKIVNSPVQVFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTY 168 (339)
T ss_dssp GGTCSSCTTTSSSCCCCCEEEEEEEEEEEESCEEECCSSCCEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEE
T ss_pred CccccccccCCCCCCCeEEEEeecCcEEEEEEEEEcCCcceEEEecccCeEEeeEEEECCccccccCCCCCcEEecCCce
Confidence 478888999999999999999999999999999999999998743 78999999999999
Q ss_pred EEEEeeEEecCCCeeEe---------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc-----------------
Q 042417 106 SEISHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------- 153 (249)
Q Consensus 106 v~I~n~~i~~gDD~i~i---------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~----------------- 153 (249)
|+|+||+|.++||||++ +|||+|||+|.+ +.+.|+||+|+||+|.++
T Consensus 169 V~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisiGS~g~~-~~~~v~nV~v~n~~~~~t~~girIKt~~g~~G~v~ 247 (339)
T 1ia5_A 169 VTISGATVYNQDDCVAVNSGENIYFSGGYCSGGHGLSIGSVGGR-SDNTVKNVTFVDSTIINSDNGVRIKTNIDTTGSVS 247 (339)
T ss_dssp EEEESCEEECSSCSEEESSEEEEEEESCEEESSSCEEEEEECSS-SCCEEEEEEEEEEEEESCSEEEEEEEETTCCCEEE
T ss_pred EEEEeeEEEcCCCeEEEeCCeEEEEEeEEEECCceEEECcCCcc-cCCCEEEEEEEeeEEECCCcEEEEEEeCCCCcEEE
Confidence 99999999999999999 899999998766 457899999999999998
Q ss_pred -----ceEEecCCc-cEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccC-C---------CceecEEEEeEEEEEc
Q 042417 154 -----NIVTNNVEN-PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN-K---------IPCQNIGIGNINWVYN 217 (249)
Q Consensus 154 -----nI~~~nv~~-~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~-~---------~~~~~i~~~nv~i~~~ 217 (249)
||+|++++. ||.|++.|.. .. . .+.+.++|+||+|+||+++... . .||++|+|+||+|+.
T Consensus 248 nI~~~ni~~~~v~~~~i~i~~~y~~-~~-~-~p~~~~~i~ni~~~ni~gt~~~~~~~v~i~c~~~~c~ni~~~nv~i~~- 323 (339)
T 1ia5_A 248 DVTYKDITLTSIAKYGIVVQQNYGD-TS-S-TPTTGVPITDFVLDNVHGSVVSSGTNILISCGSGSCSDWTWTDVSVSG- 323 (339)
T ss_dssp EEEEEEEEEEEESSEEEEEEEEETC-TT-S-CCCSSSCEEEEEEEEEEEEECTTSEEEEEECCTTCEEEEEEEEEEEES-
T ss_pred eeEEEEEEEECcccccEEEEccCCC-CC-C-CCcCCceEEEEEEEeEEEEeCCCCEEEEEEeCCCCEecEEEEeEEEEC-
Confidence 666666765 9999999932 21 1 2234579999999999999876 2 789999999999983
Q ss_pred CceeecCCCCCcceeecccC
Q 042417 218 GVNVKVEGPETTSLCSNVKP 237 (249)
Q Consensus 218 ~g~~~~~~~~~~~~c~n~~~ 237 (249)
+ + ..+.|+|+++
T Consensus 324 -~------~-~~~~C~n~~~ 335 (339)
T 1ia5_A 324 -G------K-TSSKCTNVPS 335 (339)
T ss_dssp -S------B-CCSCCBSCCT
T ss_pred -C------C-CCeeeECCCC
Confidence 2 2 4578999885
No 9
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=100.00 E-value=4.2e-38 Score=301.11 Aligned_cols=190 Identities=21% Similarity=0.250 Sum_probs=139.1
Q ss_pred cCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCCeeEe----------
Q 042417 53 LNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL---------- 122 (249)
Q Consensus 53 ~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i~i---------- 122 (249)
|+|++|+|++|+++|+|++++..|+|++|+|++|.. .+++|+||||+.+|+||+|+||+|.+|||||++
T Consensus 339 ~~nv~I~giti~ns~~~~i~~~~~~nv~i~~v~i~~-~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~ 417 (608)
T 2uvf_A 339 VENVYLAGFTVRNPAFHGIMNLENHNVVANGLIHQT-YDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQE 417 (608)
T ss_dssp EEEEEEESCEEECCSSCSEEEESCEEEEEESCEEEC-TTCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGG
T ss_pred eeeEEEeCcEEecCCCCEEEEecCCCEEEeeEEEcC-CCCCCCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccc
Confidence 556788899999999999999999999999999865 457899999999999999999999999999988
Q ss_pred ----------------Ccce-EEccCCCCCCCCceEeEEEEeeEEEcc----------------------ceEEecC-Cc
Q 042417 123 ----------------GHGI-SVGSLGKGINDEEVVGLTVRNCTFTGT----------------------NIVTNNV-EN 162 (249)
Q Consensus 123 ----------------g~Gi-~iGs~g~~~~~~~v~ni~v~n~~~~~~----------------------nI~~~nv-~~ 162 (249)
+||+ .|||+ +.+.|+||+|+||+|.++ ||+|+|+ ++
T Consensus 418 ~~~s~nI~I~n~~~~~ghg~~~iGS~----~~~~v~nI~v~n~~~~~t~~GirIKt~~g~gG~v~nI~~~ni~m~~v~~~ 493 (608)
T 2uvf_A 418 QEPMKGAWLFNNYFRMGHGAIVTGSH----TGAWIEDILAENNVMYLTDIGLRAKSTSTIGGGARNVTFRNNAMRDLAKQ 493 (608)
T ss_dssp SCCEEEEEEESCEECSSSCSEEEESC----CTTCEEEEEEESCEEESCSEEEEEEEETTTCCEEEEEEEEEEEEEEESSE
T ss_pred cccccCEEEEeEEEeCCCCeEEEccc----CCCCEEEEEEEeEEEECCCceEEEeeecCCCceEECcEEEeeEEEccccc
Confidence 5776 48997 678999999999999988 6667777 48
Q ss_pred cEEEEeeeCCCCCCCcC----CC---CceeEEeEEEEeEEEEccCC---------CceecEEEEeEEEEEcCcee-----
Q 042417 163 PIVIDQLYCPYNKCNIK----VP---SQVKTSNVRFNNIRGTSANK---------IPCQNIGIGNINWVYNGVNV----- 221 (249)
Q Consensus 163 ~i~i~~~y~~~~~~~~~----~~---~~~~i~nI~~~ni~g~~~~~---------~~~~~i~~~nv~i~~~~g~~----- 221 (249)
||.|++.|+....+... .+ +.+.|+||+++|++++.... .||++|+|+||+++...+..
T Consensus 494 ~i~I~~~y~~~~~~~~~~~~~~~~~~~~V~i~nI~~~n~~gt~~~i~i~g~~~~~~p~~ni~~~nv~i~~~~~~~i~~~~ 573 (608)
T 2uvf_A 494 VMVMTLDYADSNANIDYPPAKIPAQFYDFTLKNVTVDNSTGKNPSIEIKGDTANKAWHRLVHVNNVQLNNVTPTAISDLR 573 (608)
T ss_dssp EEEEEEECCCCSCCCSSCCCSSCCEEEEEEEEEEEEEEECSSSCSEEEECBGGGTBCEEEEEEEEEEEESCCCCEEESEE
T ss_pred cEEEEeccCCCCcccccCCcCCCCccccEEEEeEEEEeeeceEEeEEEEEEcCCCCccccEEEEeEEEEccCceeEEecc
Confidence 99999999865431101 11 22344444444444422111 47888888888887654210
Q ss_pred -------ecCCC--CCcceeecccCccCCcccCCC
Q 042417 222 -------KVEGP--ETTSLCSNVKPTLFGKQIPAT 247 (249)
Q Consensus 222 -------~~~~~--~~~~~c~n~~~~~~~~~~~~~ 247 (249)
..+.. ...|.|.++.+....-+.|.|
T Consensus 574 ~~~~~nv~i~~~~~~~~~~~~~v~~~~~~~v~~~p 608 (608)
T 2uvf_A 574 DSEFNKVTFTELRGDTPWHFSEVKNVKVDGKPVAP 608 (608)
T ss_dssp SCEEEEEEEESCSSSCSCCEESCBSCCBTTCCC--
T ss_pred CceEEeEEEeCCCCCccEEEEeeeceEEcceEeCC
Confidence 00001 035888888887763366655
No 10
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=100.00 E-value=1.8e-37 Score=277.30 Aligned_cols=200 Identities=20% Similarity=0.255 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEecCCeEE---------------------------------------------------
Q 042417 18 SKAFETAWREACNWDGIKSAVLVPPGKYL--------------------------------------------------- 46 (249)
Q Consensus 18 t~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~--------------------------------------------------- 46 (249)
++|||+ + ++|+..| +++|+||+|+|+
T Consensus 8 ~~aiq~-i-~aC~~~g-g~~v~vP~G~~l~l~l~~~~~l~~~g~~~~~~~~w~~~~i~~~~~ni~I~G~~G~idG~G~~w 84 (335)
T 1k5c_A 8 VDDAKD-I-AGCSAVT-LNGFTVPAGNTLVLNPDKGATVTMAGDITFAKTTLDGPLFTIDGTGINFVGADHIFDGNGALY 84 (335)
T ss_dssp TTGGGG-C-TTCSEEE-ECCEEECTTCCEEECCCTTCEEEECSCEEECCCCSCSCSEEEEEEEEEEECTTCEEECCGGGT
T ss_pred HHHhHH-H-HhcccCC-CCEEEECCCEEEEEEeCCCeEEEEeccEecccccccCcEEEEEccCEEEEeCccEEcCChhHh
Confidence 689999 8 7898777 789999999987
Q ss_pred --------------EEEEEecCCCceeceeEecccCeEEEEEceee-EEEEeeEEecCCC-----CCCCcceEecCcccE
Q 042417 47 --------------SIRFNFLNDSTITGIKSVDSRYFHINILGCYN-LKLNDLKITAHAD-----SPNTEGIHIGSSNGS 106 (249)
Q Consensus 47 --------------~i~~~~~~nv~i~gi~i~ns~~~~i~~~~s~n-v~I~n~~i~~~~~-----~~n~DGi~~~~s~nv 106 (249)
+|.|.+|+ ++|++++++|+|+|++++..|+| |+|+|++|+++.+ ++|+||||+ +|+||
T Consensus 85 w~~~~~~~~~~rP~~i~~~~~~-v~i~giti~nsp~~~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV 162 (335)
T 1k5c_A 85 WDGKGTNNGTHKPHPFLKIKGS-GTYKKFEVLNSPAQAISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNV 162 (335)
T ss_dssp CCSCTTTSSSCCCCCSEEEEEE-EEEESCEEESCSSCCEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSE
T ss_pred hhcccccCCCCCCeEEEEeceE-EEEEEEEEECCCcceEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeE
Confidence 47778888 99999999999999999999999 9999999999743 899999999 99999
Q ss_pred EEEeeEEecCCCeeEe---------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc------------------
Q 042417 107 EISHSVIATGDDCVSL---------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT------------------ 153 (249)
Q Consensus 107 ~I~n~~i~~gDD~i~i---------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~------------------ 153 (249)
+|+||+|.+|||||++ +|||+|||++. .+.|+||+|+||+|.++
T Consensus 163 ~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~ghGisIGS~g~---~~~v~nV~v~n~~~~~t~~girIKt~~g~~~G~v~ 239 (335)
T 1k5c_A 163 TIQNCIVKNQDDCIAINDGNNIRFENNQCSGGHGISIGSIAT---GKHVSNVVIKGNTVTRSMYGVRIKAQRTATSASVS 239 (335)
T ss_dssp EEESCEEESSSCSEEEEEEEEEEEESCEEESSCCEEEEEECT---TCEEEEEEEESCEEEEEEEEEEEEEETTCCSCEEE
T ss_pred EEEeeEEEcCCCEEEeeCCeeEEEEEEEEECCccCeEeeccC---CCCEEEEEEEeeEEECCCceEEEEEeCCCCcceEe
Confidence 9999999999999999 89999999964 46899999999999988
Q ss_pred -----ceEEecCC-ccEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEE--EEccC-C--------CceecEEEEeEEEEE
Q 042417 154 -----NIVTNNVE-NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIR--GTSAN-K--------IPCQNIGIGNINWVY 216 (249)
Q Consensus 154 -----nI~~~nv~-~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~--g~~~~-~--------~~~~~i~~~nv~i~~ 216 (249)
||+|++++ +||.|++.|... . . .+++.++|+||+|+||+ |+... . .||++|+|+||+|+.
T Consensus 240 nI~f~ni~~~~v~~~~i~i~~~Y~~~-~-~-~p~~~~~i~nI~~~nI~~~Gt~~~~~~~i~i~c~~~c~ni~~~nv~i~~ 316 (335)
T 1k5c_A 240 GVTYDANTISGIAKYGVLISQSYPDD-V-G-NPGTGAPFSDVNFTGGATTIKVNNAATRVTVECGNCSGNWNWSQLTVTG 316 (335)
T ss_dssp EEEEESCEEEEEEEEEEEEEEEETSS-S-S-SCCSSSCEEEEEECSSCEEEEECTTCEEEEEECSSEESEEEEEEEEEES
T ss_pred eeEEEEEEEEccccccEEEEeeCCCC-C-C-CCCCCceEEEEEEEEEEEeeEEcCCceEEEEECCCcCCCEEEEeEEEEc
Confidence 55555665 699999999322 1 1 22346799999999999 87765 2 479999999999997
Q ss_pred cCceeecCCCCCcceeeccc
Q 042417 217 NGVNVKVEGPETTSLCSNVK 236 (249)
Q Consensus 217 ~~g~~~~~~~~~~~~c~n~~ 236 (249)
.+. ....|.++.
T Consensus 317 ~~~--------~~~~~~~~~ 328 (335)
T 1k5c_A 317 GKA--------GTIKSDKAK 328 (335)
T ss_dssp SBC--------CCEECTTCE
T ss_pred CCC--------CceEeEEeE
Confidence 553 346666554
No 11
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=100.00 E-value=3.1e-33 Score=261.79 Aligned_cols=188 Identities=14% Similarity=0.130 Sum_probs=151.2
Q ss_pred CeeeeecCccCCCccchHHHHHHHHHHHhhcCCCCcEEEecCC-eEEE--------------EEE---------------
Q 042417 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG-KYLS--------------IRF--------------- 50 (249)
Q Consensus 1 ~~~v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G-~y~~--------------i~~--------------- 50 (249)
++||+||||+|| ||+|||+|| ++|++.| +++|+||+| +|+. |.|
T Consensus 51 ~~nV~dfGA~gD----dT~AIqkAI-daCs~~G-GgtV~VPaG~tYLt~sv~~gp~~~~sGpI~LkSnVtL~LdGtL~as 124 (600)
T 2x6w_A 51 SGNVIQPGPNVD----SRQYLQAAI-DYVSSNG-GGTITIPAGYTWYLGSYGVGGIAGHSGIIQLRSNVNLNIEGRIHLS 124 (600)
T ss_dssp TSCBCCCCTTCC----CHHHHHHHH-HHHHHTT-CEEEEECTTCEEEECSCCCGGGGGGTEEEECCTTEEEEECSEEEEC
T ss_pred EEeeecCCCCcc----CHHHHHHHH-HHhhhcC-CCEEEECCCCEEEecccccccccccccceEEcCceEEeeecEEEEc
Confidence 479999999999 999999999 5787777 899999999 8853 100
Q ss_pred ----------------------EecCC---------------------------------CceeceeEecc-cCeEEEE-
Q 042417 51 ----------------------NFLND---------------------------------STITGIKSVDS-RYFHINI- 73 (249)
Q Consensus 51 ----------------------~~~~n---------------------------------v~i~gi~i~ns-~~~~i~~- 73 (249)
.+.+| ..|+|++++|+ |+|++++
T Consensus 125 ~d~~~yp~~~~v~~~w~slI~~~~~~NItItG~GtIDGqG~~wW~~~~~~~~RP~l~f~~c~I~GITi~NSDP~w~I~iG 204 (600)
T 2x6w_A 125 PFFDLKPFQVFVGFDNGDPASSGNLENCHIYGHGVVDFGGYEFGASSQLRNGVAFGRSYNCSVTGITFQNGDVTWAITLG 204 (600)
T ss_dssp GGGTTSCEEEEECCSSSSGGGCCCEEEEEEESSCEEECTTCCCSSTTCCEEEEECCSEEEEEEESCEEESCCCSCSEEEC
T ss_pred CChHHCcccccccccccceEEEecceeEEEecceeeeCCccccccccccCCCCCEEEEeeeEEeCeEEECCCCccEEEeC
Confidence 00001 11678999999 9999999
Q ss_pred --EceeeEEEEeeE----EecCCCCCCCcceEecCcccEEEEeeEEecCCCeeEe----------------Cc-ceEEcc
Q 042417 74 --LGCYNLKLNDLK----ITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL----------------GH-GISVGS 130 (249)
Q Consensus 74 --~~s~nv~I~n~~----i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i~i----------------g~-Gi~iGs 130 (249)
..|+||+|+|++ |++ ++|+||| |+|+||+|.+|||||+| || ||+|||
T Consensus 205 ~~~~c~NVtI~nvtfi~aI~s---spNTDGI-------V~I~nc~I~tGDDCIAI~KSGs~~ni~~e~~~~GHgGISIGS 274 (600)
T 2x6w_A 205 WNGYGSNCYVRKCRFINLVNS---SVNADHS-------TVYVNCPYSGVESCYFSMSSSFARNIACSVQLHQHDTFYRGS 274 (600)
T ss_dssp BTTBEEEEEEESCEEECCCCC---SSCCCEE-------EEEECSSSEEEESCEEECCCTTHHHHEEEEEECSSSEEEESC
T ss_pred CCCCcccEEEeCeEEcceEec---CCCCCEE-------EEEEeeEEecCCcEEEEecCCCcCCeEEEEEcCCCCcEEecc
Confidence 999999999999 776 7899999 99999999999999999 35 899999
Q ss_pred CCCCCCCCceEeEEEEeeEEEcc-------------ceEEecCCccEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEE
Q 042417 131 LGKGINDEEVVGLTVRNCTFTGT-------------NIVTNNVENPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGT 197 (249)
Q Consensus 131 ~g~~~~~~~v~ni~v~n~~~~~~-------------nI~~~nv~~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~ 197 (249)
+ +.+.|+||+|+| .+... ||+|+|++++|.+++.. ..++.++|+||+|+||+++
T Consensus 275 e----~~ggV~NV~V~N-rIKt~~G~GG~V~NItfeNI~m~nV~~~I~i~q~~--------~~~s~~~IsnItfkNItgT 341 (600)
T 2x6w_A 275 T----VNGYCRGAYVVM-HAAEAAGAGSYAYNMQVENNIAVIYGQFVILGSDV--------TATVSGHLNDVIVSGNIVS 341 (600)
T ss_dssp E----EEEESEEEEEEE-CGGGCTTTCSEEEEEEEESCEEEESSEEEEEEECB--------CSSCBCEEEEEEEESCEEE
T ss_pred c----ccCcEEEEEEEE-EEEeecCCCceEEEEEEEEEEEEccceEEEeCCCC--------CCCCCceEEEEEEEeEEEE
Confidence 8 567899999877 33322 67777777788777541 2345679999999999999
Q ss_pred ccCC-----------------------CceecEEEEeEEEEEc
Q 042417 198 SANK-----------------------IPCQNIGIGNINWVYN 217 (249)
Q Consensus 198 ~~~~-----------------------~~~~~i~~~nv~i~~~ 217 (249)
.... .++++++|+|+.+..+
T Consensus 342 sas~aav~~~~g~~i~g~p~~~~~~~~~~Ie~V~~~~~~~~~~ 384 (600)
T 2x6w_A 342 IGERAAFSAPFGAFIDIGPDNSGASNVQDIQRVLVTGNSFYAP 384 (600)
T ss_dssp ECSCCTTSSSCEEEEEECCCTTCCSSSCCEEEEEEESCEEECC
T ss_pred eccccccccccceEEEecCcccccccccceeEEEEeceEEEcC
Confidence 7432 3799999999999653
No 12
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=99.94 E-value=2.6e-27 Score=212.63 Aligned_cols=153 Identities=15% Similarity=0.301 Sum_probs=118.7
Q ss_pred CeeeeecCccCCCccchHHHHHHHHHHHhhcCCCCcEEEecCC----eEE---EE-------------------------
Q 042417 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPG----KYL---SI------------------------- 48 (249)
Q Consensus 1 ~~~v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G----~y~---~i------------------------- 48 (249)
++||+||||+|||++|||+|||+||++||+..| |++|+||+| +|+ .|
T Consensus 51 ~~NVkDFGAkGDGvTDDTaAIQkAIdaA~a~~G-GGtVyVPaG~~~~tYlvt~tI~LkSnV~L~Ge~~AtIl~s~~~I~G 129 (514)
T 2vbk_A 51 AISILDFGVIDDGVTDNYQAIQNAIDAVASLPS-GGELFIPASNQAVGYIVGSTLLIPGGVNIRGVGKASQLRAKSGLTG 129 (514)
T ss_dssp CCBGGGGCCCCSSSSCCHHHHHHHHHHHHTSTT-CEEEECCCCSSTTCEEESSCEEECTTEEEECCSTTSEEEECTTCCS
T ss_pred EEEeeccCcCCCCCcccHHHHHHHHHHHhhcCC-CeEEEECCCCcceeEEECCeEEecCCeEEEEecCceEeeccccccc
Confidence 479999999999999999999999988877656 789999999 887 00
Q ss_pred -----------EEEe---------------------------------cCCCceecee--EecccCeEEEEEceeeEEEE
Q 042417 49 -----------RFNF---------------------------------LNDSTITGIK--SVDSRYFHINILGCYNLKLN 82 (249)
Q Consensus 49 -----------~~~~---------------------------------~~nv~i~gi~--i~ns~~~~i~~~~s~nv~I~ 82 (249)
.+.+ ++++.+++++ +.++++|++++..|++++++
T Consensus 130 tIia~~y~s~I~~~~VeNIaITG~GTIDG~g~n~t~e~~~~Rq~~~~~fdnV~Vn~Vt~~v~~Sg~WTIhPi~Cqnvt~r 209 (514)
T 2vbk_A 130 SVLRLSYDSDTIGRYLRNIRVTGNNTCNGIDTNITAEDSVIRQVYGWVFDNVMVNEVETAYLMQGLWHSKFIACQAGTCR 209 (514)
T ss_dssp EEEEECCCSCCSCEEEESCEEECCSSSEEEEESCCTTCSSCCCEESEEEESCEEEEEEEEEEEESEEEEEEESCEEEEEE
T ss_pred cEEeccCCccccccCceEEEEECCCeEeCCCCCccccceeeeccceEEeeeEEEEeEEEeEeccCcEEEeEeccCceecc
Confidence 0111 2334444443 33566788888888777776
Q ss_pred -eeEEecCCCCCCCcceEecCcccEEEEeeEEecCCCeeEe------------------Ccc-eEEccCCCCCCCCceEe
Q 042417 83 -DLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------------------GHG-ISVGSLGKGINDEEVVG 142 (249)
Q Consensus 83 -n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i~i------------------g~G-i~iGs~g~~~~~~~v~n 142 (249)
++++. ++|+||+|.+|.|..|||||++ -|| +.+|||. +.++|+|
T Consensus 210 ~gL~f~-------------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~hgav~igSE~---m~~Gvk~ 273 (514)
T 2vbk_A 210 VGLHFL-------------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVRSEAIILDSET---MCIGFKN 273 (514)
T ss_dssp EEEEEE-------------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBCCEEEEEESSE---EEESCSE
T ss_pred cCcccc-------------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhcccccEEECchh---hcccccc
Confidence 44442 3899999999999999999999 454 7888883 5678999
Q ss_pred -EEEEeeEEEcc-----------ceEEecCCccEEEEeee
Q 042417 143 -LTVRNCTFTGT-----------NIVTNNVENPIVIDQLY 170 (249)
Q Consensus 143 -i~v~n~~~~~~-----------nI~~~nv~~~i~i~~~y 170 (249)
|++++|.|.++ .+.++|+..++.+...|
T Consensus 274 ~v~v~~Clf~~td~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (514)
T 2vbk_A 274 AVYVHDCLDLHMEQLDLDYCGSTGVVIENVNGGFSFSNSW 313 (514)
T ss_dssp EEEESCCEEEEEESEEEEEESSEEEEESCCEEEEEEEEEE
T ss_pred cEEEEeeeccCCccccccccCCcceEEEeccCceeeccce
Confidence 99999999998 78889988777665444
No 13
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=99.93 E-value=1.6e-26 Score=218.06 Aligned_cols=95 Identities=13% Similarity=0.160 Sum_probs=83.3
Q ss_pred EecCCCceeceeEecccCeEEEEE-ce-ee--EEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCCeeEe----
Q 042417 51 NFLNDSTITGIKSVDSRYFHINIL-GC-YN--LKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL---- 122 (249)
Q Consensus 51 ~~~~nv~i~gi~i~ns~~~~i~~~-~s-~n--v~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i~i---- 122 (249)
.+|+|++|+|++++|+|+|++++. .| ++ ++|+++++.++. .+|+||||+. +||+|+||+|.+|||||++
T Consensus 290 ~~c~nV~I~Giti~Nsp~w~i~i~~~~~~ni~V~I~n~~i~~~~-~~NTDGidi~--~nV~I~n~~i~~gDDcIaIks~N 366 (549)
T 1x0c_A 290 NSSQTFVLNGVTVSAPPFNSMDWSGNSLDLITCRVDDYKQVGAF-YGQTDGLEMY--PGTILQDVFYHTDDDGLKMYYSN 366 (549)
T ss_dssp SSCEEEEEESCEEECCSSCSEEEECSCGGGEEEEEEEEEEECCC-BTTCCCCBCC--TTCEEEEEEEEESSCCEECCSSS
T ss_pred CCceEEEEECcEEECCCceeEEeeccCCCCCeEEEEeeEeEcCC-CCCCCccccc--CCEEEEeeEEeCCCCEEEECCCC
Confidence 667788999999999999999965 55 69 999999998743 4689999999 9999999999999999999
Q ss_pred ------------Ccc-eEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 123 ------------GHG-ISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 123 ------------g~G-i~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
+|+ |++||. .+.|+||+|+||+|.++
T Consensus 367 I~I~n~~~~~~~g~~~IsiGs~-----~~~V~NV~v~n~~i~~s 405 (549)
T 1x0c_A 367 VTARNIVMWKESVAPVVEFGWT-----PRNTENVLFDNVDVIHQ 405 (549)
T ss_dssp EEEEEEEEEECSSSCSEECCBS-----CCCEEEEEEEEEEEEEC
T ss_pred EEEEeeEEEcCCCCceEEECCC-----CCcEEEEEEEeeEEECc
Confidence 456 899984 36899999999999865
No 14
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.93 E-value=2.3e-25 Score=205.93 Aligned_cols=168 Identities=17% Similarity=0.215 Sum_probs=120.7
Q ss_pred ee-eeecCccCCCccchHHHHHHHHHHHhhcC-CCCcEEEecCCeEE----------EEEEE------ecCC--------
Q 042417 2 FN-VKDFGAVADGIKDDSKAFETAWREACNWD-GIKSAVLVPPGKYL----------SIRFN------FLND-------- 55 (249)
Q Consensus 2 ~~-v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~-g~g~~v~iP~G~y~----------~i~~~------~~~n-------- 55 (249)
++ |+||||+|||.+|||+|||+|| ++|++. | +++|+||+|+|+ .|.+. ...+
T Consensus 22 ~~~V~dfGA~gDG~tDdT~Aiq~Ai-dac~~~~g-gg~V~vP~GtYl~g~I~lks~v~L~l~~GatL~~s~~td~~~y~~ 99 (464)
T 1h80_A 22 YDLVDDFGANGNDTSDDSNALQRAI-NAISRKPN-GGTLLIPNGTYHFLGIQMKSNVHIRVESDVIIKPTWNGDGKNHRL 99 (464)
T ss_dssp EEHHHHHCCCTTSSSBCHHHHHHHH-HHHHTSTT-CEEEEECSSEEEECSEECCTTEEEEECTTCEEEECCCTTCSCEEE
T ss_pred eeehhccCcCCCCCchhHHHHHHHH-HHHhhccC-CcEEEECCCeEEEeeEeccCceEEEEcCCcEEEeccCCCcccCCc
Confidence 56 9999999999999999999999 567655 6 789999999996 12211 1110
Q ss_pred ------CceeceeEeccc-------------Ce-EEEEEceeeEEEEeeEEecCCCC--------CCCcceEecCcccEE
Q 042417 56 ------STITGIKSVDSR-------------YF-HINILGCYNLKLNDLKITAHADS--------PNTEGIHIGSSNGSE 107 (249)
Q Consensus 56 ------v~i~gi~i~ns~-------------~~-~i~~~~s~nv~I~n~~i~~~~~~--------~n~DGi~~~~s~nv~ 107 (249)
..+++++|.... .+ .+.+..|+|++|+++++...+.- .|+||+++ .|+||+
T Consensus 100 ~~~~~~~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~w~ih~s~~V~i~NtDGi~i-~s~nV~ 178 (464)
T 1h80_A 100 FEVGVNNIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDNKTIFASILVDVTERNGRLH-WSRNGI 178 (464)
T ss_dssp EEESSSSCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECCSCBSCSEEECEEEETTEEE-EEEEEE
T ss_pred eEeecccCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEeccceEeeceeeeeecCCCcee-eccCEE
Confidence 235555555432 12 36778999999999999764322 26799999 789999
Q ss_pred EEeeEEecCCCeeEe------------------CcceEEccCC----CCCCCCceEeEEEEeeEEEcc------------
Q 042417 108 ISHSVIATGDDCVSL------------------GHGISVGSLG----KGINDEEVVGLTVRNCTFTGT------------ 153 (249)
Q Consensus 108 I~n~~i~~gDD~i~i------------------g~Gi~iGs~g----~~~~~~~v~ni~v~n~~~~~~------------ 153 (249)
|+||+|.++||+++. ++|+.|.+-+ .. ..+.++||+|+||+|.+.
