BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 042426
(270 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 405 bits (1042), Expect = e-114, Method: Compositional matrix adjust.
Identities = 192/269 (71%), Positives = 228/269 (84%)
Query: 2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGIL 61
P++GYGV+KVL+S P ++K DLVWG+T WEE+S+I Q L KI D VPL YYTGIL
Sbjct: 75 SPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKIHDKDVPLSYYTGIL 134
Query: 62 GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
GMPG+TAY G HE+CSPKKGE V+VSAASGAVGQLVGQF K++GCYVVGSA SKEKVDLL
Sbjct: 135 GMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLL 194
Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
K KFGFD+AFNYKEE DL AAL R FP+GIDIYFENVGGKMLDAVL+NM++ G IAVCGM
Sbjct: 195 KSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGM 254
Query: 182 ISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIA 241
ISQYN+E+ EGVHNL ++ KRI MEGFL D+YH YPK+LE+V+ IK GK+VYVED+A
Sbjct: 255 ISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVA 314
Query: 242 EGLEKAPSALVGIFTGQNVGKQLVAVARE 270
GLE AP+ALVG+F+G+N+GKQ+V V+RE
Sbjct: 315 HGLESAPTALVGLFSGRNIGKQVVMVSRE 343
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 392 bits (1008), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/270 (69%), Positives = 222/270 (82%), Gaps = 1/270 (0%)
Query: 2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQS-PQLLIKILDTSVPLPYYTGI 60
QP+ GYGVS++++S HP+YKK DL+WG+ +WEE+S+I KI T VPL YYTG+
Sbjct: 76 QPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGL 135
Query: 61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
LGMPG+TAY G +E+CSPK+GE VYVSAASGAVGQLVGQ K++GCYVVGSA SKEKVDL
Sbjct: 136 LGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDL 195
Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
LK KFGFDDAFNYKEE DL AAL RCFP GIDIYFENVGGKMLDAVL+NM + G IAVCG
Sbjct: 196 LKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCG 255
Query: 181 MISQYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDI 240
MISQYN+E EGVHNL ++ KR ++GF+ DFY +Y KFLE V+ I+EGK+ YVED+
Sbjct: 256 MISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDV 315
Query: 241 AEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
A+GLEKAP ALVG+F G+NVGKQ+V VARE
Sbjct: 316 ADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 197 bits (501), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 111/265 (41%), Positives = 154/265 (58%), Gaps = 3/265 (1%)
Query: 4 LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGM 63
+ GV KVL S HP ++ D V G +++ I P+ K+ + PLP Y LGM
Sbjct: 74 MRALGVGKVLVSKHPGFQAGDYVNGALGVQDY-FIGEPKGFYKVDPSRAPLPRYLSALGM 132
Query: 64 PGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKH 123
G+TAY L ++ PK GE V +S A+GAVG + GQ +L GC VVG A EK L
Sbjct: 133 TGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE 192
Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
+ GFD A +YK E DL A L R P+GID++F+NVGG++LD VL + I +CG IS
Sbjct: 193 ELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVLTRIAFKARIVLCGAIS 251
Query: 184 QY-NIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAE 242
QY N E G N + ++ R MEG + D+ ++P+ L+ + + EGKL EDI E
Sbjct: 252 QYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVE 311
Query: 243 GLEKAPSALVGIFTGQNVGKQLVAV 267
GLE P L+ +F+G+N GK ++ V
Sbjct: 312 GLETFPETLLKLFSGENFGKLVLKV 336
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 173 bits (439), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/272 (40%), Positives = 155/272 (56%), Gaps = 15/272 (5%)
Query: 4 LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDT---SVPLPYYTGI 60
+ G V++V++S + + +V + W I + L K+L +PL G
Sbjct: 67 MMGQQVARVVESKNSAFPAGSIVLAQSGWTT-HFISDGKGLEKLLTEWPDKLPLSLALGT 125
Query: 61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
+GMPGLTAY GL E+C K GE V VSAA+GAVG +VGQ KL GC VVG+A S EK+
