Query 042423
Match_columns 344
No_of_seqs 271 out of 1420
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 10:07:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/042423.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/042423hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bkp_A Cyclophilin; malaria, i 100.0 4.6E-55 1.6E-59 407.2 17.8 181 2-183 11-206 (232)
2 2hq6_A Serologically defined c 100.0 3E-53 1E-57 383.0 18.4 172 2-175 14-185 (185)
3 3bo7_A Peptidyl-prolyl CIS-tra 100.0 2.1E-53 7.3E-58 388.3 17.1 171 8-181 2-184 (201)
4 1zkc_A Peptidyl-prolyl CIS-tra 100.0 4.8E-52 1.6E-56 378.4 15.8 171 6-179 13-184 (197)
5 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.2E-51 4E-56 364.8 17.2 159 14-175 2-161 (161)
6 2poe_A Cyclophilin-like protei 100.0 6.2E-51 2.1E-55 367.8 17.2 168 7-176 11-181 (185)
7 2b71_A Cyclophilin-like protei 100.0 3.2E-49 1.1E-53 359.6 16.3 159 11-172 37-195 (196)
8 2fu0_A Cyclophilin, putative; 100.0 5.3E-49 1.8E-53 347.7 16.4 155 12-169 5-159 (160)
9 2x7k_A Peptidyl-prolyl CIS-tra 100.0 9.9E-49 3.4E-53 347.8 17.7 156 11-169 10-165 (166)
10 2a2n_A Peptidylprolyl isomeras 100.0 6.8E-48 2.3E-52 345.5 17.7 156 10-168 19-175 (176)
11 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.1E-47 3.8E-52 351.1 16.5 163 11-176 10-172 (203)
12 3ich_A Peptidyl-prolyl CIS-tra 100.0 1.2E-47 4.1E-52 347.1 14.2 166 7-176 10-186 (188)
13 1w74_A Peptidyl-prolyl CIS-tra 100.0 3.5E-47 1.2E-51 344.9 16.4 159 6-169 17-191 (191)
14 1mzw_A Cyclophilin H, U-snRNP- 100.0 5.6E-46 1.9E-50 333.2 15.5 157 9-169 7-177 (177)
15 4fru_A Cyclophilin B, peptidyl 100.0 3.4E-46 1.2E-50 336.5 13.0 164 7-174 7-181 (185)
16 2haq_A Cyclophilin; rotamase, 100.0 9.9E-46 3.4E-50 330.4 15.4 159 6-169 5-172 (172)
17 1a58_A Cyclophilin; isomerase, 100.0 1.7E-45 5.9E-50 329.9 16.6 154 12-169 6-176 (177)
18 2cmt_A Peptidyl-prolyl CIS-tra 100.0 3E-45 1E-49 327.1 17.4 156 10-170 8-172 (172)
19 2wfi_A Peptidyl-prolyl CIS-tra 100.0 2.5E-45 8.6E-50 329.5 16.8 158 8-169 5-179 (179)
20 1qng_A Peptidyl-prolyl CIS-tra 100.0 3.1E-45 1.1E-49 326.4 15.5 154 11-169 2-170 (170)
21 2igv_A Peptidyl-prolyl CIS-tra 100.0 8.3E-45 2.8E-49 324.4 16.4 153 13-170 4-172 (173)
22 1lop_A Cyclophilin A; rotamase 100.0 2.5E-45 8.5E-50 325.0 11.6 151 14-169 1-163 (164)
23 2r99_A Peptidyl-prolyl CIS-tra 100.0 1.6E-44 5.5E-49 322.7 16.7 154 12-170 11-173 (173)
24 2he9_A NK-tumor recognition pr 100.0 6.9E-45 2.4E-49 330.1 14.3 157 10-170 17-190 (192)
25 3s6m_A Peptidyl-prolyl CIS-tra 100.0 8.6E-45 2.9E-49 322.1 14.4 152 13-169 4-167 (167)
26 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1.8E-44 6.2E-49 320.0 16.4 153 13-170 4-165 (165)
27 1v9t_A Cyclophilin B; beta bar 100.0 1.3E-44 4.5E-49 320.9 13.9 153 12-169 4-165 (166)
28 3pmp_A Cyclophilin A; peptidyl 100.0 3.4E-44 1.2E-48 317.8 16.2 146 19-169 14-163 (164)
29 2ose_A Probable peptidyl-proly 100.0 9.5E-45 3.2E-49 338.2 13.2 161 13-179 15-216 (234)
30 1z81_A Cyclophilin; structural 100.0 2.9E-44 9.8E-49 333.8 15.3 158 9-169 56-229 (229)
31 2c3b_A Ppiase, cyclophilin; is 100.0 8.9E-45 3E-49 324.1 10.1 149 18-169 18-172 (172)
32 3rdd_A Peptidyl-prolyl CIS-tra 100.0 9.1E-44 3.1E-48 320.7 16.1 158 8-170 18-184 (184)
33 2poy_A Peptidyl-prolyl CIS-tra 100.0 6.8E-44 2.3E-48 322.1 15.2 156 8-168 15-186 (186)
34 1ihg_A Cyclophilin 40; ppiase 100.0 3.6E-43 1.2E-47 341.8 17.0 158 12-174 15-189 (370)
35 3k2c_A Peptidyl-prolyl CIS-tra 100.0 5.6E-43 1.9E-47 317.7 16.9 153 13-170 28-191 (193)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 3.1E-38 1.1E-42 310.5 12.5 156 2-171 158-356 (369)
37 2nnz_A Hypothetical protein; b 83.8 4.4 0.00015 34.9 8.4 32 13-44 30-61 (153)
38 1zx8_A Hypothetical protein TM 44.3 1.4E+02 0.0048 24.9 9.3 96 14-142 14-120 (136)
39 3kop_A Uncharacterized protein 29.7 45 0.0015 29.7 3.9 32 13-44 22-55 (188)
40 2khf_A PLNJ; anti-microbial, b 20.9 26 0.00088 21.0 0.4 16 37-52 3-18 (26)
No 1
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.6e-55 Score=407.20 Aligned_cols=181 Identities=53% Similarity=0.988 Sum_probs=170.4
Q ss_pred CCCCCCCCCCCcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCccc--
Q 042423 2 SSVYVLEPPTKGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIY-- 79 (344)
Q Consensus 2 s~~y~~ePpt~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siy-- 79 (344)
|++|..+||.+++|+|+|++|+|+|+||++.||+||+||++||+.|||+|+.||||+++||||||||+++|+||.++|
T Consensus 11 ~~~~~~~p~~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydgt~FhRVi~~FmiQgGdp~~~G~Gg~si~~~ 90 (232)
T 3bkp_A 11 RENLYFQGSTRGKVVLHTSLGDLDVELWARECPLACRNFVQLCLEGYYVNTIFHRVVKDFIVQGGDPTGTGRGGADTTFD 90 (232)
T ss_dssp -CGGGCCCSCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHHTTTTTCBEEEEETTTEEEECCTTSSSSCCCCCTTT
T ss_pred cccccccCCCCCEEEEEECCCcEEEEEcCCCCcHHHHHHHHHhhcCccCCCEEEEEeCCCEEEcCCCCCCCCCCCccccC
Confidence 578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcCCCcccccCceeEEecCCCC-------------CCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecc
Q 042423 80 GGNFADEFHSRLRFNHRGLVACANAGSP-------------HSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLG 146 (344)
Q Consensus 80 g~~f~dE~~~rlk~~~rGlVsma~~g~~-------------~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~ 146 (344)
|.+|++|+++.++|+.+|+||||+.+.+ ++|+|||||||+++||||++|||||+|+|+++++|++|+
T Consensus 91 g~~f~dE~~~~l~h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vvg~~v~~v~kI~ 170 (232)
T 3bkp_A 91 GKPFDVETHPRLKFRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVTGHTLYNLMKFN 170 (232)
T ss_dssp TCCBCCCCCTTCCCCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEECGGGHHHHHHHT
T ss_pred CCccCCccccCcCcCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEEeCchHHHHHHH
Confidence 9999999998999999999999999843 799999999999999999999999999976777789999
Q ss_pred cccCCCCCCCCCCCcEEEEEEEecCCCCcccCCCCCC
Q 042423 147 EVDTDKNDRPLDPPPKLLSVEVLWNPFEDIVPRAPSR 183 (344)
Q Consensus 147 ~v~td~~~rP~~~~i~I~~~~Vl~~PF~Di~~r~~~~ 183 (344)
.++++.+++|+.+ |+|.+|+|+.|||+|+++|....
T Consensus 171 ~~~t~~~~~P~~~-i~I~~~~vl~dPf~d~~~~~~~~ 206 (232)
T 3bkp_A 171 DLEVGKEDRPMTP-PFIKSVDVLWNPFEDLVPRRLPD 206 (232)
T ss_dssp TSCBCGGGCBSSC-CBEEEEEEEECCCTTCCCSSCCC
T ss_pred cCCcCCCCCcCCC-eEEEEEEEEcCChhhhhhccccc
Confidence 9999999999999 99999999999999999996443
No 2
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=3e-53 Score=382.96 Aligned_cols=172 Identities=69% Similarity=1.172 Sum_probs=164.7
Q ss_pred CCCCCCCCCCCcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCC
Q 042423 2 SSVYVLEPPTKGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGG 81 (344)
Q Consensus 2 s~~y~~ePpt~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~ 81 (344)
+..|..+||++++|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|||||||++++|+||.++||.
T Consensus 14 ~~~~~~~~~~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~ 93 (185)
T 2hq6_A 14 LVPRGSEPPTNGKVLLKTTAGDIDIELWSKEAPKACRNFIQLCLEAYYDNTIFHRVVPGFIVQGGDPTGTGSGGESIYGA 93 (185)
T ss_dssp -CCTTCCCCCBCEEEEEETTEEEEEEEBTTTCHHHHHHHHHHHHTTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSS
T ss_pred ccccccCCCCCCEEEEEeCCccEEEEEeCCCCcHHHHHHHHHhhcCccCCCEEEEEECCCEEEcCCCCCCCCCCCcccCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCCc
Q 042423 82 NFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPPP 161 (344)
Q Consensus 82 ~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~i 161 (344)
+|++|++++++|+.||+||||+.+ +++|+||||||++++++||++|+|||+|+|+++.++++|+.++++.+++|+.+ +
T Consensus 94 ~~~dE~~~~l~h~~~G~lsMA~~g-~~s~gSQFFIt~~~~~~LDg~~tVFG~V~G~~v~~~~~i~~~~~~~~~~P~~~-v 171 (185)
T 2hq6_A 94 PFKDEFHSRLRFNRRGLVAMANAG-SHDNGSQFFFTLGRADELNNKHTIFGKVTGDTVYNMLRLSEVDIDDDERPHNP-H 171 (185)
T ss_dssp CBCCCCBTTBCSCSSSEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEECGGGHHHHHHTTCSCBCTTSCBSSC-C
T ss_pred ccccccccCcccCCCeEEEEccCC-CCCccceEEEECCCCCccCCCceEEEEEEeCeeehhhHHhhCCcCCCCCCCCC-e
Confidence 999999888999999999999999 99999999999999999999999999999766777789999999999999999 9
Q ss_pred EEEEEEEecCCCCc
Q 042423 162 KLLSVEVLWNPFED 175 (344)
Q Consensus 162 ~I~~~~Vl~~PF~D 175 (344)
+|.+|+|+.|||+|
T Consensus 172 ~I~~~~v~~~Pf~d 185 (185)
T 2hq6_A 172 KIKSCEVLFNPFDD 185 (185)
T ss_dssp EEEEEEEEECTTC-
T ss_pred EEEEEEEeCCCCCC
Confidence 99999999999997
No 3
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=2.1e-53 Score=388.25 Aligned_cols=171 Identities=42% Similarity=0.738 Sum_probs=149.9
Q ss_pred CCCCCcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEcc-----CCCCCCCCCCccc---
Q 042423 8 EPPTKGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGG-----DPTGTGTGGESIY--- 79 (344)
Q Consensus 8 ePpt~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgG-----Dp~g~G~gg~siy--- 79 (344)
+|+++++|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|||||| ||+++|+||.|+|
T Consensus 2 ~~~~~~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Ydg~~FhRvi~~f~iQgG~~~~~Dp~~~g~gg~si~~~~ 81 (201)
T 3bo7_A 2 KLKKKGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPSKKKEVQQSPRSIS 81 (201)
T ss_dssp ---CCEEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEECCGGGCCC-------CCSSCCC
T ss_pred CCCCceEEEEEeCCCCEEEEEcCCCCcHHHHHHHHHHhcCccCCCEEEEeeCCCEEEcCcccccCCCCCCCCCccccccc
Confidence 58899999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred ----CCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCC
Q 042423 80 ----GGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDR 155 (344)
Q Consensus 80 ----g~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~r 155 (344)
|.+|++|+++.++|+++|+||||+.| |++|+||||||+++++|||++|+|||+|++ |+++|++|+.++++.+++
T Consensus 82 ~~~~g~~f~dE~~~~l~h~~~G~lsmA~~g-p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~-Gmdvv~~I~~~~t~~~~~ 159 (201)
T 3bo7_A 82 GFPGGAPFEDEFDNRLVHQGIGVLSMANDG-KHSNLSEFFITFKSCEHLNNKHTIFGRVVG-GLDVLRQWEKLETDKKDK 159 (201)
T ss_dssp SSTTCCCBCCCCCTTCCCCSTTEEEECCSS-TTCBSSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHTTCCBCTTSC
T ss_pred cccCCCcccCcccCCCCcCCCcEEEEeeCC-CCCcccEEEEECCCCcccCCCceEEEEEec-CHHHHHHHHhCCcCCCCC
Confidence 89999998889999999999999998 999999999999999999999999999996 899999999999999999
Q ss_pred CCCCCcEEEEEEEecCCCCcccCCCC
Q 042423 156 PLDPPPKLLSVEVLWNPFEDIVPRAP 181 (344)
Q Consensus 156 P~~~~i~I~~~~Vl~~PF~Di~~r~~ 181 (344)
|+.+ ++|.+|+|+.+||+|+..+..