T Consensus 179 I~n~~I~~gddgiGs~~~~~~~NV~V~n~~~~gg~GIrIktg~d~IG~~-~~g~v~NI~~~Ni~~~nv~~~I~I~p~~~~ 257 (464)
T 1h80_A 179 IERIKQNNALFGYGLIQTYGADNILFRNLHSEGGIALRMETDNLLMKNY-KQGGIRNIFADNIRCSKGLAAVMFGPHFMK 257 (464)
T ss_dssp EEEEEEESCCTTCEEEEESEEEEEEEEEEEEESSEEEEEECCCHHHHHH-TCCEEEEEEEEEEEEESSSEEEEEECTTCB
T ss_pred EeceEEecCCCeEEecccCCEeEEEEEeeEEECCCEEEEEeCCceeccC-CCCcEEEEEEEeEEEECCceeEEEeCCCce
Confidence 999999999998872 3455554320 11 235799999999998887
Q ss_pred --ceEEec-----CCccEEEEeeeCCC
Q 042417 154 --NIVTNN-----VENPIVIDQLYCPY 173 (249)
Q Consensus 154 --nI~~~n-----v~~~i~i~~~y~~~ 173 (249)
||+++| +.+++.+++.|++.
T Consensus 258 isnItfeNI~~t~~~~aI~i~q~y~~~ 284 (464)
T 1h80_A 258 NGDVQVTNVSSVSCGSAVRSDSGFVEL 284 (464)
T ss_dssp CCCEEEEEEEEESSSCSEEECCCCCEE
T ss_pred EeEEEEEEEEEEccceeEEEecCcccc
Confidence 444444 45688888777654
No 15
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.92 E-value=4.7e-24 Score=200.71 Aligned_cols=138 Identities=21% Similarity=0.272 Sum_probs=105.5
Q ss_pred CeeeeecCccCCCccchHHHHHHHHHHHhhcCCCCcEEEecCCeEEE---EEE---------------------------
Q 042417 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS---IRF--------------------------- 50 (249)
Q Consensus 1 ~~~v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~~---i~~--------------------------- 50 (249)
++||+||||+|||.+|||+|||+||+ + |++|+||+|+|+. |.|
T Consensus 22 ~~nV~dfGA~gDG~tDdT~Aiq~Ai~-~------Gg~V~iP~GtYlis~~l~l~snv~L~g~g~~~t~L~~~~~~p~~~~ 94 (609)
T 3gq8_A 22 GVSVKTYGAKGDGVTDDIRAFEKAIE-S------GFPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIRFMDSVGRGES 94 (609)
T ss_dssp SEEGGGGTCCCEEEEECHHHHHHHHH-T------SSCEEECSEEEEESSCEEECSSEEEEESCTTTEEEEECTTCCSSCC
T ss_pred EEEeEecccCCCCCchhHHHHHHHHH-c------CCEEEECCccEEEeCceEECCCcEEEEeeCCCCEEEeCCCCCCCCc
Confidence 48999999999999999999999995 2 3599999999981 111
Q ss_pred --------EecCCCceeceeEeccc--------------CeEEEEEceeeEEEEeeEEecCCC------CC-CCcceEec
Q 042417 51 --------NFLNDSTITGIKSVDSR--------------YFHINILGCYNLKLNDLKITAHAD------SP-NTEGIHIG 101 (249)
Q Consensus 51 --------~~~~nv~i~gi~i~ns~--------------~~~i~~~~s~nv~I~n~~i~~~~~------~~-n~DGi~~~ 101 (249)
.+.+|+.|+|.+|.... -..+.+..|+|++|+++++..... ++ ..||++++
T Consensus 95 li~~lI~a~~~~NItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~D 174 (609)
T 3gq8_A 95 LMYNENVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGD 174 (609)
T ss_dssp SEEESCTTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCT
T ss_pred eeeeeeeecccccEEEEeeEEECCccccCcccccCCCCCccEEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCC
Confidence 12345566666554311 123778999999999999965421 11 12888888
Q ss_pred C------cccEEEEeeEE-ecCCCeeEe---------------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 102 S------SNGSEISHSVI-ATGDDCVSL---------------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 102 ~------s~nv~I~n~~i-~~gDD~i~i---------------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
+ |+||+|+||++ .++||||++ +|||+||+. .+||+|+||+|.++
T Consensus 175 Gi~fd~~S~NV~I~Nc~I~~tGDDcIaIksseNI~I~Nc~~~gp~G~S~~~GIsIGsg--------s~NVtV~Nc~i~nt 246 (609)
T 3gq8_A 175 GTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDG--------SRHVVLSNNRSKGC 246 (609)
T ss_dssp TCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEECCSSCSSCCSEEECTT--------CEEEEEESEEEESS
T ss_pred CccccccceeEEEEeeEEEecCCCEEEecCCeeEEEEeEEEECCCCCCCcccEEccCC--------cccEEEEeeEEECC
Confidence 8 99999999999 559999999 256777643 39999999999998
No 16
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=99.92 E-value=5.8e-24 Score=203.16 Aligned_cols=138 Identities=22% Similarity=0.290 Sum_probs=105.4
Q ss_pred CeeeeecCccCCCccchHHHHHHHHHHHhhcCCCCcEEEecCCeEEE---E------------------EE---------
Q 042417 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYLS---I------------------RF--------- 50 (249)
Q Consensus 1 ~~~v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~~---i------------------~~--------- 50 (249)
++||+||||+|||.+|||+|||+||+ + |++|+||+|+|+. | .+
T Consensus 22 ~~nV~dfGA~gDG~tDdT~Aiq~Ai~-a------Gg~V~IPaGtYlisg~I~L~snv~L~Geg~~~t~Lk~~~d~p~~~~ 94 (772)
T 3gqn_A 22 GVSVKTYGAKGDGVTDDIRAFEKAIE-S------GFPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIRFMDSVGRGES 94 (772)
T ss_dssp SEESGGGTCCCEEEEECHHHHHHHHH-T------TSCEEECSEEEEESSCEEECSSCEEEEEEEEEEEEEECTTCCSSCC
T ss_pred EEEeEecccCCCCChhHHHHHHHHHH-c------CCEEEECCccEEEEeEEEECCCcEEEEecCCCCEEEeCCCCCCCCc
Confidence 58999999999999999999999995 2 3599999999981 1 11
Q ss_pred --------EecCCCceeceeEeccc--------------CeEEEEEceeeEEEEeeEEecCCC------CC-CCcceEec
Q 042417 51 --------NFLNDSTITGIKSVDSR--------------YFHINILGCYNLKLNDLKITAHAD------SP-NTEGIHIG 101 (249)
Q Consensus 51 --------~~~~nv~i~gi~i~ns~--------------~~~i~~~~s~nv~I~n~~i~~~~~------~~-n~DGi~~~ 101 (249)
.+++|+.|+|.+|.... -..+.+..|+|++|+++++..... ++ ..||++++
T Consensus 95 li~~lI~a~gveNItItG~TIDGNG~~~g~~~~~~g~~RP~lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~D 174 (772)
T 3gqn_A 95 LMYNENVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGD 174 (772)
T ss_dssp SEEESCTTTCCEEEEEEEEEEECCGGGGCSSCCCSSTTTTCSEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCT
T ss_pred eeeeeeeccCceeEEEEeeEEeCCccccCcccccCCCCCccEEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCc
Confidence 12345556666554311 123788999999999999965421 11 13888888
Q ss_pred C------cccEEEEeeEEe-cCCCeeEe---------------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 102 S------SNGSEISHSVIA-TGDDCVSL---------------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 102 ~------s~nv~I~n~~i~-~gDD~i~i---------------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
+ |+||+|+||+|+ +|||||++ +|||+||+. .+||+|+||+|.++
T Consensus 175 Gi~fdi~S~NV~I~Nc~I~ntGDDcIAIksSeNI~I~Nc~c~gphG~S~~~GIsIGsg--------s~NVtV~Nc~~~nT 246 (772)
T 3gqn_A 175 GTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDG--------SRHVVLSNNRSKGC 246 (772)
T ss_dssp TCCCSSCCEEEEEESCEEESCSSCSEEECSCEEEEEESCEEECCSSSSSCCSEEECTT--------CEEEEEEEEEEESS
T ss_pred CcccccccceEEEEeeEEEecCcCeEEecCCceEEEEeEEEECCCCCCCcccEEecCC--------cccEEEEceEEECC
Confidence 8 999999999994 59999999 156777642 39999999999998
No 17
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=99.91 E-value=4.8e-24 Score=201.42 Aligned_cols=94 Identities=16% Similarity=0.177 Sum_probs=84.4
Q ss_pred ecCCCceeceeEecccCeEEEEEceeeE--EEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCCeeEe-------
Q 042417 52 FLNDSTITGIKSVDSRYFHINILGCYNL--KLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCVSL------- 122 (249)
Q Consensus 52 ~~~nv~i~gi~i~ns~~~~i~~~~s~nv--~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i~i------- 122 (249)
+|+|++|+|++++|+|+|++++..|+|| +|+|+++.++. ..++||||+. +||+|+||+|.+|||||+|
T Consensus 331 ~c~NV~I~Giti~NSp~w~i~~~~c~nV~~~I~nv~i~~~~-~~nTDGIDi~--~NV~I~nc~I~~gDDcIaIks~NI~I 407 (574)
T 1ogo_X 331 GGQTWYCVGPTINAPPFNTMDFNGNSGISSQISDYKQVGAF-FFQTDGPEIY--PNSVVHDVFWHVNDDAIKIYYSGASV 407 (574)
T ss_dssp SSEEEEEESCEEECCSSCSEEECSSSCEEEEEEEEEEECCC-STTCCCCBCC--TTCEEEEEEEEESSCSEECCSTTCEE
T ss_pred CceeEEEECeEEECCCCcEEeecCCCChhhEEEeeEeeCCC-CCCCccCccc--CCEEEEeeEEECCCCEEEECCccEEE
Confidence 7899999999999999999999999999 99999988632 3469999999 9999999999999999999
Q ss_pred ---------Ccc-eEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 123 ---------GHG-ISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 123 ---------g~G-i~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
||| |++||. .+.|+||+|+||+|.++
T Consensus 408 ~nc~i~~g~g~g~IsIGS~-----~g~V~NV~v~N~~i~~~ 443 (574)
T 1ogo_X 408 SRATIWKCHNDPIIQMGWT-----SRDISGVTIDTLNVIHT 443 (574)
T ss_dssp EEEEEEECSSSCSEECCSS-----CCCEEEEEEEEEEEEEC
T ss_pred EeEEEECCCCCceEEEcCC-----CCcEEEEEEEeEEEECC
Confidence 456 899984 47899999999999653
No 18
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=99.82 E-value=5.4e-20 Score=175.91 Aligned_cols=179 Identities=20% Similarity=0.228 Sum_probs=113.0
Q ss_pred eeeeecCccCCCccchHHHHHHHHHHHhhcCCCC---------cEEEecCCeEE---EEEEE----------------ec
Q 042417 2 FNVKDFGAVADGIKDDSKAFETAWREACNWDGIK---------SAVLVPPGKYL---SIRFN----------------FL 53 (249)
Q Consensus 2 ~~v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~g~g---------~~v~iP~G~y~---~i~~~----------------~~ 53 (249)
+||+||||+|||++|||+|||+||+ ++++.| + ++||||+|+|+ .|.+. .+
T Consensus 50 ~nV~dfGA~GDG~tDDT~Aiq~Ai~-~a~~~G-ggc~~st~~~~~V~~P~GtYlvs~tI~l~~~t~L~G~~~~~pvIka~ 127 (758)
T 3eqn_A 50 RNVKNYGAKGDGNTDDTAAIQAAIN-AGGRCG-QGCDSTTTQPALVYFPPGTYKVSSPLVVLYQTQLIGDAKNLPTLLAA 127 (758)
T ss_dssp EEGGGGTCCCEEEEECHHHHHHHHH-TTSCSC-TTCCCCSSSCEEEEECSSEEEESSCEECCTTEEEEECSSSCCEEEEC
T ss_pred EEHHHcCcCCCCCchhHHHHHHHHH-Hhhhcc-cccccccccceEEEECCceEEEcccEEccCCeEEEecCCCCCeEecC
Confidence 6899999999999999999999995 444333 2 69999999998 11110 01
Q ss_pred CC---------------------------CceeceeEe----cccCeEEEEEceeeEEEEeeEEecCCCCC-CCcceEec
Q 042417 54 ND---------------------------STITGIKSV----DSRYFHINILGCYNLKLNDLKITAHADSP-NTEGIHIG 101 (249)
Q Consensus 54 ~n---------------------------v~i~gi~i~----ns~~~~i~~~~s~nv~I~n~~i~~~~~~~-n~DGi~~~ 101 (249)
.+ ..|+++.|. +++.++|+...+++..|+||.|..+..+. ..+||+++
T Consensus 128 ~~F~G~~li~~d~y~~~G~~w~~~~~~F~r~irNlviD~t~~~~~~~gIhw~vaQatsL~Nv~i~m~~~sg~~~~GI~~e 207 (758)
T 3eqn_A 128 PNFSGIALIDADPYLAGGAQYYVNQNNFFRSVRNFVIDLRQVSGSATGIHWQVSQATSLINIVFQMSTAAGNQHQGIFME 207 (758)
T ss_dssp TTCCSSCSEESSCBCGGGCBSSCGGGCCCEEEEEEEEECTTCSSCEEEEECCCCSSEEEEEEEEECCCSTTCCEEEEEEC
T ss_pred CCCCCcceeeccccCCCCccccccccceeeeecceEEeccccCCCceEEEEEecCceEEEEEEEEecCCCCCcceeEEec
Confidence 11 112333332 22236677777777888888887765543 37788887
Q ss_pred CcccEEEEeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEcc----------ceEEecCCccEEEEeeeC
Q 042417 102 SSNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------NIVTNNVENPIVIDQLYC 171 (249)
Q Consensus 102 ~s~nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~----------nI~~~nv~~~i~i~~~y~ 171 (249)
.+....|+|++|..|+ -|+.+|.. ...++|++|+||..-=- +++|+|+..+|.+...+.
T Consensus 208 ~GSgg~i~Dl~f~GG~------~G~~~gnQ-----QfT~rnltF~~~~taI~~~w~wgwt~~~~~i~nc~vGi~~~~g~~ 276 (758)
T 3eqn_A 208 NGSGGFLGDLVFNGGN------IGATFGNQ-----QFTVRNLTFNNANTAINAIWNWGWTFQRITINNCQVGFDLTQGGT 276 (758)
T ss_dssp SCCCCEEEEEEEESCS------EEEEEECS-----CCEEEEEEEESCSEEEEEEEBSCEEEEEEEEESCSEEEEECCCCS
T ss_pred CCCceEEEeeEEeCCc------eEEEcCCc-----ceEEeccEEeChHHHHhhhcCceEEEEEeEEECCCccEEEcCCCC
Confidence 7777788888887765 45555442 24567777777643100 888888888887765332
Q ss_pred CCCCCCcCCCCceeEEeEEEEeEE
Q 042417 172 PYNKCNIKVPSQVKTSNVRFNNIR 195 (249)
Q Consensus 172 ~~~~~~~~~~~~~~i~nI~~~ni~ 195 (249)
..+. . .....+.|.|-+|+|+.
T Consensus 277 ~~~~-~-q~vGsv~l~Ds~~~n~~ 298 (758)
T 3eqn_A 277 SNTG-A-QGVGAEAIIDAVVTNTQ 298 (758)
T ss_dssp STTS-C-CCBCEEEEEEEEEESCS
T ss_pred Cccc-C-cceeeEEEEEeeEEccc
Confidence 1000 0 11234667777777754
No 19
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=99.81 E-value=6.7e-19 Score=158.95 Aligned_cols=44 Identities=41% Similarity=0.742 Sum_probs=39.6
Q ss_pred CeeeeecCccCCCccchHHHHHHHHHHHhhcCCCCcEEEecCCeEE
Q 042417 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL 46 (249)
Q Consensus 1 ~~~v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~ 46 (249)
++||+||||+|||.+|||+|||+||++|++ .| +++|+||+|+|+
T Consensus 2 ~~~v~~~ga~~dg~~ddt~aiq~Ai~~a~~-~g-g~~v~~p~G~y~ 45 (377)
T 2pyg_A 2 DYNVKDFGALGDGVSDDRASIQAAIDAAYA-AG-GGTVYLPAGEYR 45 (377)
T ss_dssp CEEGGGGTCCCEEEEECHHHHHHHHHHHHH-TT-SEEEEECSEEEE
T ss_pred EeeeeecCCCCCCCcchHHHHHHHHHHHHh-cC-CCEEEECCeEEE
Confidence 589999999999999999999999976654 46 789999999996
No 20
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=99.65 E-value=1.6e-15 Score=139.95 Aligned_cols=156 Identities=8% Similarity=0.101 Sum_probs=117.6
Q ss_pred EEEEEecCCCceeceeEecc--cCeEEEEEceeeEEEEeeEEecCCC------CCCCcceEecC-cccEEEEeeEE--ec
Q 042417 47 SIRFNFLNDSTITGIKSVDS--RYFHINILGCYNLKLNDLKITAHAD------SPNTEGIHIGS-SNGSEISHSVI--AT 115 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns--~~~~i~~~~s~nv~I~n~~i~~~~~------~~n~DGi~~~~-s~nv~I~n~~i--~~ 115 (249)
.+++.+|+|++|++++|.++ ...++++..|+||+|+|++|++.++ .++.||+++.. |+||+|+||++ ..