Sbjct: 126 IGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY 185
Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
LK GFD AFNYK L+ AL + P+G D YF+NVGG+ L+ VL M+ G IA+CG
Sbjct: 186 LKQ-IGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICG 244
Query: 181 MISQYNI--EKPEGVHNLMQVVGKRICMEGFLA----GDFYHQYPKFLELVMLAIKEGKL 234
IS YN + P G + ++ K++ +EGF+ GD K L +M + EGK+
Sbjct: 245 AISVYNRMDQLPPG-PSPESIIYKQLRIEGFIVYRWQGDVRE---KALRDLMKWVLEGKI 300
Query: 235 VYVEDIAEGLEKAPSALVGIFTGQNVGKQLVA 266
Y E + +G E P+A + + G N+GK +V
Sbjct: 301 QYHEHVTKGFENMPAAFIEMLNGANLGKAVVT 332
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 168 bits (426), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 148/269 (55%), Gaps = 11/269 (4%)
Query: 4 LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL--LIKILDTSVPLPYYTGIL 61
+ G V+KV++S + K +V W S+ L L+ ++PL G +
Sbjct: 62 MMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTV 121
Query: 62 GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
GMPGLTAY GL E+C K GE V V+AA+GAVG +VGQ KL GC VVG+ S EKV L
Sbjct: 122 GMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYL 181
Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
K GFD FNYK L+ L + P+G D YF+NVGG+ + V+ M+ G IA+CG
Sbjct: 182 -QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGA 240
Query: 182 ISQYNIEKPEGVHNLMQ-VVGKRICMEGFLA----GDFYHQYPKFLELVMLAIKEGKLVY 236
IS YN P + V+ + + ME F+ GD K L+ ++ + EGK+ Y
Sbjct: 241 ISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALKDLLKWVLEGKIQY 297
Query: 237 VEDIAEGLEKAPSALVGIFTGQNVGKQLV 265
E I EG E P+A +G+ G N+GK +V
Sbjct: 298 KEYIIEGFENMPAAFMGMLKGDNLGKTIV 326
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 168 bits (426), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 148/269 (55%), Gaps = 11/269 (4%)
Query: 4 LSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQL--LIKILDTSVPLPYYTGIL 61
+ G V+KV++S + K +V W S+ L L+ ++PL G +
Sbjct: 83 MMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTV 142
Query: 62 GMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLL 121
GMPGLTAY GL E+C K GE V V+AA+GAVG +VGQ KL GC VVG+ S EKV L
Sbjct: 143 GMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYL 202
Query: 122 KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGM 181
K GFD FNYK L+ L + P+G D YF+NVGG+ + V+ M+ G IA+CG
Sbjct: 203 -QKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGA 261
Query: 182 ISQYNIEKPEGVHNLMQ-VVGKRICMEGFLA----GDFYHQYPKFLELVMLAIKEGKLVY 236
IS YN P + V+ + + ME F+ GD K L+ ++ + EGK+ Y
Sbjct: 262 ISTYNRTGPLPPGPPPEIVIYQELRMEAFVVYRWQGDARQ---KALKDLLKWVLEGKIQY 318
Query: 237 VEDIAEGLEKAPSALVGIFTGQNVGKQLV 265
E I EG E P+A +G+ G N+GK +V
Sbjct: 319 KEYIIEGFENMPAAFMGMLKGDNLGKTIV 347
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 143/279 (51%), Gaps = 12/279 (4%)
Query: 2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVP--LPYYTG 59
Q + G G+ + +S H N K D V + +I L K+ V L Y+ G
Sbjct: 78 QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 137
Query: 60 ILGMPGLTAYGGLHELCSPKKG--EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKE 116
+GMPGLT+ G+ E G + + VS A+GA G + GQ +GC VVG + E
Sbjct: 138 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 197
Query: 117 KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHI 176
K LL + GFD A NYK++ ++ L P G+D+YF+NVGG + D V+ M HI
Sbjct: 198 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 256
Query: 177 AVCGMISQYN--IEKPEGVHNLMQVVGK--RICMEGFLAGDFYHQY-PKFLELVMLAIKE 231
+CG ISQYN + P + ++ + K I E FL ++ ++ P L+L KE
Sbjct: 257 ILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQW-FKE 315
Query: 232 GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
GKL E + GLE +A + TG N+GKQ+V ++ E
Sbjct: 316 GKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 143/279 (51%), Gaps = 12/279 (4%)