T Consensus 160 P~~~-i~I~~~~v~~dPf~d~~~~~~ 184 (201)
T 3bo7_A 160 PLKP-PKVEEIIVFKNPFEDARKEME 184 (201)
T ss_dssp BSSC-CBEEEEEEEECCC--------
T ss_pred cCCC-eEEEEEEEEcCCccCHHHHHH
Confidence 9999 999999999999999987754
No 4
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=4.8e-52 Score=378.39 Aligned_cols=171 Identities=44% Similarity=0.815 Sum_probs=165.5
Q ss_pred CCCCCCCcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCC
Q 042423 6 VLEPPTKGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFAD 85 (344)
Q Consensus 6 ~~ePpt~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~d 85 (344)
..+|+..++|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+||||||||+++|+|+.++||.+|++
T Consensus 13 ~~~~~~~~~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~f~iQgGd~~~~g~Gg~si~g~~f~d 92 (197)
T 1zkc_A 13 GLVPRGSGYVRLHTNKGDLNLELHCDLTPKTCENFIRLCKKHYYDGTIFHRSIRNFVIQGGDPTGTGTGGESYWGKPFKD 92 (197)
T ss_dssp CCCCCSCEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEECCTTSSSSCCCBTTBSCBCC
T ss_pred CCCCCCCcEEEEEeCCccEEEEEcCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCCEEEcCCCCCCCCCCCccCCCcccc
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCC-CCCCCCCcEEE
Q 042423 86 EFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKN-DRPLDPPPKLL 164 (344)
Q Consensus 86 E~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~-~rP~~~~i~I~ 164 (344)
|+.+.++|+.+|+||||+.+ |++|+||||||+.++++||++|+|||+|++ |+++|++|+.++++.+ ++|+.+ |+|.
T Consensus 93 E~~~~l~h~~~G~lsMAn~g-p~sngSQFFIt~~~~~~LDg~~tVFG~Vv~-Gmdvv~~I~~~~t~~~~~~P~~~-i~I~ 169 (197)
T 1zkc_A 93 EFRPNLSHTGRGILSMANSG-PNSNRSQFFITFRSCAYLDKKHTIFGRVVG-GFDVLTAMENVESDPKTDRPKEE-IRID 169 (197)
T ss_dssp CCCTTCCSCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHHSCBCTTTCCBSSC-CEEE
T ss_pred ccCcCcCCCCceEEEEecCC-CCCcccEEEEEcCCCCccCCCccEEEEEEc-CHHHHHHHHcCCCCCCCCCcCCC-eEEE
Confidence 98889999999999999998 999999999999999999999999999996 8999999999999987 999999 9999
Q ss_pred EEEEecCCCCcccCC
Q 042423 165 SVEVLWNPFEDIVPR 179 (344)
Q Consensus 165 ~~~Vl~~PF~Di~~r 179 (344)
+|+|+.|||+|+.+|
T Consensus 170 ~~~v~~dPf~d~~~~ 184 (197)
T 1zkc_A 170 ATTVFVDPYEEADAQ 184 (197)
T ss_dssp EEEEEECTTHHHHHH
T ss_pred EEEEEcCCcccHHHH
Confidence 999999999999776
No 5
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.2e-51 Score=364.75 Aligned_cols=159 Identities=44% Similarity=0.789 Sum_probs=154.2
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCCCcCCCccc
Q 042423 14 KVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFADEFHSRLRF 93 (344)
Q Consensus 14 kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~dE~~~rlk~ 93 (344)
+|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|+|||||++++|+|+.++||.+|++|+++.++|
T Consensus 2 ~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l~h 81 (161)
T 2ok3_A 2 SVTLHTDVGDIKIEVFCERTPKTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGNSIWGKKFEDEYSEYLKH 81 (161)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTTCCS
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHhhhcccCCCEEEEEECCCEEecCCCCCCCCCCCcccCCccccccCcCcCc
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999888999
Q ss_pred ccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCC-CCCCCCCcEEEEEEEecCC
Q 042423 94 NHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKN-DRPLDPPPKLLSVEVLWNP 172 (344)
Q Consensus 94 ~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~-~rP~~~~i~I~~~~Vl~~P 172 (344)
+++|+||||+.+ |++|+||||||+++++|||++|+|||+|++ |+++|++|+.++++.+ ++|+.+ ++|.+|+|+.||
T Consensus 82 ~~~G~lsma~~g-p~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~-G~dvv~~I~~~~~~~~~~~P~~~-v~I~~~~i~~~P 158 (161)
T 2ok3_A 82 NVRGVVSMANNG-PNTNGSQFFITYGKQPHLDMKYTVFGKVID-GLETLDELEKLPVNEKTYRPLND-VHIKDITIHANP 158 (161)
T ss_dssp CSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTCCBCTTTCCBSSC-CBEEEEEEECCS
T ss_pred CCCeEEEEecCC-CCCcceEEEEEcCCCCccCCCEeEEEEEeC-CHHHHHHHHhCCccCCCCCcCCC-eEEEEEEEecCC
Confidence 999999999999 999999999999999999999999999996 8999999999999987 999999 999999999999
Q ss_pred CCc
Q 042423 173 FED 175 (344)
Q Consensus 173 F~D 175 (344)
|+|
T Consensus 159 f~d 161 (161)
T 2ok3_A 159 FAQ 161 (161)
T ss_dssp CC-
T ss_pred CCC
Confidence 987
No 6
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=6.2e-51 Score=367.81 Aligned_cols=168 Identities=41% Similarity=0.718 Sum_probs=155.7
Q ss_pred CCCCCCcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCCC
Q 042423 7 LEPPTKGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFADE 86 (344)
Q Consensus 7 ~ePpt~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~dE 86 (344)
..++....|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+||||||||+++|+||.++||.+|++|
T Consensus 11 ~~~~~~~~v~i~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE 90 (185)
T 2poe_A 11 RENLYFQGVRIITNYGDLKFELFCSQCPKACKNFLALSASGYYKNTIFHKNIKGFIIQGGDPTGTGKGGESIYGRYFDDE 90 (185)
T ss_dssp ----CCCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTEEEEEECTTSEEEEEETTSSSSCCCBTTBSCBCCC
T ss_pred ccCCCceEEEEEecCccEEEEEeCCCCcHHHHHHHHHhccCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCccccc
Confidence 34566788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccccCceeEEecCCC---CCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCCcEE
Q 042423 87 FHSRLRFNHRGLVACANAGS---PHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPPPKL 163 (344)
Q Consensus 87 ~~~rlk~~~rGlVsma~~g~---~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~i~I 163 (344)
+.+.++|+++|+||||+.+. |++|+||||||++++||||++|+|||+|++ |+++|++|+.++++.+++|+.+ ++|
T Consensus 91 ~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~-Gmdvv~~I~~~~t~~~~~P~~~-v~I 168 (185)
T 2poe_A 91 IYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLID-GFETLNTLENCPSDKSHKPIDE-III 168 (185)
T ss_dssp CCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHHSCBCTTSCBSSC-CEE
T ss_pred ccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeC-CHHHHHHHHhCCcCCCCCcCCC-eEE
Confidence 98899999999999999986 899999999999999999999999999996 8999999999999999999999 999
Q ss_pred EEEEEecCCCCcc
Q 042423 164 LSVEVLWNPFEDI 176 (344)
Q Consensus 164 ~~~~Vl~~PF~Di 176 (344)
.+|+|+.|||+|.
T Consensus 169 ~~~~i~~dPf~d~ 181 (185)
T 2poe_A 169 KDIVIHSNPIADQ 181 (185)
T ss_dssp EEEEEECCC----
T ss_pred EEEEEECCCCCCc
Confidence 9999999999874
No 7
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=3.2e-49 Score=359.59 Aligned_cols=159 Identities=40% Similarity=0.740 Sum_probs=150.5
Q ss_pred CCcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCCCcCCC
Q 042423 11 TKGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFADEFHSR 90 (344)
Q Consensus 11 t~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~dE~~~r 90 (344)
.+.+|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+||||||||+++|+||.++||.+|++|+++.
T Consensus 37 ~~~~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~~~g~Y~g~~FhRVi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~ 116 (196)
T 2b71_A 37 ERGYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDEINKE 116 (196)
T ss_dssp HSCEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEEEEEEETTTEEEEEETTSSSSCCCBTTBSCBCCCCCTT
T ss_pred CCcEEEEEeCCCCEEEEEeCCCCcHHHHHHHHHhhcCCcCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCcccccccCC
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred cccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCCcEEEEEEEec
Q 042423 91 LRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPPPKLLSVEVLW 170 (344)
Q Consensus 91 lk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~i~I~~~~Vl~ 170 (344)
++|+++|+||||+.+ |++||||||||+++++|||++|+|||+|++ |+++|++|+.++++.+++|+.+ ++|.+|+|+.
T Consensus 117 l~h~~~G~lsMAn~g-pns~gSQFFIt~~~~~~LDg~~tVFG~Vv~-Gmdvv~~I~~~~t~~~~~P~~~-i~I~~~~i~~ 193 (196)
T 2b71_A 117 LKHTGAGILSMSNNG-PNTNSSQFFITLAPLPHLDGKHTIFARVSK-NMTCIENIASVQTTATNKPIFD-LKILRTSTAV 193 (196)
T ss_dssp CCCCSTTEEEECCSS-TTCBSSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTSCBCTTCCBSSC-CEEEEEEC--
T ss_pred cCcCCCeEEEEccCC-CCCcccEEEEECCCCCccCCCEeEEEEEec-CHHHHHHHHhCCcCCCCCCCCC-eEEEEEEEec
Confidence 999999999999998 999999999999999999999999999996 8999999999999999999999 9999999999
Q ss_pred CC
Q 042423 171 NP 172 (344)
Q Consensus 171 ~P 172 (344)
||
T Consensus 194 dP 195 (196)
T 2b71_A 194 NA 195 (196)
T ss_dssp --
T ss_pred CC
Confidence 88
No 8
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=5.3e-49 Score=347.67 Aligned_cols=155 Identities=48% Similarity=0.831 Sum_probs=150.2
Q ss_pred CcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCCCcCCCc
Q 042423 12 KGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFADEFHSRL 91 (344)
Q Consensus 12 ~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~dE~~~rl 91 (344)
...|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+||||||||+++|+|++++||.+|++|+++.+
T Consensus 5 ~~~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~l 84 (160)
T 2fu0_A 5 PKSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHL 84 (160)
T ss_dssp CCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCBTTB
T ss_pred CCEEEEEecCccEEEEEeCCCChHHHHHHHHHhccCccCCCEEEEEECCCEEEeCCcCCCCCCCCcccCCCccccccCCc
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999889
Q ss_pred ccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCCcEEEEEEEe
Q 042423 92 RFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPPPKLLSVEVL 169 (344)
Q Consensus 92 k~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~i~I~~~~Vl 169 (344)
+|+++|+||||+.+ |++|+||||||+.++||||++|+|||+|++ |+++|++|+.++++.+++|+.+ ++|.+|+|+
T Consensus 85 ~h~~~G~lsmA~~g-p~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~-G~dvv~~I~~~~t~~~~~P~~~-v~I~~~~v~ 159 (160)
T 2fu0_A 85 NHSKPFMVSMANCG-PNTNGSQFFITTVPCPWLDFKHTVFGKVTQ-GSKIVLDIEKVRTDKRDKPLED-IKILNIKIN 159 (160)
T ss_dssp CSSSSSEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTSCBCTTSCBSSC-CBEEEEEEC
T ss_pred ccCCceEEEEecCC-CCCcccEEEEECCCCCccCCCcEEEEEEEc-CHHHHHHHHhCCcCCCCCcCCC-eEEEEEEEe
Confidence 99999999999998 999999999999999999999999999996 8999999999999989999999 999999986
No 9
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=9.9e-49 Score=347.79 Aligned_cols=156 Identities=49% Similarity=0.863 Sum_probs=150.9
Q ss_pred CCcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCCCcCCC
Q 042423 11 TKGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFADEFHSR 90 (344)
Q Consensus 11 t~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~dE~~~r 90 (344)
.+.+|+|+|++|+|+|+||++.||+||+||++||+.|||+|+.||||+|+||||||||+++|+|+.|+||.+|++|+++.