T Consensus 215 ~i~~~~~~nv~i~~v~I~~~~~NtDGidi~~s~nV~I~n~~i~~gDDcIaiksg~~~dg~~~~~ps~nI~I~n~~~~~~~ 294 (448)
T 3jur_A 215 CIHPVLSENVIIRNIEISSTGPNNDGIDPESCKYMLIEKCRFDTGDDSVVIKSGRDADGRRIGVPSEYILVRDNLVISQA 294 (448)
T ss_dssp SEEEESCEEEEEESCEEEECSTTCCSBCCBSCEEEEEESCEEEESSEEEEEBCCCHHHHHHHCCCEEEEEEESCEEECSS
T ss_pred eEeeeccCCEEEEeEEEeeccCCCccccccCCcCEEEEeeEEEeCCCcEEeccCccccccccCCCceeEEEEEeEEecCC
Confidence 68888999999999999985 2456899999999999999998542 12334444332 79999999999 55
Q ss_pred CCCeeEe---------------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc---------------------
Q 042417 116 GDDCVSL---------------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT--------------------- 153 (249)
Q Consensus 116 gDD~i~i---------------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~--------------------- 153 (249)
|+.+|++ .+|+.|++...+ .+.|+||+|+|++|.+.
T Consensus 295 gh~gisiGS~~~~~v~nV~v~n~~~~~t~~GirIKt~~g~--gG~v~nI~f~ni~m~~v~~~~i~I~~~Y~~~~~~~~~~ 372 (448)
T 3jur_A 295 SHGGLVIGSEMSGGVRNVVARNNVYMNVERALRLKTNSRR--GGYMENIFFIDNVAVNVSEEVIRINLRYDNEEGEYLPV 372 (448)
T ss_dssp CSEEEEECSSCTTCEEEEEEESCEEESCSEEEEEECCTTT--CSEEEEEEEESCEEEEESSEEEEEESCGGGCCCSCCCE
T ss_pred CcceEEECCcccCcEEEEEEEEEEEecccceEEEEEEcCC--CceEeeEEEEEEEEECCccccEEEEeeccCCCCCCCce
Confidence 6668998 368888876433 26899999999998875
Q ss_pred --ceEEecCC-----ccEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccCC----Cc---------eecEEEEeEE
Q 042417 154 --NIVTNNVE-----NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----IP---------CQNIGIGNIN 213 (249)
Q Consensus 154 --nI~~~nv~-----~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~~----~~---------~~~i~~~nv~ 213 (249)
||+|+|+. +++.+.. .+ ..+++||+|+||+.+..+. .. +++|+|+||.
T Consensus 373 i~nI~~~NI~~t~~~~~i~i~g-----------~~-~~p~~~I~~~nv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~nv~ 440 (448)
T 3jur_A 373 VRSVFVKNLKATGGKYAVRIEG-----------LE-NDYVKDILISDTIIEGAKISVLLEFGQLGMENVIMNGSRFEKLY 440 (448)
T ss_dssp EEEEEEESCEEEECSEEEEEEC-----------BT-TBCEEEEEEEEEEEESCSEEEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEeEEEEecceEEEEEe-----------CC-CCCEeeEEEEEEEEEccccceeEeccccccccceecccEEEEEE
Confidence 66666653 2333321 12 2479999999999987654 33 8999999999
Q ss_pred EEE
Q 042417 214 WVY 216 (249)
Q Consensus 214 i~~ 216 (249)
|..
T Consensus 441 ing 443 (448)
T 3jur_A 441 IEG 443 (448)
T ss_dssp EEE
T ss_pred EcC
Confidence 974
No 21
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=99.39 E-value=5.8e-12 Score=112.40 Aligned_cols=99 Identities=11% Similarity=0.178 Sum_probs=82.5
Q ss_pred EEEEEecCCCceeceeEecccC--------eEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCC
Q 042417 47 SIRFNFLNDSTITGIKSVDSRY--------FHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDD 118 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~~--------~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD 118 (249)
.+.+.+|++++|++++|.+++. ..+++..|+||+|+|++|.. ..|+|.+.+++||+|+||++..++
T Consensus 125 ~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh- 198 (339)
T 2iq7_A 125 AFSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDVGSSTGVYISGANVKN-----QDDCLAINSGTNITFTGGTCSGGH- 198 (339)
T ss_dssp CEEEESCEEEEEESCEEECGGGGGTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSC-
T ss_pred eEEEeccCCEEEEEEEEECCccccccCCCCCcEEEcCcceEEEEecEEec-----CCCEEEEcCCccEEEEeEEEECCc-
Confidence 6888999999999999998642 35999999999999999987 468999999999999999999887
Q ss_pred eeEe------------------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 119 CVSL------------------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 119 ~i~i------------------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
+|+| .+|+.|++... ..+.++||+|+|++|.+.
T Consensus 199 GisiGSlg~~~~~~v~nV~v~n~~~~~~~~girIkt~~g--~~G~v~nI~~~ni~~~~v 255 (339)
T 2iq7_A 199 GLSIGSVGGRSDNTVKTVTISNSKIVNSDNGVRIKTVSG--ATGSVSGVTYSGITLSNI 255 (339)
T ss_dssp CEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT--CCCEEEEEEEEEEEEEEE
T ss_pred eEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCC--CCeEEEEEEEEeEEccCc
Confidence 4887 24566766422 236799999999999974
No 22
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=99.39 E-value=6.6e-12 Score=113.50 Aligned_cols=141 Identities=18% Similarity=0.214 Sum_probs=104.1
Q ss_pred EEEEEecCCCceeceeEeccc----CeEEEEEceeeEEEEeeEEecCCCCCCCcceEec------CcccEEEEeeEEecC
Q 042417 47 SIRFNFLNDSTITGIKSVDSR----YFHINILGCYNLKLNDLKITAHADSPNTEGIHIG------SSNGSEISHSVIATG 116 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~----~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~------~s~nv~I~n~~i~~g 116 (249)
.+.+.+|++++|++++|.++. ...+++.+|+||+|+|++|.+ ..|+|.+. .|+||+|+||++..+
T Consensus 176 ~i~~~~~~~v~i~~v~I~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiks~~~~~~s~nI~I~n~~~~~g 250 (376)
T 1bhe_A 176 HVVFSDGDGFTAWKTTIKTPSTARNTDGIDPMSSKNITIAYSNIAT-----GDDNVAIKAYKGRAETRNISILHNDFGTG 250 (376)
T ss_dssp SEEEESCEEEEEEEEEEECCTTCSSCCSEEEESCEEEEEESCEEEC-----SSCSEEEEECTTSCCEEEEEEEEEEECSS
T ss_pred EEEEeCCCcEEEEeEEEECCCCCCCCceEeecCCceEEEEeCEEec-----CCCeEEEcccCCCCCceEEEEEeeEEEcc
Confidence 566777999999999999853 346999999999999999997 46889888 599999999999987
Q ss_pred CCeeEe--------------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc----------------------c
Q 042417 117 DDCVSL--------------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT----------------------N 154 (249)
Q Consensus 117 DD~i~i--------------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~----------------------n 154 (249)
+. |++ ..|+.|.+... ..+.|+||+|+|++|.+. |
T Consensus 251 hG-isiGSe~~~v~nV~v~n~~~~~t~~GirIKt~~g--~~G~v~ni~f~ni~~~~v~~~i~i~~~y~~~~~~~~~~i~n 327 (376)
T 1bhe_A 251 HG-MSIGSETMGVYNVTVDDLKMNGTTNGLRIKSDKS--AAGVVNGVRYSNVVMKNVAKPIVIDTVYEKKEGSNVPDWSD 327 (376)
T ss_dssp SC-EEEEEEESSEEEEEEEEEEEESCSEEEEEECCTT--TCCEEEEEEEEEEEEESCSEEEEEETTSSCCCCCCCCEEEE
T ss_pred cc-EEeccCCccEeeEEEEeeEEeCCCcEEEEEEecC--CCceEeeEEEEeEEEeCCCceEEEEeeccCCCCCcCcEEEE
Confidence 64 777 34677776422 236799999999999997 6
Q ss_pred eEEecCC----ccEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccCCCceecE
Q 042417 155 IVTNNVE----NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANKIPCQNI 207 (249)
Q Consensus 155 I~~~nv~----~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~~~~~~~i 207 (249)
|+|+|+. .++.+. + .+ ..++++|+|+||..+......|+++
T Consensus 328 i~~~ni~gt~~~~~~l~---g--------~~-~~~~~~I~l~nv~l~~~~~~~~~~~ 372 (376)
T 1bhe_A 328 ITFKDVTSETKGVVVLN---G--------EN-AKKPIEVTMKNVKLTSDSTWQIKNV 372 (376)
T ss_dssp EEEEEEEECSCCEEEEE---C--------TT-CSSCEEEEEEEEECCTTCEEEEESE
T ss_pred EEEEEEEEEecceEEEE---e--------CC-CCCeeeEEEEeEEEecCCCceEEEE
Confidence 6666653 122222 1 11 2346899999999887643334433
No 23
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=99.38 E-value=3.2e-12 Score=122.16 Aligned_cols=158 Identities=11% Similarity=0.057 Sum_probs=117.1
Q ss_pred EEecCCCceeceeEec--cc-CeEEEEEceeeEEEEeeEEecCCC------CCCCcceEecCcccEEEEeeEEecCCCee
Q 042417 50 FNFLNDSTITGIKSVD--SR-YFHINILGCYNLKLNDLKITAHAD------SPNTEGIHIGSSNGSEISHSVIATGDDCV 120 (249)
Q Consensus 50 ~~~~~nv~i~gi~i~n--s~-~~~i~~~~s~nv~I~n~~i~~~~~------~~n~DGi~~~~s~nv~I~n~~i~~gDD~i 120 (249)
+.+|+|++|+++++.+ ++ ..++++.+|+||+|+|++|.+.++ +++.||++...|+||+|+||++..+++++
T Consensus 359 ~~~~~nv~i~~v~i~~~~~~NtDGidi~~s~nV~I~n~~i~~gDD~Iaiksg~~~~g~~~~~s~nI~I~n~~~~~ghg~~ 438 (608)
T 2uvf_A 359 NLENHNVVANGLIHQTYDANNGDGIEFGNSQNVMVFNNFFDTGDDCINFAAGTGEKAQEQEPMKGAWLFNNYFRMGHGAI 438 (608)
T ss_dssp EESCEEEEEESCEEECTTCTTCCSEEEESCEEEEEESCEEECSSCSEEEECCCSGGGGGSCCEEEEEEESCEECSSSCSE
T ss_pred EecCCCEEEeeEEEcCCCCCCCCeEEecCCceEEEEeeEEecCCceEEecCCcCccccccccccCEEEEeEEEeCCCCeE
Confidence 3467899999999865 22 356999999999999999998654 24667777667899999999999999988
Q ss_pred Ee---------------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc---ce---------------------
Q 042417 121 SL---------------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT---NI--------------------- 155 (249)
Q Consensus 121 ~i---------------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~---nI--------------------- 155 (249)
++ .+|+.|++...++ +.|+||+|+|++|.+. -|
T Consensus 439 ~iGS~~~~~v~nI~v~n~~~~~t~~GirIKt~~g~g--G~v~nI~~~ni~m~~v~~~~i~I~~~y~~~~~~~~~~~~~~~ 516 (608)
T 2uvf_A 439 VTGSHTGAWIEDILAENNVMYLTDIGLRAKSTSTIG--GGARNVTFRNNAMRDLAKQVMVMTLDYADSNANIDYPPAKIP 516 (608)
T ss_dssp EEESCCTTCEEEEEEESCEEESCSEEEEEEEETTTC--CEEEEEEEEEEEEEEESSEEEEEEEECCCCSCCCSSCCCSSC
T ss_pred EEcccCCCCEEEEEEEeEEEECCCceEEEeeecCCC--ceEECcEEEeeEEEccccccEEEEeccCCCCcccccCCcCCC
Confidence 76 3688888764332 5799999999999975 12
Q ss_pred ------EEecC-----C---ccEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccCC---CceecEEEEeEEEEEcC
Q 042417 156 ------VTNNV-----E---NPIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK---IPCQNIGIGNINWVYNG 218 (249)
Q Consensus 156 ------~~~nv-----~---~~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~~---~~~~~i~~~nv~i~~~~ 218 (249)
+++|+ . .++.|.. ...+..+++||+|+||+++.... ..|++++|+||.|....
T Consensus 517 ~~~~~V~i~nI~~~n~~gt~~~i~i~g----------~~~~~~p~~ni~~~nv~i~~~~~~~i~~~~~~~~~nv~i~~~~ 586 (608)
T 2uvf_A 517 AQFYDFTLKNVTVDNSTGKNPSIEIKG----------DTANKAWHRLVHVNNVQLNNVTPTAISDLRDSEFNKVTFTELR 586 (608)
T ss_dssp CEEEEEEEEEEEEEEECSSSCSEEEEC----------BGGGTBCEEEEEEEEEEEESCCCCEEESEESCEEEEEEEESCS
T ss_pred CccccEEEEeEEEEeeeceEEeEEEEE----------EcCCCCccccEEEEeEEEEccCceeEEeccCceEEeEEEeCCC
Confidence 22222 1 0111110 01123479999999999998765 67999999999999766
Q ss_pred c
Q 042417 219 V 219 (249)
Q Consensus 219 g 219 (249)
+
T Consensus 587 ~ 587 (608)
T 2uvf_A 587 G 587 (608)
T ss_dssp S
T ss_pred C
Confidence 4
No 24
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=99.37 E-value=8.9e-12 Score=111.61 Aligned_cols=99 Identities=14% Similarity=0.170 Sum_probs=82.6
Q ss_pred EEEEEecCCCceeceeEeccc----------------CeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEe
Q 042417 47 SIRFNFLNDSTITGIKSVDSR----------------YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISH 110 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~----------------~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n 110 (249)
.+.+.+|++++|++++|.+++ ...+++..|+||+|+|++|.+ ..|+|.+.+++||+|+|
T Consensus 129 ~i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n 203 (349)
T 1hg8_A 129 CFDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDISSSDHVTLDNNHVYN-----QDDCVAVTSGTNIVVSN 203 (349)
T ss_dssp EEEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEEESCEEEEEEEEEEEC-----SSCSEEESSEEEEEEEE
T ss_pred eEEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEEccccEEEEEeeEEec-----CCCeEEeeCCeEEEEEe
Confidence 789999999999999999853 234999999999999999997 46899999999999999
Q ss_pred eEEecCCCeeEe------------------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 111 SVIATGDDCVSL------------------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 111 ~~i~~gDD~i~i------------------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
|++..++ +|+| .+|+.|.+... ..+.|+||+|+|++|.+.
T Consensus 204 ~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g--~~G~v~nI~~~ni~~~~v 267 (349)
T 1hg8_A 204 MYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSG--ATGTINNVTYQNIALTNI 267 (349)
T ss_dssp EEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT--CCEEEEEEEEEEEEEEEE
T ss_pred EEEeCCc-ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCC--CCccccceEEEEEEEEcc
Confidence 9999887 4877 23566666422 236799999999999875
No 25
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=99.33 E-value=2.2e-11 Score=108.58 Aligned_cols=99 Identities=13% Similarity=0.128 Sum_probs=81.6
Q ss_pred EEEEEecCCCceeceeEeccc--------CeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCC
Q 042417 47 SIRFNFLNDSTITGIKSVDSR--------YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDD 118 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~--------~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD 118 (249)
.|.+.+|++++|++++|.+++ ...+++..|+||+|+|++|.. ..|+|.+.+++||+|+||++..++
T Consensus 129 ~i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~gh- 202 (339)
T 1ia5_A 129 VFSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDIGTSTYVTISGATVYN-----QDDCVAVNSGENIYFSGGYCSGGH- 202 (339)
T ss_dssp CEEEESCEEEEEESCEEECGGGTTTTCCSCCSEEEESCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSS-
T ss_pred eEEEecccCeEEeeEEEECCccccccCCCCCcEEecCCceEEEEeeEEEc-----CCCeEEEeCCeEEEEEeEEEECCc-
Confidence 688899999999999999853 245999999999999999987 468999999999999999999887
Q ss_pred eeEe------------------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 119 CVSL------------------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 119 ~i~i------------------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
+|++ .+|+.|.+... ..+.++||+|+|++|.+.
T Consensus 203 GisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIKt~~g--~~G~v~nI~~~ni~~~~v 259 (339)
T 1ia5_A 203 GLSIGSVGGRSDNTVKNVTFVDSTIINSDNGVRIKTNID--TTGSVSDVTYKDITLTSI 259 (339)
T ss_dssp CEEEEEECSSSCCEEEEEEEEEEEEESCSEEEEEEEETT--CCCEEEEEEEEEEEEEEE
T ss_pred eEEECcCCcccCCCEEEEEEEeeEEECCCcEEEEEEeCC--CCcEEEeeEEEEEEEECc
Confidence 4777 23566665422 236799999999999964
No 26
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.30 E-value=3.2e-11 Score=107.46 Aligned_cols=98 Identities=15% Similarity=0.264 Sum_probs=80.9
Q ss_pred EEEEEecCCCceeceeEeccc--------CeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCC
Q 042417 47 SIRFNFLNDSTITGIKSVDSR--------YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDD 118 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~--------~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD 118 (249)
.+.+. |++++|++++|.+++ ...+++..|+||+|+|++|.. ..|+|.+.+++||+|+||++..++
T Consensus 125 ~i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi~~s~nV~I~n~~i~~-----gDDciaiksg~nI~i~n~~~~~gh- 197 (336)
T 1nhc_A 125 AISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDISESTGVYISGATVKN-----QDDCIAINSGESISFTGGTCSGGH- 197 (336)
T ss_dssp CEEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEECSCEEEEEESCEEES-----SSEEEEESSEEEEEEESCEEESSS-
T ss_pred EEEEE-eCCEEEEEEEEECCCcccccCCCCCcEEecCCCeEEEEeCEEEc-----CCCEEEEeCCeEEEEEeEEEECCc-
Confidence 68888 999999999999863 345999999999999999987 468999999999999999999887
Q ss_pred eeEeC------------------------cceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 119 CVSLG------------------------HGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 119 ~i~ig------------------------~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
+|+|| +|+.|.+... ..+.++||+|+|++|.+.
T Consensus 198 GisiGS~g~~~~~~v~nV~v~n~~~~~t~~girIkt~~g--~~G~v~nI~~~ni~~~~v 254 (336)
T 1nhc_A 198 GLSIGSVGGRDDNTVKNVTISDSTVSNSANGVRIKTIYK--ETGDVSEITYSNIQLSGI 254 (336)
T ss_dssp EEEEEEESSSSCCEEEEEEEEEEEEESCSEEEEEEEETT--CCCEEEEEEEEEEEEEEE
T ss_pred CceEccCccccCCCEEEEEEEeeEEECCCcEEEEEEECC--CCCEEeeeEEeeEEeecc
Confidence 48872 3555665321 236799999999999885
No 27
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=99.28 E-value=8.3e-11 Score=107.79 Aligned_cols=97 Identities=14% Similarity=0.186 Sum_probs=79.8
Q ss_pred EEEEEecCCCceeceeEecc---cCeEEEEEceeeEEEEeeEEecCCCCCCCcceEecC-cccEEEEeeEEecCCCeeEe
Q 042417 47 SIRFNFLNDSTITGIKSVDS---RYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGS-SNGSEISHSVIATGDDCVSL 122 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns---~~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~-s~nv~I~n~~i~~gDD~i~i 122 (249)
.|.+..|+|++|++++|.+. ....+++.. +||+|+|+.|.. ..|+|.+.+ ++||+|+||++..++ +|+|
T Consensus 152 ~i~i~~~~nv~I~n~~I~~~d~~ntDGidi~~-~nV~I~n~~i~~-----gDD~Iai~s~~~nI~I~n~~~~~~~-GisI 224 (422)
T 1rmg_A 152 HFTMDTCSDGEVYNMAIRGGNEGGLDGIDVWG-SNIWVHDVEVTN-----KDECVTVKSPANNILVESIYCNWSG-GCAM 224 (422)
T ss_dssp SEEEEEEEEEEEEEEEEECCSSTTCCSEEEEE-EEEEEEEEEEES-----SSEEEEEEEEEEEEEEEEEEEESSS-EEEE
T ss_pred EEEEeCcCCEEEEeEEEECCCCCCCccEeecC-CeEEEEeeEEeC-----CCCeEEeCCCCcCEEEEeEEEcCCc-ceee
Confidence 68888999999999999972 245688888 999999999987 468999987 999999999988765 7776
Q ss_pred ----------------------CcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 123 ----------------------GHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 123 ----------------------g~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
.+|+.|.+.+ ..+.++||+|+|++|.+.
T Consensus 225 GS~g~~~~v~nV~v~n~~~~~~~~Gi~Ikt~~---g~G~v~nI~~~NI~~~~v 274 (422)
T 1rmg_A 225 GSLGADTDVTDIVYRNVYTWSSNQMYMIKSNG---GSGTVSNVLLENFIGHGN 274 (422)
T ss_dssp EEECTTEEEEEEEEEEEEEESSSCSEEEEEBB---CCEEEEEEEEEEEEEEEE
T ss_pred cccCCCCcEEEEEEEeEEEeccceEEEEEecC---CCcEEEEEEEEeEEEECc
Confidence 3466676642 235799999999999876
No 28
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=99.26 E-value=9.2e-11 Score=105.46 Aligned_cols=98 Identities=12% Similarity=0.203 Sum_probs=80.1
Q ss_pred EEEEEecCCCceeceeEeccc--------CeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCC
Q 042417 47 SIRFNFLNDSTITGIKSVDSR--------YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDD 118 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~--------~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD 118 (249)
.+.+. |+|++|++++|.+++ ...+++..|+||+|+|++|.+ ..|+|.+.+++||+|+||++..++
T Consensus 151 ~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi~~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~gh- 223 (362)
T 1czf_A 151 AFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDVGNSVGVNIIKPWVHN-----QDDCLAVNSGENIWFTGGTCIGGH- 223 (362)
T ss_dssp CEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEECSCEEEEEESCEEEC-----SSCSEEESSEEEEEEESCEEESSC-
T ss_pred EEEEe-eCCEEEEEEEEECCccccccCCCCCceeecCcceEEEEeeEEec-----CCCEEEEeCCeEEEEEEEEEeCCc-
Confidence 68889 999999999999853 245999999999999999998 468999999999999999999877
Q ss_pred eeEeC------------------------cceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 119 CVSLG------------------------HGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 119 ~i~ig------------------------~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
+|+|| .|+.|.+... ..+.|+||+|+|++|.+.
T Consensus 224 GisiGS~G~~~~~~v~nV~v~n~~~~~t~~GirIKt~~g--~~G~v~nI~~~ni~~~~v 280 (362)
T 1czf_A 224 GLSIGSVGDRSNNVVKNVTIEHSTVSNSENAVRIKTISG--ATGSVSEITYSNIVMSGI 280 (362)
T ss_dssp CEEEEEECSSSCCEEEEEEEEEEEEEEEEEEEEEEEETT--CCEEEEEEEEEEEEEEEE
T ss_pred eeEEeeccccCCCCEEEEEEEeeEEECCceEEEEEEeCC--CCceEeeEEEEeEEEECc
Confidence 47772 2455555321 236799999999999875
No 29
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=99.25 E-value=7.6e-11 Score=104.94 Aligned_cols=98 Identities=17% Similarity=0.253 Sum_probs=80.2
Q ss_pred EEEEEecCC-CceeceeEeccc---------CeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecC
Q 042417 47 SIRFNFLND-STITGIKSVDSR---------YFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATG 116 (249)
Q Consensus 47 ~i~~~~~~n-v~i~gi~i~ns~---------~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~g 116 (249)
.+.+..|+| ++|++++|.++. ...+++ .|+||+|+|+.|.+ ..|+|.+.+++||+|+||++..+
T Consensus 121 ~i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi-~s~nV~I~n~~i~~-----gDDcIaiksg~nI~i~n~~~~~g 194 (335)
T 1k5c_A 121 AISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV-SANNVTIQNCIVKN-----QDDCIAINDGNNIRFENNQCSGG 194 (335)
T ss_dssp CEEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE-ECSSEEEESCEEES-----SSCSEEEEEEEEEEEESCEEESS
T ss_pred eEEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc-cCCeEEEEeeEEEc-----CCCEEEeeCCeeEEEEEEEEECC
Confidence 688999999 999999999863 134889 99999999999998 46899999889999999999988
Q ss_pred CCeeEe----------------------CcceEEccCCCCCCC-CceEeEEEEeeEEEcc
Q 042417 117 DDCVSL----------------------GHGISVGSLGKGIND-EEVVGLTVRNCTFTGT 153 (249)
Q Consensus 117 DD~i~i----------------------g~Gi~iGs~g~~~~~-~~v~ni~v~n~~~~~~ 153 (249)
+ +|+| ..|+.|.+... .. +.|+||+|+|++|.+.