Query: 2 QPLSGYGVSKVLDSTHPNYKKDDLVWGLTSWEEFSLIQSPQLLIKILDTSVP--LPYYTG 59
Q + G G+ + +S H N K D V + +I L K+ V L Y+ G
Sbjct: 73 QVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVDPQLVDGHLSYFLG 132
Query: 60 ILGMPGLTAYGGLHELCSPKKG--EYVYVSAASGAVGQLVGQFVKLVGC-YVVGSARSKE 116
+GMPGLT+ G+ E G + + VS A+GA G + GQ +GC VVG + E
Sbjct: 133 AIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHE 192
Query: 117 KVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHI 176
K LL + GFD A NYK++ ++ L P G+D+YF+NVGG + D V+ M HI
Sbjct: 193 KCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHI 251
Query: 177 AVCGMISQYN--IEKPEGVHNLMQVVGK--RICMEGFLAGDFYHQY-PKFLELVMLAIKE 231
+CG ISQYN + P + ++ + K I E FL ++ ++ P L+L KE
Sbjct: 252 ILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQW-FKE 310
Query: 232 GKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
GKL E + GLE +A + TG N+GKQ+V ++ E
Sbjct: 311 GKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 349
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 140/285 (49%), Gaps = 24/285 (8%)
Query: 2 QPLSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEEFSLIQ-------SPQLLIKILDTSVP 53
Q G G+ V +S H K D V W+ +++ PQL+
Sbjct: 74 QVADGGGIGVVEESKHQKLTKGDFVTSFYWPWQTKAILDGNGLEKVDPQLV------DGH 127
Query: 54 LPYYTGILGMPGLTAYGGLHEL--CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVG 110
L Y+ G +GMPGLT+ G+ E S + + VS A+GA G L GQ L+GC VVG
Sbjct: 128 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 187
Query: 111 SARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNM 170
++EK L + GFD A NYK ++ L P G+D+YF+NVGG + +AV+ M
Sbjct: 188 ICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNAVISQM 246
Query: 171 RICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR----ICMEGFLAGDFYHQY-PKFLELV 225
HI +CG ISQY+ + P V R I E F ++ ++ P L+L
Sbjct: 247 NENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLS 306
Query: 226 MLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
KEGKL E +A+GLE A + TG NVGKQ+V ++ +
Sbjct: 307 QW-FKEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQIVCISED 350
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 135/285 (47%), Gaps = 24/285 (8%)
Query: 2 QPLSGYGVSKVLDSTHPNYKKDDLVWGL-TSWEEFSLIQ-------SPQLLIKILDTSVP 53
Q G G+ V +S H K D V W+ +++ PQL+
Sbjct: 84 QVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQLV------DGH 137
Query: 54 LPYYTGILGMPGLTAYGGLHEL--CSPKKGEYVYVSAASGAVGQLVGQFVKLVGC-YVVG 110
L Y+ G +G PGLT+ G+ E S + VS A+GA G L GQ L+GC VVG
Sbjct: 138 LSYFLGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSGAAGACGSLAGQIGHLLGCSRVVG 197
Query: 111 SARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNM 170
++EK L + GFD A NYK ++ L P G+D+YF+NVGG + + V+
Sbjct: 198 ICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREACPGGVDVYFDNVGGDISNTVISQX 256
Query: 171 RICGHIAVCGMISQYNIEKPEGVHNLMQVVGKR----ICMEGFLAGDFYHQY-PKFLELV 225
HI +CG ISQYN + P V R I E F ++ ++ P L+L
Sbjct: 257 NENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLS 316
Query: 226 MLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
KEGKL E +A+GLE A TG NVGKQ+V ++ +
Sbjct: 317 QW-FKEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQIVCISED 360
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 27/251 (10%)
Query: 31 SWEEFSLIQSPQLLIKILDTSVPL--PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSA 88
S+ E++++ + + T VP P Y +L + G TAY L EL +G+ V V+A
Sbjct: 127 SFAEYTVVPAS------IATPVPSVKPEYLTLL-VSGTTAYISLKELGGLSEGKKVLVTA 179
Query: 89 ASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP 148
A+G GQ Q K C+V+G+ S EK LK G D NYK EP + L + +P
Sbjct: 180 AAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTEP-VGTVLKQEYP 237
Query: 149 EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL------MQVVGK 202
EG+D+ +E+VGG M D + + G + V G IS Y + P G+ + +++ K