T Consensus 10 ~~~~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~fhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~~ 89 (166)
T 2x7k_A 10 QPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPD 89 (166)
T ss_dssp CCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCTT
T ss_pred CCCEEEEEeCCCcEEEEEccCCCCHHHHHHHHHHhcCCCCCCEEEEEECCCEEEcCCCCCCCCCCCccCCCccccccccc
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred cccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCCcEEEEEEEe
Q 042423 91 LRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPPPKLLSVEVL 169 (344)
Q Consensus 91 lk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~i~I~~~~Vl 169 (344)
++|.++|+|||||.+ |++|+||||||+++++|||++|+|||+|++ |+++|++|+.++++.+++|+.+ |+|.+|+|+
T Consensus 90 l~h~~~G~lsmAn~g-p~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~-G~dvv~~I~~~~t~~~~~P~~~-i~I~~~~i~ 165 (166)
T 2x7k_A 90 LKFTGAGILAMANAG-PDTNGSQFFVTLAPTQWLDGKHTIFGRVCQ-GIGMVNRVGMVETNSQDRPVDD-VKIIKAYPS 165 (166)
T ss_dssp SCCCSTTEEEECBSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHTTSCBCTTSCBSSC-CEEEEEEEC
T ss_pred cCCCCCeEEEEeeCC-CCCccceEEEECCCCCccCCCeeEEEEEEc-CHHHHHHHHcCCcCCCCCcCCC-eEEEEEEEe
Confidence 999999999999999 999999999999999999999999999996 8999999999999999999999 999999986
No 10
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=6.8e-48 Score=345.49 Aligned_cols=156 Identities=46% Similarity=0.842 Sum_probs=149.7
Q ss_pred CCCcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCCCcCC
Q 042423 10 PTKGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFADEFHS 89 (344)
Q Consensus 10 pt~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~dE~~~ 89 (344)
+....|+|+|++|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|||||||+.++|+|+.|+||.+|++|+++
T Consensus 19 ~~~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~g~gg~si~g~~~~dE~~~ 98 (176)
T 2a2n_A 19 RVSDSAIIHTSMGDIHTKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHS 98 (176)
T ss_dssp CCCSEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBCCEEETTTEEEECCTTSSSSCCCCTTSSCBCCCCCT
T ss_pred CCCCEEEEEecCccEEEEEeCCCChHHHHHHHHHhhcCccCCCEEEEEECCcEEEccCCCCCCCCCCcccCCcccccccc
Confidence 33467999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCC-CCCCCCCCCcEEEEEEE
Q 042423 90 RLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTD-KNDRPLDPPPKLLSVEV 168 (344)
Q Consensus 90 rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td-~~~rP~~~~i~I~~~~V 168 (344)
.++|+++|+||||+.+ |++|+||||||+.+++|||++|+|||+|++ |+++|++|+.++++ .+++|+.+ |+|.+|+|
T Consensus 99 ~l~h~~~G~lsmA~~g-p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~-Gmdvv~~I~~~~t~~~~~~P~~~-v~I~~v~v 175 (176)
T 2a2n_A 99 TLRHDRPYTLSMANAG-SNTNGSQFFITVVPTPWLDNKHTVFGRVTK-GMEVVQRISNVKVNPKTDKPYED-VSIINITV 175 (176)
T ss_dssp TCCSCSSSEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTSCBCTTTCCBSSC-CBEEEEEE
T ss_pred ccccCCceEEEEEeCC-CCCcccEEEEECCCCCccCCCeeEEEEEeC-CHHHHHHHHcCCccCCCCccCCC-eEEEEEEE
Confidence 8999999999999998 999999999999999999999999999996 89999999999998 68999999 99999987
No 11
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.1e-47 Score=351.09 Aligned_cols=163 Identities=47% Similarity=0.796 Sum_probs=157.0
Q ss_pred CCcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCCCcCCC
Q 042423 11 TKGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFADEFHSR 90 (344)
Q Consensus 11 t~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~dE~~~r 90 (344)
.+.+|+|+|++|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|||||||++++|.++.++|+.+|++|+++.
T Consensus 10 ~~~~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~~~g~Ydg~~FhRVi~~F~iQgGd~~~~g~gg~si~g~~f~dE~~~~ 89 (203)
T 2k7n_A 10 QPPNVYLETSMGIIVLELYWKHAPKTCKNFAELARRGYYNGTKFHRIIKDFMIQGGDPTGTGRGGASIYGKQFEDELHPD 89 (203)
T ss_dssp CCSEEEEEESSCEEEEEECTTTCTTHHHHHHHHHHHTCGGGCEEEEEETTTEEEEECSSSSSSCCCTTSCSCBCCCCCCS
T ss_pred CCCEEEEEeCCCcEEEEEccCCCcHHHHHHHHHHhcCccCCCEEEEEeCCcEEEcCCCCCCCCCCCccCCCccccccccc
Confidence 44689999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred cccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCCcEEEEEEEec
Q 042423 91 LRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPPPKLLSVEVLW 170 (344)
Q Consensus 91 lk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~i~I~~~~Vl~ 170 (344)
++|.++|+|+|||.+ |++|+||||||+.+++|||++|+|||+|++ |+++|++|+.++++.+++|+.+ |+|.+|+|+.
T Consensus 90 l~h~~~G~lsMAn~g-pnsngSQFFIt~~~~~~LDg~~tVFG~Vve-Gmdvv~kI~~~~t~~~~~P~~~-V~I~~~~v~~ 166 (203)
T 2k7n_A 90 LKFTGAGILAMANAG-PDTNGSQFFVTLAPTQWLDGKHTIFGRVCQ-GIGMVNRVGMVETNSQDRPVDD-VKIIKAYPSG 166 (203)
T ss_dssp SCCCSSCEEEEEESS-TTCEEEEEEEESSCCCSSTTTSCEEEEEES-CHHHHHHHHSCCEEETTEECCC-CBEEEEEECC
T ss_pred ccCCCCeEEEEeeCC-CCCcccEEEEEcCCCCccCCCeeEEEEEEc-CHHHHHHHHcCCcCCCCCcCCC-eEEEEEEEEe
Confidence 999999999999998 999999999999999999999999999995 8999999999999988999999 9999999999
Q ss_pred CCCCcc
Q 042423 171 NPFEDI 176 (344)
Q Consensus 171 ~PF~Di 176 (344)
.++.+-
T Consensus 167 ~~~s~~ 172 (203)
T 2k7n_A 167 GGGSGG 172 (203)
T ss_dssp CCCCCC
T ss_pred cCCCCC
Confidence 988875
No 12
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=1.2e-47 Score=347.11 Aligned_cols=166 Identities=40% Similarity=0.680 Sum_probs=155.6
Q ss_pred CCCCCCcEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHh--cCC-ccCceeEEeecCcEEEccC-CCCCCCCCCc
Q 042423 7 LEPPTKGKVIVK-----TTHGPIDIELWPKEAPKAVRNFVQLCL--EGY-FDNTIFHRIIKGFLVQGGD-PTGTGTGGES 77 (344)
Q Consensus 7 ~ePpt~~kV~l~-----Ts~G~I~IEL~~d~aP~tv~NFl~Lc~--~g~-Ydgt~FhRVip~fiIQgGD-p~g~G~gg~s 77 (344)
.+|+.+.+|.|. |++|+|+|+||++.||+||+||++||+ .|| |+|+.||||+|+||||||| +.++|+|+.|
T Consensus 10 ~~p~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~s 89 (188)
T 3ich_A 10 KGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKS 89 (188)
T ss_dssp CSCEEEEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCB
T ss_pred CCCCcCCeEEEEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCCEEEcCCccCCCCCCCcc
Confidence 467777888876 679999999999999999999999996 689 9999999999999999999 6789999999
Q ss_pred ccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCC
Q 042423 78 IYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPL 157 (344)
Q Consensus 78 iyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~ 157 (344)
+||.+|++|. ..++|+++|+|||||.+ +++|+||||||+.+++|||++|+|||+|++ |+++|++|+.++++.+++|+
T Consensus 90 i~g~~f~dE~-~~l~h~~~G~lsmAn~g-p~tngSQFfIt~~~~~~LDg~~tVFG~Vv~-G~dvv~~I~~~~~~~~~~P~ 166 (188)
T 3ich_A 90 IYGERFPDEN-FKLKHYGPGWVSMANAG-KDTNGSQFFITTVKTAWLDGKHVVFGKVLE-GMEVVRKVESTKTDSRDKPL 166 (188)
T ss_dssp TTBSCBCCCC-CCSCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTSCBCTTSCBS
T ss_pred ccCCcccccc-cCcccCCCeEEEEccCC-CCCcccEEEEECCCCcccCCCeeEEEEEeC-CHHHHHHHHhCCcCCCCeEC
Confidence 9999999995 47899999999999999 999999999999999999999999999996 89999999999999989999
Q ss_pred CCCcEEEEEEEe--cCCCCcc
Q 042423 158 DPPPKLLSVEVL--WNPFEDI 176 (344)
Q Consensus 158 ~~~i~I~~~~Vl--~~PF~Di 176 (344)
.+ |+|.+|+++ .+||+|.
T Consensus 167 ~~-v~I~~~~~l~~~~Pf~~~ 186 (188)
T 3ich_A 167 KD-VIIADCGKIEVEKPFAIA 186 (188)
T ss_dssp SC-EEEEEEEEEEEEEEEECC
T ss_pred CC-EEEEEeEEEecCCCCCCC
Confidence 99 999999998 8999974
No 13
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=3.5e-47 Score=344.92 Aligned_cols=159 Identities=45% Similarity=0.785 Sum_probs=147.6
Q ss_pred CCCCCCCcEEEEEecceeEEEEEcCCCChHHHHHHHHHH---------------hcCCccCceeEEeecCcEEEccCCCC
Q 042423 6 VLEPPTKGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLC---------------LEGYFDNTIFHRIIKGFLVQGGDPTG 70 (344)
Q Consensus 6 ~~ePpt~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc---------------~~g~Ydgt~FhRVip~fiIQgGDp~g 70 (344)
..||+++.+|+|+|+.|+|+|+||++.||+||+||++|| ..+||+|+.||||+|+|||||||+++
T Consensus 17 ~~~~~~~~~v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~~g 96 (191)
T 1w74_A 17 TNSPLATATATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDPTG 96 (191)
T ss_dssp ----CCSEEEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCTTS
T ss_pred ccCCCCCeEEEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCccCCCEEEEEeCCCEEecCCCCC
Confidence 458999999999999999999999999999999999999 45899999999999999999999998
Q ss_pred CCCCCCcccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEc-Cceeeeeeccccc
Q 042423 71 TGTGGESIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTG-DSIFNLLRLGEVD 149 (344)
Q Consensus 71 ~G~gg~siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg-~gi~vL~kI~~v~ 149 (344)
+|+|+ ||++|++|+++.++|+++|+|||||.| |++|+||||||+.++||||++|+|||+|++ +|+++|++|+.++
T Consensus 97 ~G~gg---~g~~f~dE~~~~l~h~~~G~lsMAn~g-pntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~ 172 (191)
T 1w74_A 97 TGRGG---PGYKFADEFHPELQFDKPYLLAMANAG-PGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTA 172 (191)
T ss_dssp SSSCC---SSCCBCCCCCTTCCSCSSSEEEECCSS-TTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSC
T ss_pred CCCCC---CCCccccccccCCCcCCCcEEEEeeCC-CCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCC
Confidence 88887 688999998888999999999999999 999999999999999999999999999993 4899999999999
Q ss_pred CCCCCCCCCCCcEEEEEEEe
Q 042423 150 TDKNDRPLDPPPKLLSVEVL 169 (344)
Q Consensus 150 td~~~rP~~~~i~I~~~~Vl 169 (344)
++.+++|+.+ |+|.+|+|+
T Consensus 173 t~~~~~P~~~-v~I~~~~i~ 191 (191)
T 1w74_A 173 TDGNDRPTDP-VVIESITIS 191 (191)
T ss_dssp BCTTSCBSSC-CEEEEEEEC
T ss_pred cCCCCCcCCC-eEEEEEEEC
Confidence 9999999999 999999984
No 14
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=5.6e-46 Score=333.20 Aligned_cols=157 Identities=39% Similarity=0.768 Sum_probs=148.2
Q ss_pred CCCCcEEEEEe-----cceeEEEEEcCCCChHHHHHHHHHHhcCC--------ccCceeEEeecCcEEEccCCC-CCCCC
Q 042423 9 PPTKGKVIVKT-----THGPIDIELWPKEAPKAVRNFVQLCLEGY--------FDNTIFHRIIKGFLVQGGDPT-GTGTG 74 (344)