T Consensus 195 h-GisIGS~g~~~~v~nV~v~n~~~~~t~~girIKt~~g--~~~G~v~nI~f~ni~~~~v 251 (335)
T 1k5c_A 195 H-GISIGSIATGKHVSNVVIKGNTVTRSMYGVRIKAQRT--ATSASVSGVTYDANTISGI 251 (335)
T ss_dssp C-CEEEEEECTTCEEEEEEEESCEEEEEEEEEEEEEETT--CCSCEEEEEEEESCEEEEE
T ss_pred c-cCeEeeccCCCCEEEEEEEeeEEECCCceEEEEEeCC--CCcceEeeeEEEEEEEEcc
Confidence 6 4877 23556665422 23 5799999999999874
No 30
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=99.12 E-value=6.7e-10 Score=102.66 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=28.4
Q ss_pred EceeeEEEEee----EEecCCCCC-CCcceEecCcccEEEEeeEEec
Q 042417 74 LGCYNLKLNDL----KITAHADSP-NTEGIHIGSSNGSEISHSVIAT 115 (249)
Q Consensus 74 ~~s~nv~I~n~----~i~~~~~~~-n~DGi~~~~s~nv~I~n~~i~~ 115 (249)
...+|++|.+- .|++....+ .--.|.+..|+|++|++.++.+
T Consensus 106 ~~~~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n 152 (464)
T 1h80_A 106 NIVRNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDD 152 (464)
T ss_dssp SCEEEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEEC
T ss_pred cCccceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEec
Confidence 45778888776 566532211 1224677889999999999876
No 31
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=99.03 E-value=1.6e-09 Score=97.44 Aligned_cols=45 Identities=16% Similarity=0.310 Sum_probs=39.0
Q ss_pred Ceeeeec----CccCCCccchHHHHHHHHHHHhh------cCCCCcEEEecCCeEE
Q 042417 1 VFNVKDF----GAVADGIKDDSKAFETAWREACN------WDGIKSAVLVPPGKYL 46 (249)
Q Consensus 1 ~~~v~df----GA~gdg~~ddt~Aiq~Ai~~a~~------~~g~g~~v~iP~G~y~ 46 (249)
+|||++| +|+|++++|++++|+++|+++.+ +.. |++|++|+|+|.
T Consensus 14 ~~~vt~~~~~~~~~~~~~~d~~~~i~~~ia~~~~~~~~~~A~p-GdvI~L~~G~Y~ 68 (410)
T 2inu_A 14 TYDVTTWRIKAHPEVTAQSDIGAVINDIIADIKQRQTSPDARP-GAAIIIPPGDYD 68 (410)
T ss_dssp EEETTTCCBTTBTTCCHHHHHHHHHHHHHHHHHHHCCCTTSCC-CEEEECCSEEEE
T ss_pred eEEEEEecccCCCcCCCchhHHHHHHHHHHHhhcccccccCCC-CCEEEECCCeec
Confidence 4899999 89999999999999999977653 233 789999999994
No 32
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=99.00 E-value=4.8e-09 Score=99.00 Aligned_cols=155 Identities=16% Similarity=0.177 Sum_probs=106.0
Q ss_pred EEEEEecCCCceeceeEecccCeEEEEEc-----------------eeeEEEEeeEEecCCCCCCCcceEecCcccEEEE
Q 042417 47 SIRFNFLNDSTITGIKSVDSRYFHINILG-----------------CYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~~~~i~~~~-----------------s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~ 109 (249)
+|.|.+|+|++|++++++|+|++++.+.. |+||+|+|++|... ..|+|.+.+|+||+|+
T Consensus 136 lI~f~~c~NV~I~gVti~NSp~~gI~I~~~~~NDGid~DGi~fd~~S~NV~I~Nc~I~~t----GDDcIaIksseNI~I~ 211 (609)
T 3gq8_A 136 NLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINIL 211 (609)
T ss_dssp SEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEE
T ss_pred EEEEEeeceEEEEeeEEEeCCCCCeEEeCCCCCccccCCCccccccceeEEEEeeEEEec----CCCEEEecCCeeEEEE
Confidence 68999999999999999999999887753 89999999999642 4699999999999999
Q ss_pred eeEEecC-----CCeeEeCcceEEccCCCCCCCCceEeEEEEee----EEE--cc-----ceEEecC---CccEEEEeee
Q 042417 110 HSVIATG-----DDCVSLGHGISVGSLGKGINDEEVVGLTVRNC----TFT--GT-----NIVTNNV---ENPIVIDQLY 170 (249)
Q Consensus 110 n~~i~~g-----DD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~----~~~--~~-----nI~~~nv---~~~i~i~~~y 170 (249)
||++... ..+|.++.|. .. -.|+|.++.++ .+. .. ||++.|. ......+..+
T Consensus 212 Nc~~~gp~G~S~~~GIsIGsgs---~N------VtV~Nc~i~nt~~GIrIKt~~~~~~v~NV~I~n~vs~~nvrsyn~r~ 282 (609)
T 3gq8_A 212 NCYSHDPRLTANCNGFEIDDGS---RH------VVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRH 282 (609)
T ss_dssp SCEEECCSSCSSCCSEEECTTC---EE------EEEESEEEESSSEEEEEEECTTSCCCEEEEEEEEEEESCSEEEEEEE
T ss_pred eEEEECCCCCCCcccEEccCCc---cc------EEEEeeEEECCCCEEEEEecCCCCccccEEEECCEeecCceEecceE
Confidence 9999544 4689987653 11 13555555552 222 11 6666552 1111122111
Q ss_pred CCCCCCCcCCCCceeEEeEEEEeEEEEccCC---------------CceecEEEEeEEEEE
Q 042417 171 CPYNKCNIKVPSQVKTSNVRFNNIRGTSANK---------------IPCQNIGIGNINWVY 216 (249)
Q Consensus 171 ~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~~---------------~~~~~i~~~nv~i~~ 216 (249)
-.+... .+|......||+++|+....... ..++++.+.++..-.
T Consensus 283 iG~~~a--~dp~s~~a~nV~l~n~~~~~p~~~~~~y~~~~~r~l~vs~~~~v~i~~~~~~~ 341 (609)
T 3gq8_A 283 IGHHAA--TAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYT 341 (609)
T ss_dssp TTSCST--TSCCCSSCEEEEEEEEEEESCCCTTCHHHHCCCEEEEEESCEEEEEEEEEEEC
T ss_pred EccccC--CCCCcceecceEeecceEEeecccCceeeCCCcceEEEEcCCCeEEcCceEcc
Confidence 111110 12334467999999999887654 446788888888773
No 33
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=98.98 E-value=5.6e-09 Score=100.32 Aligned_cols=155 Identities=15% Similarity=0.171 Sum_probs=108.4
Q ss_pred EEEEEecCCCceeceeEecccCeEEEEEc-----------------eeeEEEEeeEEecCCCCCCCcceEecCcccEEEE
Q 042417 47 SIRFNFLNDSTITGIKSVDSRYFHINILG-----------------CYNLKLNDLKITAHADSPNTEGIHIGSSNGSEIS 109 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~~~~i~~~~-----------------s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~ 109 (249)
+|.|.+|+|++|++++++|+|++++.+.. |+||+|+|++|... ..|+|.+.+|+||+|+
T Consensus 136 lI~f~~ckNV~I~gVti~NSp~~gI~I~np~~NDGid~DGi~fdi~S~NV~I~Nc~I~nt----GDDcIAIksSeNI~I~ 211 (772)
T 3gqn_A 136 NLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGF----GDDGITTHHSQYINIL 211 (772)
T ss_dssp SEEEESCEEEEEEEEEEESCSSCSEEEECSSSSCCCCCTTCCCSSCCEEEEEESCEEESC----SSCSEEECSCEEEEEE
T ss_pred EEEEEeeceEEEEeEEEEeCCCCCEEEeCCCcCCcCCCcCcccccccceEEEEeeEEEec----CcCeEEecCCceEEEE
Confidence 68999999999999999999998887753 89999999999653 4699999999999999
Q ss_pred eeEEecC-----CCeeEeCcceEEccCCCCCCCCceEeEEEEee----EEEcc-------ceEEec-C--CccEEEEeee
Q 042417 110 HSVIATG-----DDCVSLGHGISVGSLGKGINDEEVVGLTVRNC----TFTGT-------NIVTNN-V--ENPIVIDQLY 170 (249)
Q Consensus 110 n~~i~~g-----DD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~----~~~~~-------nI~~~n-v--~~~i~i~~~y 170 (249)
||++... ..+|.+|.|. .. -.|+|.++.++ .+... ||.+.+ + +.....+..+
T Consensus 212 Nc~c~gphG~S~~~GIsIGsgs---~N------VtV~Nc~~~nT~nGIRIKt~~~gg~v~NV~I~gnis~~dvrsynir~ 282 (772)
T 3gqn_A 212 NCYSHDPRLTANCNGFEIDDGS---RH------VVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRH 282 (772)
T ss_dssp SCEEECCSSSSSCCSEEECTTC---EE------EEEEEEEEESSSEEEEECCCTTSCCCEEEEEEEEEEESCSEEEEECC
T ss_pred eEEEECCCCCCCcccEEecCCc---cc------EEEEceEEECCCcEEEEEEeCCCCccccEEEECCEEeccCeEecceE
Confidence 9999544 4689997664 22 14667777663 23311 666654 2 1222222221
Q ss_pred CCCCCCCcCCCCceeEEeEEEEeEEEEccCC---------------CceecEEEEeEEEEE
Q 042417 171 CPYNKCNIKVPSQVKTSNVRFNNIRGTSANK---------------IPCQNIGIGNINWVY 216 (249)
Q Consensus 171 ~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~~---------------~~~~~i~~~nv~i~~ 216 (249)
-.+... .+|...+..||.++|+....... ..++++.+.|+..-.
T Consensus 283 iG~h~a--~dp~s~~a~nV~l~n~~~~~P~~~~~ly~~~~praL~vsay~~v~i~~~~~ig 341 (772)
T 3gqn_A 283 IGHHAA--TAPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYT 341 (772)
T ss_dssp TTSCSS--SSCCCSSCEEEEEEEEEEESCCCSSCHHHHCCCEEEEEESCEEEEEEEEEEEC
T ss_pred EccccC--CCCCCccCccEEeecceEEcccccCceeeCCCcceEEEEcCCCcEecCceecc
Confidence 111110 22334478999999999887654 446788888888774
No 34
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=98.93 E-value=1.1e-09 Score=105.20 Aligned_cols=110 Identities=16% Similarity=0.271 Sum_probs=73.8
Q ss_pred CeeeeecCccCCCccchHHHHHHHHHHHhhcCCCCcEEEecCCeEE---EEEEEecCCCceece---eEecc--------
Q 042417 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL---SIRFNFLNDSTITGI---KSVDS-------- 66 (249)
Q Consensus 1 ~~~v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~---~i~~~~~~nv~i~gi---~i~ns-------- 66 (249)
++||+||||+|||++|||+|||+||+++ .+ +.+||||+|+|+ .|.+. .+++|.|. +|...
T Consensus 400 ~vnVkd~GA~GDG~tDDT~Ai~~al~aa---~~-g~~v~~P~G~Y~vt~Ti~ip--~~~~ivG~~~~~I~~~G~~F~d~~ 473 (758)
T 3eqn_A 400 FVSVRSQGAKGDGHTDDTQAIKNVFAKY---AG-CKIIFFDAGTYIVTDTIQIP--AGTQIVGEVWSVIMGTGSKFTDYN 473 (758)
T ss_dssp EEETTTTTCCCEEEEECHHHHHHHHHHH---TT-TSEEECCSEEEEESSCEEEC--TTCEEECCSSEEEEECSGGGCCTT
T ss_pred eEEeeeccccCCCCchhHHHHHHHHHHh---cC-CCEEEECCCEeEECCeEEcC--CCCEEEecccceEecCCccccCCC
Confidence 4799999999999999999999999633 33 679999999997 45553 66666554 22221
Q ss_pred -cCeEEEE---EceeeEEEEeeEEecCCCCCCCcceEecC------cccEEEEeeEEecC
Q 042417 67 -RYFHINI---LGCYNLKLNDLKITAHADSPNTEGIHIGS------SNGSEISHSVIATG 116 (249)
Q Consensus 67 -~~~~i~~---~~s~nv~I~n~~i~~~~~~~n~DGi~~~~------s~nv~I~n~~i~~g 116 (249)
|.-.+.+ -..-.+.|+++.++.....+.+-.+.+.. ...+.+-|++|+.|
T Consensus 474 ~P~pvv~VG~~gd~G~veisdl~~~t~g~~~gail~ewn~~~~~~~~~~~~mwDvh~RiG 533 (758)
T 3eqn_A 474 NPQPVIQVGAPGSSGVVEITDMIFTTRGPAAGAIIVEWNVHDPSGQQAAAGAWDTHLIIG 533 (758)
T ss_dssp SCEEEEEESCTTCBSCEEEESCEEEECSCCTTEEEEEECCBCCTTCTTCEEEESCBEEES
T ss_pred CCeeeEEeCCCCCCCeEEEEeEEEEecCCCCCcEEEEEcCCCCCCCCCCeeEEEEEEEec
Confidence 2223444 22347899999999644333333333321 13678888888854
No 35
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=98.66 E-value=6.6e-08 Score=91.44 Aligned_cols=141 Identities=18% Similarity=0.195 Sum_probs=98.9
Q ss_pred EEEEEecCCC--ceeceeEecccCe---EEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCC-e-
Q 042417 47 SIRFNFLNDS--TITGIKSVDSRYF---HINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDD-C- 119 (249)
Q Consensus 47 ~i~~~~~~nv--~i~gi~i~ns~~~---~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD-~- 119 (249)
.+++.+|+++ +|+++++.+++.| ++++. +||+|+|++|.+ +.|+|.+.+ +||+|+||++..+.. +
T Consensus 349 ~i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi~--~NV~I~nc~I~~-----gDDcIaIks-~NI~I~nc~i~~g~g~g~ 420 (574)
T 1ogo_X 349 TMDFNGNSGISSQISDYKQVGAFFFQTDGPEIY--PNSVVHDVFWHV-----NDDAIKIYY-SGASVSRATIWKCHNDPI 420 (574)
T ss_dssp SEEECSSSCEEEEEEEEEEECCCSTTCCCCBCC--TTCEEEEEEEEE-----SSCSEECCS-TTCEEEEEEEEECSSSCS
T ss_pred EEeecCCCChhhEEEeeEeeCCCCCCCccCccc--CCEEEEeeEEEC-----CCCEEEECC-ccEEEEeEEEECCCCCce
Confidence 5788899999 9999999876554 57777 999999999998 467998887 999999999988764 3
Q ss_pred eEeCc----------------------------ceEEccCCCCC----C--CCceEeEEEEeeEEEccceEEecCCccEE
Q 042417 120 VSLGH----------------------------GISVGSLGKGI----N--DEEVVGLTVRNCTFTGTNIVTNNVENPIV 165 (249)
Q Consensus 120 i~ig~----------------------------Gi~iGs~g~~~----~--~~~v~ni~v~n~~~~~~nI~~~nv~~~i~ 165 (249)
|++|. |..+|++..+. . ..+| ||+|+ ||+|++++.++
T Consensus 421 IsIGS~~g~V~NV~v~N~~i~~~~~~~~~~~~~g~iiGs~~~y~~~~~~~~g~gV-NI~f~-------NI~~~~v~~~i- 491 (574)
T 1ogo_X 421 IQMGWTSRDISGVTIDTLNVIHTRYIKSETVVPSAIIGASPFYASGMSPDSRKSI-SMTVS-------NVVCEGLCPSL- 491 (574)
T ss_dssp EECCSSCCCEEEEEEEEEEEEECCCSSCCTTTTCEEEEECCCSSSSCCCEEEEEE-EEEEE-------EEEECSSBCEE-
T ss_pred EEEcCCCCcEEEEEEEeEEEECCcccceeccccceeeccccccccccccCCCceE-EEEEE-------eEEEEceeEee-
Confidence 67632 11122221110 0 0115 55555 56666777764
Q ss_pred EEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEc------cCC---------CceecEEEEeEEEEE
Q 042417 166 IDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTS------ANK---------IPCQNIGIGNINWVY 216 (249)
Q Consensus 166 i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~------~~~---------~~~~~i~~~nv~i~~ 216 (249)
+.. .| ...|+||+|+||+.+. ... .+|++|+|+||+|..
T Consensus 492 i~i-----------~p-~~~I~nI~~~NI~i~g~~~~~~~~~~~~~i~G~~~~v~nI~~~NV~i~g 545 (574)
T 1ogo_X 492 FRI-----------TP-LQNYKNFVVKNVAFPDGLQTNSIGTGESIIPAASGLTMGLAISAWTIGG 545 (574)
T ss_dssp EEE-----------CC-SEEEEEEEEEEEEETTCBCCSTTCTTCEEECCCTTCCEEEEEEEEEETT
T ss_pred EEE-----------CC-CCCEEEEEEEeEEEeCccccccccccceeEecCCCccceEEEEeEEEeC
Confidence 332 01 2479999999999765 111 589999999999953
No 36
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=98.60 E-value=3e-07 Score=86.67 Aligned_cols=145 Identities=15% Similarity=0.153 Sum_probs=95.1
Q ss_pred EEEEe-c-CC--CceeceeEecccCe---EEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCC-e
Q 042417 48 IRFNF-L-ND--STITGIKSVDSRYF---HINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDD-C 119 (249)
Q Consensus 48 i~~~~-~-~n--v~i~gi~i~ns~~~---~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD-~ 119 (249)
+++.. | ++ ++|+++++.+++.| ++++. +||+|+|++|.+ +.|+|.+.+ +||+|+||++..+.. +
T Consensus 310 i~i~~~~~~ni~V~I~n~~i~~~~~~NTDGidi~--~nV~I~n~~i~~-----gDDcIaIks-~NI~I~n~~~~~~~g~~ 381 (549)
T 1x0c_A 310 MDWSGNSLDLITCRVDDYKQVGAFYGQTDGLEMY--PGTILQDVFYHT-----DDDGLKMYY-SNVTARNIVMWKESVAP 381 (549)
T ss_dssp EEEECSCGGGEEEEEEEEEEECCCBTTCCCCBCC--TTCEEEEEEEEE-----SSCCEECCS-SSEEEEEEEEEECSSSC
T ss_pred EEeeccCCCCCeEEEEeeEeEcCCCCCCCccccc--CCEEEEeeEEeC-----CCCEEEECC-CCEEEEeeEEEcCCCCc
Confidence 55443 4 58 99999999875443 46666 999999999998 467998887 999999999987544 3
Q ss_pred -eEeCc--------------------------ceEEccCCCC--C-------CCCceEeEEEEeeEEEccceEEecCCcc
Q 042417 120 -VSLGH--------------------------GISVGSLGKG--I-------NDEEVVGLTVRNCTFTGTNIVTNNVENP 163 (249)
Q Consensus 120 -i~ig~--------------------------Gi~iGs~g~~--~-------~~~~v~ni~v~n~~~~~~nI~~~nv~~~ 163 (249)
|++|. |..|++...+ + +.+.|+||+|+|++|. |++. ++
T Consensus 382 ~IsiGs~~~~V~NV~v~n~~i~~s~~~k~~~~g~iI~~~~~~~~g~~~~~~d~~G~i~nI~f~NI~i~--nv~~----~g 455 (549)
T 1x0c_A 382 VVEFGWTPRNTENVLFDNVDVIHQAYANAGNNPGIFGAVNNYLYAPDGLSSNHSTGNSNMTVRNITWS--NFRA----EG 455 (549)
T ss_dssp SEECCBSCCCEEEEEEEEEEEEECCCCSGGGCCCSEEECCBTTTCTTSCCSCCCCBEEEEEEEEEEEE--EEEE----EE
T ss_pred eEEECCCCCcEEEEEEEeeEEECccccccccceEEEecccccccCccccCcCCCceEccEEEEeEEEE--eEEE----ec
Confidence 56621 1112221001 1 2456889999976666 3332 33
Q ss_pred EEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccC-----C----------------CceecEEEEeEEEE
Q 042417 164 IVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSAN-----K----------------IPCQNIGIGNINWV 215 (249)
Q Consensus 164 i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~-----~----------------~~~~~i~~~nv~i~ 215 (249)
+.+.+.+ ..+ ..+|+||+|+||+.+... . .+|++|+|+||+|.
T Consensus 456 ~~~~~~~--------g~p-g~~I~nI~i~NI~i~~~~~~~~~~~~~~i~G~~~~~~~~~~~v~nI~f~NV~i~ 519 (549)
T 1x0c_A 456 SSSALFR--------INP-IQNLDNISIKNVSIESFEPLSINTTESWMPVWYDLNNGKQITVTDFSIEGFTVG 519 (549)
T ss_dssp EECCSEE--------ECC-SEEEEEEEEEEEEEEEECCGGGTCSCEEECCCBBTTTCCBCCEEEEEEEEEEET
T ss_pred eEEeeec--------CCC-CCcCccEEEEEEEEEccccccccccceEEeCCCccccccceeeeeEEEEeEEEe
Confidence 3333222 112 236999999999854433 1 45899999999985
No 37
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=98.37 E-value=2.7e-06 Score=80.07 Aligned_cols=149 Identities=10% Similarity=-0.021 Sum_probs=101.5
Q ss_pred CeEEEEEE---EecCCCceecee----EecccC-eEEEEEceeeEEEEeeEEecCCCCCCCcceEe-cCcc--cEEEEee
Q 042417 43 GKYLSIRF---NFLNDSTITGIK----SVDSRY-FHINILGCYNLKLNDLKITAHADSPNTEGIHI-GSSN--GSEISHS 111 (249)
Q Consensus 43 G~y~~i~~---~~~~nv~i~gi~----i~ns~~-~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~-~~s~--nv~I~n~ 111 (249)
..| .+++ ..|+|++|++++ |.++|. .++ |+|+|+.|.+ ..|+|.+ .+.. ++.++
T Consensus 197 P~w-~I~iG~~~~c~NVtI~nvtfi~aI~sspNTDGI-------V~I~nc~I~t-----GDDCIAI~KSGs~~ni~~e-- 261 (600)
T 2x6w_A 197 VTW-AITLGWNGYGSNCYVRKCRFINLVNSSVNADHS-------TVYVNCPYSG-----VESCYFSMSSSFARNIACS-- 261 (600)
T ss_dssp CSC-SEEECBTTBEEEEEEESCEEECCCCCSSCCCEE-------EEEECSSSEE-----EESCEEECCCTTHHHHEEE--
T ss_pred Ccc-EEEeCCCCCcccEEEeCeEEcceEecCCCCCEE-------EEEEeeEEec-----CCcEEEEecCCCcCCeEEE--
Confidence 344 6888 889999999999 766332 334 9999999988 4689999 6543 46677
Q ss_pred EEecCCCeeEeCcceE-----------EccCCCCCCCCceEeEEEEeeEEEcc-------------------ceEEecCC
Q 042417 112 VIATGDDCVSLGHGIS-----------VGSLGKGINDEEVVGLTVRNCTFTGT-------------------NIVTNNVE 161 (249)
Q Consensus 112 ~i~~gDD~i~ig~Gi~-----------iGs~g~~~~~~~v~ni~v~n~~~~~~-------------------nI~~~nv~ 161 (249)
.+..|+.+|+||+... |.+.. +..+.|+||+|+|++|.+. ||+|+|+.