Sbjct: 238 EGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKK 295
Query: 203 RICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAE--------GLEKAPSALVGI 254
++GF + +Y + ++ G LV D+ + GLE A+ +
Sbjct: 296 SASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYM 355
Query: 255 FTGQNVGKQLV 265
+ G+N GK +V
Sbjct: 356 YMGKNTGKIVV 366
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 27/251 (10%)
Query: 31 SWEEFSLIQSPQLLIKILDTSVPL--PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSA 88
S+ E++++ + + T VP P Y +L + G TAY L EL +G+ V V+A
Sbjct: 119 SFAEYTVVPAS------IATPVPSVKPEYLTLL-VSGTTAYISLKELGGLSEGKKVLVTA 171
Query: 89 ASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP 148
A+G GQ Q K C+V+G+ S EK LK G D NYK EP + L + +P
Sbjct: 172 AAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTEP-VGTVLKQEYP 229
Query: 149 EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL------MQVVGK 202
EG+D+ +E+VGG M D + + G + V G IS Y + P G+ + +++ K
Sbjct: 230 EGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKK 287
Query: 203 RICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAE--------GLEKAPSALVGI 254
++GF + +Y + ++ G LV D+ + GLE A+ +
Sbjct: 288 SASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYM 347
Query: 255 FTGQNVGKQLV 265
+ G+N GK +V
Sbjct: 348 YMGKNTGKIVV 358
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 122/251 (48%), Gaps = 27/251 (10%)
Query: 31 SWEEFSLIQSPQLLIKILDTSVPL--PYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSA 88
S+ E++++ + + T VP P Y +L + G TAY L EL +G+ V V+A
Sbjct: 98 SFAEYTVVPAS------IATPVPSVKPEYLTLL-VSGTTAYISLKELGGLSEGKKVLVTA 150
Query: 89 ASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFP 148
A+G GQ Q K C+V+G+ S EK LK G D NYK EP + L + +P
Sbjct: 151 AAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTEP-VGTVLKQEYP 208
Query: 149 EGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNL------MQVVGK 202
EG+D+ +E+VGG M D + + G + V G IS Y + P G+ + +++ K
Sbjct: 209 EGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGY--QTPTGLSPVKAGTLPAKLLKK 266
Query: 203 RICMEGFLAGDFYHQYPKFLELVMLAIKEGKLVYVEDIAE--------GLEKAPSALVGI 254
++GF + +Y + ++ G LV D+ + GLE A+ +
Sbjct: 267 SASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYM 326
Query: 255 FTGQNVGKQLV 265
+ G+N GK +V
Sbjct: 327 YMGKNTGKIVV 337
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
L + G+TA LH+ K G+YV + AA+G +G ++ + + +G V+G+ ++EK +
Sbjct: 126 LMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAET 185
Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
+ K G NY + + +G+D+ ++++G L L +R G A G
Sbjct: 186 AR-KLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYG 244
Query: 181 MIS 183
S
Sbjct: 245 HAS 247
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Query: 56 YYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSK 115
Y G+L + LTA +E KKG+YV + AA+G VG ++ Q +K+ G + + A +
Sbjct: 126 YAAGLLQV--LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183
Query: 116 EKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGH 175
EK+ + K +G + N +E L L +G+D F++VG + L ++ G
Sbjct: 184 EKLKIAKE-YGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGV 242
Query: 176 IA----VCGMISQYNIEK 189
G+I ++I +
Sbjct: 243 FVSFGNASGLIPPFSITR 260
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
LTA+ LH + + + G+YV + A VG Q ++ G + +A S++K+ + K
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MAEKL 206
Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQY 185
G FNYK+E +A L G+++ + +GG + + + + G + G++
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266
Query: 186 NIEKP 190
+I P
Sbjct: 267 DINGP 271
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
LTA+ LH + + + G+YV + A VG Q ++ G + +A S++K+ + K
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQ-MAEKL 190
Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQY 185
G FNYK+E +A L G+++ + +GG + + + + G + G++