Q Consensus 9 Ppt~~kV~l~T-----s~G~I~IEL~~d~aP~tv~NFl~Lc~~g~--------Ydgt~FhRVip~fiIQgGDp~-g~G~g 74 (344)
.|.+.+|.|.+ +.|+|+|+||++.||+||+||++||+++| |+|+.||||+|+|||||||++ ++|+|
T Consensus 7 ~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~g 86 (177)
T 1mzw_A 7 SPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTG 86 (177)
T ss_dssp CCCCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCC
T ss_pred CCCCCEEEEEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCCEEEcCCcccCCCCC
Confidence 45567899885 69999999999999999999999999998 999999999999999999986 88999
Q ss_pred CCcccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCC
Q 042423 75 GESIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKND 154 (344)
Q Consensus 75 g~siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~ 154 (344)
+.|+||.+|++|.. .++|+++|+||||+.+ |++|+||||||+.++||||++|+|||+|+. |+++|++|+.++++.++
T Consensus 87 g~si~g~~f~dE~~-~l~h~~~G~lsmAn~g-p~tngSQFfIt~~~~~~LDg~~~VFG~Vv~-G~dvv~~I~~~~t~~~~ 163 (177)
T 1mzw_A 87 VASIYRGPFADENF-KLRHSAPGLLSMANSG-PSTNGCQFFITCSKCDWLDGKHVVFGKIID-GLLVMRKIENVPTGPNN 163 (177)
T ss_dssp CCCTTSSCBCCCCC-CSCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTSCBCGGG
T ss_pred CCccCCCcccCccc-ccccCCCCEEEEccCC-CCCcceEEEEECCCCCccCCCeeEEEEEeC-CHHHHHHHHhCCcCCCC
Confidence 99999999999976 7899999999999999 999999999999999999999999999995 89999999999999999
Q ss_pred CCCCCCcEEEEEEEe
Q 042423 155 RPLDPPPKLLSVEVL 169 (344)
Q Consensus 155 rP~~~~i~I~~~~Vl 169 (344)
+|..+ |+|.+|++|
T Consensus 164 ~P~~~-v~I~~cG~l 177 (177)
T 1mzw_A 164 KPKLP-VVISQCGEM 177 (177)
T ss_dssp CBSSC-EEEEEEEEC
T ss_pred CCCCC-EEEEeceeC
Confidence 99999 999999985
No 15
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.4e-46 Score=336.55 Aligned_cols=164 Identities=41% Similarity=0.681 Sum_probs=154.4
Q ss_pred CCCCCCcEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhc--C-CccCceeEEeecCcEEEccCCC-CCCCCCCc
Q 042423 7 LEPPTKGKVIVKTT-----HGPIDIELWPKEAPKAVRNFVQLCLE--G-YFDNTIFHRIIKGFLVQGGDPT-GTGTGGES 77 (344)
Q Consensus 7 ~ePpt~~kV~l~Ts-----~G~I~IEL~~d~aP~tv~NFl~Lc~~--g-~Ydgt~FhRVip~fiIQgGDp~-g~G~gg~s 77 (344)
.+|+.+.+|.|.++ +|+|+|+||++.||+||+||++||++ | ||+|+.||||+|+|||||||++ ++|+|+.+
T Consensus 7 ~~p~~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~s 86 (185)
T 4fru_A 7 KGPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKS 86 (185)
T ss_dssp EEEEEEEEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCB
T ss_pred CCCCcCcEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCcc
Confidence 46889999999877 99999999999999999999999986 6 7999999999999999999987 88999999
Q ss_pred ccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCC
Q 042423 78 IYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPL 157 (344)
Q Consensus 78 iyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~ 157 (344)
+||..|++|.. .++|+++|+|||||.+ +++|+||||||+.+++|||++|+|||+|++ |+++|++|+.++++.+++|+
T Consensus 87 i~g~~f~de~~-~~~h~~~G~lsma~~g-p~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~-G~dvv~~I~~~~t~~~~~P~ 163 (185)
T 4fru_A 87 IYGERFPDENF-KLKHYGPGWVSMANAG-KDTNGSQFFITTVKTAWLDGKHVVFGKVLE-GMEVVRKVETTKTDGRDKPL 163 (185)
T ss_dssp TTBSCBCCCCC-CSCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTSCBCTTSCBS
T ss_pred ccCCccCcccc-ccCcCCCeEEEEeeCC-CCCcceEEEEEeCCCcccCCCccEEEEEeC-CHHHHHHHHhCCCCCCCcCC
Confidence 99999999976 6889999999999999 999999999999999999999999999996 89999999999999999999
Q ss_pred CCCcEEEEEEEe--cCCCC
Q 042423 158 DPPPKLLSVEVL--WNPFE 174 (344)
Q Consensus 158 ~~~i~I~~~~Vl--~~PF~ 174 (344)
.+ |+|.+|+++ .+||+
T Consensus 164 ~~-v~I~~~g~l~~~~Pf~ 181 (185)
T 4fru_A 164 KD-VTIADCGKIEVEKPFA 181 (185)
T ss_dssp SC-EEEEEEEEEEEEEEEE
T ss_pred CC-EEEEEceEEecCCCCc
Confidence 99 999999877 67875
No 16
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=9.9e-46 Score=330.41 Aligned_cols=159 Identities=43% Similarity=0.775 Sum_probs=148.2
Q ss_pred CCCCCCCcEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHH--hcCC-ccCceeEEeecCcEEEccC-CCCCCCCCC
Q 042423 6 VLEPPTKGKVIVK-----TTHGPIDIELWPKEAPKAVRNFVQLC--LEGY-FDNTIFHRIIKGFLVQGGD-PTGTGTGGE 76 (344)
Q Consensus 6 ~~ePpt~~kV~l~-----Ts~G~I~IEL~~d~aP~tv~NFl~Lc--~~g~-Ydgt~FhRVip~fiIQgGD-p~g~G~gg~ 76 (344)
.-||..+.+|.|. |+.|+|+|+||++.||+||+||++|| +.|| |+|+.||||+|+||||||| +.++|+|+.
T Consensus 5 ~~~~~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~ 84 (172)
T 2haq_A 5 HHEPEVTAKVYFDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGK 84 (172)
T ss_dssp --CCCCCEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTTEEEECCTTTSSSSCCC
T ss_pred cCCCCCCCeEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCCEEecCCccCCCCCCCc
Confidence 4588888888775 78999999999999999999999999 6799 9999999999999999999 668999999
Q ss_pred cccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCC
Q 042423 77 SIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRP 156 (344)
Q Consensus 77 siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP 156 (344)
|+||.+|++|. ..++|. +|+||||+.+ |++|+||||||+.++++||++|+|||+|++ |+++|++|+.++++.+++|
T Consensus 85 si~g~~f~dE~-~~l~h~-~G~lsmAn~g-p~tngSQFfIt~~~~~~LDg~~~vFG~Vv~-G~dvv~~I~~~~t~~~~~P 160 (172)
T 2haq_A 85 SIYGEKFADEN-LNVKHF-VGALSMANAG-PNTNGSQFFITTAPTPWLDGRHVVFGKVLD-GMDVVLRIEKTKTNSHDRP 160 (172)
T ss_dssp CSSSSCBCCCC-CCSCCC-TTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTSCBCGGGCB
T ss_pred cccCCcccCcC-CCcccC-ceEEEEccCC-CCCcccEEEEECCCCCccCCCEeEEEEEeC-CHHHHHHHHhCCcCCCCcC
Confidence 99999999995 478998 9999999999 999999999999999999999999999996 8999999999999998999
Q ss_pred CCCCcEEEEEEEe
Q 042423 157 LDPPPKLLSVEVL 169 (344)
Q Consensus 157 ~~~~i~I~~~~Vl 169 (344)
..+ |+|.+|++|
T Consensus 161 ~~~-v~I~~~g~l 172 (172)
T 2haq_A 161 VKP-VKIVASGEL 172 (172)
T ss_dssp SSC-EEEEEEEEC
T ss_pred CCC-eEEEEeEEC
Confidence 999 999999975
No 17
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=1.7e-45 Score=329.93 Aligned_cols=154 Identities=39% Similarity=0.695 Sum_probs=144.9
Q ss_pred CcEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHhc--------C---CccCceeEEeecCcEEEccCCC-CCCCC
Q 042423 12 KGKVIVK-----TTHGPIDIELWPKEAPKAVRNFVQLCLE--------G---YFDNTIFHRIIKGFLVQGGDPT-GTGTG 74 (344)
Q Consensus 12 ~~kV~l~-----Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~--------g---~Ydgt~FhRVip~fiIQgGDp~-g~G~g 74 (344)
..+|.|. |+.|+|+|+||++.||+||+||++||++ | ||+|+.||||+|+|||||||++ ++|+|
T Consensus 6 ~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~g 85 (177)
T 1a58_A 6 RRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTG 85 (177)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSC
T ss_pred CcEEEEEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCC
Confidence 4477776 4699999999999999999999999985 4 8999999999999999999997 88999
Q ss_pred CCcccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCC
Q 042423 75 GESIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKND 154 (344)
Q Consensus 75 g~siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~ 154 (344)
++|+||.+|++|.+ .++|+++|+|||||.+ |++|+||||||+.++||||++|+|||+|++ |+++|++|+.++++.++
T Consensus 86 g~si~g~~f~dE~~-~~~h~~~G~lsmAn~g-p~tngSQFfIt~~~~~~LDg~~~VFG~Vv~-G~dvv~~I~~~~~~~~~ 162 (177)
T 1a58_A 86 GESIYGGMFDDEEF-VMKHDEPFVVSMANKG-PNTNGSQFFITTTPAPHLNNIHVVFGKVVS-GQEVVTKIEYLKTNSKN 162 (177)
T ss_dssp CCCTTSSCBCCCCC-CSCCCSSSEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTSCBCTTS
T ss_pred CCcccCCcccCccc-CcccCCCeEEEEeeCC-CCCceeEEEEECCCCCccCCCEEEEEEEEc-CHHHHHHHHhCCCCCCC
Confidence 99999999999987 6889999999999998 999999999999999999999999999996 89999999999999999
Q ss_pred CCCCCCcEEEEEEEe
Q 042423 155 RPLDPPPKLLSVEVL 169 (344)
Q Consensus 155 rP~~~~i~I~~~~Vl 169 (344)
+|+.+ |+|.+|++|
T Consensus 163 ~P~~~-v~I~~~G~l 176 (177)
T 1a58_A 163 RPLAD-VVILNCGEL 176 (177)
T ss_dssp CBSSC-EEEEEEEEE
T ss_pred cCCCC-eEEEEeEEE
Confidence 99999 999999987
No 18
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=3e-45 Score=327.15 Aligned_cols=156 Identities=38% Similarity=0.707 Sum_probs=145.1
Q ss_pred CCCcEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHhc--CC-ccCceeEEeecCcEEEccCCC-CCCCCCCcccC
Q 042423 10 PTKGKVIVK-----TTHGPIDIELWPKEAPKAVRNFVQLCLE--GY-FDNTIFHRIIKGFLVQGGDPT-GTGTGGESIYG 80 (344)
Q Consensus 10 pt~~kV~l~-----Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~--g~-Ydgt~FhRVip~fiIQgGDp~-g~G~gg~siyg 80 (344)
..+.+|.|. |+.|+|+|+||++.||+||+||++||++ || |+|+.||||+|+|||||||++ ++|+|+.|+||
T Consensus 8 ~~~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g 87 (172)
T 2cmt_A 8 RNLPRVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYG 87 (172)
T ss_dssp -CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTB
T ss_pred CCCCEEEEEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCCEEEcCCccCCCCCCCCccCC
Confidence 345678888 8899999999999999999999999984 88 999999999999999999997 78999999999
Q ss_pred CCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCC
Q 042423 81 GNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPP 160 (344)
Q Consensus 81 ~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~ 160 (344)
.+|++|.+ .++|+++|+||||+.+ |++|+||||||+.+++|||++|+|||+|++ |+++|++|+.++++ +++|..+
T Consensus 88 ~~f~dE~~-~l~h~~~G~lsmA~~g-p~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~-G~dvv~~I~~~~~~-~~~P~~~- 162 (172)
T 2cmt_A 88 RKFDDENF-QLRHEGFGVLSMANSG-PNTNGSQFFICTTKCDWLDGKHVVFGRVVD-GQNVVKKMESVGSK-SGKVKEP- 162 (172)
T ss_dssp SCBCCCCC-CSCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHGGGGCCT-TCCCSSC-
T ss_pred Cccccccc-CcccCCceEEEEeeCC-CCCcccEEEEECCCCCccCCCeeEEEEEEc-CHHHHHHHHhCCCC-CCCCCCC-
Confidence 99999976 7899999999999998 999999999999999999999999999996 89999999999885 5899999
Q ss_pred cEEEEEEEec
Q 042423 161 PKLLSVEVLW 170 (344)
Q Consensus 161 i~I~~~~Vl~ 170 (344)
|+|.+|++|.