T Consensus 262 ~~~~GHgGISIGSe~~ggV~NV~V~NrIKt~~--G~GG~V~NItfeNI~m~nV~~~I~i~q~~~~~s~~~IsnItfkNIt 339 (600)
T 2x6w_A 262 VQLHQHDTFYRGSTVNGYCRGAYVVMHAAEAA--GAGSYAYNMQVENNIAVIYGQFVILGSDVTATVSGHLNDVIVSGNI 339 (600)
T ss_dssp EEECSSSEEEESCEEEEESEEEEEEECGGGCT--TTCSEEEEEEEESCEEEESSEEEEEEECBCSSCBCEEEEEEEESCE
T ss_pred EEcCCCCcEEecccccCcEEEEEEEEEEEeec--CCCceEEEEEEEEEEEEccceEEEeCCCCCCCCCceEEEEEEEeEE
Confidence 5667888999976322 33332 2236799999999999986 77777763
Q ss_pred c------------cEEEEeeeCCCCCCCcCCCCceeEEeEEEEeEEEEccCC----------CceecEEEEeEE
Q 042417 162 N------------PIVIDQLYCPYNKCNIKVPSQVKTSNVRFNNIRGTSANK----------IPCQNIGIGNIN 213 (249)
Q Consensus 162 ~------------~i~i~~~y~~~~~~~~~~~~~~~i~nI~~~ni~g~~~~~----------~~~~~i~~~nv~ 213 (249)
. +..|... ...|. .....+|++|+|+|++....+. ..+++|+|.+-.
T Consensus 340 gTsas~aav~~~~g~~i~g~---p~~~~--~~~~~~Ie~V~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 408 (600)
T 2x6w_A 340 VSIGERAAFSAPFGAFIDIG---PDNSG--ASNVQDIQRVLVTGNSFYAPANITDSAAITLRANLNGCTFIANN 408 (600)
T ss_dssp EEECSCCTTSSSCEEEEEEC---CCTTC--CSSSCCEEEEEEESCEEECCTTCSSEEEEEECSCBSCEEEESCE
T ss_pred EEeccccccccccceEEEec---Ccccc--cccccceeEEEEeceEEEcCCccCCCcceeeeccccceEEecCc
Confidence 1 0122211 11111 1234589999999999876444 678899998877
No 38
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=98.24 E-value=7.9e-06 Score=73.09 Aligned_cols=102 Identities=14% Similarity=0.160 Sum_probs=71.0
Q ss_pred ecCCCceeceeEecccCeEEEEEcee-eEEEEeeEEecCC-------------------CCCCCcceEecC-cccEEEEe
Q 042417 52 FLNDSTITGIKSVDSRYFHINILGCY-NLKLNDLKITAHA-------------------DSPNTEGIHIGS-SNGSEISH 110 (249)
Q Consensus 52 ~~~nv~i~gi~i~ns~~~~i~~~~s~-nv~I~n~~i~~~~-------------------~~~n~DGi~~~~-s~nv~I~n 110 (249)
.|++++|+++++++++.|++++..|. ++.++|+.+.... ..++.|||++.. |++++|++
T Consensus 132 ~~~nv~I~~~~i~n~~~~gi~~~~~~~~~~i~n~~~~~~~~dGI~~~~s~~~~i~~N~~~~~~~~GI~~~~~s~~v~I~n 211 (377)
T 2pyg_A 132 ADRDVTIERVEVREMSGYGFDPHEQTINLTIRDSVAHDNGLDGFVADYLVDSVFENNVAYANDRHGFNVVTSTHDFVMTN 211 (377)
T ss_dssp CEEEEEEEEEEEECCSSCSEEECSSEEEEEEESCEEESCSSCSEEEESEEEEEEESCEEESCSSCSEEEETTCEEEEEES
T ss_pred cccceEEEeEEEEecccceEEeecccCCeEEEeEEeecCCCCceeEeccCCcEEECcEEEccccCcEEEEeccCCeEEEC
Confidence 68899999999999999999998764 7888877762210 124689999876 89999999
Q ss_pred eEEecCCCeeEe---Ccc-------eE------EccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 111 SVIATGDDCVSL---GHG-------IS------VGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 111 ~~i~~gDD~i~i---g~G-------i~------iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
+.+...++|+++ ++. +. .++.+..-....+++++|+|+++.+.
T Consensus 212 N~i~~~~~g~~~~~~g~~~~~~s~nv~i~~N~~~~n~~~Gi~~~~~~~v~i~~N~i~~~ 270 (377)
T 2pyg_A 212 NVAYGNGSSGLVVQRGLEDLALPSNILIDGGAYYDNAREGVLLKMTSDITLQNADIHGN 270 (377)
T ss_dssp CEEESCSSCSEEEECCSSCCCCCEEEEEESCEEESCSSCSEEEEEEEEEEEESCEEESC
T ss_pred CEEECccCceEEEeccccCCCCCccEEEECCEEEcCccCceEeccccCeEEECCEEECC
Confidence 999988888776 111 11 12111100112477888888888775
No 39
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.98 E-value=0.00017 Score=64.38 Aligned_cols=94 Identities=20% Similarity=0.257 Sum_probs=64.4
Q ss_pred chHHHHHHHHHHHhhcCCCCcEEEecCCeEEE---------------EEEEecCCCceece----eEecccCeEEEEEce
Q 042417 16 DDSKAFETAWREACNWDGIKSAVLVPPGKYLS---------------IRFNFLNDSTITGI----KSVDSRYFHINILGC 76 (249)
Q Consensus 16 ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~~---------------i~~~~~~nv~i~gi----~i~ns~~~~i~~~~s 76 (249)
-..++|++||.+ ... +-+|+...|++.+ +.+.-.+|.+|.|. .|. ...+.+..+
T Consensus 31 tt~~~L~~al~~--~~~--~p~VI~V~GtI~~~~~~~~~s~~~~~~~~~l~v~sn~TI~G~G~~~~i~---g~gl~i~~~ 103 (355)
T 1pcl_A 31 KNISDFKKALNG--TDS--SAKIIKVTGPIDISGGKAYTSFDDQKARSQISIPSNTTIIGVGSNGKFT---NGSLVIKGV 103 (355)
T ss_pred CCHHHHHHHHhh--CCC--CcEEEEECCEEecCCccccccccccccceeEEeCCCeEEEEecCCeEEe---cCEEEEecC
Confidence 456678888832 223 3467778898531 22333466666653 333 346778889
Q ss_pred eeEEEEeeEEecCCC-----------CCCCcceEecCcccEEEEeeEEecC
Q 042417 77 YNLKLNDLKITAHAD-----------SPNTEGIHIGSSNGSEISHSVIATG 116 (249)
Q Consensus 77 ~nv~I~n~~i~~~~~-----------~~n~DGi~~~~s~nv~I~n~~i~~g 116 (249)
+||.|+|++|....+ ..+.|+|.+..++||+|.+|.|..+
T Consensus 104 ~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~ 154 (355)
T 1pcl_A 104 KNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDG 154 (355)
T ss_pred CeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEecc
Confidence 999999999986421 1347999999999999999999864
No 40
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=97.96 E-value=0.0001 Score=65.19 Aligned_cols=98 Identities=22% Similarity=0.306 Sum_probs=64.2
Q ss_pred HHHHHHHHHHhhcCCCCcEEEecCCeEEE---EEEEecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCC--CCC
Q 042417 19 KAFETAWREACNWDGIKSAVLVPPGKYLS---IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA--DSP 93 (249)
Q Consensus 19 ~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~~---i~~~~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~--~~~ 93 (249)
+.|+.|+ .+.+ +.+| +-+|++.+ -.+.-.+|.+|.|..-..-....+.+..++||.|+|++|.... +.+
T Consensus 36 ~dLr~al----~~~~-PriI-vv~G~I~~~~~~~l~v~snkTI~G~ga~~I~G~Gi~I~~a~NVIIrnl~i~~~~~~~~~ 109 (340)
T 3zsc_A 36 EELEKYT----TAEG-KYVI-VVDGTIVFEPKREIKVLSDKTIVGINDAKIVGGGLVIKDAQNVIIRNIHFEGFYMEDDP 109 (340)
T ss_dssp HHHHHHH----TSSS-CEEE-EEEEEEEEEEEEEEEECSSEEEEEEEEEEEEEEEEEEESCEEEEEESCEEECCCCTTCT
T ss_pred HHHHHHH----hCCC-CEEE-EECcEEEeCCcceEEecCCCEEEeccCcEEecCceEEEcCceEEEeCeEEECCccccCc
Confidence 3477666 3344 4445 45787521 1122256666666432111145788888999999999999753 122
Q ss_pred -----CCcceEecCcccEEEEeeEEecC-CCeeEe
Q 042417 94 -----NTEGIHIGSSNGSEISHSVIATG-DDCVSL 122 (249)
Q Consensus 94 -----n~DGi~~~~s~nv~I~n~~i~~g-DD~i~i 122 (249)
..|+|.+..++||+|.+|.+..+ |.++.+
T Consensus 110 ~~~~~~~DaI~i~~s~nVWIDHcs~s~~~Dg~idi 144 (340)
T 3zsc_A 110 RGKKYDFDYINVENSHHIWIDHITFVNGNDGAVDI 144 (340)
T ss_dssp TSCSSCCCSEEEESCEEEEEESCEEESCSSCSEEE
T ss_pred cCCcCCCCeEEEecCCcEEEEeeeeccCCccceEE
Confidence 68999999999999999999885 444444
No 41
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=97.89 E-value=0.00011 Score=66.52 Aligned_cols=23 Identities=30% Similarity=0.579 Sum_probs=18.4
Q ss_pred HHHHHHHHHhhcCCCCcEEEecCCeEE
Q 042417 20 AFETAWREACNWDGIKSAVLVPPGKYL 46 (249)
Q Consensus 20 Aiq~Ai~~a~~~~g~g~~v~iP~G~y~ 46 (249)
.||+|++.| + + |.+|+|.+|+|.
T Consensus 37 tiq~Ai~~a-~-p--GdtI~l~~GtY~ 59 (400)
T 1ru4_A 37 SFSAAMAAV-N-P--GELILLKPGTYT 59 (400)
T ss_dssp CHHHHHHHC-C-T--TCEEEECSEEEE
T ss_pred cHHHHHhhC-C-C--CCEEEECCCeEc
Confidence 699999644 2 3 689999999995
No 42
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=97.89 E-value=5.8e-05 Score=66.72 Aligned_cols=96 Identities=16% Similarity=0.271 Sum_probs=61.7
Q ss_pred hHHHHHHHHHHHhhcCCCCcEEEecCCeEE----------------EEEEEecCCCceeceeEecccCeEEEEE-ceeeE
Q 042417 17 DSKAFETAWREACNWDGIKSAVLVPPGKYL----------------SIRFNFLNDSTITGIKSVDSRYFHINIL-GCYNL 79 (249)
Q Consensus 17 dt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~----------------~i~~~~~~nv~i~gi~i~ns~~~~i~~~-~s~nv 79 (249)
+.+.|++|+.. ++..+ +.+|+| .|++. .+.+.-.+|.+|.|-+.. -....+.+. .++||
T Consensus 22 t~~~L~~al~~-~~~~~-p~iI~~-~G~i~~~~~~~~c~~~~~~~~~~~l~v~sn~TI~G~~a~-i~g~gl~i~~~~~NV 97 (330)
T 2qy1_A 22 TFEAMQSAIDS-YSGSG-GLVLNY-TGKFDFGTIKDVCAQWKLPAKTVQIKNKSDVTIKGANGS-AANFGIRVVGNAHNV 97 (330)
T ss_dssp SHHHHHHHHHH-SCSSS-CEEEEE-CCBCCGGGCCCGGGSTTSCCCEEEEESCCSEEEEECTTC-BBSSEEEEESSCEEE
T ss_pred CHHHHHHHHhc-cCCCC-CEEEEE-ccEEecccccccccccccccceeEEEcCCCeEEECCCcE-EeeeeEEEeCCCCeE
Confidence 34578888843 22344 667777 77631 123333445444332100 114678888 89999
Q ss_pred EEEeeEEecCCCCCCCcceEec-----CcccEEEEeeEEecC
Q 042417 80 KLNDLKITAHADSPNTEGIHIG-----SSNGSEISHSVIATG 116 (249)
Q Consensus 80 ~I~n~~i~~~~~~~n~DGi~~~-----~s~nv~I~n~~i~~g 116 (249)
.|+|++|.........|+|.+. .++||+|++|.|..+
T Consensus 98 IIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~ 139 (330)
T 2qy1_A 98 IIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFAS 139 (330)
T ss_dssp EEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECC
T ss_pred EEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEcc
Confidence 9999999864332367999998 589999999999643
No 43
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.82 E-value=0.00026 Score=62.90 Aligned_cols=92 Identities=11% Similarity=0.100 Sum_probs=62.4
Q ss_pred HHHHHHHHhhcCCCCcEEEec-CCeEE---EEEEEecCCCceecee----EecccCeEEEEEceeeEEEEeeEEecCC--
Q 042417 21 FETAWREACNWDGIKSAVLVP-PGKYL---SIRFNFLNDSTITGIK----SVDSRYFHINILGCYNLKLNDLKITAHA-- 90 (249)
Q Consensus 21 iq~Ai~~a~~~~g~g~~v~iP-~G~y~---~i~~~~~~nv~i~gi~----i~ns~~~~i~~~~s~nv~I~n~~i~~~~-- 90 (249)
|+.|+.+ .+ +.+|+|- .|++. .|.+ .++++|.|.. |.. ..+++.+..++||.|+|++|....
T Consensus 58 Lr~av~~----~~-P~~Ivf~~~g~I~l~~~l~V--~sn~TI~G~ga~~~i~G-~G~gi~i~~a~NVIIrnl~i~~~~~~ 129 (346)
T 1pxz_A 58 LRYGATR----EK-ALWIIFSQNMNIKLKMPLYV--AGHKTIDGRGADVHLGN-GGPCLFMRKVSHVILHSLHIHGCNTS 129 (346)
T ss_dssp HHHHHHC----SS-CEEEEESSCEEECCSSCEEC--CSSEEEECTTSCEEEET-TSCCEEEESCEEEEEESCEEECCCCC
T ss_pred hHHHhcc----CC-CeEEEEcCCcEEecCccEEe--cCCeEEEccCCceEEeC-CcceEEEEccCCEEEEeeEEEeeccC
Confidence 7878732 34 5666664 45542 1222 3465666531 111 136788889999999999997531
Q ss_pred ----------------CCCCCcceEecCcccEEEEeeEEecCCCee
Q 042417 91 ----------------DSPNTEGIHIGSSNGSEISHSVIATGDDCV 120 (249)
Q Consensus 91 ----------------~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i 120 (249)
.....|||.+..+++|+|++|.|..+.|.+
T Consensus 130 ~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~~~Dg~ 175 (346)
T 1pxz_A 130 VLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSDCSDGL 175 (346)
T ss_dssp CSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEECCSSEE
T ss_pred CCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEecCCCCc
Confidence 125789999999999999999999977765
No 44
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=97.75 E-value=0.00024 Score=63.39 Aligned_cols=72 Identities=18% Similarity=0.248 Sum_probs=54.0
Q ss_pred eEEEEE-ceeeEEEEeeEEecCCC--CCCCcceEecCcccEEEEeeEEec-CCCeeEeCcceEEccCCCCCCCCceEeEE
Q 042417 69 FHINIL-GCYNLKLNDLKITAHAD--SPNTEGIHIGSSNGSEISHSVIAT-GDDCVSLGHGISVGSLGKGINDEEVVGLT 144 (249)
Q Consensus 69 ~~i~~~-~s~nv~I~n~~i~~~~~--~~n~DGi~~~~s~nv~I~n~~i~~-gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~ 144 (249)
..+.+. .++||.|+|++|..... ....|+|.+..++||+|++|.+.. +|+.+.. |. ..-.+|+
T Consensus 124 ~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~~d~~~~~------g~-------~~s~~VT 190 (359)
T 1idk_A 124 KGLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARIGRQHYVL------GT-------SADNRVS 190 (359)
T ss_dssp CCEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEESSCSEEE------CC-------CTTCEEE
T ss_pred ceEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecCCCCcEEe------cc-------cCcceEE
Confidence 457777 78999999999997421 246799999999999999999986 5544432 11 1345889
Q ss_pred EEeeEEEcc
Q 042417 145 VRNCTFTGT 153 (249)
Q Consensus 145 v~n~~~~~~ 153 (249)
|+||.|.+.
T Consensus 191 ISnn~f~~~ 199 (359)
T 1idk_A 191 LTNNYIDGV 199 (359)
T ss_dssp EESCEEECB
T ss_pred EECcEecCC
Confidence 999999753
No 45
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=97.68 E-value=0.00039 Score=62.86 Aligned_cols=47 Identities=17% Similarity=0.253 Sum_probs=38.5
Q ss_pred eEEEEEceeeEEEEeeEEecCCC---------------CCCCcceEecCcccEEEEeeEEecC
Q 042417 69 FHINILGCYNLKLNDLKITAHAD---------------SPNTEGIHIGSSNGSEISHSVIATG 116 (249)
Q Consensus 69 ~~i~~~~s~nv~I~n~~i~~~~~---------------~~n~DGi~~~~s~nv~I~n~~i~~g 116 (249)
..+.+.. +||.|+|++|....+ ....|+|.+..++||+|.+|.|..+
T Consensus 143 ~gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~ 204 (399)
T 2o04_A 143 GNFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDG 204 (399)
T ss_dssp CEEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECT
T ss_pred CEEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecC
Confidence 5677777 999999999986422 1357999999999999999999865
No 46
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=97.58 E-value=0.00084 Score=59.91 Aligned_cols=72 Identities=18% Similarity=0.270 Sum_probs=54.0
Q ss_pred eEEEEE-ceeeEEEEeeEEecCCC--CCCCcceEecCcccEEEEeeEEec-CCCeeEeCcceEEccCCCCCCCCceEeEE
Q 042417 69 FHINIL-GCYNLKLNDLKITAHAD--SPNTEGIHIGSSNGSEISHSVIAT-GDDCVSLGHGISVGSLGKGINDEEVVGLT 144 (249)
Q Consensus 69 ~~i~~~-~s~nv~I~n~~i~~~~~--~~n~DGi~~~~s~nv~I~n~~i~~-gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~ 144 (249)
..+.+. .++||.|+|++|..... ....|||.+..++||+|++|.+.. +|..+.. +. ..-.+|+
T Consensus 124 ~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~~d~~~~~------~~-------~~s~~vT 190 (359)
T 1qcx_A 124 KGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVL------GT-------SADNRVT 190 (359)
T ss_dssp CCEEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEESSCSEEE------CS-------SCCEEEE
T ss_pred ceEEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeeccCcCceee------cc-------cccccEE
Confidence 457777 88999999999987432 246799999999999999999986 4433321 11 2457899
Q ss_pred EEeeEEEcc
Q 042417 145 VRNCTFTGT 153 (249)
Q Consensus 145 v~n~~~~~~ 153 (249)
|+|+.|.+.
T Consensus 191 ISnn~f~~~ 199 (359)
T 1qcx_A 191 ISYSLIDGR 199 (359)
T ss_dssp EESCEEECB
T ss_pred EECcEecCC
Confidence 999999853
No 47
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=97.58 E-value=0.00061 Score=60.66 Aligned_cols=62 Identities=18% Similarity=0.244 Sum_probs=45.5
Q ss_pred CCCceeceeEecccCeEEEEEceeeEEEEeeEEecCC-CCCCCcceEecCcccEEEEeeEEecC
Q 042417 54 NDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHA-DSPNTEGIHIGSSNGSEISHSVIATG 116 (249)
Q Consensus 54 ~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~-~~~n~DGi~~~~s~nv~I~n~~i~~g 116 (249)
.|++|.|.+- .....+|.+..++||.|+|++|.... ...+.|+|.+..++||+|.+|.|..+
T Consensus 89 sn~TI~G~~~-~~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~ 151 (353)
T 1air_A 89 KGITIIGANG-SSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAA 151 (353)
T ss_dssp SCEEEEECTT-CCBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECC
T ss_pred CCEEEEeccC-CCCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecC
Confidence 4555555321 11256788889999999999998542 12467999999999999999999753
No 48
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=97.55 E-value=0.00068 Score=59.67 Aligned_cols=92 Identities=13% Similarity=0.111 Sum_probs=60.2
Q ss_pred HHHHHHHHHH---HhhcCCCCcEEEecCCeEEEEEEEec--CCCce----------eceeEeccc------CeEEEEEce
Q 042417 18 SKAFETAWRE---ACNWDGIKSAVLVPPGKYLSIRFNFL--NDSTI----------TGIKSVDSR------YFHINILGC 76 (249)
Q Consensus 18 t~Aiq~Ai~~---a~~~~g~g~~v~iP~G~y~~i~~~~~--~nv~i----------~gi~i~ns~------~~~i~~~~s 76 (249)
-++|++|+.+ ++...+ + .+++=.|+ |.+.+. +.+.| .+++|.... .+.+.+..+
T Consensus 28 l~dL~~Al~~~~~~~~~~~-p-~iI~V~G~---I~l~~~~~~~i~v~~~~~~~~~~sn~TI~G~g~~~~i~G~gl~i~~a 102 (326)
T 3vmv_A 28 GAQIQQLIDNRSRSNNPDE-P-LTIYVNGT---ITQGNSPQSLIDVKNHRGKAHEIKNISIIGVGTNGEFDGIGIRLSNA 102 (326)
T ss_dssp HHHHHHHHHHHHHSSCTTS-C-EEEEECSE---EESTTCSSSSEEESCTTCTTSCEEEEEEEECTTCCEEESCCEEEESE
T ss_pred HHHHHHHHhhcccccCCCC-C-EEEEEeeE---EecCCCCCceEEEecccccccCCCCeEEEecCCCeEEeCcEEEEEec
Confidence 3458888852 111333 3 44445675 444311 22333 355555432 356788899
Q ss_pred eeEEEEeeEEecCCCCCCCcceEecC-cccEEEEeeEEec
Q 042417 77 YNLKLNDLKITAHADSPNTEGIHIGS-SNGSEISHSVIAT 115 (249)
Q Consensus 77 ~nv~I~n~~i~~~~~~~n~DGi~~~~-s~nv~I~n~~i~~ 115 (249)
+||.|+|++|.... ....|+|.+.. ++||+|++|.|..
T Consensus 103 ~NVIIrNl~i~~~~-~~~~DaI~i~~~s~nVWIDH~s~s~ 141 (326)
T 3vmv_A 103 HNIIIQNVSIHHVR-EGEGTAIEVTDDSKNVWIDHNEFYS 141 (326)
T ss_dssp EEEEEESCEEECCC-STTSCSEEEETTCEEEEEESCEEEC
T ss_pred ceEEEECeEEEcCC-CCCCCeEEEecCCCcEEEEeeEEec
Confidence 99999999999753 35689999996 8999999999963
No 49
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=97.30 E-value=0.0022 Score=57.16 Aligned_cols=92 Identities=18% Similarity=0.253 Sum_probs=60.3
Q ss_pred hHHHHHHHHHHHhhcCCCCcEEEecCCeEEE---------------EEEEecCCCceece----eEecccCeEEEE---E
Q 042417 17 DSKAFETAWREACNWDGIKSAVLVPPGKYLS---------------IRFNFLNDSTITGI----KSVDSRYFHINI---L 74 (249)
Q Consensus 17 dt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~~---------------i~~~~~~nv~i~gi----~i~ns~~~~i~~---~ 74 (249)
..+.|++|+. ...+ + +|+.-.|++.+ +.+.-.+|.+|.|. .|. ...+.+ .