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 250
Query: 186 NIEKP 190
+I P
Sbjct: 251 DINGP 255
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 1/120 (0%)
Query: 61 LGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDL 120
+G+P TAY L K GE V V ASG VG Q + G ++G+A ++E +
Sbjct: 151 IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 210
Query: 121 LKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCG 180
+ G + FN++E +D +GIDI E + L L + G + V G
Sbjct: 211 VLQN-GAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 65 GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
GLTA+ L E + G+ V V +G V Q K G V+ ++ S+EK+D
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 125 FGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQ 184
G D N EE ++ G D E GG L L + G I+V G++
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 185 YNIEKPEG 192
+ + P G
Sbjct: 292 FEVSGPVG 299
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 85/220 (38%), Gaps = 30/220 (13%)
Query: 67 TAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFG 126
TAY L + GE V + + SG VGQ GC V + S EK L+ +F
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARF- 1712
Query: 127 FDDAFNYKEEPDLDAALNRCFPEGIDIYFE-----NVGGKMLDAVLLNMRICGHIAVCGM 181
P LD CF D FE + GK +D VL ++ A
Sbjct: 1713 ----------PQLD---ETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRC 1759
Query: 182 ISQYNIEKPEGVHNL-------MQVVGKRICMEGFLAGDFYHQ----YPKFLELVMLAIK 230
++Q+ G +L M V K + G L + + + + EL+ I+
Sbjct: 1760 LAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQ 1819
Query: 231 EGKLVYVEDIAEGLEKAPSALVGIFTGQNVGKQLVAVARE 270
EG + ++ K +A + G+++GK ++ V E
Sbjct: 1820 EGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859
>pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
pdb|1XA0|B Chain B, Crystal Structure Of Mcsg Target Apc35536 From Bacillus
Stearothermophilus
Length = 328
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 82/209 (39%), Gaps = 42/209 (20%)
Query: 12 VLDSTHPNYKKDDLVW------GLT---SWEEFSLIQSPQLLIKILDTSVPLPY-----Y 57
V+ S HP +++ D V G+T + E++ + L VPLP
Sbjct: 72 VVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWL--------VPLPKGLTLKE 123
Query: 58 TGILGMPGLTAYGGLHEL----CSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSAR 113
+G G TA +H L +P++G V V+ A+G VG L + G V S
Sbjct: 124 AXAIGTAGFTAALSIHRLEEHGLTPERGP-VLVTGATGGVGSLAVSXLAKRGYTVEASTG 182
Query: 114 SKEKVDLL-----KHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLL 168
+ D L K +D + P LD + + +D VGG+ L VL
Sbjct: 183 KAAEHDYLRVLGAKEVLAREDVXAERIRP-LD---KQRWAAAVD----PVGGRTLATVLS 234
Query: 169 NMRICGHIAVCGMISQYNIEKPEGVHNLM 197
R G +AV G+ E P VH +
Sbjct: 235 RXRYGGAVAVSGLTG--GAEVPTTVHPFI 261
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/168 (18%), Positives = 69/168 (41%), Gaps = 14/168 (8%)
Query: 31 SWEEFSLIQSPQLLIKILDTSVPLP-----YYTGILGMPGLTAYGGLHELCSPKKGEYVY 85
+W+E+ + D VP+P + + + LTA+ E + ++ + +
Sbjct: 98 TWQEYVKTSA--------DFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLL 149
Query: 86 VSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNR 145
V+A A+G L Q +++ ++ R+ + + L + G + P + +
Sbjct: 150 VNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDTSTAPLYETVMEL 208
Query: 146 CFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGV 193
G D +++GG + + ++R GH G++S + E V
Sbjct: 209 TNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLSGIQVNWAEIV 256
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 49 DTSVPLP-----YYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKL 103
D VP+P G+ LTA+ L E+ GE V + +A+G VG K+
Sbjct: 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM 61
Query: 104 VGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKML 163
+G + +A S K ++L + G + + + D L G+D+ ++ G+ +
Sbjct: 62 IGARIYTTAGSDAKREMLS-RLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAI 120