T Consensus 163 v~I~~~g~l~ 172 (172)
T 2cmt_A 163 VIISRCGELI 172 (172)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEEeEeEC
Confidence 9999999873
No 19
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=2.5e-45 Score=329.48 Aligned_cols=158 Identities=35% Similarity=0.603 Sum_probs=145.5
Q ss_pred CCCCCcEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHh-----------cCCccCceeEEeecCcEEEccCCC-C
Q 042423 8 EPPTKGKVIVK-----TTHGPIDIELWPKEAPKAVRNFVQLCL-----------EGYFDNTIFHRIIKGFLVQGGDPT-G 70 (344)
Q Consensus 8 ePpt~~kV~l~-----Ts~G~I~IEL~~d~aP~tv~NFl~Lc~-----------~g~Ydgt~FhRVip~fiIQgGDp~-g 70 (344)
+.+...+|.|. |+.|+|+|+||++.||+||+||++||+ .+||+|+.||||+|+|||||||++ +
T Consensus 5 ~~~~~~~vf~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~ 84 (179)
T 2wfi_A 5 IKVQRPRCFFDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEG 84 (179)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTS
T ss_pred cCCCCCeEEEEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCeECCCEEEEEECCCEEEcccccCC
Confidence 34445677665 689999999999999999999999997 579999999999999999999997 8
Q ss_pred CCCCCCcccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccC
Q 042423 71 TGTGGESIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDT 150 (344)
Q Consensus 71 ~G~gg~siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~t 150 (344)
+|+|++|+||..|++|.+ .++|+++|+|||||.+ |++|+||||||+.++||||++|+|||+|+. |+++|++|+.+++
T Consensus 85 ~g~gg~si~g~~f~dE~~-~~~h~~~G~lsMAn~g-p~tngSQFfIt~~~~~~LDg~~tVFG~Vv~-G~dvv~~I~~~~t 161 (179)
T 2wfi_A 85 NGRGGESIYGGFFEDESF-AVKHNKEFLLSMANRG-KDTNGSQFFITTKPTPHLDGHHVVFGQVIS-GQEVVREIENQKT 161 (179)
T ss_dssp SSSCCCCTTSSCBCCCCC-CSCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTCCB
T ss_pred CCCCCCcccCCccccccc-CcCcCCCeEEEEEeCC-CCCcceEEEEEcCCCcccCCCeeEEEEEeC-CHHHHHHHHcCCC
Confidence 899999999999999987 6889999999999999 999999999999999999999999999996 8999999999999
Q ss_pred CCCCCCCCCCcEEEEEEEe
Q 042423 151 DKNDRPLDPPPKLLSVEVL 169 (344)
Q Consensus 151 d~~~rP~~~~i~I~~~~Vl 169 (344)
+.+++|+.+ |+|.+|++|
T Consensus 162 ~~~~~P~~~-v~I~~~G~l 179 (179)
T 2wfi_A 162 DAASKPFAE-VRILSCGEL 179 (179)
T ss_dssp CTTSCBSSC-EEEEEEEEC
T ss_pred CCCCCCCCC-eEEEeCeeC
Confidence 999999999 999999875
No 20
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=3.1e-45 Score=326.39 Aligned_cols=154 Identities=40% Similarity=0.716 Sum_probs=144.8
Q ss_pred CCcEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHh-cCC--------ccCceeEEeecCcEEEccCCC-CCCCCC
Q 042423 11 TKGKVIVKTT-----HGPIDIELWPKEAPKAVRNFVQLCL-EGY--------FDNTIFHRIIKGFLVQGGDPT-GTGTGG 75 (344)
Q Consensus 11 t~~kV~l~Ts-----~G~I~IEL~~d~aP~tv~NFl~Lc~-~g~--------Ydgt~FhRVip~fiIQgGDp~-g~G~gg 75 (344)
.+.+|.|.++ .|+|+|+||++.||+||+||++||+ .|| |+|+.||||+|+|||||||++ ++|+|+
T Consensus 2 ~~~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg 81 (170)
T 1qng_A 2 KRSKVFFDISIDNSNAGRIIFELFSDITPRTCENFRALCTGEKIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGG 81 (170)
T ss_dssp CSCEEEEEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTCEECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCC
T ss_pred CCCEEEEEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccCCcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCC
Confidence 3467888887 9999999999999999999999998 588 999999999999999999996 889999
Q ss_pred CcccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCC
Q 042423 76 ESIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDR 155 (344)
Q Consensus 76 ~siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~r 155 (344)
.|+||.+|++|.. .++|+++|+||||+.+ |++|+||||||+.++||||++|+|||+|++ |+++|++|+.+++ .+++
T Consensus 82 ~si~g~~f~dE~~-~l~h~~~G~lsmAn~g-p~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~-G~dvv~~I~~~~t-~~~~ 157 (170)
T 1qng_A 82 ESIYGRSFTDENF-NMKHDQPGLLSMANAG-PNTNSSQFFITLVPCPWLDGKHVVFGKVIE-GMNVVREMEKEGA-KSGY 157 (170)
T ss_dssp CBTTBSCBCCCCC-CSCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTTCC-TTCC
T ss_pred ccccCCccccccc-ccccCCCCEEEEeecC-CCCcccEEEEECCCCcccCCCeeEEEEEEC-CHHHHHHHHhCCC-CCCC
Confidence 9999999999976 6899999999999998 999999999999999999999999999996 8999999999999 6799
Q ss_pred CCCCCcEEEEEEEe
Q 042423 156 PLDPPPKLLSVEVL 169 (344)
Q Consensus 156 P~~~~i~I~~~~Vl 169 (344)
|..+ |+|.+|++|
T Consensus 158 P~~~-v~I~~cG~l 170 (170)
T 1qng_A 158 VKRS-VVITDCGEL 170 (170)
T ss_dssp CSSC-EEEEEEEEC
T ss_pred CCCC-eEEEeceeC
Confidence 9999 999999975
No 21
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=8.3e-45 Score=324.43 Aligned_cols=153 Identities=39% Similarity=0.699 Sum_probs=143.6
Q ss_pred cEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhc--C--------CccCceeEEeecCcEEEccCCC-CCCCCCC
Q 042423 13 GKVIVKTT-----HGPIDIELWPKEAPKAVRNFVQLCLE--G--------YFDNTIFHRIIKGFLVQGGDPT-GTGTGGE 76 (344)
Q Consensus 13 ~kV~l~Ts-----~G~I~IEL~~d~aP~tv~NFl~Lc~~--g--------~Ydgt~FhRVip~fiIQgGDp~-g~G~gg~ 76 (344)
.+|.|.++ .|+|+|+||++.||+||+||++||++ | ||+|+.||||+|+|||||||++ ++|+|+.
T Consensus 4 ~~v~~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~ 83 (173)
T 2igv_A 4 SKVFFDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGE 83 (173)
T ss_dssp CEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCC
T ss_pred CEEEEEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCCC
Confidence 47888876 99999999999999999999999987 5 7999999999999999999997 7899999
Q ss_pred cccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCC
Q 042423 77 SIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRP 156 (344)
Q Consensus 77 siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP 156 (344)
|+||.+|++|.+ .++|+++|+|||||.+ |++|+||||||+.++||||++|+|||+|++ |+++|++|+.++++ +++|
T Consensus 84 siyg~~f~dE~~-~l~h~~~G~lsmAn~g-p~tngSQFfIt~~~~~~LDg~~~vFG~Vv~-G~dvv~~I~~~~t~-~~~P 159 (173)
T 2igv_A 84 SIYGEKFPDENF-KEKHTGPGVLSMANAG-PNTNGSQFFLCTVKTEWLDGKHVVFGRVVE-GLDVVKAVESNGSQ-SGKP 159 (173)
T ss_dssp BTTBSCBCCCCC-CSCCCSTTEEEECCSS-TTCBSSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTTCCT-TSCC
T ss_pred ccCCCcccCccc-ccCCCCCeEEEEeeCC-CCCcceEEEEEcCCccccCCCeeEEEEEec-CHHHHHHHHhCCCC-CCCC
Confidence 999999999976 7999999999999998 999999999999999999999999999996 89999999999884 5899
Q ss_pred CCCCcEEEEEEEec
Q 042423 157 LDPPPKLLSVEVLW 170 (344)
Q Consensus 157 ~~~~i~I~~~~Vl~ 170 (344)
..+ |+|.+|++|.
T Consensus 160 ~~~-v~I~~~g~l~ 172 (173)
T 2igv_A 160 VKD-CMIADCGQLK 172 (173)
T ss_dssp SSC-EEEEEEEEEC
T ss_pred CCC-EEEEEeEEEc
Confidence 999 9999999984
No 22
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=2.5e-45 Score=325.04 Aligned_cols=151 Identities=33% Similarity=0.560 Sum_probs=139.6
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCCCcCCCccc
Q 042423 14 KVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFADEFHSRLRF 93 (344)
Q Consensus 14 kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~dE~~~rlk~ 93 (344)
+|+|+|++|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|||||||++.. .|.++||.+|++|+++.++|
T Consensus 1 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~--~g~~~~g~~~~dE~~~~l~~ 78 (164)
T 1lop_A 1 MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPG--MKQKATKEPIKNEANNGLKN 78 (164)
T ss_dssp CEEEEETTEEEEEEECTTTSHHHHHHHHHHHHTTTTTTEECCEEETTTEEEESSEETT--TEECCCCCCBCCCCCSSCCC
T ss_pred CEEEEeCCCCEEEEEeCCCCcHHHHHHHHHHhcCCCCCCEEEEEeCCceEecCCcccC--CCcCCCCCcccccccccccc
Confidence 4899999999999999999999999999999999999999999999999999999732 25678899999999888876
Q ss_pred ccCceeEEecCCCCCCCCceEEEecCCCCCCCCC--------CeEEEEEEcCceeeeeecccccCCC----CCCCCCCCc
Q 042423 94 NHRGLVACANAGSPHSNGSQFFISLDRCDWLDRK--------NTIFGKVTGDSIFNLLRLGEVDTDK----NDRPLDPPP 161 (344)
Q Consensus 94 ~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk--------~tVFGrVvg~gi~vL~kI~~v~td~----~~rP~~~~i 161 (344)
.+|+||||+.+.|++|+||||||+.+++|||++ |+|||+|++ |+++|++|+.++++. +++|+.+ +
T Consensus 79 -~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~-G~dvv~~I~~~~t~~~~~~~~~P~~~-v 155 (164)
T 1lop_A 79 -TRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVD-GMDEVDKIKGVATGRSGMHQDVPKED-V 155 (164)
T ss_dssp -CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEE-CHHHHHHHHTSCEEEETTEEEEESSC-C
T ss_pred -CccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEec-CHHHHHHHHhCCcCCccccCCCcCCC-e
Confidence 699999998644999999999999999999998 999999996 899999999999975 5899999 9
Q ss_pred EEEEEEEe
Q 042423 162 KLLSVEVL 169 (344)
Q Consensus 162 ~I~~~~Vl 169 (344)
+|.+|+|+
T Consensus 156 ~I~~~~v~ 163 (164)
T 1lop_A 156 IIESVTVS 163 (164)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEe
Confidence 99999986
No 23
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=1.6e-44 Score=322.67 Aligned_cols=154 Identities=38% Similarity=0.674 Sum_probs=143.4
Q ss_pred CcEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHh--cCC-ccCceeEEeecCcEEEccCCC-CCCCCCCcccCCC
Q 042423 12 KGKVIVK-----TTHGPIDIELWPKEAPKAVRNFVQLCL--EGY-FDNTIFHRIIKGFLVQGGDPT-GTGTGGESIYGGN 82 (344)
Q Consensus 12 ~~kV~l~-----Ts~G~I~IEL~~d~aP~tv~NFl~Lc~--~g~-Ydgt~FhRVip~fiIQgGDp~-g~G~gg~siyg~~ 82 (344)
..+|.|. |+.|+|+|+||++.||+||+||++||+ .|| |+|+.||||+|+|||||||++ ++|+|+.++||..
T Consensus 11 ~~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~ 90 (173)
T 2r99_A 11 NPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKK 90 (173)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSC
T ss_pred CCEEEEEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCCCc
Confidence 3568777 789999999999999999999999996 687 999999999999999999998 7899999999999
Q ss_pred CCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCCcE
Q 042423 83 FADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPPPK 162 (344)
Q Consensus 83 f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~i~ 162 (344)
|++|.. .++|+++|+||||+.+ |++|+||||||+.+++|||++|+|||+|++ |+++|++|+.++++ +++|..+ |+
T Consensus 91 f~dE~~-~l~h~~~G~lsmA~~g-p~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~-G~dvv~~I~~~~~~-~~~P~~~-v~ 165 (173)
T 2r99_A 91 FDDENF-ILKHTGPGLLSMANSG-PNTNGSQFFLTCDKTDWLDGKHVVFGEVTE-GLDVLRQIEAQGSK-DGKPKQK-VI 165 (173)
T ss_dssp BCCCCC-CSCCCSSSEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTTCCT-TCCCSSC-EE
T ss_pred ccCccc-CcccCCCcEEEEccCC-CCCcccEEEEECCCCCccCCCeeEEEEEEc-CHHHHHHHHhCCCC-CCCCCCC-eE
Confidence 999975 7899999999999998 999999999999999999999999999996 89999999999885 4899999 99
Q ss_pred EEEEEEec
Q 042423 163 LLSVEVLW 170 (344)
Q Consensus 163 I~~~~Vl~ 170 (344)
|.+|++|.
T Consensus 166 I~~cG~l~ 173 (173)
T 2r99_A 166 IADCGEYV 173 (173)
T ss_dssp EEEEEECC
T ss_pred EEEeeeEC
Confidence 99999873
No 24
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-45 Score=330.06 Aligned_cols=157 Identities=35% Similarity=0.622 Sum_probs=145.2
Q ss_pred CCCcEEEE-----EecceeEEEEEcCCCChHHHHHHHHHHh-----------cCCccCceeEEeecCcEEEccCCC-CCC
Q 042423 10 PTKGKVIV-----KTTHGPIDIELWPKEAPKAVRNFVQLCL-----------EGYFDNTIFHRIIKGFLVQGGDPT-GTG 72 (344)
Q Consensus 10 pt~~kV~l-----~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~-----------~g~Ydgt~FhRVip~fiIQgGDp~-g~G 72 (344)
..+.+|.| .|++|+|+|+||++.||+||+||++||+ .+||+|+.||||+|+|||||||++ ++|
T Consensus 17 ~~~~~vf~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G 96 (192)
T 2he9_A 17 RGSPQCHFDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNG 96 (192)
T ss_dssp --CCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSS
T ss_pred cCCCeEEEEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCeECCCEEEEEECCCEEEcCcccCCCC
Confidence 34456665 4789999999999999999999999996 579999999999999999999997 889
Q ss_pred CCCCcccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCC
Q 042423 73 TGGESIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDK 152 (344)
Q Consensus 73 ~gg~siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~ 152 (344)
+|++|+||.+|+||.. .++|+++|+|||||.+ |++|+||||||+.++||||++|+|||+|++ |+++|++|+.++++.
T Consensus 97 ~gg~siyg~~f~dE~~-~l~h~~~G~lsMAn~g-p~tngSQFFIt~~~~~~LDg~~tVFG~Vv~-Gmdvv~~I~~~~t~~ 173 (192)
T 2he9_A 97 KGGESIYGGYFKDENF-ILKHDRAFLLSMANRG-KHTNGSQFFITTKPAPHLDGVHVVFGLVIS-GFEVIEQIENLKTDA 173 (192)
T ss_dssp SCCCCTTSSCBCCCCC-CSCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTSCBCT
T ss_pred CCCCcccCCcccCccc-cCCCCCCeEEEEEeCC-CCCcceEEEEEcCCCcccCCCccEEEEEEe-CHHHHHHHHcCCcCC
Confidence 9999999999999986 6889999999999999 999999999999999999999999999996 899999999999999
Q ss_pred CCCCCCCCcEEEEEEEec
Q 042423 153 NDRPLDPPPKLLSVEVLW 170 (344)
Q Consensus 153 ~~rP~~~~i~I~~~~Vl~ 170 (344)
+++|+.+ |+|.+|+++.