T Consensus 40 t~~dL~~al~---~~~~-p-~vI~V~GtI~~~~~~~~~s~~~~~~~~~l~v~snkTI~G~G~~~~i~---g~gl~i~~~~ 111 (361)
T 1pe9_A 40 NISEFTSALS---AGAE-A-KIIQIKGTIDISGGTPYTDFADQKARSQINIPANTTVIGLGTDAKFI---NGSLIIDGTD 111 (361)
T ss_dssp SHHHHHHHHT---TTTS-C-EEEEECSEEETTTTCCCCSHHHHHHHSEEECCSSEEEEECTTCCEEE---SSEEEEEGGG
T ss_pred CHHHHHHHHh---cCCC-c-EEEEECCEEecCCccccccccccccceeEEecCCcEEEccCCCeEEe---cCEEEEecCC
Confidence 5566888872 2333 3 45555776420 12222455555543 333 356888 6
Q ss_pred ceeeEEEEeeEEecCCC-C----------CCCcceEecC-cccEEEEeeEEecC
Q 042417 75 GCYNLKLNDLKITAHAD-S----------PNTEGIHIGS-SNGSEISHSVIATG 116 (249)
Q Consensus 75 ~s~nv~I~n~~i~~~~~-~----------~n~DGi~~~~-s~nv~I~n~~i~~g 116 (249)
.++||.|+|++|....+ . ...|+|.+.. ++||+|.+|.|..+
T Consensus 112 ~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~ 165 (361)
T 1pe9_A 112 GTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDG 165 (361)
T ss_dssp TCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECT
T ss_pred CCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecc
Confidence 88999999999986432 1 2478999999 99999999999864
No 50
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=97.28 E-value=0.00086 Score=58.86 Aligned_cols=117 Identities=19% Similarity=0.178 Sum_probs=72.6
Q ss_pred hHHHHHHHHHHHhhcC--CCCcEEEecCCeEE-EEEEEe-cCCCceec-----eeEeccc----------CeEEEEEcee
Q 042417 17 DSKAFETAWREACNWD--GIKSAVLVPPGKYL-SIRFNF-LNDSTITG-----IKSVDSR----------YFHINILGCY 77 (249)
Q Consensus 17 dt~Aiq~Ai~~a~~~~--g~g~~v~iP~G~y~-~i~~~~-~~nv~i~g-----i~i~ns~----------~~~i~~~~s~ 77 (249)
|-..||+||+++ ... . .-+|+|++|+|. .+.+.. ..+++|.| ..|.... .-.+.+ .++
T Consensus 14 ~f~TIq~AI~aa-p~~~~~-~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~ 90 (317)
T 1xg2_A 14 DYQTLAEAVAAA-PDKSKT-RYVIYVKRGTYKENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAA-VGQ 90 (317)
T ss_dssp SBSSHHHHHHHS-CSSCSS-CEEEEECSEEEECCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCCSGGGCSEEE-CST
T ss_pred CcccHHHHHhhc-ccCCCc-eEEEEEcCCEEeeeeecCCCCCcEEEEEcCCCCcEEEecccccCCCcccceeEEEE-ECC
Confidence 345699999543 321 1 139999999997 222221 23344432 2232211 112333 578
Q ss_pred eEEEEeeEEecCCCC--CCCcceEecCcccEEEEeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 78 NLKLNDLKITAHADS--PNTEGIHIGSSNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 78 nv~I~n~~i~~~~~~--~n~DGi~~~~s~nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
++.++|++|.+.... ..+-+|.+. +.++.+++|.|....|.+-.. + + + -.++||.+.+.
T Consensus 91 ~f~~~~lt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~-~------------~--r-~~~~~c~I~G~ 151 (317)
T 1xg2_A 91 GFILQDICIQNTAGPAKDQAVALRVG-ADMSVINRCRIDAYQDTLYAH-S------------Q--R-QFYRDSYVTGT 151 (317)
T ss_dssp TCEEESCEEEECCCGGGCCCCSEEEC-CTTEEEESCEEECSTTCEEEC-S------------S--E-EEEESCEEEES
T ss_pred CEEEEEeEEecccCCccCceEEEEEe-CCcEEEEEeEeCccccceeec-C------------c--c-EEEEeeEEEec
Confidence 999999999875432 356678875 589999999999887777651 1 1 1 27788888877
No 51
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=97.26 E-value=0.0011 Score=58.24 Aligned_cols=117 Identities=17% Similarity=0.175 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHHhhcC--CCCcEEEecCCeEE-EEEEEe-cCCCceec-----eeEeccc----------CeEEEEEcee
Q 042417 17 DSKAFETAWREACNWD--GIKSAVLVPPGKYL-SIRFNF-LNDSTITG-----IKSVDSR----------YFHINILGCY 77 (249)
Q Consensus 17 dt~Aiq~Ai~~a~~~~--g~g~~v~iP~G~y~-~i~~~~-~~nv~i~g-----i~i~ns~----------~~~i~~~~s~ 77 (249)
|-..||+||+++ ... . .-+|+|++|+|. .+.+.. ..+++|.| ..|.... .-.+.+ .++
T Consensus 18 ~f~TIq~AI~aa-p~~~~~-~~~I~I~~G~Y~E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~ 94 (319)
T 1gq8_A 18 DYKTVSEAVAAA-PEDSKT-RYVIRIKAGVYRENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAA-VGA 94 (319)
T ss_dssp SBSSHHHHHHHS-CSSCSS-CEEEEECSEEEECCEEECTTCCSEEEEESCTTTEEEEECCCTTTTCCTGGGCSEEE-CST
T ss_pred CccCHHHHHHhc-cccCCc-eEEEEEcCCeEeeeeeccCCCccEEEEEcCCCccEEEecccccCCCCccceEEEEE-ECC
Confidence 345699999543 321 1 139999999997 233321 23344443 2232211 112333 478
Q ss_pred eEEEEeeEEecCCCC--CCCcceEecCcccEEEEeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 78 NLKLNDLKITAHADS--PNTEGIHIGSSNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 78 nv~I~n~~i~~~~~~--~n~DGi~~~~s~nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
++.++|++|.+.... ..+-+|.+. +.++.+++|.|....|.+-.. + + + ..++||.+.+.
T Consensus 95 ~f~~~nlt~~Nt~g~~~~qAvAl~v~-~d~~~f~~c~f~g~QDTLy~~-~------------~--r-~~~~~c~I~G~ 155 (319)
T 1gq8_A 95 GFLARDITFQNTAGAAKHQAVALRVG-SDLSAFYRCDILAYQDSLYVH-S------------N--R-QFFINCFIAGT 155 (319)
T ss_dssp TCEEEEEEEEECCCGGGCCCCSEEEC-CTTEEEEEEEEECSTTCEEEC-S------------S--E-EEEESCEEEES
T ss_pred CEEEEEeEeEccCCCcCCceEEEEec-CCcEEEEEeEECccceeeeec-C------------c--c-EEEEecEEEee
Confidence 999999999875432 356678875 589999999999887777651 1 1 1 37788888877
No 52
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=97.19 E-value=0.0068 Score=52.49 Aligned_cols=108 Identities=17% Similarity=0.277 Sum_probs=73.9
Q ss_pred CeeeeecCccCCCccchHHHHHHHHHHHhhcCCCCcEEEecCCeEE--EEEEEecCC-Cceec-eeEecccCeEEEEEce
Q 042417 1 VFNVKDFGAVADGIKDDSKAFETAWREACNWDGIKSAVLVPPGKYL--SIRFNFLND-STITG-IKSVDSRYFHINILGC 76 (249)
Q Consensus 1 ~~~v~dfGA~gdg~~ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~--~i~~~~~~n-v~i~g-i~i~ns~~~~i~~~~s 76 (249)
|+.++||||.++-.+||+++|.+.+. . ...|++|.|.|- .+.+.+|.= -+=.+ +.-+.+...++.+..-
T Consensus 64 vls~k~fga~~~~~~d~~~~~~~sl~-s------~~~v~i~~gvf~ss~i~~~~c~l~g~g~g~~~~~~~~gn~lvfn~p 136 (542)
T 2x3h_A 64 VLTSKPFGAAGDATTDDTEVIAASLN-S------QKAVTISDGVFSSSGINSNYCNLDGRGSGVLSHRSSTGNYLVFNNP 136 (542)
T ss_dssp BCBSSCTTCCCBSSSCCHHHHHHHHT-S------SSCEECCSEEEEECCEEESCCEEECTTTEEEEECSSSSCCEEEESC
T ss_pred eeecccccccCCcccCcHHHHHhhhc-c------cccEecccccccccccccccccccccCCceeeeecCCCCEEEEeCC
Confidence 45678999999999999999999983 1 457899999985 333333320 00011 2334455667777777
Q ss_pred eeEEEEeeEEecCCC--CCCCcceEecCcccEEEEeeEEec
Q 042417 77 YNLKLNDLKITAHAD--SPNTEGIHIGSSNGSEISHSVIAT 115 (249)
Q Consensus 77 ~nv~I~n~~i~~~~~--~~n~DGi~~~~s~nv~I~n~~i~~ 115 (249)
+.-.+.+++|.+... .....-+.+....+|.+.|..|.+
T Consensus 137 ~~g~ls~~ti~~nk~~ds~qg~qvs~~gg~dvsv~~i~fsn 177 (542)
T 2x3h_A 137 RTGRLSNITVESNKATDTTQGQQVSLAGGSDVTVSDVNFSN 177 (542)
T ss_dssp EEEEEEEEEEECCCSSTTCBCCSEEEESCEEEEEEEEEEEE
T ss_pred CCcceeeEEEecccCCccccceEEEecCCCcceEeeeeeee
Confidence 888889999987532 223333556677889999988877
No 53
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=97.16 E-value=0.0014 Score=59.55 Aligned_cols=49 Identities=20% Similarity=0.215 Sum_probs=40.1
Q ss_pred CeEEEEEceeeEEEEeeEEecCCC---------------CCCCcceEecCcccEEEEeeEEecC
Q 042417 68 YFHINILGCYNLKLNDLKITAHAD---------------SPNTEGIHIGSSNGSEISHSVIATG 116 (249)
Q Consensus 68 ~~~i~~~~s~nv~I~n~~i~~~~~---------------~~n~DGi~~~~s~nv~I~n~~i~~g 116 (249)
...+.+..++||.|+|++|....+ ..+.|+|.+..++||+|.+|.|..+
T Consensus 147 g~gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~ 210 (416)
T 1vbl_A 147 GGGFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDG 210 (416)
T ss_dssp SCEEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECT
T ss_pred cCEEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecC
Confidence 356788889999999999986432 1357999999999999999999865
No 54
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=97.14 E-value=0.0033 Score=55.96 Aligned_cols=101 Identities=17% Similarity=0.165 Sum_probs=70.3
Q ss_pred EEEEEecCCCceeceeEeccc---------------CeEEEEEceeeEEEEeeEEecCCC---------CC---CCcc-e
Q 042417 47 SIRFNFLNDSTITGIKSVDSR---------------YFHINILGCYNLKLNDLKITAHAD---------SP---NTEG-I 98 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~---------------~~~i~~~~s~nv~I~n~~i~~~~~---------~~---n~DG-i 98 (249)
.|.+.+++||.|++|+|++.. ...|.+..++||-|++|++....+ .+ -.|| +
T Consensus 97 gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~~s~nVWIDH~s~s~~~~~d~~~~~~~G~~~~~~Dgl~ 176 (355)
T 1pcl_A 97 SLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVIDNSTNVWVDHVTISDGSFTDDKYTTKDGEKYVQHDGAL 176 (355)
T ss_pred EEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEecCCCcEEEEeeEEeccccCccccccccCccccccccce
Confidence 477788999999999999641 346888999999999999985311 11 1466 4
Q ss_pred Eec-CcccEEEEeeEEecCCCeeEeCcceEEccCCCCC-CCCceEeEEEEeeEEEcc
Q 042417 99 HIG-SSNGSEISHSVIATGDDCVSLGHGISVGSLGKGI-NDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 99 ~~~-~s~nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~-~~~~v~ni~v~n~~~~~~ 153 (249)
|+. .+++|+|.+|+|...+.+ +-+|+.-... ...+-.+|++.++.|.+.
T Consensus 177 Di~~~s~~VTiS~n~f~~h~k~------~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 227 (355)
T 1pcl_A 177 DIKKGSDYVTISYSRFELHDKT------ILIGHSDSNGSQDSGKLRVTFHNNVFDRV 227 (355)
T ss_pred eeecCCCcEEEEeeEEcCCCce------EEeCCCCCCcccccCcceEEEECcEEeCC
Confidence 565 689999999999865533 3344331111 112345789999988876
No 55
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=97.09 E-value=0.0015 Score=58.00 Aligned_cols=95 Identities=13% Similarity=0.157 Sum_probs=69.4
Q ss_pred EEEEEecCCCceeceeEeccc----------------------CeEEEEEceeeEEEEeeEEecCCCCCCCcce-Ee-cC
Q 042417 47 SIRFNFLNDSTITGIKSVDSR----------------------YFHINILGCYNLKLNDLKITAHADSPNTEGI-HI-GS 102 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~----------------------~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi-~~-~~ 102 (249)
.|.+..++|+.|++++|++.. ...|.+..+++|-|+++++.. ..||+ ++ ..
T Consensus 107 gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~~s~nVwIDHcs~s~-----~~Dg~id~~~~ 181 (346)
T 1pxz_A 107 CLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMRNVTNAWIDHNSLSD-----CSDGLIDVTLG 181 (346)
T ss_dssp CEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEESCEEEEEESCEEEC-----CSSEEEEEESS
T ss_pred eEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEecCceEEEEeeEEec-----CCCCcEeeccC
Confidence 366778999999999998641 235888999999999999986 46886 77 57
Q ss_pred cccEEEEeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEE-Ecc
Q 042417 103 SNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTF-TGT 153 (249)
Q Consensus 103 s~nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~-~~~ 153 (249)
+++|+|++|.|...+. ++-+|+.-.. ......+|++.++.| .+.
T Consensus 182 s~~vTISnn~f~~H~k------~~l~G~sd~~-~~d~~~~vT~~~N~f~~~~ 226 (346)
T 1pxz_A 182 STGITISNNHFFNHHK------VMLLGHDDTY-DDDKSMKVTVAFNQFGPNA 226 (346)
T ss_dssp CEEEEEESCEEESEEE------EEEESCCSSC-GGGGGCEEEEESCEECSSE
T ss_pred cceEEEEeeEEecCCc------eeEECCCCcc-ccCCceEEEEEeeEEeCCc
Confidence 8999999999985432 4455543211 112235788888888 554
No 56
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=97.08 E-value=0.0023 Score=59.63 Aligned_cols=69 Identities=13% Similarity=0.157 Sum_probs=44.4
Q ss_pred chHHHHHHHHHHHhhcCCCCcEEEecCCeEE--------------EEEEEe-----------------cCCCceeceeEe
Q 042417 16 DDSKAFETAWREACNWDGIKSAVLVPPGKYL--------------SIRFNF-----------------LNDSTITGIKSV 64 (249)
Q Consensus 16 ddt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~--------------~i~~~~-----------------~~nv~i~gi~i~ 64 (249)
.+.+.||+|++.| + + |.+|++++|+|. .|.+.. .++++|+|++|+
T Consensus 29 ~~~~~Lq~Ai~~A-~-p--GDtI~L~~GtY~~~~i~i~~sGt~~~pItl~~~~~~~~vi~G~~~l~i~g~~v~i~GL~i~ 104 (506)
T 1dbg_A 29 ASNETLYQVVKEV-K-P--GGLVQIADGTYKDVQLIVSNSGKSGLPITIKALNPGKVFFTGDAKVELRGEHLILEGIWFK 104 (506)
T ss_dssp CSHHHHHHHHHHC-C-T--TCEEEECSEEEETCEEEECCCCBTTBCEEEEESSTTSEEEEESCEEEECSSSEEEESCEEE
T ss_pred CCHHHHHHHHHhC-C-C--CCEEEECCCEEecceEEEecCCcCCCCEEEECCCCCccEEeCCceEEEEcCCEEEECeEEE
Confidence 4677899999643 2 3 689999999996 122211 456778888887
Q ss_pred cccC----e------EEEEEceeeEEEEeeEEecC
Q 042417 65 DSRY----F------HINILGCYNLKLNDLKITAH 89 (249)
Q Consensus 65 ns~~----~------~i~~~~s~nv~I~n~~i~~~ 89 (249)
++.. + .+.+. .++++|++++|...
T Consensus 105 ~~~~~~~~~~~~~~~~iav~-G~~~~I~nn~I~~~ 138 (506)
T 1dbg_A 105 DGNRAIQAWKSHGPGLVAIY-GSYNRITACVFDCF 138 (506)
T ss_dssp EECCCTTTCCTTSCCSEEEC-SSSCEEESCEEESC
T ss_pred CCCcceeeeecccccceEEe-cCCeEEEeeEEEcC
Confidence 7542 1 11222 36777888888753
No 57
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=97.04 E-value=0.0034 Score=56.07 Aligned_cols=120 Identities=13% Similarity=0.179 Sum_probs=73.8
Q ss_pred hHHHHHHHHHHHhhcCCCCcEEEecCCeEE-EEEEEecCCCceec-----eeEeccc----------Ce-----EEEEEc
Q 042417 17 DSKAFETAWREACNWDGIKSAVLVPPGKYL-SIRFNFLNDSTITG-----IKSVDSR----------YF-----HINILG 75 (249)
Q Consensus 17 dt~Aiq~Ai~~a~~~~g~g~~v~iP~G~y~-~i~~~~~~nv~i~g-----i~i~ns~----------~~-----~i~~~~ 75 (249)
+-..||+||+.+-.... ..+|+|++|+|. .+.+. ..++++.| ..|.... .+ ......
T Consensus 43 ~f~TIq~Ai~aa~~~~~-~~~I~I~~G~Y~E~v~I~-k~~itl~G~g~~~TiIt~~~~~~~~~~~g~~~gt~~saTv~V~ 120 (364)
T 3uw0_A 43 EFSSINAALKSAPKDDT-PFIIFLKNGVYTERLEVA-RSHVTLKGENRDGTVIGANTAAGMLNPQGEKWGTSGSSTVLVN 120 (364)
T ss_dssp -CCCHHHHHHHSCSSSS-CEEEEECSEEECCCEEEC-STTEEEEESCTTTEEEEECCCTTSBCTTCSBCCTTTCCSEEEC
T ss_pred CcccHHHHHhhcccCCC-cEEEEEeCCEEEEEEEEc-CCeEEEEecCCCCeEEEccccccccccccccccccCeeEEEEE
Confidence 33569999954321112 249999999997 23332 23455544 2222110 01 123346
Q ss_pred eeeEEEEeeEEecCCC----------------CCCCcceEec-CcccEEEEeeEEecCCCeeEeCcceEEccCCCCCCCC
Q 042417 76 CYNLKLNDLKITAHAD----------------SPNTEGIHIG-SSNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDE 138 (249)
Q Consensus 76 s~nv~I~n~~i~~~~~----------------~~n~DGi~~~-~s~nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~ 138 (249)
++++.++|++|.+... ...+-++.+. .+.+..+.+|.|....|.+-.. +
T Consensus 121 a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G~QDTLy~~-~------------- 186 (364)
T 3uw0_A 121 APNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEGYQDTLYSK-T------------- 186 (364)
T ss_dssp STTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEECSBSCEEEC-T-------------
T ss_pred CCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEecccceEeC-C-------------
Confidence 7899999999987642 1244567765 4689999999999877777651 0
Q ss_pred ceEeEEEEeeEEEcc
Q 042417 139 EVVGLTVRNCTFTGT 153 (249)
Q Consensus 139 ~v~ni~v~n~~~~~~ 153 (249)
--...++||.++++
T Consensus 187 -~gr~yf~~c~I~Gt 200 (364)
T 3uw0_A 187 -GSRSYFSDCEISGH 200 (364)
T ss_dssp -TCEEEEESCEEEES
T ss_pred -CCCEEEEcCEEEcC
Confidence 01467888888887
No 58
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=96.90 E-value=0.017 Score=51.32 Aligned_cols=97 Identities=15% Similarity=0.073 Sum_probs=68.6
Q ss_pred EEEEEecCCCceeceeEeccc-----CeEEEEEceeeEEEEeeEEecCCCC--------CCCcc-eEec-CcccEEEEee
Q 042417 47 SIRFNFLNDSTITGIKSVDSR-----YFHINILGCYNLKLNDLKITAHADS--------PNTEG-IHIG-SSNGSEISHS 111 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~-----~~~i~~~~s~nv~I~n~~i~~~~~~--------~n~DG-i~~~-~s~nv~I~n~ 111 (249)
.|.+.+++||.|++|+|+..+ ...|.+..++||-|++|.+....+. +..|| +|+. .+++|+|.+|
T Consensus 104 gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~~s~nVWIDH~s~s~~~~~~~g~~~~~~~~DGl~di~~~s~~VTISnn 183 (353)
T 1air_A 104 GIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVDDSPNVWVDHNELFAANHECDGTPDNDTTFESAVDIKGASNTVTVSYN 183 (353)
T ss_dssp EEEEESCCSEEEESCEEESCSCGGGTCCSEEEESCCSEEEESCEEECCSCCCTTCGGGCCSSCCSEEEESSCCEEEEESC
T ss_pred eEEEeccCcEEEeccEEEeCCCCCCCCCeEEeeCCCcEEEEeeEEecCCcccccccccccccccceeeecccCcEEEEee
Confidence 577778999999999999654 3568899999999999999753211 12366 4664 6899999999
Q ss_pred EEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 112 VIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 112 ~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
.|...+. ++-+|+.-. ... .+|+|.++.|.+.
T Consensus 184 ~f~~h~k------~~LiG~sd~---~~g-~~vT~hhN~f~~~ 215 (353)
T 1air_A 184 YIHGVKK------VGLDGSSSS---DTG-RNITYHHNYYNDV 215 (353)
T ss_dssp EEEEEEE------CCEESSSTT---CCC-CEEEEESCEEEEE
T ss_pred EEcCCCc------eeEECCCcC---CCC-ceEEEEceEEcCC
Confidence 9985332 233454311 112 6888888888765
No 59
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=96.87 E-value=0.0045 Score=54.71 Aligned_cols=96 Identities=17% Similarity=0.172 Sum_probs=69.8
Q ss_pred EEEEEecCCCceeceeEecc-----------cCeEEEEEceeeEEEEeeEEecCCCCCCCcc-eEec-CcccEEEEeeEE
Q 042417 47 SIRFNFLNDSTITGIKSVDS-----------RYFHINILGCYNLKLNDLKITAHADSPNTEG-IHIG-SSNGSEISHSVI 113 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns-----------~~~~i~~~~s~nv~I~n~~i~~~~~~~n~DG-i~~~-~s~nv~I~n~~i 113 (249)
.|.+.+++|+.|++++|++. ....|.+..++||-|++|.+.. ..|| +++. .+++|+|.+|.|
T Consensus 84 Gi~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~-----~~Dg~idi~~~s~~vTISnn~f 158 (340)
T 3zsc_A 84 GLVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVENSHHIWIDHITFVN-----GNDGAVDIKKYSNYITVSWNKF 158 (340)
T ss_dssp EEEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEESCEEEEEESCEEES-----CSSCSEEEETTCEEEEEESCEE
T ss_pred ceEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEecCCcEEEEeeeecc-----CCccceEEecCCceEEEECcEe
Confidence 57778899999999999985 3456999999999999999986 3677 6776 589999999999
Q ss_pred ecCCCeeEeCcceEEccCCCCC--CCCceEeEEEEeeEEEcc
Q 042417 114 ATGDDCVSLGHGISVGSLGKGI--NDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 114 ~~gDD~i~ig~Gi~iGs~g~~~--~~~~v~ni~v~n~~~~~~ 153 (249)
...+.. +-+|+.-..+ ...+-.+|++.++.|.+.
T Consensus 159 ~~h~k~------~LiG~sd~~~~~~d~g~~~vT~hhN~f~~~ 194 (340)
T 3zsc_A 159 VDHDKV------SLVGSSDKEDPEQAGQAYKVTYHHNYFKNL 194 (340)
T ss_dssp ESCSBC------CEECCCTTSCHHHHHHSCEEEEESCEEESC
T ss_pred ccCcee------eEeCcCCCCccccccCCcEEEEECeEecCC
Confidence 865433 3344321100 001234788888888776
No 60
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=96.72 E-value=0.017 Score=51.15 Aligned_cols=118 Identities=13% Similarity=0.187 Sum_probs=72.5
Q ss_pred hHHHHHHHHHHHhhcC-CCCcEEEecCCeEE-EEEEEecCCCceec-----eeEeccc----------Ce-----EEEEE
Q 042417 17 DSKAFETAWREACNWD-GIKSAVLVPPGKYL-SIRFNFLNDSTITG-----IKSVDSR----------YF-----HINIL 74 (249)
Q Consensus 17 dt~Aiq~Ai~~a~~~~-g~g~~v~iP~G~y~-~i~~~~~~nv~i~g-----i~i~ns~----------~~-----~i~~~ 74 (249)
+-..||+||+ +.... . .-+|+|++|+|. .+.+ ...+++|.| ..|.... .+ .....