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGC--YVVGSARSKEKVDLLKH 123
LTAY L +L + GE + V +A+G VG Q + +G Y S + V+L +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSRE 390
Query: 124 KFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVL 167
+++++ L G+D+ ++ G+ DA L
Sbjct: 391 HLASSRTCDFEQQ-----FLGATGGRGVDVVLNSLAGEFADASL 429
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 8/100 (8%)
Query: 63 MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK 122
M +TAY L E+ + ++G V V +A G VGQ V Q V V S K + +K
Sbjct: 125 MNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKHEAIK 184
Query: 123 HKFG--FDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGG 160
FD +Y +E + R EG+DI + + G
Sbjct: 185 DSVTHLFDRNADYVQE------VKRISAEGVDIVLDCLCG 218
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 33/186 (17%)
Query: 26 VWGLTS----WEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSP--- 78
+WG + E +L++S QL+ K P PGL +L S
Sbjct: 171 IWGFETNFGGLAEIALVKSNQLMPK------PDHLSWEEAAAPGLVNSTAYRQLVSRNGA 224
Query: 79 --KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN---- 132
K+G+ V + ASG +G QF G + S +K ++ + G + +
Sbjct: 225 GMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-AMGAEAIIDRNAE 283
Query: 133 ----YKEEPDLDAALNRCF---------PEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
+K+E D + F E IDI FE+ G + A + R G I C
Sbjct: 284 GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTC 343
Query: 180 GMISQY 185
S Y
Sbjct: 344 ASTSGY 349
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 44 LIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKL 103
L+K+ D SV ++ + GLT L + K GE + AA+G VG L Q+ K
Sbjct: 106 LVKLAD-SVSFEQAAALM-LKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKA 163
Query: 104 VGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEE 136
+G ++G+ S EK K G + +Y E
Sbjct: 164 LGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE 195
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 28 GLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVS 87
GL +W ++ S + LI++ + +PL LG+ TAY L + + G+ V +
Sbjct: 105 GLGTWRTEAVF-SEEALIQV-PSDIPL-QSAATLGVNPCTAYRMLMDFEQLQPGDSVIQN 161
Query: 88 AASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF 147
A++ VGQ V Q +G + R + + L + A + E +L + F
Sbjct: 162 ASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNF 221
Query: 148 PEGI---DIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI 204
+ + + VGGK +L + G + G +++ + V ++ ++ K +
Sbjct: 222 FKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPV-----VASVSLLIFKDL 276
Query: 205 CMEGFLAGDFY--HQYPKFLELVML---AIKEGKLV 235
+ GF + H +F EL++ I+ G+L
Sbjct: 277 KLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLT 312
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 28 GLTSWEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSPKKGEYVYVS 87
GL +W ++ S + LI++ + +PL LG+ TAY L + + G+ V +
Sbjct: 118 GLGTWRTEAVF-SEEALIQV-PSDIPL-QSAATLGVNPCTAYRMLMDFEQLQPGDSVIQN 174
Query: 88 AASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCF 147
A++ VGQ V Q +G + R + + L + A + E +L + F
Sbjct: 175 ASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNF 234
Query: 148 PEGI---DIYFENVGGKMLDAVLLNMRICGHIAVCGMISQYNIEKPEGVHNLMQVVGKRI 204
+ + + VGGK +L + G + G +++ + V ++ ++ K +
Sbjct: 235 FKDMPQPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQPV-----VASVSLLIFKDL 289
Query: 205 CMEGFLAGDFY--HQYPKFLELVML---AIKEGKLV 235
+ GF + H +F EL++ I+ G+L
Sbjct: 290 KLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQLT 325
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
+TA+ GL + + G+ V + G VG + Q G V +AR DL +
Sbjct: 136 ITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGS---DLEYVRD 192
Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
+ EP+ D A +G D+ ++ +GG +LDA ++ GH+ C