T Consensus 174 ~~~P~~~-v~I~~~g~l~ 190 (192)
T 2he9_A 174 ASRPYAD-VRVIDCGVLA 190 (192)
T ss_dssp TSCBSSC-EEEEEEEECC
T ss_pred CCCCcCC-eEEEEeEEEc
Confidence 9999999 9999999975
No 25
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=8.6e-45 Score=322.15 Aligned_cols=152 Identities=32% Similarity=0.493 Sum_probs=140.1
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCCCcCCCcc
Q 042423 13 GKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFADEFHSRLR 92 (344)
Q Consensus 13 ~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~dE~~~rlk 92 (344)
..|+|+|++|+|+|+||++.||+||+||++||+.+||+|+.||||+++|||||||+++.+ +.+.++.+|++|....++
T Consensus 4 ~~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~--~~~~~~~~~~~E~~~~l~ 81 (167)
T 3s6m_A 4 SMVELHTNHGVIKLELDEAKAPKTVENFLNYVKKGHYDGTIFHRVINGFMIQGGGFEPGL--KQKPTDAPIANEANNGLK 81 (167)
T ss_dssp CEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHHTTTTTEECCEEETTTEEEESSEETTT--EECCCCCCBCCCGGGCCC
T ss_pred cEEEEEeCCceEEEEEeCCCCcHHHHHHHHHhhhcccCCCEeEEecCCcEEEeccccCCC--CCCCCCCccCCccccccc
Confidence 379999999999999999999999999999999999999999999999999999997543 335678899999887787
Q ss_pred cccCceeEEecCCCCCCCCceEEEecCCCCCCCCC--------CeEEEEEEcCceeeeeecccccCCC----CCCCCCCC
Q 042423 93 FNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRK--------NTIFGKVTGDSIFNLLRLGEVDTDK----NDRPLDPP 160 (344)
Q Consensus 93 ~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk--------~tVFGrVvg~gi~vL~kI~~v~td~----~~rP~~~~ 160 (344)
| .+|+||||+.+.|++|+||||||+.+++|||++ |+|||+|+. |+++|++|+.++++. +++|+.+
T Consensus 82 ~-~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~-G~dvv~~I~~~~t~~~~~~~~~P~~~- 158 (167)
T 3s6m_A 82 N-DTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVE-GQDIVDKIKAVKTGSKGFHQDVPNDD- 158 (167)
T ss_dssp C-CTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEE-CHHHHHHHTTSCBBC---CBTCBSSC-
T ss_pred C-CccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEc-CHHHHHHHHcCCcCCCcccCCCcCCC-
Confidence 5 899999999544999999999999999999998 999999996 899999999999987 6899999
Q ss_pred cEEEEEEEe
Q 042423 161 PKLLSVEVL 169 (344)
Q Consensus 161 i~I~~~~Vl 169 (344)
|+|.+|+||
T Consensus 159 v~I~~~~il 167 (167)
T 3s6m_A 159 VVIEKAVVV 167 (167)
T ss_dssp CEEEEEEEC
T ss_pred eEEEEEEEC
Confidence 999999986
No 26
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1.8e-44 Score=320.00 Aligned_cols=153 Identities=37% Similarity=0.640 Sum_probs=143.0
Q ss_pred cEEEEEe-----cceeEEEEEcCCCChHHHHHHHHHHh--cCC-ccCceeEEeecCcEEEccCCC-CCCCCCCcccCCCC
Q 042423 13 GKVIVKT-----THGPIDIELWPKEAPKAVRNFVQLCL--EGY-FDNTIFHRIIKGFLVQGGDPT-GTGTGGESIYGGNF 83 (344)
Q Consensus 13 ~kV~l~T-----s~G~I~IEL~~d~aP~tv~NFl~Lc~--~g~-Ydgt~FhRVip~fiIQgGDp~-g~G~gg~siyg~~f 83 (344)
.+|.|.+ ++|+|+|+||++.||+||+||++||+ .|| |+|+.||||+|+|||||||++ ++|+|+.|+||.+|
T Consensus 4 ~~v~~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f 83 (165)
T 2z6w_A 4 PLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRF 83 (165)
T ss_dssp CEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCB
T ss_pred CEEEEEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcc
Confidence 4677765 68999999999999999999999999 899 999999999999999999996 78999999999999
Q ss_pred CCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCCcEE
Q 042423 84 ADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPPPKL 163 (344)
Q Consensus 84 ~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~i~I 163 (344)
++|.. .++|+++|+||||+.+ |++|+||||||+.++||||++|+|||+|++ |+++|++|+.+++ .+++|..+ |+|
T Consensus 84 ~dE~~-~l~h~~~G~lsmA~~g-p~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~-G~dvv~~I~~~~~-~~~~P~~~-v~I 158 (165)
T 2z6w_A 84 PDENF-TLKHVGPGVLSMANAG-PNTNGSQFFICTIKTDWLDGKHVVFGHVIE-GMDVVKKIESFGS-KSGRTSKK-IVI 158 (165)
T ss_dssp CCCCC-CSCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHHTCC-TTSCCSSC-EEE
T ss_pred cCccc-ccccCCCCEEEEeeCC-CCCcccEEEEEcCCCcccCCCeeEEEEEEc-CHHHHHHHHhCCC-CCCCCCCc-EEE
Confidence 99964 7899999999999999 999999999999999999999999999996 8999999999885 67999999 999
Q ss_pred EEEEEec
Q 042423 164 LSVEVLW 170 (344)
Q Consensus 164 ~~~~Vl~ 170 (344)
.+|++|.
T Consensus 159 ~~~g~l~ 165 (165)
T 2z6w_A 159 TDCGQLS 165 (165)
T ss_dssp EEEEECC
T ss_pred EEeEEEC
Confidence 9999873
No 27
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.3e-44 Score=320.94 Aligned_cols=153 Identities=35% Similarity=0.556 Sum_probs=140.1
Q ss_pred CcEEEEEecceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCCCCcCCCc
Q 042423 12 KGKVIVKTTHGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFADEFHSRL 91 (344)
Q Consensus 12 ~~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~dE~~~rl 91 (344)
..+|+|+|+.|+|+|+||++.||+||+||++||+.|||+|+.||||+|+|||||||+++++. .+.++.+|++|+++.+
T Consensus 4 ~~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~g~Y~g~~FhRvi~~f~iQgGd~~~~~~--~~~~g~~~~dE~~~~l 81 (166)
T 1v9t_A 4 DPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQ--QKKPNPPIKNEADNGL 81 (166)
T ss_dssp SCEEEEEETTEEEEEEECTTTCHHHHHHHHHHHHTTTTTTCBEEEEETTTEEEESSBCTTCC--BCCCCCCBCCCGGGSC
T ss_pred CeEEEEEeCCccEEEEEcCCCCcHHHHHHHHHhccCCCCCCEEEEEECCcEEEcCCcCcCCC--CCCCCCcccccccccc
Confidence 45899999999999999999999999999999999999999999999999999999986543 3456889999998776
Q ss_pred ccccCceeEEecCCCCCCCCceEEEecCCCCCCCCC-----CeEEEEEEcCceeeeeecccccCCC----CCCCCCCCcE
Q 042423 92 RFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRK-----NTIFGKVTGDSIFNLLRLGEVDTDK----NDRPLDPPPK 162 (344)
Q Consensus 92 k~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk-----~tVFGrVvg~gi~vL~kI~~v~td~----~~rP~~~~i~ 162 (344)
+ +.+|+||||+.+.|++|+||||||+.+++|||++ |+|||+|++ |+++|++|+.++++. +++|+.+ ++
T Consensus 82 ~-~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~-G~dvv~~I~~~~~~~~~~~~~~P~~~-v~ 158 (166)
T 1v9t_A 82 R-NTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVK-GMDVADKISQVPTHDVGPYQNVPSKP-VV 158 (166)
T ss_dssp C-CCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEE-CHHHHHHHHTSCEEEETTEEEEESSC-CB
T ss_pred c-CCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEec-CHHHHHHHHhCCCCCCCccCCCcCCC-eE
Confidence 5 5799999999755999999999999999999998 999999996 899999999999986 4799999 99
Q ss_pred EEEEEEe
Q 042423 163 LLSVEVL 169 (344)
Q Consensus 163 I~~~~Vl 169 (344)
|.+|+|+
T Consensus 159 I~~~~v~ 165 (166)
T 1v9t_A 159 ILSATVL 165 (166)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 9999986
No 28
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=3.4e-44 Score=317.77 Aligned_cols=146 Identities=36% Similarity=0.684 Sum_probs=139.6
Q ss_pred ecceeEEEEEcCCCChHHHHHHHHHHh--cCC-ccCceeEEeecCcEEEccC-CCCCCCCCCcccCCCCCCCcCCCcccc
Q 042423 19 TTHGPIDIELWPKEAPKAVRNFVQLCL--EGY-FDNTIFHRIIKGFLVQGGD-PTGTGTGGESIYGGNFADEFHSRLRFN 94 (344)
Q Consensus 19 Ts~G~I~IEL~~d~aP~tv~NFl~Lc~--~g~-Ydgt~FhRVip~fiIQgGD-p~g~G~gg~siyg~~f~dE~~~rlk~~ 94 (344)
|+.|+|+|+||++.||+||+||++||+ .|| |+|+.||||+|+||||||| +.++|+|+.++||.+|++|.. .++|+
T Consensus 14 t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~~~dE~~-~l~h~ 92 (164)
T 3pmp_A 14 KPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEKFADENF-QVKHT 92 (164)
T ss_dssp EEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCBCCCCC-CSCCC
T ss_pred EEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCcccccccc-ccCcC
Confidence 899999999999999999999999999 788 9999999999999999999 668999999999999999955 78999
Q ss_pred cCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCCcEEEEEEEe
Q 042423 95 HRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPPPKLLSVEVL 169 (344)
Q Consensus 95 ~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~i~I~~~~Vl 169 (344)
++|+||||+.+ |++|+||||||+.++||||++|+|||+|+. |+++|++|+.++++ +++|..+ |+|.+|++|
T Consensus 93 ~~G~lsma~~g-~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~-G~~vv~~I~~~~~~-~~~P~~~-v~I~~cg~l 163 (164)
T 3pmp_A 93 KPGLLSMANAG-ANTNGSQFFITTVPTSWLDGKHVVFGEVIE-GLDIVRKVEGKGSA-SGKTNAT-IKITDCGTV 163 (164)
T ss_dssp STTEEEECBSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTTCCT-TCCCSSC-EEEEEEEEC
T ss_pred CCcEEEEeeCC-CCCcccEEEEECCCChhhCCCccEEEEEeC-CHHHHHHHHhCCCC-CCCcccC-EEEEeCeEE
Confidence 99999999999 999999999999999999999999999996 89999999999987 6999999 999999987
No 29
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=9.5e-45 Score=338.16 Aligned_cols=161 Identities=22% Similarity=0.385 Sum_probs=144.5
Q ss_pred cEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHhc-----------------C--C-ccCceeEEeecCcEEEccC
Q 042423 13 GKVIVK-----TTHGPIDIELWPKEAPKAVRNFVQLCLE-----------------G--Y-FDNTIFHRIIKGFLVQGGD 67 (344)
Q Consensus 13 ~kV~l~-----Ts~G~I~IEL~~d~aP~tv~NFl~Lc~~-----------------g--~-Ydgt~FhRVip~fiIQgGD 67 (344)
.+|.|. |+.|+|+|+||++.||+||+||++||++ | | |+|+.||||+++|||||||
T Consensus 15 p~v~~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd 94 (234)
T 2ose_A 15 PRVYMDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGD 94 (234)
T ss_dssp CEEEEEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECC
T ss_pred CEEEEEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCC
Confidence 468887 9999999999999999999999999994 4 7 9999999999999999999
Q ss_pred -CCCCCCCCCcccCCC-----CCCCcCCCcccccCceeEEec----CCCCCCCCceEEEecCC------CCCCCCCCeEE
Q 042423 68 -PTGTGTGGESIYGGN-----FADEFHSRLRFNHRGLVACAN----AGSPHSNGSQFFISLDR------CDWLDRKNTIF 131 (344)
Q Consensus 68 -p~g~G~gg~siyg~~-----f~dE~~~rlk~~~rGlVsma~----~g~~~sngSQFFITL~~------~p~LDgk~tVF 131 (344)
+.++|+||.|+||.. |+ ++ .++|+++|+||||| .| |++||||||||+.+ ++|||++|+||
T Consensus 95 ~~~g~G~Gg~siyg~~~~p~~f~-~~--~l~h~~~G~lsMAn~~~~~g-pntngSQFFIt~~~~~~~~g~p~LDg~~tVF 170 (234)
T 2ose_A 95 IYNSNGSSAGTVYCDEPIPPVFG-DY--FYPHESKGLLSLVPYTDESG-NRYYDSTFMITLDDIRPSNVLDELDRDQVVI 170 (234)
T ss_dssp CC----CCCCCTTTTCCBCCCCC-SC--CCCSCSTTEEEECCEECTTS-CEEBCSCEEEESSCCCTTSSGGGSCTTSEEE
T ss_pred ccCCCCCCCccccCCccCccccc-Cc--CccCCCCCEEEEecccccCC-CCCccceEEEEecCccccCCCcccCCCeeEE
Confidence 579999999999998 76 43 68899999999999 88 99999999999999 99999999999
Q ss_pred EEEEcCceeeeeecccccCCCCCCCCCCCcEEEEEEEecCCCCcccCC
Q 042423 132 GKVTGDSIFNLLRLGEVDTDKNDRPLDPPPKLLSVEVLWNPFEDIVPR 179 (344)
Q Consensus 132 GrVvg~gi~vL~kI~~v~td~~~rP~~~~i~I~~~~Vl~~PF~Di~~r 179 (344)
|+|++ |+++|++|+.++++.+++|..+ |+|.+|+++.+||+|..++
T Consensus 171 G~Vv~-GmdVv~~I~~~~t~~~~~P~~~-V~I~~~~~l~~p~~~~~k~ 216 (234)
T 2ose_A 171 GQVYG-GLDVLDKINSMIKPYAGRKYPT-FSIGKCGAYLDSSQAQRKR 216 (234)
T ss_dssp EEEEE-CHHHHHHHHHHTCCCTTCCCCC-EEEEEEEECCCHHHHCC--
T ss_pred EEEeC-CHHHHHHHHhCCcCCCCCccCC-EEEEEEEEecCCccccccc
Confidence 99996 8999999999999999999999 9999999999999986544
No 30
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.9e-44 Score=333.83 Aligned_cols=158 Identities=38% Similarity=0.735 Sum_probs=147.8
Q ss_pred CCCCcEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhcC--------CccCceeEEeecCcEEEccCCC-CCCCC
Q 042423 9 PPTKGKVIVKTT-----HGPIDIELWPKEAPKAVRNFVQLCLEG--------YFDNTIFHRIIKGFLVQGGDPT-GTGTG 74 (344)
Q Consensus 9 Ppt~~kV~l~Ts-----~G~I~IEL~~d~aP~tv~NFl~Lc~~g--------~Ydgt~FhRVip~fiIQgGDp~-g~G~g 74 (344)
.|...+|.|.|+ .|+|+|+||++.||+||+||++||+++ ||+|+.||||+|+|||||||++ ++|+|
T Consensus 56 ~~~~~~V~~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~G 135 (229)
T 1z81_A 56 NPSNPVVFMDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSG 135 (229)
T ss_dssp STTCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCC
T ss_pred CCCCcEEEEEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCC
Confidence 345678999866 899999999999999999999999987 7999999999999999999986 88999
Q ss_pred CCcccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEc-CceeeeeecccccCCCC
Q 042423 75 GESIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTG-DSIFNLLRLGEVDTDKN 153 (344)
Q Consensus 75 g~siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg-~gi~vL~kI~~v~td~~ 153 (344)
+.++||.+|++|.. .++|+++|+|||||.+ |++|+||||||+.++++||++|+|||+|++ +|+++|++|+.++++.+
T Consensus 136 g~siyg~~f~dE~~-~l~h~~~G~LsMAn~g-pntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~ 213 (229)
T 1z81_A 136 SLSIYGEKFDDENF-DIKHDKEGLLSMANSG-PNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPY 213 (229)
T ss_dssp CCBTTBSCCCCCCC-CSCCCSTTEEEECCSS-SSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTT
T ss_pred CCccCCCccccccc-ccccCCCcEEEeccCC-CCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCC
Confidence 99999999999975 7899999999999999 999999999999999999999999999993 49999999999999987
Q ss_pred -CCCCCCCcEEEEEEEe
Q 042423 154 -DRPLDPPPKLLSVEVL 169 (344)
Q Consensus 154 -~rP~~~~i~I~~~~Vl 169 (344)
++|+.+ |+|.+|++|
T Consensus 214 ~~~P~~~-V~I~~cG~l 229 (229)
T 1z81_A 214 IYKPKIP-INVVECGEL 229 (229)
T ss_dssp TCCBSSC-EEEEEEEEC
T ss_pred CCCCCCC-eEEEeCeeC
Confidence 999999 999999975
No 31
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=8.9e-45 Score=324.06 Aligned_cols=149 Identities=40% Similarity=0.758 Sum_probs=112.5
Q ss_pred EecceeEEEEEcCCCChHHHHHHHHHHh--cCC-ccCceeEEeecCcEEEccC-CCCCCCCCCcccCCCCCCCcCCCccc
Q 042423 18 KTTHGPIDIELWPKEAPKAVRNFVQLCL--EGY-FDNTIFHRIIKGFLVQGGD-PTGTGTGGESIYGGNFADEFHSRLRF 93 (344)
Q Consensus 18 ~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~--~g~-Ydgt~FhRVip~fiIQgGD-p~g~G~gg~siyg~~f~dE~~~rlk~ 93 (344)
.|++|+|+|+||++.||+||+||++||+ .|| |+|+.||||+|+||||||| +.++|+|++|+||.+|++|. ..++|
T Consensus 18 ~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f~dE~-~~~~h 96 (172)
T 2c3b_A 18 ETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKFADEN-FSRKH 96 (172)
T ss_dssp CCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTTEEEECC-----------------------CHHH
T ss_pred ecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCcccCcc-ccccc
Confidence 4888999999999999999999999999 778 9999999999999999999 78999999999999999995 47889
Q ss_pred ccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEc-CceeeeeecccccCCCCC-CCCCCCcEEEEEEEe
Q 042423 94 NHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTG-DSIFNLLRLGEVDTDKND-RPLDPPPKLLSVEVL 169 (344)
Q Consensus 94 ~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg-~gi~vL~kI~~v~td~~~-rP~~~~i~I~~~~Vl 169 (344)
+++|+||||+.+ |++|+||||||+.++||||++|+|||+|++ .|+++|++|+.++++..+ +|..+ |+|.+|++|
T Consensus 97 ~~~G~lsmA~~g-p~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~-v~I~~cG~l 172 (172)
T 2c3b_A 97 DKKGILSMANAG-PNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTR-PKIVNCGEL 172 (172)
T ss_dssp HHTCEEEEC----------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSC-CEEEEEEEC
T ss_pred CCCeEEEEeeCC-CCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCC-eEEEeCeeC
Confidence 999999999998 999999999999999999999999999994 289999999999998765 99999 999999975
No 32
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=9.1e-44 Score=320.69 Aligned_cols=158 Identities=35% Similarity=0.616 Sum_probs=144.7
Q ss_pred CCCCCcEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhcCC---ccCceeEEeecCcEEEccCC-CCCCCCCCcc
Q 042423 8 EPPTKGKVIVKTT-----HGPIDIELWPKEAPKAVRNFVQLCLEGY---FDNTIFHRIIKGFLVQGGDP-TGTGTGGESI 78 (344)
Q Consensus 8 ePpt~~kV~l~Ts-----~G~I~IEL~~d~aP~tv~NFl~Lc~~g~---Ydgt~FhRVip~fiIQgGDp-~g~G~gg~si 78 (344)
+|..+.+|.|.|+ .|+|+|+||++.||+||+||++||++++ |+|+.||||+|+|||||||+ .++|+|+.++
T Consensus 18 ~~~~~p~v~~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si 97 (184)
T 3rdd_A 18 QGMVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSI 97 (184)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBT
T ss_pred ccCCCCEEEEEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCcEEEeCCCCCCCCCCCccc
Confidence 3445678999988 9999999999999999999999998655 99999999999999999995 5889999999
Q ss_pred cCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCC
Q 042423 79 YGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLD 158 (344)
Q Consensus 79 yg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~ 158 (344)
||..|++|.. .++|+.+|+||||+.+ |++|+||||||+.++++||++|+|||+|+. |+++|++|+.+++ .+++|..
T Consensus 98 ~g~~~~de~~-~l~h~~~G~lsmA~~g-p~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~-G~dvv~~I~~~~~-~~g~P~~ 173 (184)
T 3rdd_A 98 YGEKFEDENF-ILKHTGPGILSMANAG-PNTNGSQFFICTAKTEWLDGKHVVFGKVKE-GMNIVEAMERFGS-RNGKTSK 173 (184)
T ss_dssp TBSCBCCCCC-CSCCCSTTEEEECCSS-TTCBSSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTTCC-TTSCCSS
T ss_pred CCCcccCccc-ccccCCCcEEEEEeCC-CCCcccEEEEEeCCchhhCCCceEEEEEec-CHHHHHHHHhcCC-CCCCCcC
Confidence 9999999976 6889999999999998 999999999999999999999999999996 8999999999987 4689999
Q ss_pred CCcEEEEEEEec
Q 042423 159 PPPKLLSVEVLW 170 (344)
Q Consensus 159 ~~i~I~~~~Vl~ 170 (344)
+ |+|.+|++|.
T Consensus 174 ~-v~I~~cG~l~ 184 (184)
T 3rdd_A 174 K-ITIADCGQLE 184 (184)
T ss_dssp C-EEEEEEEECC
T ss_pred C-eEEEeCeEEC
Confidence 9 9999999973
No 33
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=6.8e-44 Score=322.12 Aligned_cols=156 Identities=38% Similarity=0.672 Sum_probs=142.3
Q ss_pred CCCCCcEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHh--cCC--------ccCceeEEeecCcEEEccCCC-CC
Q 042423 8 EPPTKGKVIVKTT-----HGPIDIELWPKEAPKAVRNFVQLCL--EGY--------FDNTIFHRIIKGFLVQGGDPT-GT 71 (344)
Q Consensus 8 ePpt~~kV~l~Ts-----~G~I~IEL~~d~aP~tv~NFl~Lc~--~g~--------Ydgt~FhRVip~fiIQgGDp~-g~ 71 (344)
....+.+|.|.++ .|+|+|+||++.||+||+||++||+ .|| |+|+.||||+|+|||||||++ ++
T Consensus 15 ~~~~~~~v~~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~ 94 (186)
T 2poy_A 15 YFQGNPVVYFDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGD 94 (186)
T ss_dssp ---CCCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSS
T ss_pred ccCCCCEEEEEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCCEEEeCCCCCCC
Confidence 3445568888876 9999999999999999999999997 588 999999999999999999987 78
Q ss_pred CCCCCcccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCC
Q 042423 72 GTGGESIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTD 151 (344)
Q Consensus 72 G~gg~siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td 151 (344)
|+|+.|+||.+|++|.. .++|+++|+||||+.+ |++|+||||||+.++||||++|+|||+|++ |+++|++|+.+++
T Consensus 95 G~gg~si~g~~f~dE~~-~l~h~~~G~lsMAn~g-pntngSQFFIt~~~~~~LDg~~tVFG~Vv~-Gmdvv~~I~~~~t- 170 (186)
T 2poy_A 95 GTGGESIYGSKFRDENF-VYTHDAPFLLSMANAG-PNTNGSQFFITTVPCPWLDGKHVVFGKVLE-GMEVVKSIEKCGS- 170 (186)
T ss_dssp SSCCCCTTC-CBCCCCC-CSCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHHTCC-
T ss_pred CCCCCccCCCcccCccc-ccccCCCcEEEEeeCC-CCCcccEEEEECCCCcccCCCeeEEEEEec-CHHHHHHHHhCCC-
Confidence 99999999999999976 7899999999999998 999999999999999999999999999996 8999999999998
Q ss_pred CCCCCCCCCcEEEEEEE
Q 042423 152 KNDRPLDPPPKLLSVEV 168 (344)
Q Consensus 152 ~~~rP~~~~i~I~~~~V 168 (344)
.+++|+.+ |+|.+|++
T Consensus 171 ~~~~P~~~-v~I~~cG~ 186 (186)
T 2poy_A 171 QNGKPTKS-VCITASGV 186 (186)
T ss_dssp TTSCCSSC-EEEEEEEC
T ss_pred CCCCCCCC-EEEEeCCC
Confidence 56899999 99999974
No 34
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=3.6e-43 Score=341.84 Aligned_cols=158 Identities=37% Similarity=0.597 Sum_probs=149.2
Q ss_pred CcEEEEEec-----ceeEEEEEcCCCChHHHHHHHHHHhc--------C---CccCceeEEeecCcEEEccCCC-CCCCC
Q 042423 12 KGKVIVKTT-----HGPIDIELWPKEAPKAVRNFVQLCLE--------G---YFDNTIFHRIIKGFLVQGGDPT-GTGTG 74 (344)
Q Consensus 12 ~~kV~l~Ts-----~G~I~IEL~~d~aP~tv~NFl~Lc~~--------g---~Ydgt~FhRVip~fiIQgGDp~-g~G~g 74 (344)
+.+|.|.|+ .|+|+|+||++.||+||+||+.||++ | ||+||.||||+|+|||||||++ ++|+|
T Consensus 15 ~~~v~~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g 94 (370)
T 1ihg_A 15 NPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTG 94 (370)
T ss_dssp SCEEEEEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSC
T ss_pred CCeEEEEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCC
Confidence 578999988 89999999999999999999999998 6 6999999999999999999999 89999
Q ss_pred CCcccCCCCCCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCC
Q 042423 75 GESIYGGNFADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKND 154 (344)
Q Consensus 75 g~siyg~~f~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~ 154 (344)
|.++||.+|++|.+ .++|+++|+|+||+.| |++||||||||+.++||||++|||||+|+. |+++|.+|+.++++. +
T Consensus 95 ~~~~~~~~~~~e~~-~~~~~~~g~l~ma~~~-~~~~~sqffi~~~~~~~ld~~~~vfG~v~~-g~~v~~~i~~~~~~~-~ 170 (370)
T 1ihg_A 95 GESIYGEKFEDENF-HYKHDKEGLLSMANAG-SNTNGSQFFITTVPTPHLDGKHVVFGQVIK-GMGVAKILENVEVKG-E 170 (370)
T ss_dssp CCBTTBSCBCCCCC-CBCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTSCEET-T
T ss_pred CCCCCCCCcCCCcC-CcCCCCCeEEEEeeCC-CCCCCceEEEeCCCCcccCCCceEEEEEec-CHHHHHHHHcCCCCC-C
Confidence 99999999999987 6889999999999999 999999999999999999999999999995 899999999999987 9
Q ss_pred CCCCCCcEEEEEEEecCCCC
Q 042423 155 RPLDPPPKLLSVEVLWNPFE 174 (344)
Q Consensus 155 rP~~~~i~I~~~~Vl~~PF~ 174 (344)
+|..+ ++|.+|+++..+.+
T Consensus 171 ~P~~~-v~I~~~g~l~~~~~ 189 (370)
T 1ihg_A 171 KPAKL-CVIAECGELKEGDD 189 (370)
T ss_dssp EESSC-EEEEEEEEECTTCC
T ss_pred cccee-EEEEEEEEeccCcc
Confidence 99999 99999999976543
No 35
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=5.6e-43 Score=317.73 Aligned_cols=153 Identities=38% Similarity=0.700 Sum_probs=143.2
Q ss_pred cEEEEE-----ecceeEEEEEcCCCChHHHHHHHHHHh--cCC-ccCceeEEeecCcEEEccC-CCCCCCCCCcccCCCC
Q 042423 13 GKVIVK-----TTHGPIDIELWPKEAPKAVRNFVQLCL--EGY-FDNTIFHRIIKGFLVQGGD-PTGTGTGGESIYGGNF 83 (344)
Q Consensus 13 ~kV~l~-----Ts~G~I~IEL~~d~aP~tv~NFl~Lc~--~g~-Ydgt~FhRVip~fiIQgGD-p~g~G~gg~siyg~~f 83 (344)
.+|.|. |+.|+|+|+||++.||+||+||++||+ .|| |+|+.||||+|+|+||||| +.++|+|+.++||.+|
T Consensus 28 p~v~~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f 107 (193)
T 3k2c_A 28 GNVYFDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKF 107 (193)
T ss_dssp TCEEEEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCB
T ss_pred CEEEEEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCCCcc
Confidence 468877 779999999999999999999999999 677 9999999999999999999 5588999999999999
Q ss_pred CCCcCCCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCC--CCCc
Q 042423 84 ADEFHSRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPL--DPPP 161 (344)
Q Consensus 84 ~dE~~~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~--~~~i 161 (344)
++|.. .++|+.+|+||||+.+ |++|+||||||++++++||++|+|||+|+. |+++|++|+.++++ +++|. .+ |
T Consensus 108 ~dE~~-~l~h~~~G~lsmAn~g-p~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~-Gmdvv~~I~~~~t~-~g~P~~~~~-v 182 (193)
T 3k2c_A 108 PDENF-ELKHTKEGILSMANCG-AHTNGSQFFITLGKTQWLDEKHVVFGEVVE-GMDVVHKIAKYGSE-SGQVKKGYR-I 182 (193)
T ss_dssp CCCCC-CSCCCSTTEEEECCSS-TTCBCSCEEEESSCCGGGTTTSCEEEEEEE-CHHHHHHHHTTCCT-TCCCCTTCC-E
T ss_pred ccccc-ccccCCCcEEEEEeCC-CCCCccEEEEECCCCcccCCCccEEEEEeC-CHHHHHHHHhcCCC-CCcCccCcc-E
Confidence 99955 7899999999999999 999999999999999999999999999996 89999999999997 58999 99 9
Q ss_pred EEEEEEEec
Q 042423 162 KLLSVEVLW 170 (344)
Q Consensus 162 ~I~~~~Vl~ 170 (344)
+|.+|++|.