T Consensus 17 ~f~TIq~Ai~-aap~~~~-~~~I~I~~G~Y~E~V~I-~k~~Itl~G~g~~~tiI~~~~~~~~~~~~g~~~gT~~satv~v 93 (342)
T 2nsp_A 17 TFKTIADAIA-SAPAGST-PFVILIKNGVYNERLTI-TRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITI 93 (342)
T ss_dssp CBSSHHHHHH-TSCSSSS-CEEEEECSEEEECCEEE-CSTTEEEEESCTTTEEEEECCCTTCBCTTSCBCHHHHTCSEEE
T ss_pred CcchHHHHHH-hcccCCC-cEEEEEeCCEEEEEEEE-ecCeEEEEecCCCCeEEEecccccccccccCcccccceeEEEE
Confidence 4456999995 43321 1 239999999998 3333 224555553 2232110 01 12233
Q ss_pred ceeeEEEEeeEEecCCC----------------CCCCcceEe-cCcccEEEEeeEEecCCCeeEeCcceEEccCCCCCCC
Q 042417 75 GCYNLKLNDLKITAHAD----------------SPNTEGIHI-GSSNGSEISHSVIATGDDCVSLGHGISVGSLGKGIND 137 (249)
Q Consensus 75 ~s~nv~I~n~~i~~~~~----------------~~n~DGi~~-~~s~nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~ 137 (249)
.++++.++|++|.+... ...+-++.+ ..+.++.+++|.|....|.+-.. +
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G~QDTLy~~-~------------ 160 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQATLYVS-G------------ 160 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEECSTTCEEEC-S------------
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEecccceEEEC-C------------
Confidence 57899999999987541 123446622 23689999999999987777651 1
Q ss_pred CceEeEEEEeeEEEcc
Q 042417 138 EEVVGLTVRNCTFTGT 153 (249)
Q Consensus 138 ~~v~ni~v~n~~~~~~ 153 (249)
+ ...++||.++++
T Consensus 161 g---r~~~~~c~I~G~ 173 (342)
T 2nsp_A 161 G---RSFFSDCRISGT 173 (342)
T ss_dssp S---EEEEESCEEEES
T ss_pred C---CEEEEcCEEEec
Confidence 1 467888888887
No 61
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=96.58 E-value=0.0044 Score=56.25 Aligned_cols=101 Identities=18% Similarity=0.234 Sum_probs=69.0
Q ss_pred EEEEEecCCCceeceeEeccc-------------------CeEEEEEceeeEEEEeeEEecCCCC------------CCC
Q 042417 47 SIRFNFLNDSTITGIKSVDSR-------------------YFHINILGCYNLKLNDLKITAHADS------------PNT 95 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~-------------------~~~i~~~~s~nv~I~n~~i~~~~~~------------~n~ 95 (249)
.|.+.+++||.|++|+|++.. ...|.+..++||-|++|++....+. .-.
T Consensus 149 gl~i~~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~Gr~~~~~ 228 (416)
T 1vbl_A 149 GFLIKNVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIEGSSHIWIDHNTFTDGDHPDRSLGTYFGRPFQQH 228 (416)
T ss_dssp EEEEESCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeecCceEEEeCeEEEcCccccccccccccccccccCCCceEEecCCceEEEEccEEecCCCcccccccccCcceeec
Confidence 577778999999999998641 2358899999999999999853210 014
Q ss_pred cc-eEec-CcccEEEEeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 96 EG-IHIG-SSNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 96 DG-i~~~-~s~nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
|| +|+. .+++|+|.+|+|...+. ++-+|+.-......+-.+|+|.++.|.+.
T Consensus 229 DGl~Di~~~s~~VTISnn~f~~h~k------~~LiG~sd~~~~d~g~~~VT~hhN~f~~~ 282 (416)
T 1vbl_A 229 DGALDIKNSSDFITISYNVFTNHDK------VTLIGASDSRMADSGHLRVTLHHNYYKNV 282 (416)
T ss_dssp CCSEEEESSCEEEEEESCEEEEEEE------CCEECSCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccceeeecCCCcEEEEeeEEcCCCc------eeEeCCCCCCcccCCceEEEEECcEecCC
Confidence 66 4665 68999999999986432 33445431111112234688888888765
No 62
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=96.58 E-value=0.034 Score=48.87 Aligned_cols=100 Identities=11% Similarity=0.048 Sum_probs=68.4
Q ss_pred EEEEE-ecCCCceeceeEeccc----CeEEEEE-----ceeeEEEEeeEEecCCCC------CCCcc-eEec-CcccEEE
Q 042417 47 SIRFN-FLNDSTITGIKSVDSR----YFHINIL-----GCYNLKLNDLKITAHADS------PNTEG-IHIG-SSNGSEI 108 (249)
Q Consensus 47 ~i~~~-~~~nv~i~gi~i~ns~----~~~i~~~-----~s~nv~I~n~~i~~~~~~------~n~DG-i~~~-~s~nv~I 108 (249)
.|.+. +++||.|++|+|++.. ...|.+. .++||-|++|++....+. .--|| +|+. .+++|+|
T Consensus 87 gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~g~~~~~s~nVWIDH~s~s~~~~~~~~~~~~~~Dg~idi~~~s~~VTI 166 (330)
T 2qy1_A 87 GIRVVGNAHNVIIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWVDHNTVFASLTKCSGAGDASFDGGIDMKKGVHHVTV 166 (330)
T ss_dssp EEEEESSCEEEEEESCEEESCSSGGGCCSEEEECBTTBCCEEEEEESCEEECCCCCCTTCTTCSSCCSEEEESSCEEEEE
T ss_pred eEEEeCCCCeEEEeCeEEeCCCCCCCCcceeeccccCcccccEEEEeEEEEccccccccCCcceeecccccccCcceEEE
Confidence 57887 8999999999999864 4668888 599999999999642210 11255 5665 5899999
Q ss_pred EeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 109 SHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 109 ~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
.+|.|...+. ++-+|+.-.... ....+|++.++.|.+.
T Consensus 167 Snn~f~~h~k------~~L~G~sd~~~~-~~~~~vT~h~N~f~~~ 204 (330)
T 2qy1_A 167 SYNYVYNYQK------VALNGYSDSDTK-NSAARTTYHHNRFENV 204 (330)
T ss_dssp ESCEEEEEEE------CCEESSSTTCGG-GGGCEEEEESCEEEEE
T ss_pred EcceeccCCe------EEEECCCCcccc-CCCceEEEECcEEcCC
Confidence 9999985432 233444311111 1125788888888765
No 63
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=96.43 E-value=0.0077 Score=53.65 Aligned_cols=65 Identities=12% Similarity=0.076 Sum_probs=50.3
Q ss_pred EEEEE-ecCCCceeceeEecc------cCeEEEEEceeeEEEEeeEEecCCCCCCCcceE---ecCcccEEEEeeEEecC
Q 042417 47 SIRFN-FLNDSTITGIKSVDS------RYFHINILGCYNLKLNDLKITAHADSPNTEGIH---IGSSNGSEISHSVIATG 116 (249)
Q Consensus 47 ~i~~~-~~~nv~i~gi~i~ns------~~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~---~~~s~nv~I~n~~i~~g 116 (249)
.|.+. +++||.|++|+|++. ....|.+..++||-|+++++... .|++. ...+++|+|.+|.|...
T Consensus 125 gl~i~~~a~NVIIrnL~i~~~~~~~~~g~DaI~i~~s~nVwIDHcs~s~~-----~d~~~~~g~~~s~~VTISnn~f~~~ 199 (359)
T 1idk_A 125 GLRIVSGAENIIIQNIAVTDINPKYVWGGDAITLDDCDLVWIDHVTTARI-----GRQHYVLGTSADNRVSLTNNYIDGV 199 (359)
T ss_dssp CEEECTTCEEEEEESCEEEEECTTEETSCCSEEECSCEEEEEESCEEEEE-----SSCSEEECCCTTCEEEEESCEEECB
T ss_pred eEEEecCCCcEEEeCeEEEcccccccccCCceeecCCCcEEEEeeEeecC-----CCCcEEecccCcceEEEECcEecCC
Confidence 35665 689999999999973 23568888999999999999853 33433 34689999999999743
No 64
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=96.17 E-value=0.073 Score=46.69 Aligned_cols=99 Identities=14% Similarity=0.135 Sum_probs=68.9
Q ss_pred EEEEEecCCCceeceeEeccc---CeEEEEEc-eeeEEEEeeEEecCC----CCCCCcc-eEec-CcccEEEEeeEEecC
Q 042417 47 SIRFNFLNDSTITGIKSVDSR---YFHINILG-CYNLKLNDLKITAHA----DSPNTEG-IHIG-SSNGSEISHSVIATG 116 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~---~~~i~~~~-s~nv~I~n~~i~~~~----~~~n~DG-i~~~-~s~nv~I~n~~i~~g 116 (249)
.|.+.+++|+.|++++|++.. ...|.+.. ++||-|++|++.... +..-.|| +|+. .+.+|+|.+|.|...
T Consensus 96 gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~~~s~nVWIDH~s~s~~~~g~~~~~~~Dgl~di~~~s~~VTISnn~f~~h 175 (326)
T 3vmv_A 96 GIRLSNAHNIIIQNVSIHHVREGEGTAIEVTDDSKNVWIDHNEFYSEFPGNGDSDYYDGLVDMKRNAEYITVSWNKFENH 175 (326)
T ss_dssp CEEEESEEEEEEESCEEECCCSTTSCSEEEETTCEEEEEESCEEECCSSTTSCTTSSCCSEEECTTCEEEEEESCEEEEE
T ss_pred EEEEEecceEEEECeEEEcCCCCCCCeEEEecCCCcEEEEeeEEeccccCCcCccccCcceEecCCCceEEEEceEEecC
Confidence 477778999999999999864 45689986 999999999997421 1122465 4664 479999999999853
Q ss_pred CCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 117 DDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 117 DD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
+ .++-+|+.-... ..-.+|++.++.|.+.
T Consensus 176 ~------k~~LiG~sd~~~--~~~~~vT~~~N~f~~~ 204 (326)
T 3vmv_A 176 W------KTMLVGHTDNAS--LAPDKITYHHNYFNNL 204 (326)
T ss_dssp E------ECEEECSSSCGG--GCCEEEEEESCEEEEE
T ss_pred c------eEEEECCCCCCc--ccCccEEEEeeEecCC
Confidence 2 234555431110 0124788888888765
No 65
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=95.96 E-value=0.013 Score=52.98 Aligned_cols=100 Identities=15% Similarity=0.223 Sum_probs=67.7
Q ss_pred EEEEEecCCCceeceeEeccc-------------------CeEEEEEceeeEEEEeeEEecCCCC------------CCC
Q 042417 47 SIRFNFLNDSTITGIKSVDSR-------------------YFHINILGCYNLKLNDLKITAHADS------------PNT 95 (249)
Q Consensus 47 ~i~~~~~~nv~i~gi~i~ns~-------------------~~~i~~~~s~nv~I~n~~i~~~~~~------------~n~ 95 (249)
.|.+.. +||.|++|+|++.. ...|.+..++||-|++|++....+. .-.
T Consensus 144 gl~i~~-~NVIIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~~s~nVWIDHcs~s~~~~~d~~~~~~~G~~~~~~ 222 (399)
T 2o04_A 144 NFQIKS-DNVIIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITINGGTHIWIDHCTFNDGSRPDSTSPKYYGRKYQHH 222 (399)
T ss_dssp EEEECS-EEEEEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEESCEEEEEESCEEECTTCCGGGSCEETTEECCCC
T ss_pred EEEeeC-CCEEEeCeEEecCccccccccccccccccccCCCCeEEecCCCcEEEEeeeeecCCCccccccccccceeecc
Confidence 577777 99999999998641 2348889999999999999853210 014
Q ss_pred cc-eEec-CcccEEEEeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 96 EG-IHIG-SSNGSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 96 DG-i~~~-~s~nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
|| +|+. .+++|+|.+|.|...+. ++-+|+.-......+-.+|+|.++.|.+.
T Consensus 223 Dgl~Di~~~s~~VTISnn~f~~h~k------~~LiG~sd~~~~d~g~~~vT~h~N~f~~~ 276 (399)
T 2o04_A 223 DGQTDASNGANYITMSYNYYHDHDK------SSIFGSSDSKTSDDGKLKITLHHNRYKNI 276 (399)
T ss_dssp CCSEEEETTCEEEEEESCEEEEEEE------CCEESCCTTCGGGTTCCCEEEESCEEEEE
T ss_pred ccceeeeccCCcEEEEeeEEcCCCc------eeEeCCCCCCccccCceeEEEECcEecCC
Confidence 66 4665 68999999999986432 34455431111112244788888888765
No 66
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=95.94 E-value=0.025 Score=50.38 Aligned_cols=64 Identities=16% Similarity=0.048 Sum_probs=50.2
Q ss_pred EEEE-ecCCCceeceeEeccc------CeEEEEEceeeEEEEeeEEecCCCCCCCcceE---ecCcccEEEEeeEEecC
Q 042417 48 IRFN-FLNDSTITGIKSVDSR------YFHINILGCYNLKLNDLKITAHADSPNTEGIH---IGSSNGSEISHSVIATG 116 (249)
Q Consensus 48 i~~~-~~~nv~i~gi~i~ns~------~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~---~~~s~nv~I~n~~i~~g 116 (249)
|.+. +++||.|++|+|++.. ...|.+..+++|-|+++++... .|+.. ...+++|+|.+|.|...
T Consensus 126 l~i~~~a~NVIIrnl~i~~~~~~~~~~~DaI~i~~s~nvwIDHcs~s~~-----~d~~~~~~~~~s~~vTISnn~f~~~ 199 (359)
T 1qcx_A 126 LRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARI-----GRQHIVLGTSADNRVTISYSLIDGR 199 (359)
T ss_dssp EEEETTCCCEEEESCEEEEECTTEETSCCSEEEESCCCEEEESCEEEEE-----SSCSEEECSSCCEEEEEESCEEECB
T ss_pred EEEecCCCCEEEeCcEEEecCCcccccCceeEecCCceEEEEeeEeecc-----CcCceeecccccccEEEECcEecCC
Confidence 5666 7899999999999753 2468888999999999999853 34432 33689999999999753
No 67
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=95.36 E-value=0.021 Score=50.92 Aligned_cols=101 Identities=19% Similarity=0.235 Sum_probs=68.4
Q ss_pred EEEE---EecCCCceeceeEeccc---------------CeEEEEEc-eeeEEEEeeEEecCCCC----C--------CC
Q 042417 47 SIRF---NFLNDSTITGIKSVDSR---------------YFHINILG-CYNLKLNDLKITAHADS----P--------NT 95 (249)
Q Consensus 47 ~i~~---~~~~nv~i~gi~i~ns~---------------~~~i~~~~-s~nv~I~n~~i~~~~~~----~--------n~ 95 (249)
.|.+ .+++||.|++|+|++.. ...|.+.. ++||-|++|++....+. | -.
T Consensus 104 gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~~~s~nVWIDHcs~s~~~~~~~~~~~~~G~~~~~~ 183 (361)
T 1pe9_A 104 SLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNITNGAHHVWIDHVTISDGNFTDDMYTTKDGETYVQH 183 (361)
T ss_dssp EEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEETTCEEEEEESCEEECTTSCGGGCCEETTEECCCC
T ss_pred EEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEeecCCceEEEEccEeecccccccccccccCcceeec
Confidence 5788 57999999999999631 23588999 99999999999853210 0 14
Q ss_pred cc-eEec-CcccEEEEeeEEecCCCeeEeCcceEEccCCCCC-CCCceEeEEEEeeEEEcc
Q 042417 96 EG-IHIG-SSNGSEISHSVIATGDDCVSLGHGISVGSLGKGI-NDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 96 DG-i~~~-~s~nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~-~~~~v~ni~v~n~~~~~~ 153 (249)
|| ||+. .+++|+|.+|+|..-+. ++-+|+.-... ...+-.+|++.++.|.+.
T Consensus 184 DgllDi~~~s~~VTiS~n~f~~h~k------~~LiG~sd~~~~~d~g~~~vT~hhN~f~~~ 238 (361)
T 1pe9_A 184 DGALDIKRGSDYVTISNSLIDQHDK------TMLIGHSDSNGSQDKGKLHVTLFNNVFNRV 238 (361)
T ss_dssp CCSEEECTTCEEEEEESCEEEEEEE------CEEESCCTTCHHHHTTCCEEEEESCEEEEE
T ss_pred cceeeeecCCCcEEEEeeEEcCCCc------eeEecCCCCCcccccCcceEEEECeEEcCc
Confidence 66 5675 58999999999985332 34445431110 001234688888888765
No 68
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=93.80 E-value=1.1 Score=40.53 Aligned_cols=74 Identities=14% Similarity=0.166 Sum_probs=48.8
Q ss_pred EceeeEEEEeeEEecCCC------CCCCcceEecCcccEEEEeeEEecCCCeeEeCc-ceEEccCCCCCCCCceEeEEEE
Q 042417 74 LGCYNLKLNDLKITAHAD------SPNTEGIHIGSSNGSEISHSVIATGDDCVSLGH-GISVGSLGKGINDEEVVGLTVR 146 (249)
Q Consensus 74 ~~s~nv~I~n~~i~~~~~------~~n~DGi~~~~s~nv~I~n~~i~~gDD~i~ig~-Gi~iGs~g~~~~~~~v~ni~v~ 146 (249)
..++++.++|++|.+... ...+-++.+.+ ....+.+|.|....|-+..+. |. .... .....-.-+++
T Consensus 198 V~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v~g-Dr~~fy~C~f~G~QDTLy~~~~~~----~~~~-~~d~~gRqyy~ 271 (422)
T 3grh_A 198 SQNNGLQLQNLTIENTLGDSVDAGNHPAVALRTDG-DQVQINNVNILGRQNTFFVTNSGV----QNRL-ETNRQPRTLVT 271 (422)
T ss_dssp ECCTTCEEEEEEEEETTGGGSCSSCCCCCSEEECC-SSEEEEEEEEECSTTCEEECCCCT----TCSC-CSSCCCEEEEE
T ss_pred EECCCEEEEeeEEEeCCCCCCCCCCCceEEEEecC-CcEEEEeeEEEeecceeeeccccc----cccc-cccccccEEEE
Confidence 356789999999987532 13455666654 899999999999888776521 10 0000 01123357899
Q ss_pred eeEEEcc
Q 042417 147 NCTFTGT 153 (249)
Q Consensus 147 n~~~~~~ 153 (249)
||.++++
T Consensus 272 ~CyIeGt 278 (422)
T 3grh_A 272 NSYIEGD 278 (422)
T ss_dssp SCEEEES
T ss_pred ecEEecc
Confidence 9999998
No 69
>2vbk_A Tailspike-protein; viral adhesion protein, viral protein, hydrolase, endorhamnosidase, right-handed parallel beta-helix; 1.25A {Enterobacteria phage SF6} PDB: 2vbe_A 2vbm_A*
Probab=92.78 E-value=0.092 Score=47.78 Aligned_cols=69 Identities=13% Similarity=0.179 Sum_probs=47.1
Q ss_pred EecCCeEEEEEEEecCCCcee-ceeEecccCeEEEEEceeeEEEEeeEEecCCCC----------------C----CCcc
Q 042417 39 LVPPGKYLSIRFNFLNDSTIT-GIKSVDSRYFHINILGCYNLKLNDLKITAHADS----------------P----NTEG 97 (249)
Q Consensus 39 ~iP~G~y~~i~~~~~~nv~i~-gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~~----------------~----n~DG 97 (249)
+...|.| .+++..|++++++ +|.+. .+|+||.|.||.|+..++. + ..-+
T Consensus 190 v~~Sg~W-TIhPi~Cqnvt~r~gL~f~---------eSCrNV~IsnC~FsVGDdciaiksGk~~~~~~~~~~se~~~hga 259 (514)
T 2vbk_A 190 YLMQGLW-HSKFIACQAGTCRVGLHFL---------GQCVSVSVSSCHFSRGNYSADESFGIRIQPQTYAWSSEAVRSEA 259 (514)
T ss_dssp EEEESEE-EEEEESCEEEEEEEEEEEE---------SCCEEEEEESCEEECTTSCCTTCEEEEEECBCCTTTSSCBCCEE
T ss_pred EeccCcE-EEeEeccCceecccCcccc---------CCCCeEEEeccEEecCcceeeeecCceecccccCCcchhccccc
Confidence 3345656 7888888888877 55554 3799999999999987652 0 2234
Q ss_pred eEecC------ccc-EEEEeeEEecCC
Q 042417 98 IHIGS------SNG-SEISHSVIATGD 117 (249)
Q Consensus 98 i~~~~------s~n-v~I~n~~i~~gD 117 (249)
+-+.+ -+| +.|++|.|...|
T Consensus 260 v~igSE~m~~Gvk~~v~v~~Clf~~td 286 (514)
T 2vbk_A 260 IILDSETMCIGFKNAVYVHDCLDLHME 286 (514)
T ss_dssp EEEESSEEEESCSEEEEESCCEEEEEE
T ss_pred EEECchhhcccccccEEEEeeeccCCc
Confidence 44443 146 888888887654
No 70
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=91.46 E-value=0.39 Score=43.15 Aligned_cols=83 Identities=10% Similarity=0.122 Sum_probs=48.5
Q ss_pred CcEEEecC--CeEEEEEEEec-----CCCceeceeEecc-----c------CeEEEEEc-eeeEEEEeeEEecCCCCCCC
Q 042417 35 KSAVLVPP--GKYLSIRFNFL-----NDSTITGIKSVDS-----R------YFHINILG-CYNLKLNDLKITAHADSPNT 95 (249)
Q Consensus 35 g~~v~iP~--G~y~~i~~~~~-----~nv~i~gi~i~ns-----~------~~~i~~~~-s~nv~I~n~~i~~~~~~~n~ 95 (249)
|++|.+-+ +.--.+.+... +++++++++|++. . .-.|.+.. ++++.|+++.|.. +-
T Consensus 110 Gs~I~V~a~~~~g~a~~V~~~g~~r~s~V~~~~v~I~G~~~~~~G~s~~~~dAGI~v~~~~d~~~I~nn~i~~-----~~ 184 (410)
T 2inu_A 110 ASHIRVLTSPSAPQAFLVKRAGDPRLSGIVFRDFCLDGVGFTPGKNSYHNGKTGIEVASDNDSFHITGMGFVY-----LE 184 (410)
T ss_dssp SEEEEECCCTTSCEEEEECCCSSSCEECCEEESCEEECCCCSSSTTSCCCSCEEEEECSCEESCEEESCEEES-----CS
T ss_pred CcEEEEeccccccceeEEeeccCcccCCcEECCEEEECCEeecCCCCcccCceeEEEeccCCeEEEECCEEec-----cc
Confidence 66776643 22115666653 4555555555554 3 23466654 6777788888776 34
Q ss_pred cceEecCcccEEEEeeEEecCCCeeEe
Q 042417 96 EGIHIGSSNGSEISHSVIATGDDCVSL 122 (249)
Q Consensus 96 DGi~~~~s~nv~I~n~~i~~gDD~i~i 122 (249)
-||.+..+++.+|++++|.....||-+
T Consensus 185 fGI~l~~a~~~~I~~N~I~e~GNgI~L 211 (410)
T 2inu_A 185 HALIVRGADALRVNDNMIAECGNCVEL 211 (410)
T ss_dssp EEEEETTEESCEEESCEEESSSEEEEE
T ss_pred EEEEEccCCCcEEECCEEEecCCceee
Confidence 577777777777777777643344444
No 71
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=89.71 E-value=6.7 Score=31.39 Aligned_cols=40 Identities=23% Similarity=0.394 Sum_probs=31.8
Q ss_pred eeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEec-CCCeeEe
Q 042417 77 YNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIAT-GDDCVSL 122 (249)
Q Consensus 77 ~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-gDD~i~i 122 (249)
+..+|+|+.|-.+ ..||||... +-+|+|+.++. +.|++.+
T Consensus 52 ~GaTLkNvIIG~~----~~dGIHC~G--~ctl~NVwwedVcEDA~T~ 92 (196)
T 3t9g_A 52 KGANLKNVIIGAP----GCDGIHCYG--DNVVENVVWEDVGEDALTV 92 (196)
T ss_dssp TTCEEEEEEECSC----CTTCEEECS--SEEEEEEEESSCCSCSEEE
T ss_pred CCCEEEEEEECCC----CcCcEEEcC--CEeEEEEEeeeeeceeeEE
Confidence 4678999988653 689999874 56788888876 8888888
No 72
>3t9g_A Pectate lyase; PL3, parallel beta-helix; HET: GOL; 1.50A {Caldicellulosiruptor bescii}
Probab=88.42 E-value=5.2 Score=32.06 Aligned_cols=60 Identities=10% Similarity=0.092 Sum_probs=43.3
Q ss_pred CCceeceeEecccCeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCCee
Q 042417 55 DSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120 (249)
Q Consensus 55 nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i 120 (249)
..+++++.|-..+...+|... +.+|+|+.+..- -.|++.+.++..+.|.+.-.++.+|=|
T Consensus 53 GaTLkNvIIG~~~~dGIHC~G--~ctl~NVwwedV----cEDA~T~kg~g~~~I~GGgA~~A~DKV 112 (196)
T 3t9g_A 53 GANLKNVIIGAPGCDGIHCYG--DNVVENVVWEDV----GEDALTVKSEGVVEVIGGSAKEAADKV 112 (196)
T ss_dssp TCEEEEEEECSCCTTCEEECS--SEEEEEEEESSC----CSCSEEECSSEEEEEESCEEEEEEEEE
T ss_pred CCEEEEEEECCCCcCcEEEcC--CEeEEEEEeeee----eceeeEEcCCCeEEEECCCccCCCceE
Confidence 555666666556677788764 578899888753 468888887778888888877766544
No 73
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=85.63 E-value=0.59 Score=42.30 Aligned_cols=21 Identities=33% Similarity=0.507 Sum_probs=19.0
Q ss_pred cCccCCCccchHHHHHHHHHH
Q 042417 7 FGAVADGIKDDSKAFETAWRE 27 (249)
Q Consensus 7 fGA~gdg~~ddt~Aiq~Ai~~ 27 (249)
=||+|||++|||+|+.+|+.+
T Consensus 4 ~~a~gdgvtddt~a~~~~l~~ 24 (670)
T 3ju4_A 4 GSAKGDGVTDDTAALTSALND 24 (670)
T ss_dssp CCCCCEEEEECHHHHHHHHHH
T ss_pred CcccCCCccCcHHHHHHHhcc
Confidence 489999999999999999954
No 74
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=83.65 E-value=1.9 Score=38.61 Aligned_cols=59 Identities=10% Similarity=0.148 Sum_probs=38.3
Q ss_pred ecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCc-ccEEEEeeEEec
Q 042417 52 FLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSS-NGSEISHSVIAT 115 (249)
Q Consensus 52 ~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s-~nv~I~n~~i~~ 115 (249)
..++++|++++|+++....|.+.. .+.+|++++|... ...||.+... .+.+|++|.+..