Sbjct: 193 LGATPIDASREPE-DYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSC 245
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 35.4 bits (80), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 69/186 (37%), Gaps = 33/186 (17%)
Query: 26 VWGLTS----WEEFSLIQSPQLLIKILDTSVPLPYYTGILGMPGLTAYGGLHELCSP--- 78
+WG + E +L+++ QL+ K P PGL +L S
Sbjct: 189 IWGFETNFGGLAEIALVKTNQLMPK------PKHLTWEEAAAPGLVNSTAYRQLVSRNGA 242
Query: 79 --KKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFN---- 132
K+G+ V + ASG +G QF G + S +K ++ + G + +
Sbjct: 243 AMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICR-SMGAEAIIDRNAE 301
Query: 133 ----YKEEPDLDAALNRCF---------PEGIDIYFENVGGKMLDAVLLNMRICGHIAVC 179
+K+E D + F E IDI FE+ G + A + R G I C
Sbjct: 302 GYKFWKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVYVTRKGGTITTC 361
Query: 180 GMISQY 185
S Y
Sbjct: 362 ASTSGY 367
>pdb|1TT7|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1TT7|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp
pdb|1Y9E|A Chain A, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|B Chain B, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|C Chain C, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|D Chain D, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|E Chain E, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
pdb|1Y9E|F Chain F, Crystal Structure Of Bacillus Subtilis Protein Yhfp With
Nad Bound
Length = 330
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
Query: 49 DTSVPLPYY-----TGILGMPGLTAYGGLHEL----CSPKKGEYVYVSAASGAVGQLVGQ 99
D VPLP + G G TA +H L SP+KG + A G G V
Sbjct: 111 DWLVPLPQNLSLKEAXVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSX 170
Query: 100 FVKLVGCYVVGSARSKEKVDLLKHKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159
K G VV S ++E D LK G + + E D L + + VG
Sbjct: 171 LNKR-GYDVVASTGNREAADYLKQ-LGASEVIS--REDVYDGTLKALSKQQWQGAVDPVG 226
Query: 160 GKMLDAVLLNMRICGHIAVCGM 181
GK L ++L ++ G +AV G+
Sbjct: 227 GKQLASLLSKIQYGGSVAVSGL 248
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 63 MPGLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLK 122
+ GLT Y L + K E AA+G VG + Q+ K +G ++G+ + +K
Sbjct: 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ-SA 181
Query: 123 HKFGFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159
K G NY+EE ++ + + + +++VG
Sbjct: 182 LKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVG 218
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 38/218 (17%)
Query: 65 GLTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHK 124
G+T Y L + G +V +S A+G +G L Q+ K +G V+G + K +L +
Sbjct: 155 GITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S 212
Query: 125 FGFDDAFNYKEEPDLDAALNRCFPEGID-IYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
G + ++ +E D+ A+ + G + +V ++A +R G + GM +
Sbjct: 213 IGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPA 272
Query: 184 QYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYPKFLELV--MLAIKEGKLVYVEDIA 241
G + C D ++Q K + +V + + ++ A
Sbjct: 273 -----------------GAKCC------SDVFNQVVKSISIVGSYVGNRADTREALDFFA 309
Query: 242 EGLEKAPSALVGIFT----------GQNVGKQLVAVAR 269
GL K+P +VG+ T GQ VG+ +V ++
Sbjct: 310 RGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDTSK 347
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 30.8 bits (68), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 50/125 (40%), Gaps = 20/125 (16%)
Query: 79 KKGEYVYVSAASGAVGQLVGQFVKLVG---CYVVGSARSKEKVDLL-------KHKFGFD 128
K+G+ V + ASG +G QFVK G VV SA+ + V L + + G
Sbjct: 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGIT 278
Query: 129 DAFNYKEEPDLDAALNRCFPEGI--------DIYFENVGGKMLDAVLLNMRICGHIAVCG 180
D + ++P R + + DI FE+ G ++ R G + CG
Sbjct: 279 D--DIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCG 336
Query: 181 MISQY 185
S Y
Sbjct: 337 SSSGY 341
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