T Consensus 183 ~I~~cG~l~ 191 (193)
T 3k2c_A 183 EIRDCGVLG 191 (193)
T ss_dssp EEEEEEECC
T ss_pred EEEEceEeC
Confidence 999999985
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=100.00 E-value=3.1e-38 Score=310.47 Aligned_cols=156 Identities=30% Similarity=0.383 Sum_probs=136.5
Q ss_pred CCCCCCCCCCCcE--EEEEec--------ceeEEEEEcCCCChHHHHHHHHHHhcCCccCceeEEeecCcEEEccCCCCC
Q 042423 2 SSVYVLEPPTKGK--VIVKTT--------HGPIDIELWPKEAPKAVRNFVQLCLEGYFDNTIFHRIIKGFLVQGGDPTGT 71 (344)
Q Consensus 2 s~~y~~ePpt~~k--V~l~Ts--------~G~I~IEL~~d~aP~tv~NFl~Lc~~g~Ydgt~FhRVip~fiIQgGDp~g~ 71 (344)
+..|..-|..+++ |.|+|+ .|+|+|+||++.||+||+||++||+.|||+|+.|||| ++||||||||+++
T Consensus 158 P~~y~~~P~l~gra~V~m~t~~~~~~~~~~G~I~IeL~~d~AP~Tv~NFl~L~~~GfYdGt~FHRV-~gFmIQgGDp~g~ 236 (369)
T 3rfy_A 158 PEEYRNMPLLKGRASVDMKVKIKDNPNIEDCVFRIVLDGYNAPVTAGNFVDLVERHFYDGMEIQRS-DGFVVQTGDPEGP 236 (369)
T ss_dssp CSSCTTSCEECSEEEEEEEEECCSCSSCSEEEEEEEEETTTCHHHHHHHHHHHHTTTTTTEECEEE-EEEEECCCCCCCC
T ss_pred chhcccCccCCCCeEEEEEEeccCCCcccceEEEEEEeCCCCcHHHHHHHHHhhcCCcCCCeeeee-CCeeEecCCCCCC
Confidence 4567777877666 678887 8999999999999999999999999999999999999 9999999999988
Q ss_pred CCC---------------------CCcccCCCCCCCc----CCCcccccCceeEEecC-CCCCCCCceEEEec-------
Q 042423 72 GTG---------------------GESIYGGNFADEF----HSRLRFNHRGLVACANA-GSPHSNGSQFFISL------- 118 (344)
Q Consensus 72 G~g---------------------g~siyg~~f~dE~----~~rlk~~~rGlVsma~~-g~~~sngSQFFITL------- 118 (344)
|+| +.++|+.+|.+|. ++.++|+.+|+|||||. ..||+||||||||+
T Consensus 237 G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~ 316 (369)
T 3rfy_A 237 AEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTP 316 (369)
T ss_dssp CSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECS
T ss_pred CCCccCcccCcCcccCccccccCCCCCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCC
Confidence 877 5678888888874 45788999999999998 23999999999999
Q ss_pred CCCCCCCCCCeEEEEEEcCceeeeeecccccCCCCCCCCCCCcEEEEEEEecC
Q 042423 119 DRCDWLDRKNTIFGKVTGDSIFNLLRLGEVDTDKNDRPLDPPPKLLSVEVLWN 171 (344)
Q Consensus 119 ~~~p~LDgk~tVFGrVvg~gi~vL~kI~~v~td~~~rP~~~~i~I~~~~Vl~~ 171 (344)
.+++|||++|||||+|++ |+++|++|+.. + +|.+++|+.+
T Consensus 317 ~~~~~LDgkytVFG~Vve-GmdVVdkI~~G----------D--~I~sv~I~~g 356 (369)
T 3rfy_A 317 SNSNILDGRYAVFGYVTD-NEDFLADLKVG----------D--VIESIQVVSG 356 (369)
T ss_dssp CCCSSSCSCEEEEEEEEE-STTGGGGCCTT----------C--EEEEEEEEEC
T ss_pred CCCcccCCCeeEEEEEec-CHHHHHHHhCC----------C--ceEEEEEecC
Confidence 578999999999999996 89999999763 2 5888988853
No 37
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=83.80 E-value=4.4 Score=34.88 Aligned_cols=32 Identities=19% Similarity=0.351 Sum_probs=28.2
Q ss_pred cEEEEEecceeEEEEEcCCCChHHHHHHHHHH
Q 042423 13 GKVIVKTTHGPIDIELWPKEAPKAVRNFVQLC 44 (344)
Q Consensus 13 ~kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc 44 (344)
-++.|...-..++++|+.+.||+||+.|+++.
T Consensus 30 ~~I~i~~~~~~~~a~L~D~~aP~Ta~~f~~~L 61 (153)
T 2nnz_A 30 MRLRIRFESAECEVELYEEWAPETVRAIADAL 61 (153)
T ss_dssp CCEEEEETTEEEEECCCTTSCHHHHHHHHHTC
T ss_pred eEEEEEECCEEEEEEEcCCCCHHHHHHHHHhC
Confidence 45778888889999999999999999999975
No 38
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=44.32 E-value=1.4e+02 Score=24.95 Aligned_cols=96 Identities=15% Similarity=0.066 Sum_probs=55.2
Q ss_pred EEEEEecceeEEEEEcCCCChHHHHHHHHHHh----cCCccCceeEEeecCcEEEccCCCCCCCCCCcccCCCCC-CCcC
Q 042423 14 KVIVKTTHGPIDIELWPKEAPKAVRNFVQLCL----EGYFDNTIFHRIIKGFLVQGGDPTGTGTGGESIYGGNFA-DEFH 88 (344)
Q Consensus 14 kV~l~Ts~G~I~IEL~~d~aP~tv~NFl~Lc~----~g~Ydgt~FhRVip~fiIQgGDp~g~G~gg~siyg~~f~-dE~~ 88 (344)
+|.|-...+.++.+|+. .|.||+.|+++.= -..|. ..++-..|-. ++ +|.
T Consensus 14 ~~~~~~~~~~v~a~L~D--np~Ta~~~~~~LPl~~~~~~~g-~E~y~~~p~~---------------------l~~~e~- 68 (136)
T 1zx8_A 14 RVELLFESGKCVIDLNE--EYEVVKLLKEKIPFESVVNTWG-EEIYFSTPVN---------------------VQKMEN- 68 (136)
T ss_dssp EEEEECSSCEEEEEEET--TSHHHHHHHHHCSEEEECEESS-SEEEEECSCC---------------------CCCCSS-
T ss_pred EEEEeeCCcEEEEEEcC--CHHHHHHHHHHCCcEEEHHHhC-CcEEEECCcc---------------------CCCCCC-
Confidence 56677777889999974 4889999998762 11242 3333222211 11 011
Q ss_pred CCcccccCceeEEecCCCCCCCCceEEEecCCCCCCCC------CCeEEEEEEcCceeee
Q 042423 89 SRLRFNHRGLVACANAGSPHSNGSQFFISLDRCDWLDR------KNTIFGKVTGDSIFNL 142 (344)
Q Consensus 89 ~rlk~~~rGlVsma~~g~~~sngSQFFITL~~~p~LDg------k~tVFGrVvg~gi~vL 142 (344)
++.. ...|-|++-..+ .-|-|-+++.|...+ ...+||||++ ++..|
T Consensus 69 ~~~~-~~~GDIaYw~pg------g~LaIFyg~~p~s~~e~~~a~~v~~lGrI~~-~l~~l 120 (136)
T 1zx8_A 69 PREV-VEIGDVGYWPPG------KALCLFFGKTPMSDDKIQPASAVNVIGKIVE-GLEDL 120 (136)
T ss_dssp EESS-BCTTEEEEEGGG------TEEEEESSCCTTCSSSBCCSSCEEEEEEEEE-CGGGG
T ss_pred CCcc-CCCCcEEEeCCC------CEEEEEeCCCccccCccccCcCcEEEEEEcc-CHHHH
Confidence 1111 256777765443 356666777654332 3689999996 55444
No 39
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=29.69 E-value=45 Score=29.66 Aligned_cols=32 Identities=9% Similarity=0.048 Sum_probs=25.1
Q ss_pred cEEEEEeccee--EEEEEcCCCChHHHHHHHHHH
Q 042423 13 GKVIVKTTHGP--IDIELWPKEAPKAVRNFVQLC 44 (344)
Q Consensus 13 ~kV~l~Ts~G~--I~IEL~~d~aP~tv~NFl~Lc 44 (344)
..+.++-..+. ++.+|..+.||+||+.|.++.
T Consensus 22 r~i~itl~~~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 22 RYINITLEKRGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp CEEEEEETTTTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred eEEEEEEecCCeEEEEEEccccChHHHHHHHHhC
Confidence 45666655554 688999999999999999965
No 40
>2khf_A PLNJ; anti-microbial, bacteriocin, peptide, two-peptide, antimicrobial protein; NMR {Lactobacillus plantarum} PDB: 2khg_A
Probab=20.90 E-value=26 Score=21.03 Aligned_cols=16 Identities=25% Similarity=0.536 Sum_probs=13.6
Q ss_pred HHHHHHHHhcCCccCc
Q 042423 37 VRNFVQLCLEGYFDNT 52 (344)
Q Consensus 37 v~NFl~Lc~~g~Ydgt 52 (344)
-.||..-.+.|||+|-
T Consensus 3 wknfwsslrkgfydge 18 (26)
T 2khf_A 3 WKNFWSSLRKGFYDGE 18 (26)
T ss_dssp HHHHHHHHHHHHTTTH
T ss_pred HHHHHHHHHhhcccch
Confidence 3689999999999984
Done!