T Consensus 113 ~~~~~~i~gl~I~n~g~~GI~v~g-s~~~i~n~~i~~n----~~~GI~l~~~~s~n~I~nn~i~~ 172 (400)
T 1ru4_A 113 TGDYWYFKGVEVTRAGYQGAYVIG-SHNTFENTAFHHN----RNTGLEINNGGSYNTVINSDAYR 172 (400)
T ss_dssp CSSCEEEESEEEESCSSCSEEECS-SSCEEESCEEESC----SSCSEEECTTCCSCEEESCEEEC
T ss_pred ECCeEEEEeEEEEeCCCCcEEEeC-CCcEEEeEEEECC----CceeEEEEcccCCeEEEceEEEc
Confidence 467778888888776655666655 5667777777752 1236766643 366666776654
No 75
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=80.71 E-value=12 Score=34.52 Aligned_cols=100 Identities=9% Similarity=0.062 Sum_probs=61.1
Q ss_pred EEEEecCCCceeceeEecccCeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCC---eeEeCc
Q 042417 48 IRFNFLNDSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDD---CVSLGH 124 (249)
Q Consensus 48 i~~~~~~nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD---~i~ig~ 124 (249)
|.+..+.+.+|++-++.++.. .+++.++++.+|++-.+.........-||.+.++.+ +|++.+|...+. .+ +.
T Consensus 246 im~skS~~n~i~~N~~~~~~g-gi~l~~~~~s~I~~N~f~gN~~~~~~~Gi~i~~~~~-~I~nN~f~~~~g~~~~~--~~ 321 (506)
T 1dbg_A 246 IITSKSQENVYYGNTYLNCQG-TMNFRHGDHQVAINNFYIGNDQRFGYGGMFVWGSRH-VIACNYFELSETIKSRG--NA 321 (506)
T ss_dssp EEEEESBSCEEESCEEESCSS-EEEEEECSSCEEESCEEEECSSSSCBCCEEECSBSC-EEESCEEEESSBCGGGT--SE
T ss_pred EEEEecCCEEEECCEEEcccC-cEEEeecCccEEECCEEECCcCccCceEEEEECCCC-EEECCEEECCcCccccc--cc
Confidence 444455567788888877744 677777777777777776532111146788877544 888888887542 01 12
Q ss_pred ceEE--ccCCCCCCCCceEeEEEEeeEEEcc
Q 042417 125 GISV--GSLGKGINDEEVVGLTVRNCTFTGT 153 (249)
Q Consensus 125 Gi~i--Gs~g~~~~~~~v~ni~v~n~~~~~~ 153 (249)
||.+ |++.. ....++++.|++.+|.+.
T Consensus 322 GI~i~~G~~~~--~~~~~~~~~I~~Ntfi~n 350 (506)
T 1dbg_A 322 ALYLNPGAMAS--EHALAFDMLIANNAFINV 350 (506)
T ss_dssp EEEECCBCTTS--TTCCCBSEEEESCEEESC
T ss_pred cEEEecCCCcc--ccccccCcEEECCEEECC
Confidence 3333 23211 123578999999888853
No 76
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=80.43 E-value=4 Score=35.78 Aligned_cols=63 Identities=10% Similarity=0.061 Sum_probs=46.1
Q ss_pred ecCCCceeceeEecccC--------------------eEEEE-EceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEe
Q 042417 52 FLNDSTITGIKSVDSRY--------------------FHINI-LGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISH 110 (249)
Q Consensus 52 ~~~nv~i~gi~i~ns~~--------------------~~i~~-~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n 110 (249)
.++++++++|+|+|+.. -.+.+ ..++++.+++|.|.+ .-|.+.... .+..+++
T Consensus 94 ~a~~f~a~nlt~~Nt~~~~~~~~~~~~~~~~~~~~QAvAl~v~v~~d~~~f~~c~f~G-----~QDTLy~~~-gr~~~~~ 167 (342)
T 2nsp_A 94 SAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVG-----YQATLYVSG-GRSFFSD 167 (342)
T ss_dssp CSBSCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCBSEEEEEEEEEC-----STTCEEECS-SEEEEES
T ss_pred ECCCEEEEeeEEEccccccccccccccCCccccCCceEEEEEeeccCcEEEEeeEEec-----ccceEEECC-CCEEEEc
Confidence 47789999999999741 12432 468899999999998 456777765 4678899
Q ss_pred eEEecCCCee
Q 042417 111 SVIATGDDCV 120 (249)
Q Consensus 111 ~~i~~gDD~i 120 (249)
|+|+..-|-|
T Consensus 168 c~I~G~vDFI 177 (342)
T 2nsp_A 168 CRISGTVDFI 177 (342)
T ss_dssp CEEEESEEEE
T ss_pred CEEEeceEEE
Confidence 9888654433
No 77
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=71.76 E-value=14 Score=31.99 Aligned_cols=62 Identities=13% Similarity=0.058 Sum_probs=47.1
Q ss_pred ecCCCceeceeEecccC------eEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCCee
Q 042417 52 FLNDSTITGIKSVDSRY------FHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120 (249)
Q Consensus 52 ~~~nv~i~gi~i~ns~~------~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i 120 (249)
..+++++++|+|+|+.. -.+.+ .++++.+++|+|.+ ..|++.....+ ..+++|+|...-|-|
T Consensus 92 ~a~~f~~~nlt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r-~~~~~c~I~G~vDFI 159 (319)
T 1gq8_A 92 VGAGFLARDITFQNTAGAAKHQAVALRV-GSDLSAFYRCDILA-----YQDSLYVHSNR-QFFINCFIAGTVDFI 159 (319)
T ss_dssp CSTTCEEEEEEEEECCCGGGCCCCSEEE-CCTTEEEEEEEEEC-----STTCEEECSSE-EEEESCEEEESSSCE
T ss_pred ECCCEEEEEeEeEccCCCcCCceEEEEe-cCCcEEEEEeEECc-----cceeeeecCcc-EEEEecEEEeeeeEE
Confidence 36789999999998642 33554 57889999999998 46788887655 589999998765554
No 78
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=71.55 E-value=37 Score=27.14 Aligned_cols=40 Identities=23% Similarity=0.429 Sum_probs=28.8
Q ss_pred eeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEec-CCCeeEe
Q 042417 77 YNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIAT-GDDCVSL 122 (249)
Q Consensus 77 ~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-gDD~i~i 122 (249)
+..+|+|+.|-.+ ..||||... .-+|+|+.++. +.|++.+
T Consensus 48 ~GaTLkNvIIG~~----~~dGIHC~G--~CtleNVwwedVcEDA~T~ 88 (197)
T 1ee6_A 48 AGASLKNVVIGAP----AADGVHCYG--DCTITNVIWEDVGEDALTL 88 (197)
T ss_dssp TTEEEEEEEECSS----CTTCEEEES--CEEEEEEEESSCCSCSEEE
T ss_pred CCCEEEEEEEcCC----CcccEEEcC--ceeEEEEEeeeccccccEE
Confidence 4678888887553 578888764 46777777765 7777777
No 79
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=71.15 E-value=13 Score=32.04 Aligned_cols=62 Identities=13% Similarity=0.080 Sum_probs=47.4
Q ss_pred ecCCCceeceeEecccC------eEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCCee
Q 042417 52 FLNDSTITGIKSVDSRY------FHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120 (249)
Q Consensus 52 ~~~nv~i~gi~i~ns~~------~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i 120 (249)
.++++++++|+|+|+.. -.+.+ .++++.+++|+|.+ ..|++.....+ ..+++|+|...-|-|
T Consensus 88 ~a~~f~~~~lt~~Nt~g~~~~qAvAl~v-~~d~~~f~~c~f~g-----~QDTLy~~~~r-~~~~~c~I~G~vDFI 155 (317)
T 1xg2_A 88 VGQGFILQDICIQNTAGPAKDQAVALRV-GADMSVINRCRIDA-----YQDTLYAHSQR-QFYRDSYVTGTVDFI 155 (317)
T ss_dssp CSTTCEEESCEEEECCCGGGCCCCSEEE-CCTTEEEESCEEEC-----STTCEEECSSE-EEEESCEEEESSSCE
T ss_pred ECCCEEEEEeEEecccCCccCceEEEEE-eCCcEEEEEeEeCc-----cccceeecCcc-EEEEeeEEEeceeEE
Confidence 46789999999998632 33554 57899999999998 46788887655 488999998765554
No 80
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=60.69 E-value=44 Score=29.32 Aligned_cols=64 Identities=9% Similarity=0.060 Sum_probs=48.8
Q ss_pred ecCCCceeceeEecccC--------------------eEEEEE-ceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEe
Q 042417 52 FLNDSTITGIKSVDSRY--------------------FHINIL-GCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISH 110 (249)
Q Consensus 52 ~~~nv~i~gi~i~ns~~--------------------~~i~~~-~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n 110 (249)
.++++.+++|+|+|+.. -.+.+. .++...+.+|+|.+ .-|.+......+..+++
T Consensus 120 ~a~~f~a~nitf~Nt~~~~~~~~~~~~~p~~~~~~QAvAl~v~~~~D~~~f~~C~f~G-----~QDTLy~~~~gr~yf~~ 194 (364)
T 3uw0_A 120 NAPNFTAENLTIRNDFDFPANKKKADTDPTKLKDTQAVALLLAENSDKARFKAVKLEG-----YQDTLYSKTGSRSYFSD 194 (364)
T ss_dssp CSTTCEEEEEEEEECCCHHHHHHSCTTCTTCCSCCCCCSEEECTTCEEEEEEEEEEEC-----SBSCEEECTTCEEEEES
T ss_pred ECCCEEEEeeeeEcCCcccccccccccccccccCCccEEEEEecCCCeEEEEeeEEEe-----cccceEeCCCCCEEEEc
Confidence 46889999999998742 235554 58899999999998 45788777456888999
Q ss_pred eEEecCCCee
Q 042417 111 SVIATGDDCV 120 (249)
Q Consensus 111 ~~i~~gDD~i 120 (249)
|+|+..-|-|
T Consensus 195 c~I~GtvDFI 204 (364)
T 3uw0_A 195 CEISGHVDFI 204 (364)
T ss_dssp CEEEESEEEE
T ss_pred CEEEcCCCEE
Confidence 9998655544
No 81
>1ee6_A Pectate lyase; parallel beta-helix, high-alkaline, low-molecular-weight; 2.30A {Bacillus SP} SCOP: b.80.1.1
Probab=50.99 E-value=93 Score=24.82 Aligned_cols=60 Identities=12% Similarity=0.124 Sum_probs=43.0
Q ss_pred CCceeceeEecccCeEEEEEceeeEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEecCCCee
Q 042417 55 DSTITGIKSVDSRYFHINILGCYNLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIATGDDCV 120 (249)
Q Consensus 55 nv~i~gi~i~ns~~~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~gDD~i 120 (249)
..+++++.|-.+....+|... +.+|+|+.++.- -.|++.+.++..+.|.+.-.++.+|=|
T Consensus 49 GaTLkNvIIG~~~~dGIHC~G--~CtleNVwwedV----cEDA~T~k~~g~~~I~GGgA~~A~DKV 108 (197)
T 1ee6_A 49 GASLKNVVIGAPAADGVHCYG--DCTITNVIWEDV----GEDALTLKSSGTVNISGGAAYKAYDKV 108 (197)
T ss_dssp TEEEEEEEECSSCTTCEEEES--CEEEEEEEESSC----CSCSEEEEESEEEEEESCEEEEEEEEE
T ss_pred CCEEEEEEEcCCCcccEEEcC--ceeEEEEEeeec----cccccEEcCCCeEEEECCCccCCCccE
Confidence 456777777666777888875 489999988763 568888887667777777766655544
No 82
>3riq_A Tailspike protein; right handed beta-helix, endorhamnosidase, lipopolysaccharide, viral protein; 1.50A {Siphovirus 9na}
Probab=42.60 E-value=1.5e+02 Score=26.67 Aligned_cols=38 Identities=13% Similarity=0.085 Sum_probs=20.5
Q ss_pred cEEEEeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEc
Q 042417 105 GSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTG 152 (249)
Q Consensus 105 nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~ 152 (249)
|-.|+|...+. .+|+-+|.-|+ .+.|+||++++|.=.+
T Consensus 309 nHii~Ni~~~~-------~lGVG~~~DG~---~~~v~ni~~~dcag~G 346 (543)
T 3riq_A 309 QHIIRNIITRD-------CMGIGAWWDGQ---KNIIDNVVTYEAHKEG 346 (543)
T ss_dssp CCEEEEEEEES-------CSSCSSEECSS---SCEEEEEEEESCSSCS
T ss_pred hhhhhhhheec-------cceeeeeecCC---CCeEeeEEeeccccCc
Confidence 34455554443 24444444442 3468888888775433
No 83
>2vfm_A Bifunctional tail protein; P22 tailspike protein, salmonella bacteriophage P22, protein folding, protein stability; 1.50A {Enterobacteria phage P22} PDB: 2vfp_A 2vfo_A 2vfq_A 2vfn_A 1tsp_A 1qrb_A 1qq1_A 1qrc_A 1tyu_A* 1tyv_A 1tyw_A* 1tyx_A* 1qa2_A 1clw_A 1qa3_A 1qa1_A
Probab=41.98 E-value=73 Score=28.11 Aligned_cols=38 Identities=26% Similarity=0.427 Sum_probs=21.0
Q ss_pred cEEEEeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEc
Q 042417 105 GSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTG 152 (249)
Q Consensus 105 nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~ 152 (249)
|-+|.|..+++. -|+-+|..|+ ...|+||++++|-=.+
T Consensus 318 NHliDnllv~gs-------LGVG~GMDG~---G~YVSNitv~DCAGsG 355 (559)
T 2vfm_A 318 NHLIDNLLVRGA-------LGVGFGMDGK---GMYVSNITVEDCAGSG 355 (559)
T ss_dssp CCEEEEEEEECC-------SSEEEEEEEE---SCEEEEEEEESCSSEE
T ss_pred hhhhhhheeecc-------cceeeeecCC---CceEeeeEehhccCcc
Confidence 445555555531 2333443332 3579999999885433
No 84
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=40.15 E-value=1.8e+02 Score=25.15 Aligned_cols=40 Identities=18% Similarity=0.176 Sum_probs=31.3
Q ss_pred eEEEEeeEEecCCCCCCCcceEecCcccEEEEeeEEec-CCCeeEe
Q 042417 78 NLKLNDLKITAHADSPNTEGIHIGSSNGSEISHSVIAT-GDDCVSL 122 (249)
Q Consensus 78 nv~I~n~~i~~~~~~~n~DGi~~~~s~nv~I~n~~i~~-gDD~i~i 122 (249)
..+++|+.|-. +..||||... -+-+|+|+.++. +.|++.+
T Consensus 159 GatlkNvIiG~----~~~dGIHC~~-G~CtleNVwwedVcEDA~T~ 199 (344)
T 3b4n_A 159 ATVKNLRISAS----GGADGIHCDS-GNCTIENVIWEDICEDAATN 199 (344)
T ss_dssp CEEEEEEECTT----CCTTCEEEEE-SEEEEEEEEESSCSSCSEEE
T ss_pred CcEEEEEEecC----CCccceEEcc-CCeeEEEEeehhccccccee
Confidence 47888888854 3689999882 247899998876 8899888
No 85
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=32.07 E-value=1.7e+02 Score=26.22 Aligned_cols=63 Identities=11% Similarity=0.153 Sum_probs=42.6
Q ss_pred ecCCCceeceeEecccC----------eEEEEEceeeEEEEeeEEecCCCCCCCcceEe-----------cCcccEEEEe
Q 042417 52 FLNDSTITGIKSVDSRY----------FHINILGCYNLKLNDLKITAHADSPNTEGIHI-----------GSSNGSEISH 110 (249)
Q Consensus 52 ~~~nv~i~gi~i~ns~~----------~~i~~~~s~nv~I~n~~i~~~~~~~n~DGi~~-----------~~s~nv~I~n 110 (249)
..+++.+++|+|+|... -.+.+ .++...+.+|.|.+..+ =+.. +.......++
T Consensus 199 ~g~~F~a~niTf~Ntag~~~~~~~~QAVAL~v-~gDr~~fy~C~f~G~QD-----TLy~~~~~~~~~~~~d~~gRqyy~~ 272 (422)
T 3grh_A 199 QNNGLQLQNLTIENTLGDSVDAGNHPAVALRT-DGDQVQINNVNILGRQN-----TFFVTNSGVQNRLETNRQPRTLVTN 272 (422)
T ss_dssp CCTTCEEEEEEEEETTGGGSCSSCCCCCSEEE-CCSSEEEEEEEEECSTT-----CEEECCCCTTCSCCSSCCCEEEEES
T ss_pred ECCCEEEEeeEEEeCCCCCCCCCCCceEEEEe-cCCcEEEEeeEEEeecc-----eeeeccccccccccccccccEEEEe
Confidence 46899999999998632 12443 56899999999998543 2322 1234667888
Q ss_pred eEEecCCCee
Q 042417 111 SVIATGDDCV 120 (249)
Q Consensus 111 ~~i~~gDD~i 120 (249)
|+|...=|-|
T Consensus 273 CyIeGtVDFI 282 (422)
T 3grh_A 273 SYIEGDVDIV 282 (422)
T ss_dssp CEEEESEEEE
T ss_pred cEEeccccEE
Confidence 8887654433
No 86
>2v5i_A Salmonella typhimurium DB7155 bacteriophage DET7 tailspike; O-antigen binding and hydrolysis, beta-helix, viral protein; 1.60A {Bacteriophage}
Probab=31.89 E-value=91 Score=27.49 Aligned_cols=38 Identities=21% Similarity=0.425 Sum_probs=21.2
Q ss_pred cEEEEeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEc
Q 042417 105 GSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTG 152 (249)
Q Consensus 105 nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~ 152 (249)
|-+|.|..+++. -|+-+|..|+ ...|+||++++|-=.+
T Consensus 321 NHliDnllv~gs-------LGVG~GMDG~---G~YVSNitv~DCAGsG 358 (559)
T 2v5i_A 321 NHLVDNILVMNS-------LGVGLGMDGS---GGYVSNVTVQDCAGAG 358 (559)
T ss_dssp CCEEEEEEEESC-------SSEEEEEEEE---SCEEEEEEEESCSSEE
T ss_pred hhhhhhheeecc-------cceeeeecCC---CceEeeeEehhccCcc
Confidence 445666555531 2333443332 3579999999985333
No 87
>2xc1_A Bifunctional tail protein; hydrolase, endoglycosidase, salmonella phage P22; HET: PE4; 1.65A {Enterobacteria phage P22} PDB: 1lkt_A
Probab=27.24 E-value=1.3e+02 Score=27.73 Aligned_cols=38 Identities=26% Similarity=0.427 Sum_probs=21.0
Q ss_pred cEEEEeeEEecCCCeeEeCcceEEccCCCCCCCCceEeEEEEeeEEEc
Q 042417 105 GSEISHSVIATGDDCVSLGHGISVGSLGKGINDEEVVGLTVRNCTFTG 152 (249)
Q Consensus 105 nv~I~n~~i~~gDD~i~ig~Gi~iGs~g~~~~~~~v~ni~v~n~~~~~ 152 (249)
|-+|.|..+++. -|+-+|..|+ .+.|+||++++|-=.+
T Consensus 425 nhlidn~~v~~s-------lgvg~gmdg~---g~yvsnitv~dcag~g 462 (666)
T 2xc1_A 425 NHLIDNLLVRGA-------LGVGFGMDGK---GMYVSNITVEDCAGSG 462 (666)
T ss_dssp CCEEEEEEEESC-------SSEEEEEEEE---SCEEEEEEEESCSSEE
T ss_pred hhhhhhheeecc-------cceeeeecCC---CceEeeeEehhccCcc
Confidence 445565555531 2333443332 3579999999985333
No 88
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=22.40 E-value=62 Score=26.86 Aligned_cols=24 Identities=17% Similarity=0.340 Sum_probs=18.1
Q ss_pred HHHHHHHHHHhhcCCCCcEEEecCCe
Q 042417 19 KAFETAWREACNWDGIKSAVLVPPGK 44 (249)
Q Consensus 19 ~Aiq~Ai~~a~~~~g~g~~v~iP~G~ 44 (249)
+.+.+.|.++|++. |.++|+|.|-
T Consensus 98 ~~l~~~L~~aA~~g--g~~l~vpSGA 121 (253)
T 1j5p_A 98 EVFRERFFSELKNS--PARVFFPSGA 121 (253)
T ss_dssp HHHHHHHHHHHHTC--SCEEECCCTT
T ss_pred HHHHHHHHHHHHHC--CCeEEecCCc
Confidence 55666776777654 6899999996
Done!