LTAY L + GE V V AA+GA+G Q + +G V+ +A EK+ L
Sbjct: 112 LTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159
G ++A Y E P+ A G+D+ E G
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLEVRG 198
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 7/94 (7%)
Query: 66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
LTAY L + GE V V AA+GA+G Q + +G V+ +A EK+ L
Sbjct: 112 LTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159
G ++A Y E P+ A G+D+ E G
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLEVRG 198
>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|C Chain C, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
pdb|1O5I|D Chain D, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein)
Reductase (Tm1169) From Thermotoga Maritima At 2.50 A
Resolution
Length = 249
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 24/156 (15%)
Query: 84 VYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF-------GFDDAFNYKEE 136
V V AAS +G+ V + G V AR++E + H++ D F +E
Sbjct: 22 VLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKE 81
Query: 137 PDL-------------DAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
D+ D N F E ID F N+ K++ L M+ G + I+
Sbjct: 82 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNM-IKIVRNYLPAMKEKGWGRIVA-IT 139
Query: 184 QYNIEKPEGVHNLMQVVGKRICMEGFLAGDFYHQYP 219
+++ P + NL R+ + GFL + P
Sbjct: 140 SFSVISP--IENLYTSNSARMALTGFLKTLSFEVAP 173
>pdb|4GPS|A Chain A, Crystal Structure Of K. Lactis Dxo1 (Ydr370c)
pdb|4GPU|A Chain A, Crystal Structure Of K. Lactis Dxo1 (Ydr370c) In Complex
With Manganese
Length = 423
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 188 EKPEGVHNLMQVVGKRICMEGFLAGDFYHQYP 219
+KP G+H K+IC GF D + P
Sbjct: 219 DKPNGIHETRNSFNKKICYTGFALEDLLIESP 250
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
LTAY L + GE V V AA+GA+G Q + G V+ +A EK+ L
Sbjct: 112 LTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLA-LPLAL 169
Query: 126 GFDDAFNYKEEPDLDAALNRCFPEGIDIYFENVG 159
G ++A Y E P+ A G+D+ E G
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLEVRG 198
>pdb|3IUP|A Chain A, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
pdb|3IUP|B Chain B, Crystal Structure Of Putative Nadph:quinone Oxidoreductase
(Yp_296108.1) From Ralstonia Eutropha Jmp134 At 1.70 A
Resolution
Length = 379
Score = 28.5 bits (62), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Query: 66 LTAYGGLHELCSPKKGEYVYVSAASGAVGQLVGQFVKLVGCYVVGSARSKEKVDLLKHKF 125
LTA G + V+ +AAS +GQ + Q G +V R +E+ DLLK +
Sbjct: 158 LTALGXVETXRLEGHSALVHTAAASN-LGQXLNQICLKDGIKLVNIVRKQEQADLLKAQG 216
Query: 126 GFD--DAFNYKEEPDLDAALNRCFPEGIDIYFENVGGKMLDAVLLNMRICGHIAVCGMIS 183
+A + DL AL G I F+ GG L +L C A+
Sbjct: 217 AVHVCNAASPTFXQDLTEAL---VSTGATIAFDATGGGKLGGQILT---CXEAALNKSAR 270
Query: 184 QYN 186
+Y+
Sbjct: 271 EYS 273
>pdb|4A7P|A Chain A, Se-Met Derivatized Ugdg, Udp-Glucose Dehydrogenase From
Sphingomonas Elodea
pdb|4A7P|B Chain B, Se-Met Derivatized Ugdg, Udp-Glucose Dehydrogenase From
Sphingomonas Elodea
Length = 446
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 219 PKFLELVMLAIKEGKLVYVEDIAEGLEKAPSALVGIFTGQNVG 261
P LV +K G+L + D+AEG++ A + + + T G
Sbjct: 57 PGLDALVASNVKAGRLSFTTDLAEGVKDADAVFIAVGTPSRRG 99
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.141 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,666,677
Number of Sequences: 62578
Number of extensions: 380362
Number of successful extensions: 954
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 882
Number of HSP's gapped (non-prelim): 50
length of query: 270
length of database: 14,973,337
effective HSP length: 97
effective length of query: 173
effective length of database: 8,903,271
effective search space: 1540265883
effective search space used: 1540265883
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)