BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042418
(121 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2SS72|FTHS_METLZ Formate--tetrahydrofolate ligase OS=Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z) GN=fhs PE=3 SV=1
Length = 560
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 20/94 (21%)
Query: 9 HSVGSTTCLLGKAVDCNYLHGPKYLEID---------VDIGSSTVANGVLGL---VNGV- 55
H++ S LL +D N++ L+ID +D+ + N ++GL NGV
Sbjct: 136 HAITSANNLLCAMID-NHIQQGNALDIDTRRIIFKRCLDMNDRALRNIIIGLGGQTNGVP 194
Query: 56 ------ITTLVVDMAFLVQANTTDELPERLIGVV 83
IT MA L AN D+L ERL V+
Sbjct: 195 REDHFMITVASEVMAILCLANDIDDLKERLGNVI 228
>sp|P51335|MOEB_PORPU Probable molybdopterin-synthase adenylyltransferase OS=Porphyra
purpurea GN=moeB PE=3 SV=1
Length = 382
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 9 HSVGSTTCLLGKAVDCNYLHGPKYLEIDVDIGSS-----TVAN-GVLGLVNGVITTL 59
H G+ G+ NY GPKY + +I + T +N GVLGL+ G+I TL
Sbjct: 156 HIYGAIFQFEGQVSTFNYQGGPKYRDFHNNIETENNPEDTCSNAGVLGLLPGIIGTL 212
>sp|Q0SQ82|FTHS_CLOPS Formate--tetrahydrofolate ligase OS=Clostridium perfringens (strain
SM101 / Type A) GN=fhs PE=3 SV=1
Length = 556
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 20/90 (22%)
Query: 9 HSVGSTTCLLGKAVDCNYLHGPKYLEID---------VDIGSSTVANGVLGL---VNG-- 54
H++ S LL A+D N++H L ID +D+ + N V+G+ +NG
Sbjct: 131 HAITSANNLLCAAID-NHIHQGNLLRIDSRRIVFKRVMDMNDRALRNIVVGMGGKINGFL 189
Query: 55 -----VITTLVVDMAFLVQANTTDELPERL 79
+IT MA L A+ ++L ER+
Sbjct: 190 REDGFMITVASEIMAILCMASDLEDLKERM 219
>sp|Q8XHL4|FTHS_CLOPE Formate--tetrahydrofolate ligase OS=Clostridium perfringens (strain
13 / Type A) GN=fhs PE=3 SV=1
Length = 556
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 20/90 (22%)
Query: 9 HSVGSTTCLLGKAVDCNYLHGPKYLEID---------VDIGSSTVANGVLGL---VNG-- 54
H++ S LL A+D N++H L ID +D+ + N V+G+ +NG
Sbjct: 131 HAITSANNLLCAAID-NHIHQGNLLRIDSRRIVFKRVMDMNDRALRNIVVGMGGKINGFL 189
Query: 55 -----VITTLVVDMAFLVQANTTDELPERL 79
+IT MA L A+ ++L ER+
Sbjct: 190 REDGFMITVASEIMAILCMASDLEDLKERM 219
>sp|Q0TMI3|FTHS_CLOP1 Formate--tetrahydrofolate ligase OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=fhs PE=3 SV=1
Length = 556
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 20/90 (22%)
Query: 9 HSVGSTTCLLGKAVDCNYLHGPKYLEID---------VDIGSSTVANGVLGL---VNG-- 54
H++ S LL A+D N++H L ID +D+ + N V+G+ +NG
Sbjct: 131 HAITSANNLLCAAID-NHIHQGNLLRIDSRRIVFKRVMDMNDRALRNIVVGMGGKINGFL 189
Query: 55 -----VITTLVVDMAFLVQANTTDELPERL 79
+IT MA L A+ ++L ER+
Sbjct: 190 REDGFMITVASEIMAILCMASDLEDLKERM 219
>sp|Q84XI3|ENT8_ARATH Equilibrative nucleotide transporter 8 OS=Arabidopsis thaliana
GN=ETN8 PE=2 SV=1
Length = 389
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 3/38 (7%)
Query: 27 LHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMA 64
L GPK+L +V + V +LGL NG +T++++ MA
Sbjct: 319 LRGPKWLRTEVPV---VVLTFMLGLTNGYLTSVLMIMA 353
>sp|Q8VXY7|ENT1_ARATH Equilibrative nucleotide transporter 1 OS=Arabidopsis thaliana
GN=ENT1 PE=1 SV=1
Length = 450
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 12 GSTTCLLGKAVDCNYLHGPKYLEIDVDIGSSTVANGVLGLVNGVITTLVVDMA 64
GS LL + LHGP +L ++ + T+ +LGL NG +T++++ +A
Sbjct: 365 GSIARLLFYPLFWGCLHGPMFLRTEIPV---TILTCLLGLTNGYLTSVLMILA 414
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,019,593
Number of Sequences: 539616
Number of extensions: 1649365
Number of successful extensions: 4298
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 4295
Number of HSP's gapped (non-prelim): 11
length of query: 121
length of database: 191,569,459
effective HSP length: 88
effective length of query: 33
effective length of database: 144,083,251
effective search space: 4754747283
effective search space used: 4754747283
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 55 (25.8 bits)